LOCUS       DATMQB010000001        11310 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1240324, whole genome shotgun sequence.
ACCESSION   DATMQB010000001 DATMQB010000000
VERSION     DATMQB010000001.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11310)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11310)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11310
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1240324"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..360)
                     /locus_tag="VNY79_00005"
     CDS             complement(<1..360)
                     /locus_tag="VNY79_00005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HWX70857.1"
                     /translation="MGRLDNKVAIVTGAASGIGRASAILFAREGARLVIVDQNAEGLA
                     ETAKLIAKDGGSAQAMTADTGREEDVKGFVKRALDSFGALDAIYANAGVSGGLVPLFE
                     QTVEQWQQILQTNLIGPF"
     gene            complement(406..984)
                     /locus_tag="VNY79_00010"
     CDS             complement(406..984)
                     /locus_tag="VNY79_00010"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HWX70858.1"
                     /translation="MVVLNKIYTRTGDDGTTALGTGERRKKYDLRIAAYGTLDETNSV
                     IGIARLHTAEDAALDAALSRIQNDLFDVGADLTTPGKGKGPGGARLTVTAAQVDWLEA
                     EIDRLNDELEPLRSFILPGGSAAAAYLHLARTVCRRAERLIAELSDRPDESVTREVLK
                     YVNRLSDFLFVAARHANGKGARDVLWKPGQNR"
     gene            complement(1002..1196)
                     /locus_tag="VNY79_00015"
     CDS             complement(1002..1196)
                     /locus_tag="VNY79_00015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin transmembrane helix small protein"
                     /protein_id="HWX70859.1"
                     /translation="MAGFLSHALVPIAIGAVAVVLLLGLINMMRGGSGNTSQKLMRLR
                     VLLQFIAIVVIMFTIWVMAR"
     gene            complement(1433..3109)
                     /locus_tag="VNY79_00020"
     CDS             complement(1433..3109)
                     /locus_tag="VNY79_00020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX70860.1"
                     /translation="MPLAASSAPAGHDVAATLHQAVQAAEALLADAQRAVAQRVMNDG
                     RAIPRSFDREQRATHGLAWLATYVEALRQLAAYAERLAADGNFGEVEQLLVHIGAGEY
                     LAQILGGIPMSQNEIVRLADLGLAPSAVAARVTPAVERLIAAGNTAPRRARLAELMRQ
                     RPEATVGTCGLDETLDSIREEMRKFADGQVVPHAQQWHLRNHYIPLDVIAQMSELGVF
                     SLTIPEDYGGMGLGKESMCVVSEELARGYIGVGSLGTRSEIAAELILGSGTEEQKRKW
                     LPKIASGEVLPTAVFTEPNTGSDLASLKTRAVRHGDTYKVYGNKTWITHPVRADLMTL
                     LVRTNQAEKGYRGLSMLLAEKPRGSDADPFPARGMSGTEIEVLGYRGMKEYEIAFDGF
                     AVKAENLLGGVEGLGFKQLMATFESARIQTAARAVGVAQAALEEALGYATTREQFGEP
                     IANFPRVADKLALMAAEIMIARQLTYYAARQKDSGRRCDLEAGMAKLLAARVAWAAAD
                     NAVQIHGGNGFALEFPVSRLLCDARILSIFEGAAEIQANVIARRLLDGSN"
     gene            complement(3260..4972)
                     /locus_tag="VNY79_00025"
     CDS             complement(3260..4972)
                     /locus_tag="VNY79_00025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012454777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005247 - voltage-gated chloride channel
                     activity [Evidence IEA];
                     GO_process: GO:0006821 - chloride transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HWX70861.1"
                     /translation="MVRARESSLIALAALVGAIAGLVVAAMSTGVDVLHQLLFRLDPG
                     ERLSGLLRLDPVVALTVPLAGGAVFGIATELIARWRPEREIDPIEANALHGGRMSLLG
                     SIIVAAQTVWSSGVGASVGLEAGYTQLGGGIASRLGMAFRLRRADLRILVGCGAAGGI
                     AGAFGAPLAGAFYGFELIIGGYSPNSLAPVAAAALIGFLVAHALAPADIGVVAPERMA
                     VGVHDLVIAATIGLLAAALGILLMRGVALCETLFVRLRVRPALRTTIGGLVVGLLAMV
                     TPQVLSSGHGALRLSGVFTLSLWTVASILVLKIAASIVSLGSGFRGGLFFSSLLMGAL
                     GGDLLAIALTMAWPSGHFDPNAYALIGMSALSASVVGGPLTMTFIALETTGDLWLTTA
                     VLIAVIISAQMTREVFGYSFATWRFHLRGETIRSAADIGWMRELTVGKMMRRDIRTAA
                     AAGTIAAFRDAFPVGSTTYVIAVDDDKRYAGMVRVADAHAAEVSPGEAVRDLLHSAND
                     MLLPGMAIKDAVLAFDRAEAESLPVVDSYLDRRVVGLLTEAHALRRYSAELERRRQEL
                     IGKG"
     gene            5280..6650
                     /locus_tag="VNY79_00030"
     CDS             5280..6650
                     /locus_tag="VNY79_00030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sorbosone dehydrogenase family protein"
                     /protein_id="HWX70862.1"
                     /translation="MPHLIHAIVAAAAAAAVVGAALPLLAETGATRLEGKAAFGDWRL
                     DKPGTRRLIRPQDLPAGDQAGSATDFLYPVRRSEQQKPAVPTGFEVTLLASGLSHQRL
                     IRVAPNGDVFAAESETGRVRVLRPNPGQPASASVFADGLRGPFGIAFYPPGRDPEWVY
                     VGNTDSVVRFAYRSGDLKARAPAETVVPHLPTGGSHRTRDVVFSPDGRTMYVSVGSAS
                     NVGDAMGKLSTSELQAWQSTHALGAAWGNETDRAAVLAFDPQGKNGHIFATGIRNCVG
                     MAVAPGSGELWCSTNERDGLGDNVPSDYVTRVREGAFYGWPWYYIGANEDPRRRGERP
                     DLKDKITVPDVLIQAHSASLQMTFYEGTQFPAEYRGNIFAAEHGSWNRSKPTGYKVIR
                     IIVKDGVPTGEYEDFATGFVIDDRELWGRPVGVAVDNDGALLLSEDAGGTIWRITYSG
                     NAAQAR"
     gene            6756..7859
                     /locus_tag="VNY79_00035"
     CDS             6756..7859
                     /locus_tag="VNY79_00035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HWX70863.1"
                     /translation="MTDRLTRVLLAGVLVLLAAIFAQPYINESLFSSRSPRPIEARGS
                     LAEAERTTIAIFNAVSPSVLQVIGHSASQEQVTPEGDQVVGVQTGTGFVWDEAGHIVT
                     NNHVLQGTSAIDVRTPAGDIVAAKVIGTAPSYDLAVVRLRDSRQLSKPIAIGSSADLQ
                     VGQWAFAIGNPFGLDHSLTTGVISALRRRLPTSEGRELADVIQTDAAINPGNSGGPLL
                     DSAGRLIGVTTAILSPSGSNAGIGFAIPVDAVNKVVPQLIKNGRVPTPGIGVIIASDE
                     AASQLGTDGVVVVRVVPDSPAAKAGLRGVDPSSGAMGDVIVGANGVQVHRLADLTDQI
                     EKIGIGNEIGLKVQRDGRTIPVSVGVEDTSKAS"
     gene            8043..9572
                     /locus_tag="VNY79_00040"
     CDS             8043..9572
                     /locus_tag="VNY79_00040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HWX70864.1"
                     /translation="MVQARKASPHPDSPHPPLSGAVKPRGQPTIAATATQTGIVVETD
                     IPARLDALPVGRFHILVIVALGITWILDGLEVTLAGALSGELTQSSGLGLSNAQIGIA
                     GSSYLCGAVLGAFFFGWLTDRLGRKKLFFITLAVYLTATAATGFSWDVWSFVVFRFLT
                     GTGIGGEYTAINSTIQELIPARLRGWTDLLINGSFWIGAALGAGGSIVLLNPAFIDPG
                     LGWRLAFLIGALIGLIILLMRRWIPESPRWLMTHGSVAEAEAVVRGIEARVGVGGRDV
                     TPAPRVRLRMRDHTPLGEVARALFVTYPERTVVGLTLMAAQAFFYNAIFFTYALILTN
                     FYGTPADQVGWYILPFAAGNVLGPVLLGRLFDTVGRKVMIALTYAMSGILLALTGYLF
                     SRNLLTAQALTACWTCVFFFASAAASSAYLTVSETFPLEMRALAIAFFYAIGTGAGGI
                     GGPLLFGVLISTGSRGNVAIGYAIGAALMLFAAAVEVRFGVAAERKPLEAVSRPLSFI
                     D"
     gene            9618..10379
                     /gene="otsB"
                     /locus_tag="VNY79_00045"
     CDS             9618..10379
                     /gene="otsB"
                     /locus_tag="VNY79_00045"
                     /EC_number="3.1.3.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004805 - trehalose-phosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose-phosphatase"
                     /protein_id="HWX70865.1"
                     /translation="MEIANTSLASDLRECAILLDIDGTILDIAPAPQEVWVPPALRHT
                     LGRLQELTGGAVALVSGRPLDDIDLIFAPLQLAAIGGHGAEMRPVPGTVPQTRVGSLS
                     AELKRKLATITELGRGILVEDKGYSLALHYRLAPEHGPALRAAVAHVCAQLPAGSVEI
                     LPGKLVVEVKPSGVSKALAVSELMTYPPFADRHPIFIGDDTTDEPVFAVIPRFGGLGF
                     SVGRVVPGVNGHFDKPEDVRSWLARIVADHGDSAG"
     gene            10376..>11310
                     /locus_tag="VNY79_00050"
     CDS             10376..>11310
                     /locus_tag="VNY79_00050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009797876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalase-like domain-containing protein"
                     /protein_id="HWX70866.1"
                     /translation="MMTGHGLDLAVIGNGRTAALVDPTARIVWWCYPRFDGDPIFCRL
                     LAGKQEKGFSDVVLDDMAEFQSEYMRNTAIVSTVLTDRNGGKVQITDFVPRFRQFGRV
                     FRPPQLYRIVEPVAGLPRITIRMRPASDYGKPLTNHSLGSNHIRYSAEGTVIRLTTDA
                     PLSLIESEAPFVLTRPVHLVFGPDEPFQGDLSSTCREFAERTHDYWVEWVRRLSISVD
                     WQEAIIRAAITLKLSNFDETGAVIAAHTTSIPEAPGSGRTWDYRYCWLRDAYFVVQAL
                     NRIGATRTMEEFISFTLSIVSKPDQELRPLYSVVPT"
BASE COUNT         1875 a         3873 c         3701 g         1861 t
ORIGIN      
        1 gaacgggccg atgagattgg tctgcaggat ctgctgccat tgctcgaccg tctgctcgaa
       61 cagcggcaca agaccgccgc tgaccccggc attggcgtag atcgcatcga gcgcgccgaa
      121 gctgtcgagc gcacgcttga cgaaaccctt gacgtcctct tcgcggccgg tgtcggcggt
      181 catcgcttgc gcactgccgc cgtccttggc gatgagcttc gccgtctccg ccaatccctc
      241 cgcattctga tcgacaatca ccagccgtgc gccttcgcgc gcaaacagga tcgcgctggc
      301 gcggccgatg ccgctcgccg cgccagtgac gatggcgacc ttgttgtcga gccggcccat
      361 aaatcctccc aataagaatc cccctggtaa tccccggttc tttgttcagc ggttctgtcc
      421 gggcttccac agcacgtcgc gcgcgccctt gccgttggcg tgacgggcgg cgacgaacag
      481 gaaatcggac agccgattga cgtatttcag cacttcccgc gtgacgctct cgtccggcct
      541 gtcgctgagc tcggcaatca accgctcggc ccgccggcac acggtgcggg cgaggtggag
      601 ataggcggcc gccgcgctcc ctcccggcag gatgaaggat cgcagcggct cgagctcgtc
      661 attgagccgg tcgatctcgg cctcgagcca atcgacctgc gccgcggtga ccgtaagccg
      721 cgcgccgccc ggccccttgc ccttgccggg cgtggtgaga tcggcgccga cgtcgaacag
      781 gtcgttctgg atgcgcgata gcgccgcgtc gagcgcggca tcctccgcgg tatgcagccg
      841 cgcgatgccg atcacggaat tcgtctcatc gagcgtgccg taggcggcga tgcgcagatc
      901 gtatttcttg cgccgctcgc cggtgccgag cgcggtcgtg ccgtcatcgc cggtgcgggt
      961 gtagatcttg ttgaggacga ccatgcctgc ttcgctcgcg cctagcgcgc catgacccag
     1021 atcgtgaaca tgatgacgac gatagcgatg aactgcagca gcacgcgcag ccgcatcagc
     1081 ttctgcgagg tgttgccgga gccgccgcgc atcatgttga tgaggccgag cagcagcacc
     1141 accgcgaccg cgccgatcgc gatcgggaca agggcatggg agaggaaccc ggccattcac
     1201 gcaatgtagc ccggatggcg cgaaagcgaa atccgggatt ggctttggcg gcgttgtgac
     1261 gctctgagca cggcgtgcgc acgtgtggcg cgacgatctg gagcaaatca tcacctttcc
     1321 gccgggtgcg acggccgacc aggttatcga acgcatgatt gcgattttgc aagctgccgt
     1381 gccccggtaa ttcaacaaag acccgcggga cacgcccggc ggcggttcgg tttcagttcg
     1441 acccgtccaa cagccgccgc gcgatcacat tcgcctgaat ctcggcggcg ccttcgaaaa
     1501 tgctcaggat gcgggcgtcg cagagaaggc gcgagaccgg gaattcgagc gcgaagccgt
     1561 tgccgccgtg gatctgcacg gcgttgtcgg cggcagccca ggcgacgcgc gcggcgagga
     1621 gcttggccat gccggcctcg aggtcgcagc ggcggccgga atccttctgc cgcgccgcgt
     1681 aataggtgag ctggcgcgcg atcatgatct cggccgccat cagcgcgagc ttgtcggcga
     1741 cgcgcgggaa attcgcgatc ggctcgccga actgctcccg cgtcgtcgcg tagccgagcg
     1801 cctcttcgag cgccgcctgc gccacgccga cggcgcgcgc cgcggtctgg atgcgcgccg
     1861 attcgaaggt cgccatcagc tgcttgaagc caagaccctc gacaccgccg aggagatttt
     1921 ccgccttcac ggcgaagccg tcgaaggcga tctcgtattc cttcatgccg cggtagccca
     1981 gaacctcgat ctcggtgccg gacatgccgc gcgccgggaa cgggtccgcg tcgctgccgc
     2041 gcggcttctc ggcgagcagc atggagaggc cgcgatagcc cttctccgcc tggttggtgc
     2101 gcacgagcag cgtcatcagg tcggcgcgca ccggatgcgt gatccaggtc ttgttgccgt
     2161 agaccttata agtatcgccg tgccttacgg cgcgcgtctt caaggaggcg aggtcggagc
     2221 cggtattcgg ctcggtgaac accgccgtcg gcagcacctc gccggaggcg atcttcggca
     2281 gccatttgcg tttctgctcc tcggtgccgc tgccgaggat aagctcggcg gcgatctcgg
     2341 agcgggtgcc gaggctgccg acgccgatgt agccgcgcgc gagttcctcg gagacgacgc
     2401 acatcgattc cttgccgagc cccatgccgc cgtaatcctc ggggatggtc aggctgaaca
     2461 cgccgagctc cgacatctgc gcgatgacgt cgagcgggat gtagtggttg cgcaggtgcc
     2521 attgctgcgc gtgcggcacg acctggccgt cggcgaactt gcgcatctcc tcgcggatcg
     2581 aatcgagcgt ctcgtcgagg ccgcaggtcc cgaccgtcgc ttccgggcgc tggcgcatca
     2641 gctcggcgag gcgcgcgcgg cgcggcgcgg tgttgccggc ggcgatgagg cgctccaccg
     2701 ccggcgtcac gcgcgctgcc acggccgatg gcgcgaggcc gagatcggca aggcgcacga
     2761 tctcgttctg actcatggga atgccgccga gaatctgcgc cagatattcg ccggcgccga
     2821 tgtgcaccag gagttgctcg acctcgccga agttgccgtc cgcggcgagg cgctcggcat
     2881 aggcggcgag ctggcggagc gcttcgacat aggtcgcgag ccaggcgagg ccgtgggtcg
     2941 cgcgctgctc gcggtcgaag ctgcgcggga tcgcgcggcc atcgttcatc acccgctgcg
     3001 ccaccgcccg ctgcgcatcc gccagcaggg cctcggccgc ctgcaccgcc tgatgcaacg
     3061 tcgccgccac gtcgtggccg gccggcgcag aagatgcggc aaggggcatg agcgggctcc
     3121 gatcacctcg attcaacaat cccggaggct acgaccttac gcgtgcggtg cacaaaagca
     3181 atcgagaccc acgctcccaa cattgcggcg tgaaagattt aggcgagatc cgcgccgtcg
     3241 acgggaacgc cgtgcgctcc taacccttgc cgataagctc ctgccgccgc cgctccagct
     3301 cggccgagta gcggcgcagc gcatgggcct cggtgaggag cccgacgacc cggcgatcga
     3361 ggtaggaatc gacgaccgga agcgactcag cctcggcgcg gtcgaaggcg agcaccgcat
     3421 ccttgatcgc catgcccggc agcagcatgt cgttcgccga gtggagcagg tcccgcaccg
     3481 cctcgccggg cgagacttcg gcggcatggg catcggcgac gcggaccatg cccgcatagc
     3541 gtttgtcgtc gtcgaccgcg atcacgtagg tggtcgagcc cacgggaaag gcgtcgcgga
     3601 aggcagcgat ggtgccggcc gccgccgcgg tccgtatgtc gcggcgcatc atcttgccga
     3661 cagtgagttc gcgcatccag ccgatgtcgg cggcgctgcg gatggtctcg ccgcgcagat
     3721 ggaagcgcca ggtggcgaac gaatagccga agacctcccg cgtcatctgc gcggagatga
     3781 tcacggcgat gagcaccgcc gtggtcagcc agaggtcgcc ggtcgtctcg agcgcgatga
     3841 acgtcatggt cagcggtccg ccgaccaccg aggccgacag cgcgctcatg ccgatcagcg
     3901 cgtaggcgtt gggatcgaag tggccgctcg gccacgccat ggtcagcgcg atcgccagga
     3961 gatcgccgcc gagcgcgccc atgagcagcg aggagaagaa caggccgccg cggaatccgg
     4021 agccgagcga gacaatcgac gcggcaatct tgagcaccaa gatcgacgcc acggtccaca
     4081 gcgacagcgt gaacacgccg gaaagacgca gcgcgccgtg acccgacgac agcacctgcg
     4141 gcgtcaccat cgccagcagg ccgacgacga ggccgccgat cgtggtgcgc aaggccggcc
     4201 gcacccgcag ccgcacgaac agcgtttcgc acagcgcgac cccgcgcatg agcagaattc
     4261 cgagcgccgc ggcgaggagg ccgatggtcg cggcgatgac caaatcgtgg acccccacgg
     4321 ccatccgctc cggcgcgacg acgccgatgt cggcgggcgc gagcgcatgc gccaccaaaa
     4381 agccgatcag cgccgcggcg gcgaccggcg ccaggctgtt tggcgaatag ccgccgatga
     4441 taagctcgaa gccgtagaac gcgccagcga gcggggcgcc gaaggcgccg gcgatgccgc
     4501 cagcggcgcc gcagccgacc aggatgcgca ggtcggcgcg gcgcagccga aacgccatgc
     4561 cgaggcgcga ggcgatgccg ccgccgagct gcgtatagcc ggcctcgagg ccgaccgagg
     4621 cgccgacgcc gctcgaccac accgtctgcg cggcgacgat gatgctgccg agaagcgaca
     4681 tgcggccgcc atgcaacgca ttcgcctcga tcggatcgat ttcccgctcc ggccgccagc
     4741 gcgcgatcag ctccgtcgcg atgccgaaaa cggcgccgcc ggccagcggc acggtcaacg
     4801 ccacgaccgg gtcgagccgc aacagcccgg agagccgctc gcccgggtcg aggcggaaca
     4861 gcagctggtg cagcacgtcg acgccggtgc tcatcgcggc gaccaccagg ccggcgatgg
     4921 ccccgaccag cgccgcgagc gcgatgaggc tcgactcacg cgcccgcacc atggcgcgca
     4981 gccgccgcgg tatctccaac ttgctggcaa tcctgtcgat caagacggga attccgtgcg
     5041 gtgccggacg gccgatcggc ggatgatcac agaacgtgat tcacagaacg ttatggcgca
     5101 tgtcattacg cattaagcgc agccatcgag aacggacgcc cgggggcgct tcgctcgacg
     5161 ccttgccgcg ctgctttcgc atgacccgcg caatggagcg cgacttccac gaacaggcaa
     5221 caatggaacc cgccagacgc cgacttgttc acgtagcaaa atcgcgggga acgcgcgcca
     5281 tgcctcatct cattcatgcg attgttgcgg cggccgcagc ggcggcggtc gtgggtgccg
     5341 cactaccgct gctggcagag accggtgcaa cgaggctcga aggcaaagcc gccttcggcg
     5401 attggcgctt ggataaaccg ggaacgcggc ggctgatcag gccgcaggac ctcccggccg
     5461 gcgatcaagc cggttcggca accgattttc tctaccctgt gcgccgcagc gagcagcaaa
     5521 aaccggccgt tccgactggc ttcgaggtca cgttgttggc ctccggcctt tcgcatcagc
     5581 ggctcattcg cgtggcgccc aacggcgacg tattcgctgc cgaaagcgaa accggccggg
     5641 tccgcgtgct gcggcctaac cccggccaac cggcgtcggc cagcgtgttc gcggacgggc
     5701 ttcgcggacc gttcggcatc gccttctacc cgcccggccg tgatccggag tgggtctatg
     5761 tcggcaatac cgactccgtc gtccgcttcg cctatcgcag cggcgacctc aaagcgcgcg
     5821 caccggccga aaccgtcgtg ccgcatctgc cgactggcgg cagccaccgc acgcgcgacg
     5881 tggtgttctc gcccgacgga cgcacgatgt acgtctccgt cggctccgcc tccaatgtcg
     5941 gcgacgcgat gggaaagctg agcacgtcgg aattgcaggc ctggcaatcc acgcatgcgc
     6001 tcggcgccgc ctggggcaac gagaccgacc gtgccgcggt gctcgcgttc gatccgcagg
     6061 gcaagaacgg ccacatcttc gcgaccggca tccgcaactg tgtcggcatg gcggtcgcgc
     6121 cagggagcgg cgaactctgg tgctcgacca acgagcgcga cgggctcggc gataacgttc
     6181 catccgacta cgtcacgcgc gtgcgcgaag gcgcgttcta tggctggccc tggtactaca
     6241 tcggcgccaa cgaggatccg cgccgccgcg gcgagcggcc ggacctgaaa gacaagatca
     6301 cggtccccga cgtgctcatt caagcgcatt ccgcttcgct gcagatgacg ttctacgaag
     6361 gcacgcaatt ccccgccgaa tatcgcggca acatcttcgc cgccgagcac ggttcctgga
     6421 accgttccaa acccaccggc tacaaggtca ttcgcatcat cgtgaaggac ggcgtgccga
     6481 ccggcgagta tgaggacttt gccaccggct tcgtgatcga tgaccgcgaa ctgtggggcc
     6541 ggccggtcgg cgttgccgtc gacaacgacg gcgcgctgct cctctccgag gatgccggcg
     6601 gcacgatctg gcgcatcacc tattccggca acgctgcgca agcgcgttga acggattaat
     6661 attttccgcg gtaaacagcg cgcacacgac agggtgatgg aacgccgttc ggcgattcct
     6721 cgtttccccg attgccgttg cagcaagagg caaacgtgac cgaccgactg acgcgcgtgc
     6781 tgctcgccgg agtgttggtc ctactggcgg cgatcttcgc gcagccctac atcaacgaat
     6841 ccttgttctc gagccgcagc ccccgcccga tcgaggcgcg cggcagcctg gccgaggccg
     6901 aacgcacgac catcgccatc ttcaatgccg tgtcgccttc ggtcctgcag gtgatcggcc
     6961 acagcgcaag ccaggagcag gtcacgccgg aaggcgatca ggtcgtcggg gtgcagaccg
     7021 gcaccggctt cgtctgggac gaagccgggc acatcgtcac caacaatcac gtcctgcagg
     7081 gaacgagcgc gatcgacgtg cgcacgcccg caggcgacat cgtcgcggcc aaggtcatag
     7141 gcacggctcc gagctacgat ctcgctgtcg tgcgcctgcg cgactcgcgc cagctatcga
     7201 agccgatcgc gatcggaagc tcggccgatc ttcaggtcgg gcaatgggcc ttcgccatcg
     7261 gtaacccgtt cggtctcgac cactcgctca ccaccggcgt catcagcgcg ttgcggcgcc
     7321 ggctgccgac cagcgagggg cgcgaactcg cggacgtcat ccagaccgac gccgcgatca
     7381 atcccggcaa ttccggaggg ccgctgctcg attccgccgg ccgcctgatc ggcgtcacca
     7441 ccgcgatcct ctccccgtcc ggctcgaatg ccggcatcgg cttcgccatt cccgtcgatg
     7501 ccgtgaacaa ggtggtgccg caactcatca agaacgggcg cgtccccacg cccggcatcg
     7561 gcgtcatcat cgccagcgac gaggcggctt cccaactcgg caccgacggc gtcgtggtgg
     7621 tgcgcgtggt gcccgactcg ccggccgcga aagcgggatt gcgcggtgtc gatccctcga
     7681 gcggagccat gggtgacgtc atcgtcggcg ccaacggcgt ccaggtgcac cgtctcgccg
     7741 atctcaccga ccagatcgag aaaatcggga tcggtaacga aatcgggctc aaggtacagc
     7801 gcgacggccg caccatcccg gtctcggtcg gcgtcgagga tacgagcaaa gcctcctgag
     7861 cggcccgcca ccccggccac ctggcaaaat acgctgacgc ccgtcgcgcc ccaacgattc
     7921 gggggccgcc cttgccgtag cctgccgtct ccgtattgta gcgatccggg ccattcagct
     7981 ccggaacact tgggcgctca aggcgttaat aaccgcgatt ccgtgcgtgg gtggcaatcc
     8041 gaatggttca ggcacgcaag gcatcgcccc atccggattc gccgcatccg ccgctgagcg
     8101 gcgccgtcaa acctcgggga cagccgacca ttgcggcgac cgctacccaa accggcatag
     8161 tcgtcgagac cgacattccg gcgcgccttg atgccctgcc ggtcggacgc ttccacatcc
     8221 tcgtcattgt tgcgctcggc atcacctgga tcctcgacgg tcttgaagtc acgctggcgg
     8281 gcgcgctttc cggggagttg acgcaaagct ccggactggg tctgagcaat gcgcagatcg
     8341 gcattgcagg aagctcttac ctctgtggag cggtgctcgg cgccttcttt ttcggctggc
     8401 tgaccgatcg gctggggcgc aagaagttgt ttttcatcac gcttgccgtc tatcttacgg
     8461 cgaccgctgc caccggcttc tcctgggatg tgtggagctt cgtggtgttc cggttcctca
     8521 ccggcaccgg catcggcggc gagtacactg ccatcaattc gacaattcag gagcttattc
     8581 ccgcgcgcct gcgcggctgg accgatcttc tgatcaacgg aagtttctgg atcggagcag
     8641 cgctgggggc gggcggctcg atcgtcctgc tcaatcctgc ctttatcgat ccggggcttg
     8701 gctggcggct cgcgttcctg atcggagctt tgataggact gatcatcctc ctgatgcgac
     8761 gctggattcc ggaaagcccc cgctggctga tgacccatgg ctctgtcgcc gaagccgagg
     8821 ccgtcgtgcg cggcatcgag gcccgtgttg gtgtcggcgg ccgcgacgtg acgccagcgc
     8881 cgcgcgttcg gctgcgcatg cgcgaccaca cgccccttgg cgaagtcgcc cgcgcgttgt
     8941 tcgtgaccta ccccgagcgc accgtggtcg ggctcaccct gatggcggca caagccttct
     9001 tctacaacgc catcttcttc acctacgcgc tgatcctgac caatttctac ggcacgccgg
     9061 ccgatcaggt gggctggtac atcttgccat ttgccgcagg caacgtgctc ggaccggtcc
     9121 tgctcggccg tctgttcgac accgtcggcc gcaaggtcat gatcgcgctg acctatgcta
     9181 tgtcggggat cctgctcgcc ttgaccggct atctgttcag ccggaacctg ctcacggcgc
     9241 aggcgctgac cgcctgctgg acgtgcgtct tctttttcgc ctccgccgcg gcaagctcgg
     9301 cctacctcac ggtgagcgaa accttcccgc tcgagatgcg tgcgcttgcc atcgcgttct
     9361 tctatgcgat cggcactggc gcgggcggca tcggcggccc gctcctgttc ggcgtcctga
     9421 tcagtaccgg ctcgcgcggc aatgtcgcca tcggctacgc catcggggcg gcgctgatgc
     9481 tgttcgcggc ggcggtcgaa gtgcgtttcg gggtcgcggc cgaaagaaag ccgctcgaag
     9541 cggtcagccg gcctttatca tttatcgact gattggatac atacgtgcac agacaaggcg
     9601 acgtttcgga cctggacatg gaaatcgcga acacctcgct cgcttccgac ttgcgggaat
     9661 gcgcgatcct gctcgacatc gacggcacca tcctcgacat cgcgccggcg ccgcaggagg
     9721 tctgggtgcc gccggcgctg cggcatacgc tcggccgcct gcaggagttg accggcggcg
     9781 cggtggcgct ggtcagcggc cggccgcttg acgatatcga cctgatcttc gccccgctgc
     9841 agctcgcggc gatcggcggc cacggcgccg agatgcgccc ggtgccgggg accgtgccgc
     9901 aaacccgcgt cggctcgttg agcgcggaat tgaagcgcaa gctcgcgacc atcaccgagc
     9961 tcggccgggg gattctggtc gaggacaagg gttactcgct cgccctgcac taccggcttg
    10021 cgcccgagca cggcccggcg ctgcgtgccg cggtcgccca tgtctgcgcg caactgcccg
    10081 cgggctcggt cgagattctg cccggcaagc tcgtggtcga ggtcaagcct agcggggtga
    10141 gcaaggcgct cgcggtgagc gaactgatga cctatccgcc gttcgccgac cggcatccga
    10201 ttttcatcgg cgacgacacc accgacgagc cggtgtttgc cgtcattccc cgattcggcg
    10261 gcctcggctt ctccgtcggc cgggtcgttc ccggcgtcaa cggtcacttc gacaagcctg
    10321 aggacgtacg ctcgtggctg gcgcgaattg tagccgacca cggggatagc gcgggatgat
    10381 gacaggccac ggactggatc tggccgtcat cgggaacggg cgcacggccg cattggtcga
    10441 tccgacggcg cggatcgtgt ggtggtgcta tccgcgtttc gacggcgacc cgatcttctg
    10501 ccgattgctg gcgggcaagc aggagaaggg attctccgac gtcgtgctcg acgacatggc
    10561 ggagtttcag tcggaataca tgcgcaacac ggcgatcgtc tcgaccgtgc tgaccgaccg
    10621 caacggcggc aaggtccaga tcaccgactt cgtgccgcgc ttccgccagt tcggccgcgt
    10681 attccggccg ccgcagctct atcggatcgt cgaaccggtc gccggcctgc cgcggatcac
    10741 catcaggatg cggcccgcga gcgactacgg caagccgctc acgaaccact cgcttggcag
    10801 caaccatatc cgctattccg ccgagggcac cgtgatccgc ctgacgacgg acgcgccgct
    10861 ctcgctgatc gagagcgagg cgcccttcgt gctcacccgg ccggtgcacc tcgtgttcgg
    10921 gccggacgag cccttccagg gcgatctgtc gtcgacctgc cgcgaattcg ccgagcgcac
    10981 gcacgactac tgggtggaat gggtgcgccg cctgtcgatc tcggtcgact ggcaggaagc
    11041 gatcatccgc gccgccatca cgctcaagct cagcaatttc gacgagaccg gagccgtcat
    11101 cgccgcgcac accacctcca ttcccgaggc gccgggatca gggcgcacct gggactaccg
    11161 ctactgctgg ctgcgcgatg cgtatttcgt cgtccaggcg ctcaaccgca tcggcgccac
    11221 gcgcacgatg gaggagttca tctccttcac cctgtcgatc gtctcgaagc cggaccagga
    11281 gctgcgcccg ctctacagcg tggtgccgac
//
LOCUS       DATMQB010000002         9365 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1240617, whole genome shotgun sequence.
ACCESSION   DATMQB010000002 DATMQB010000000
VERSION     DATMQB010000002.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9365)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9365)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9365
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1240617"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..598)
                     /locus_tag="VNY79_00055"
     CDS             complement(<1..598)
                     /locus_tag="VNY79_00055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HWX70867.1"
                     /translation="MALRSRPRPRGAIGHRVPGRPPRRAKADADTDLRTGSAAPSELS
                     ARTLKASIGFEVRRLRKSIDLTVADLGAAAGISAGMLSKIENGSISPSLGTLDALAKA
                     LNVPITRLFAETDERRDCSFVKAGTGVRIERRGTKAGHRYDLLGHSLGGVIAVEPYLI
                     TLAEDAAPYTHFRHAGVEFIYMLSGKVRYRHGDRTYLME"
     gene            782..1672
                     /locus_tag="VNY79_00060"
     CDS             782..1672
                     /locus_tag="VNY79_00060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012321721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine amidotransferase family protein"
                     /protein_id="HWX70868.1"
                     /translation="MCGIVGLFLKDHALEPELGSLLAGMLGTMRDRGPDSAGFAVYGA
                     ATPGAIKLTVRGPRDCDFAALVRRLEAGRTPLPHVVHDTHLVLTVPSADEAAIRAEIA
                     AMSELTVIGSGRRMAIFKEVGRPDKVAERFGLDGMAGSHAIGHTRMATESAVTTDGAH
                     PFTTGPDQCLVHNGSLSNHNALRRELIRHGLSFQTENDTEVAAGYMSWRMREGASLEQ
                     TLNASLTALDGFYTFVVGTETGFGVLRDPIACKPAVMAETDRWVAFGTEYRALVDLPG
                     IDVARVWEPTPAKAYLWELH"
     gene            1674..2363
                     /locus_tag="VNY79_00065"
     CDS             1674..2363
                     /locus_tag="VNY79_00065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein glxC"
                     /protein_id="HWX70869.1"
                     /translation="MHTVDLSQTSLRELNAALHGLGSFTNETHWRVLHPRGQHAIAAG
                     IDAAITVEIEGHVGYYCAGMNKDATVVVNGSAGQGVAENMMSGRVHVKGDASQAAGAT
                     GCGGLLVVDGNASARCGISMKGIDIVVKGSVGHLSAFMGQAGNLVVLGDAGEALGDSI
                     YEARLFVRGKVESLGADCIEKPLDEQHKAGLARLLAAAGLNGAVDPGSFRCYGSARKL
                     YHFHIDNVGSY"
     gene            2363..3697
                     /locus_tag="VNY79_00070"
     CDS             2363..3697
                     /locus_tag="VNY79_00070"
                     /EC_number="1.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003594873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015930 - glutamate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0016638 - oxidoreductase activity, acting
                     on the CH-NH2 group of donors [Evidence IEA];
                     GO_process: GO:0006537 - glutamate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding glutamate synthase family protein"
                     /protein_id="HWX70870.1"
                     /translation="MEPLDRWIHTPPRPSATFDEFAIAEIRRAAATGIYDIRGFGAKR
                     KLPHFDDLLFLGASVSRYPLEGYREKCATDVTIGTRFAKRPITLKIPVTIAGMSFGSL
                     SAPAKEALGRGATAMGTSTTTGDGGMAPEEREHSKILVYQLLPSRYGMNPDDLRKADA
                     IEVVIGQGAKPGGGGMLLGQKISRRVADMRTLPEGIDQRSACRHPDWTGPDDLEIKLH
                     ELREITDWEKPIYVKIGASRPQYDIPLAVKAGADAIVLDGMQGGTAATQEVFIEHVGI
                     PTLAAIPPAVRALQDLGMHRRVQLIVSGGVRNGADVAKCLALGADAVSIGTAALIALG
                     DNDPHYENEYRALGSRAGAYDDWHEGRDPAGITTQDATLARRLDPVAAGRKLANYLAV
                     LTLEAQTIARACGKSHVHNLEPEDLVALTVEAAAMARVPLAGTDWIPGVSRF"
     gene            3760..5064
                     /gene="glnT"
                     /locus_tag="VNY79_00075"
     CDS             3760..5064
                     /gene="glnT"
                     /locus_tag="VNY79_00075"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type III glutamate--ammonia ligase"
                     /protein_id="HWX70871.1"
                     /translation="MASLGEYARQKGIKYFLVSFVDLFGTMRAKIVPATAIDAISKSG
                     AGFAGFAVWFDMTPAHPDILAMPDPDSVIQLPWKPEVAWVTGDLIMDGKAVEQNPRQV
                     LKRVITKAAAQGYELKSGVECEYFLIQPDGKAISDAADIQAKPCYDQQALMRRYDVIA
                     EICDNMIALGWRPYQNDHEDANGQFEMNWEYDSALKTADRHAFFKYMVKSIAEKHGLR
                     ATFMPKPFPHLTGNGCHAHLSLWSSTTGKNLFEDAKGELGLSAMGYHFVAGVMHAAEA
                     VAAITNPTVNSYKRLNAPPTLSGATWSPNTITYAGNNRTHMIRIPDAGRFELRLADGA
                     ANPYLLQAALLVAGLDGMKNKRDPGKRLDIDMYAEGHTVKNARRLPLNLLDALRAFDQ
                     STVLREGLGDEFSSAYLKLRYDDWNKYSRHLTEWERETTLDC"
     gene            5108..6358
                     /locus_tag="VNY79_00080"
     CDS             5108..6358
                     /locus_tag="VNY79_00080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003605127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008115 - sarcosine oxidase activity
                     [Evidence IEA];
                     GO_process: GO:0046653 - tetrahydrofolate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sarcosine oxidase subunit beta family protein"
                     /protein_id="HWX70872.1"
                     /translation="MKYSAFSLVYEALRGHAGWTPAWRDPAPKREYDVIIVGGGGHGL
                     AAAYYLAKEHGLTNVAVLEKGWIGSGNAGRNTTIIRSNYLLPANIQFYEWSMKLWEGL
                     ERDLNYNVMVSQRGVVNLYHSDAQRDAFARRGNAMRLNGVDAELLDRGQVRAMLPFLD
                     YDNARFPIHGGLLQGRGGTARHDAVVWGYARAADRRGVDIIQNCEVTGFVIRNGRVAA
                     VETTRGTIRAGKVGLAVAGNSSRVAAMAGLRLPIESHVIQAFVTEGIKPAIDCVLTFG
                     AGHFYISQSDKGGLVFGGDLDGYNTYAQRGNLPAVEDIIEGGVALWPGLGRLRLLRHW
                     GGLIDMTMDGSPIIDRTPIDGLYLNGGWNYGGFKATPASGWCFAHLIAREEPHALNAA
                     FRLDRFAAAAVIDEKGQGAQPNLH"
     gene            6366..6662
                     /locus_tag="VNY79_00085"
     CDS             6366..6662
                     /locus_tag="VNY79_00085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020188206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sarcosine oxidase subunit delta"
                     /protein_id="HWX70873.1"
                     /translation="MRIACPFCGERGNEEFAYLGDATVVRPDPGAAGATQAFADYLYL
                     RNNVRGLHRELWYHAAGCHGWLVVTRDTMSHEIKRVEFARDVARARPLAAGGGR"
     gene            6659..>9365
                     /locus_tag="VNY79_00090"
     CDS             6659..>9365
                     /locus_tag="VNY79_00090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008115 - sarcosine oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sarcosine oxidase subunit alpha family protein"
                     /protein_id="HWX70874.1"
                     /translation="MTRAASAPVNDSHSLPRRRLPHGGLIDRSTPLSFTFDGRGYLGF
                     AGDTLASALVANDVGLVGRSFKYHRPRGIFTAGPEEPNALVELRDGPRREPNTRATVI
                     ELFDGLVAASQNRWPSLAFDVMAVTGWLSPFFPAGFYYKTFMWPPGFWEKVYEPTIRR
                     AAGLGRAAPGGDPDEYEKAFAHCDVLVIGSGPTGLMAAVTAARAGARVILAEEDFRLG
                     GRLLAERHTVGERDGASWVAAIEAELASMPEVRIMRRTSVFGVYDHGQYGAVERVSDH
                     IPEPPPHQPRQRFWKIVARRAVLAAGASERPIAFAGNDRPGVMLAGAVRTYLNRFAAA
                     PASRLVVFTNNDDGWCGAADAAEAGLTVEAIVDSRADAQQRLAASASGSARVFFGAKV
                     AAAKGAEALRAVDIIDAKGAAITIACDGLAISGGWNPSLHLTCHLGGKPQWREDIAAF
                     VPQAAPPGMLVAGAANGDLSLSACLKTGAEAGATAAADCGFAARPPAPPSASDEPIAM
                     TPLWWVKGAGKAFVDFQNDVTVDDIALAEREGFRSVEHLKRYTTLGMATDQGRIGGVT
                     GLAILSELVNRPIPQVGTTTYRPPYTPVALGALAGHHRGKDFRPTRLPPSHQWAEEQG
                     AVMVETGAWLRAQYYPRPGETDWLETVRREVSTVRSAVGVCDVSTLGRIDIQGGDAGL
                     FLDRIYTNAFSSLPVGKTRYGLMLREDGFVMDDGTTSRLATDHYFMTTTTANAAKVMQ
                     HLEFCHQVLWPGLDVQMVSVSEQWAQYSIAGPRSRDTLRNLVDAQHDLANEAVPHLAA
                     KPVTVLRGLEALLFRLSFSGELAYELAVPARYGDALMRAVMQAGKTFGIAPYGTEALS
                     AMRIEKGHVSTNEVNGQTTAHDLGAARMLSARKDFIGRVMAARPAL"
BASE COUNT         1582 a         3180 c         3095 g         1508 t
ORIGIN      
        1 gctccatcag ataggtgcgg tcgccatgcc ggtagcggac ctttccggac agcatgtaga
       61 tgaactcgac gcccgcatgc cggaaatgcg tgtagggcgc ggcgtcctcg gcaagcgtga
      121 tgaggtacgg ttcgaccgcg atcacgccgc caagcgagtg gccgagaaga tcgtagcggt
      181 gtccggcctt ggtgccgcgc cgctcgatgc gcacgccggt gccggccttc acgaacgagc
      241 agtcacggcg ttcgtcggtt tccgcgaaca gccgggtgat gggcacgttg agtgccttgg
      301 cgagggcgtc cagcgtcccg agcgacggcg agatgctgcc attctcgatc ttcgaaagca
      361 tgccggccga aataccggcc gcggcgccga ggtcggcgac ggtcaagtcg atcgacttgc
      421 gcagccgccg cacctcgaag ccgatgctgg ccttgagcgt ccgggccgag agttcgctcg
      481 gcgccgcaga accggtccgc aggtcggtat ccgcatccgc tttcgcccgg cgcggtgggc
      541 gcccggggac gcgatgcccg atcgcgccac gtggtctcgg tcttgatcga agtgccatgg
      601 tcttgcccca agagcgagga agtcgccgga ccgccgctcc ggggattttc aggcccggcg
      661 ctgaaccgcc tatttataga gtttcctcgc gagaaaaaaa ggtgcctggg agttgacagg
      721 cgcaccattc gcgtacaccg tcacgcccgg cgacgacccc cagacgcgcg agctttcgcc
      781 gatgtgcggc attgtagggc tgtttctcaa ggaccacgcg ctcgaacccg agcttggctc
      841 gctcttggcc ggcatgctcg gcaccatgcg cgaccgcggg cctgattcag cgggctttgc
      901 cgtctacggc gccgcaacgc ccggtgcgat caagctgacc gtccgcggtc cgcgcgattg
      961 cgatttcgcc gccctcgtgc gccgcctcga agcgggccgc acgccgctcc cgcatgtcgt
     1021 gcacgacacc cacctcgtcc tcaccgttcc gtccgcggat gaagcggcca tacgggcgga
     1081 gattgccgcc atgtcggaac tgactgtcat cggcagcggc cggcgcatgg ccatcttcaa
     1141 ggaggtcggg aggcccgaca aggtcgcgga gcgtttcggc ctcgacggca tggccggcag
     1201 ccatgcgatc ggccacaccc gcatggcgac cgaatccgcg gtgaccaccg acggcgcgca
     1261 tcccttcacc accgggcccg accagtgcct ggtgcacaac ggctcgctct cgaaccacaa
     1321 cgcgctccgc cgtgagctga tcaggcatgg actctcattc cagaccgaga acgacaccga
     1381 ggtggcggcg ggctacatga gctggcggat gcgtgagggc gcctcgcttg agcagacgct
     1441 caacgcctcg ctcaccgcgc ttgacggctt ctacaccttc gtggtcggca ccgagactgg
     1501 cttcggggtg ctgcgcgatc cgatcgcttg caagccagcg gtcatggcgg aaactgaccg
     1561 ttgggtcgcg ttcggcaccg agtatcgcgc gctggtggac ctgcccggca tcgacgttgc
     1621 ccgggtgtgg gagccgacgc cggccaaagc gtatctgtgg gagctgcact gatatgcaca
     1681 ccgtcgacct ctcgcagacc tcgctgcgcg agctcaacgc ggcgctgcac ggtctcggct
     1741 cgttcaccaa cgagacgcat tggcgggtgc tccatccgcg cgggcagcac gcgatcgccg
     1801 ccggcatcga cgcggcgatc acagtcgaga tcgaggggca tgtcggctac tactgcgcgg
     1861 gaatgaacaa agacgcgacc gtcgtcgtca acggctccgc cgggcagggc gttgccgaaa
     1921 acatgatgtc cgggcgcgtc cacgtgaagg gcgacgcctc gcaggccgcg ggcgcgaccg
     1981 gctgcggcgg cctgctcgtt gtcgatggca acgcctcggc gcgatgcggc atttcgatga
     2041 agggcatcga catcgtggtg aaggggtcgg tcgggcatct gtccgccttc atggggcagg
     2101 ccggcaacct cgtggtgctc ggcgacgccg gcgaagcgtt gggcgattcc atctacgagg
     2161 cgcggctgtt cgtccgcggc aaggtcgaaa gcctcggcgc cgattgcatc gagaagcctc
     2221 tcgatgagca acacaaggcc gggctcgcgc gcttgctggc agcggcgggg ctcaacggcg
     2281 cggtcgatcc gggctcgttc cgctgctacg gctccgcgcg caagctctat cacttccaca
     2341 tcgacaacgt cggatcgtac tgatggagcc gctggaccgc tggatccata ccccgccgcg
     2401 gccgtcggcg accttcgacg agttcgccat cgccgagatt cgccgcgccg cggcgaccgg
     2461 catctatgac atccgcggct ttggcgccaa gcgcaagctt ccgcattttg acgacctgct
     2521 gtttctcggc gcctcggtca gccgctatcc gctcgaaggc taccgggaga aatgcgcgac
     2581 cgacgtgacg atcggcacgc gcttcgccaa aaggccgatc acgctgaaga ttccggtgac
     2641 gatcgccggc atgagcttcg gctcgctgtc ggcgccggcc aaggaggcgc tcggccgcgg
     2701 cgcgaccgcc atgggcacat cgacgaccac cggcgacggc ggcatggcgc cggaagagcg
     2761 cgagcattcg aaaatcctgg tctatcagct gttgccctcg cgctacggca tgaacccgga
     2821 cgatctgcgc aaggccgacg ccatcgaggt cgtgatcggg cagggtgcca agcccggcgg
     2881 cggcggcatg ctgctcgggc agaagatttc ccggcgcgtg gccgacatgc gcacgttgcc
     2941 ggagggcatc gaccagcgct cggcgtgccg gcacccggat tggaccggtc cggacgacct
     3001 ggagatcaag ctgcacgaac tgcgcgagat caccgattgg gagaagccga tctacgtcaa
     3061 gatcggcgcc tcgcgcccac aatacgatat cccgcttgcg gtgaaggccg gcgccgacgc
     3121 catcgtgctc gacggcatgc agggcggcac cgcggccacc caggaagtgt tcatcgagca
     3181 cgtgggcatt cccaccctcg ccgctatccc gcccgcagtg cgggcgctgc aggatctcgg
     3241 catgcaccgc agggtgcagc tcatcgtctc cggcggcgtg cgcaacggcg ccgacgtggc
     3301 caagtgcctg gcgctcggcg ccgacgcggt ctcgatcggc accgcggcgc tgatcgccct
     3361 cggcgacaac gatccgcact atgagaacga ataccgggcg ctcggcagca gggccggggc
     3421 gtatgacgac tggcacgaag gccgcgatcc cgccggcatc accacccagg acgcgacgct
     3481 ggcgcgccgc ctcgatccgg tcgccgccgg ccgcaagctc gccaactacc tcgccgtgct
     3541 cacgctggag gcgcagacca tcgcccgggc ctgcggcaag tcgcacgtcc acaatctgga
     3601 gccggaagac ctcgtggctc tcaccgtcga agccgcggcg atggcgcgcg tcccgctggc
     3661 gggcaccgac tggattccgg gggtcagcag attttgagcg ccaaagagtc gaaacgcagc
     3721 agctccgggc cgaagcgaca aagcgaaagg gcgcagctca tggcatcact cggcgagtat
     3781 gcgaggcaga aagggatcaa atattttttg gtctcgttcg tcgacctgtt cggcaccatg
     3841 cgcgccaaga tcgtgccggc gaccgcgatc gacgcgatct cgaaatcggg agcgggcttc
     3901 gccggctttg ccgtctggtt cgacatgacg ccggcgcacc ccgatatcct ggcgatgccg
     3961 gacccggaca gcgtcattca actgccgtgg aaacctgagg tcgcctgggt gaccggcgac
     4021 ctgatcatgg acggcaaggc cgtcgagcag aatccgcgcc aggtgctcaa gcgcgtcatc
     4081 accaaggccg cggcgcaagg ctacgagctg aaatccggcg tcgaatgcga atattttctg
     4141 atccagccgg acggcaaggc gatctccgac gccgccgaca tccaggccaa gccctgctac
     4201 gaccagcagg cgctgatgcg gcgctacgac gtcatcgccg aaatctgcga caacatgatc
     4261 gcgctcgggt ggcgcccgta tcagaacgat cacgaggacg ccaacggtca attcgagatg
     4321 aactgggaat acgactcggc gctcaagacc gcggaccggc acgccttctt caagtacatg
     4381 gtaaaatcga tcgcggaaaa gcatgggctg cgcgcaacgt tcatgcccaa gcccttcccg
     4441 cacctcaccg ggaacggttg ccacgcgcac ctgtcgctgt ggtcgtccac gaccggcaag
     4501 aatttgttcg aggacgccaa gggggaactc ggcctctccg ccatgggcta ccatttcgtc
     4561 gccggcgtca tgcacgcggc cgaggcggtc gccgcgatca ccaatccgac ggtgaactcg
     4621 tacaagcggc tcaacgcgcc gccgacgctg tcgggcgcga cctggtcgcc caacaccatc
     4681 acctatgccg gcaacaaccg tacccacatg atccgcattc cggacgccgg ccgcttcgaa
     4741 ctgcggctcg ccgacggcgc cgccaatcct tatctgctgc aggcagcgct cctggtcgcc
     4801 ggcctcgacg gcatgaagaa caagcgcgac cccggcaagc gcctcgacat cgacatgtat
     4861 gcggaggggc acacagtaaa gaatgcgcgg cggctgccgc tgaacctcct cgatgcgctg
     4921 cgggcattcg atcagtcgac ggtgctgcgc gagggcctcg gcgacgaatt ctccagcgcc
     4981 tatctcaagc tcagatacga cgactggaac aagtactccc gtcatctcac cgaatgggag
     5041 cgcgagacga cgctcgattg ctaggcccgc aaaagctgcg cgatcgggtc gccggccgga
     5101 atagccgatg aagtattcag ccttttcgct cgtctacgag gcgttacgcg gccacgccgg
     5161 ctggacgccg gcgtggcgcg atccggcgcc gaagcgcgaa tacgatgtga tcatcgttgg
     5221 cggcggcggt catggcttgg cggccgccta ctatctcgcc aaggagcacg gcctgaccaa
     5281 cgtcgccgtt ctcgaaaagg gatggatcgg ctcgggcaat gccggccgca acaccacgat
     5341 catccgctcg aactaccttc tgccggcgaa tatccagttc tacgaatggt cgatgaagct
     5401 ctgggaggga ctggagcgcg acctcaatta caatgtgatg gtcagccagc gcggcgtggt
     5461 caatctctat cactccgacg cgcagcgtga cgccttcgcc cgccgcggca acgccatgag
     5521 gctcaatggc gtcgatgcgg aactgctcga ccgcggtcaa gtccgggcga tgctgccgtt
     5581 tctcgactac gacaatgcgc ggtttccgat ccatggcggc ttgctgcagg gccgtggcgg
     5641 cacggcgcgc cacgacgcag tcgtatgggg ctatgcccgg gccgccgacc ggcgcggcgt
     5701 cgacatcatc cagaattgcg aggtgaccgg ctttgtcatc cgcaacgggc gcgtcgccgc
     5761 cgtcgagacg acgcgcggga cgatccgcgc gggaaaggtc gggctcgcgg tcgctggcaa
     5821 ctcctcgcga gttgcggcga tggcgggatt gcgcctgccg atcgagagcc acgtgatcca
     5881 ggcgttcgtg accgagggca tcaagcccgc tatcgattgc gtgctaacgt tcggcgccgg
     5941 ccacttctac atcagccagt cggacaaggg cgggctggtg ttcggcggcg acctcgacgg
     6001 ctacaacact tatgcgcagc gcggaaacct tccggcggtg gaagacatca tcgagggcgg
     6061 ggtcgcgctc tggccaggcc tcggacggct gcgcctcctg cggcattggg gcggcctcat
     6121 tgacatgacg atggacggga gcccgatcat cgatcgcacg ccgatcgacg ggctctatct
     6181 caacggcggc tggaactacg gcggcttcaa agcgacgccg gcctccggct ggtgctttgc
     6241 gcacctgatc gctcgcgaag aaccgcacgc cctgaacgcg gccttccgcc tcgaccgctt
     6301 cgccgccgcc gcagtgatcg acgagaaggg ccagggcgcc cagcccaacc tgcattgagg
     6361 acgacgtgcg gattgcctgc ccattttgcg gcgagcgcgg caacgaggag ttcgcctatc
     6421 tcggcgatgc gacggtcgtg cgtccggatc ccggcgccgc cggcgcgacg caagccttcg
     6481 ccgattacct ctatctgcgc aacaatgtgc gcggcctcca tcgcgaactc tggtatcacg
     6541 ccgccggctg tcacggctgg ctcgtcgtga cccgtgacac gatgagccac gagatcaagc
     6601 gcgtggaatt cgcccgcgat gtggcgcgcg cgcgcccgct cgctgccggg ggcggacgat
     6661 gacgcgcgcg gcttcggcac ctgtcaatga ctcgcattcg cttccccggc gtcgccttcc
     6721 gcacggcgga ttgatcgatc gctcgacgcc gctatcgttc accttcgacg ggcgaggcta
     6781 tctgggattc gccggagata cgcttgcctc ggcgctcgtt gccaacgacg tcggcctcgt
     6841 cggccgctcg ttcaagtatc accggccgcg cggcattttt actgccgggc ctgaggagcc
     6901 caacgcgctc gtcgaattgc gcgacggccc ccgtcgcgag ccgaacacgc gcgcgacggt
     6961 catcgagttg ttcgacggcc tcgtcgcggc gagccagaac cgctggccat cgctcgcctt
     7021 cgacgtgatg gcggtcaccg gctggctttc gcccttcttc ccggccgggt tctactacaa
     7081 gaccttcatg tggccgccgg gtttctggga gaaggtctac gagccgacga tccgccgcgc
     7141 cgccggtctc gggcgcgcag cgccgggcgg cgatcccgac gaatacgaga aagcattcgc
     7201 gcactgcgac gttctcgtca tcggctcggg cccgacgggc ctgatggcgg cggtgacggc
     7261 ggcgcgcgcc ggagcgcgcg tcattctcgc cgaggaggat ttccggctcg gcgggcgcct
     7321 tctggcggag cgtcatacgg tcggcgaacg cgatggcgca agctgggtcg ccgcgatcga
     7381 ggctgaactc gcgtccatgc ctgaagtccg catcatgcgc cgcaccagcg tgttcggcgt
     7441 ctacgatcac gggcagtacg gcgcagtcga gcgcgtgagc gaccacattc ccgagccgcc
     7501 gccgcatcag ccgcgccagc gcttctggaa gattgtcgcc cggcgcgcgg tgctggccgc
     7561 gggcgcgagc gaacggccga ttgcctttgc cggcaacgat cgcccgggcg tcatgctcgc
     7621 gggcgccgtg cgcacttacc tcaaccgctt tgccgccgcg ccggcgtcac ggctggtcgt
     7681 gttcaccaac aatgacgatg gctggtgcgg cgcagccgac gccgcggaag cgggcctcac
     7741 cgtcgaggcc atcgtcgatt cacgcgccga cgcacagcag cgtcttgccg cctcggcatc
     7801 cggatcggcg cgcgtgttct tcggggcgaa agtcgcagca gcgaagggcg cggaagcgct
     7861 ccgcgccgtc gacatcatcg atgcgaaggg cgcggcgatc acgatcgcct gcgacggcct
     7921 cgcgatcagc ggcggctgga atccatcgct gcacctgact tgccacctcg gcggcaagcc
     7981 gcaatggcgc gaggacatcg ccgccttcgt gccgcaggca gcgcctcccg gcatgctagt
     8041 tgcgggcgcc gcgaacggcg acttgagcct gagcgcttgc ctcaagaccg gcgccgaagc
     8101 cggcgccacg gccgcggccg attgtggctt cgccgcgaga ccgcccgcgc cgccaagcgc
     8161 cagcgacgag ccgatcgcca tgacgccgtt gtggtgggtc aagggagccg gcaaggcctt
     8221 tgtcgatttc cagaacgacg tcaccgtcga cgatatcgcg cttgccgagc gcgagggctt
     8281 tcgatcggtc gagcatctca agcgctacac cacgctcgga atggcgaccg atcagggcag
     8341 gatcggcggc gtcaccggcc ttgcgatcct ctccgagctt gtgaaccggc cgatcccgca
     8401 agtcggaacg accacctatc gcccgccgta cacccccgtc gcgctcggcg ctcttgccgg
     8461 acaccaccgc ggcaaggatt ttcgccccac gcggctgccg ccgtcgcatc aatgggcgga
     8521 ggagcagggc gccgtgatgg tagaaaccgg cgcctggctg cgcgcccaat attatccgcg
     8581 gcccggggag accgactggc tcgagacggt caggcgcgag gtgagcacgg tgcgttccgc
     8641 ggtcggggtc tgcgacgtat cgactctcgg caggatcgac atccagggtg gcgacgccgg
     8701 gcttttcctc gatcgcatct acaccaacgc gttctcatcg ttgccggtcg gcaaaacgcg
     8761 ctacggcttg atgctgcgcg aggacggctt cgtcatggac gacggcacca cgtcgcggct
     8821 cgccaccgac cactatttca tgaccacgac gacggccaac gccgcgaagg tcatgcagca
     8881 tctcgaattc tgtcatcagg tgctttggcc cgggctcgac gtacagatgg tctcggtgtc
     8941 ggagcaatgg gcgcagtatt cgatcgccgg gccgcggtcg cgcgacacgc tgcgcaatct
     9001 cgtcgacgcg cagcacgatc ttgccaatga ggccgttccg catctggcgg caaagccggt
     9061 caccgtgttg cgcggacttg aggcgctgct cttccgcctc tccttctcgg gggaactcgc
     9121 ctatgagctt gcggtacccg cgcgctacgg cgacgcgttg atgcgcgcag tcatgcaggc
     9181 cgggaaaacg ttcggcatcg cgccctatgg caccgaggcg ctcagcgcaa tgcgcatcga
     9241 gaagggccac gtctcgacca acgaggtcaa cgggcagacc accgcgcacg atctcggcgc
     9301 cgcgcgcatg ctgtcggcgc gcaaggattt catcggccgg gtcatggccg cgcgcccggc
     9361 gctca
//
LOCUS       DATMQB010000003        19838 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1241076, whole genome shotgun sequence.
ACCESSION   DATMQB010000003 DATMQB010000000
VERSION     DATMQB010000003.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 19838)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19838)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19838
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1241076"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1244)
                     /locus_tag="VNY79_00095"
     CDS             complement(<1..1244)
                     /locus_tag="VNY79_00095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HWX70875.1"
                     /translation="MTSRPKKSTPSLFAAAGLERDAPRPLADKLRPDQLADVVGQDHL
                     LGPDGALTRMLETRSLGSLVFWGPPGTGKTTVARLLARATELHFEQISAIFSGVADLK
                     KVFDAARQRRETGQGTLLFVDEIHRFNRAQQDSFLPVVEDGTIVLVGATTENPSFELI
                     APLLSRSRVLVFKPLDAAALGKLLERAEAAEGKTLPLDEDARASLIRMADGDGRAALT
                     LAEEVWRAARHGESFDAAALQQVVQRRAPIYDKAQDGHYNLISALHKSVRGSDADAAL
                     YYLCRMLDAGEDPLYLARRIVRMAVEDIGLADPQALVVANAAKEAYDFLGSPEGELAI
                     AEAVIYLATAPKSNATYVAFGEAMRTAKEAGSLLPPKHILNAPTRLMKSEGYGSGYEY
                     DHDAEDAFSGQDYFPEKLGRHK"
     gene            complement(1311..2714)
                     /locus_tag="VNY79_00100"
     CDS             complement(1311..2714)
                     /locus_tag="VNY79_00100"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HWX70876.1"
                     /translation="MPDLRVCAALLAAAVSALTPLLQSASAQERRVPSGPAEVQLSFA
                     PVVRRVAPAVVNVYAARVIENRNPFMNDPFFRQFFGAVPREQVQRSLGSGVIVDPSGL
                     VVTNNHVIEGASAVKISLADKREFEAEIVLKDEHSDLTILRIKGANERFPVLEFGNSD
                     ELQVGDVVLAIGDPFGVGQTVTHGIVSAVARTQVGISDYRFFIQTDAAINPGNSGGAL
                     VDAAGRLVGINTAIYSRSGGSQGIGFAIPANMVRVVVASAKGGSGAVKRPWLGAKLQE
                     VTPEIAESMGLKRPSGALVANVASGGPAARAGIRTGDLIVSIDGTLVDDPNAFDYRFA
                     TKALGGTAQIGLVRQGKEVAVPVALQGLPDTPRNELEIRGRSPFLGVTVANLSPALAD
                     ELRLDPQTEGVVVTAVADGSPARSLGFQKGDIVLSVNNQKIAKPTDLDRIVNAGSRQW
                     HITIVRGGQQISVVLSG"
     gene            complement(2783..3214)
                     /gene="rplQ"
                     /locus_tag="VNY79_00105"
     CDS             complement(2783..3214)
                     /gene="rplQ"
                     /locus_tag="VNY79_00105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009797112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005762 - mitochondrial large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HWX70877.1"
                     /translation="MHHAKTHRRFNRRSDHRRSMLANLAASLIKHEQITTTLPKAKDL
                     RPVVEKLVTLGKRGDLHARRQAIAQMRDLAMVKKLFEVIGPRYQGRNGGYLRVLKAGF
                     RYGDSAPVAVIEFVDRDVEAKGKDSGPVEAHPVETPAPAAA"
     gene            complement(3358..4389)
                     /locus_tag="VNY79_00110"
     CDS             complement(3358..4389)
                     /locus_tag="VNY79_00110"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HWX70878.1"
                     /translation="MGDNVTIQKNWQELIRPSKLQVSAGGDARRAATVVAEPLERGFG
                     VTLGNALRRILLSSLQGAAVQSVHIDGVLHEFSSIAGVREDVTDIVLNIKDIAIKMQG
                     DGPKRMVVKKQGPGTVTASDIQTVGDIVVLNPDLVLCTLDEGAEIRMEFTVNTGKGYV
                     PAERNRPEDAPIGLIPVDSLFSPVRKVSYKVENTREGQILDYDKLTLSIETNGAVTPD
                     DALAYAARILQDQLNVFVNFEEPKRETAQEAIPDLAFNPAFLKKVDELELSVRSANCL
                     KNDNIVYIGDLVQKTEAEMLRTPNFGRKSLNEIKEVLVQMGLHLGMEVPGWPPENIEE
                     LAKRFEDHY"
     gene            complement(4492..4881)
                     /gene="rpsK"
                     /locus_tag="VNY79_00115"
     CDS             complement(4492..4881)
                     /gene="rpsK"
                     /locus_tag="VNY79_00115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HWX70879.1"
                     /translation="MGKEATRVRRRERKNIASGVAHVNATFNNTMITITDVQGNTIAW
                     SSAGTMGFKGSRKSTPYAAQVAAEDAAKKAQEHGMRTLEVEVAGPGSGRESALRSLQA
                     AGFTITSIRDVTPIPHNGCRPRKRRRV"
     gene            complement(4946..5314)
                     /gene="rpsM"
                     /locus_tag="VNY79_00120"
     CDS             complement(4946..5314)
                     /gene="rpsM"
                     /locus_tag="VNY79_00120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HWX70880.1"
                     /translation="MARIAGVNIPTNKRVVVALQYIHGIGPAKAKEIMHKVSMPDARR
                     VSQLTDQEVLQLREVIDRDYVVEGDLRREVAMNIKRLMDLGCYRGLRHRRGLPVRGQR
                     THTNARTRKGPAKPIAGKKK"
     gene            complement(5537..6361)
                     /locus_tag="VNY79_00125"
     CDS             complement(5537..6361)
                     /locus_tag="VNY79_00125"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019205 - nucleobase-containing compound
                     kinase activity [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HWX70881.1"
                     /translation="MRLILLGPPGAGKGTQAQHLVAKYGLLQLSTGDMLRAAVKAGTP
                     LGREVQEIMARGALVPDDVVVEIVAERIEQPDARKGFILDGFPRTMAQAVALDRMLAE
                     RGLSLDAVVELRVDEAALIRRIESRIAAMKAQGEGLRDDDSPEVLHRRLAAYRDQTAP
                     LITYYQLQGMLRSLDGMAPIAQVAAEIEKVLAGKAAKAPPKLPKSAPKAPRPAAKKAV
                     GKPPRPRIEKRIGKKIGKKSKAPPAARRRPAAARTKVDRTARRGAARRPKAGNRKR"
     gene            complement(6358..7689)
                     /gene="secY"
                     /locus_tag="VNY79_00130"
     CDS             complement(6358..7689)
                     /gene="secY"
                     /locus_tag="VNY79_00130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HWX70882.1"
                     /translation="MVSAAEQLAANLNFGALAKAEELKKRIWFTLGALLVYRLGTYIP
                     LPGIDPNAWDQIFRTQAGGILGMFNMFAGGGIHRMAIFALNIMPYISASIIIQLMTTV
                     SPTLEQLKKEGEAGRKMINQYTRYLTVVLAAFQAYGIAVGLEGASNVVTDPGLFFRIS
                     TVITLTGGTMFLMWLGEQITQRGIGNGTSLIIMSGIVAQLPSAIAGTLELGRQGALST
                     GLILIVLVMAVAVVTFIVFMERAQRRLLIQYPKRQVGNRMFEGQSSHLPLKLNTSGVI
                     PPIFASSLLLLPTTVANFTAGQGPGWLTTITTQLSHGRPLFLALYVGLIVFFAFFYTA
                     IVFNPTETADNLKKHGGFIPGIRPGERTAEYIDYVLSRITVIGAAYLAIVCLFPEMLI
                     SYAAVPFYFGGTSLLIVVSVTMDTVAQVQGYLLAHQYEGLIKRSKLRGRRR"
     gene            complement(7809..8300)
                     /gene="rplO"
                     /locus_tag="VNY79_00135"
     CDS             complement(7809..8300)
                     /gene="rplO"
                     /locus_tag="VNY79_00135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HWX70883.1"
                     /translation="MKLHELADRPGARKTGKRIGRGIGSGKGKTGGRGGKGQTARSGV
                     RIKGFEGGQMPLHRRLPKRGFKNVKFARKLNEINLGRLQQAIDAGRLDAAGKIDAAAM
                     VKAGVLRRALEGVRVLGGGEIKAKVALSVYGASKSAVAAVEKAGGTVEILAPRPETSE
                     QAA"
     gene            complement(8428..8628)
                     /gene="rpmD"
                     /locus_tag="VNY79_00140"
     CDS             complement(8428..8628)
                     /gene="rpmD"
                     /locus_tag="VNY79_00140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HWX70884.1"
                     /translation="MNTSKSAGKTIKVQQTGSPMRRHHRQRETLVGLKLNKIGRVAEL
                     VDTPQTRGMIAKVAHLLRVVEE"
     gene            complement(8655..9215)
                     /gene="rpsE"
                     /locus_tag="VNY79_00145"
     CDS             complement(8655..9215)
                     /gene="rpsE"
                     /locus_tag="VNY79_00145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HWX70885.1"
                     /translation="MAREPRERRGGEERDSEFVDKLVHINRVAKVVKGGRRFGFAALV
                     VVGDQKGRVGFGHGKAREVPEAIRKATEAAKRGLTRVPLREGRTLHHDVAGRHGAGRV
                     YLRAAPPGTGIIAGGPMRAVFETLGMQDVVAKSLGTSNPYNVVRATFDALKRQDSPRA
                     VAARRNVKVSVLQARRRDIEAEQAAD"
     gene            complement(9253..9615)
                     /gene="rplR"
                     /locus_tag="VNY79_00150"
     CDS             complement(9253..9615)
                     /gene="rplR"
                     /locus_tag="VNY79_00150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HWX70886.1"
                     /translation="MTKLSDRIDRRRGRVRGMLARAAHGRTRLSVFRSSKHIYAQVID
                     DDRGVTVASASSIEKATREGFKTGASVDAAKAVGKLIAERAKEKGVKDVVFDRGGYLY
                     HGRVKALADAARESGLNF"
     gene            complement(9627..10160)
                     /gene="rplF"
                     /locus_tag="VNY79_00155"
     CDS             complement(9627..10160)
                     /gene="rplF"
                     /locus_tag="VNY79_00155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004685699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HWX70887.1"
                     /translation="MSRIGKKAIAVPAGITANVEGQTVKVKGPKGALQVVLHDDVAVK
                     LDGGEIKVDPRAETKGARAQWGTSRTLIANLIAGVTKGFERRLEISGVGYRASVQGKN
                     LQLALGYSHDIVYPIPEGIAIATPRPVEIVISGIDRQKVGQVAAEIREYRPPEPYKGK
                     GIKYAGERIFRKEGKKK"
     gene            complement(10164..10559)
                     /gene="rpsH"
                     /locus_tag="VNY79_00160"
     CDS             complement(10164..10559)
                     /gene="rpsH"
                     /locus_tag="VNY79_00160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HWX70888.1"
                     /translation="MSMNDPLGDLLSRIRNAQMRNKSKVLSPNSRLRENVLGVLKNEG
                     YIRGYAVVEREGRSEIEIELKYFDGEPVIREIERISKPGRRVYTSVKNLPRINNGLGV
                     AIVSTPKGVMADHDARDANVGGEILCTVF"
     gene            complement(10575..10880)
                     /gene="rpsN"
                     /locus_tag="VNY79_00165"
     CDS             complement(10575..10880)
                     /gene="rpsN"
                     /locus_tag="VNY79_00165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HWX70889.1"
                     /translation="MAKKSAIEKNSRRRRLAKKFSGRRARLKAVARDRTKPVEERFAA
                     VLKLAELPRNSSATRIRNRCEVTGRPRGYYRKHKLSRIALRDLGSKGLIPGLLKSSW"
     gene            complement(10928..11470)
                     /gene="rplE"
                     /locus_tag="VNY79_00170"
     CDS             complement(10928..11470)
                     /gene="rplE"
                     /locus_tag="VNY79_00170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016917725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HWX70890.1"
                     /translation="MPARLKVQFEETIRGKLAEQFGYKNRFEIPVLDKIVVNMGIGEG
                     VADRKKVESAAADLALIAGQRAVITKARKSIATYKLRAGQAIGCKVTLRKARMYEFLD
                     RLITIALPRVRDFRGLSPKSFDGRGNYTLGIKEHIVFPEIDYDNAADIWGMDITVCTT
                     ARNDDEARALLTAFNFPFRQ"
     gene            complement(11694..12020)
                     /gene="rplX"
                     /locus_tag="VNY79_00175"
     CDS             complement(11694..12020)
                     /gene="rplX"
                     /locus_tag="VNY79_00175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HWX70891.1"
                     /translation="MAAKIRKGDSVVVIAGRDKGRTGEVIEVRRDHGRVLVRGINMVK
                     RHQRQSASQEGGIISKEAPIHLSNVALADPKDGKPTRVGFKFEGKGDDRKKVRFAKRS
                     GVDIHG"
     gene            complement(12020..12388)
                     /gene="rplN"
                     /locus_tag="VNY79_00180"
     CDS             complement(12020..12388)
                     /gene="rplN"
                     /locus_tag="VNY79_00180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011567679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HWX70892.1"
                     /translation="MIQMQTNLDVADNSGARRVMCIKVLGGSKRKYATIGDVIVVSVK
                     EAIPRGRVKKGDVMKAVIVRISKDIKRPDGSIIRFDRNAAVLINPQMEPVGTRIFGPV
                     PRELRAKNHMKIISLAPEVL"
     gene            complement(12426..12674)
                     /gene="rpsQ"
                     /locus_tag="VNY79_00185"
     CDS             complement(12426..12674)
                     /gene="rpsQ"
                     /locus_tag="VNY79_00185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HWX70893.1"
                     /translation="MPKRSLQGVVVSDKQDKTLVVRVERRFTHPLFKKTVRRSKKYYA
                     HDEKNEFKIGDIVWIEEHRPISKLKRWAVVRGEKKQAS"
     gene            complement(12686..12883)
                     /gene="rpmC"
                     /locus_tag="VNY79_00190"
     CDS             complement(12686..12883)
                     /gene="rpmC"
                     /locus_tag="VNY79_00190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HWX70894.1"
                     /translation="MKVADIRAMTVDQIDDEVLKLKKEQFNLRFQRATGQLENTTRVR
                     EVRRDIARLKTIVRQKRTPKS"
     gene            complement(12891..13304)
                     /gene="rplP"
                     /locus_tag="VNY79_00195"
     CDS             complement(12891..13304)
                     /gene="rplP"
                     /locus_tag="VNY79_00195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HWX70895.1"
                     /translation="MLQPMRMKFRKAHKGRIHGRASSAVSLAFGQFGLKALEPERITA
                     RQIEAARRALTRHMKRSGRVWIRVFPDVPVSKKPLEVRMGSGKGTPELWVARVKPGRI
                     LFEIDGVSVEVAKESLALAAAKLPIKTRFVERISE"
     gene            complement(13341..14039)
                     /gene="rpsC"
                     /locus_tag="VNY79_00200"
     CDS             complement(13341..14039)
                     /gene="rpsC"
                     /locus_tag="VNY79_00200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000312 - plastid small ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HWX70896.1"
                     /translation="MGQKVNPIGLRLGINRTWDSRWFAGKTSYGSLLHEDMKIRQALM
                     KELKQAAVSKIVIERPHKKCRVTIHSARPGVVIGKKGADIEKLRRKVAELTDSDVVIN
                     IVEIRKPELDAQLVAESIAQQLERRVAFRRAMKRAVQSAMRLGAGGIRINCSGRLGGA
                     EIARMEWYREGRVPLHTLRADVDYGIATAFTTYGTCGVKVWIFKGEIMEHDPMAQDKR
                     MAEAEAGRPRRDAA"
     gene            complement(14055..14435)
                     /gene="rplV"
                     /locus_tag="VNY79_00205"
     CDS             complement(14055..14435)
                     /gene="rplV"
                     /locus_tag="VNY79_00205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HWX70897.1"
                     /translation="MSKKARERSLSDTEAKAVARMLRVSPQKLNLLAQLIRGKKVAAA
                     LADLEFSRKRIARDVRKCLESAIANAENNHDLDVDDLVVVQAHVGKALVLKRHMPRAR
                     GRAGKIFKPFSNLTIVVREVEAQA"
     gene            complement(14536..14808)
                     /gene="rpsS"
                     /locus_tag="VNY79_00210"
                     /pseudo
     CDS             complement(14536..14808)
                     /gene="rpsS"
                     /locus_tag="VNY79_00210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562838.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
     gene            complement(14981..15811)
                     /gene="rplB"
                     /locus_tag="VNY79_00215"
     CDS             complement(14981..15811)
                     /gene="rplB"
                     /locus_tag="VNY79_00215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HWX70898.1"
                     /translation="MALKSYNPVTPGQRQLVLVDRSGLHTGAPVKALTEGANSSGGRN
                     NGGGITSRYRGGGHKKAYRKIDFKRRRFDAPAKVERLEYDPNRTGFIALIKYEDGELA
                     YILAPQRLAAGDTVVAGEYVDVKPGNAMPLANIPVGTIIHNIELKVGKGGQIARSAGT
                     YAQIVGRDGAYVILRLNSGEQRLAHGRCIATVGAVSNPDNMNISIGKAGRTRWMGRRG
                     HVRGEAMNPVDHPLGGRTRGGRHPVTPWGKPTKGRKTRKNKATAKFIMLSRHARKKKK
                     "
     gene            complement(15824..16123)
                     /locus_tag="VNY79_00220"
     CDS             complement(15824..16123)
                     /locus_tag="VNY79_00220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HWX70899.1"
                     /translation="MSTKDPRHYDVIIAPVITEKATNASEQSKVVFKVTLAATKPQIK
                     EAVEKLFDVKVKSVNTLRRRGKWKAFRGRYGLQAETKRAIVTLEEGQRIDVTTGL"
     gene            complement(16120..16740)
                     /gene="rplD"
                     /locus_tag="VNY79_00225"
     CDS             complement(16120..16740)
                     /gene="rplD"
                     /locus_tag="VNY79_00225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HWX70900.1"
                     /translation="MELKVTTLDGKESGSVTVSDAIFGLEPRTDIIQRCVVWQLAKRQ
                     RGTHEVKNRAEINRTGKKMYRQKGTGSARHGSARVNLFRGGGRSFGPHTRSQAIGLPK
                     KVRALALRHALSAKAKDDGIIVIEALSLKEAKTKALRNQFAKLGLSNALIIDGAEVGA
                     DVRTAARNLPNIDVLPVAGINVYDVLRRHKLVLTRAAVDALEARFK"
     gene            complement(16742..17506)
                     /gene="rplC"
                     /locus_tag="VNY79_00230"
     CDS             complement(16742..17506)
                     /gene="rplC"
                     /locus_tag="VNY79_00230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HWX70901.1"
                     /translation="MRSGVIAQKIGMMRLFTESGEHVPVTVLRLGNCQVVSHRTKEDN
                     GYVALQLGSGVRKVQRTTKADRGHFAVAKVEPKRKLAEFRVDADALIPVGAEITADHF
                     VVGQYVDVTGTSTGKGFAGPMKRWNFAGLRASHGVSASHRSHGSTGGRQDPGKTFKNK
                     KMAGHMGVERVTTLNLKVMQTDVERGLILVEGAVPGVKGGWIMVRDAVKKKLPDGVPK
                     PGKFKLAGAAAEAGAAAETAAPPEPTAPAEPAAKGA"
     gene            complement(17526..17834)
                     /gene="rpsJ"
                     /locus_tag="VNY79_00235"
     CDS             complement(17526..17834)
                     /gene="rpsJ"
                     /locus_tag="VNY79_00235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005773267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HWX70902.1"
                     /translation="MNGQNIRIRLKAFDHRILDASTREIVNTAKRTGAQVRGPIPLPT
                     RIEKFTVNRSPHIDKKSREQFEMRTHKRLLDIVDPTPQTVDALMKLDLAAGVDVEIKL
                     "
     gene            complement(17938..19128)
                     /gene="tuf"
                     /locus_tag="VNY79_00240"
     CDS             complement(17938..19128)
                     /gene="tuf"
                     /locus_tag="VNY79_00240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HWX70903.1"
                     /translation="MAKEKFQRTKPHCNIGTIGHVDHGKTTLTAAITKVLAEKGQAKF
                     TAYDQIDKAPEEKARGITIATAHVEYETDKRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLARQVGVPALVVYLNKVDMVDDPELLELVELEVRELLSK
                     YNFPGDKIPVVKGSALMALEGNNEELGKTSIGALMKAVDEYIPQPERPKDQPFLMPVE
                     DVFSISGRGTVCTGRIERGVIKVGEEVEIVGIRPTQKTVVTGVEMFRKLLDQGEAGDN
                     VGCLLRGTKREEVERGQVLCKPGSVKPHTKFKAEAYILTKEEGGRHTPFFTNYRPQFY
                     FRTTDVTGVVTLPEGTEMVMPGDNIAMEVTLIVPIAMEEKLRFAIREGGRTVGAGVVA
                     SIVE"
     gene            complement(19194..>19838)
                     /gene="fusA"
                     /locus_tag="VNY79_00245"
     CDS             complement(19194..>19838)
                     /gene="fusA"
                     /locus_tag="VNY79_00245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004447767.1"
                     /note="EF-G; promotes GTP-dependent translocation of the
                     ribosome during translation; many organisms have multiple
                     copies of this gene; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HWX70904.1"
                     /translation="PQVAYREKITRPATVDHTHKKQTGGHGQFARIKIIAEPTTPGVG
                     FEFENDVVGGAVPKEFVPAVEKGLEAMLGAGVLAGFPVVDVKVSLVDGASHDVDSSAM
                     AFEICARSAMREALQKGAPVLLEPIMKVEAVTPEEYTGSVIGDLNSRRGQIQGQDMRG
                     NANVITAMVPLANMFSYVNNLRSMSQGRATFTMQFDHYEQVPQAVAAEVQAKYA"
BASE COUNT         2939 a         6622 c         6457 g         3820 t
ORIGIN      
        1 aatttgtgcc ggccgagttt ttcgggaaaa taatcctggc cggaaaatgc gtcctcggcg
       61 tcgtggtcgt attcgtagcc cgagccgtaa ccttcgcttt tcatcagccg ggtcggtgcg
      121 ttgagaatgt gcttcggcgg caggagcgag cccgcctcct tcgccgtgcg catcgcttcg
      181 ccgaacgcca cgtaggttgc gttcgatttc ggggcggtgg cgaggtagat caccgcttcg
      241 gcaatggcga gctcgccttc cggcgagcca aggaaatcgt aggcttcctt cgcggcattg
      301 gcgacgacga gcgcctgcgg gtccgcgagc ccgatatcct cgaccgccat gcgcacgatg
      361 cggcgcgcca gatacagcgg atcctcgccg gcatcgagca tgcggcagag ataatagagc
      421 gcagcgtcgg catcggagcc gcgcaccgat ttgtgcagcg cactgatcag attgtagtgg
      481 ccgtcctgcg ccttgtcgta gatcggggcg cggcgctgca ccacctgctg cagggcggcg
      541 gcgtcgaagc tttcgccgtg gcgggccgcg cgccagacct cttcggcaag cgtgagcgcg
      601 gcgcggccat cgccgtcggc catgcggata agcgaggcgc gcgcgtcctc gtcgagcggc
      661 agcgtcttgc cttcggcggc ttcggcgcgt tcgagaagct ttcccagcgc ggcggcgtcg
      721 agcggcttga atacaagcac gcgagagcgc gagaggagcg gcgcgatcag ctcgaacgag
      781 gggttctcgg tggtggcccc gacgagcacg atggtgccgt cctcgaccac gggcaggaag
      841 gaatcctgtt gcgcgcggtt gaaacggtgg atctcgtcga cgaagaggag cgtcccctgc
      901 cccgtttccc ggcgctgccg ggcggcgtca aaaaccttct tgaggtcggc gacgccggag
      961 aagatcgcgg agatctgctc gaagtgaagc tcggtggccc gcgccagcaa ccgcgccacc
     1021 gtggtcttgc cggtgccggg cgggccccag aagacgagcg agccgagcga gcgcgtctcc
     1081 agcatgcgcg tgagagcgcc gtcgggcccc agcagatgat cctgcccgac cacgtcggcg
     1141 agctggtcgg ggcgcagctt gtcggcaagc ggccgcggcg cgtcgcgctc aagaccggcg
     1201 gccgcgaaca ggctcggcgt gctcttcttc gggcgcgagg tcatggcccg ctcgtccact
     1261 tcacctctcc cgttccggga gagggtatgc ggaaacgcac acgagcgggc tcatccactg
     1321 agcacgaccg aaatctgctg cccgccgcgt acgatggtga tgtgccattg ccggctgccg
     1381 gcattgacga tgcggtcgag atccgtcggc ttggcgatct tctgattgtt gaccgacagc
     1441 acgatgtcgc ccttctggaa acccagcgac cgcgccggcg agccgtcggc gaccgcggtg
     1501 acgacgacgc cctccgtttg cgggtcgagc cgcagctcgt cggccagcgc cggcgaaaga
     1561 ttggccacgg tcacgccgag gaacggcgag cggccgcgga tttcgagctc gttccgcggc
     1621 gtgtcaggca ggccctgcag cgctacggga acggcgacct ccttgccctg gcggacgagg
     1681 ccgatctgcg cggtgccacc cagcgccttc gtggcgaacc ggtagtcgaa ggcgttggga
     1741 tcgtcgacca gcgtgccgtc gatgctgacg atgaggtcgc cggttctgat gccggcgcgt
     1801 gccgccggcc cgccggaggc gacgttggcg accagcgcgc cgcttggccg cttgaggccc
     1861 atgctttcgg cgatttccgg cgtgacttcc tgcagcttgg cgcccagcca gggccgcttg
     1921 accgcgccgc ttccaccctt ggccgaggcg accacaacgc gcaccatgtt cgccgggatg
     1981 gcgaagccga tcccctgcga gccgcccgag cgcgagtaga tcgccgtatt gatgccgacg
     2041 agccgccctg cggcgtcgac cagagcgccg ccggaattgc ccggattgat ggcggcgtcg
     2101 gtctgtatga aaaaccgata gtcgctgatg ccgacctgcg tgcgcgcgac cgcggacacg
     2161 atgccgtgcg tcaccgtctg cccgacaccg aacggatcgc cgatcgccag cacgacgtcg
     2221 ccgacctgca gctcgtcgga attgccgaac tccagcaccg ggaagcgttc gttggcgccc
     2281 ttgatgcgca ggatggtgag atcgctgtgc tcgtccttga gaacgatctc agcctcgaac
     2341 tcgcgcttgt cggcgagcga gatcttcacc gcgctcgcgc cctcgatcac gtggttgttg
     2401 gtgaccacga gcccggaggg atcgacgatg acgccggagc cgagggagcg ctgcacctgc
     2461 tcgcgcggca cggcgccgaa gaactggcgg aagaacgggt cgttcatgaa cgggttgcgg
     2521 ttctcgatga cgcgagccgc atagacgttg accacagccg gcgccacgcg ccgcaccacc
     2581 ggggcaaagg agagctgaac ctcggcaggt ccggacggca cgcgccgctc ctgcgcgctg
     2641 gcgctttgca gcaatggggt aagcgcgctt acagcggcgg cgagtaaggc ggcgcagacg
     2701 cgcagatccg gcatgaaacg accccagatc ggcgctgcca cgtataggcc cacgagccgg
     2761 cctctagaag agtgaggcga gcttacgcgg cggcaggcgc cggcgtttcc acggggtggg
     2821 cctcgaccgg cccggaatcc ttgcccttcg cctcgacgtc gcggtcgacg aactcgatca
     2881 ccgccaccgg cgccgaatcg ccatagcgga agccggcctt gagcacgcgg agatagccgc
     2941 cgttgcgtcc ctgatagcgt gggccgatta cttcgaagag cttcttgacc atggcgaggt
     3001 cgcgcatctg cgcgatcgcc tgccggcgcg catgcaggtc gccgcgctta ccgagggtga
     3061 ccagcttctc caccaccggc cgcaggtctt tcgccttggg cagcgtggtc gtgatctgct
     3121 cgtgcttgat cagcgaggca gcgaggttcg ccagcatcga gcggcgatga tcggagcgcc
     3181 gattgaatcg acggtgggtc ttggcgtggt gcactgaatc tctcctacgc tcctttcgtc
     3241 attccggccg agcgcagcga gagccggaaa tccatagtcg cgatccaagc agtacctctc
     3301 gaacggcggt tatgggttcc gggttggcgc cttcggcgcg ccccggaacg acgagcctca
     3361 gtaatgatcc tcgaatcgct tggccagctc ctcgatgttc tccggcggcc agccggggac
     3421 ttccatgccg agatgcaggc ccatctgcac cagcacttcc ttgatctcgt tgagcgactt
     3481 gcggccgaag ttcggcgtgc gcagcatctc ggcctcggtc ttctgcacga ggtcgccgat
     3541 gtagacgatg ttatcgttct tcaggcagtt cgccgagcgc accgagagct cgagttcgtc
     3601 gaccttcttg aggaaggccg ggttgaaggc gagatcgggg atcgcctcct gcgcggtttc
     3661 gcgcttgggc tcctcgaagt tcacgaacac gttgagctgg tcctgcagga tgcgcgcggc
     3721 gtaggcgagc gcatcgtcgg gggtcacggc gccgttcgtc tcgatcgaca gcgtcagctt
     3781 gtcgtagtcg aggatctggc cttcgcgcgt gttctccacc ttgtaagaga ccttgcgtac
     3841 cggcgagaac aagctgtcga cagggatgag cccgatcggc gcgtcctccg gccggttgcg
     3901 ttcggccggc acgtagccct ttccggtatt gacggtgaat tccatgcgga tctcggcgcc
     3961 ctcgtcgagc gtgcacagga cgaggtcggg attgagcacg acgatgtcgc cgacggtttg
     4021 aatgtcgctt gcggtcaccg tgcccggacc ctgcttcttc accaccatgc gcttgggccc
     4081 gtcgccctgc atcttgatgg cgatgtcctt gatgttgagc acaatgtcgg tcacgtcctc
     4141 gcgcacgccg gcgatcgagg aaaattcgtg cagcacgccg tcgatgtgca ccgactgcac
     4201 cgcggcgccc tgcagcgagg acaacagaat gcgccgcagc gcgttgccga gtgtcacgcc
     4261 gaagccgcgc tccagcggct cggcgaccac cgtggccgcg cgccgcgcgt cgccgccggc
     4321 gctgacctgc agcttgctcg gcctgatcag ttcctgccaa ttcttctgga tcgtcacgtt
     4381 gtcacccatc gcgttgcgcg gcgcaattgt gccgcgcgcc ccgctccgct cagcggggcg
     4441 aaggtcgagc ggcggcagat gttgttccac atgttccatc ggccggatgt cctatacgcg
     4501 ccgccgcttg cgcgggcggc atccattgtg cgggatcggc gtcacgtcgc ggatcgaggt
     4561 aatggtgaag ccggcggcct gcagcgagcg cagcgccgat tcccgccccg agccgggacc
     4621 cgcgacctcg acttcgagtg tgcgcatgcc gtgctcctgc gccttcttgg ccgcatcctc
     4681 ggcggcgacc tgcgccgcat agggcgtcga tttgcgcgaa cccttgaaac ccatggtgcc
     4741 tgccgacgac caggcgatcg tattgccctg cacgtcggta atcgtgatca tcgtgttgtt
     4801 gaacgtcgca ttcacgtgcg caacgccgga ggcgatgttc ttacgttcgc gccggcggac
     4861 gcgcgtggct tcctttccca ttctgaaccc tttcgcggag cggaaccggc cgttccggta
     4921 ccgtcatgta atcctgcgta acgcgctatt tcttcttgcc ggcaatcggt ttggccggac
     4981 ccttgcgggt gcgtgcgttg gtatgggtac gctgcccgcg taccgggagg ccacggcgat
     5041 ggcgcaagcc gcgatagcag cccaaatcca tcagccgctt gatgttcatg gcgacctcgc
     5101 gccgcagatc gccctcgacg acatagtcgc ggtcgatcac ctcgcgcagc tgcagcactt
     5161 cctgatcggt cagctgcgac acccgccgcg cgtcgggcat cgataccttg tgcatgattt
     5221 ccttggcctt ggctgggcca atgccatgga tgtactgcaa ggcaaccacg acgcgcttgt
     5281 tggtggggat attgacgcca gcgatacgag ccacgtcagt tctccttgtg cggaccggtc
     5341 ccggatgcgc ccaggctgcc gccgctatgt aacgatgcca atgtcacccg agaaggccac
     5401 aaacgtaaaa cgccaacgca tgcctgccgc tacggcttgg caccgctgcc acatctccga
     5461 ctggatattt ggtgcttatt aatggattgc ctgtgctttc gtcaacctcg actagcgata
     5521 tcgtgtacaa ctccgcctac cgcttacggt ttccggcctt tggcctgcgc gcggcgcctc
     5581 ttcgcgccgt ccggtcgact ttcgtccgcg ccgcggccgg gcgacgccga gccgcaggcg
     5641 gcgcctttga cttttttcct atcttttttc ctatccgttt ttcaatcctt gggcggggcg
     5701 gcttgccgac ggcctttttg gcggcgggcc gcggcgcctt tggcgcggac tttggcagct
     5761 tcggcggggc tttggccgcc ttcccggcca gtaccttctc gatctcggcg gcaacttgcg
     5821 cgatgggtgc catgccgtcg agcgagcgca gcatgccctg caactgatag taggtaatga
     5881 gcggcgcggt ctggtcccgg tatgccgcca gacgccggtg cagcacctcg gggctgtcgt
     5941 catcgcgcaa tccctcgccc tgggccttca tggcggcgat ccggctttcg atgcgtcgga
     6001 tcagcgcagc ctcgtcgacc cgcagttcca cgaccgcatc gagggaaagg ccgcgctccg
     6061 cgagcatgcg atcaagtgcg accgcctgcg ccatggtacg agggaagccg tcgagaatga
     6121 atcccttgcg cgcgtccggc tgttcgatgc gctcggcgac gatctcgacg acgacgtcgt
     6181 ccggcaccag cgcgccgcgc gccatgatct cctgcacctc gcggccgagc ggcgttccgg
     6241 ccttgaccgc ggcgcgcagc atgtcgccgg tggagagctg cagaagtccg tatttggcga
     6301 cgagatgctg ggcctgcgtt cccttgccag cccccggcgg gcccagcaga atcaatctca
     6361 tctacggcgt cccctcagct tggagcgttt gatcaggcct tcgtattggt gtgccagaag
     6421 gtagccctgg acctgggcca ccgtgtccat ggtgacgctg accacgatca ggagtgacgt
     6481 gccgccgaaa tagaacggca ccgccgcgta ggagatcagc atttccggga acaggcatac
     6541 gatcgcgaga taagcggcac cgatcaccgt aatcctcgag agcacgtagt cgatgtattc
     6601 ggcggtacgc tcccccggac ggatgccggg gatgaacccg ccgtgtttct tcaagttgtc
     6661 ggcggtctcc gtcggattga acacgatcgc ggtgtagaag aaggcgaaaa atacgatgag
     6721 gccgacatag agcgcgagaa acaacggccg tccgtgtgag agctgcgtgg ttatcgtggt
     6781 gagccaaccc ggcccctggc cggcagtgaa attggcgacc gtggtcggca acaagaggag
     6841 cgaggaggca aagatcggcg ggatcacgcc cgaggtgttg agcttgagcg gcagatgcga
     6901 ggactggccc tcgaacatgc ggttgccgac ctggcgcttc gggtactgga tcaggaggcg
     6961 gcgctgcgcc cgttccatga acacgatgaa ggtgacgacc gcgaccgcca tcaccaggac
     7021 gatgagaatg agcccggtcg agagcgcgcc ctggcggccg agttcgagcg tgccggcgat
     7081 cgccgagggc aattgcgcga cgatgcccga catgatgatc agcgaagtgc cgttgccgat
     7141 gccgcgctgc gtgatctgct cgccgagcca catcaggaac atggtgccgc cagtgagcgt
     7201 gatcacggtg gagatgcgga agaacaggcc cggatcggtg accacgttgc tggctccttc
     7261 cagcccgacg gcgatgccgt aggcctgaaa cgccgccagc accacagtga gataccgcgt
     7321 gtactggttg atcatcttgc gcccggcctc gccctccttc ttgagctgct cgagcgtcgg
     7381 cgacaccgtc gtcatcagct gaatgatgat cgaggcggaa atgtacggca tgatgttgag
     7441 cgcgaagatc gccatgcggt ggatgccgcc accggcgaac atgttgaaca tgccgaggat
     7501 gccgccggcc tgggtgcgga aaatctggtc ccaggcgttg ggatcaatgc ccggcagcgg
     7561 gatgtaggtg ccgagccggt agacaagcag cgcgccgagc gtgaaccaga tgcgcttctt
     7621 caactcctcg gccttggcga gcgccccgaa gttgagattg gctgccagtt gttctgccgc
     7681 agagaccatc cgccgctccg agcctcctct gtcttcacgt cacggccggg cttgtccccg
     7741 gcccctacgc cttcgctgac acaggtagaa gtcgtggatg cccggcacaa ggccgggcgt
     7801 gacgcccctc acgccgcctg ttcgctcgtt tccggcctcg gcgcaaggat ctcgaccgtg
     7861 ccgcctgcct tctccaccgc ggccaccgct gatttcgatg ccccatagac cgagagcgcg
     7921 actttcgcct tgatctcgcc gccgccgaga acccgcaccc cctccagggc gcgccgcaga
     7981 acgccggctt tcaccatggc cgcggcgtcg atcttgccgg cggcgtccag gcggccggca
     8041 tcgatcgcct gttgcaggcg tcccagattg atctcgttga gcttgcgcgc aaatttcacg
     8101 ttcttgaagc cgcgcttggg caggcgccgg tgcagcggca tttggccgcc ctcgaagcct
     8161 ttgatgcgca cgccggagcg cgcggtctgc cccttgccac cgcggccgcc ggtcttgccc
     8221 ttgccggagc cgatgccgcg gccgatgcgt ttgcccgtct tgcgcgcgcc gggccggtcg
     8281 gcgagttcgt gcagtttcat tgtctcgtcc cttccgttcg accgtcattc ccgagccgcg
     8341 cctggagcga gcctcgaacg acgccggcca catgcccggc ccgtcgcctt tggcggccgc
     8401 gtcgcgcgtc tcgaggttac gggccgccta ctcctccacc acgcgcagga ggtgcgcgac
     8461 cttggcgatc atgccccgcg tctgcggcgt atcgacaagc tctgcgacac ggccgatttt
     8521 gttgagcttg aggccgacca gcgtctcgcg ctggcggtga tggcggcgca tcgggctgcc
     8581 ggtctgctgg accttgatgg tcttgcccgc gctcttcgac gtgttcatcg catgctcccg
     8641 gatgccgcgc tcgatcaatc ggccgcctgt tcggcctcga tgtcgcggcg gcgcgcctgc
     8701 agcaccgaga ccttgacgtt gcggcgcgcg gcaaccgcgc gcggggaatc ctgacgcttg
     8761 agggcgtcga aggtcgcgcg caccacgttg tacgggttcg aagtgccgag cgacttcgcc
     8821 acaacgtcct gcatgcccaa cgtttcgaac accgcgcgca tcgggccgcc ggcgatgatg
     8881 ccggtgccgg gcggggcggc gcgcagatag acgcggccgg cgccgtggcg gccggccacg
     8941 tcgtggtgca gcgtgcgccc ttcgcgcagc ggcacgcgag tgagcccgcg cttggccgcc
     9001 tcggtcgcct tgcggatcgc ctccggcacc tcgcgcgcct tgccgtggcc gaaaccgacc
     9061 cggcctttct ggtcgccgac gacgaccaag gcggcaaagc cgaagcggcg gccgcccttg
     9121 accaccttgg cgacgcgatt gatgtggacg agcttgtcga cgaattcgct gtcgcgctct
     9181 tcgccgcctc tccgctcgcg tggttcacgc gccatgttgc tcagccattt tgttcaaccc
     9241 ttggtcctgt catcagaaat tcagcccgct ctcgcgcgca gcgtcggcca gcgccttgac
     9301 ccggccgtga tagagatagc cgccgcggtc gaataccacg tctttgacgc ccttctcttt
     9361 ggcgcgctcg gcgatgagct tgcccacggc cttggccgcg tccacgctgg cgccggtctt
     9421 gaagccctcg cgcgtcgcct tctcaatcga ggaggcagac gcgaccgtga cgccgcgatc
     9481 gtcgtcgatc acttgggcgt agatgtgctt ggaggagcga aacaccgaca gccgcgtgcg
     9541 cccatgcgcc gctcgggcaa gcatgccgcg cacgcgtccc cgccgccgat cgatcctgtc
     9601 gctgagcttg gtcatcggcg gctccgttac ttcttcttgc cttccttgcg gaagatgcgc
     9661 tcgccggcgt acttgatgcc cttacccttg tagggctccg gcggccggta ttcgcggatc
     9721 tcggccgcga cctgcccgac tttctggcgg tcgatgccgc tgatcacgat ctcgaccggg
     9781 cggggcgtcg ctatcgcgat gccttccggg atcggataga cgatgtcgtg gctgtagccg
     9841 agcgcgagct gcaggttctt gccctggacc gaggcgcggt agccgacgcc gctgatctcc
     9901 aggcgccgct cgaatccctt ggtcacgccg gcgatcaggt tggcgatgag cgtgcgcgag
     9961 gtgccccatt gcgcacgcgc gcccttggtc tcggcgcgtg gatcgacctt gatctcgccg
    10021 ccatcgagtt tcaccgccac gtcgtcgtgc agcacgacct gcagcgcgcc cttcgggcct
    10081 ttcaccttta cggtctggcc ctcgacgttg gcggtgatgc cggcggggac tgcaatcgcc
    10141 ttttttccga tgcgcgacat gacctagaac accgtacaga gaatctcgcc gccgacattg
    10201 gcgtcgcggg cgtcatggtc ggccatgact cccttcggcg tcgagacgat ggcgacgccg
    10261 aggccgttgt tgatgcgcgg caggttcttg accgaggtat agacgcggcg gcccggcttg
    10321 gaaatgcgct cgatctcgcg gatgaccggc tcgccatcga aatatttcag ctcgatctcg
    10381 atctccgagc ggccctcacg ttcgaccacc gcatagccgc ggatatagcc ctcgttcttg
    10441 agcacgccga gcacgttctc gcgtagccgc gaattcgggc tcaagacctt gctcttgttg
    10501 cgcatctgcg cgttgcggat gcgggaaagg agatcgccca gcggatcgtt catcgacatc
    10561 ggaccagggc ctcctcacca gctcgacttc aacaggcccg gaatcaggcc cttggagccg
    10621 agatcgcgca gcgcgatgcg cgacagcttg tgcttgcggt agtagccgcg cggccgcccg
    10681 gtcacctcgc agcggttgcg gatgcgggtg gcagacgagt tgcgcggcag ttcggcgagc
    10741 ttgagcacgg cggcgaagcg ttcttccacc ggcttggtgc ggtcgcgcgc gaccgccttg
    10801 agccgcgccc gccggcccga gaatttcttc gccagccggc ggcgccggct gttcttctcg
    10861 atcgcactct tcttcgccat ttcggtctcc tcgcggttcc gcgtatgcgg cctttcttgc
    10921 gtcggcctca ctgccggaac ggaaaattga acgccgtcaa cagcgcgcgc gcctcgtcgt
    10981 cgttgcgcgc cgtggtgcac acggtgatgt ccatgcccca gatgtcggcg gcgttgtcgt
    11041 aatcgatctc cgggaacacg atgtgctcct tgatgccgag cgtgtagttg ccgcggccgt
    11101 cgaagctctt cgggctcagg ccgcggaagt cgcgcacgcg cggcagcgcg atggtgatca
    11161 gccggtcgag aaattcgtac atgcgcgcct tgcgcagcgt caccttgcag ccgatggctt
    11221 ggccggcgcg cagcttgtag gtggcgatcg atttgcgcgc cttggtgatc accgccctct
    11281 gtccggcgat aagcgcgaga tcggcggcgg ccgattccac cttcttgcgg tcggcaacgc
    11341 cttcgccgat gcccatgttg acgacgatct tgtcgagcac cggaatctca aagcgattct
    11401 tgtagccgaa ctgctcggca agcttgccgc gtatcgtctc ctcaaactgc accttgagcc
    11461 gcgccggcac tttcggctcc ggctcgcgcg gcgcggcggg cgctgccgcc ttctcgccct
    11521 tgccgtcggg cgcggccttg cccttctcgc ccttctccgg cttggccgcc ttggccccct
    11581 tgccgccctg ctcgcccttc gccgccttgg ccgctttctc cgccttgtcg gccttctcgg
    11641 gcttgccgga ctgctgcgac ttctccggct tcttttcctt cttctcgtcg gtatcagcca
    11701 tggatgtcga ctcccgaacg cttggcgaag cgcaccttct tgcggtcgtc gcccttgcct
    11761 tcgaacttga acccgacccg cgtcggcttg ccgtccttgg gatcggccag cgcgacattc
    11821 gagaggtgga tcggcgcctc cttggagatg atgccgccct cctgcgaggc gctctggcgc
    11881 tgatggcgct taaccatgtt gatgccgcgc acgagcacgc ggccgtggtc gcggcgcacc
    11941 tcgatcacct cgccggtacg gcccttgtcc cggccggcga tcaccacgac gctatcgccc
    12001 ttcctgatct tcgccgccat cacagcacct cgggcgcgag cgaaatgatc ttcatgtggt
    12061 tcttcgcccg cagctcgcgc ggcaccgggc cgaagatgcg ggtgccgacc ggctccatct
    12121 gcgggttgat cagcaccgcg gcgttgcggt cgaagcggat gatcgagccg tcggggcgct
    12181 tgatgtcctt ggagatgcgc acgatgaccg ccttcatcac gtcgcccttc ttgacgcggc
    12241 cgcgcgggat cgcctccttc accgacacga cgatgacgtc gccgatggtg gcgtatttgc
    12301 gcttggagcc gcccagcacc ttgatgcaca tgacgcggcg cgcgccggaa ttgtccgcca
    12361 cgtcgagatt ggtctgcatc tggatcatgg gctaccccat tcactccaat tcgatcacgc
    12421 cgcggtcagg acgcctgctt tttctcgccg cgcaccacgg cccagcgctt gagcttggag
    12481 atcggccggt gctcctcgat ccacacgatg tcgccgatct tgaactcgtt cttctcgtcg
    12541 tgcgcgtaat atttcttcga gcggcgcacc gtcttcttga acagcggatg ggtgaagcga
    12601 cgctccacgc gcaccaccag cgtcttgtcc tgtttatcgc tcaccacgac gccttgcagg
    12661 ctgcgcttgg gcatcttcgg tcctttcagc tcttcggcgt gcgcttctgc cgcacgatgg
    12721 tcttgagccg ggcgatatcg cgccgcacct cgcgcacccg cgttgtgttt tccaattgcc
    12781 cggtggcgcg ctggaagcgc aggttgaact gctccttctt gagcttgagc acctcgtcgt
    12841 cgatctggtc gacggtcatc gcccggatat cggctacctt catgacacgc ctactcgctg
    12901 atgcgctcga cgaagcgcgt cttgatcggc agcttggccg cggccagcgc cagcgattcc
    12961 ttggccacct cgacgctgac gccgtcgatc tcgaacagaa tgcggcccgg cttgacccgc
    13021 gccacccaca gttccggcgt gcccttgccc gagcccatgc gcacctcgag cggcttcttc
    13081 gagactggca cgtccgggaa gacgcggatc cagacgcggc ccgagcgctt catgtgccgg
    13141 gtcagagcgc ggcgcgcggc ttcgatctgc cgcgccgtga tccgctcggg ctcgagcgcc
    13201 ttcaagccga actggccgaa ggcgagcgac accgcacttg aggcgcggcc gtggatgcgg
    13261 cccttgtgcg ccttgcggaa tttcattcgc atcggttgca gcatggcgga cgccttttct
    13321 cactaagctt ttctgctcgc tcacgccgca tcgcgccgcg gccggccggc ctcggcttcg
    13381 gccatgcgct tgtcctgcgc catcggatcg tgctccatga tctcgccctt gaagatccag
    13441 accttgacgc cgcaggtgcc gtaggtggtg aacgcggtgg cgatgccgta atcgacgtcg
    13501 gcgcgcagcg tatgcagcgg cacgcggccc tcgcgatacc attccatgcg cgcgatctcg
    13561 gcgccgccga gccggccgga gcagttgatg cggatgccgc cagcgccgag ccgcatcgcc
    13621 gactgcaccg cgcgcttcat ggcgcggcgg aaagcgacgc ggcgctcaag ctgctgggcg
    13681 atcgattcgg cgacaagctg cgcgtcgagc tcgggcttgc ggatttcgac gatgttgata
    13741 acgacgtcgc tgtcggtaag ctcggcgacc ttgcgccgca gcttctcgat atcggcgcct
    13801 ttcttgccga tgacgacgcc ggggcgcgcc gagtggatgg tgacgcggca cttcttgtgc
    13861 ggccgctcga tcacgatctt cgacaccgcc gcctgcttga gctccttcat tagggcttgg
    13921 cggatcttca tatcctcgtg cagcagcgac ccatagctgg tcttgccggc aaaccagcgc
    13981 gaatcccagg tgcggttgat gcccagccga agcccgatcg gattgacttt ctgacccata
    14041 tttctctccc ggccctaggc ctgcgcctcg acctcacgca ccacgatggt gaggttcgag
    14101 aacggcttga aaatcttgcc ggcgcggccg cgcgcgcgcg gcatgtggcg cttgagcacc
    14161 agcgccttgc cgacatgcgc ctgcaccacg acgaggtcgt cgacgtcgag gtcgtgattg
    14221 ttctcggcgt tggcgatggc tgattccagg cacttgcgca cgtcgcgggc gatgcgcttg
    14281 cgcgagaatt cgagatcggc gagcgcggcc gcgaccttct tgccacggat gagctgcgcc
    14341 agcaggttga gcttctgcgg gctcacccgc agcatgcggg cgacggcctt cgcctcagtg
    14401 tcggagaggg agcgctcccg cgccttcttg ctcatggacg ctgctcccgc ctcacgatgt
    14461 gccgcccgcg ggcgcggatg ccggcgcggc ggccggcgcc gcactcgaag ctgccggcgc
    14521 tcccggcccg gaggcacgct tggccttgcg gtccgaggaa tgaccgtaga acgagcgcgt
    14581 cggcgcgaac tcgccgaact tgtgcccgac catctcctcg gtgacgatca ccgggatgtg
    14641 cttctggccg ttgtagacgc cgaaggtgag cccgacgaac tgcggcagga tggtggagcg
    14701 gcgcgaccag atgcggatca tctcgtggcg acccgacgac cgcgctgcat ccgccttctt
    14761 gagcagatag ccgtcgacaa acggaccctt ccagaccgaa cgcgccatat cgcctacccc
    14821 tttaaccgac acgcgggcct gctgaccgtc atcctgaggt gcgagcgaag cgagcctcga
    14881 aggatgagcg gccgatgagc cccggccgtc gcccttcgag gctcggcgct gcgcgccgag
    14941 catctcaggg tgacggaatg aagatcgatt tccatcacac tcactttttc ttcttccgcg
    15001 cgtggcggct cagcatgatg aacttcgccg tcgctttgtt cttgcgggtc ttgcggccct
    15061 tggtcggctt gccccacggc gtcaccggat ggcggccgcc gcgggttcgc ccgccgagcg
    15121 gatgatccac cggattcatc gcctcgccgc ggacatggcc gcgccggccc atccagcgcg
    15181 tgcgccccgc tttgccgatc gagatgttca tgttgtcggg gttcgacacc gcgccgaccg
    15241 tggcgatgca gcggccatgc gccagccgct gctcgccgga attgagccga aggatgacgt
    15301 aggcgccgtc gcggccgacg atctgcgcat aggtgccggc cgaacgcgcg atctgaccgc
    15361 ccttgccgac cttgagctcg atgttgtgga tgatggtgcc gaccggaatg ttggcgagcg
    15421 gcatggcgtt gccgggcttt acgtcgacat attcgccggc caccaccgtg tcgccggcgg
    15481 caaggcgttg cggcgccagg atgtaggcga gttcgccgtc ctcgtatttg atcagtgcga
    15541 tgaagccggt gcggttcgga tcgtattcga ggcgctcgac cttggccggc gcatcgaacc
    15601 ggcggcgctt gaagtcgatc ttgcggtagg ccttcttgtg gccgccgccg cggtagcgcg
    15661 aggtgatgcc cccgccgttg ttgcggccgc cgctcgaatt cgccccctcg gtcagcgcct
    15721 ttaccggcgc accggtatga aggcccgagc ggtcgacgag gacgagttgc cgctggccag
    15781 gcgtgaccgg attgtagctc ttgagtgcca tcgcgcccgc tccctacagt cccgtggtca
    15841 cgtcgatgcg ctgaccctct tccagggtca cgatggcgcg cttggtttcc gcctgcagcc
    15901 cgtagcggcc gcggaacgcc ttccacttgc cgcgccgccg cagcgtgttc acgctcttga
    15961 ccttcacgtc gaacagcttc tccaccgctt ccttgatctg cggcttggtc gccgccagcg
    16021 tcaccttgaa caccaccttg ctctgctcgg aggcgttggt cgccttctcg gtgatcaccg
    16081 gcgcgatgat cacgtcgtag tggcgcggat ccttggtgct catttgaatc gtgcctccag
    16141 cgcgtcgacc gcggcgcgag tgagcaccag cttgtgccgg cgcagcacgt catagacgtt
    16201 gataccggcg accggcagca cgtcgatgtt cggcagattg cgcgccgccg tgcgcacgtc
    16261 ggcccccacc tcggcgccgt cgatgatcag cgcgttggag aggccgagct tcgcgaactg
    16321 gttgcgcagc gccttggtct tcgcttcctt caagctcagc gcctcgatga cgatgatgcc
    16381 gtcgtccttg gccttggccg agagcgcgtg cctgagcgcg agcgcgcgca ccttcttcgg
    16441 caggccgatg gcctgactgc gcgtgtgcgg cccgaacgag cggccaccac cgcggaacag
    16501 gttgacccgc gccgacccgt ggcgggccga gccggtgccc ttctgccggt acatcttctt
    16561 gccggtgcgg ttgatctcgg cgcggttctt cacctcgtgg gtgccgcgct ggcgtttggc
    16621 gagttgccac accacgcagc gctgaatgat gtcggtgcgc ggctcgagcc cgaaaatggc
    16681 atcggacacc gtaaccgagc cggattcctt gccgtcgagg gtggtgactt tgagctccat
    16741 gtcacgcgcc ctttgctgct ggctcggcgg gcgcggtagg ctcgggcggc gccgccgtct
    16801 ccgctgccgc gccggcctcg gctgccgcgc cggcgagctt gaacttgccg ggcttcggca
    16861 cgccgtcggg aagtttcttc ttcaccgcgt cgcgcaccat gatccagccg cccttgacgc
    16921 cggggacggc gccctcgacc aggatcagtc cgcgctcgac gtcggtctgc atgaccttca
    16981 gattgagcgt ggtcacgcgc tcgacgccca tgtgccctgc catcttcttg ttcttgaagg
    17041 tcttgcccgg atcctgccgg ccgccggtcg agccgtgcga gcggtgggag gccgaaacgc
    17101 cgtggctcgc ccgcagccca gcgaagttcc agcgcttcat cgggccggcg aaacccttgc
    17161 cggtcgaagt accggtcacg tcgacatact ggccgacgac gaagtggtcg gcggtgatct
    17221 cggcgccgac cgggatcagc gcgtcggcat cgacgcgaaa ctcggcgagc ttgcgcttgg
    17281 gctcgacctt ggcgacggcg aaatggccgc ggtcggcctt ggtcgtgcgc tgcaccttgc
    17341 gcacgccgga gccgagctgg agcgcgacgt agccgttgtc ctccttggtg cggtgggaga
    17401 cgacctggca attgcccagc cgcagcaccg tcaccggcac gtgctcgccg ctctcggtga
    17461 aaagccgcat catcccgatc ttctgtgcga tcaccccgga acgcattgca aatccccttc
    17521 gcgcctcaga gcttgatctc gacgtcgacg ccggcggcga gatcgagctt catcagcgca
    17581 tcgaccgttt gcggcgttgg atcgacgatg tcgagcagcc gcttatgcgt gcgcatttcg
    17641 aactgctcgc ggctcttctt gtcgatgtgc ggcgagcggt tgacggtgaa tttctcgatc
    17701 cgcgtcggca gcggaatcgg cccgcgcacc tgtgcgccgg tgcgcttggc ggtattgacg
    17761 atctcccgcg tcgaggcatc gaggatacga tgatcgaacg ccttgagccg gatgcgtatg
    17821 ttctggccgt tcatggtgcc tcggatgacg gacgacagac gccggacgac agatgatcta
    17881 tcgccgtcga agtcgtcgct tcattatccg tcctctgttc tgtgtcgtcc gtcactgcta
    17941 ctcaacgatg ctcgcgacca cgccggcgcc gaccgtgcgc ccgccctcgc ggatggcgaa
    18001 gcgcagcttc tcctccatcg cgatcggaac gatcagcgtc acttccatgg cgatgttgtc
    18061 gcccggcatc accatctcgg tgccttccgg cagcgtcacc acgccggtca cgtcggtggt
    18121 gcggaagtag aactgcggac gatagttggt gaagaacggg gtgtggcgtc cgccctcctc
    18181 cttggtgagg atgtaggcct cggccttgaa cttggtgtgc ggcttcaccg agccgggctt
    18241 gcacagcacc tggccgcgct ccacctcctc gcgcttggtg ccgcgcagca ggcagccgac
    18301 gttgtcgccg gcttcgccct gatcgagcag cttgcgaaac atctcgacgc cggtgactac
    18361 cgtcttctgc gtcgggcgga tgccgacgat ctcgacttcc tcgccgacct tgatgacgcc
    18421 gcgctcgatg cggccggtgc agaccgtgcc gcggccggag atcgagaata cgtcttcgac
    18481 cggcatcagg aacggctggt ccttcggacg ctcgggttgc gggatgtatt cgtcgacggc
    18541 cttcatcagc gccccaatcg aagtcttgcc cagctcctcg ttgttgcctt cgagcgccat
    18601 cagcgccgag cccttgacca ccggaatctt gtcgccgggg aaattgtatt tggagagaag
    18661 ctcgcgcact tcgagctcga ccagctcgag caactcggga tcgtcgacca tgtcgacctt
    18721 gttgagatag acgacgagcg ccggcacgcc gacctggcgg gcgagcagga tgtgctcgcg
    18781 ggtctgcggc atcgggccgt cggcggcgct aaccaccagg atggcgccat ccatctgcgc
    18841 ggcgccggtg atcatgttct tcacgtagtc ggcatggccg gggcagtcga cgtgggcgta
    18901 atggcgcttg tcggtctcgt actcgacgtg ggcggtcgcg atggtgatgc cgcgggcctt
    18961 ctcctccggc gccttgtcga tctgatcgta ggcggtgaat ttcgcctggc ccttttccgc
    19021 caggaccttg gtgatcgccg cggtcaacgt cgtcttgcca tgatcgacat ggccaatcgt
    19081 tccgatgttg caatgcggct tggtgcgctg gaatttttcc ttggccatcg ttcggctcct
    19141 cggctgttag tcaaaatctg gcattgcggt cggggtcctc atgcggcacc ggctcaggcg
    19201 tacttggcct gaacctcggc ggcgaccgcc tggggcactt gctcatagtg gtcgaactgc
    19261 atcgtgaagg tggcgcggcc ctggctcatg gagcgcaggt tgttgacgta ggagaacatg
    19321 ttggcgagcg gcaccatagc ggtgatgacg ttggcgttgc cgcgcatgtc ctggccctgg
    19381 atctgcccgc ggcgcgaatt gaggtcgccg atcacagatc ccgtgtactc ctcgggggtg
    19441 accgcctcga ccttcatgat cggctcgagc agcaccgggg cgcccttctg cagcgcctcg
    19501 cgcatcgcgg agcgggcgca gatctcgaag gccattgccg aggaatcgac gtcgtgcgag
    19561 gcgccgtcga cgaggctcac cttgacgtcg actaccggga agccggcgag cacgccggcg
    19621 ccgagcatcg cttcgaggcc cttctccacc gccgggacga actccttcgg caccgccccg
    19681 ccgaccacgt cgttctcgaa ctcgaaaccg acgccgggcg tggtcggctc ggcgatgatc
    19741 ttgatgcgcg cgaactggcc gtggccgccg gtctgcttct tgtgcgtgtg gtcgaccgtg
    19801 gccggccggg tgatcttctc gcggtaggca acctgcgg
//
LOCUS       DATMQB010000004         4862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4031890, whole genome shotgun sequence.
ACCESSION   DATMQB010000004 DATMQB010000000
VERSION     DATMQB010000004.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4862
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4031890"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..391)
                     /locus_tag="VNY79_00250"
     CDS             complement(<1..391)
                     /locus_tag="VNY79_00250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031966 - mitochondrial membrane
                     [Evidence IEA];
                     GO_process: GO:0033617 - mitochondrial cytochrome c
                     oxidase assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HWX70905.1"
                     /translation="MVFGAILFVTSHPSSTGPALAAVGGPFHLVDQDGKAVSDEAMKG
                     RPFLVFFGFTHCPDVCPTTLFDMSQMLRALGPDAGRIGVLFITVDPERDTPAVLKDYL
                     SNFDPHLRGLTGDPAAVNAALKAFRVYA"
     gene            complement(836..1270)
                     /locus_tag="VNY79_00255"
     CDS             complement(836..1270)
                     /locus_tag="VNY79_00255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX70906.1"
                     /translation="MKWLAAVVGALASALVITTAFADIRVVNDPGGEVTSYLRKYNAM
                     RTSGERLVIDGPCLSACTLFTGLLPHDHVCVTKRAVLGFHAASYYDDARRSLVPTRTG
                     TRLVMRLYPQEIRDWIGRHGGLTPHIIALRGHELHAMYDSCR"
     gene            1623..3365
                     /locus_tag="VNY79_00260"
     CDS             1623..3365
                     /locus_tag="VNY79_00260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-requiring protein"
                     /protein_id="HWX70907.1"
                     /translation="MDTRPARNTNVAEFPTAYYLLEGLNEIGIDYLFCNLGTDHAPII
                     EEMAHRAKRGEPAPKVVRCPHENTAAHMAAGYALVTGRGQGVLVHVDVGTANTATAMH
                     NMFRSRLPVLLMAGKAPYTSHNELVGTRDTHVHWVQEPFDQASLVRPYLKWEWTLPSG
                     VVVKEVLRRAHSIMQSEPRGPVYLMMQRETLTQPWALDEIRRYSAERFGAMTSGGADP
                     KLVAALAERLIAAENPILITGYGGRNARAAQMIAEVAEFAGIAVFEGSTWSNIGHLSP
                     CFAGFAPDKALPEADVGMLVDVDVPWFPADAQPSEQSFWAHIDVDVLKAGSPMWTFPG
                     DLRLQGDSGRILEQLLAELRAKATPRFAAAAAQRLERLKAARAERLARAAALAADKGQ
                     PDAINPHYLMAELAKVLDDEDIIFNEAVRNTPAVLMQIPRRLPNTTVATGGAGLGWSG
                     GMALGAKLAAPDRLMVQVTGDGGFYFGGPCSVFATAQQYGLPIFSIVLDNSGWAAVKA
                     ATLRVYPDGEATTAGAFHAELAPVEFSKIGEAFGAHAEKVSDPAGVPDALARCAAEVR
                     RGRSALLHARVTRL"
     gene            complement(3370..>4862)
                     /locus_tag="VNY79_00265"
     CDS             complement(3370..>4862)
                     /locus_tag="VNY79_00265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="sodium:solute symporter"
                     /protein_id="HWX70908.1"
                     /translation="TWLGFAAAQWRKGDLDLLHEWGLGGRRFGTVITWFLIGGDLYTA
                     YTFIAVPALAFGAGAIAFFAVPYTIVMYPILFLVFPRLWHVCHKHHYITAADFVRGRF
                     GNRWLALAVTIAGIVATMPYIALQLVGLQVVIGGLGVGGTGYAGDLPLVIAFIILAAF
                     TYSSGLRAPASIAIVKDILIYITAAAAIIVVPLQLGGFGKIFAAVPPQKLLLAAPGAN
                     TTGAYGIYATLALGSALALFLYPHSLTGILSASSGHAIRRNAAMLPGYSLMLGLLALV
                     GFFAIAAGVANLPDYTDGFKQFGNNFAVPALFLHSFPAWFVGIAFAAIGIGALVPAAI
                     MSIAAANLYTRNIHREFINKNPTDKQEAQMAKWVSLVVKFGALIFIIFVPSQYAIYLQ
                     LLGGILIIQTLPAVMLGVYTRWFNDWALLVGWAIGTAAGAWMFVAANLTPNYPLAFAG
                     YTFPGYTAFYTVILNLAIAVVLSPLFNAMSARSVPLDNTVAADYHA"
BASE COUNT          878 a         1557 c         1714 g          713 t
ORIGIN      
        1 tggcatagac gcgaaatgcc ttgagggcgg cgttcaccgc ggcggggtcg ccggtcaggc
       61 cgcgcaggtg cgggtcgaaa ttcgacagat agtccttgag caccgcgggc gtgtcgcgct
      121 ccggatcgac ggtaatgaac aacacgccga tacggccggc gtcgggcccg agggcgcgca
      181 gcatctgcga catgtcgaac agcgtcgtcg gacaaacgtc cgggcaatgg gtgaagccga
      241 agaacaccag gaacggacgg cctttcatgg cctcatcgct gaccgccttg ccgtcctggt
      301 cgacgagatg aaacgggccg ccgacggcgg cgagcgccgg cccggtcgac gacggatggc
      361 tggtcacgaa caggatggcg ccgaagacca gcacgaggcc gcagagaaac gccccgagca
      421 ccgacacggc gcgaagagat cgttctggca ggttcaagag gggactccgt cagccgaagc
      481 acgcggcaag acccgcccgg atcgtttcga agaacaccgt ggcgccgtaa tgtggcccag
      541 agcagcaccg tgcccgcgag cgccacgatg gcgccggcgc cggcgatgaa tatcggccgc
      601 catgtcaggc ttggtgcgac agtctcgcgc atcgatcgcc tttatctccc ttgccgcctg
      661 tgagtcggcg agggagcgca cccggtaaat aagccgggac ggcgcaggcg acaaccgtgc
      721 aggtggtgcg cggggaccgg cgaaagcgag cgcagccgct tcaaagctga gcagctgcgc
      781 tgggcagaaa ctgagtcctt tgcggacggc cagttttacc ttaacggctc gcgcgctaac
      841 ggcaggaatc gtacatcgcg tgcagctcgt ggccgcggag cgcgatgatg tgcggcgtga
      901 ggccgccgtg ccgcccgatc cagtcgcgga tctcctgggg atagagacgc atcaccagcc
      961 gcgtgccggt ccgcgtcggc accagcgacc gcctcgcgtc gtcgtagtag gacgccgcgt
     1021 gaaagccgag caccgcgcgc ttggtcacac agacgtggtc gtgcgggagc aggccggtga
     1081 acaaggtgca ggccgacagg cacgggccgt cgatgacaag ccgctcacct gaggtgcgca
     1141 tcgcgttgta cttgcgcagg taggatgtga cttcgccccc cgggtcattg acgacgcgaa
     1201 tgtccgcgaa agccgtagta ataacgaggg ccgacgcaag cgcgccgacc acggcagcta
     1261 gccatttcat gatccctcac cctttcccct tcggaggact aacgattcct tgctattgtg
     1321 gcgagagttc gaacgtgccg ccctatccgc agcaatttcg acacgaactt cggatcggag
     1381 gccgtatcgc gcgtcaaggt taccggccgg cggcgcgagg gtgagtgaaa gttccacggc
     1441 tggagccgcg gcggtttgcc ggccatccgg cggttccgat gcaggcgacc gttagggccc
     1501 gcgcgacgcg gcgagcccca atccactccg agcgtcatcg cggtgcgccc ggcgcggaac
     1561 gtccggcgtc atctgacggt gctatactct gcaagacttc aaccgaaagc gattgctcga
     1621 tcatggacac gcggcctgcc cgaaacacca acgttgccga gttcccgacc gcctattacc
     1681 tgctcgaagg gctcaacgag atcggcatcg actatctgtt ctgcaacctg ggcaccgatc
     1741 atgcgccgat catcgaggag atggcgcacc gcgccaagcg cggcgaaccg gcgccgaaag
     1801 tggtgcgttg cccgcacgag aacaccgccg cgcacatggc cgcgggctat gcgctggtca
     1861 ccggccgcgg ccagggcgtg ctggtgcacg tcgatgtcgg caccgccaat accgcgacgg
     1921 caatgcacaa catgttccgc agccgcctgc cggtgctgct gatggccggc aaggcgccct
     1981 acacctccca caacgagctc gtcggtacgc gcgacaccca tgtgcactgg gtgcaggagc
     2041 cgttcgacca ggcgagcctg gtgcggccgt atctgaaatg ggaatggacg cttccgtccg
     2101 gcgtcgtggt caaggaggtg ctgcggcgcg cgcattcgat catgcagagc gagccgcgcg
     2161 gcccggtcta tctgatgatg cagcgggaga cgctgacgca gccgtgggcg ctcgacgaaa
     2221 tccgccgcta ttccgccgag cggttcggcg cgatgacgag cggcggcgcc gacccgaaac
     2281 tcgtcgccgc gctcgcggag cggctgatcg cggcggaaaa tcccattctc atcaccggct
     2341 atggtggccg caacgcgcgc gccgcgcaga tgatcgcgga ggtcgcggag ttcgccggca
     2401 tcgccgtgtt tgaaggcagc acctggagca atatcggcca cttgagcccg tgcttcgccg
     2461 gctttgcgcc cgacaaggcg ctgccggagg ccgacgtcgg gatgctcgtc gatgtcgacg
     2521 tgccgtggtt ccccgccgat gcgcagccga gcgagcaatc gttctgggcc catatcgacg
     2581 tcgacgtgct caaggccggc tcgccgatgt ggaccttccc cggcgacttg cggctccagg
     2641 gcgacagtgg ccgcatcctc gaacagctcc tggccgagct tcgggcgaaa gcgacgccgc
     2701 gctttgccgc ggccgcagcg cagcgcctcg agcgcctcaa ggcggcgcgc gcggagcgcc
     2761 ttgcccgcgc cgccgcgctc gcggcggaca agggccagcc cgacgccatc aatccgcatt
     2821 atctgatggc ggagctcgcc aaggtgctcg acgacgagga catcatcttc aatgaggcgg
     2881 tgcgcaacac gccggcggtg ctgatgcaga ttccgcgccg gctgccgaac acgacggtgg
     2941 cgaccggcgg cgccggcctc ggctggtccg gcggcatggc gctcggcgcc aagctcgcgg
     3001 cgccggaccg gctcatggta caggtgaccg gcgacggcgg cttctatttc ggcgggccgt
     3061 gctcggtgtt cgcgaccgcg cagcagtacg ggctgccgat tttttccatc gtgctcgaca
     3121 attccggctg ggcggcggtc aaggcggcga ccttgcgcgt ctatccggac ggagaagcga
     3181 ccaccgccgg cgccttccac gccgagctcg cgccggtcga gttcagcaag atcggcgaag
     3241 cgttcggcgc ccatgccgag aaggtcagcg atcccgccgg cgtgcccgac gcgctcgcgc
     3301 gttgcgcggc cgaggtgcgc cgcggccgtt cggcactgct gcacgcgcgc gtcacgcggc
     3361 tctgatgcct caggcgtggt agtcggccgc gaccgtatta tcgagcggga ccgagcgcgc
     3421 gctcatggcg ttgaacagcg gcgagagcac gaccgcgatc gcgaggttca ggatcacggt
     3481 gtagaacgcc gtgtagccgg ggaaggtgta gccggcgaac gccagcgggt agttcggcgt
     3541 aaggttggcg gcgacgaaca tccaggcgcc ggcggcggtt ccgatcgccc agccgacgag
     3601 cagcgcccaa tcgttgaacc agcgggtata gacgccgagc atcaccgccg gcagcgtctg
     3661 gatgatcagg atgccgccaa ggagctgcag gtagatggcg tattgcgacg gcacgaagat
     3721 gatgaagatc agcgcgccga acttgaccac cagcgacacc cacttcgcca tctgcgcttc
     3781 ctgcttgtcg gtcggattct tgttgatgaa ctcgcggtgg atgttgcggg tgtagagatt
     3841 ggcggcggca atcgacatga tcgccgccgg caccagcgcg ccgatgccga tcgcggcgaa
     3901 ggcgatgccg acgaaccagg ccggaaagct gtgcaggaac agcgccggca cggcgaaatt
     3961 gttgccgaat tgtttgaagc cgtcggtgta gtcggggagg ttggcgacgc cggcagcgat
     4021 ggcgaagaaa ccgaccagcg ccaggagccc gagcatgagc gaatagcccg gcagcatcgc
     4081 cgcgttgcgg cggatggcat gcccgctgct cgcgctcaga atgccggtga gcgagtgcgg
     4141 atagaggaag agcgccagcg ccgagccgag cgcgagcgtg gcgtagatgc cgtaggcgcc
     4201 cgtggtgttg gcccccggcg ccgccagcag gagcttctgc ggcggcacag cagcaaagat
     4261 cttgccgaag ccgcccagct gcagcggcac gacgatgatg gcggcggccg cggtgatgta
     4321 gatcagaatg tccttgacga tggcgatcga ggccggcgcg cgcagcccgc tcgaataggt
     4381 gaaggccgcg aggatgatga aggcgatgac cagcggcagg tcgccggcgt agccggtgcc
     4441 gccgacgccg agcccgccga tgaccacctg cagcccgacc agctgcaggg cgatgtaggg
     4501 catggtcgcc acaatgccgg cgatcgtcac ggcgagcgcc agccagcggt tgccgaagcg
     4561 gccgcgcacg aaatcggcgg cggtgatgta gtggtgcttg tggcacacgt gccagagccg
     4621 cgggaacacc aggaacagga tcgggtacat cacgatcgtg tacggcacgg cgaagaaggc
     4681 gatggcgccg gcgccgaagg cgagcgccgg aacggcgatg aaggtgtagg cggtatagag
     4741 gtcgccgccg atcagaaacc aggtgatgac cgtgccgaag cgccggccgc ccaggcccca
     4801 ttcgtgcagc aggtcgaggt cgcccttgcg ccattgggcg gcggcgaagc cgagccaggt
     4861 ga
//
LOCUS       DATMQB010000005        13298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2791791, whole genome shotgun sequence.
ACCESSION   DATMQB010000005 DATMQB010000000
VERSION     DATMQB010000005.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 13298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13298
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2791791"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..312
                     /locus_tag="VNY79_00270"
     CDS             <1..312
                     /locus_tag="VNY79_00270"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HWX70909.1"
                     /translation="ALTEKWGQLGHEVGFGIGIAHGYATLGTIGFEGRFDYAAIGTVS
                     NVASRLCDEAKPGQILISPRVLMAVKDAVIVDAVGEFELKGIRRPMVAHNVLAATPPK
                     I"
     gene            548..1666
                     /locus_tag="VNY79_00275"
     CDS             548..1666
                     /locus_tag="VNY79_00275"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX70910.1"
                     /translation="MTLNLNKPGQNPRGAAMSLLHEVCYPLCLEAPEATHDAPPRLSD
                     GVFEYEAPRFHHAGRRRSDVASVWSGAADHPGRRVRLFGTASSTAAPYVTAFKLGLEA
                     VGFIEGQNVAVEYHLPGGHDEGLPALMAELVQRRVAVIVGDTSPAIAAKTATSTIPIV
                     FVTGTDPVSVGLVASFNHPGGNATGVTFLTATLDAKRLELLHELLPQAKVIASLLDPN
                     YPASASQLKGLHDAAAALGQQIHDFQVSNESQLDHAFAAIANLRPDALVVSASAFLGT
                     RRQQIIELAARNSLPAMYFNPEFPVFGGLISYGASVPDAFRQAGAYTGRILKGQKPAE
                     MPVLQPTKFELVINLKTAKALGLDVPPSLLALVDEVIE"
     gene            complement(1847..2224)
                     /locus_tag="VNY79_00280"
     CDS             complement(1847..2224)
                     /locus_tag="VNY79_00280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HWX70911.1"
                     /translation="MFTHVMVGANDLAASKKFYDAVLGAIGLPAGQADPKGRIFYRTK
                     TGVLGITKPIDGEPATHANGGTIGFACASPEQARAFHDAGVANGGKSIEDPPGWREGA
                     TGKFYLAYLRDPSGNKICALHRG"
     gene            complement(2662..3249)
                     /locus_tag="VNY79_00285"
     CDS             complement(2662..3249)
                     /locus_tag="VNY79_00285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013949352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HWX70912.1"
                     /translation="MRAKGIYIQLAALLAYLVASLAAAYAQTIEEKAQLCSACHGENG
                     VPPAQQFPVPVIWGQNLGYLFFQLRDFKSGARKNDQMTPIAQSLEQSDLMPLAQYFSK
                     KPWPNLQQPRPSADVLTRAQRANNSVVCTSCHQEGFKGEGTQPRLAGQLHAYLERTML
                     DFRSGARGNNPGMSDLMKAITEEDIAALAAYLAAL"
     gene            complement(3433..5166)
                     /locus_tag="VNY79_00290"
     CDS             complement(3433..5166)
                     /locus_tag="VNY79_00290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013949353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HWX70913.1"
                     /translation="MSQIGRTSLAVGAMALSLAATGVARAQETSGGAGGMAGTAPAAN
                     VTQAMLNNAAGDSKNFLATNGNYAQTRFHPADQITTANIKKLKVAWIFQTDIRESMET
                     SPIIVNGVMYVTTSFDHLYALNAQTGEQLWHYKHEMGPITVYCCGPNNRGAAVYGDKV
                     YLATLDAKLDAIDAKTGKMVWSQQIADPSLGYSETMAPTAVDGKILIGTNGGEYGIRG
                     FVKAYDANDGKLLWTFDTIPENSVGVWATKDATGRDMHRDIAAEKDQLAKAGDPYKTL
                     GGGVWQNPSVDLASKRIYFVVGNPSPDLDGGLRPGDNLYTDSLVSVDLDTGKMACYFQ
                     YIAHDVWDLDATSPTVLVNVQDKNGKTVPGVLHAGKTGNIYVHDRKDCSLIRFTDAMV
                     SQKGMWTLPTATAALDPSAARMFPGANGGVEWSPIATNPGLNLAYAINLEQEMTYTVA
                     SSPYPNGKLWLGGAFTNVPGGVQAGNVTAVDYNTGKVKWQVKTPQPMIGGLLATAGGL
                     VFTGEANGWFKAYDAKSGSILWKFHAGAGVNAPPSSYTAGGKQYIVVAAGGNVQIDAK
                     RGNSIIAFTLE"
     gene            5327..5764
                     /locus_tag="VNY79_00295"
     CDS             5327..5764
                     /locus_tag="VNY79_00295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HWX70914.1"
                     /translation="MVKFSGTPLDRTFAALADPTRRALLTRLAEQPDLSVSALAAPFA
                     VSLPAIMKHLDVLSDAGLVARNKSGRTVICRLTPAPMQAAVDWLNRYERFWSESLRRL
                     ATFLEEEESWPSNPQSSNQASPSSAGSKRRPEKSSPPGPTRKR"
     gene            5659..6102
                     /locus_tag="VNY79_00300"
     CDS             5659..6102
                     /locus_tag="VNY79_00300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC domain-containing protein"
                     /protein_id="HWX70915.1"
                     /translation="MAVESAILQPSLTLKRRLKAPPGKVFAAWTDPEKMKRWMGPGEV
                     KSIRTESDTRVGGRYRIVMQAPNGEEYDVGGVYREVVADEKLVFTWAWKSAPERESLV
                     TLVLKPDGDGTLLTLTHEQFADEDSRNGHERGWNSSLDKLEKFVA"
     gene            6229..6612
                     /locus_tag="VNY79_00305"
     CDS             6229..6612
                     /locus_tag="VNY79_00305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HWX70916.1"
                     /translation="MASSHGKFHWNELMTRNVERAKKFYSDTLGWTFDSMPMPGGGTY
                     WLAKIGDEPAAGMFDIGGPEYKDTPESWMPYIAVDDVDARVKKATKAGATVMKPAFDV
                     PGVGRIVILLEPGGAGVGWMTPADA"
     gene            6631..7389
                     /locus_tag="VNY79_00310"
     CDS             6631..7389
                     /locus_tag="VNY79_00310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018241189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HWX70917.1"
                     /translation="MQPHKIVSHDEWLAARKAHLADEKAFTRARDALSRKRRELPWEK
                     VDKNYVFDTPDGKKTLADLFGGKSQLIVYHFMLGPDWEQGCPSCSLLADHFDGAVIHL
                     AQRDVAFVVVSRAPLDQIEKFERRMGWHFKWVSSFANDFNYDYHVSATPEEKASGKAL
                     YNYQLTEFPSEERPGASVFYKNATGEIFHTYSSYGRGLDILIGAYNFLDIAPKGRDEE
                     SLEWSMAWVRHHDRYDGAAVDPKAKYVEPKSSDS"
     gene            7515..7907
                     /locus_tag="VNY79_00315"
     CDS             7515..7907
                     /locus_tag="VNY79_00315"
                     /inference="COORDINATES: protein motif:HMM:NF013304.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HWX70918.1"
                     /translation="MSIELKYLALTAMLTASLWIPYIVAQATTNGFLRPENYVDPTPR
                     KVPLWGQRADRVYLNAVETFAPFAALVILIQLTGKADAMTAFWAACFFWLRVAHAVVY
                     LAAIPYIRTIVFVLGYVAVIGLFVELMK"
     gene            complement(7912..8838)
                     /locus_tag="VNY79_00320"
     CDS             complement(7912..8838)
                     /locus_tag="VNY79_00320"
                     /EC_number="1.1.1.157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0070403 - NAD+ binding [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyryl-CoA dehydrogenase"
                     /protein_id="HWX70919.1"
                     /translation="MVEVKERPKTRGEHAAANTIRKVGIIGAGQMGSGIAHVCALSGF
                     DVLLNDVAADRISAGLATISGNLARQVSRQRITDEQRQAAIKRIGAAPTLGDLSDCDL
                     VIEAATEKEDTKRKIYGALCPTLKRDAIVGTSTSSISITRLASATDRPERFIGIHFMN
                     PAPLMELVEVIRGIATDDVTFETTKQFIAKLGKTIAVSEDFPAFIVNRVLLPMINEAI
                     YTLYEGVGNVEAIDTAMRLGAHHPMGPLELADFIGLDTCLSVMQVLHEGLADSKYRPC
                     PLLVKYVEAGWLGRKTQRGFYDYRGEKPVPTR"
     gene            complement(8883..9827)
                     /locus_tag="VNY79_00325"
     CDS             complement(8883..9827)
                     /locus_tag="VNY79_00325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HWX70920.1"
                     /translation="MPTLLLAEHDNKSLKDATNKALTAAKALGGDVHILVAGEGCKAV
                     ADAAAKLDGVKKVLLADAPAYAHMLAEPTAALIVSLAEPYETIMAAATTTGKNVMPRV
                     AALLDVMQISDVTKVVAPDTFERPVYAGNAIQTVRSTERKKVMTVRTAAFQATGEGGS
                     APVEAVAAAADPGISGFVGEELSKSERPELTSAKIIISGGRAMQSRENFTKYIEPVAD
                     KLGAAVGASRAAVDAGYAPNDWQVGQTGKVVAPGLYIAVGISGAIQHLAGMKDSKVIV
                     AINKDEEAPIFQVADYGLVADLYQALPELAKELEKLGR"
     gene            complement(9967..10716)
                     /locus_tag="VNY79_00330"
     CDS             complement(9967..10716)
                     /locus_tag="VNY79_00330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="electron transfer flavoprotein subunit beta/FixA
                     family protein"
                     /protein_id="HWX70921.1"
                     /translation="MKILVPVKRAVDKDVKIRVKADGTGVELGNVKMSMNPFDEIAVE
                     EALRLREAGKATEIVAVSIGPAQASETIRTALAMGADRGILVKAEGTVEPLAVAKILK
                     AIAAAEQPGLIIMGKQVIDDDCNQTGQMLAALLGWPQGTFASKVTLDGEAIMVTREVD
                     GGLQTVKLKMPAIVTTDLRLNEPRYASLPNIMKAKKKPIDEKTAADYGVDVKPRLEIV
                     KTTEPPQRKAGVKVKTVAELVDKLKNEAGAI"
     gene            complement(10822..11610)
                     /locus_tag="VNY79_00335"
     CDS             complement(10822..11610)
                     /locus_tag="VNY79_00335"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007602934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX70922.1"
                     /translation="MGRLDNKVAIVTGAASGIGRASAILFAREGARVVIVDQNADGLA
                     ETAKLIAKDGGSTQAMTADTGREDDVKAFVGRALDSFGALDAIYANAGVSGGLVPLFE
                     QTVEQWQQILQTNLIGPFLAIKHAGAHMVKEGRGSIVLTASVAGLRANAGGLPYSASK
                     AGVVSLAQTAANAFLGTGVRVNAICPGLIETGMTQPIFERARERGTQGKIGQLNPLQR
                     AGGPQEIAAMALFLASDESSYVNGQAFPVDGGLTSTLPFTKPIR"
     gene            complement(11646..12224)
                     /locus_tag="VNY79_00340"
     CDS             complement(11646..12224)
                     /locus_tag="VNY79_00340"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008817 - corrinoid adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HWX70923.1"
                     /translation="MVVLNKIYTRTGDDGTTALGTGERRKKYDLRIAAYGTLDETNSV
                     IGIARLHTAEDAALDAALSRIQNDLFDVGADLTTPGKGKGPGGARLTVTAAQVDWLEA
                     EIDRLNDELEPLRSFILPGGGAAAAHLHLARTVCRRAERLIAELNDKPDESVTPEVLK
                     YVNRLSDFLFVAARHANGKGARNVLWKPGQNR"
     gene            complement(12242..12436)
                     /locus_tag="VNY79_00345"
     CDS             complement(12242..12436)
                     /locus_tag="VNY79_00345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="twin transmembrane helix small protein"
                     /protein_id="HWX70924.1"
                     /translation="MATFLSHWLVPIAIGAVAVVLLLGLVNMMRGGSGNTSQKLMRLR
                     VLLQFIAIVVIMFTIWFMAR"
     gene            complement(13076..>13298)
                     /locus_tag="VNY79_00350"
     CDS             complement(13076..>13298)
                     /locus_tag="VNY79_00350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX70925.1"
                     /translation="RRCDLEAGMAKLLAARVAWAAADNAVQIHGGNGFALEFPVSRLL
                     CDARILSIFEGAAEIQANVIARRLLDGSN"
BASE COUNT         2226 a         4258 c         4297 g         2517 t
ORIGIN      
        1 gccttgactg agaagtgggg tcagttaggg cacgaggttg gctttggtat cggcattgcg
       61 catggatatg cgactctggg cacgattggt tttgaaggac gcttcgacta tgcggctatt
      121 gggaccgtat ccaacgttgc atcccgcctt tgcgacgaag cgaaacctgg ccagattcta
      181 ataagtccga gagtcctgat ggcagtcaaa gatgccgtca tagttgacgc cgttggggag
      241 ttcgaactta agggcatccg gcgtcctatg gtggcccaca acgtgctcgc cgccacgccg
      301 ccgaaaatct gaattgagcg gctggcggac aagccaaatt gctgcactgc tgatcggctc
      361 ttgttggccc taaactgacg tgcctatcgt gttggcgcat gtctgctttg agggggaaga
      421 gcggaagtgg cgcggactcg ctgccatgtc gctgaatggc cccaaactga catgccaatc
      481 gcgttagcgc atgtctgctt tgagggggaa gagcggaagt ggggcggact tgctgccatg
      541 tcgctgaatg accctgaact tgaataagcc gggccaaaat ccccgcggcg cagcaatgtc
      601 cttgctgcac gaggtgtgct atccgttgtg tttagaagcg cccgaggcaa cccacgacgc
      661 tccgcctcga ctttcagatg gggtgttcga atatgaagcg ccgcgatttc atcacgctgg
      721 tcggcggcgc agtgacgtgg ccagtgtctg gtcgggcgca gcagaccatc ccggtcgtcg
      781 cgttcgtctt ttcggcacag catccagcac agcggccccc tatgtaacgg cgttcaaact
      841 gggcttggag gcggttggct ttatcgaggg gcagaatgtg gcggttgaat accacttgcc
      901 cggcggccat gacgaagggc tgccagcttt gatggctgaa ctcgtacaac ggcgggtggc
      961 cgtcatagtc ggagatactt ccccagcgat tgcggcaaaa acggcaacct cgacgattcc
     1021 aattgtgttc gtgacgggca ccgacccagt tagcgtcggc cttgtggcca gcttcaacca
     1081 tcccggcggc aatgcaacgg gcgtgacctt cttgaccgct acattggacg caaagcgact
     1141 cgagctgctc catgagctgc ttccgcaagc gaaggtgatt gcctctttgt tggacccaaa
     1201 ctacccagcc agtgcgagcc agctgaaggg cctccatgat gccgcagccg cgctcggcca
     1261 acagattcat gatttccaag tcagcaatga aagtcagctt gaccacgcct ttgccgccat
     1321 tgcgaatttg cgccccgatg cgctcgtggt ttctgcctcc gcattcttag gcacccgccg
     1381 gcaacagatc atcgaactag ctgcacgcaa ttctctgccc gccatgtact tcaatcccga
     1441 atttcccgtg ttcggcggcc tcatcagcta cggggccagc gtaccggacg cgtttcgcca
     1501 agccggcgcc tataccggcc gcatcctgaa gggccagaag ccggctgaaa tgccagtgct
     1561 tcaacccacc aagttcgaat tggtcatcaa tctcaagacc gccaaggcac tcggcctcga
     1621 cgtgccgccg tcgctcctcg cgctcgtcga cgaggtgatt gagtaagtga gttgatgtcg
     1681 cctactggcc cccgtcgcgc cgcttaccgc gatacggcga ttcagttgct atcgggatga
     1741 aaaacggaca tcgcgcagac atcctgaagt gtcgcgtttg acccaaaccg cacccgagat
     1801 tgattgtcgg cccggcgatg agaggcgccc ttcgcgagcc tcgcattcag ccgcgatgca
     1861 gcgcgcaaat cttgttgcct gatggatccc gaaggtaggc aagatagaac ttgcctgtgg
     1921 cgccttcgcg ccagccgggc gggtcctcga tgctcttgcc gccattggct acgccggcgt
     1981 cgtggaacgc ccgcgcctgc tcagggctgg cacacgcgaa accgatggta ccgccattgg
     2041 cgtgcgtcgc cggctcgccg tcgataggct tggtgatgcc gagcacgccg gtcttcgtgc
     2101 gataaaagat gcggcccttc ggatccgctt ggcccgccgg cagcccgatg gcgcctagca
     2161 cggcgtcgta gaacttcttg gaggcggcaa gatcattggc gccgaccatt acgtgcgtga
     2221 acatgcgttg ctgtccttgt cagagtacga tccggacttc gcctggacct cggctaccct
     2281 tgcgaagtgt gcttcacctt aagatcatga cgccgagaag gaccgggcag agcgtgctgc
     2341 aactgcgctt ccggacattc atagtcccga ggggccgtct ggcaagcccc caacagttcc
     2401 gttgatggca gctacggcca ttggcactaa gcggacattt caagatgccc gctgcatgtt
     2461 cgctttcggg agcaaacgcg actccctggc gcgccatgac aacactcgcg tgccatcgcc
     2521 ccgttcgctc ggctgccatc cccagaagag gtgttcgagt ttgccggagt ctgctggcca
     2581 gaaactcgta gccgcttcgc aacgaccgcc gcgcgaccca agccacgcag cgtccctgcc
     2641 gcatccccgc ttcagggcgg cttacagcgc cgcgagatac gcggcgaggg ccgcgatgtc
     2701 ctcctcggtg atcgccttca tcaggtccga catgccggga ttgttgccgc gggcgccgct
     2761 gcggaaatcg agcatcgtcc tttccaggta cgcgtggagc tgcccggcaa gacgcggctg
     2821 tgtgccctcg cccttgaatc cctcctgatg gcagctcgtg cagacgacgg aattgttggc
     2881 gcgctgcgcg cgcgtcagca cgtcggcgga cggcctcggc tgctgcaggt tgggccaggg
     2941 tttcttggag aaatactgcg ccagcggcat caggtcgctt tgctccagac tctgcgcgat
     3001 cggggtcatc tggtcgttct tgcgcgcccc ggacttgaag tcgcggagct gaaagaagag
     3061 atagccgaga ttctggcccc agatcaccgg caccgggaat tgctgcgcag gcggcacgcc
     3121 gttctccccg tggcatgcgg agcacagttg cgctttttcc tcgatggtct gcgcgtaggc
     3181 ggcggcgagc gatgcgacga gatatgcgag cagggcggct aactggatgt aaattccctt
     3241 tgcgcgcatt cgccgatcct tattccggag taccgcaacg cggcgctcca caaacctgct
     3301 cgcgacccgg ctcgcgagcg caaactgccc gccctgcctg acgcggccca agataacaag
     3361 aaaatggacg gggccgtttc cggtcccgtc cttagcttca cgagcgaagt ggcgttccgc
     3421 cgtcccgcgc tgttactcca gcgtgaaggc gatgatggag ttgccgcgct tggcgtcgat
     3481 ctgcacgttg ccgccggcgg cgaccacgat gtactgcttg ccgccggccg tgtaggacga
     3541 cggcggcgcg ttgacgccgg cgccggcgtg gaatttccac aggatgctgc cgctcttggc
     3601 gtcataggcc ttgaaccagc cgttggcttc gccggtgaac accaggccgc cggcggtggc
     3661 gaggaggccg ccgatcatcg gctgcggcgt cttcacctgc cacttgacct tcccggtgtt
     3721 gtagtcgacc gcggtcacgt tgccggcctg gaccccgccg ggaacgttgg tgaacgcgcc
     3781 gccgagccac agcttgccgt tcggataggg cgagctcgcg accgtgtagg tcatctcctg
     3841 ctcgaggttg atcgcatagg ccaggttgag cccgggattg gtggcgatcg gcgaccactc
     3901 gacgccgcca ttggcgcccg ggaacatgcg cgccgcgctg gggtcaagcg ccgcggtcgc
     3961 ggtcggcaac gtccacatcc ctttctgcga caccatcgcg tcggtgaagc ggatcaggct
     4021 gcaatccttg cggtcatgca cgtagatgtt gccggtcttg ccggcgtgga gaacgccggg
     4081 gaccgtcttg ccgttcttgt cctggacgtt gaccaggacg gtcgggctcg tggcgtcgag
     4141 atcccacacg tcgtgggcga tgtactggaa gtagcacgcc atcttgccgg tatcgaggtc
     4201 aaccgaaaca agcgagtcgg tgtagaggtt gtcgccgggg cgcagcccgc cgtcgaggtc
     4261 gggcgaggga ttgccgacca cgaaatagat gcgcttgctg gcgagatcga cggaaggatt
     4321 ctgccacacg ccgccgccca gcgtcttgta gggatcgccg gctttggcga gctgatcctt
     4381 ctccgcggcg atgtcgcggt gcatgtcgcg cccggtcgcg tccttggtcg cccacacgcc
     4441 gaccgagttc tcggggatcg tgtcgaacgt ccacaagagc ttgccgtcgt tggcgtcgta
     4501 ggccttgacg aagccgcgga tgccgtactc gccgccgttg gtgccgatga ggatcttccc
     4561 atcgaccgcg gtcggcgcca tggtctcgct gtagccgagc gacggatcgg cgatctgctg
     4621 cgaccacacc atcttgccgg tcttggcgtc aatcgcgtcg agcttggcgt cgagcgtggc
     4681 gaggtagacc ttgtcgccgt agaccgcggc gccgcggttg ttcggcccgc agcaatagac
     4741 ggtgatcggg cccatctcgt gcttgtagtg ccagagctgc tcgccggtct gcgcgttgag
     4801 cgcgtagagg tggtcgaacg aggtggtcac gtacatcacg ccgttgacga tgatcggcga
     4861 ggtttccatg gactcgcgga tgtcggtctg gaagatccac gccaccttca gcttcttgat
     4921 gttggcggtg gtgatctggt cggccggatg gaaccgggtc tgggcgtagt tgccgttggt
     4981 cgccagaaaa ttcttgctgt cgcctgcggc attgttgagc atcgcctgcg taacgttcgc
     5041 tgccggcgcg gtgccggcca tgccgccggc gccgccgctc gtctcctgcg cccgcgcgac
     5101 acccgtcgcg gccagcgaga gcgccatcgc ccccacggcc agactcgtcc taccgatttg
     5161 gctcatctct tgtcctccct gcgcctgcaa tcgttgatcg actgcgcgcg tttcctcgca
     5221 gttccgtccg aagcgtgaca atggaacctg agactgtcaa ggcaactgac actgcgccct
     5281 ggcgaaacgg cttgacacac gcgcgtctcg ccgtatcctt aacctgatgg ttaagtttag
     5341 tgggacgccc ctcgaccgca cctttgcggc gctcgccgat ccgacgcggc gggcactgtt
     5401 gacgcggctc gccgaacagc cagatctctc ggtcagcgcg ctcgcggcgc cgttcgccgt
     5461 ttcgctgccg gcgatcatga agcatctcga cgtgctgtcc gatgccggac tggtcgcgcg
     5521 caacaagtcg ggccgcacgg taatctgccg gctgacccca gccccgatgc aggcggcggt
     5581 cgactggctc aatcgctacg agcggttctg gtccgagagc ctgcgccgtc ttgccacatt
     5641 ccttgaggag gaagagtcat ggccgtcgaa tccgcaatcc tccaaccaag cctcaccctc
     5701 aagcgccggc tcaaagcgcc gcccggaaaa gtcttcgccg cctggaccga cccggaaaag
     5761 atgaagcgct ggatgggacc cggcgaggtc aagagcatac gcaccgaatc ggacacgcgc
     5821 gtcggcggcc gctaccgcat cgtcatgcag gcgccgaacg gcgaggagta cgacgtcggt
     5881 ggcgtctacc gcgaggtggt ggccgacgag aagctggtct tcacctgggc ctggaaaagc
     5941 gccccggagc gggaatcgct ggtgacgctg gtgctcaagc cggatggcga cggcaccctg
     6001 ctgacgctga cgcacgagca gttcgccgac gaagacagcc gcaacggcca cgagcgaggc
     6061 tggaacagtt cgctcgacaa gctcgaaaaa ttcgtcgcgt gagtgggcgc cgccggcgtt
     6121 gcgcggcggc gcggtcttcg acttcgggaa ttagcaattc cggctgcggc gccgcccccg
     6181 cccggatcga cgagcagaac aggatcaacc atcaacacgg agcaacccat ggcctcgtca
     6241 cacggcaaat ttcactggaa cgagctgatg acccgcaacg tcgagcgggc gaagaaattc
     6301 tattccgaca cgctgggctg gacgttcgac tcgatgccga tgcccggcgg cggcacctac
     6361 tggctcgcca agatcggcga cgagccggcc gccggcatgt tcgacatcgg cggccccgag
     6421 tacaaggaca cgccggaaag ctggatgccc tacatcgccg tcgatgacgt cgacgcgcgc
     6481 gtgaagaagg cgaccaaggc cggcgccacg gtcatgaaac cggccttcga cgtgcccggc
     6541 gtgggccgca tcgtcatcct gctcgagccc ggcggcgccg gcgtcggctg gatgacgccg
     6601 gcggacgcct gatcagatag gagaagcaca atgcagccgc acaagatcgt ctcgcacgat
     6661 gaatggcttg ccgcccgcaa ggcgcatctc gccgacgaaa aagcgtttac gcgcgcgcgc
     6721 gacgcgctca gccgcaaacg gcgcgaactg ccatgggaga aggtcgacaa gaactacgtg
     6781 ttcgacacgc ctgacggcaa gaagacgctt gccgacctgt tcgggggcaa gagccagctg
     6841 atcgtctatc acttcatgct cggcccggac tgggagcagg gctgcccgag ctgctcgctg
     6901 ctcgccgatc acttcgacgg cgcggtgatc catctcgcgc agcgcgatgt cgccttcgtc
     6961 gtcgtctcgc gcgcgccact tgaccagatc gagaagttcg agcggcgcat gggctggcac
     7021 ttcaaatggg tgtcgtcgtt cgccaacgac ttcaactacg actaccacgt gtcggcgacg
     7081 ccggaggaga aggcgtccgg caaggcgctg tacaactacc aactcaccga gttcccgagc
     7141 gaggagcgcc ccggcgccag cgtgttctac aagaacgcga ccggcgagat cttccacacc
     7201 tattcgagct acgggcgcgg cctcgacatc ctgatcggcg cctacaactt cctcgacatc
     7261 gcccccaagg gccgtgacga ggaaagcctg gaatggtcga tggcctgggt ccgtcaccac
     7321 gaccgctacg acggcgcggc tgtcgatccc aaggcgaaat acgtagagcc gaagagttca
     7381 gattcctgat gcgaataggc acggtcagat cgaattgacg catcatccgt aagcgggttg
     7441 cggactagtg ctacgtggac tcaatcgggt gacctgccct ggtgccaggg caggtcgcag
     7501 gggagcaaaa gcaaatgtcg atcgaactca aatatctcgc ccttacggcg atgctgacgg
     7561 cctcgctgtg gataccgtat atcgtcgcgc aggcgacgac caacgggttc ttgcgacctg
     7621 aaaactatgt cgacccgacg ccgcgcaagg tcccgctctg gggccagcgc gcggaccgcg
     7681 tctatctcaa cgcggtcgag acgtttgcgc cctttgcggc gctcgtgatc ctcatacagc
     7741 tgaccggcaa ggccgatgcc atgaccgcct tctgggcggc gtgcttcttc tggcttcgcg
     7801 tcgcgcacgc cgtcgtctat ctggccgcta tcccgtatat ccgcacgatc gtgttcgtgc
     7861 tcggctacgt tgccgtgatt ggcctgttcg tcgagctgat gaagtagccg actatctggt
     7921 cggcaccggc ttctcgccgc ggtagtcgta gaagccgcgc tgcgtcttgc ggccgagcca
     7981 gccggcctcg acgtatttca ccagcagcgg gcacgggcgg tatttcgaat cggcgagccc
     8041 ctcgtgcagc acctgcatga ccgagaggca ggtgtcgagc ccgatgaagt cggcgagctc
     8101 gagcgggccc atcggatggt gggcgccgag ccgcatcgcg gtgtcgatcg cctcgacatt
     8161 gccgacgcct tcatagagcg tgtagatcgc ctcgttgatc atcggcagca gcacgcggtt
     8221 gacgatgaag gcgggaaagt cctccgacac cgcgatggtc ttgccgagct tggcgatgaa
     8281 ctgcttggtg gtctcgaagg ttacatcgtc ggtggcgatg ccgcggatca cctcgaccag
     8341 ctccatcagc ggcgccggat tcatgaagtg gatgccgatg aagcgctccg gccggtcggt
     8401 cgccgaggca agccgcgtga tcgagatcga ggatgtgctg gtgccgacga tggcgtcgcg
     8461 cttgagcgtc gggcagagcg cgccgtagat cttgcgcttg gtgtcctcct tctccgtcgc
     8521 ggcctcgatc acgaggtcac agtcggagag gtcgcccaag gtcggggcgg cgccgatgcg
     8581 cttgatcgcg gcctgccgct gctcgtcggt gatgcgctgg cggctgacct ggcgcgcgag
     8641 gttgccgctg atggtggcca accccgcgga gatgcggtcg gcggcgacgt cgttgagcag
     8701 cacgtcgaag ccggagagcg cgcagacatg ggcgatgccg ctgcccatct gtccggcgcc
     8761 aatgatgccc accttgcgaa tggtattggc cgctgcgtgc tcgccgcgcg tcttcggccg
     8821 ctccttcacc tcgaccatct tcgcctacct tctccgctca tccgcgccgc atgccgtttc
     8881 gctcaacgcc cgagcttttc cagctccttg gccaactccg gcagggcctg atagaggtcc
     8941 gccaccagtc cgtagtcggc gacctgaaag atcggtgctt cctcgtcctt gttgatcgcc
     9001 acgatgacct tcgaatcctt catgccggcg aggtgctgga tagcaccgga gatgccgacg
     9061 gcgatataga ggccgggcgc caccaccttg ccggtctgcc cgacctgcca gtcgttcggc
     9121 gcgtagccgg cgtcgactgc ggcgcgcgag gcgccgaccg cggcgccgag cttgtcggcc
     9181 accggctcta tatatttggt gaagttctcg cggctttgca tggcccggcc gccggaaatg
     9241 atgatcttgg ccgaggtcag ctccggccgc tccgatttcg agagctcctc gccgacgaaa
     9301 ccggagatgc cgggatcggc cgcggcggcg accgcctcga ccggcgccga accgccctcc
     9361 cccgtcgcct ggaacgccgc ggtgcgcacc gtcatcacct tcttgcgctc ggtcgagcgc
     9421 acggtctgga tggcgttgcc ggcatagacc gggcgctcga acgtgtccgg cgccacgacc
     9481 ttggtgacgt cggaaatctg catcacgtcg agcagcgccg ccacgcgcgg catgacattc
     9541 ttcccggtcg tggtcgccgc cgccatgatc gtctcataag gctcggccag cgaaacgatg
     9601 agcgcggcgg tcggctccgc cagcatgtgc gcgtaggcag gcgcgtccgc gagcagcacc
     9661 ttcttgacgc cgtcgagctt ggcggcggcg tcggcgaccg ccttgcagcc ctcgccggcg
     9721 acgaggatgt gcacgtcgcc gccgagcgcc ttggccgcgg tcagcgcctt gttggtcgcg
     9781 tccttgagcg acttgttgtc gtgttcggcg aggaggaggg tcggcatcag aggcctcgtc
     9841 gcgaattcgt catccttcga ggcccgcggg tagcgcgggc ctcgaaggat gcagccgaga
     9901 cgccgccgca gccgcccttc gaggctcgct gcgctcgcac ctcagggtga cggaccaggc
     9961 gcgtcatcag atcgctccgg cctcgttctt gagcttgtcg acgagctcgg cgacggtctt
    10021 gactttgacg ccggccttgc gctgcggcgg ctcggtggtc ttgacgattt cgagccgcgg
    10081 cttgacgtcg acgccgtagt cggcagcggt cttctcgtcg atcggcttct tcttcgcctt
    10141 catgatgttg ggcagcgacg cgtagcgcgg ctcgttgagg cgcagatcgg tggtcacgat
    10201 tgccggcatt ttgagtttca cggtctgcag gccgccgtcg acctcgcgcg tcaccatgat
    10261 cgcctcgccg tcgagcgtca ccttggaagc gaaggtgccc tgcggccagc cgagcagcgc
    10321 cgccagcatc tggccggtct gattgcagtc gtcgtcgatc acctgcttgc ccatgatgat
    10381 caggccgggc tgctcggcgg cggcgatcgc cttgaggatt tttgcgaccg cgagcggttc
    10441 gacggtgccc tcggccttga ccagaatgcc gcggtcggcg cccatggcga gcgcggtgcg
    10501 gatcgtctcc gacgcttgcg ccggcccgat ggagacagcg acgatctcgg tcgccttgcc
    10561 cgcctctctg aggcggagcg cctcctcgac ggcgatctcg tcgaagggat tcatcgacat
    10621 cttgacgttg ccgagctcga cgccggtgcc gtccgccttg acccggattt tcacgtcctt
    10681 gtcgaccgcc cgcttgacgg gcacgaggat cttcatggct tggttcagtt tcttccggct
    10741 gctctcgcgg ctgctctcgg ccgcgccttg gcatccgcgc gatgctgcag cgcgggaacg
    10801 taccggccgt cgggcccggg gtcaacggat cggcttggta aagggaagtg tactcgtgag
    10861 cccgccgtcg accgggaagg cttggccatt gacgtaggac gattcgtcgc tcgccaggaa
    10921 cagcgccatg gcggcgatct cctgcggccc gccggcgcgc tgcagcgggt tgagctggcc
    10981 gatttttccc tgcgtgccgc gctcgcgcgc gcgctcgaag atcggctgcg tcatccccgt
    11041 ctcgatcagt cccgggcaga tcgcgttgac ccgcaccccg gtgccgagga acgcattcgc
    11101 cgccgtctgc gcgaggctca ccacgccggc cttgctggcg ctgtacggca agccgccggc
    11161 attcgcccgc aagccggcga ctgaggcggt gagcacgatc gagccgcggc cttctttgac
    11221 catgtgcgcg ccggcgtgct tgatcgccag gaacgggccg atgaggttgg tctgcaggat
    11281 ctgctgccat tgctcgaccg tctgctcgaa cagcggcaca agtccgccgc tgaccccggc
    11341 attggcgtag atcgcatcga gcgcgccgaa gctgtcgagc gcgcggccga cgaatgcctt
    11401 gacgtcgtct tcgcggccgg tgtcggcggt catcgcttgc gtactgccgc cgtccttggc
    11461 gatgagcttc gccgtctccg ccaatccgtc cgcattctga tcgacgatca ccacgcgggc
    11521 gccttcgcgc gcgaacagga tcgcgctggc gcggccgatg ccgctcgccg cgccggtgac
    11581 gatggcgacc ttgttgtcca gccggcccat gaatcccccc ttaagtaatc cccgcggttc
    11641 tttgttcagc ggttctgtcc cggcttccac agcacgttgc gcgcgccctt gccgttggcg
    11701 tgacgggcgg caacgaacag gaagtcggac agccgattga cgtatttcaa aacttccggc
    11761 gtgacgctct cgtccggctt gtcgttgagc tcggcaatca agcgctcggc gcgccggcat
    11821 acagtgcggg cgagatggag atgggcggcc gccgcgcccc ctcccggcag gataaaggat
    11881 cgcaacggtt cgagctcgtc attgagccgg tcgatctcgg cctcgagcca atcgacctgc
    11941 gccgcggtga ccgtgagccg cgccccgccc ggccccttgc ctttgccggg cgtggtgaga
    12001 tcggcgccga cgtcgaacag gtcgttctgg atgcgcgaca gcgccgcgtc gagcgcggca
    12061 tcctccgcgg tatgcagccg ggcgatgccg atcacggaat tcgtctcatc cagcgtgccg
    12121 taggcggcga tgcgcagatc gtatttcttg cgccgctcgc cggtgccgag cgcggtcgtg
    12181 ccgtcatcgc cggtgcgggt gtagatcttg ttgaggacga ccatgcctgc tcgctcgcgc
    12241 ttcagcgcgc catgaaccag atcgtgaaca tgatgacgac gatggcgatg aattgcagca
    12301 gcacgcgcag ccgcatcagc ttctgcgagg tattaccgga gccgccgcgc atcatgttga
    12361 cgaggccgag cagcaacacc accgcgaccg cgccgatggc gatcggtacc agccagtggg
    12421 agaggaacgt ggccatgccg ctccttgtag atgaggcgag tgacgccgcc aagctgggtg
    12481 cggccgcatc ttgcctcgga ttcggttttc caaggggcga ttatgcgaga ttggcgggta
    12541 gcacaaaggg cagcatgacg gcagtccaac gagccgccgt cgaatccgca agggtagtgc
    12601 tcagggcttc gacatcgagt tcatagtcgt ggtagagcca aatgacgaat agtgacccat
    12661 acgcgattgt tgatccgatt ttgctcccgt gggccaggag tcacgggata aacatagtca
    12721 ggctctatca tgatgactcg gtacgttctg ggtttttgat cgctcgggaa ataagcgcgc
    12781 ccaattgtgg ctaaatccgc cggacgctca tggcgctgtg acggtttgcg ctgccgcgtt
    12841 cgactcatca ggtcctacca aatggggggc gcgcgaggag cgtcacgcta ctctggcaac
    12901 actggcagaa acattggaat cgctgcggct tatcgtcttc ggctgggcgg gaccgggcgc
    12961 gttcacgtca ccttgaaaaa gggaccgccc caagtttcag aaggcaccag tgtcatcgtc
    13021 tgaccacgac gagtctcggt tcggcctagc ggacccgacg ccaaggcttc gtttttcagt
    13081 tcgacccgtc caacagccgc cgcgcgatca cgttggcctg aatctcggcg gcgccttcga
    13141 aaatactgag gatacgggcg tcgcagagaa ggcgcgagac cgggaattcg agcgcgaagc
    13201 cgttgccgcc gtggatctgc acggcgttgt cggcggcggc ccaggcgacg cgcgcggcga
    13261 ggagcttcgc catgccggcc tcgaggtcgc agcggcgg
//
LOCUS       DATMQB010000006         4004 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_622259, whole genome shotgun sequence.
ACCESSION   DATMQB010000006 DATMQB010000000
VERSION     DATMQB010000006.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4004)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4004)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4004
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_622259"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2121
                     /locus_tag="VNY79_00355"
     CDS             <1..2121
                     /locus_tag="VNY79_00355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX70926.1"
                     /translation="LDTGVFSVVGRNGMGKTTLCKAIMGLVRTSGGSVRIRGEEATGL
                     SPARIARLGVGYVPQGRRLWRSLSVDEHLRLAAGMRRGPWTTDRIYETFPRLAERKDH
                     GGSQLSGGEQQMLAISRALVTNPHLLIMDEPTEGLAPVIVTQVEEMLVRLGEDGDMSV
                     LVIEQNIGVATAVSGNVAIMVNGRVNRIIESARLAADRDLQQRLLGVGLHSDLESDVE
                     AGPTEADTAGAPQPARNKGPVRIFISNPTLPTRWSQPVPIARIEAAARIVSVGVTRLE
                     EVAQRRRESVTTQTSGPPVVLVVGTLDTKGAELRFIRDIIAGSGLRTRLIDVSTSGKA
                     SACDVSAQEIALNHGRGGSGVFGADRGASVTAMADAFARWLRRQGNIAGIISAGGSGG
                     ASLVAPGMRSLPIGVPKLIVSSVASGDVGPYVGPADITMMYSVTDVQGLNSISRAVLA
                     NGANALAGMVKARLDDSTAKPRDAGASLPAIGITMFGVTTPAVQRIAADLRDEFECLV
                     FHATGVGGRSMEKLVDSSQLAGVIDLTTTEVCDLLMGGVFPATDDRFGAVIRGRVPYV
                     GSVGALDMVNFGAPDTIPERYRQRKFHVHNPQVTLMRTAPEENERMGQWIGERLNQMD
                     GPVRFFLPEGGVSALDAPGQPFWDADADAALFGALERTVRQTANRQLIRIRNNINDPE
                     FAAAVVSAFRPLLGRAGGRRRMVR"
     gene            2125..2958
                     /locus_tag="VNY79_00360"
     CDS             2125..2958
                     /locus_tag="VNY79_00360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate hydrolase family protein"
                     /protein_id="HWX70927.1"
                     /translation="MARFERAALLKRFREMAARGEAIVGGGAGTGLSAKCEEAGGVDL
                     IVIYNSGRYRMAGRGSLAGLMPYGDANAIVLEMAGEVLPVVTRTPVLAGVNGTDPFRD
                     MDMFLNQLKALGFAGVQNFPTVGLIDGIFRANLEETGMSYALEIEMISKAHDKDMLTT
                     PYVFSEAEAAAMAIAGADIIVCHLGLTIGGSIGAQTALKLKDCPARIDAWAQAALSVN
                     SHILVLAHGGPIADPADADFIMKKTRYCHGFYGASSMERLPVERALTEQVRKFKAIGA
                     R"
     gene            2983..>4004
                     /locus_tag="VNY79_00365"
     CDS             2983..>4004
                     /locus_tag="VNY79_00365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007593019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HWX70928.1"
                     /translation="MSGILAGELILWLIVAIVAIVIGVYIVNWLYHRSSKEVSFVRTG
                     FLGERVVINGGAFVLPFIHDYTSVNMNVLPMGIVRAKQDAVITRDRMRVDIEADFYVR
                     VEATREAVSIAATTLGRRTMEPEQLHALLSGKFVSAIRSVASEMTMEQMHEQRGEYVA
                     RVKAAAAEALAQNGLELESVAITDLDQTDLEYFNPSNRFDAEGLTRLMEDIEARRKLR
                     NDIEQDSMIKIRSRNLEAERQALDIERESETARLEQERDIEMRRALQRTEVARERALR
                     ETESEQAQITARETIERAKIANEQAITEARIASERETRQKEIERTRAVEEKELQAREE
                     IEKARIA"
BASE COUNT          736 a         1306 c         1302 g          660 t
ORIGIN      
        1 ctcgataccg gcgtgttctc ggtggtcggc cgcaacggca tgggcaagac caccctttgc
       61 aaggccatca tgggcctggt gcggacaagc ggcggctcgg ttcgcattcg cggcgaggag
      121 gccaccgggc tcagcccggc ccggatcgca cgtctcggcg tcggttacgt cccgcagggt
      181 cggcgcctgt ggcgctcact cagcgtcgac gagcatctgc gcctggctgc cgggatgcgg
      241 cgcggaccct ggaccaccga ccgcatctac gaaacattcc cccggcttgc cgaacgcaag
      301 gaccacggcg gcagtcaact ctccggcggc gagcagcaga tgctcgcgat ctcgcgcgcg
      361 ctagtgacca atccacatct tttgatcatg gatgagccga ccgaaggatt ggcgccggtg
      421 atcgtcaccc aggtagagga gatgctggtg cgcctcggcg aagacggcga catgtcggtg
      481 ctcgtgatcg agcagaacat cggcgtggcg acggcggtgt cggggaatgt cgctatcatg
      541 gtcaacggcc gcgtcaaccg catcatcgag tccgcgcgcc ttgccgccga tcgcgacctg
      601 caacagcgcc tgctgggcgt cgggctccac agcgaccttg aatcggatgt cgaagcaggc
      661 cccacagagg cagatacggc cggcgcacca cagcccgcac ggaacaaggg gccggtgcgg
      721 atctttatct ccaatccgac gctgccgacg cgctggtcgc agccggtacc gatcgcgcgc
      781 atcgaggccg ccgcccgcat cgtctcggtg ggcgtcacgc gacttgagga ggtcgcgcag
      841 cgaaggcgcg agtcggttac gacccagacc tccggaccgc cggtcgtgct ggtcgtcggc
      901 acactcgaca ccaaaggcgc agagctgcgc ttcatccgtg acatcatcgc aggcagcggc
      961 ctgcgcaccc gcctgattga cgtctcaacc agcggcaaag cttccgcctg cgacgtctcc
     1021 gcccaggaga tcgcattgaa ccatggccgc ggcggatcgg gggtattcgg cgccgaccgc
     1081 ggggcatcgg tgacggcgat ggcggatgcc tttgccagat ggctgcgccg ccagggcaat
     1141 atcgccggca tcatctccgc aggcggttcc ggcggagcct cgctggtcgc gccgggcatg
     1201 cgcagcctgc ccatcggcgt gccgaagctg atcgtctcgt cggtcgcttc gggcgatgtc
     1261 ggtccctatg tcggacctgc cgacatcacg atgatgtatt cggtgaccga cgtgcagggc
     1321 ctcaactcga tctcgcgcgc ggtgcttgcc aacggcgcaa acgcgctggc cggcatggtc
     1381 aaggcgcgcc tcgacgacag caccgccaaa ccacgcgacg cgggcgccag ccttcccgct
     1441 atcggcatca ccatgttcgg cgtgacgacg cccgccgtgc aaaggatcgc ggccgacctg
     1501 cgcgatgagt tcgaatgcct ggtgttccac gcgaccggcg tcggcgggcg ctcgatggag
     1561 aagctcgtcg attccagtca gctggcggga gtcatcgatt tgaccactac cgaagtctgc
     1621 gacctcttga tgggcggcgt gtttccggcc acggacgacc gttttggcgc ggtcatccgc
     1681 ggccgcgtgc cctatgtcgg ctcggtcgga gcgctcgaca tggtcaattt cggcgcgccg
     1741 gacacgattc ccgaacgtta ccgacagcgc aagttccacg ttcacaatcc gcaggtcacg
     1801 ctgatgcgta ccgcgccgga agaaaacgag cggatgggac aatggatcgg cgagcggctc
     1861 aaccagatgg acgggccggt gcgcttcttc ctccccgaag gcggcgtctc cgcactcgat
     1921 gcgccgggcc agccattctg ggatgccgac gccgacgcgg ctctgttcgg cgcgctggag
     1981 cggacggtgc gccaaaccgc taaccgccag ctcattcgta tcagaaacaa catcaacgat
     2041 cccgaattcg ccgccgctgt tgtcagcgcg ttccgtcccc tgctcgggcg cgccggaggg
     2101 cggcggagaa tggtgaggtg acccatggcc aggtttgagc gcgccgcgct gttgaagagg
     2161 tttcgcgaga tggcagccag gggcgaggcg atcgtcggcg gcggcgccgg caccgggctg
     2221 tcggccaaat gcgaggaggc cggcggcgtc gacctgatcg tgatctacaa ttccggccgc
     2281 taccgcatgg cgggccgcgg ctcgctcgcc ggactgatgc cctatggcga cgccaacgcg
     2341 atcgttttgg agatggcggg cgaggtgctc ccggtcgtga ccaggacgcc ggtgctcgcg
     2401 ggcgtgaacg gcactgatcc attccgcgac atggacatgt tcctaaatca gttgaaggcg
     2461 ctgggctttg ccggcgtgca gaactttccg accgtcggcc tgatcgacgg catcttccgc
     2521 gccaatcttg aagagaccgg catgtcctac gcgctggaga ttgagatgat ctcgaaggcg
     2581 cacgacaagg acatgctgac gacgccctat gtcttcagcg aagcggaagc cgcggcaatg
     2641 gcgatcgccg gtgccgatat catcgtctgc catctcggcc tcaccatcgg cggctcgatc
     2701 ggtgcacaga ccgcgctgaa gctcaaagat tgccccgcgc gcatcgatgc ctgggcgcaa
     2761 gccgcgctta gcgtcaactc acacatcctc gtgctcgcgc atggcggtcc gatcgcagac
     2821 cccgccgacg ccgatttcat catgaagaag acccgttatt gccacggttt ctacggcgcc
     2881 tcctcgatgg agcgcctacc cgtggaacgc gcgctcacgg aacaggttcg gaaattcaag
     2941 gcgatcggcg cgcgttgagc gccgggacca agggaggaaa agatgtcggg gattttggct
     3001 ggtgaattga tcctctggct catcgttgcg atcgtcgcca tcgtcattgg cgtgtacatc
     3061 gtaaactggc tctaccatcg ctcgtcaaag gaggtctcct tcgtccgcac cggtttcctc
     3121 ggcgagcgcg tcgtgatcaa cggcggcgcc ttcgtgctgc ccttcattca cgactacacg
     3181 tccgtcaaca tgaacgtgtt gccgatgggg atcgtgcgcg ccaaacagga cgccgtcatc
     3241 acccgcgacc ggatgcgcgt cgatatcgag gcggactttt acgtccgcgt agaggctacc
     3301 cgcgaagccg tctcgatcgc cgccacgacg ctcggacgcc gcaccatgga gcccgagcag
     3361 ctccacgcat tgctttccgg caaattcgtc tccgccatcc gctcggttgc ttccgagatg
     3421 accatggagc agatgcacga gcagcgcggc gaatatgtcg cgcgcgtcaa ggccgccgcc
     3481 gccgaagcgc tggcgcagaa cggactcgag ctcgaatcgg ttgcaattac cgacctcgac
     3541 cagaccgatc tcgaatattt caatccctcg aaccgcttcg acgccgaagg tctgacccgc
     3601 ctgatggagg acatcgaggc caggcgcaaa ctacgcaacg acatcgaaca ggattcgatg
     3661 atcaagatcc gttcccgcaa tctcgaggcc gaacggcagg cgctcgatat cgagcgcgag
     3721 agcgaaaccg cccgcctcga gcaggagcgc gacatcgaga tgcgtcgcgc cctgcagcgc
     3781 acggaggtcg cgcgcgagcg tgcgttgcgg gagaccgaat ccgagcaggc gcagatcacc
     3841 gcgcgcgaaa cgatcgagag ggcgaaaatc gccaacgagc aggccatcac cgaggctcgc
     3901 atcgcatccg agcgcgagac ccggcagaag gaaatcgaac gcacgcgcgc ggtggaggaa
     3961 aaggagctgc aggcgcgcga ggagatcgaa aaggcgagaa tcgc
//
LOCUS       DATMQB010000007         2754 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4343653, whole genome shotgun sequence.
ACCESSION   DATMQB010000007 DATMQB010000000
VERSION     DATMQB010000007.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2754)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2754)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2754
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4343653"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..888
                     /locus_tag="VNY79_00370"
     CDS             <1..888
                     /locus_tag="VNY79_00370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-E domain-containing protein"
                     /protein_id="HWX70929.1"
                     /translation="AEYLARILDTTYRLTALPLAYVGASNEWESAVATAGCARAFFAA
                     HGEANEETVTEFLAFSTTNPSSIRNCFETARVNARAVRTALTIEMWDTINGAWLELKK
                     WGNGPRSREEFARFLRWVQESSLRFDGSAYRTMLRNDAYWFSRLGVYIERADNTARIL
                     DVKYHLLLPEHEQVGGPLDYFQWAAILRSVSALTAYQWVYRANVKPWLVADLLMLRDE
                     MPRSLASCYENLVQNLDRIAAAYGRQGPAQRQARVIRARLENLRIDEIFQSGLHEFID
                     HFVEDNNRLGTAIAQQYLM"
     gene            993..1796
                     /locus_tag="VNY79_00375"
     CDS             993..1796
                     /locus_tag="VNY79_00375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HWX70930.1"
                     /translation="MRLRIAHSIVRHYDPPAASAIQVLRLTPRNHEGQYVIDWRIDVS
                     ADARLVAHEDAFGNFTHVFTADGPLEELSVNVDGAVETQDTGGLIRDAVERFPPSLFL
                     RDTSLTRADRAIRDFAHQVRAARGGEVSAELHALLRGLRDEIAPARVPSEPAATAPEI
                     FARKRGGAQDSTHVFIGAARSLGIPARYVAGYFCAGGGATPQSDYAWAEAFVPDVGWV
                     GFDPAKGACPTDAYVRVAVGLDALGAALMRGKRYGAGDETLKIAVKMDQ"
     gene            2039..>2754
                     /locus_tag="VNY79_00380"
     CDS             2039..>2754
                     /locus_tag="VNY79_00380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase"
                     /protein_id="HWX70931.1"
                     /translation="MTYCCGILVREGLVIFADTRTNAGVDNIATFRKLHVFKDPGKRI
                     MALASAGNLSISQSVVSILTEGYDNPETGQRETLMDSPTMFQGAQRVGHVIRTLHATE
                     GKELEASDVTFDVSFLFGGQIAGERMRLFMVYSAGNFIECTTDTPYLQIGEHKYGKPV
                     LDRAVGYGMDLYDALKVGLISIDSTMRSNLSVGMPIDLLVVRRDTCDAELIYRIEPGE
                     PYFSDLRERWSAALRAAHIA"
BASE COUNT          471 a          957 c          839 g          487 t
ORIGIN      
        1 gccgaatatc tggcgcgcat cctcgacacc acctaccggc tgacggcgtt gccgctcgct
       61 tatgtcggcg cctcgaacga atgggaatcc gcggttgcga ccgccggctg cgcgcgcgcg
      121 ttcttcgccg cccatggcga ggcgaacgaa gagaccgtca ccgaattcct cgccttctcg
      181 accaccaatc cgtcctcgat ccgcaactgc ttcgagaccg cgcgggtcaa tgcgcgggcg
      241 gtgcgtaccg cgctcaccat agagatgtgg gacaccatca acggcgcctg gctcgagctg
      301 aagaaatggg gcaacggccc gcgctcccgc gaggagttcg cgcgcttcct gcgctgggtg
      361 caggaatcct cgctccgctt cgacggctcc gcctaccgca ccatgctgcg caacgacgcc
      421 tactggttct cgcggctcgg cgtctatatc gagcgcgccg acaacaccgc gcgcatcctc
      481 gacgtcaaat atcacctgct gctgcccgag cacgagcagg tcggcggccc gctcgactac
      541 ttccagtggg cggccattct gcgctcggtg tcggcgctca ccgcctatca gtgggtctat
      601 cgcgctaacg tcaagccatg gctggtggct gaccttttga tgctcaggga cgagatgccg
      661 cgctcgctcg ccagctgcta cgagaacctg gtgcagaacc tcgaccggat cgccgccgcc
      721 tacggccgcc aggggccggc gcagcggcag gcgcgagtga tccgcgcgcg cctggaaaat
      781 ctccgcatcg atgaaatttt tcagagcggc ctgcacgagt tcatcgacca tttcgtcgag
      841 gacaacaacc gcctcggcac cgcgatcgcg cagcaatatt tgatgtgacc ggaggacgga
      901 agacagacga cagagacaga tgacggagga cagaagaatt tttgttgctt atcatctgcc
      961 ctctgtcgtc cgtgatctct cctccgactg ccatgcgcct gcgcatcgcc cacagcatcg
     1021 tccgccatta cgacccgccg gccgccagcg cgatccaggt gctgcggctc accccgcgca
     1081 accacgaggg tcaatacgtg atcgactggc gcatcgacgt ctccgccgac gccaggctcg
     1141 tcgcccacga ggacgcgttc ggcaacttca cccatgtctt caccgccgac ggcccgctcg
     1201 aggagttgag cgtcaatgtc gacggcgcag tggagaccca ggacaccggt gggctcattc
     1261 gcgatgccgt cgagcggttt ccgccgagcc tcttcctgcg cgacacgtct ttgacccggg
     1321 ccgatcgggc gatccgcgat tttgcgcacc aagtgcgcgc cgcgaggggc ggagaggttt
     1381 ccgctgaact tcatgccctg ctgcgagggc tgcgtgacga gatcgccccc gccagggttc
     1441 cgtcggagcc cgcggcgacg gcaccggaaa tttttgcccg caagcgcggc ggcgcccagg
     1501 attcgaccca cgtcttcatc ggcgcagccc gcagcctcgg tattcccgcc cgctacgtcg
     1561 ccggctactt ctgcgccggc ggcggcgcaa cgccgcagag cgactacgcc tgggccgaag
     1621 cctttgttcc cgatgtcggc tgggtcggct tcgatccggc gaaaggcgcc tgcccgaccg
     1681 acgcctatgt gcgcgtcgcc gtcggcctcg atgcgctcgg cgccgccctc atgcgcggca
     1741 agcgctacgg cgccggcgac gagacgctca aaatcgcggt caagatggac cagtgaacgc
     1801 gccggctgcc gcgctctgcc aggggcgctt tcagctattt ctcgccattc gggattgccg
     1861 tgcagcggca aggccggaat ccactatcca ccgcgcccgg ggccatggat tgcgggctcc
     1921 gcgccagcgc gcggccccgg aatgacgact gccttcaggc tctctccgtc attggcacgc
     1981 gcgttgccgc aaaccagtca ctgccgctat agatagccta cgcgcggagc agcgatcgat
     2041 gacctattgc tgtgggattc tggtgcgcga ggggctggtg attttcgccg acacgcgaac
     2101 caatgccggt gtcgacaaca tcgcgacctt ccgcaagctg cacgtgttca aggatcccgg
     2161 caagcggatc atggcgctcg cttcggcggg aaacctgtcg atcagccaat cggtggtcag
     2221 catcctgacc gaaggctacg acaaccccga gactgggcag cgcgagacgc tgatggactc
     2281 cccgaccatg ttccagggcg cccagcgtgt cggccacgtc atccgcacct tgcacgcgac
     2341 cgaaggcaag gagctcgaag cgtccgatgt gacgttcgac gtatcctttc tgttcggcgg
     2401 ccagattgct ggcgaacgca tgcggctgtt catggtctat tccgccggca atttcatcga
     2461 atgcaccacc gacacgccgt acctgcagat cggcgagcac aaatacggca agccggtcct
     2521 cgaccgcgcc gttggttacg gcatggatct ctacgatgcg ctcaaggtcg gcctcatctc
     2581 catcgactcg accatgcggt cgaacctcag cgtcggcatg ccgatcgatc tcttggtcgt
     2641 acggcgcgac acctgcgatg ccgagttgat ctaccgtatc gagccgggcg aaccctattt
     2701 ctccgatctg cgcgagcgct ggtcggccgc gctgcgcgcc gcccacatcg ccat
//
LOCUS       DATMQB010000008         3968 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2173074, whole genome shotgun sequence.
ACCESSION   DATMQB010000008 DATMQB010000000
VERSION     DATMQB010000008.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3968)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3968)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3968
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2173074"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1110)
                     /locus_tag="VNY79_00385"
     CDS             complement(<1..1110)
                     /locus_tag="VNY79_00385"
                     /inference="COORDINATES: protein motif:HMM:TIGR02262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016405 - CoA-ligase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="benzoate-CoA ligase family protein"
                     /protein_id="HWX70932.1"
                     /translation="MRRKPYNAAADFVDAPVARGFGKKIAFIDPDHSLTYAELQERTC
                     RFAAALQSLGLRPEERLALLIYDNVDFPVAFWGGMRAGNVVLPLNTLLTAEQYAYILV
                     DSRAAALVVAAPLAKTILSVLDRLPRLRTVILIDAGATETAAFSGRDVHDFSDVIARG
                     SAAVFVAPTLSDEVAFWMYTSGSTGEPKGVKHVHTTLMAAARLMGQGVIGIREDDVVY
                     SAAKLFFSYGLGNAMAFPLSVGANSVLLPQRVTPEAAFEVMRRHQPTIFYGVPTLYAS
                     MLAHKEMKRGAGSDRLRLAVSAGEALPADLGKRWQSAAGVDVLDGIGSTEMFQTFLSN
                     RPGDVRYGTTGKTVPGYDLKIVDEQGREATVDEIGE"
     gene            complement(1349..2230)
                     /locus_tag="VNY79_00390"
     CDS             complement(1349..2230)
                     /locus_tag="VNY79_00390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2189 domain-containing protein"
                     /protein_id="HWX70933.1"
                     /translation="MATAHVLVGAGTQAVQPVRRIAPADLLQALRCGLDDFAAMPSHA
                     VFLCIIYPLLGIMLVSLTFGYTMLPLLFPLAAGFALIGPIAAIGLYELSRRREAGLDT
                     ASTHALDVLRSRSLGAIVALGILLMAIFLVWLAVAQAIYVAYFGYAAPVSIRQFIDDV
                     LFTPAGWGLIIVGTGVGFLFAALVLTISVVSFPLLLDRDVGAAGALLTSVRAVAASPV
                     TMALWGLIVAGLLLVASLPCFLGLTVVMPVLGHSTWHLYRRVVEPDPAAQAAFRPERT
                     NYRSAADFPSALFTPRE"
     gene            complement(2511..>3968)
                     /locus_tag="VNY79_00395"
     CDS             complement(2511..>3968)
                     /locus_tag="VNY79_00395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013214974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HWX70934.1"
                     /translation="AGTKVTNYLPFLLLFVALLIALGFEFVNGFHDTANAVATVIYTR
                     ALPANIAVVWSGVWNLAGVLASSGAVAFGIISLLPVELILQVGSHAGFAMVFALLIAA
                     IIWNLGTWSFGLPASSSHTLIGSIIGVGIANALLHGRGGTSGVDWGKAKEVGEALLLS
                     PLFGFALAAALLLLLKSIVRIPALYAEPKGEQPPPWWIRGILILTCTLVSFFHGSNDG
                     QKGMGLIMLILIGTVPTAYALNRALPESQVQRFVTASQAASAVIQQKAAGHSVLGDPR
                     PAVTAYVASHILNEGTYPSLAVLVRNIAAQVNQYGSLARMPAEAVGNARNDMYLASEA
                     IRFLMKDSASELSPDEIKTLNTYKQSLDQATKFIPNWVKVAVAITLGLGTMVGWKRIV
                     ITVGEKIGKTHLTYAQGACAEITAAATIGAADVLGLPVSTTHVLSSGIAGTMAANGSG
                     LQFATVRNIALAWVLTLPAAMIISGTPYWVFSGLF"
BASE COUNT          747 a         1267 c         1358 g          596 t
ORIGIN      
        1 ctcgccgatc tcgtccaccg tcgcctctcg cccctgctca tcgacgatct tgaggtcgta
       61 accgggaacc gtcttgcccg tggtgccgta gcggacgtcg cccggccgat tgctgagaaa
      121 ggtctggaac atctcggtcg agccgatgcc gtcgaggacg tcgacgccgg cggcgctctg
      181 ccagcgcttg cccagatcgg ccggcagcgc ctcgccggcg gagaccgcaa gacgcaggcg
      241 atcggagccg gcgccgcgct tcatctcctt gtgcgcgagc atcgacgcat agagcgtcgg
      301 cacgccgtag aagatggttg gttggtggcg gcgcatcacc tcgaacgccg cctcgggggt
      361 cacgcgctgc ggcagcagca cgctgttcgc gccgaccgac agcgggaagg ccatggcatt
      421 gccgaggccg taggagaaga acagcttggc cgcggagtag acgacatcgt cttcgcggat
      481 gccgatcacg ccctggccca tcagccgcgc cgcggccatg agcgtggtgt gcacgtgctt
      541 gacgcctttg ggctcgccgg tcgatcccga cgtgtacatc cagaaggcga cttcgtcgga
      601 gagcgtcggg gccacgaaca cggcggcgct cccgcgcgct atgacgtcgg aaaagtcatg
      661 cacatcgcgg ccggaaaatg ctgcggtctc ggtggcgccg gcatcgatca atatgacggt
      721 gcgcaggcgc ggcagccgat cgagaaccga aaggatcgtc ttggcaagcg gcgcggcgac
      781 caccagagcc gcggcgcggc tgtcgaccaa aatgtaggcg tactgctctg cggtgagcag
      841 cgtgttgagc ggcagcacca cattgccggc ccgcatcccg ccccagaagg cgacgggaaa
      901 atccacgttg tcgtagatga ggagcgccag gcgctcttcc ggccgcagcc cgagactttg
      961 cagcgccgcg gcgaaccggc acgttcgctc ctgcagctcg gcgtaagtca gcgaatggtc
     1021 cgggtcgatg aaggcgatct tcttgccgaa cccgcgcgcg accggcgcat cgacgaaatc
     1081 agcggcggcg ttgtacggct ttcgccgcaa caggtcttcc aacatcgaac gacggcccct
     1141 tcctcgcggt gctgctgccg cgaccggggc ggactacgtc tgcatgcgct ctcaagggcg
     1201 ccaacaagcc cgcctcaacc cgtggccatg ataggcattt gtcacgtgct gacaaatcga
     1261 atgcctgccg gtttcgtgcc agcaaatgcc ggcattgttc cagcagcggc aacgctccgt
     1321 ggacgacaga tcagcggtcg gggtcgcgct attcgcgcgg cgtgaacagg gcggacggga
     1381 aatccgcggc ggaacgatag ttcgtgcgct ccggacggaa agccgcttgc gcggccggat
     1441 cgggctccac cacccgccga taaagatgcc aggtcgaatg gccgagcacc ggcatgacta
     1501 cggtgaggcc gaggaagcag ggcagcgatg cgaccagcaa caagccggcg acgatcaatc
     1561 cccacagcgc catggtgacc gggctcgccg cgaccgcgcg cacggacgtg agcagtgcgc
     1621 ccgcggcgcc gacgtcgcga tcgagcagca gcggaaacga gaccacgctg atggtcagga
     1681 ccagcgcggc aaacaggaat ccgacgccgg tgccgacgat gatgaggccc cagcccgccg
     1741 gcgtgaacag cacgtcgtcg atgaactggc ggatggaaac cggcgcggcg tagccgaaat
     1801 aggccacata gatcgcctgc gcgaccgcaa gccagacgag gaagatcgcc atgagcagaa
     1861 tgccgagcgc gacgatggcg ccaagcgagc gcgaacgcag cacgtcgagg gcgtgagtcg
     1921 aagcggtatc gagtccggcc tcgcgccggc ggctgagctc gtagaggccg atcgccgcga
     1981 tcggaccgat cagggcaaaa ccggcggcca gcggaaacaa caacggcagc atcgtgtagc
     2041 cgaaggtcag cgagaccagc atgatgccga gcaagggata gatgatgcag agaaacacgg
     2101 cgtggctcgg cattgcggcg aagtcgtcga gaccgcagcg caacgcctgt aaaaggtcgg
     2161 caggcgcaat acggcgcacc ggctgcacgg cctgcgtgcc cgcaccgacg agaacgtggg
     2221 cagtcgccat cgtcacctcc tcgcgtttcc agatgagccg tgcggtacgc gatgaggccg
     2281 caaagcgtgc ccgcctgcca atgcgctgat cggcggctca gacccttgag gttgagcctg
     2341 taacgccgga atggcgagga ggttcgcttc acaatgcggt gtgcgccgtt cccgaatcgg
     2401 gtgcggccca ggtggccgag aggaaaaggc ccgttgcggg gccttttctt ctcatttcac
     2461 cgggcgcgcc gccgttttgt tgaagggccg cgcccgttgt tcgcggccgc tcagaacagg
     2521 ccggagaaca cccagtaggg cgtcccggaa atgatcattg ccgccggcaa cgtgagcacc
     2581 cacgccaagg cgatgttgcg caccgtggca aactgcagcc ccgaaccgtt cgcggccatg
     2641 gtgccagcga tgccggagga caggacgtgc gtcgttgaga ccggcaaccc cagaacatcg
     2701 gcggcgccga tggtcgctgc cgcagtgatc tcggcgcagg cgccctgcgc gtaggtcagg
     2761 tgtgtcttgc cgatcttctc gcccacggtg atgacgatgc gcttccatcc caccatcgtc
     2821 cccagcccga gcgtgatcgc caccgcgacc ttcacccagt tggggatgaa tttcgtcgcc
     2881 tgatcgagcg actgcttgta ggtgttgagc gtcttgatct cgtccggcga cagctcgctc
     2941 gcgctgtcct tcatcaggaa acggatggcc tccgaggcga ggtacatgtc gttgcgggcg
     3001 ttgccgacgg cttccgccgg catccgcgcc agcgacccgt attgattgac ctgggcggcg
     3061 atgttgcgca ccaggaccgc caatgacgga taggttccct cgttgaggat atggctggcg
     3121 acgtaggcgg tgacggccgg gcgcggatcg ccgaggacgc tgtgccctgc cgccttctgc
     3181 tggatgacgg cgctcgccgc ctgcgaagcc gtgacgaacc gctgcacttg gctctccggc
     3241 agcgcgcgat tgagcgcgta ggccgtcggc actgtgccga tcaggatcag catgatcagg
     3301 cccatgccct tctgcccgtc gttggagccg tggaagaagc tgaccagcgt gcaggtcagg
     3361 atgaggatgc cgcggatcca ccagggcggc ggctgttcgc ccttcggttc ggcatagagc
     3421 gccggaatgc ggacgatgga tttcagcagc agcaacagag cggcggcgag ggcgaagccg
     3481 aacaacggag agagcagcag cgcttcgccg acctccttcg ctttccccca atcgaccccc
     3541 gacgtgccgc cgcggccgtg cagcagcgcg ttggcgatgc cgacgccgat gatcgagccg
     3601 atcagggtgt gcgagctcga tgccggcagc ccgaacgacc aggtgccgag attccagatg
     3661 atcgccgcga tcaggagggc gaaaaccatg gcgaagccgg cgtggctgcc gacctgcagg
     3721 attagctcga ccggaagcag cgaaatgatg ccgaaggcga ccgcgcccga ggaggcgaga
     3781 acgccggcga ggttccacac gccggaccag accaccgcga tgtttgccgg cagcgcgcgc
     3841 gtgtagatga cggtcgccac ggcgttcgcg gtatcgtgga agccgttgac gaattcgaag
     3901 ccgagcgcga tcaggagcgc gacgaagagg agcaggaacg gcaggtagtt cgtgaccttc
     3961 gtgccggc
//
LOCUS       DATMQB010000009         7469 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4343985, whole genome shotgun sequence.
ACCESSION   DATMQB010000009 DATMQB010000000
VERSION     DATMQB010000009.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7469)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7469)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7469
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4343985"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..138
                     /locus_tag="VNY79_00400"
     CDS             <1..138
                     /locus_tag="VNY79_00400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HWX70935.1"
                     /translation="RGLSAYDADDAEKIRGRSSADIASILGFSGRTEMVHRDDLVVGR
                     E"
     gene            797..2089
                     /locus_tag="VNY79_00405"
     CDS             797..2089
                     /locus_tag="VNY79_00405"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004350 - glutamate-5-semialdehyde
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HWX70936.1"
                     /translation="MNAPLTALAAPGNLAAAMCAIGRDARSASHALALAPAARKNDAL
                     AGMAKAIRHARSAILDANAEDVAEAKSGGATAAFLDRLTLDADRVEAVAAGLEVIRKL
                     KDPVGTVMASWRRPNGMRIERVRVPLGVVGVIYESRPNVTADAGALCLKAGNAVILRG
                     GSESFRTARAIHTALVEGLVAAELPAAAITLVPTRERAAVGMMLAGLDGAIDVIVPRG
                     GKSLVDRVQTEARVPVFAHLEGVCHVYVDRKAKLAMAKSIVLNAKMRRTGVCGAAETL
                     LVDRADAPRLLKPLVAMLLDAGCEIRGDAAVQAVDRRVKPASEADWGTEYLDAILTAG
                     VVDGVDGAIAHIERYGSHHTDAIVTEDRQSAEKFLREVDSAIVLHNASTQFADGGEFG
                     FGAEIGIATGRLHARGPVGVEQLTSFKYRVHGSGQTRP"
     gene            2287..2862
                     /locus_tag="VNY79_00410"
     CDS             2287..2862
                     /locus_tag="VNY79_00410"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HWX70937.1"
                     /translation="MRIGLFGGTFDPVHAAHRAACLLAMKRLGLDRVWWLVTPGNPLK
                     DTRGLAPLAERVHAAQVLAHHPRIDVTDLETQLGTRYTHQTIAYLRQGCPGVRFVWIM
                     GADNLRSFHRWQRWRGIAALVPIAVVDRLGPSLYATAGIAGQALAYARLPESAARTLP
                     ERRPPAWLYLHGLKSPLSSTALRAARALQSG"
     gene            3017..3364
                     /gene="rsfS"
                     /locus_tag="VNY79_00415"
     CDS             3017..3364
                     /gene="rsfS"
                     /locus_tag="VNY79_00415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010683516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0017148 - negative regulation of
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HWX70938.1"
                     /translation="MRPDAEEILRLVLARLDDMKAEDTLTIDLRGKSSIGDYMVVSSG
                     RSQRHVGSVADRVIEDLHKVRVAARVEGVPHCDWVLIDAGDVIVHVFRPEVRAFYNLE
                     KMWSANGPVQRAS"
     gene            3483..3965
                     /gene="rlmH"
                     /locus_tag="VNY79_00420"
     CDS             3483..3965
                     /gene="rlmH"
                     /locus_tag="VNY79_00420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HWX70939.1"
                     /translation="MRLLICAIGRLKQGPERELAAWYRKRAEAIGRPLGLRAIEIVEI
                     RESRAQDAERRRIEESIALANVIPEEGMAVILDQHGENLDSAALAALLQRWRADNCPA
                     AAFIIGGADGLAPNLAQRAKFRLAFGAATWPHQLVRIMLLEQLYRAGTILAGHPYHRG
                     "
     gene            4097..5494
                     /locus_tag="VNY79_00425"
     CDS             4097..5494
                     /locus_tag="VNY79_00425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HWX70940.1"
                     /translation="MILRRSSRTDPRLVLGSALAFALPLGANPAALAQTPPAKAPVQA
                     PVAPGPVPYLAPQPALPGSPPTDADALKQRDQELEAARARERESAENQAKLKREIEAL
                     GDDRRALNQQLIDTAAHVRGVEASIEATEGRLKPLDEQERLFQKSLDERRAVIIEILA
                     ALQRVGHQPPPALMVRPEDALQAVRMAIMLGAVLPEMRAQAEALAGDLADLLRVRNDI
                     VAERDHLARDLAQLGHDQLRMNMLIDERQSKQSNAEQALDSERQRATDLARQVDGLKD
                     LIGKLEANLDSANRAAHLAARAAEEGRPDVAALNDAGRLAPAVAFAATRGRLPLPVNG
                     VRIRDFGTADGFGGNQKGVSIATRTGAQITAPCDGWVVYAGAFRSYGQLLILNAGGGY
                     HVLLAGMERISVDLGQFVLTGEPVAVMGSGSQVSTAAAAKPKQPVLYVEFRKDGTPID
                     PGPWWATNEGEKVRG"
     gene            5491..6825
                     /locus_tag="VNY79_00430"
     CDS             5491..6825
                     /locus_tag="VNY79_00430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HWX70941.1"
                     /translation="MMRKTSFIFLGMAAGVGLTLLATQPHNVFTGSSAKAAASDTYRQ
                     LNLFGDVFERVRADYVEKPDDGKLVESAINGMLAGLDPHSSYMDPKSFRDMQVQTRGE
                     FGGLGIEVTMEDGLVKVVAPIDETPAAKAGVMANDIITHLDDEAVQGLTLNQAVEKMR
                     GPVNTKIKLRIMRKGGDKPIEVTIVRDVIRVRSVRSHSEGEDIGYIRITQFNEQTTDG
                     LKKAIGDLSSQLGSDKVKGFVVDLRNNPGGLLDQAISVSDAFLEKGEIVSTRGRNSEE
                     TQRFNARPGDLTKGKPVILLINGGSASASEIVAGALQDHKRATLIGTRSFGKGSVQTI
                     IPLGAGNGALRLTTARYYTPAGRSIQAKGITPDIEVLQDVPDDLKARTDSKGEASLRG
                     HLKAEGSEETGSQSYVPPDEKDDKALKMALDLLRGAVSDAAFPPNPKAAVPN"
     gene            7060..>7469
                     /locus_tag="VNY79_00435"
     CDS             7060..>7469
                     /locus_tag="VNY79_00435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HWX70942.1"
                     /translation="MTADELSAPLGQMPRKQRRKFPIAVPNVIAGALALFLGTFVLWT
                     IVGDDPFGGEPMVTAPVDLRAAAAVKKPEPPAAPENAANPQGPHRYDGPAPASAPPEK
                     NAPANPPPNTKTVTIIDGKTGARQEVVIPDPAGAA"
BASE COUNT         1276 a         2557 c         2468 g         1168 t
ORIGIN      
        1 cgcggcctat ccgcctacga tgccgatgac gccgagaaaa tccgcggccg ctcgtcagcc
       61 gacatcgcct cgatcctcgg cttcagcggc cgcaccgaga tggtccaccg cgatgatctg
      121 gtcgtcggcc gggaatgaca gagcgaattt tgggcgaatt tggccgcgcg acaacgcgcc
      181 gccgagtttc gccgcgcacg acgcgtgatc gttccagagg gaacccgaaa agagtgaacc
      241 ccggccgcta aagcggccgg ggttctaacg ccgggtgatt gagggtgagg ggctgggggg
      301 cttcgcccgg cgctgaatac tcaacgtcgc gaccgtcggg gtgttcctcg ctccgttaaa
      361 aatttttttc gggtcgcgag cgggcggctt ttcgccttgc gctgcaagcg gttgcgtcgt
      421 cgcgaggagc gccggcgcgc cgccggcagg ccgaaatcgg gcggaacatt gatgcggctt
      481 ccatccggca tcagaacgta gcgcgaaatc acgcgcaagt tcccggactc gccgccgtat
      541 ccctcgacga catagcttgc ccctaccggt aattgctccg gcaaaaggcg ggagaaatga
      601 tccactgctc gttccatgac gcaccctctc gttgcggccg gtggcgaaac gcgggccgct
      661 gcggtgaggt tccgcggatt gtgtgacggc gccgcgaact gctgtggatt gtgtggacaa
      721 gacaggggca ccgcactgcc tcgccgggcc tcccggaaca tggtaggaag cggcgaacgc
      781 aagacggatc aatgccatga atgccccgct cacggcgctc gccgcacccg gcaacctcgc
      841 cgcggccatg tgcgcgatcg gccgcgacgc gcgcagcgca tcgcatgcgc tcgcgctggc
      901 gccggccgcg cggaagaacg acgcgctcgc cggcatggca aaggccatcc gccacgcacg
      961 gtcggcgatc ctcgacgcca acgccgagga cgtggcggag gcgaagtccg gcggtgcgac
     1021 tgccgcgttt ctcgaccggc tcacgctcga cgccgatcgt gtcgaggcgg tggcggccgg
     1081 actcgaggtc atccgcaagc tcaaggatcc ggtcggcacg gtcatggcgt catggcggcg
     1141 tcccaacggc atgcgcatcg agcgtgtgcg cgtgccgctc ggcgtcgtcg gcgtgatcta
     1201 cgagagccgg cccaacgtga cggccgatgc cggcgcgctc tgcctcaagg ccggcaacgc
     1261 cgtgatcctg cgcggcggct ccgaaagttt ccgcaccgcg cgcgccatcc ataccgccct
     1321 ggtcgaaggc ctggtggccg cggaactgcc ggcggccgcg attacgctcg tgccgacgcg
     1381 ggagcgcgct gccgtcggca tgatgctcgc cgggctcgac ggcgcaatcg acgtgatcgt
     1441 gccgcgcggc gggaagagtc tggtggaccg cgtgcagacc gaagcgcgcg tgccggtatt
     1501 cgcccatctc gaaggcgtct gccacgtcta tgtcgaccgc aaagccaaac tcgccatggc
     1561 caaatcgatc gtgctcaacg ccaagatgcg ccggaccggc gtgtgcgggg cggccgagac
     1621 gctgctcgtc gaccgggcag acgcgccaag attgctcaag ccgctcgtcg ccatgctcct
     1681 cgacgccggg tgcgagatcc gcggcgatgc cgccgtacag gcggtcgatc gccgcgtgaa
     1741 gcccgcgagc gaagccgatt ggggcacgga atacctcgac gccattctga ccgccggggt
     1801 ggtcgacggc gtcgatgggg cgatcgccca tatcgaacgt tacggctcgc atcacaccga
     1861 cgcgatcgtc accgaagacc ggcagagcgc ggagaaattc ttgcgcgagg tcgattcggc
     1921 gatcgtgctg cataacgcat cgacccaatt cgccgacggc ggcgaatttg gttttggcgc
     1981 ggagatcggc atcgccaccg gccggttgca cgcgcgcgga cctgtcggcg tcgagcagct
     2041 tacaagtttc aagtatcgcg tgcacggcag cggacaaacg cggccttgac cgtcgacgtt
     2101 caggccgcgg ctcgcgcaaa gcgggatcgg cggctgcgtg ttggggagga gaactttcgc
     2161 acagccatga actgcgagtt ccccctaccg cgtcaggccg ctcccacggt tcccttcaaa
     2221 ccacgcacgg gaagtcccgt cgtcacgggc acaggccgca ttgtcttgcc gccgcacggg
     2281 cctgggatgc gcatcgggct gttcggcggc accttcgatc cggtccacgc cgcgcaccgc
     2341 gccgcgtgtc tgctggcgat gaaacggctc ggcctcgatc gggtctggtg gctcgtcacg
     2401 cccggcaatc cgcttaagga cacgcgcggc ctcgctccgc tcgccgaacg ggtccacgcc
     2461 gcgcaggtgt tggcgcatca tccgcgcatc gacgtcaccg atctcgaaac gcaactcggc
     2521 acccgctaca cccatcagac gatcgcgtat cttcgccagg gctgcccggg cgtgcgcttc
     2581 gtgtggatca tgggtgccga taatctgcgc agcttccacc gctggcagcg ctggcgcggc
     2641 attgcggcgc tggtgccgat cgccgtggtc gaccggctcg gcccgagcct ttacgccacg
     2701 gccggcatcg ccggccaggc gctcgcctat gcgcgtctac ccgaatcggc ggcaaggacg
     2761 ctgccggaac gaaggccgcc ggcctggctt tacctccatg gcctcaagtc gccgctgtcc
     2821 tctacggcgc tgcgcgcggc acgcgccttg caaagcggtt gaaactctta accgcgcgtg
     2881 cctatcttag tgatgccccg gacttcgaga cgactcgggg ctgtgaagga gcggaaggaa
     2941 agcgaaagga aaaggacccc tgtccacacc tgcaattagt cgggccgaac gtcgcgcgcc
     3001 cgaatcggtc tccagaatgc gtcctgacgc tgaggagatc cttcgtctgg tcctcgcccg
     3061 cctcgacgac atgaaggcgg aggacaccct caccatcgac ctccgtggca aatcttcaat
     3121 cggcgactac atggtcgtgt cttccggccg gtcgcagcgc cacgtcggtt cggtcgccga
     3181 tcgcgtgatc gaggatttgc acaaggtccg cgtcgccgcc cgggtggaag gcgttccgca
     3241 ttgcgattgg gttctgatcg acgcgggtga cgtgatcgtt cacgtcttcc gcccggaagt
     3301 gcgggccttc tacaatctcg agaagatgtg gtcggccaac gggccggtgc agcgcgcgag
     3361 ctgacgcgct cgcgagcaga tgagggtctt ttggggctgg cgccggacgg gccggtgact
     3421 gcgcgtccgc cgctgttcct gcgtgtgttc actcatctca tccgccaagg catctttgcg
     3481 ccatgcgtct cctgatctgc gcgatcggcc gcctgaagca gggtcccgag cgcgagcttg
     3541 ccgcgtggta tcgcaagcgc gccgaagcca tcggacggcc gctgggcctg cgcgcgatcg
     3601 agatcgttga aattcgcgag agccgcgcgc aggacgccga gcggcgccgt atcgaggaat
     3661 cgatcgcgct cgccaatgtc atccccgagg aggggatggc cgtcattctc gaccagcacg
     3721 gcgaaaatct cgatagcgcc gctctcgccg cgctgctgca acgctggcgg gcggataact
     3781 gcccggcggc cgctttcatt atcggcggcg ccgacggcct cgcgccaaac ctggcgcaac
     3841 gcgccaagtt ccggctcgcg ttcggagcag ccacctggcc gcaccagctc gtgcgcatca
     3901 tgctgctcga gcagctctac cgcgccggca ctatcctcgc gggacacccc taccaccgcg
     3961 gctgagtctc acctttctca ttcttaatcc tgcctcaccg atatgtgacg cgtcggtacg
     4021 ggtccgcgtc ttaatgtggt cgcatcgcgc gggctctgtc ttgccttcgc gcccccggcg
     4081 tctacccttg gacacgatga ttctccgtcg gtcgagccgc accgatccgc gccttgtgct
     4141 cggcagcgcc ttggcgtttg ccctgccgct cggcgccaat ccggctgcgc tcgcccagac
     4201 cccacccgcc aaggcgccgg tgcaagcgcc ggtcgcgccg ggtccggtgc cctacctcgc
     4261 cccccagccg gcgctgcccg gatcgccgcc gaccgacgcg gatgctctca agcagcgcga
     4321 tcaggaactc gaggcggcgc gcgccaggga gcgcgagtcg gcggagaacc aggccaagct
     4381 caaacgcgag atcgaggcgc tcggcgacga tcgccgcgcg ctcaaccagc agctcatcga
     4441 taccgccgcg cacgtgcgcg gcgtcgaagc aagcatcgag gcgaccgaag gacgtctcaa
     4501 gccgctcgac gagcaggagc gcctttttca gaaatcgctc gacgaacgcc gcgcggtgat
     4561 catcgagatt ctcgccgccc tgcaacgggt cgggcaccag ccgccgccgg cgctgatggt
     4621 gcggccggag gatgcgctgc aggcggtgcg catggccatc atgctcggcg ccgtgctgcc
     4681 ggagatgcgg gcccaggccg aagcgctcgc cggcgacctc gccgacctcc tgcgggtgcg
     4741 caacgacatt gtcgccgaac gcgaccatct cgcgcgcgat ctcgcccagc ttggtcacga
     4801 ccagctgcgc atgaacatgc tgatcgacga gcgccagtcg aaacagtcaa acgccgagca
     4861 ggcgctcgat agcgaacgcc agcgcgccac cgacctcgcc cgccaggtcg acggcctcaa
     4921 ggacctcatc ggcaagctcg aggccaacct cgacagcgcc aaccgcgccg cccatctcgc
     4981 cgcgcgcgcg gccgaggagg gccggcctga cgttgccgcc ctcaacgatg ccgggcggct
     5041 ggccccggcg gtcgcgttcg ccgccacgcg cggccgcttg ccgttgccgg taaatggagt
     5101 cagaatccgc gacttcggca ccgcggacgg cttcggcgga aaccagaagg gcgtttccat
     5161 cgccacccgc accggcgcgc aaattactgc gccctgcgac ggctgggtgg tttacgcggg
     5221 cgcgtttcgc agctatgggc aactcttgat cctgaatgcc ggcggcggct atcatgtttt
     5281 gctggcgggg atggagcgca tctctgtcga tctcggccag ttcgtgctga caggtgagcc
     5341 ggtggcggta atgggcagcg gatcgcaggt ttccactgcc gcggcggcca agcctaaaca
     5401 acctgtactc tatgtggagt tccgcaagga cggcactccc atcgatcccg gcccctggtg
     5461 ggctactaac gaaggcgaaa aggttcgcgg atgatgcgca aaacttcctt cattttcctc
     5521 ggcatggccg cgggtgtcgg tctgacgttg ctggcgacgc agccccacaa cgtattcacg
     5581 ggctcgagcg cgaaagcggc ggcgtccgac acctaccggc agctcaacct gttcggcgac
     5641 gtgttcgagc gcgtgcgcgc cgattacgtc gaaaagcccg atgacggcaa gctcgtcgaa
     5701 tcggcaatca acggcatgct ggccgggctc gacccgcatt cgagctacat ggacccgaag
     5761 agcttccgcg acatgcaggt gcagacgcgc ggcgaattcg gcggtctcgg catcgaggtc
     5821 accatggagg acgggctcgt caaggtggtg gcgccgatcg acgagacgcc ggcggccaag
     5881 gccggcgtca tggccaacga catcatcacc cacctcgacg acgaggcggt gcagggcctc
     5941 acgctcaacc aggccgtcga gaagatgcgc ggcccggtga acaccaagat caagctcagg
     6001 atcatgcgca agggcggcga caagccgatc gaggtgacga tcgtgcgcga cgtcatccgt
     6061 gtccgctccg tccgctcgca cagcgagggc gaggacatcg gctacatccg catcacccag
     6121 ttcaacgagc agacgaccga cggcctgaaa aaggcgatcg gcgatctttc cagccagctc
     6181 ggttctgaca aggtcaaggg cttcgtcgtt gatctgcgca acaatccggg cggcctgctc
     6241 gaccaggcaa tctcggtgtc ggacgccttc ctcgagaagg gcgagatcgt ctcgacccgc
     6301 ggccgcaatt ccgaggaaac ccagcgcttc aacgcgcggc cgggcgacct gaccaagggc
     6361 aagccggtga tcctcctgat caacggcggt tcggcgtcgg cgtcggaaat cgtcgccggg
     6421 gcgctgcagg accacaagcg cgccacgctg atcggcacgc gctcgttcgg caagggttcg
     6481 gtgcagacga tcatcccgct cggcgccggc aacggtgcgc tccgcctgac cacggcgcgc
     6541 tactacacgc cggcgggacg ctcgatccag gccaagggca tcactcccga tatcgaggtg
     6601 ctgcaggacg tgccggacga cctgaaggcg cggaccgact ccaagggcga ggcctcgctg
     6661 cgcggccacc tcaaggccga gggctccgag gaaaccggct cgcaatccta cgtcccgccg
     6721 gacgagaagg acgacaaggc gctcaaaatg gccctcgacc ttctgcgcgg cgccgtgagc
     6781 gacgcggcct tcccgccgaa tccgaaggcg gcggttccga actgagcgga cacccgatcc
     6841 tctgccgctt gcggcgaagg aaaacagttg gtgcggggcg gcgacgagcc gccccgcttc
     6901 gtttctgcgt cggtacgctg accatgccga gccgttgtga gcttggcggc ttggcggctt
     6961 cgcggtcgtg gtaaaataag gcatgattcg cgacggcctc ccccggcaag actcgatacg
     7021 gctgaaatcg gagcaaaggc tcggcccaag gaccggccga tgaccgcgga tgagttgagc
     7081 gccccgctcg gccaaatgcc gcgcaagcag cggcgcaaat ttccgatcgc ggtgccgaac
     7141 gtgatcgccg gcgcactcgc gcttttcctt ggcacattcg tgctgtggac gatcgtgggc
     7201 gacgatcctt tcggcggcga gccgatggtc accgcgccgg tcgacctgcg cgccgctgcg
     7261 gcggtgaaga aaccggagcc gccggcggca ccggaaaacg ccgccaaccc gcaaggtccg
     7321 caccgctacg acgggccggc gccggcctcg gcgccgccgg agaaaaacgc tccggcaaac
     7381 ccgccgccaa acaccaagac cgtcaccatc atcgacggca agaccggagc acggcaggag
     7441 gtggtgatcc ccgacccggc gggcgccgc
//
LOCUS       DATMQB010000010         5225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3141, whole genome shotgun sequence.
ACCESSION   DATMQB010000010 DATMQB010000000
VERSION     DATMQB010000010.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5225
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3141"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..154
                     /locus_tag="VNY79_00440"
     CDS             <1..154
                     /locus_tag="VNY79_00440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein"
                     /protein_id="HWX70943.1"
                     /translation="TVREYLVSRGVSAQRMRTISYGKERPVALCNDISCWSQNRRVVT
                     VLNQSS"
     gene            359..1363
                     /gene="ybgF"
                     /locus_tag="VNY79_00445"
     CDS             359..1363
                     /gene="ybgF"
                     /locus_tag="VNY79_00445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system protein YbgF"
                     /protein_id="HWX70944.1"
                     /translation="MIRSASLLALAFAWTLGSGVACAQDSASEMLTRLDRLEAAIRQL
                     TGAMEQLQYRNQQLEQQVRRMQEVGEGRSDAPRPPSVAQRPPPVTAAPAVGPAASADP
                     APSQSGRRADVFDPTLNPNAPGAPHTLGSNTPANEPPSLHERPPGADAGGSPPPRTAG
                     APLNLSTLATTQPGGAVPGAGELPPPPPRNSSATGATGALQATLPPGATAKDEYDLAY
                     GYVMHKDYALAADTFRTFLRQYPSDRLAPEAQYWLGESLFQQQQYRDAAESFLAVSTK
                     YETTARAPEALFRLGQSLAALGEKEAACASLGEVLRKYPRASQNVKQSVEREQRRDHC
                     "
     gene            1350..2423
                     /gene="tilS"
                     /locus_tag="VNY79_00450"
     CDS             1350..2423
                     /gene="tilS"
                     /locus_tag="VNY79_00450"
                     /EC_number="6.3.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016879 - ligase activity, forming
                     carbon-nitrogen bonds [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA lysidine(34) synthetase TilS"
                     /protein_id="HWX70945.1"
                     /translation="MTTAEPALRDAEANALFHGLENLPGLVLAVSGGSDSTALLVMAA
                     RWAKQLKKRRPKLLAVTIDHGLRPESAREAATVKRLARRLGVPHRTLAWRGSKPKTGL
                     QETARLARYALLAQAALREGYEHVLTAHTLDDQAETVLFRLARGSGVTGLAGMAYASP
                     LPAGRQDTIFVVRPLLHVAKSRLVATLKAARVTHSEDPSNRDPRFARARLRTVMPALA
                     REGLDARCLARLAARMRRAEATIEFAVVAARAALAPDTWRERGPIVFEAERFSDLPAE
                     VGMRLLGRAIAHTGDEGPVELGKLELLYQALRQSRSRLRRTLAGASITLAGGRLVVER
                     APARRTAPATAALRNSGIDSENT"
     gene            2573..4498
                     /gene="ftsH"
                     /locus_tag="VNY79_00455"
     CDS             2573..4498
                     /gene="ftsH"
                     /locus_tag="VNY79_00455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HWX70946.1"
                     /translation="MNANLRNFALWVIIVLLLLALFTLFQNPGQHTTSQDVSFSQLLN
                     EVDQGRVRDVVIQGPEIHGTFTDGRSFQTYAPSDPSLVQRLYNKGVSITARPQTENVP
                     WFVSLLISWLPFVALIGVWIFLSRQMQGAGGKALGFGKSRAKLLTEAHGRVTFEDVAG
                     VDEAKLDLQEIVEFLRDPGKFQRLGGRIPRGVLLVGPPGTGKTLLARAIAGEANVPFF
                     TISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAVGRHRGAGLGGGNDERE
                     QTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPGRFDRQVVVPNPDVVGREQI
                     LKVHVRKVPLAPDVNLKTIARGTPGFSGADLMNLVNEAALMAARRNKRMVTQVEFEDA
                     KDKVMMGAERKSLVMTEEEKLLTAYHEGGHAIVAINVKATDPVHKATIIPRGRALGMV
                     MQLPERDKLSMSLEQMTARLAIMMGGRVAEELVFGHEKVTSGAASDIEQATKLARMMV
                     TRWGLSDALGTVAYGENQEEVFLGYSVARQQNISEATVQKIDAEIRRLVEAGYQEAQQ
                     ILTDKRADLETLAKGLLEFETLSGDEIKDLLMGKRPSRESVIEPTAPRTSTVPTAGAG
                     RNRPRPEPGPMEPQPQA"
     gene            4495..>5225
                     /locus_tag="VNY79_00460"
     CDS             4495..>5225
                     /locus_tag="VNY79_00460"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HWX70947.1"
                     /translation="MSGCTPGWSKCRHSSGIFFHAAAEGLFVRTISIVATALALTGAQ
                     ALAQVSGQPNLLDPRPAVANPQFAPAKPRATPATPAAPQAAPARPQAATTKAQPAPAK
                     PPSTPESRSAAALALSADPVFDEGTYQRIKEALLSYAAVQVRGGWPSLPADAKLAPGA
                     SGPNVALLRRRLVITEDMPAGHEAGEDYDEAVAEGVRRFQVRHGLEATGSVSAQTLRA
                     LNVPVGARMKQLEASLERLLGMDFV"
BASE COUNT          874 a         1821 c         1715 g          815 t
ORIGIN      
        1 gaccgtgcgc gaatatctcg tctcccgcgg ggtgtcggcc cagcgcatgc gtaccatctc
       61 gtatggcaag gaacggccgg tcgcgctgtg caacgacatt tcctgctggt cgcagaaccg
      121 ccgcgtcgtg acggtcctca accagagctc atagcctgtg ccattggcgg ggcggaacag
      181 gtagaggcca aagctccgcc ggattgctga tgcttgggtc ctgcgcgcct tgcacccggc
      241 gtttgccgtg acgcgctgcg ggctgaccac atggcccaat tgcggcccgc tagtcacaat
      301 ttggacgtag gacgggctat gttaaggatc gcccacccag cgaaaaatgt cgcccgtgat
      361 gatccgttct gcatccctgc tcgcactcgc ctttgcctgg acgctcggtt ccggcgtcgc
      421 ctgcgcgcag gattcggctt ccgagatgtt gacgcgcctc gatcggctcg aggcagcgat
      481 ccgccagctc accggcgcga tggagcagct gcaataccgc aaccagcagc tcgagcagca
      541 ggtgcggcgc atgcaagaag tgggcgaggg ccgttccgac gcgccgcggc cgccgtccgt
      601 ggcgcaacgg ccgccacccg taacggcggc cccagcagtc ggaccggcag catcagcaga
      661 cccggcgcct tcgcagtcgg gacgccgcgc cgatgtcttt gacccgacgc tcaatcccaa
      721 tgcgccaggc gcgccgcaca ccctcggctc aaacaccccc gcgaatgagc cgccgtcgct
      781 ccacgagcgg cctcctggcg cggatgccgg cggcagcccg ccaccgcgca cggccggtgc
      841 gccgctcaat ctctcgacgc tcgccacgac gcaaccgggc ggagcggtgc cgggagcagg
      901 cgagttgccg cccccgccgc cgcgcaattc gagcgccacg ggcgccacag gcgccctgca
      961 ggcgaccctg ccgccgggcg ccacggcgaa ggacgagtac gacctcgcct atggctatgt
     1021 gatgcacaag gactacgcgc tcgccgcgga cacgttccgc accttcctgc gccaatatcc
     1081 gagcgaccgg ctggcgccgg aggcgcaata ctggctgggc gagagtcttt tccagcagca
     1141 gcaatatcgc gacgccgccg aatcattcct cgccgtttcg accaaatacg agacgaccgc
     1201 gcgcgcgccc gaagcgctgt tccggctcgg ccagtcgctc gcggctctgg gtgaaaaaga
     1261 agcggcttgc gcctcgctcg gcgaagtcct gcgcaaatat ccgcgcgcct cgcagaacgt
     1321 aaagcaaagc gtggagcggg aacaaaggcg tgaccactgc tgaaccggcg cttcgcgacg
     1381 cggaagcgaa tgcgctgttc cacggtcttg aaaatctgcc cgggcttgtg ctcgcggttt
     1441 ccggcggctc cgattcgacg gcgcttctgg tcatggccgc gcgctgggcg aagcagctga
     1501 aaaaacgccg cccaaagctt ctcgccgtca ccatcgatca tgggctgcgg ccagagtcgg
     1561 cgcgcgaagc ggccacggtg aagcgtcttg cgcgccggct tggcgtgccc catcgcacgc
     1621 tcgcctggcg cggcagcaaa ccaaagaccg gattgcagga aaccgcgcgc ctcgcgcgtt
     1681 acgctttgct ggcgcaagcg gcactgcgcg agggttatga gcacgttctg accgcccata
     1741 cgctcgacga tcaggcggaa acggtcctgt tccgcctcgc tcgcggcagc ggcgtcaccg
     1801 ggctcgctgg gatggcgtat gcatcgccgc ttcccgccgg ccggcaagac acgatctttg
     1861 ttgttcgacc gctcttgcat gtcgccaaga gccggctcgt cgcgacactc aaggccgcgc
     1921 gtgtcactca cagcgaggat cccagcaacc gcgatccgcg ctttgcccgg gcgcggttgc
     1981 gcacggtcat gccggcgctg gcgcgcgaag gactcgacgc gcgctgcctg gcgcggctcg
     2041 ctgcccgcat gcggcgcgcc gaggccacga tcgaattcgc cgtcgtcgcc gcgcgcgccg
     2101 cgttggcgcc ggacacgtgg cgcgagcgcg gcccgatcgt tttcgaagcg gagcggttca
     2161 gcgacctgcc tgcggaggtc gggatgcgcc tgctcggtcg cgcgatcgcg cacaccggtg
     2221 acgaagggcc ggtcgaactc ggcaagctcg aactgcttta ccaggcgctg cggcagtcgc
     2281 gctcgcgtct gcgccgcacc ttggccggcg cgtcgatcac gctcgccggc ggccggctgg
     2341 tggtcgaacg cgctccggcg cgccgcacgg cgccggcaac agccgcttta cgaaatagcg
     2401 gtattgatag cgagaatacg tagcctacca ccgctggtcc gccgggccct tctcttggca
     2461 ggccaccgtg tggcgcctac attcctgtag actgggacgt gaagccgcca cgatccgcgg
     2521 ccaccaatgc aagccgtcgg gggtccggcg gatcgccggg caaggacacg cgatgaatgc
     2581 caatctgcgc aatttcgccc tgtgggtcat cattgtcctg ctgctcctgg cgctgttcac
     2641 tctgttccag aatcccggcc agcacacgac ttcgcaggac gtatctttct cacagctgct
     2701 taacgaggtc gatcagggcc gcgtgcgcga cgtcgtcatc cagggcccgg agatccacgg
     2761 cactttcacc gacggccgca gcttccagac ctatgcgccg agcgatccga gcctggtgca
     2821 gcgcctctac aacaagggcg tttcgatcac cgcacggccg cagaccgaga acgtgccgtg
     2881 gttcgtctcg ctgctgatct cgtggttgcc gttcgtggcg ctgatcggtg tctggatctt
     2941 tctctcgcgg cagatgcagg gtgccggcgg caaggcgctc ggcttcggca agtcgcgggc
     3001 gaagcttttg accgaggcgc acgggcgcgt cacctttgag gacgtggccg gcgtcgacga
     3061 ggccaagctc gacctgcagg aaatcgtcga attcctgcgc gatcccggga aattccagcg
     3121 gctcggcggc cgcatcccgc gcggcgtgct gctggtcggc ccgcccggca ccggcaagac
     3181 cttgcttgcc cgcgccatcg ccggcgaggc gaacgtgccg ttcttcacca tttccggctc
     3241 cgacttcgtc gagatgttcg tcggcgtcgg cgcgagccgc gtgcgcgaca tgttcgagca
     3301 ggcgaagaag aacgcgccct gcatcatctt catcgacgag atcgacgcgg tcggccgcca
     3361 ccgcggcgcc ggcctcggcg gcggcaatga cgagcgcgag cagacgctga accagctgct
     3421 cgtcgagatg gacggctttg aggccaacga aggcatcatc ctgatcgccg ccaccaaccg
     3481 tccggacgtg ctcgacccgg cgctcctgcg tcccggccgt ttcgaccggc aggtggtcgt
     3541 gcccaatccg gacgtagtcg gccgcgagca gattttgaag gtgcacgtgc gcaaggtgcc
     3601 gctggcgccg gacgtcaatc tgaaaaccat cgcccgcggc acgcccggct tctccggcgc
     3661 cgatctcatg aacctcgtca acgaggcggc gctgatggcg gcgcggcgca acaagcgcat
     3721 ggtcacccag gtcgagttcg aggacgccaa ggacaaggtg atgatgggcg ccgaacgcaa
     3781 gtcgctggtg atgaccgagg aggagaagct cctcaccgcc tatcacgagg gcggccacgc
     3841 catcgtcgcg atcaacgtca aggcgaccga tccggtgcac aaggcgacta tcatcccgcg
     3901 cggccgcgcg ctcggcatgg tcatgcagct gccggagcgt gacaagttgt cgatgagtct
     3961 cgagcagatg accgcccggc ttgcgatcat gatgggcggc cgcgtggcgg aggaacttgt
     4021 gttcggtcac gagaaggtga cctccggcgc cgcctccgac atcgaacagg cgaccaaact
     4081 tgcgcgcatg atggtgacgc gctggggcct ctccgacgcc ctcggcaccg tcgcttatgg
     4141 cgagaaccag gaggaagtgt tcctcggcta ttcggtggcg cgccagcaga acatttccga
     4201 ggcgaccgtg cagaagatcg acgctgagat caggcggctg gtcgaggccg gttatcagga
     4261 agcgcagcag attctcacgg acaaacgcgc cgatctggaa acgctcgcca agggcctgct
     4321 cgagttcgag accttgagcg gcgacgagat caaggacctg ctcatgggta agcgtccgag
     4381 ccgtgaatcg gtgatcgagc cgacggcgcc gcgcacctcg acggtgccga ccgccggcgc
     4441 cggccgcaac cgcccacgcc ccgagcccgg cccgatggag ccgcagccgc aggcatgagc
     4501 ggctgcacgc cgggctggtc caaatgccgc cacagcagcg gcatattttt tcatgcggcg
     4561 gctgaggggc tattcgtgcg gaccatctcg attgttgcaa cggctctcgc tctgacaggg
     4621 gcgcaggcac tcgcgcaggt cagcgggcag ccgaatctgc tcgatccgcg cccggcagtc
     4681 gccaatcccc agttcgctcc cgccaagccg cgcgcaacgc ccgccacccc tgccgcgccc
     4741 caggccgctc ccgccaggcc gcaagccgca acgactaaag cccagccggc gcccgcaaag
     4801 cccccttcga cgccggagtc gcgctcggcc gcggcattgg cgctgtctgc cgaccccgtg
     4861 ttcgacgagg gcacctacca gcgcatcaag gaggcgctgc tcagctacgc ggcagtccag
     4921 gtacgcggcg gctggccgag cttgcccgcc gatgccaagc tcgcgccggg cgcaagcggg
     4981 cccaacgtcg ccctgctgcg ccggcgtctt gtcatcaccg aagacatgcc cgccgggcac
     5041 gaagccggcg aagactatga cgaagcagtg gccgaaggcg tgaggcgctt tcaggtgcgc
     5101 cacggcctcg aggcgaccgg cagcgtcagc gcccagacgc tccgcgccct caacgtcccc
     5161 gtcggcgcgc gcatgaagca gctcgaagcc tcgctcgaac gcttgctcgg catggatttc
     5221 gtgtt
//
LOCUS       DATMQB010000011         2146 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_623383, whole genome shotgun sequence.
ACCESSION   DATMQB010000011 DATMQB010000000
VERSION     DATMQB010000011.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2146)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2146)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2146
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_623383"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            3..941
                     /locus_tag="VNY79_00465"
     CDS             3..941
                     /locus_tag="VNY79_00465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX70948.1"
                     /translation="MGAAALAVLALLPLVFPSKALIDFMIRGSALALFATSLNFLVGY
                     GGMVSFGHGMFYGLGAYSFALLMQRTGMPIPAAFVLALAMCAALGLVVGAICVRLKEI
                     YFAFLTLAFQMLVHSVIILWVPLTGGDQGLRGGIPRPPFLGINLANQMHLYLTSCTLL
                     VVGLVMMHHLVQSPFGYTLRMIRDNAARTNFLGVGVFRVRLIAFVLAGVFAGMGGVIM
                     SLFVSGAYPEFAYWTVSGEGIFAIMLGGLNSFLGPAVGTVILLVLNDFVTRVTEYYGL
                     TLGVVILLFALGLRRGVLDVLVDLWHRRSTFAKVKA"
     gene            938..1723
                     /locus_tag="VNY79_00470"
     CDS             938..1723
                     /locus_tag="VNY79_00470"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX70949.1"
                     /translation="MSGRRIGGIAVVTGGASGIGAACCRVLADAAATVVVLDRDEARA
                     HAIAAEVKGRAWVADVGDEKALDECAGAIEAAVGPVDVLVNSAGVLQQPLPPEQLPMS
                     SWDEVIHIDQRGTYVASVAFGRRMAQRGRGSIINIASIAGMRSMPMHAYAPAKAAVIA
                     ITECLAAEWGRSGVRVNAVSPGYTLTPALQAAIDKGQRDVSMLNENSALGRMVSPEEV
                     ARAVCFLASEDASAITGANLPVDCGWLVTPSWHTYGGLRPARR"
     gene            1730..>2146
                     /locus_tag="VNY79_00475"
     CDS             1730..>2146
                     /locus_tag="VNY79_00475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HWX70950.1"
                     /translation="MLAVEGLSKSFGGVAAIQDVSLKFAPGSLTAIIGPNGAGKTTFF
                     NLISGAIRPDKGRVTLSGEDIVGLPPAQIARRGIARSFQIASIFPSLTVEAILTATVQ
                     AHLRQAERIMRRFPLPECRDRAFAAMDMLGLADKAAV"
BASE COUNT          297 a          720 c          715 g          414 t
ORIGIN      
        1 tgatcggcgc cgccgcgctc gccgtgctgg ccttgctgcc gctcgtcttt cccagcaagg
       61 cgctgatcga tttcatgatc cgcggctccg cgctcgctct gttcgccact tcgctgaatt
      121 ttctggtcgg ctacggcggc atggtctcgt tcggccacgg catgttctac gggctcggcg
      181 cctactcatt cgcgctgctc atgcagcgca ccggcatgcc gattccggcc gccttcgtcc
      241 ttgcgctcgc gatgtgcgcc gccttggggc tcgtggtcgg cgctatctgc gttcggctca
      301 aggaaatcta ttttgccttt ctcacgctcg cctttcagat gctggtgcac agcgtgatca
      361 tcctatgggt gccgctgacc ggcggcgacc aggggctgcg cggcggcatc ccgcggccgc
      421 cctttctcgg cattaatctc gccaaccaga tgcacctgta cttgacgagt tgcacgctgc
      481 tcgtcgtcgg cctggtgatg atgcatcacc tcgtgcagtc gccgttcggc tacacgctgc
      541 ggatgatccg cgataacgcc gcgcggacga attttctcgg cgtcggggtg tttcgcgtcc
      601 ggctgatcgc tttcgtcctt gccggcgtgt tcgccggcat gggcggggtc atcatgagcc
      661 tgttcgtctc cggcgcctat ccggaatttg cctactggac cgtatcgggc gaaggcatat
      721 tcgccatcat gctcggcggg ttgaacagct ttctcggccc ggcggtggga acggtgatcc
      781 ttctcgtcct caacgacttc gtgacgcggg tgaccgagta ctacggcctc accctcggcg
      841 tcgtcattct tctgttcgcg ctcggactgc ggcgcggcgt gctggacgtg ctggtcgatc
      901 tctggcacag acgctcgact ttcgcgaagg tcaaggcatg agcggacgac gcatcggagg
      961 cattgccgtg gtgaccggcg gggcaagcgg catcggcgcc gcgtgctgcc gcgtgctggc
     1021 ggacgcggca gcgacggtcg tcgtgctcga tcgcgacgag gcgcgggcgc acgcgatcgc
     1081 cgccgaagtc aagggcagag cgtgggttgc cgacgtcggc gacgagaagg cgctcgacga
     1141 atgcgccggc gccatcgaag cggccgtcgg tccggtcgac gtcctggtca acagcgccgg
     1201 cgtgctgcaa cagccgctgc ccccggaaca actgccgatg tcgtcgtggg acgaggtcat
     1261 ccacatcgat cagcgcggca cctacgtggc ttcggtcgcg ttcggccggc gcatggcgca
     1321 gcgcggacgc ggcagcatca tcaacatcgc ctcgattgcc ggcatgcgtt cgatgccgat
     1381 gcacgcctac gcgccggcca aggcggcagt catcgccatc accgagtgcc ttgccgcaga
     1441 atggggacgc tccggcgtgc gggtcaatgc agtgtcgccg ggctatacgc tcacgcccgc
     1501 cctgcaggcc gcgatcgaca agggccagcg cgacgtctcc atgctcaacg agaactcggc
     1561 gctcggccgc atggtgagcc cggaggaagt cgcgcgcgcc gtctgtttcc tggcaagcga
     1621 ggatgcttcc gccatcaccg gcgccaacct gccggtggac tgcggctggc tggtcacgcc
     1681 gtcttggcat acctacggcg ggctgcgccc ggcgcgcagg tgacggtgca tgcttgcggt
     1741 cgagggactg tcgaagtcct ttggcggcgt cgccgcaatc caggatgtct cgctcaagtt
     1801 tgcgccgggc tcgctcacgg cgatcatcgg gccgaacggc gccggcaaga ccaccttctt
     1861 caaccttatt tccggggcga tccggcccga taagggccgc gtgacgctct cgggcgagga
     1921 catcgtcgga ctgccgccgg cgcagatcgc aaggcgcggt atcgcgcgct cgttccagat
     1981 cgcctcaatc tttccgtcgc tgaccgtcga ggcgatcctc accgcgacgg tgcaggcgca
     2041 cctgcggcag gcggagcgga tcatgcgccg tttcccgctg ccggaatgcc gcgaccgcgc
     2101 cttcgcggcg atggacatgc tcgggctcgc cgacaaggcg gcggtc
//
LOCUS       DATMQB010000012         6309 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3399, whole genome shotgun sequence.
ACCESSION   DATMQB010000012 DATMQB010000000
VERSION     DATMQB010000012.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6309)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6309)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6309
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3399"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..108
                     /locus_tag="VNY79_00480"
     CDS             <1..108
                     /locus_tag="VNY79_00480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009030982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX70951.1"
                     /translation="GEPSDLAGPLLFLASKASDFYTGHILYADGGYTAG"
     gene            111..1025
                     /locus_tag="VNY79_00485"
     CDS             111..1025
                     /locus_tag="VNY79_00485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006938830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-CoA dehydrogenase family protein"
                     /protein_id="HWX70952.1"
                     /translation="MAKDPTNARIAVVGAGLMCHGIAQVFALAGHEVTITDVDAASLD
                     TAPSRIAANLHELGEDGGAVARLRPCATLAETVRDADYVVEAVSENLPLKQKLFAEIE
                     RHVRSDAILASNTSVIPITSIMQGLAGRERALGTHWWNPPYLVPLVEVIETQWTSPQA
                     VDWTMALHRAAGKQPAHVKKDVPGFIGNRLQHALWREAVALVEHGVCDAETVDAVIKA
                     SFGRRLPVLGPLENADLVGTDLTLAIHDIVLPAIDSRPGPSPYLRRLVADGKLGFKSG
                     EGFRKWSPGQQAALRAKLTQHLKSMQSP"
     gene            1040..2344
                     /locus_tag="VNY79_00490"
     CDS             1040..2344
                     /locus_tag="VNY79_00490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006938831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX70953.1"
                     /translation="MSDNANIANKSAARAGIDRRTVIAGGVGALAAPAVLRVIPANAQ
                     SKTIKIGHVSPKTGPLAGFGESDGFIIDQMNKILKPGLQSGGNTYQVQIISKDSQSSG
                     TRAAEVAAELITRDKVDLIVASSAPDTTNPVADQAEVNEVPCVTTNCPWQPYFFGRNG
                     DPKKGFTWTYHFFWGLEDVIASYLPIWDGAPTNKIMRGLFPIDADGNAWGDPQRGLPP
                     ALTKAGYKLIDPGRYQVMNNDFTSQISAFKSAGAEIVVGNMIPPDFATFWSQAAQQNF
                     HPKIVTIGKALLFPSVVASLGPRGNGLTTEIWWTPTFPFKSGLTGQNARELTDAYIDA
                     TKRPWTQPIGYQHALFEVAIDVLNRAKSIDPKAILDAIVATDYHSMVGPVKWTGQPVK
                     DVTKTPLVAGQWQRKGSEFDLVITENASAPEIPVGGKLELLS"
     gene            2427..3158
                     /locus_tag="VNY79_00495"
     CDS             2427..3158
                     /locus_tag="VNY79_00495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018448887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX70954.1"
                     /translation="MNAPILALDKVSKRFGAIIVAEEIDLTLAEGESLGIIGPNGAGK
                     TTLFGIVSGTVAPDTGRVLYAGRDITQASPAQRCTMGIGRSFQIPLPFAGMSVFENLV
                     VAAAFGAGHRERDVYDGCMDILERCGLADKANRRSGSLTLIDRKRLELARALATSPRV
                     LLLDEVAGGLTERECHALIDLIADIRRGGVSIVWIEHVVHALLASIDRLLVLHNGAFI
                     AEGDPHAVIRSPVVSEIYMGMETDV"
     gene            3151..3858
                     /locus_tag="VNY79_00500"
     CDS             3151..3858
                     /locus_tag="VNY79_00500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006938833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX70955.1"
                     /translation="MSEPPLLAVRHLDAFYGDFQALFDLSVDVQAGEAVAVVGANGAG
                     KSTLLSSIAGLIRTRRDAVTFDGATIGGTPAHTIAARGIALVPEGRALFPSLTVEENL
                     LIGGQLKRPGYWNLRRVHELFPMLAERAHVPSTTLSGGQQQMAAIGRGLMSNPKLLLC
                     DEISLGLAPIVVRDIYARLPMILAQGTSLMLVEQDVVQALKATQRVYCLQEGRVALAG
                     AAKDLTREAIAAAYFGV"
     gene            3919..4785
                     /locus_tag="VNY79_00505"
     CDS             3919..4785
                     /locus_tag="VNY79_00505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003554581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX70956.1"
                     /translation="MDWINVILQGVLVGGLYAMFAAGLSLIFGVMRLVNIAHGDLIVL
                     AAYVALVTTETLGVGPLTSLALVVPLMAVIGYALQRLVLNRTLGEDLLPPLLVTFGLS
                     VIIQNGLLAVFTADSRKLQAGDIEVATIRVFEGVYVGLLPLLQFAIAVAVIAALQFVF
                     YRTALGRAFRATADSQSVAQLMGLDNRHVFALAMALSLAVVAIAGVFLAVRANFDPAI
                     GPARLIFGFEAVIIGGLGSLWGTLAGGVVLGVAQAIGAHINPGWQLLAGHMAFLVILA
                     VRPEGLFPRART"
     gene            4782..5819
                     /locus_tag="VNY79_00510"
     CDS             4782..5819
                     /locus_tag="VNY79_00510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018701092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX70957.1"
                     /translation="MSVRVAFASRSSQIGMGLCAAALVALAVAPLWGGRDDLQLLSEV
                     YTYVALASLWNLLAGYAGLVSVGQQAYVGLGAYILFAFAILAGLSPLWAIPLAGIIAA
                     IVAMPVAGLVLRLRGHYFAIGTWIIAEVFRLLASQVSVLGGGSGISLPASLVIAIASS
                     RQWRDFIEYWIALALVVAVLALIVLLLRSRYGLALKAIRDSELAAACNGIDVLRTKVL
                     VYIITAAATAMVGAFIFLQRLRISPDAAFSVNDWTAFVIFITVIGGIGRIEGPIVGTI
                     VFFALRQTLADLGTIYLLTLGVVAILVMLMAPKGIWGLIVESFGWQVFPLERSVILRD
                     RRRVSEQRSGG"
     gene            complement(5885..>6309)
                     /locus_tag="VNY79_00515"
     CDS             complement(5885..>6309)
                     /locus_tag="VNY79_00515"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663030.1"
                     /note="acts in conjunction with GvcH to form
                     H-protein-S-aminomethyldihydrolipoyllysine from glycine;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="glycine dehydrogenase
                     (aminomethyl-transferring)"
                     /protein_id="HWX70958.1"
                     /translation="VAVDDVAKRLIDYGFHAPTMSFPVAGTLMIEPTESESKAEIDRF
                     CDAMIAIRQEIREIETGRMPKNDNPLKNAPHTALDLVDEEWKRPYPRALGCFPAGLNG
                     DKYWPPVNRIDNAYGDRHLVCTCMAPALQDDEIAEKES"
BASE COUNT         1018 a         2109 c         2012 g         1170 t
ORIGIN      
        1 ggcgagccgt cggacctcgc cggtccgctg ctgttcctcg cttcgaaggc gtccgatttc
       61 tacaccggcc atatcctcta cgccgacggc ggctacacgg caggctgagc atggccaagg
      121 atccaacgaa tgcacgcatc gccgtcgtcg gcgccggcct catgtgccac ggcatcgccc
      181 aggttttcgc gctcgccggc cacgaggtga cgatcacgga cgtggacgcg gctagcctcg
      241 acaccgcccc atcacgcatc gccgccaacc tgcacgaact cggcgaagat gggggcgcgg
      301 tcgcccgcct acggccgtgc gccacgctcg ccgaaacggt gcgcgacgcc gactacgtgg
      361 tcgaggcggt gtccgagaat ctgccgctga agcagaagct ctttgccgag atcgaacgcc
      421 atgtacgcag cgatgccatt ctcgccagca atacgtcggt aatcccgatt acctcgatca
      481 tgcagggcct cgccgggcgc gagcgcgcgc tcggcaccca ttggtggaat ccgccgtatc
      541 tggtgccgct ggtggaagtg atcgagacgc aatggacctc gccccaggcg gtggattgga
      601 ccatggcgct gcacagagcg gcgggcaagc agcccgcgca tgtgaaaaag gacgtgcccg
      661 gtttcatcgg caatcggctg cagcacgcgc tctggcgcga agccgtggcg ctggtcgagc
      721 atggtgtctg cgatgccgaa acggtcgatg cggtcatcaa ggcctcgttc ggccgccggc
      781 tccccgtact cggcccgctc gagaatgccg acctggtcgg caccgacctc acgctcgcca
      841 tccacgacat cgtgctgccg gccatcgaca gccggcccgg gccgtcgccc tatctgcgaa
      901 ggctcgtggc tgacggaaag ctcggtttca aatccggcga aggcttccgc aaatggagcc
      961 ccggtcaaca ggcggcgttg cgcgccaagc tgacgcagca tctcaaatcc atgcagagtc
     1021 cctgaaaggg aggatctcca tgagtgacaa tgcgaatatc gcaaataagt ccgccgcccg
     1081 cgccggcatt gaccgccgca cggtgatcgc gggcggcgtc ggcgcgctcg cggcgcccgc
     1141 cgtcctgcgc gtgatccccg ccaacgcgca gtcgaagacg atcaagatcg ggcacgtcag
     1201 cccaaagacc gggccgctcg ccggtttcgg cgagagcgat gggttcataa tcgaccagat
     1261 gaacaagatc cttaaaccgg ggctgcagag cggcggcaac acctatcagg tgcagatcat
     1321 cagcaaagac agtcagtcaa gcggcacgcg cgccgcggaa gtcgccgccg agctgatcac
     1381 gcgcgacaag gtcgatctca tcgtcgcgtc gtccgcgccc gacaccacca acccggtcgc
     1441 cgaccaggcc gaggtgaacg aggtcccctg cgtcaccacg aactgcccgt ggcaacctta
     1501 tttcttcggc cgcaacggcg atcccaagaa aggcttcacc tggacctatc atttcttctg
     1561 gggcctggag gacgtgatcg cctcgtatct gccgatctgg gacggggcgc cgaccaacaa
     1621 aatcatgcgc ggactttttc ccattgacgc cgacggcaac gcctggggcg atccgcaacg
     1681 cgggctgccg ccggcgctca ccaaggccgg ctacaagctc atcgatcccg gccgctacca
     1741 ggtgatgaac aacgacttca cctcgcagat ttcggcgttc aagagcgccg gcgccgagat
     1801 cgtcgtcggc aacatgatcc cgccggactt cgctaccttc tggtcgcagg cggcgcagca
     1861 gaatttccat cccaagatcg tgaccatcgg caaggcgctg ctgtttcctt ccgtggtcgc
     1921 ctcgctcggc ccgcgcggca acggcctgac caccgagatc tggtggacgc cgacgtttcc
     1981 gttcaagtcc ggcctgaccg gccagaacgc gcgggaactc accgatgcct acatcgacgc
     2041 gacgaagcgg ccgtggacgc agccgatcgg ctaccagcac gcgctgttcg aggtggcgat
     2101 cgatgtcctc aaccgcgcca agagcatcga tccgaaggcg attctcgacg ccatcgtcgc
     2161 gaccgactat cactcgatgg tcggcccggt gaagtggacc ggccagccgg tcaaggacgt
     2221 caccaaaacg ccgctcgtcg ccggccagtg gcagcgtaaa ggcagcgagt tcgacctggt
     2281 gatcacggag aacgcgtcgg cgccggaaat cccggttggc ggcaagcttg aactcctgtc
     2341 gtagcgtctc ttagctcgtc cggtcccttc ccgggcaggg agggacccgc agtgttgcct
     2401 gaccgatatg ccgcggcgtg atggcgatga atgcaccgat cctggcgttg gataaggtct
     2461 ccaagcgctt cggagcgatc atcgtcgcgg aagagatcga cctgacgctc gcggaaggcg
     2521 agtcgctcgg catcatcggg ccgaatggcg ccggcaagac cacgctgttc ggcatcgtca
     2581 gcggcaccgt ggcgccggat accggccgcg tgctttatgc aggccgcgac atcacccagg
     2641 cttctcccgc gcagcgctgc accatgggta tcggccgctc gttccagata cccttgccct
     2701 tcgccggcat gagcgtattc gaaaatctcg tcgttgccgc cgccttcggc gccgggcacc
     2761 gcgagcgcga cgtgtacgac ggctgcatgg atatcctcga acgttgcggg ctcgccgaca
     2821 aggccaaccg tcggtccggc agccttacgc tgatcgaccg caagcggctc gaactcgccc
     2881 gtgcgcttgc cacaagtccg cgcgtactcc tgctcgacga agtcgccggc ggtctgaccg
     2941 agcgcgagtg ccacgccctg atcgacctca tcgccgacat caggcgcggc ggcgtatcga
     3001 tcgtgtggat cgagcacgtc gtgcatgccc tgctcgccag catcgatcgc ctcttggtgc
     3061 tgcacaacgg cgccttcatc gccgagggcg atccgcacgc cgtcatccgc agcccggtgg
     3121 tttccgagat ctacatggga atggaaaccg atgtctgagc cgccgctcct cgccgtgcgg
     3181 catctcgatg cgttctacgg cgatttccag gcgctgttcg atctgtcggt ggacgttcag
     3241 gcaggcgagg cggtagcagt cgtcggcgcc aacggcgccg gcaagagcac gctcttgagc
     3301 agcattgccg gcctgatccg cacccggcgc gacgcagtca cgttcgacgg cgccaccatc
     3361 ggcgggacgc cggcccacac cattgccgcg cgcggtatcg cgctcgtgcc cgaaggcaga
     3421 gcgctctttc cctcgctgac ggtggaagaa aatctcctga tcggcggcca gctgaagcgc
     3481 cccggctact ggaatctgcg tcgcgtccac gagctctttc ccatgctggc cgagcgggca
     3541 catgtgccga gcacgacgct gtccggcggg cagcagcaga tggctgcgat cgggcgcggc
     3601 ctgatgtcca atccgaaatt gctgctgtgc gacgagatca gccttggcct ggcgccgatc
     3661 gtggtgcgcg acatctacgc tcggctgccg atgatcctcg cgcaaggcac ctcgctgatg
     3721 ctcgtcgagc aggacgtggt gcaggcgctc aaggcgacac agcgtgtcta ctgcctgcag
     3781 gagggacgcg tcgcgctcgc gggcgcggcg aaggatttga ccagagaggc gattgccgcc
     3841 gcctatttcg gagtatgaac tttcctccgc gtgcggcgag ccgattgggg attggagcgg
     3901 gaccgtgaag cgccgatgat cgactggatc aacgtcatcc tgcagggcgt gctcgtcggc
     3961 ggcctctacg ccatgtttgc cgccgggctg tcgctcatct tcggcgtcat gcggctcgtg
     4021 aacatcgcgc atggcgacct catcgtgctc gcggcctatg tggctctggt caccaccgag
     4081 acgctgggcg tcggccccct gacctcgctc gctctcgtcg tgccgctgat ggccgtgatc
     4141 ggctacgcat tgcagcggct ggtgctcaat cgcacgctgg gcgaagactt gctgccgccg
     4201 ctcctggtca ctttcggcct gtcggtgatc atccagaatg gactattggc ggtcttcacc
     4261 gccgacagcc gcaagctgca ggccggcgac atcgaggtgg cgacaatccg ggtgttcgag
     4321 ggggtctatg tcgggctgct gccgctgctt cagtttgcca tcgccgttgc ggtgatcgca
     4381 gcgctgcagt tcgttttcta tcgcaccgcg ctgggccgcg cctttcgcgc caccgccgac
     4441 agccagtcgg tcgcccaact catgggcctc gacaatcgcc acgtgttcgc gctcgccatg
     4501 gcgctatcgc tggcggtagt ggcgatcgcc ggcgtgttcc tcgcggtacg cgccaacttc
     4561 gatccggcga tcgggccggc gcgcctgatc ttcggtttcg aggcggtgat catcggcggc
     4621 ctgggcagtt tgtgggggac attggccggc ggagtggtcc tcggcgtcgc ccaagcaata
     4681 ggcgcccaca tcaatccggg ctggcagctt cttgccggcc acatggcctt tctggtcatt
     4741 ctcgcggtgc gccccgaggg actgttcccg agggcgcgca cgtgagcgta cgcgtcgcgt
     4801 tcgccagccg atcgagccaa atcggcatgg gattgtgcgc ggcggccttg gttgctctcg
     4861 cggtggcgcc gttgtggggc ggccgcgacg acctgcaact tctctccgag gtctacactt
     4921 atgtggcgct ggcgagcctt tggaatttgc tcgccggcta cgctggcctc gtctcggtcg
     4981 gccagcaggc ctatgtcggt ctcggcgcct acatcctgtt cgcgttcgcc atccttgccg
     5041 gcctatcgcc gctctgggcc atcccgcttg ccggcatcat cgccgccatc gtggcgatgc
     5101 ccgtcgccgg cctggtgtta aggctgcgcg gccactactt cgcaatcggc acctggatca
     5161 tcgccgaggt attccgcctg ctcgcctcgc aggtgtccgt tctgggcggc ggctccggca
     5221 taagcctccc cgcctcgctg gtgatcgcga ttgcctcgag ccggcagtgg cgcgacttca
     5281 tcgaatactg gatcgcgctc gcgctcgtcg tcgcggtgct ggctctgatc gtgctgctcc
     5341 tgcgctcgcg ctacggcctg gcgctcaaag cgatccgcga cagcgagctc gctgcggcgt
     5401 gcaacggcat cgacgtgctg cgcaccaagg tgctggtcta tatcatcacg gcagccgcca
     5461 ccgcaatggt cggcgccttc atcttcctgc agcggctgcg catctcgccc gacgccgcgt
     5521 tcagcgtcaa cgactggacg gcgttcgtga tcttcatcac ggtgatcggc ggcatcggac
     5581 gcatcgaggg accgattgtc ggcaccatcg tcttcttcgc gctgcggcag acgctggccg
     5641 atctgggcac aatctatctg ctgacgctcg gcgtggtggc aatcctggtc atgctgatgg
     5701 cgccgaaagg catttggggg ctcatcgtcg agagtttcgg ctggcaggtg tttccgctcg
     5761 agcgcagcgt catcctccgc gatcgtcgcc gcgtctcgga gcaaagatcc ggcggctgag
     5821 aagtggacgg cggaccttcg ttttgccgcg cgttttgctg cagcaggggc aatcgccggc
     5881 aaggtcatga ttctttttcg gcgatttcgt cgtcttggag cgcaggtgcc atgcaagtgc
     5941 aaaccaggtg acggtcaccg taggcattgt cgatgcggtt gaccgggggc cagtacttgt
     6001 caccgttcag tcccgccgga aagcagccga gcgcccgcgg atacggccgt ttccactcct
     6061 cgtcgacaag atcgagcgcc gtgtgcggcg cgttcttgag cggattgtcg ttctttggca
     6121 tgcgccccgt ttcgatctcc cggatctctt gccggatcgc gatcatggca tcgcagaagc
     6181 ggtcgatttc cgctttcgac tccgactccg tcggctcgat catcagagtg ccggccactg
     6241 gaaagctcat cgtcggcgca tggaagccgt agtcgatcag gcgctttgcc acgtcgtcga
     6301 cggcgacgc
//
LOCUS       DATMQB010000013         2760 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1243406, whole genome shotgun sequence.
ACCESSION   DATMQB010000013 DATMQB010000000
VERSION     DATMQB010000013.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2760)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2760)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2760
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1243406"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /locus_tag="VNY79_00520"
     CDS             <1..414
                     /locus_tag="VNY79_00520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX70959.1"
                     /translation="TNLGSLFNMCRPAIEGMRARKFGRIINISSINGQKGQMGQANYS
                     AAKAGEIGFTKALAQESAKSGITVNAICPGYIATDMVKAMPKDVLEKNILPLVPLGRL
                     GEPEEVARCVIFLASDDASFITGSTLTANGGQYMV"
     gene            complement(425..877)
                     /locus_tag="VNY79_00525"
     CDS             complement(425..877)
                     /locus_tag="VNY79_00525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HWX70960.1"
                     /translation="MLTAADVIRLLDLKPHPEGGHFRETFRDASLVFPVAQAGEGAAG
                     RTASTAIYYLLARGERSHWHRTDAAEVWNWYAGAPLRLDIALETKARERVTLGSDLTA
                     GERPQAVVPAHAWQAAETLGEWTLVGCTVAPGFDFAQFELAPKGWEPE"
     gene            complement(883..1650)
                     /gene="gloB"
                     /locus_tag="VNY79_00530"
     CDS             complement(883..1650)
                     /gene="gloB"
                     /locus_tag="VNY79_00530"
                     /EC_number="3.1.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004416 - hydroxyacylglutathione hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0019243 - methylglyoxal catabolic process
                     to D-lactate via S-lactoyl-glutathione [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyacylglutathione hydrolase"
                     /protein_id="HWX70961.1"
                     /translation="MPVQTDLFGCFTDNFGVLIHDPGSGATASIDAPEAAPVEAALKR
                     TGWRLTDILVTHHHGDHTSGIAQLKKAHQCRVVAPRNEAQRIPLVDETVGEGDTVKVG
                     ALAGRVIETPGHTAGHISYFFPAEKLAFVGDTLFSIGCGRVIEGNPEMMWQSLLKLRG
                     LPDDTQFYCGHEYTAANVRFAKTIEPNNKALAARAEEVSRLLAAGKPTIPATIGAEKA
                     ANPFLRADIPEVAQSLGLAGSPAWKVFAEIRERKNRS"
     gene            1820..2596
                     /locus_tag="VNY79_00535"
     CDS             1820..2596
                     /locus_tag="VNY79_00535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HWX70962.1"
                     /translation="MDVVDLRNFYAQRLGTVARRFVSRGIRARWTDTSALRVLGIGYA
                     TPYLGLFREEAERCLAMMPAPQGVVRWPSSRPALAALVEEDDLPLTDSAVDRVLLVHA
                     LEASSDPVGLLREVWRVLSGGGRLLAVVPNRRGLWARMDTTPFGYGRPYSRSQITHLL
                     RETWFTPTGWGEALYVPPIARGWFLRSAVAWERTGATLSAPFAGVHIVEATKQVYRAI
                     PARRERRRFVPSLQPVLAPAPGAAALSSRDQLLRPATARS"
     gene            complement(2571..>2760)
                     /locus_tag="VNY79_00540"
     CDS             complement(2571..>2760)
                     /locus_tag="VNY79_00540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase (quinone)"
                     /protein_id="HWX70963.1"
                     /translation="LAKFRAGASLVQLYSGLVFRGLSLVAEIKAALIAALARARLDSL
                     GELVGADAAAVTSEPWPV"
BASE COUNT          404 a          953 c          937 g          466 t
ORIGIN      
        1 accaatctcg gctcgctgtt caacatgtgc cggccggcga tcgaaggcat gcgcgcgcgc
       61 aagttcgggc gcatcatcaa catctcctcg atcaacgggc agaagggtca gatgggccag
      121 gccaactatt cggccgccaa ggccggcgag atcggcttca ccaaggcgct ggcgcaggag
      181 agcgccaaga gcggcatcac cgtcaacgcc atctgccccg gctacatcgc gaccgacatg
      241 gtcaaggcga tgccaaagga tgtgctcgag aagaacatcc tgccgctcgt cccgctcggc
      301 cgcctgggcg agccggaaga ggtcgcacgc tgcgtcatct tcctcgcctc ggacgacgcg
      361 agcttcatca ccggctcgac gctgaccgcg aacggcggcc agtacatggt ttgatgttcg
      421 gcctttattc gggctcccag cccttcggcg ccagctcgaa ctgcgcgaag tcgaagccgg
      481 gcgcgaccgt gcaaccgacg agcgtccact cgccgagcgt ttccgccgcc tgccaggcgt
      541 gagcgggcac aaccgcttgc ggccgttcgc cggcggtgag atcgcttccc aacgtcacgc
      601 gctcgcgcgc tttcgtctcc agcgcgatgt cgagcctgag cggcgcgccg gcgtaccagt
      661 tccagacttc cgcggcgtcg gtgcgatgcc agtgcgagcg ttcgccgcgc gcgagcagat
      721 agtagatcgc agttgaggcg gtccgcccag ccgcaccctc tcccgcttgc gcgaccggaa
      781 acacgagcga cgcatcgcgg aaggtctcgc ggaaatgccc accctccgga tgcggcttga
      841 gatcgaggag ccggattacg tcggcggcgg tgaggattgc cttcaagagc ggttcttgcg
      901 ctcgcggatt tcagcaaaaa ccttccacgc cgggctgccg gcaagcccga gcgactgtgc
      961 gacttcgggt atatcggcgc gcaggaacgg attggccgcc ttctcggcgc cgatcgtcgc
     1021 cggaatggtg ggcttgccgg cggcgaggag ccggctcacc tcttcggcgc gcgcggccag
     1081 cgccttgttg ttcggctcga tggtcttggc gaagcggacg ttcgccgccg tgtattcatg
     1141 gccgcaatag aactgggtgt cgtcggggag accccgcaat ttgagcagcg actgccacat
     1201 catttccggg ttgccttcga tcacgcggcc gcagccgatc gagaacagcg tgtcgccgac
     1261 aaaagcgagc ttctctgccg ggaagaagta ggagatgtgg ccggcggtgt ggccgggggt
     1321 ctcgatcacc cgccctgcga gcgcgccaac tttcacggtg tcgccctcgc cgacggtttc
     1381 atcgaccagc gggatgcgct gcgcttcgtt gcgcggcgcg accacccggc attggtgcgc
     1441 tttcttcaat tgcgcgatcc cgctggtgtg gtcgccgtga tggtgcgtca ccaggatgtc
     1501 ggtcaggcgc cagcctgtcc gcttgagcgc cgcttcgacc ggcgccgcct cgggcgcatc
     1561 gatcgaggcg gtcgcgccgc ttcccggatc gtggatgagc acgccgaaat tgtcggtgaa
     1621 gcagccgaag aggtctgtct gtacgggcat ctcgacatcg ccgttgtggg cgcgaacgtc
     1681 gccgcggccc gaaatccata agtcgcgccg gctagagtag gcgctccccg ccagccgccg
     1741 caaggtcggg gtcatggatt cggggcttgc gctttcggcg cgccccggaa cgacgcagaa
     1801 aacgtgctat tttgccgcca tggacgtggt cgatctgcgc aatttctacg cccaacggct
     1861 cggcacggtg gcccggcgct tcgtcagccg cggcattcgc gcgcgctgga ccgacaccag
     1921 cgcgttgcgc gtcctcggca tcggttacgc gacgccctat ctcggcctgt tccgcgaaga
     1981 ggccgagcgc tgcctcgcca tgatgccggc gccgcagggc gtcgtgcgct ggccttcatc
     2041 ccgcccggcg cttgccgccc tggtcgagga ggacgatctg ccgctcaccg attcggccgt
     2101 cgatcgcgtg ctgctcgtcc atgcgctcga agcatcgtcc gacccggtcg ggctgttgcg
     2161 cgaggtgtgg cgggtgctgt ccggcggcgg ccggctgctc gcggtggtgc cgaaccggcg
     2221 cgggctgtgg gcgcgcatgg acacgactcc gttcggctac ggccgcccct attcgcgttc
     2281 gcagatcacg cacctcctgc gcgagacctg gttcacgccg actggatggg gcgaggcgct
     2341 ctacgtgccg ccgatcgccc gcggctggtt tctgcgctcg gcggtggcct gggaacgtac
     2401 cggcgcgacg ctctcggcgc cgttcgccgg cgtgcacatc gtcgaggcga cgaagcaggt
     2461 ctatcgcgcc atcccggccc ggcgcgagcg gcgccgcttc gtgccgtcgc tgcagccggt
     2521 gctcgccccc gcgcccggcg ccgccgcgct gtcttcgcgc gaccagctcc tcagaccggc
     2581 cacggctcgc tcgtgaccgc cgccgcatcg gcgccgacca gctcgccaag gctgtcgagg
     2641 cgtgcgcgcg cgagcgcggc gatgagcgcc gccttgatct cggcgacgag gctcagcccg
     2701 cgaaacacca gccccgaata aagctggacg aggctcgcgc cggcgcggaa tttggcgagc
//
LOCUS       DATMQB010000014         2577 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3724361, whole genome shotgun sequence.
ACCESSION   DATMQB010000014 DATMQB010000000
VERSION     DATMQB010000014.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2577)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2577)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2577
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3724361"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1415
                     /locus_tag="VNY79_00545"
     CDS             <1..1415
                     /locus_tag="VNY79_00545"
                     /inference="COORDINATES: protein motif:HMM:TIGR02262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016405 - CoA-ligase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="benzoate-CoA ligase family protein"
                     /protein_id="HWX70964.1"
                     /translation="RALQSLDIRREERILICLLDSIDWPTAFLGAIKAGVVPVPVNTL
                     TEDDYRFMLEDSRARLLVVSEELYPKFAKAISACANLAHVVVSGANGHGHQRFEELLA
                     GGGPAMTAAPTVRDDICFWLYTSGSTGKPKAAVHTHADLALTDALYAKPFLGIGETDV
                     CYSVAKLFFAYGLGNALTFPMAAGATTILLPDRPTPELVAAILKKHQVTVFYAVPTFY
                     AVFLASPQAPERGETRLRRCVSAGEALPADVGRRWSERYGADILDGIGSTEMLHIYLS
                     NRAGEVKYGTTGKPVPGYDVRLVDDDGRVIEKRGEMGELQVRGPTSAMMYWNNREQSR
                     ATFLGEWTRSGDKYLEDDDGYYVYCGRRDDMLKVGGIYVSPFEVEAALQSHPEVLEAA
                     VVGWPDEDTLIKPKAFVVLKSPDKADDALAQALKDHCRQKLAVFKYPRWLEFRRELPK
                     TATGKIQRFKLRAEAGGPPG"
     gene            complement(1491..2546)
                     /locus_tag="VNY79_00550"
     CDS             complement(1491..2546)
                     /locus_tag="VNY79_00550"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HWX70965.1"
                     /translation="MSFEFGVFHEFPRYAGVTDAEVFAQSFVQVDAAERWGLDVIWIA
                     ELHFLPERSVASAPLLIASAIASQTRRMKIGTAVQVLPLCHPLRLAEEVATLDHISRG
                     RLVFGVGRSGFPHTYEAYGIPYGESRERFAEVLEILKRCWAEERFSFEGKFHRFHNVT
                     IVPRPLQTPYPPLRIAATSADTYRAIGAVGLPIFVAVRLGTFEELGPSIAAYREAYQS
                     AGHAGQGEVYLRVPIYVAETEASARADPELSIMHFYRTLGLQLEGAAKRPGVDAGEER
                     AERGQALQTISYEDALRDKVITGTPASVAMRLKYLTGKLGLNGVLAELNCGGLLDNEK
                     VMRSLQLMCEEVAPCFR"
BASE COUNT          469 a          865 c          809 g          434 t
ORIGIN      
        1 gccgcgcgct gcagtcgctc gacatccgcc gcgaggaacg cattctcatt tgccttctcg
       61 acagtatcga ttggccgacc gccttcctcg gcgcgatcaa ggccggcgtg gtcccggttc
      121 ccgtcaacac gctgaccgag gatgattacc gcttcatgct cgaggacagc cgcgcccggc
      181 ttctggtggt gtcggaggaa ctctacccga aattcgccaa ggcgatcagc gcctgcgcca
      241 acctcgccca tgtcgtggtc tccggagcga acgggcacgg tcatcagcgc ttcgaggaat
      301 tgctggccgg cggcggcccg gccatgacgg cggcgccgac ggtccgcgac gacatatgct
      361 tctggctcta cacttccggc tcgaccggca agccgaaggc ggcggtgcat acgcatgccg
      421 acctcgcgct caccgacgcg ctttacgcca agcctttcct cggcatcggc gagaccgacg
      481 tctgctactc ggtcgcaaaa ctgttcttcg cctatgggct cggcaacgcg ctcaccttcc
      541 cgatggcggc cggagcgacg accatcctgc tgcccgaccg gccgacgccg gagctggtgg
      601 ccgcgattct gaagaagcac caggtcacgg tgttttatgc cgtgccgacg ttctacgccg
      661 tctttcttgc cagcccgcag gccccggagc gcggcgaaac gcgattgcgc cgctgcgtat
      721 cggccggcga ggcgctcccc gccgacgtcg gccggcgttg gagcgagcgc tacggcgccg
      781 acattctcga cggcatcggc tcgaccgaga tgctgcacat ctacctctcg aaccgcgccg
      841 gcgaggtgaa atacggcacc accggaaaac cggtgcccgg ctacgacgtg cgcctggtcg
      901 acgacgacgg ccgcgtgatc gagaagcgcg gcgagatggg cgagctgcag gtgcgcgggc
      961 cgaccagcgc gatgatgtac tggaacaacc gcgagcaatc gcgcgcgacc tttctcggcg
     1021 aatggacgcg ctcgggcgac aagtacctcg aggacgacga cggctactac gtctactgcg
     1081 gccgccgcga cgacatgctc aaggtcggcg gcatctacgt ctcgccgttc gaagtcgagg
     1141 cggcgctgca gagccatccc gaggtgctcg aggccgcggt cgtcggctgg cccgacgagg
     1201 acaccctgat caagccgaag gcgttcgtgg tgctgaaatc gccggacaag gccgatgacg
     1261 ctctggcgca ggcgctcaag gaccactgcc ggcagaagct cgcggtcttc aagtatccgc
     1321 gctggcttga attccgccgc gagctgccga agaccgcgac cggcaagatc cagcgcttca
     1381 agctgcgggc ggaggccggc ggccctccgg gctaagctgc atttccgcca cctggagatg
     1441 ctcggtgccg ccgccggcgg aagctcgatg tcaaggcgaa acccgccttc ttagcggaaa
     1501 cacggcgcca cctcctcgca catgagctgc agcgagcgca tgactttttc attgtcgagc
     1561 agacctccgc aattgagctc cgccagaacg ccattgaggc caagcttgcc ggtcagatac
     1621 ttgaggcgca tcgccaccga tgctggagtt ccggtaatca ctttatcgcg cagcgcatct
     1681 tcatagctga tggtctgcaa cgcctggccg cgctcggcgc gttcctcgcc cgcgtccacg
     1741 ccgggcctct tcgccgcgcc ctcgagttgc agtccgagcg tccgatagaa atgcatgatt
     1801 gatagctcgg ggtccgctcg tgccgacgct tccgtctctg caacgtagat cgggactcgc
     1861 aaataaacct cgccttgccc agcgtggccg gccgactgat aggcctcgcg ataggccgct
     1921 atgctgggcc ccagttcttc gaacgtaccg aggcggacgg caacgaagat gggcaagccc
     1981 acggcgccga tcgcccgata ggtgtctgcg ctcgtcgctg cgatgcgcaa cggcggatat
     2041 ggcgtctgca acggcctcgg gacgattgtg acattgtgaa acctgtgaaa cttcccctcg
     2101 aaggagaagc gttcctcagc ccagcaacgc ttgaggattt cgagcacttc ggcgaagcgc
     2161 tcgcggctct cgccgtaggg tatgccatag gcctcgtagg tgtggggaaa gccgctgcgg
     2221 cccacaccga aaacaagtcg tccacggctg atgtgatcaa gcgttgcgac ttcctccgcc
     2281 aagcgcaatg gatggcacag cggcagcacc tgcaccgcag tgccgatttt catgcggcgg
     2341 gtctgcgaag cgatggcact ggcgatcaag agcggagcgg acgcgaccga tcgctccggg
     2401 aggaagtgca attccgcgat ccagatgacg tcgagacccc aacgctcagc cgcgtccacc
     2461 tggacgaagg attgcgcgaa tacctctgca tccgtcaccc ctgcgtagcg cggaaactcg
     2521 tgaaagacac cgaactcgaa cgacatgctg cctcccccgc ggcgctatcg cgaacgg
//
LOCUS       DATMQB010000015         4658 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1243904, whole genome shotgun sequence.
ACCESSION   DATMQB010000015 DATMQB010000000
VERSION     DATMQB010000015.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4658)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4658)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4658
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1243904"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..762
                     /gene="tam"
                     /locus_tag="VNY79_00555"
     CDS             <1..762
                     /gene="tam"
                     /locus_tag="VNY79_00555"
                     /EC_number="2.1.1.144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030798 - trans-aconitate
                     2-methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="trans-aconitate 2-methyltransferase"
                     /protein_id="HWX70966.1"
                     /translation="DWSARQYLKFEDERTRPPRDLLAQVPLERARRVVDLGCGPGNST
                     ALLIERYPQAAVIGIDSSSDMLRQARGRLPACRFVNADIATWTPEAATDLLFANAVFQ
                     WLPDHTVVLRRLLEALPAGGVLAVQMPDNTREPAHLFQREVAEVGPWADNPMRAAVRP
                     DLPPAEAYYDLLRPHCTRIDIWHSVYNHVMASPQAIVEWFKGSSLQPFLSPLDAAARE
                     KFLAAFAEKIARAYQPRVDGKLLLRFPRLFIVAVR"
     gene            921..1568
                     /locus_tag="VNY79_00560"
     CDS             921..1568
                     /locus_tag="VNY79_00560"
                     /inference="COORDINATES: protein motif:HMM:NF025850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HWX70967.1"
                     /translation="MAAVEIIGFPQSTYTRVARMVCEEKAIPYDLKASPPHSPDVTAI
                     HPFGKIPVMRHGDFELCESKAIATYLDLTFPGPKLIPTEPRQAALTEQWVSLVNTRMD
                     GTMVRTYLFAYIFPKTGDGTPDRKAIEGVTPALQEEIGLLDRAVAKGGYLAGDSFTFA
                     DVNLLPILFYLRNFPEAGGAIGAAKSLSPYYERMAARPSFQNTIPPPPAQQAKAS"
     gene            1657..2835
                     /locus_tag="VNY79_00565"
     CDS             1657..2835
                     /locus_tag="VNY79_00565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HWX70968.1"
                     /translation="MLIHGARADAAFQAWLQSLWPQAQTLGVSRATFDLATNGLEPDL
                     SLPDLVLPGRPERPERGQAEFVQTPADYLKEGTIAGLAAHGRKLLDQYHAPLSAIEQQ
                     FGVNPTVLLAIFGRETDYGRSRDTLNAIRVLATQAYVGKRREKFQEEFLLALKILDQR
                     QIKLADMRSSWAGAMGLTQFLPSDYFKYAVDLDGDGRADIWNSVPDALASAAKQLVDK
                     GWQRGLRWAYEVHPPADVDCTIGVPDHTLPMGDWVQRGFAPAYGRQLSAAERAEPASL
                     LQPAGLYGPAFLATRNYFAIKEYNFSDLYVLFVGHLSDRMVDTRPFETPWSKVAQLPT
                     RDLDRMQQILAARGYYHDKIDGKAGMKTRAALGDYQKRNGLKVDCWPTAALLAHMERP
                     "
     gene            complement(2879..4150)
                     /locus_tag="VNY79_00570"
     CDS             complement(2879..4150)
                     /locus_tag="VNY79_00570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extensin family protein"
                     /protein_id="HWX70969.1"
                     /translation="MSRGVRSLLFSSTAIAALGVLAGCGHYWFGEREAWRREAEVACI
                     NSGAVKETPERVRISAINGPGICGADFPLRVSALGDSAPLGYDDEPLRPPGNIPTGAM
                     PPRWPVVQSNPLPPPAGPPQTRAAPPAASPAPPRAAPQVGQPISLIPPGAAEPDDDNL
                     GYKPRPPRPYDGAPAARATPSPAAAYPTYAPPPSAPRSPPQLSPSAEEHVPLGPARGP
                     VVTGSIGPVEVKPAATLACPLVSRLDKWIATAVQPAALHWFRQPVVEIKQISAYSCRG
                     MNGNAYARISEHAFGNALDIAEFELADGRKVSVQYGWHGAPEEQGFLRDVQAAACEEF
                     STVLAPGANIYHYNHIHVDLMRRASGRSICEPAAIPGEVVAERARSRYAAQHYGDASV
                     TGSISRKPQRHALSYSGEDDDRLPLAMPGDD"
BASE COUNT          787 a         1549 c         1532 g          790 t
ORIGIN      
        1 gattggagcg cacggcaata tctgaagttc gaggacgaac gcacgcggcc gccgcgcgat
       61 ctgttggcgc aggtgccgct tgagcgcgcg cgccgcgtcg tcgatctcgg ctgcgggccg
      121 ggcaattcca ccgcgttgct catcgaacgc tacccgcagg ccgcggtgat cgggatcgat
      181 tcctcgtccg acatgctgcg ccaggcgcgc gggcggctcc ccgcatgcag gttcgtcaac
      241 gccgacatcg ccacctggac gccagaagca gcaacggacc tcttgttcgc caatgccgtg
      301 ttccaatggc tgccggacca tactgtagtg ctgcggcggc tgctcgaagc cttgccggcg
      361 ggcggcgtgc ttgccgtgca gatgcccgac aatacccgcg agcccgcgca cctcttccag
      421 cgcgaagtgg cggaggttgg cccgtgggcg gacaatccca tgcgcgccgc ggtccggccc
      481 gacctgccgc cggccgaagc ttattacgat ctgctccggc cgcactgcac ccgcatcgat
      541 atctggcaca gcgtctacaa tcacgtgatg gcgagcccgc aagcaatcgt cgaatggttc
      601 aaggggtcgt cgctgcagcc gttcctgtcg ccgctcgatg ccgccgcgcg ggaaaagttt
      661 ctcgccgcct tcgccgagaa gatcgcgcgc gcctaccagc cgcgcgtcga cggcaagctg
      721 ctgttgcgat ttccgcggct gttcattgtc gccgtccgct gaccggcgga cgtcgcgaag
      781 gccgtaacgc cggggatcgg cgcttgacag gctggcggcg gccgctctat gcttaaccta
      841 ttggttaagt attggacggt gccgcgacgg ccgcgctgct gtggcctgtg cgtcggcgcc
      901 ggagcaaagg gagaagcgac atggcagccg tggaaatcat cggctttccc caatcgacct
      961 atacccgcgt cgcccgcatg gtctgcgagg aaaaggcgat cccctacgac ctcaaggcgt
     1021 cgccgccgca ttctccggac gtcaccgcga tccacccctt cggcaagatc ccggtgatgc
     1081 gccacggcga cttcgaactg tgcgagtcga aggcgatcgc aacctatctc gatctcacct
     1141 ttcccggccc gaaactgata ccgaccgaac cgcgccaggc cgcgcttacc gaacaatggg
     1201 tgtccctggt caataccagg atggacggga cgatggtgcg cacctatctg ttcgcctaca
     1261 tcttcccgaa gaccggcgac ggcacgcccg atcgcaaggc gatcgaaggc gtgacgcctg
     1321 cgcttcagga ggagatcggc ctgctcgatc gcgccgtcgc caagggcggt tacctcgcgg
     1381 gcgacagctt taccttcgcc gacgtcaatc tgctgccgat cctgttctac ctgcggaatt
     1441 ttcccgaggc gggcggcgcc ataggggcgg cgaagtcgct ctcaccctac tatgagcgca
     1501 tggcggcgcg accgagtttt cagaacacga taccgccgcc gccggcgcaa caggccaagg
     1561 catcgtaacg attggattcc ggcgccgctg ccgtgatagt gcgggacgat gagaatcgcc
     1621 ccgtcattca ttcttagcgc gctgctgagc ggcctcatgc tcatacacgg agcgcgcgcc
     1681 gacgctgcgt tccaggcgtg gctgcaatcg ctgtggccac aggcgcagac gctcggcgtg
     1741 tcgcgcgcca cattcgatct ggcgacgaac ggtctcgagc cggatctatc gctccccgac
     1801 ctggtcctgc ccggccggcc agaacggccg gagcgggggc aagccgagtt cgtgcagacg
     1861 ccggcagact acctcaagga ggggaccatc gccggcctcg ccgcgcacgg tcgcaagctg
     1921 ctcgaccaat accacgcgcc gctgagtgcg atcgagcagc agttcggcgt caacccgacg
     1981 gtcctgctcg ccatcttcgg gcgcgagacc gactacgggc gctcccgcga cacgttgaac
     2041 gcgatccggg tgctggcgac gcaggcgtat gtcggcaagc gcagggaaaa gtttcaggaa
     2101 gaattcctgt tggcgctgaa gatcctcgat cagcggcaga tcaagctcgc cgatatgcgc
     2161 agctcctggg ccggcgccat ggggcttacc cagttcctgc cgtccgacta tttcaaatac
     2221 gccgtcgatc tcgacggcga cggccgtgcc gacatctgga actcggtgcc cgacgcgctc
     2281 gcctccgccg ccaagcaact cgtcgacaag ggctggcagc gcggcctgcg ctgggcctac
     2341 gaggtgcacc cgcccgccga tgtcgactgc accatcggcg ttcccgacca cacgctgccg
     2401 atgggcgact gggtgcagcg cggcttcgcg ccggcctacg gacggcaatt gtcggcagcg
     2461 gagcgcgccg agcccgcttc gctgctgcag ccggccggcc tctacggccc agcctttctg
     2521 gcgaccagaa actatttcgc gatcaaggag tacaatttct ccgacctcta cgtgctcttc
     2581 gtcggccacc tcagcgaccg catggtggat acgcggccgt tcgagacgcc gtggagcaag
     2641 gtggcacagc tgccgacccg cgatctcgat cgcatgcagc agatactcgc cgcgcgcggc
     2701 tattatcacg acaagatcga cggcaaggcc gggatgaaga cgcgcgcagc gcttggcgat
     2761 tatcagaaac gcaacgggct gaaggtcgac tgctggccga ccgccgcgct gctcgcgcat
     2821 atggagcgcc cgtagcgact ctccggcggc gcgcgcttct gctccgcgca aaaaaacctc
     2881 agtcgtcgcc gggcatggcg agcggcaggc gatcatcgtc ctcgccggaa tagctgaggg
     2941 cgtgccgctg cggcttccgg ctgatcgagc cagtgactga ggcgtcgccg tagtgctgcg
     3001 cggcgtagcg cgaccgcgcg cgctcggcga cgacctcgcc ggggatcgcg gccggctcgc
     3061 agatgctgcg gccgctcgca cgccgcatca ggtcgacgtg gatgtgattg tagtgataga
     3121 tgttggcccc cggcgcgagc acggtgctaa attcctcgca ggccgccgcc tgcacgtcgc
     3181 gcagaaaacc ctgctcctcc ggcgcgccgt gccagccata ttgcacgctg accttgcggc
     3241 cgtcggccag ttcgaactcg gcgatgtcga gtgcgttgcc gaacgcgtgc tcggaaatcc
     3301 gcgcataggc gttgccgttc attccgcggc aggaataggc ggatatttgc ttgatctcga
     3361 cgaccggctg ccgaaaccag tggagcgcgg ccggttgcac tgccgtcgcg atccacttgt
     3421 cgagcctgga gacgagaggg caggccagcg tcgccgccgg cttgacctcg accgggccga
     3481 tcgatccggt caccaccggg ccgcgcgcgg ggccgagtgg tacgtgctct tcggcactgg
     3541 gtgagagttg cggtggcgag cgcggcgcgg atggcggcgg cgcatacgtc ggatacgctg
     3601 ccgcgggcga gggcgtcgcg cgcgcggcgg gcgcgccgtc atagggacgc ggcggacggg
     3661 gtttgtagcc cagattgtcg tcatccggtt cggcggcgcc tggcggaatg agcgatatcg
     3721 gctgcccgac ttgcggcgcg gcccgcggcg gggcggggga agcggcaggc ggcgccgcgc
     3781 gcgtttgcgg cgggccagcc ggcggcggga gtggattcga ctgcaccacc ggccagcgcg
     3841 gtggcatcgc gcccgtggga atgttgcctg gcggccgcaa cggctcgtcg tcgtatccga
     3901 gcggcgcgct gtcgccgagc gccgacaccc gcagcggaaa atcggcgccg caaatcccgg
     3961 ggccgttgat cgcggagatg cgcacgcgtt ccggcgtctc cttcacggca ccggaattga
     4021 tgcaggcgac ttccgcctcg cgccgccacg cttcgcgctc gccgaaccag tagtggccgc
     4081 acccggcgag tacgccgagc gccgcgattg cggtcgagct gaagagcaac gagcggacgc
     4141 cacgcgacat gttccgagaa tgcgggcaat cccgttaacg actcttcaac gcatgcgtcg
     4201 gccgcgttaa gcggcgcgta accatgcgga cgccgcatgc gcgcaaactg ttgccccgtg
     4261 cgatcaagga gcaattgttg gcgtgcattc cttcggaaaa tgtcagatgc accgcgccat
     4321 gaacatctta gtctcaggcg caaccgttca tccgacaaaa attgctgtca aatctcagga
     4381 ccttggcaaa caaatctcgt gcaagcgtgt tccgcagcaa attctgcggc agcgcaacaa
     4441 gagatttgct ttcgcgttct gcggcgttct gctagccttc ccgccagcac aactctgatg
     4501 gaggtgcgac gagtggacct tagatcgaag ctcaatgtac tggcggtgtg cgccgtattt
     4561 gtattcgttg gcgcgatcct gctgggggcc ttttgagttt ctgaaagtcc aacgccagaa
     4621 gccatcaagg atcgccgcgt tcaaccggcg gtcgggaa
//
LOCUS       DATMQB010000016         9806 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4035363, whole genome shotgun sequence.
ACCESSION   DATMQB010000016 DATMQB010000000
VERSION     DATMQB010000016.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9806)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9806)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9806
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4035363"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..273
                     /locus_tag="VNY79_00575"
     CDS             <1..273
                     /locus_tag="VNY79_00575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HWX70970.1"
                     /translation="TPDGKVPDEPRISYLTAYTAAMFDAIAAGVDVRGYFVWALLDNF
                     EWSSGYGARFGLVYVDYPTQRRLPKESFRWFADQIKAHSASSVPSA"
     gene            complement(236..1327)
                     /locus_tag="VNY79_00580"
     CDS             complement(236..1327)
                     /locus_tag="VNY79_00580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:1904680 - peptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SbmA/BacA-like family transporter"
                     /protein_id="HWX70971.1"
                     /translation="MADASHSDRARLVRFWTSARGFWRGKSGMIAWPLTVGLVVIAVF
                     QLAVQYRLNYWNRDFFNALARHDGDTLWHQVAVFAPLAIMSVGLSVISVWTRMTTQRK
                     WRQWLTTDILSDWLADDHYRKLEAVGGEYKNAEYRISYDAKSATDSPVDLTLGLVNSV
                     MTAGVFTGVLWSVGGGLTIAVGGLMVTIPGYLVIGAVIYALIFTGIMLVIGRNLPSVI
                     QMQSQGEAEFLAAANEIRESGNHPASDQDRKRQSAVWDALSQVLQRWRQLLWQLMGTT
                     FVSQTDLLFAPVFGWFLCVPKYLAGSMTLGELTQASAAFVTVQVAFNWLVDNYQRLSD
                     WRSAAGRVAVLLLALDQVKHSEPTKPNAP"
     gene            complement(1845..2831)
                     /locus_tag="VNY79_00585"
     CDS             complement(1845..2831)
                     /locus_tag="VNY79_00585"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate kinase"
                     /protein_id="HWX70972.1"
                     /translation="MLLSCGDALIDFLPVKSADGRDAFMPVVGGSCLNVAIGIGRLGA
                     PAGFVGGISTDLFGAMIADHAAVSHVELRYATRSAQQTKLAFVRTVDGEPNYTFYDEG
                     TASRNWSYRPGSLPFAEIEAIHFGSTTLVDGKAAAETMRMVEEARGAATLSFDPNCRP
                     RLVHDKAEYVDRMNQFATRAGIVRLSDSDFAFLYGGHEYAKRAEALFAADTKLFIVTR
                     GVRGAQAWHKRAGVIDVETPQVEVVDTIGAGDSFQAGLLVALRAMGRITAEPLAEMTA
                     EELHRAVAFATKCAAFTCGRRGADPPHLFEIGAATFADELQTDPGDRTATGI"
     gene            complement(2822..4501)
                     /locus_tag="VNY79_00590"
     CDS             complement(2822..4501)
                     /locus_tag="VNY79_00590"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0019200 - carbohydrate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FGGY-family carbohydrate kinase"
                     /protein_id="HWX70973.1"
                     /translation="MEQAFIGVDVGTASARAGMFAADGRLLATARRPIAIWHEAGDIV
                     EQSSADIWTACTEAVRAVLKETGQSPSSVKGIGFDATCSLVVLDRGGMPLSVSSSGDP
                     HRNIIVWMDHRAIAQADRINETGDEVLRYVGGIISPEMETPKLLWLKEHLPATYHAAG
                     HFFDLADYLTYRATGKTTRSMCTLTCKWTYLAHERRWSRRYFERIGLADLLSNDCQKI
                     GAEMVAPGTALGDGLLPESAAALGLLPGTPVAAALIDAHAGGIGTVGGEGADGRPVNV
                     LDRLAYIMGTSACIMATTETPRFVPGVWGPYFSGMIPGLWLNEGGQSAAGAGIEHLVR
                     SHPAHAEATAAATAADMSLLDFLERRAVARFQTVGETALLARNTHVLPEFLGNRSPHA
                     DPSARAVIAGLDLDCDLDSLERLFVSGLCGLAYGLADVVDVMRAHAIPCRMMVISGGA
                     SRSPLVRQIMADTTGLTVALPATPEPVLLGAAMLGAVAGGAFASLRDAMQAMSRLGPV
                     TRATAPAMTHFHSAKRRVYALMRQFEKESRTAMQAHGACLPAATEDTAQCC"
     gene            complement(4528..5301)
                     /locus_tag="VNY79_00595"
     CDS             complement(4528..5301)
                     /locus_tag="VNY79_00595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX70974.1"
                     /translation="MYLEMFKLTGRVALVTGGGRGIGLACAEALAEAGARVIIADRDA
                     ALADEGRAALRARGFDAEVVIMDVSDAGRVTQVADEVVSRHGKIDILVNSAGIARSET
                     PAEKVTDEHWLNVLDVNLNGTFWCCRAFGGQMLKAKSGAIVNIGSMSGFIVNKPQEQC
                     YYNASKAAVHHLTKSLAAEWGARGVRVNAVAPTYIATPLNEFVKSNPAMYDAWIGGTP
                     MGRLGKVEEIASVVLFLASDAASLMTGSIVLADGGYTCW"
     gene            complement(5366..6370)
                     /locus_tag="VNY79_00600"
     CDS             complement(5366..6370)
                     /locus_tag="VNY79_00600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012030091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX70975.1"
                     /translation="MGRITLEGVRKSFGKYAVIHDANLDIEDGSFVVFVGPSGCGKTT
                     LLRLIAGLEDITAGRILIDGTNVVGVPPAKRGLSMVFQSYALYPHMSVRGNIGFGLKM
                     AGLPRDEINRRVEAAAATLNLTQYLDRRPRELSGGQRQRVAIGRAIVREPKAFLFDEP
                     LSNLDAALRVQMRLEVTKLQRQLATTAIYVTHDQVEAMTMADRIVVLNAGNIEQYGSP
                     LELYDRPANLFVAGFIGSPRMNFIGGEQAQRHGAATIGIRPEHLKASRDGEGWEGKVS
                     VAEHLGSDTFLYVDVPGIGSLTARSIGELGLAPDDTVRLLPDPRRIHRFDRDGKTISG
                     "
     gene            complement(6411..7241)
                     /locus_tag="VNY79_00605"
     CDS             complement(6411..7241)
                     /locus_tag="VNY79_00605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014329271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HWX70976.1"
                     /translation="MARRVSTTHKLVTTVAAWIVGFVIFFPILWMVLASFKTELEAFA
                     IPPSFLFFHWTTENYAAVQERSDYLHHAINSIVIAGGSTLIALLIAIPAAWSMAFAPT
                     KRTRDVLLWMLSTKMMPPVGVLVPIYLLYRTFGLLDSRGGLIIVLCLGNLPIVVWMLF
                     TYFKEIPRDILEAARMDGATVGRELIYVLTPMALPGIASTLLLNVILAWNEAFWTLNL
                     STSAAAPLTVFIASYSSPEGLFWAKLSAASTLAIAPILVLGWFSQRQLVRGLTFGAVK
                     "
     gene            complement(7247..8116)
                     /locus_tag="VNY79_00610"
     CDS             complement(7247..8116)
                     /locus_tag="VNY79_00610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HWX70977.1"
                     /translation="MTKETQRVGRLALTPAVALLFIWMIVPLAMTIYFSTLHYTLLNP
                     GTEAFIGLDNYYYFLTDPAFLYSMRNTLLLVGSVLAITIVLGTLIAILLDQAVVGRSI
                     VRLMVIAPFFIMPTVSALVWKNLLMHPVSGLFAFLATSLGLTPIDWFTDAPLLAIILI
                     VAWQWLPFATLILLTALQSLDEEQKEAAEMDGAGAVSAFFYITLPHLARPITVVILIE
                     TIFLLTVFAEIFVTTGGGPGLATTNIAFLIYLQALIEFDVGTASAGGLVAVMIANIVA
                     FFLVRIVGRNLDA"
     gene            complement(8148..9356)
                     /locus_tag="VNY79_00615"
     CDS             complement(8148..9356)
                     /locus_tag="VNY79_00615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015916982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HWX70978.1"
                     /translation="MIRMQGLTSNFTAKNPDITVNWVTLEENVLRQRVTTDIATKGGQ
                     FDVLTIGTYEVPIWGKQNWLVPLDKLGASYDAGDLLPKIRDADTVGGKLYAAPFYGES
                     SFTMYRTDLFKKAGLAMPNAPTWDFVIDAAKKITDKSAGIYGVCLRGKAGWGENMAFL
                     TAMANSYGARWFDEKWQPQFNSPEWKTTLTTYVNLMHDAGPPGASSNGFNENLALFNA
                     GKCGMWIDATVAASFVTDPKQSQVAANVGFALAPNNGLGKNANWLWAWNLAIPAGSKK
                     VEAAEKFIAWATSKEYAELVASKEGWARVPPGTRSSLYQNAEYQKSAPFAKLTLESID
                     SADPNHPTVKPVPYVGVQYAAIPEFQGIGTAVGQQFSAALAGTTSVDAALAAAQAQTE
                     REMKRAGYIK"
     gene            complement(9599..>9806)
                     /locus_tag="VNY79_00620"
     CDS             complement(9599..>9806)
                     /locus_tag="VNY79_00620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030246 - carbohydrate binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar-binding domain-containing protein"
                     /protein_id="HWX70979.1"
                     /translation="AFDTAGRFINGSTNLRLTSVPHPSPAAMLTVAAALGPAKIPAIL
                     AALRGRLINGLITDEATAKALLAR"
BASE COUNT         1800 a         3121 c         3167 g         1718 t
ORIGIN      
        1 acgccggacg gcaaggtgcc cgacgaaccg cgcatctcgt atctcacggc ctataccgcg
       61 gcgatgttcg acgcgatcgc ggccggggtc gacgtgcgcg gctatttcgt ctgggcgctg
      121 ctggataatt ttgaatggag ctcgggctac ggcgcgcgct tcgggctcgt ctacgtggac
      181 tatcctaccc agcgccggct gccgaaggaa tcgtttcgct ggttcgcgga ccagatcaag
      241 gcgcattcgg cttcgtcggt tccgagtgct tgacctgatc gagcgcgagc agcagcacgg
      301 caacgcggcc ggcggcggag cgccagtccg acaggcgctg ataattgtcg accagccagt
      361 tgaacgccac ctgaaccgtg acgaaggcgg ccgaggcctg tgtcaattcg ccgagcgtca
      421 tgctgccggc gagatatttc ggcacgcata gaaaccagcc gaagaccggc gcgaacaaaa
      481 gatcggtctg cgagacgaac gtcgtgccca tcaactgcca gagcagttga cgccagcgct
      541 gcagcacttg cgacagtgcg tcccaaaccg cactctgccg tttgcggtct tggtcgctcg
      601 ccgggtgatt gccggactcg cggatctcat tggctgccgc cagaaattcg gcctcgccct
      661 ggctctgcat ctgaatgacc gacggcaggt tacggccgat caccagcatg atgccggtga
      721 agattagtgc atagatgacc gcgccgatga cgagataccc cggaatggtc accatcaggc
      781 cgccgacggc gatcgtcagc ccgccgccga ccgaccagag cacaccggta aagacgccgg
      841 cggtcatcac cgaattgacc agccccagcg tcaaatcaac cggtgaatcg gtcgccgatt
      901 tggcgtcgta ggagatgcgg tattcggcat tcttgtattc gccgcccacc gcttcgagct
      961 tgcgatagtg atcgtcggcg agccagtcgc tgagaatatc ggtggtcagc cattgccgcc
     1021 atttgcgctg tgtggtcatg cgcgtccaga ccgaaatgac ggacaagccg acactcatga
     1081 tagcgagcgg cgcaaacacc gcgacctggt gccagagcgt gtcgccgtcg tggcgggcga
     1141 gcgcattgaa gaaatcgcga ttccagtagt tgaggcggta ctgcacggcg agctgaaata
     1201 ccgcgataac cacaaggccg accgtcaacg gccacgcgat catgccggac ttgccacgcc
     1261 agaatccgcg ggcgctcgtc cagaaccgga caagccgcgc acgatccgaa tgactggcgt
     1321 ccgccatcgc cccctgcacc cggcgtcgat gtttggcgca ccgcggcggc gccactgccg
     1381 tttgcaggat catttcacgg cagcgcggcc catgtcgagc ggggcatgta aagcaggcca
     1441 aatctggcgg agccaagcct gagcactgct agaccgcgat ccgattcagc tggaccggat
     1501 caccggcgct ccaagtgatg gagaaagcac ctgtaatcgg cgcacccact tctcgacaag
     1561 acgaccatcc ccgtcaaagc ggaagatatt cggaggtccc agacgacgcg gcggccgttc
     1621 ggcggcagaa cgtccatctg cggagtggac tgctacgatc gccccttgac cccccttgtc
     1681 ccctacacga atgatcattc gcgcgtgact ttggcgaatg gatttgatct atttcaggtg
     1741 ggacgtcggg cctgaccgcg cgactggcat gcgaggcttt ggcaaatacg ggtggcataa
     1801 gatcagcaat cgccgctgct aatggcaggt gtggttgcca ctcctcaaat tcctgtggcg
     1861 gtcctatcgc ctggatcggt ttgaagctcg tccgcaaacg ttgccgctcc aatctcaaag
     1921 agatggggag gatcggcgcc gcgccgaccg caggtgaaag ccgcgcactt ggttgcaaag
     1981 gcgaccgcgc gatggagttc ctccgcggtc atctcggcga gcggctccgc cgtgatccgg
     2041 cccatggcgc gcagagcgac cagaagtcct gcctggaagc tgtcgcccgc accgatcgta
     2101 tccacgacct cgacctgcgg cgtctcgaca tcgatcacgc ccgcccgctt gtgccaagcc
     2161 tgcgcgccgc gaacgccgcg cgtgacgatg aagagcttcg tgtctgcggc aaacagcgcc
     2221 tccgcccgct tcgcgtattc atgtccgccg taaaggaaag caaaatcgct gtcggagagg
     2281 cgcacgatgc cggcgcgcgt ggcgaattga ttcattcgat caacatactc ggccttgtcg
     2341 tggaccagcc gaggccggca attcgggtca aatgacaggg tggccgcgcc gcgcgcctcc
     2401 tcgaccattc gcatcgtttc cgccgccgct ttgccgtcga ccagcgtcgt cgatccgaag
     2461 tggatcgctt cgatctcggc gaatgggagc gagcccggcc gataggacca attccgcgaa
     2521 gccgttcctt cgtcgtagaa cgtatagttc ggctcgccat cgaccgtgcg cacgaaggca
     2581 agctttgtct gctgggcact gcgcgtagcg tagcgcaact ccacatgcga gacggcggcg
     2641 tgatccgcga tcatggcgcc gaaaaggtcg gtcgaaatgc cgccgacgaa gccggcgggc
     2701 gcgccgagcc ggccgatgcc aatcgcgaca ttgaggcagg agccgcccac gacgggcatg
     2761 aatgcgtcgc gcccgtccgc gctcttgacc ggaagaaagt cgatgagcgc atcaccgcag
     2821 ctcaacagca ttgcgccgtg tcctccgtcg ctgccggcag gcatgcgcca tgcgcctgca
     2881 tggcggttct gctttctttt tcgaattggc gcatcaatgc atagacccgc cgcttggcgg
     2941 aatgaaagtg ggtcatcgcc ggcgccgtcg cccgcgtcac cggcccgagc cgggacatcg
     3001 cctgcatggc gtcgcgaagg gaggcgaacg ctccgccggc gaccgccccc agcatggccg
     3061 cgccgagcag caccggttcc ggcgtcgccg gcagcgccac cgtaagtccc gtggtatcgg
     3121 ccatgatctg gcgcaccagg ggacttcggc tcgctccgcc gctgatcacc atcatccggc
     3181 aagggatggc atgcgcccgc atcacatcga cgacatcggc aagcccgtac gccagtccgc
     3241 acaatccgga aacgaaaagg cgctccaggc tgtccagatc acaatcaaga tcgagtccgg
     3301 caataaccgc acgcgcactg ggatccgcat gtggtgagcg gttgccgagg aattcgggca
     3361 gcacatgggt gttgcgcgcg agcagcgcgg tttctccgac cgtctggaag cgcgctaccg
     3421 cacggcgctc caaaaaatcg agcaaactca tgtccgcagc tgttgcggcc gccgtggctt
     3481 cggcgtgcgc cggatgcgag cgcacgaggt gctcgatccc ggccccagcc gcggattggc
     3541 ctccttcgtt caaccacaga ccggggatca ttcccgagaa atacgggccc cagacccccg
     3601 gcacgaagcg cggcgtctcg gtggtcgcca tgatacaggc cgacgtgccc atgatgtagg
     3661 cgaggcgatc gagcacattc accggccttc cgtcggcgcc ctccccgccc acagtgccga
     3721 ttcccccagc atgcgcgtcg atcagtgcgg cggcgaccgg cgtacccggc aacaggccga
     3781 gcgctgccgc actctccggc agcaagccat cgccgagcgc cgttccgggc gcaaccattt
     3841 cggcaccgat cttctgacag tcattgctca ggaggtcggc gagcccgatc cgctcgaagt
     3901 agcgccggct ccagcgccgc tcgtgggcga gatacgtcca cttgcaggtc agcgtgcaca
     3961 tcgaccgcgt ggttttaccg gtcgcgcgat aggtgagata atcggcaaga tcgaagaagt
     4021 gtccggcggc gtgatacgtc gccggcaaat gctccttgag ccatagcagc ttcggtgttt
     4081 ccatctccgg cgagatgatg ccgccgacgt agcgcagaac ctcgtcgccg gtttcattga
     4141 tccgatcggc ttgcgcgatc gcccggtgat ccatccagac gatgatgttg cggtgcggat
     4201 cgccggagga gctgacgctg agcggcatgc cgccgcggtc gagcacgacc aaggagcagg
     4261 tcgcgtcgaa gccgattccc ttgacgctcg acggggattg acccgtttcc ttgaggacgg
     4321 cacggaccgc ttcggtgcag gctgtccaaa tgtcggcgga ggactgctcg acgatatcgc
     4381 cagcctcgtg ccagatcgcg atcggccggc gcgctgttgc cagcagcctg ccgtcggccg
     4441 cgaacatccc ggcgcgggca ctggcagtgc cgacgtcgac gccgatgaaa gcctgctcca
     4501 tagggccgac gccttacctc gcgacgctca ccagcaggtg tagccgccgt cggcaaggac
     4561 gatgcttccg gtcatcaggc tcgcggcgtc cgatgcgagg aacaggacaa ccgaggcgat
     4621 ctcctccacc ttgccgaggc ggcccatcgg ggtgccgcct atccaggcat catacatcgc
     4681 ggggttggac ttgacgaatt cgttgagcgg cgtggcgatg taggtcggcg ccacggcgtt
     4741 gacgcgcacg ccgcgtgcgc cccactcggc ggcaagcgac ttggtgagat gatgcaccgc
     4801 cgccttggag gcgttgtagt agcattgctc ctgcggcttg ttgacgatga agcctgacat
     4861 cgagccgata ttcacgatcg cgccggactt cgccttgagc atttggccgc cgaaggcgcg
     4921 gcagcaccag aatgtcccgt tgagattgac gtcaagcacg ttgagccagt gctcatcagt
     4981 gaccttctcg gccggcgtct cgctgcgagc aatcccggcg ctgttgacca ggatgtcgat
     5041 cttgccgtgc cgcgacacca cctcgtcggc gacctgcgtc acccgccccg cgtcgctcac
     5101 gtccatgatc acgacctcgg cgtcaaagcc cctggcacgc agggccgcgc gcccctcatc
     5161 ggcaagggcg gcgtcgcggt cggcgatgat cacccgggcg ccggcctcgg ccaatgcctc
     5221 cgcacatgcg aggccgatgc cgcggccgcc gccggtcacg agggcgacgc gcccggtgag
     5281 cttgaacatt tccaaataca tgacttttct ctttgcttcg gctggaggcc tgcgatctgt
     5341 tcaattcggg agcgcctaca cgcgcctacc cgctgatcgt ctttccgtcg cgatcgaacc
     5401 ggtggatgcg gcggggatcg gggagcagac ggaccgtatc gtcgggcgcg agccccagct
     5461 cgccgatcga gcgcgcggtg aggctgccga tcccgggcac atcgacgtag agaaaggtgt
     5521 cgctgccgag atgctcggcc accgagacct tcccttccca gccttcgccg tcccggcttg
     5581 ccttgagatg ctcgggacga atgccgatcg tggccgcacc gtgacgttgc gcttgctcgc
     5641 cgccgatgaa gttcatgcgc ggcgagccga tgaacccggc gacgaaaaga ttcgccggcc
     5701 ggtcgtagag ctcgagcggc gagccgtatt gctcgatgtt accggcattg agcaccacga
     5761 tgcggtccgc cattgtcatc gcctcgacct ggtcgtgagt gacatagatg gcggtggtcg
     5821 cgagctgccg ctgcagcttg gtcacctcga gccgcatctg cacgcgcagc gccgcgtcga
     5881 ggtttgacag cggctcgtcg aacaggaacg ccttcggctc gcgcacgatc gcccggccga
     5941 tcgccacgcg ctgacgctgg ccgccggaga gttcgcgcgg tcggcggtcg aggtattggg
     6001 tcaggttcag ggtcgcggca gcggcctcga cccggcggtt gatctcatcc cgcggcagac
     6061 ccgccatctt cagcccgaag ccgatattcc cgcgcacgct catgtgcggg tagagcgcat
     6121 aggactggaa gaccatcgag aggccgcgct tcgcgggcgg gacgccgacg acattcgtgc
     6181 cgtcaatcag gatgcggccg gcagtgatgt cttcgagccc cgcgatcagc cgcagcagcg
     6241 tggtcttgcc gcatccggac ggaccgacga agacgacgaa cgatccgtcc tcgatatcga
     6301 ggttggcgtc gtggatgacg gcgtattttc caaacgattt ccgcacgcct tcaagtgtga
     6361 tccggcccat ggctgtcctg ctggtgtacg tctgtcccgc tctcttttcg ctacttgacg
     6421 gctccgaagg tcaacccgcg gacgagctgg cgctggctga accagccgag gacgagaatc
     6481 ggcgcgatgg cgagcgtcga cgccgccgaa agcttggccc agaagaggcc ctccgggctc
     6541 gaatacgacg cgatgaagac tgtgagcggc gccgccgcgg aggtcgagag attgagcgtc
     6601 cagaacgcct cgttccaggc caggatcacg ttcagcagca gcgtcgaggc gatgcccggc
     6661 aacgccatcg gggtgagcac gtagatgagc tcgcggccca cggtcgcccc atccatccgc
     6721 gccgcttcca gtatgtctct gggaatttcc ttgaagtagg tgaagagcat ccacaccaca
     6781 atcggcaggt tgccgaggca cagaacaatg atcaggccgc cgcggctatc gagcaggccg
     6841 aaggtgcggt agagcagata aatcggcacc agtaccccga ccggcggcat catctttgtc
     6901 gacagcatcc acagcaggac gtcgcgcgtg cgcttcgtcg gagcgaatgc catcgaccag
     6961 gcggcgggga tggcgatcag cagcgcgatc agcgtcgagc cgccggcaat cacgatcgag
     7021 ttgatggcgt gatggagata gtcgctgcgc tcctggacgg cggcgtagtt ctccgtcgtc
     7081 caatgaaaga acagaaacga cggcggaatg gcgaacgcct cgagctcggt cttgaagctc
     7141 gcgagcacca tccagagaat ggggaagaag atcacgaatc cgacgatcca ggccgcgacc
     7201 gtcgtcacca gtttgtgcgt ggtggaaact cttctggcca tcgttctcaa gcatccaggt
     7261 tgcggccaac gatgcggacg aggaagaagg cgacgatgtt ggcgatcatc acggcgacca
     7321 ggccgccggc ggaagcggtg ccgacgtcga actcgatcag cgcctgcagg tagatcagga
     7381 aggcgatatt ggtcgttgcc aggccggggc cgccgccggt ggttacgaat atctcggcga
     7441 agacggtgag tagaaagatc gtctcgatca ggatgacgac tgtgatcggg cgggcgaggt
     7501 gcggcagtgt gatgtagaag aaggccgaga ccgccccggc gccgtccatc tccgccgcct
     7561 ccttctgctc ttcatcgagc gactgcaggg cggtgagcag gatgagcgtg gcaaacggca
     7621 gccactgcca agccacgatc aggatgatcg ccaacagtgg cgcgtcggta aaccagtcga
     7681 tcggggtgag gccgagtgac gtcgccagga aggcaaacag cccggacacc gggtgcatca
     7741 agaggttctt ccacaccagc gcactgaccg tgggcatgat gaaaaacggc gcgatgacca
     7801 tcagccgcac gatgctgcgc ccgaccacgg cctggtcgag caggatggcg attagcgtcc
     7861 ccagcacgat cgtgatcgcc agcaccgatc cgaccagcag cagggtattg cgcatcgagt
     7921 agagaaacgc cgggtcggtc aggaagtagt aataattgtc gaggccgatg aatgcttccg
     7981 tcccgggatt gagcagggtg tagtgcaggg tcgagaaata gatcgtcatc gccaagggaa
     8041 cgatcatcca aatgaacagc agcgcgacgg ccggcgtgag cgccagtcgg ccgacgcgct
     8101 gtgtctcctt ggtcaccgcg gctaacccgt cgcttcagcc gcgtggctta cttgatgtag
     8161 cccgcgcgct tcatttcgcg ctcggtctgc gcctgtgccg ccgccagggc cgcgtcgacc
     8221 gacgtggtac cggcgagcgc cgcagagaac tgctggccga cggcggtgcc gatgccctgg
     8281 aattccggaa tggcggcgta ttgcacgccg acatacggca ccggcttgac cgtcgggtgg
     8341 ttggggtccg ccgagtcgat cgattcgagc gtcagcttcg cgaacggagc ggatttctga
     8401 tactccgcgt tctgatagag cgaggagcgc gttcccggag gcacccgcgc ccagccttcc
     8461 ttggaagcga cgagctcagc gtattccttg cttgtcgccc aggcgatgaa cttctcggcc
     8521 gcctcgacct tcttcgagcc ggcgggaatg gcgaggttcc aggcccagag ccagttcgcg
     8581 ttctttccca ggccgttgtt tggcgcgagc gcgaagccga cattggcagc gacctgggac
     8641 tgcttcggat cggtgacgaa agacgcggca accgtcgcgt cgatccacat gccgcatttg
     8701 ccggcgttga acagagccag attttcgttg aagccgttcg agctcgcccc cggagggccg
     8761 gcgtcatgca tgaggttgac gtaggtggtc agcgttgtct tccattccgg gctgttgaac
     8821 tgcggctgcc acttctcgtc gaaccagcgc gcgccgtagg aattggccat ggcggtgagg
     8881 aacgccatgt tctcccccca gccggctttg ccgcggaggc acacaccgta gattccggcg
     8941 gatttgtccg tgatcttctt cgctgcgtcg atgacgaaat cccaggtcgg tgcattcggc
     9001 atcgccagcc cggccttctt gaacaaatcg gtgcggtaca tcgtgaacga gctctccccg
     9061 tagaatggcg cggcgtagag cttgcctccg accgtgtcgg cgtcgcgaat cttcggcaga
     9121 agatcgccgg cgtcatagct cgcgccgagc ttgtcgagcg ggaccagcca attctgcttg
     9181 ccccagatgg gcacctcgta cgtgccgatg gtgagaacgt cgaactgacc gcccttggtg
     9241 gcgatgtcgg tggtgacccg ctggcgcaga acattctcct ccagcgtgac ccagttgacg
     9301 gtgatgtccg ggttcttggc ggtgaagttg ctggtcaggc cctgcatgcg gatcatgtcg
     9361 ccgttgttga ccgtcgcgat ggtcagcgtg gtctgggcga agcatggggc ggcggcgaag
     9421 agggataacg cgcccgcaag ggcgccgatg cggtgcttca ctgactcctc cctggctgct
     9481 gtgagcgtat gcccaacgta tgatcatatg ctcacaccgg cgtttcgggc tgtcaagagc
     9541 ctccgcagac cccgccgcgc gtgggatgtt gctcgccgca aatgagaccg ggccggtctc
     9601 agcgcgcgag gagcgccttc gcggtcgcct cgtcggtgat cagcccgttg atgagccggc
     9661 ccctgagcgc ggcgaggatc gccggaattt tcgccgggcc gagcgccgcc gcgacggtga
     9721 gcatcgccgc cggtgacgga tgaggcacgc tggtaagccg cagattagtg cttccattga
     9781 tgaaacggcc ggcggtatcg aaggcc
//
LOCUS       DATMQB010000017         2351 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1554926, whole genome shotgun sequence.
ACCESSION   DATMQB010000017 DATMQB010000000
VERSION     DATMQB010000017.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2351)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2351)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2351
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1554926"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(172..714)
                     /locus_tag="VNY79_00625"
     CDS             complement(172..714)
                     /locus_tag="VNY79_00625"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HWX70980.1"
                     /translation="MRVEDFMTRRVVTITPDTTLLAAAKLMLEHRVGGLPVLDASARM
                     IGVFSEGDLLREEGKGEDGSPWLQMMVGPDGKPAEPPRLDARKVGDVMTRQLITIAPG
                     ASIAQACRLVHEHRLRRLPVVENDKLVGMIARADLVRAVAMSAEKASPAPVRDVSVDA
                     RLAELEWQIWRNRARVVRPF"
     gene            complement(1027..1935)
                     /locus_tag="VNY79_00630"
     CDS             complement(1027..1935)
                     /locus_tag="VNY79_00630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0001216 - DNA-binding transcription
                     activator activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HWX70981.1"
                     /translation="MSDRLRELTAFVRAGETGSFSRVARELGVSQPSISRMVASLEAR
                     LGVKLLLRTTRHVAPTDAGRVFLERARQILGDLDNAENAARGADGLRGTLRVALSGAF
                     GIREVIPRLPGFAEQHPKLGIELLVSDGTEDLIAEGADMALRLGPLTDSGFGARLLGK
                     APRLAVASPAYLARRGTPQTPADLAAHDCILGPGLSGRTGWSFTRSGRATSATVEGPI
                     KVASADGVVACAKAGLGIALASRWMCRAELEAGELVAILSNYQLDWVELHAVYPGGRR
                     PALKVRAFSDYFAAQLMQKNEGGSSG"
     gene            complement(2141..>2351)
                     /locus_tag="VNY79_00635"
     CDS             complement(2141..>2351)
                     /locus_tag="VNY79_00635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX70982.1"
                     /translation="VRRAERKYAGVVDQDVDIAASQLDGLSRDRTGARSVAKIGRDEI
                     GFPPAARISAIVFSPRSTLRPTTMT"
BASE COUNT          425 a          778 c          771 g          377 t
ORIGIN      
        1 ccgtcctcgt tggcggcgcc ttcgatctga tagctcgagg tggcgacgcc ccaggtgaag
       61 cgggaccggg ctgtggcgga agcggggccg gcgttcatgg catggacctg atcatggatc
      121 gagtggtgcc gatgcagcgg acgccgcatc gcaggaaact aacaagaatg gtcaaaacgg
      181 ccttaccacc cgtgcgcggt tgcgccagat ctgccattcc agttcggcta ggcgcgcgtc
      241 gacgctgaca tcgcgcaccg gcgccggcga agctttttcg gccgacatgg ccacagcgcg
      301 cacaagatcg gcgcgcgcga tcatgccgac gagtttgtcg ttctcgacca ccggcaatcg
      361 cctgaggcgg tgctcatgca ccagccggca ggcttgcgcg atcgatgcgc caggcgcgat
      421 ggtgatcagc tggcgcgtca tgacgtcacc gacctttcgc gcgtcgagcc ggggcggctc
      481 ggcaggcttc ccgtccggtc cgaccatcat ttgcagccat ggcgagccat cctcgccctt
      541 cccctcctcg cgcagcagat cgccctcgct gaagacgccg atcatgcggg cagacgcgtc
      601 cagcaccggc aggccgccga cacgatgttc cagcatcagc ttggccgccg cgagtaaagt
      661 cgtgtcgggc gtgatcgtaa ccacccggcg cgtcatgaag tcttcaaccc gcatgttcgc
      721 tctccggcat gggctgattt tatcaacggt tatttgacga tgtccatccg ccagccgagc
      781 ccgagcgcga cggccgccgc caagttaatc gcgacttgta ggatggaaag agtcatttcg
      841 aacgcaaacg ccggggccgg ggccggcccc gtgacctcgc aaagcgcgag gccattctgg
      901 atgcggccta tgccctcttc cttgagcgcg gcatcgcgcc gaccaccatg gggatggtcg
      961 ccgagcgcgc ataaacagcg cccgcacgcc agcggacggc agggtcaaga tgatggtgcg
     1021 cgggcctcag ccgcttgagc cgccttcatt tttttgcatg agctgagccg caaaataatc
     1081 ggaaaaggct cgtaccttga gagcgggtcg acggccgccc gggtagacgg cgtgcagctc
     1141 gacccaatca agttgataat tggaaaggat cgcgacgagt tccccggcct cgagttcggc
     1201 ccggcacatc catcgagagg cgagcgctat tccaagcccc gctttggcgc aggcgacgac
     1261 gccgtcggct gaggcgacct taattggccc ttccacggtt gcggacgttg cccgccccga
     1321 gcgcgtgaaa ctccagccgg tgcggccgga gagacccggt ccgagaatgc agtcgtgcgc
     1381 ggcgaggtcg gcgggggttt gcggcgttcc ccggcgcgca aggtaggcag gcgaggcaac
     1441 tgcgaggcgc ggagccttgc ccagcaatcg cgcgccgaat ccagaatcgg tcagcgggcc
     1501 cagccgcagg gccatatcgg cgccttcggc gatcagatcc tcggtcccgt cggacaccag
     1561 cagctcgatg cccagtttcg gatgctgctc cgcgaagcca ggcagacgcg ggatgacttc
     1621 acgaattccg aatgcccccg acagcgccac ccgcagcgtg ccgcgcaagc cgtctgcgcc
     1681 gcgcgcggca ttttcggcat tgtcgagatc gccaaggatt tgccgcgccc gttcgagaaa
     1741 cacccggccg gcgtcggtcg gcgcgacgtg ccgcgtggtg cgcaagagca gcttcacacc
     1801 cagccgcgcc tcgaggcttg cgaccatccg cgatatcgac ggctgcgaca ccccgagttc
     1861 gcgcgcgacg cgggagaagc tgccggtctc gccggcgcgg acgaaggcgg tcaattcccg
     1921 gagccggtca ctcatgcacc gggcgtataa gtcagatacg cggcgcccgt ctactgcgcg
     1981 cgccccttcg acgtcatttc tgctgcagcc cggccgggag tttcggcggc cgaatggaac
     2041 gagagaagga gcgcaccaat gacgacgaca gccctctcat caccggagcg accagcggaa
     2101 tcggccgcgc ggcagccgac aaactggcgc agtcaggcgt tcatgtcatc gtcgtgggcc
     2161 gcaacgtgga acgcggtgaa aagacgattg ccgagatacg ggcagcgggc ggaaagccga
     2221 tttcatctcg tccgatcttc gcgacgctgc gagcgcccgt gcggtcgcga gaaaggccgt
     2281 cgagctggga ggcggcaatg tcgacatcct gatcaacaac gccggcatat ttccgttcgg
     2341 cccgacgcac g
//
LOCUS       DATMQB010000018        13420 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1865582, whole genome shotgun sequence.
ACCESSION   DATMQB010000018 DATMQB010000000
VERSION     DATMQB010000018.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 13420)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13420)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13420
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1865582"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..331
                     /locus_tag="VNY79_00640"
     CDS             <1..331
                     /locus_tag="VNY79_00640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HWX70983.1"
                     /translation="LVDVILVVGAKNSSNSNRLREIGHEVGTPCYLIADGSEVEPDWF
                     NGANTVGITAGASAPEVLVEDVIDALRRLGPVEVSELTGRQETIEFRLPPELTDGITA
                     SRATAKV"
     gene            374..1537
                     /gene="hpnH"
                     /locus_tag="VNY79_00645"
     CDS             374..1537
                     /gene="hpnH"
                     /locus_tag="VNY79_00645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009800066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosyl-hopene transferase HpnH"
                     /protein_id="HWX70984.1"
                     /translation="MGVSLRQKAVVGSYVLKQRLAGRKRYPLVLMLEPLFRCNLACFG
                     CGKIDYPDAILNKRLSVKECLDAVDECGAPMVAIPGGEPLIHKEIGEIVKGIVARKKF
                     VSLCTNALLLEKKLHLFEPSPYLFFSVHLDGLKEHHDKSVCMEGGFEKAVAAIKAAKA
                     KGFAVNVNCTIFDGHPAEDIAAFLDLTEELGVGVSISPGYAYERAPDQAHFLNRRKTK
                     ELFRNVFALGKGKKWNLTHSDMFLDFLAGNQEFHCTPWGMPTRNIFGWQKPCYLLGEG
                     YAKTFAELMETTDWDAYGTGRYEKCANCMAHCGYEATATEATAQRPLAALALAWRGVK
                     TEGPMAPEIPLANQRPAQYVFDGQVQQRLSEIRANETREKSAKEAARTAASAA"
     gene            complement(1620..3596)
                     /gene="shc"
                     /locus_tag="VNY79_00650"
     CDS             complement(1620..3596)
                     /gene="shc"
                     /locus_tag="VNY79_00650"
                     /EC_number="5.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051007 - squalene-hopene cyclase activity
                     [Evidence IEA];
                     GO_process: GO:0019746 - hopanoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene--hopene cyclase"
                     /protein_id="HWX70985.1"
                     /translation="MRAATPHPLQREHPGGIEDTLEPRIEAATQALLACQRPDGHWVF
                     ELEADATIPAEYVLLRHYLGEPVDAALEAKIAVYLRRIQGAHGGWPLFQDGDLDVSAT
                     VKAYFALKMIGDSVDAEHMRRAREAVRALGGAERANVFTRIMLALFGFVPWRAVPVMP
                     VEIMLLPKWFPFHLDKISYWSRTVIVPLLVLMAKKPRARNAKGIRIDELFLGPPQTLG
                     PTPKAPQQKASWFWFFRGVDNALRATEPYFPGRLRQRAIDRAVAWVGERLNGEDGLGA
                     IFPAMANSVMMFAVLGYPEDHPQRAIARRSVEKLLVVHEQEAYCQPCVSPIWDTGLTC
                     HALLEAGGERAVAQVKRGLDWLLPKQILDVRGDWIARRADIRPGGWAFQYANAHYPDV
                     DDTAVVAMAMDRLQGPTGKAYSAAIGRAREWIVGMQSENGAWGAFDADNEYDYLNNIP
                     FADHGALLDPPTEDVTARCLSMLAQFGETAANSTAVARAVDYLRRTQLADGSWYGRWG
                     MNYIYGTWSVLCALNAAGIDPGAPEMRKAADWLIAIQNDDGGWGEDGSSYKLDYRGYE
                     RAPSTASQTAWALLGLMAAGAIDHPAVGRGIAYLVAAQGADGFWNEPRYTATGFPRVF
                     YLRYHGYSSFFPLWAMARYRNLRRGNTRAVTHGM"
     gene            complement(3623..4870)
                     /gene="hpnE"
                     /locus_tag="VNY79_00655"
     CDS             complement(3623..4870)
                     /gene="hpnE"
                     /locus_tag="VNY79_00655"
                     /EC_number="1.17.8.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxysqualene dehydroxylase HpnE"
                     /protein_id="HWX70986.1"
                     /translation="MSGTVHIVGAGLAGLSAAVRLLSRGTQVVVHEATAFAGGRCRSY
                     HDAAVGMTIDNGNHLLLSGNHAALDYVRSIGAEHRLAGPPTAEFAFADLASGKRWTLR
                     FNDGRIPFWVFDSSRRVPGTAVLDYVPLARLLWAPAGKAVGEVIRCEGLLYERLVEPL
                     LLAALNIDPPLGAARLASAVIRETLALGGRACRPLIARDGLGATLVEPALALLRQRGV
                     KVLMEHQLRAIRFADGAVAALDFGDETVALGAGDGVVLAVPPYAAASLVNGLEAPSEF
                     RAIVNAHFRIDPPADAPLILGVLNGTVQWVFAFPGRLSITISAGDRLIDAPREQLAAA
                     IWGEVARVTGLSVSLPPWQIVRERRATFAATPAQDGKRPGGRTQWRNLVLAGDWTDTG
                     LPATIEGAIRSGNYAADLIAKQP"
     gene            complement(4871..5698)
                     /gene="hpnD"
                     /locus_tag="VNY79_00660"
     CDS             complement(4871..5698)
                     /gene="hpnD"
                     /locus_tag="VNY79_00660"
                     /EC_number="2.5.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016767 - geranylgeranyl-diphosphate
                     geranylgeranyltransferase activity [Evidence IEA];
                     GO_process: GO:0016117 - carotenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="presqualene diphosphate synthase HpnD"
                     /protein_id="HWX70987.1"
                     /translation="MNEPEPTPAAERASRSSFYTAMRILPRTQREAMFEIYSFCRAVD
                     DIADDLGPGDPRRAQLQQWRSDIDAVYSGAAPPPLAALAQAVREFDLKREDFIAIIDG
                     MEMDVVADIRAPDRATLDLYCDRVACAVGRLSVRVFGMTPDAGSSLAHHLGCALQLTN
                     ILRDLDEDAALGRLYLPREALQAAGIAATDPAVVLARPAIAEACNAVVAMAKAHFREA
                     EAIMAKNPRRVVRAPRIMGEAYRAILDALIARGFAPPRAAIRLPRAKLIFIVLRNLF"
     gene            complement(5699..6580)
                     /gene="hpnC"
                     /locus_tag="VNY79_00665"
     CDS             complement(5699..6580)
                     /gene="hpnC"
                     /locus_tag="VNY79_00665"
                     /EC_number="2.5.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004311 - farnesyltranstransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="squalene synthase HpnC"
                     /protein_id="HWX70988.1"
                     /translation="MMDADGLRSGKGHRDENFPVASWLIHPRHRKVILAFYNFVRAAD
                     DIADHAELAPGEKLNLLTRLDGGLTGANREDVAAVRLRAALAERGLSPKHAQDLLAAF
                     KLDVTKLRYRDWDELIGYCSLSAMPVGRFVLDVHGESRATWPANDALCAALQIINHLQ
                     DCRPDYLNLNRVYIPLNALAASGAAIESLSEPRAPPALLTCLHRLAERTERLLSESDV
                     FPAQINDWRLALEVSVINTLAHRLTRLLKARDPLRDRVHLRPPAVAALTIAGVLRGAS
                     RRAGRRLLAPSQKPRGA"
     gene            complement(6577..7737)
                     /locus_tag="VNY79_00670"
     CDS             complement(6577..7737)
                     /locus_tag="VNY79_00670"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HWX70989.1"
                     /translation="MANDLLASMVLAVWLYLLAGRGGFWLGRQHDDEVRAGQGPWPTV
                     AAVIPARDEAESVGQTISSLLRQDYPGEFTVILVDDQSRDATGEVARVAAVALGAADR
                     LTVLPGRPPPAGWTGKLWAQHQGIELAETAPHPPVYLLLTDADIVYAPDALTRLVVRA
                     QSGGYALTSLMAKLRCESFAERAFVPAFIFFFQMLYPFAWANDPRRSTAAAAGGCMLV
                     RDEVLRQAGGIAAIRGALIDDCALAKKLKAHGPIWIGLTECVRSIRAYPVVADIRRMV
                     ARTAYAQLDYSPLLLAGTVLGLTITYIAPVALALFATGAAQVLGILAWLAMAVAFQPT
                     LRFYRMSPARGPALAAIAAIYMAFTIDSAYQHARGRGGMWKGRAQANVSELR"
     gene            7887..8822
                     /locus_tag="VNY79_00675"
     CDS             7887..8822
                     /locus_tag="VNY79_00675"
                     /EC_number="2.5.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004337 - geranyltranstransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008299 - isoprenoid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="farnesyl diphosphate synthase"
                     /protein_id="HWX70990.1"
                     /translation="MNAKSSPFLSRLDATAKDTEDLLDRLLSPAPAAGEISRPARLIE
                     AMRYSSLGGGKRFRPFLVVESAALFAVPRRQALMAGAALECVHCYSLVHDDLPAMDDD
                     ALRRGQPTAHKKFDEATAILVGDGLLTLAFDILSRSETHPDPAVRTSLVSALACAAGL
                     GGMVGGQMLDLAAEGRFDGGGPRQLGEKEVRTLQAMKTGALLRFACQAGGILGSATEP
                     QRDALERYGSAVGQAFQIADDLLDLEGDPALVGKSTGKDAVAGKATMVGALGSAGARA
                     RLQQLVAEAEQAVAPFGAGGAILAEGARFVADRHA"
     gene            9003..10286
                     /locus_tag="VNY79_00680"
     CDS             9003..10286
                     /locus_tag="VNY79_00680"
                     /inference="COORDINATES: protein motif:HMM:NF013862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HWX70991.1"
                     /translation="MPMPTRWLTRASAALLSASFLVSLVAFAPLGAEAQAAAKATARV
                     KASAQSSAGKKEPATAQPQLPPRIPFTAAEDAVAAIPGIPEARFWGDTEADFKNALPA
                     QPGPWLILSSGGEDGAFGAGLLNGLTAAGKRPEYSVVTGVSTGALIAPFAFAGPRYDD
                     ALRDAFTKVTAADIYEAGRSGESFVDSWPLRDFIAKEITPELFADVATAHRSGRRLFV
                     ASYNLDAERPVIWNMGAIAAHGGKDALDLFRSVLLASTAIPGGFPPVLVDVEADGKRF
                     QEMHVDGGLGGQLFVAPAPLMESTSDYRVPATELYIVVNSGLERDFKVVERFAPSILT
                     QAVGAAVKVDTRLMLDRALIVAKRSGVPFNVATIPANFSAPSKGPFDPGYMGPLFQTG
                     YDLGKSQSPFKTQPPPYPAQAVSPSNHIEKTGANQ"
     gene            10283..10663
                     /locus_tag="VNY79_00685"
     CDS             10283..10663
                     /locus_tag="VNY79_00685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX70992.1"
                     /translation="MSHFLRPILAASFAASLVALPSAPSDAARRSSAYDGQWSVVIYT
                     TYGDCDRSLRYSLQIIGGQIVSAQQNYQLAGAVAANGSIRVTVAEAGRSASGSGRLVG
                     NNGSGQWRTSTGQCAGQWTAVRRG"
     gene            complement(10680..11690)
                     /locus_tag="VNY79_00690"
     CDS             complement(10680..11690)
                     /locus_tag="VNY79_00690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HWX70993.1"
                     /translation="MQIDALGYVGIQTADLEQWATYGTRFLGMQLVGKSHGTLALRMD
                     DRKQRVIVHAGEGEGVSFYGWEVAGAAALERLAAHLEKSGVNVVRGSRALADERRVKD
                     LIIFSDPIGNRLEAFHGAETALEPFKPGRSISGFRTGPLGMGHAVLTVERLDDVAPFY
                     TDVLGFQLSDYILRPFKAYFFHVNPRHHSLAFITTGKNGIHHLMVELCYLDDVGQAYD
                     LALRQPETIGTTLGRHTNDQVTSFYSWSPSKFLVEYGWGGRSIDPEGWTPHERVDGPS
                     LWGHDRMWLTPEGREEARNLRIGVAEAGGRVPLHVMDGNYLRARDVCPWWDANVATRQ
                     TG"
     gene            complement(11741..12646)
                     /locus_tag="VNY79_00695"
     CDS             complement(11741..12646)
                     /locus_tag="VNY79_00695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007592417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX70994.1"
                     /translation="MSPTTAKTETLNVCLGTYPHTRALKNGEIRSEAVTLRFTEVEPI
                     NKAFFMMAREQKFDVSEMAIVTYLQAKAYGKPLTLLPATMMGRFQQGALLHNSERGTL
                     RPHDLPGRRVGVRSFAQTTGVWLRGILWKDYGLDPGRIRWVTFEDAHVAEFRDPAGVE
                     RAAAGKDMTKMVLDGELDAAIFGGALPTDPRLKSVIPDPEGAGKEWYEKHGIVPINHM
                     VAVREGLSRSNPGAVREVFRMLLAGKKAAGLPKAGALDFVPFGLEAVKPALELMSAYA
                     LEMKITPRRVSFEEMFDDTTRALRA"
     gene            complement(12837..>13420)
                     /locus_tag="VNY79_00700"
     CDS             complement(12837..>13420)
                     /locus_tag="VNY79_00700"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HWX70995.1"
                     /translation="VIRASVEQQLGGKVTFDWDPRGLQCTLSIPHAEPISRPEPKPAR
                     ERVDNGSGQARMAASRRVLLVEDEALVAMMIQQCLIETGHSIVGPISTASEALVTAKD
                     GDFDAAILDINLSDGMAYPVAEILSARGIPFIFVTGFEADAVDDRFSKVPILQKPIER
                     QMLQKIFLPKNAKGNVVSGGKEPALGESASPAP"
BASE COUNT         2310 a         4396 c         4507 g         2207 t
ORIGIN      
        1 gctggtcgac gtcattctcg tggtcggcgc caagaacagc tcgaactcca accggctgcg
       61 ggagatcggg cacgaagtcg ggacaccgtg ctatctgatc gccgacggca gcgaggtcga
      121 gccggactgg ttcaatggcg ccaataccgt cggtattacc gcgggcgctt cggcgcccga
      181 ggtgctggtc gaggacgtga tcgacgccct gcgccggctg ggtccggtcg aggtcagcga
      241 gctgaccggg cggcaggaga ccatcgagtt tcgattgccg ccggaattga ctgacggcat
      301 cacggccagc cgggcaacgg caaaagtcta ggtcgagcgc cgtcctcgca caggctgaca
      361 gaaggaaaag atcgtgggtg tatcgttacg acagaaggcc gtcgtcggct cttacgtact
      421 caagcagcgc ctcgcggggc gcaagcgcta cccgctcgtg ctgatgctgg agccgctgtt
      481 ccgctgcaat ctcgcctgtt tcgggtgcgg caagatcgac taccccgacg cgatcctgaa
      541 caagcgactt tcggtaaagg aatgcctcga cgccgtcgac gagtgcgggg cgccgatggt
      601 tgccatcccc ggcggcgagc cgctcatcca caaggagatc ggcgagatcg tcaagggcat
      661 cgtggcgcgc aagaagttcg tctcgttgtg caccaacgcg ctgctgctgg agaagaagct
      721 ccacctgttc gagccgtcgc cctatctgtt cttttccgtg cacctcgacg gcctcaagga
      781 gcaccacgac aagtcggtgt gcatggaggg cggcttcgag aaggcggtcg ccgccatcaa
      841 ggcggcgaag gccaagggct ttgccgtcaa cgtcaactgc acgatcttcg acggccatcc
      901 cgccgaggac atcgcagcat tcctcgacct cacggaggaa ctcggcgtcg gcgtttcgat
      961 ctcgcccggc tatgcctacg agcgggcgcc cgatcaggcg cacttcctca accgtcgcaa
     1021 gaccaaggaa ctgttccgca acgtctttgc cctcggcaag ggcaagaaat ggaacctcac
     1081 ccattccgac atgttcctgg acttccttgc cggcaaccag gaattccact gcacgccgtg
     1141 gggcatgccg acgcgcaaca tcttcggctg gcagaagccc tgctatctgc tgggagaggg
     1201 ctacgccaag actttcgccg aattgatgga gacgacggac tgggacgcct acggcaccgg
     1261 ccgctacgaa aaatgcgcga actgcatggc gcactgcggc tacgaggcga ccgcgaccga
     1321 ggccacggcg cagcgtccgc tcgcggcgct ggcgctcgcc tggcgcggcg tgaagacgga
     1381 agggccgatg gcgccggaaa tcccgctcgc gaaccagcgc ccggcgcagt acgtgttcga
     1441 cggccaggtg cagcagcggt tgtcggaaat ccgcgccaac gagacgcgcg agaaatccgc
     1501 caaggaagcg gcgaggaccg cggccagcgc ggcttagact cggccgcgat tgacccgcgg
     1561 cgcttttcat tgggttgcgc cgggcgcgtg ccggcgtctc gtcccgaggt caccctacgt
     1621 cacataccgt gcgtcaccgc gcgcgtattg ccgcgcctga gattgcggta gcgcgccatt
     1681 gcccacagcg gaaagaaact cgaatagccg tggtagcgca gatagaacac gcgcggaaaa
     1741 ccggtcgcgg tgtagcgcgg ctcgttccag aagccgtcgg cgccttgcgc cgccacgagg
     1801 taggcgatgc cgcgcccgac cgctggatga tcgatcgcgc ccgcggccat gaggccgagc
     1861 agcgcccacg ccgtctgtga ggccgtcgac ggcgcgcgtt cgtagccgcg atagtcgagc
     1921 ttgtagctcg agccgtcctc gccccagccg ccgtcgtcgt tctggatggc gatgagccaa
     1981 tccgccgcct tgcgcatttc cggcgcgccg gggtcgatgc cggcggcatt gagcgcgcac
     2041 agcaccgacc aggtgccgta gatgtagttc atgccccagc ggccgtacca gctgccgtcg
     2101 gcaagctgcg ttcgccgcag atagtcgacc gcgcgcgcca ccgccgtgct gttcgcggcc
     2161 gtctcgccga actgcgcgag catcgacagg cagcgcgcgg tgacgtcctc ggtcggcgga
     2221 tcgagcagcg cgccgtggtc ggcgaaggga atgttgttga ggtagtcgta ttcgttgtcg
     2281 gcgtcgaagg cgccccaggc gccgttctcg ctctgcatgc cgacgatcca ctcccgcgcg
     2341 cgcccgatgg cggcgctgta ggcctttccg gtcggaccct ggagacgatc catggccatg
     2401 gcgacgacgg cggtgtcgtc gacatcgggg taatgggcat tggcgtattg gaacgcccag
     2461 ccaccgggac ggatatcggc ccgtcgtgcg atccaatcgc cgcgcacgtc aaggatttgc
     2521 ttcggcaaca gccagtcgag cccgcgcttg acctgcgcga cggcccgctc gccgcctgct
     2581 tccagcagag catgacaggt gagcccggta tcccagatcg gcgagacgca gggctggcaa
     2641 tacgcctcct gctcgtgcac caccagaagc ttctcgaccg atcggcgcgc gatggcgcgc
     2701 tgcgggtggt cctccggata gccgagcacc gcgaacatca tgacgctgtt ggccatcgcc
     2761 ggaaaaatcg cgccgagtcc gtcttcgccg ttgaggcgct cgcccaccca ggcgacggcg
     2821 cggtcgatgg cgcgctggcg caagcgccca ggaaaatacg gctcggtcgc gcgcaaggcg
     2881 ttatcgacgc cgcggaagaa ccagaaccag gacgccttct gctgcggagc cttcggcgtc
     2941 ggtccgagcg tctgcggcgg accgagaaac agctcgtcga tcctgatccc cttggcattg
     3001 cgggcgcgcg gtttcttcgc catcagcacc agcagcggca cgatcacggt gcggctccaa
     3061 taggaaatct tgtcgagatg gaaggggaac catttcggca gcagcatgat ctcgaccggc
     3121 atcaccggta ccgcccgcca cggaacaaag ccgaacagag cgagcatgat gcgggtgaag
     3181 acgttggcgc gctccgcgcc gccaagggcg cgcaccgctt cgcgcgcgcg gcgcatgtgc
     3241 tccgcgtcaa cggaatcgcc gatcatcttg agggcgaaat aggccttgac cgtcgcgctc
     3301 acgtcgagat cgccatcctg aaacagcggc cagccgccgt gagcgccttg gatgcggcgc
     3361 agataaaccg cgatcttggc ctcgagcgcc gcgtcgaccg gctcgccgag atagtgccgc
     3421 agcagcacat actcggccgg aatggtggca tcggcctcga gctcgaacac ccaatggcca
     3481 tcgggccgct ggcaggcgag cagagcctgc gtcgccgcct cgatgcgtgg ttcgagggta
     3541 tcctcgatgc cgccgggatg ttcgcgttgc aggggatgcg gtgtcgctgc ccgcatgcgc
     3601 tgctgttcga gagtgtcatc gatcatggct gtttcgcgat gaggtcggcg gcataattgc
     3661 cggaacggat cgcgccttcg atggtagcgg gcaagccagt gtctgtccaa tctccggcaa
     3721 ggacgagatt gcgccattgg gtccgcccgc ccggacgttt gccgtcctgc gccggcgtcg
     3781 cggcgaaggt ggcgcggcgt tcgcgcacga tctgccaggg cgggagcgac accgacagtc
     3841 cggtcacgcg cgcgacttcg ccccagatcg ccgccgccag ctgttcccgc ggcgcgtcga
     3901 tcagccggtc accggcgctg atggtgatcg agagccggcc gggaaaggca aaaacccact
     3961 gcaccgtgcc gttgagcacg ccgagaatga gcggcgcatc cgccggcggg tcgatgcgga
     4021 aatgagcgtt gacgatggcg cgaaactcgg acggcgcttc gaggccgttc accagcgagg
     4081 cggcagcgta gggcgggacg gcgaggacga cgccgtcacc cgcaccgagt gcgacggttt
     4141 cgtcgccgaa atcgagcgcc gcgaccgctc catcggcaaa acgaatggcg cgcagctgat
     4201 gctccatcag taccttgacg ccgcgctggc gcagcaacgc cagggcgggc tcaacgagcg
     4261 ttgcgcccag tccgtcgcgc gcgatcagcg gccggcaagc gcgtccgccg agcgcgagcg
     4321 tctcgcggat cacggccgac gcgagccgcg cggcgccgag cggcggatcg atgttcagtg
     4381 cggcgagaag cagcggctcg accaggcgct cgtagagcaa accctcgcag cggatgactt
     4441 cgccgacggc cttgcctgcg ggcgcccaaa gaagccgcgc cagcggcaca tagtcgagca
     4501 cggctgttcc cggcacacgt cggctcgaat cgaaaaccca aaacggaatg cggccgtcat
     4561 tgaaacgcag cgtccaccgc ttgccgctcg caagatcggc aaacgcgaac tccgcggtgg
     4621 gcggacctgc cagccggtgc tcggcgccga tgctgcgcac atagtcgagc gcggcgtggt
     4681 tgccggagag cagcaggtga ttgccgttgt cgatggtcat gccgaccgcg gcgtcgtggt
     4741 aggagcggca gcgcccgccg gcgaaagcgg tcgcctcgtg cacgacgacc tgcgtgccgc
     4801 gcgatagaag ccgcacggcc gcggagagac cggcgagccc agcgccgacg atgtggaccg
     4861 ttccgctcat tcaaaacaga ttgcgcagca cgatgaagat gagcttcgca cgcggcaggc
     4921 gaatggcggc gcgcggtgga gcgaagccgc gcgcgatcaa ggcatcgagg atggcgcgat
     4981 aggcctcccc catgatgcgc ggcgcgcgca caacacggcg cgggttcttc gccatgatcg
     5041 cctcggcttc gcgaaaatgc gccttcgcca tagcgacgac ggcgttgcag gcttccgcta
     5101 tcgccggacg cgccagcacg acggccgggt cggtagcggc gatgccggcc gcctgcagcg
     5161 cctcgcgcgg cagatagagg cgcccgagcg cagcgtcttc gtcgagatcg cgcagaatgt
     5221 tggtgagctg gagcgcgcac cccagatgat gggcgagcga actgcccgcg tccggcgtca
     5281 ttccaaacac gcgcaccgaa aggcgtccca ccgcgcaagc gacccggtcg caatagaggt
     5341 cgagcgtggc gcggtccggt gcacggatgt cggcgaccac gtccatctcc atgccgtcga
     5401 tgatggcgat gaaatcctcg cgcttgaggt cgaattcgcg caccgcctgc gccagggcgg
     5461 cgagcggcgg aggtgcggcg ccgctataga ccgcgtcgat atcgctgcgc cactgctgca
     5521 attgcgcgcg ccgcgggtcg cccggaccca ggtcgtcggc gatatcgtcg acggcgcggc
     5581 agaacgaata gatttcgaac atggcctcgc gctgcgtccg cggcaggatg cgcatcgcgg
     5641 tgtagaacga actgcgggag gcgcgctcgg ccgccggtgt aggctcgggc tcgttcactc
     5701 acgcacctcg cggcttctgc gacggagcga gcagacgccg gccggcacgc cgcgacgcgc
     5761 cgcggagaac gccggcgatg gtcagcgcgg cgacggcggg cggtcgcaga tgcacgcggt
     5821 cgcggagcgg gtcgcgcgcc ttgagcaggc gggtcaggcg atgggcgagc gtgttgatga
     5881 cggagacttc gagcgcgagg cgccaatcgt tgatctgggc gggaaagacg tcgctctccg
     5941 acagcagccg ctctgtgcgt tcggcaaggc ggtgcaggca ggtgagaagc gccggcggcg
     6001 cccgcggttc gctcagcgac tcgatggcgg ccccgctggc ggcgagtgca ttgagcggaa
     6061 tgtagaccct gttgagattg agatagtccg gcctgcagtc ctgcaggtga ttgatgatct
     6121 gcaatgcggc gcacaaggca tcattggcgg gccaagtggc acggctctcg ccgtgtacat
     6181 cgagcacgaa gcggccgacc ggcattgccg aaagcgaaca atagccgatg agctcgtccc
     6241 agtcgcggta gcgcagcttg gtcacgtcga gcttgaatgc cgcaagcaga tcctgcgcgt
     6301 gtttcggaga aaggccacgc tcggccagcg ccgcgcgcag ccgcaccgct gccacgtcct
     6361 cgcggttggc accggtgagg ccgccatcaa ggcgcgtgag caggttgagc ttttcgcccg
     6421 gcgccagctc ggcatgatcg gcgatgtcgt cggcggcgcg cacaaagtta tagaacgcca
     6481 gaatcacctt gcggtggcgt gggtgaatga gccaggaggc gaccgggaaa ttctcatccc
     6541 ggtgtccctt gcccgaccgc aatccatcgg catccatcat cgcaattccg aaacgttggc
     6601 ctgggcgcgc cccttccaca tgccgccgcg cccgcgcgca tgctgatagg cggaatcaat
     6661 cgtgaacgcc atatagatcg cggcaatcgc cgccaaagcc gggcccctcg ccggcgacat
     6721 gcggtagaag cgcagcgtag gttgaaaggc gacggccatg gcgagccatg cgaggatccc
     6781 gagtacctgc gctgcaccgg tggcgaaaag ggcgagcgcc accggcgcaa tataggtgat
     6841 cgtcaggccg aggaccgttc ctgcgagcag caacggcgaa tagtcgagct gcgcataggc
     6901 ggtgcgtgca accatgcggc ggatatcggc taccaccgga taggcgcgga tgctgcgcac
     6961 gcactctgtc agtccaatcc agatcggacc gtgcgccttg agttttttcg ccagcgcgca
     7021 gtcgtcgatc aaggcgccgc ggatcgccgc gatgcccccc gcctggcgca ggacctcgtc
     7081 gcgcaccagc atgcagccgc cggcggcggc ggcggtcgag cggcgcggat cgttcgccca
     7141 ggcgaaggga taaagcatct ggaagaagaa gatgaacgcc gggacgaacg cgcgctcagc
     7201 gaagctctcg cagcgcaatt tcgccatcag cgaggtgagc gcatagccgc cggattgcgc
     7261 acgtacaaca agccgggtca acgcatccgg cgcgtacacg atatcggcgt cggtgaggag
     7321 gaggtagacc ggtggatgcg gcgccgtctc cgccagttcg attccttgat gttgggccca
     7381 tagcttcccg gtccagccag ccggtggggg tcgccccggc aggacggtga gccggtcggc
     7441 ggcgccgagc gcgactgccg cgacgcgcgc cacctcgccg gtcgcgtcgc ggctctggtc
     7501 gtcgaccagg atcaccgtga attcgccggg atagtcctgc cgaagcagcg aactgatggt
     7561 ctggccgacg ctctccgcct cgtcgcgagc cgggataacg gcagcgaccg tgggccacgg
     7621 gccctggcct gcccggacct cgtcatcatg ttgccggccc agccagaacc cgccgcgccc
     7681 cgcgagaagg tagagccaga ccgcaagcac cattgacgct aagaggtcgt tggccacaga
     7741 ttgtcccaca gttcgccttg cagcggctga cgcggcggcc gccgacgggc gggtccgcgc
     7801 ggcgggccgg tgccatcgtt atcccgcaaa ttgaaggtcg agaacaacac ctcacaggga
     7861 ggccggaagg ccgagcaacg ccgggaatga acgccaaaag cagccccttc ctgtcgcggc
     7921 tcgacgcgac cgcaaaagac accgaggatc tgttggatcg gctcctgtcg ccggcgccgg
     7981 cggccggcga gatcagccgc cccgcgcgcc tgatcgaggc catgcgctat tccagtctcg
     8041 gcggcggcaa gcgcttccgg cccttcctgg tggtcgaatc tgcggcgctg ttcgcggtcc
     8101 cgcgccggca ggctctgatg gccggagcgg ccctggaatg cgtgcattgc tactcgcttg
     8161 tgcacgacga cctgccggcc atggacgatg acgccctgcg gcgcgggcag ccgacggctc
     8221 acaagaaatt cgacgaagca accgcaattc tcgtcggcga tggtctgctg acgcttgcct
     8281 tcgacatcct gtcgcgcagc gaaacgcatc ctgatccggc ggttcgcacc agcctcgtca
     8341 gcgcgctcgc ctgcgccgcc ggcctcggcg gcatggtcgg cgggcagatg ctcgatctcg
     8401 ccgccgaagg ccgcttcgac ggcggcggcc cgcggcaact cggcgagaag gaggtccgca
     8461 cgctgcaggc gatgaagacc ggcgcgctgc tacgcttcgc ctgccaggcg ggcggtattc
     8521 tcggctccgc gaccgagccg cagcgtgacg cgctcgagcg ttatggatcg gcagtcggcc
     8581 aggccttcca gatcgcggac gatcttctcg atctcgaagg cgatccggct ctggtcggca
     8641 aatcgaccgg caaagacgca gtggcgggca aggcgacgat ggtcggcgcg ctcggcagcg
     8701 caggggcgag agcacggctg cagcagctgg tggccgaagc cgaacaggcc gtggcgccgt
     8761 tcggagccgg gggtgctatt ctcgctgaag gcgcgcgatt cgttgccgac cggcacgcct
     8821 agtcggtctg tgatgaccat cacggcaatt ccttagtggt ttggcaatag tgcagcgcga
     8881 gtgcaattga agttcgcgcc ggcccgccct atttgctccc cgtccccggg ccactcatgc
     8941 gtcgttttgg caaggaacgg acaagggccg aagctcttgt aattttggga gtttcttcaa
     9001 tcatgccgat gccgacccga tggcttaccc gtgcgtctgc cgctttgctg tcggcgtcgt
     9061 ttctggtctc cctggtggcg tttgcccccc ttggggcaga agcgcaggcg gcggcgaagg
     9121 cgacggcgcg ggtcaaggcc tccgcccaat ccagcgccgg caagaaagag cccgcgaccg
     9181 cgcagccgca actgccgccg cgcattccct tcacggccgc tgaggatgcc gtcgcggcca
     9241 ttcccggcat tccggaagcg cggttctggg gcgacacaga agcggacttc aagaacgccc
     9301 tgccggcgca gcccggcccc tggctcattc tttcgagcgg aggcgaggat ggggcgttcg
     9361 gcgccgggct gctcaacggc ctgaccgccg ccggcaagcg tcccgaatac tcggtcgtga
     9421 cgggcgtcag caccggcgcg ctgatcgcgc cctttgcctt tgccggccca cgctatgacg
     9481 atgcgttgcg cgacgcattc accaaggtga ccgcggcgga tatctacgaa gccggccgga
     9541 gcggcgagag cttcgtcgat tcctggccgc tgcgggattt cattgccaag gaaatcacgc
     9601 ctgaactctt cgccgacgtc gccaccgcgc atcgcagcgg tcgacgcctg ttcgtggcct
     9661 cctataatct cgacgccgaa cgccccgtga tctggaacat gggggcgatc gcggcgcatg
     9721 gcggcaagga tgcgctcgat ctgttccgtt cggtgctgct tgcttcgacc gccattcccg
     9781 gcggtttccc gccggtgctg gtcgacgtgg aggcggatgg caaacgcttc caggagatgc
     9841 acgttgacgg cggcctcggt ggacagttgt tcgtcgcgcc ggcgccgttg atggagagca
     9901 ccagcgatta tcgtgtgccc gcaaccgagc tctatatcgt cgtcaacagc ggcctcgaac
     9961 gcgacttcaa ggtggtcgag cgctttgcgc cctcgatttt gacccaggcg gtcggcgccg
    10021 cggtcaaggt cgacacgcga ttgatgctcg atcgcgcgct gatcgtggcg aaacgcagcg
    10081 gcgttccctt caacgttgcg accatcccgg caaacttcag cgcgccgagc aagggaccgt
    10141 tcgatcccgg ctacatgggt cccctgtttc aaactggcta cgacctgggc aagagccaaa
    10201 gcccctttaa gacccaaccg cctccctatc ccgcccaggc tgtctcaccg tcaaaccaca
    10261 ttgaaaaaac cggagcgaat caatgagcca ttttttgcgc ccgatcctcg cagcttcatt
    10321 cgccgcgtcg ctggtggcgc ttcccagtgc gccatcagat gcggcgcgcc ggtccagcgc
    10381 ctacgacggc cagtggagcg tcgtgatcta caccacttac ggcgattgcg atcgatcgct
    10441 tcgttattcg ctccagatca tcggcgggca gatcgtctcc gcgcagcaga actatcagct
    10501 cgcgggtgcg gtggcggcca acggctcgat ccgtgtgacg gtcgccgagg ccggccgctc
    10561 ggcgagcggt tccggacggc tcgttggcaa caacggcagc ggccaatggc gcacctccac
    10621 gggccaatgc gccggccagt ggactgccgt ccggcgtggc tgagcaactc gcctagccgc
    10681 tatccggtct gtcgcgtcgc gacgttggcg tcccaccacg ggcagacgtc gcgcgcacgc
    10741 aggtagttgc cgtccatgac gtgaagcggg acgcggccgc ccgcctcggc gacgccgatg
    10801 cgcaggttac gcgcctcttc ccgcccttcc ggcgtcagcc acatgcggtc gtgcccccat
    10861 aagctcggcc cgtcgacgcg ctcgtgaggg gtccagcctt ccgggtcgat gctgcggccg
    10921 ccccagccgt attcgaccag aaatttcgac ggcgaccacg aatagaacga ggtgacctga
    10981 tcgttggtgt gacggccgag cgtggtcccg atcgtctccg gctggcgcag cgccaagtca
    11041 taggcctgcc cgacatcgtc gagatagcag agctcgacca tgaggtgatg gatgccgttc
    11101 ttgccggtag tgatgaaggc aaggctgtgg tggcgcggat tgacatgaaa gaaataggcc
    11161 ttgaacggcc gcagtatgta gtcgctgagc tggaaaccaa ggacatccgt atagaacggc
    11221 gccacgtcgt cgagccgctc aaccgtgagt accgcgtgtc ccatgccgag cggaccggtg
    11281 cggaaaccgg agatcgagcg gcccggcttg aacggctcca gagcggtctc ggccccgtgg
    11341 aacgcttcaa gcctgtttcc gatcgggtcg ctgaagataa tcaggtcctt gacgcggcgt
    11401 tcgtcggcta gcgcgcgtga gccgcgcacg acgttgacgc cggatttttc cagatgcgcc
    11461 gccagccgct cgagcgcggc cgcgccggcg acctcccagc cgtagaacga aacaccttcg
    11521 ccctcgccgg cgtgaacgat gacgcgctgc ttacggtcgt ccatgcgtag cgcgagcgtg
    11581 ccgtggctct tcccgacgag ctgcatgccg agaaagcgcg tgccataggt cgcccactgc
    11641 tcgagatcgg cggtttggat gccgacatag ccgagcgcgt cgatctgcat tcgcggctct
    11701 ccttgagagg tggaatctat cactcttagg ccagctctgc tcaagcccgc agcgcccgcg
    11761 tcgtgtcgtc gaacatctcc tcgaaggaaa cgcggcgggg agtgatcttc atctcaagcg
    11821 cgtaggcgct catgagttcg agcgccggtt tgaccgcttc gaggccgaac gggacaaagt
    11881 cgagggcacc ggccttcggc aggcccgcgg ccttcttgcc agcgagcagc atgcggaaga
    11941 cttcgcgcac cgcgccggga ttcgatctcg acagtccttc tctgactgca accatgtggt
    12001 tgatcggcac gatgccatgt ttttcatacc attccttgcc cgctccttcg ggatcgggaa
    12061 tgacgctctt gagccgcggg tcggtgggca gggcgccgcc aaagatcgcg gcatcgagct
    12121 cgccgtcgag gaccattttg gtcatgtcct tgccggcggc agcgcgctcg acccctgctg
    12181 gatcgcggaa ctcggcgaca tgggcgtcct cgaaggtaac ccatcggatc cggccgggat
    12241 cgaggccgta gtccttccac agaatgccgc gcagccagac gcccgtggtt tgcgcgaacg
    12301 agcgcacgcc gacgcggcgg ccgggaaggt cgtgcggccg cagcgtcccg cgctcggaat
    12361 tgtgcagcag cgcgccctgt tggaagcgcc ccatcatcgt ggcgggcagg agggtgagcg
    12421 gtttgccata ggccttggcc tgcaggtagg tgacgatcgc catctcgctc acgtcgaatt
    12481 tctgctcgcg ggccatcatg aaaaaggctt tgttgatcgg ctcgacctcg gtgaagcgca
    12541 gggtcaccgc ctcggaccgt atctcgccgt tcttcagcgc ccgggtgtga ggataggtcc
    12601 cgaggcaaac gttcagggtt tcggtctttg ctgttgtcgg gctcatgccg gctcccctcg
    12661 ccaatggccc tgattctacg atctggcaag gcgcgaggcc agatgcgagc attcgctgcg
    12721 aagacgaggc tcgctgcgct ccaaaccgaa aggggatgag accgtgcggc gctgccgcga
    12781 tgtattccgc aaaactgtcc ggcccgctcc gatcgagccg ggagcgcgcg ccagcgctat
    12841 ggcgcgggac ttgcgctctc gcccagcgcc ggttccttgc cgccgctgac cacgtttccc
    12901 ttggcgtttt tgggcaggaa gattttttgc agcatctgcc gctcgatcgg cttctgcagg
    12961 atcggcacct tgctgaaccg atcgtccacc gcgtcagcct cgaagccggt gacgaaaata
    13021 aagggaatgc cgcgcgccga caaaatctcg gcgactggat aggccatccc gtcactgagg
    13081 ttgatgtcga ggatcgccgc gtcgaagtcg ccgtccttgg cggtcaccag cgcttccgaa
    13141 gccgtgctga tcggtccgac gatggaatgt ccggtttcga tgaggcattg ctggatcatc
    13201 atcgcaacga gcgcctcatc ttcgaccagc agcacgcggc ggctggctgc catcctggct
    13261 tgcccggagc cgttgtcgac tcgctcgcgc gccggttttg gttccggccg actgatcggt
    13321 tcggcgtggg ggatcgagag cgtgcattgc agcccgcgcg gatcccagtc gaacgtcacc
    13381 ttgccgccga gctgctgctc cacgctggcg cggatcacgt
//
LOCUS       DATMQB010000019         9426 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4346036, whole genome shotgun sequence.
ACCESSION   DATMQB010000019 DATMQB010000000
VERSION     DATMQB010000019.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9426
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4346036"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..382
                     /locus_tag="VNY79_00705"
     CDS             <1..382
                     /locus_tag="VNY79_00705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF933 domain-containing protein"
                     /protein_id="HWX70996.1"
                     /translation="GKIEAEIAVLHAGERETFLSAMDLKEAGLDRLIRAGYRLLDLVT
                     FFTAGPKEARAWTVKRGAKAAQAAGVIHTDFERGFIRAETIAYEDYVACGGEAAARDA
                     GKMRLEGKDYVVQDGDVMHFRFAT"
     gene            complement(463..765)
                     /locus_tag="VNY79_00710"
     CDS             complement(463..765)
                     /locus_tag="VNY79_00710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4282 domain-containing protein"
                     /protein_id="HWX70997.1"
                     /translation="MFGISDLFQWERFVTPTVIKVFYWLAVVISVLLGLAGAVSSLTT
                     MAFNPFVGMIFLIASVLGACMGVVIARIIAEFVLIVFRINEHLAAIRNQGSAMRHQ"
     gene            1094..1684
                     /locus_tag="VNY79_00715"
     CDS             1094..1684
                     /locus_tag="VNY79_00715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX70998.1"
                     /translation="MINHISYTALGIALLAGASAANAQTLIADQPGAVIVREQPARTV
                     ETVRTVRTVEPARTMKSHHVARRASAKVVTTTTTRTIVRDRVVRGPTVIAPAPATYSD
                     TAPAPVVADMPYSRPLYDVAPGAGLAEPAYSRPLYNVAAPVVAPAPFVGAAPAIGAAP
                     AAQSGMPIPGYRYVYEPDRILVIDPYTNIAVQAIPR"
     gene            1888..2298
                     /locus_tag="VNY79_00720"
     CDS             1888..2298
                     /locus_tag="VNY79_00720"
                     /inference="COORDINATES: protein motif:HMM:NF018527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1236 domain-containing protein"
                     /protein_id="HWX70999.1"
                     /translation="MKTHLFRSLMAIALAAAVPALIFAGVGPANAQTNEATGSTGVMN
                     PNGIPEKLELTPAQRSAIYDAVRKDKSKVAPSRFSTAVGAEVPAMIELYMLPDDILAQ
                     NPAAKFYKYTVVQDRVVLVDPTNMRIVAVIGSPR"
     gene            complement(2400..2768)
                     /locus_tag="VNY79_00725"
     CDS             complement(2400..2768)
                     /locus_tag="VNY79_00725"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71000.1"
                     /translation="MILAPLVGTALIVAVATDPLSDPTVEANLSAQQKVAATEPLVRS
                     ATECIVRAVVADPRYAKPKAHLGDLIVESMPSCVAPVRAMIDAYDRYYGKGTGEAFFM
                     GPYLDVLPRAVTERAKSATP"
     gene            2932..3351
                     /locus_tag="VNY79_00730"
     CDS             2932..3351
                     /locus_tag="VNY79_00730"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71001.1"
                     /translation="MILPTALALGAQLMLPVADSVPDLNVEQVCDGIAKQGGVTFRDP
                     AVAREKKSCIDSEMLVRAELAKQWSSFSPPDKVSCVNESRMGGESSYTELLTCLEMAR
                     DVRNMRSEAEGRGKAAAPGAPGTPGAAGTPRVGPAPK"
     gene            3384..4205
                     /locus_tag="VNY79_00735"
     CDS             3384..4205
                     /locus_tag="VNY79_00735"
                     /inference="COORDINATES: protein motif:HMM:NF024430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3891 family protein"
                     /protein_id="HWX71002.1"
                     /translation="MIIQTASPGTPRLAVMMHEHTALCAQFARAFGNDRFESLSPLDL
                     MIYVIGHHDAGWTEFDRNPVTDEKTGLPYNLVETPAEHITVTSRLSPDFNERQHPYCG
                     LISSMHSWGLYNGRYGLSNLVLIDRIPQHDRPLAARMLDGELSRQKKLKEEIGKDSRA
                     SGWLDEKKIFQNYKQLQFLDTLALYFNRVHPDARGPQTFEHVPLNAEEDITVTIQPQA
                     RGVYALAPFPFAPHAAEFAFAGRRVTPRQHEANGGWSAVLKRAPTEWERFWLVPA"
     gene            complement(4243..5112)
                     /locus_tag="VNY79_00740"
     CDS             complement(4243..5112)
                     /locus_tag="VNY79_00740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007065571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/PEP mutase family protein"
                     /protein_id="HWX71003.1"
                     /translation="MTERQRPNFRSRLARKELLVAPGVFDGISARIADQMGFEALYMT
                     GYGAVASHLGLPDAGIASYTDMVGRVKVLTDTAETPLMADGDTGYGGLLNVQYTVRGY
                     EAAGAVAIQLEDQEFPKKCGHMLGRRVVPIEDMVDKIKVAVASRDSADFLIIARTDAR
                     TTLGLDEALRRADAYAKAGADILFVESPESLEEMRTIGRSFDRPLMANMVEGGRTPLA
                     DRKTLEEVGYSIAIFPGLGFLAAGAALHKVYSYLKEHGSSVGGDTPLYKFAEFSDLMG
                     FREVTEFDKTYRR"
     gene            5234..5461
                     /locus_tag="VNY79_00745"
     CDS             5234..5461
                     /locus_tag="VNY79_00745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71004.1"
                     /translation="MSAGAGDGVDRAAALQALVADAGVNVTPAEAQALVQSLARVHGA
                     AATLLRPPSFDETVERFYRLLESDAAEGAGR"
     gene            5458..6882
                     /locus_tag="VNY79_00750"
     CDS             5458..6882
                     /locus_tag="VNY79_00750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HWX71005.1"
                     /translation="MNDPTALTLRAAVAAIARGELRAAALVEACLDRIERLQPKLNCF
                     IRVTADAAREQARAADRAVKAGQRLGSLHGVPLAHKDMFYRAGEVCSCGSKIRAGFVP
                     DHTATVLARFDAAGAVELGRLNLAEFALGPTGHNDHFGRCRNPWNPEHITGGSSSGSG
                     AAVAAGLAFGALGSDTGGSVRLPAAVCGIAGIKPTLGRVSRYGAMPLSQSLDCIGVLA
                     RSVGDCARLLSVIAGADDRDGMSSRQPVEDYERGLEDAAGSAALAGVTIGVPDRYYYD
                     GIDPEVAELLAASRALLEKRGARIVDVPVGDHGMINDLAGAVVMAEGAALHLPWLRER
                     PQDYSPQVRARLLAGVGLPATLYLQALQARSRLLDEVLRETFAKCDVLHIPVLKRPVP
                     TAAETDVGGSPAMAGVLAQIVAATRPINYLGLPGLSVPIGFTRNGLPQAMQLVGRPFR
                     EHLLFRVGAAYEAAAARRGERPPL"
     gene            complement(6908..8380)
                     /gene="hydA"
                     /locus_tag="VNY79_00755"
     CDS             complement(6908..8380)
                     /gene="hydA"
                     /locus_tag="VNY79_00755"
                     /EC_number="3.5.2.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004157 - dihydropyrimidinase activity
                     [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropyrimidinase"
                     /protein_id="HWX71006.1"
                     /translation="MSVLIKNGRIVTAVDDYRADIFVNGSQVALIGKDLAIEADKHID
                     ASGKLVIPGGVDPHTHLELPFGGTTTSDTFETGTRAAAYGGTTCIIDFAVQTRGTSTL
                     KALDTWHAKAEGKTAIDYAFHMIVTDMPQERVGEMRSLADSGVTSYKLFMAYPGALLS
                     DDGTIFRAMRKAGEDGTLVCMHAENGIVIDELVKIALAQRHVEPKYHALTRPTRLEAE
                     GVHRALAIAEVARAPVYIVHLSCYDALHELRMAQARGVMAHAETCPQYLLLDVDRYDE
                     PGFDGAKYVLTPPLREKWNHDELWGGLRSHALDVISTDHCPFCLKEQKELGRSDFSKI
                     PNGGPGIESRMSLIYHYGVSTGHISLNRFVELTSTAPAKIFGLFPKKGTIAVGSDADI
                     VIFDPAREETISAFNGRTHHMNIDYSAYEGFKVKGYTETVLSRGKVVIENGNYAGRAG
                     DGAFVKRRAYGGQYANTHANMVRDVLAPRASLGSPGRRLP"
     gene            8542..>9426
                     /locus_tag="VNY79_00760"
     CDS             8542..>9426
                     /locus_tag="VNY79_00760"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HWX71007.1"
                     /translation="MRVQQGKWSRRSFLKTTAAGVAAAGVVGNFARIAEAADGLRSIG
                     LGVSEINEIQDKATKELGFSVSGQAMGYGDMFSKMLNQNDQYEIAEGYYNDMDVMLPA
                     KVWQPIDTKKIKDWDKVTNLTKTGRLTPESSIGQGDAPYLFLWVDEQGNKVKGPSQYI
                     SMCPAFHNADSIGYNPKATGRTIESWGELLNKDFKGKVALLNVPQIGVMDAAMAIEAL
                     GLKKFGDKGNMTKPEIDFLIDYLIPLKKAGHFRAFWENFGQSVNLMVNGEVALESMWS
                     PAVAAIQAEGVPCVYAFPK"
BASE COUNT         1691 a         3023 c         3082 g         1630 t
ORIGIN      
        1 cgggaagatc gaagcggaaa tcgccgtatt gcacgcggga gagcgggaga cgtttctcag
       61 cgccatggat ctcaaggagg ctggactcga tcgtttgatc cgcgccggct accggctctt
      121 ggacctggtc accttcttca ccgcaggtcc gaaggaggca cgtgcctgga cggtcaaacg
      181 cggcgccaag gcggcacagg ccgcaggcgt cattcatacc gatttcgagc gcggcttcat
      241 ccgcgccgag acgatcgcct acgaggatta cgtggcctgc ggtggcgagg cggcggcgcg
      301 ggacgccggc aagatgcggc tcgaaggcaa ggactacgtc gtccaggacg gcgatgtcat
      361 gcacttccgc ttcgcgacgt agcggattga gcggtcggat ggatttcaga ggtcgggtgt
      421 cagagatcag aggtcaaagt atttgcttct gacctctgac cgttactgat gcctcatcgc
      481 tgatccctgg ttcctgatcg ccgcgaggtg ctcattgatg cggaacacga tgagcacgaa
      541 ttcggcgatg atgcgtgcga tgaccacacc catgcaggcg ccgagcacgc tggcgatgag
      601 gaatatcatg ccgacgaagg gattgaaggc catcgtggtg agcgacgaca ccgcgccggc
      661 aaggccgagc aggacggaaa tcacgacagc cagccaatag aagactttga tcacagtggg
      721 cgtcacgaac cgctcccact ggaacaggtc gctgatgccg aacatcgcgg cttctcccgt
      781 cggaaaaagg cgacgcgacc acgtcgctgg aattcacgct aactgagaag ctcccccctg
      841 ggcacacact gcactccgct atcccggcgg tcaatcgagg gcgtcgtatg gcgcctcggg
      901 cgcggcggtg cgccaaagaa ggccggcatt ggggtgcagc tgtggcaatt ctgcggcgtc
      961 ggaaccgaat gttagcctcc ttgccagcat ccttccggcc gttctccctg cttaggaacg
     1021 cacgaccgca ccgcgcgttg gctttgttac tcggacctgc aggttcggaa agcagcaatg
     1081 catggagctg gctatgatca accacatctc ctacacagcg ctgggtatcg cgctactcgc
     1141 cggggcatcc gccgccaacg cccaaaccct catcgcggac cagccgggcg ccgtgatcgt
     1201 cagggagcag ccggcacgaa ccgtcgaaac cgtccgcacg gtgcgcacgg tcgaaccggc
     1261 tcgaaccatg aagagccacc acgtcgccag aagagcatcg gccaaggtcg tgaccaccac
     1321 cacgacgcgc acgatcgtgc gcgaccgcgt cgttcggggg ccaacagtga tcgcgcctgc
     1381 gccggcgacc tacagcgaca cggcacccgc tccggttgtg gccgacatgc catactctcg
     1441 ccccctctac gatgtcgcgc cgggcgcggg cctcgccgaa ccggcctatt cgcggccgct
     1501 ctataatgtg gcggctccgg tcgttgcgcc cgcgccattc gttggcgcgg cccctgccat
     1561 tggcgcggcc ccggcggcgc aatccggtat gccgatcccc ggctaccgct atgtgtacga
     1621 gccggatcgc atcctggtca tcgaccccta cacgaacatc gctgtgcaag cgatcccgcg
     1681 atgaggcgcg cgacaggcgc cagggacgcg tagatacaag tcggaggcat cgcttcaggt
     1741 tgaatcgatt gccgatgagt ttctccaccg agcatgatct tttcggaaac cagtccactt
     1801 ttccgaatcg tgcgcgagga gccgagaaga ggacgcacgc gccgtcaaaa aggcggcgcg
     1861 tgcgagtttc gcgagatgag gacgttcatg aagacccatc ttttccgcag ccttatggcc
     1921 attgccctcg ccgccgccgt gccggcgttg atattcgccg gcgtcgggcc agcgaatgcg
     1981 caaacgaacg aggcgaccgg ctccaccggg gtgatgaacc ccaacggcat tccggaaaaa
     2041 ctggagctga cgccggcgca gcggagcgcg atctatgacg cggtgcgcaa ggacaagagc
     2101 aaggtggcgc ccagccggtt ttcgactgca gtcggtgccg aggttccggc gatgatcgaa
     2161 ctctacatgc tgccggacga tatcctcgcg cagaatccgg cggccaagtt ctacaaatac
     2221 actgtggtgc aggaccgggt cgtgctggtc gatccgacca acatgcggat tgtcgcggtg
     2281 atcggctcgc cgcgctgacc gcgcggcccg cttcgtttcc gcttgtcccc gcgcaaaact
     2341 tactcgcggc gcatcgagcg tcgagccccg ccgtcgccgc tggaagcgcg ggatatcagc
     2401 tacggtgtcg cgcttttcgc ccgctcggtg actgccctgg gcagcacgtc gagatagggg
     2461 cccatgaaga aggcctcgcc ggtgcctttg ccgtaatagc gatcgtaggc gtcgatcatc
     2521 gcgcgtacgg gagccacgca ggacggcatc gactcgacga tgaggtcgcc gagatgagcc
     2581 ttcggcttgg cgtagcgcgg gtcggcgacg acggcgcgga cgatgcattc ggtggccgat
     2641 cgcaccaacg gctcggtcgc cgccaccttc tgctgggcgg acaagttcgc ctcgaccgtc
     2701 ggatcgctca gcgggtccgt agccacggcg acgatgagcg ccgtgccgac aagcggtgca
     2761 agaatcatgc gatctccctc acccggagca ggagccatag cggggacgat cggtgccggt
     2821 caatcctcat cttgccgcag ccgcaggcgg cactgctgct tctgcgggca gcactgctgc
     2881 ttctgcggcc aacgggtgct atagtcgcgc agcgggttga ggagcacggc catgatctta
     2941 cccactgcac tagcgcttgg tgcccagctc atgctgccgg tcgccgacag cgtccccgat
     3001 ctcaatgtcg aacaggtctg tgatggcatc gccaaacagg gcggcgtcac gttccgcgat
     3061 cccgcagttg cccgggagaa gaagagctgc atcgacagtg aaatgctggt ccgtgcggag
     3121 ctggccaagc aatggtcgag tttttcgccc cccgacaagg tctcctgcgt caacgaatca
     3181 aggatgggcg gggagtcgag ctacactgaa ttgttgacct gcctggaaat ggcgcgcgac
     3241 gtgcgcaaca tgcgtagcga ggctgagggc aggggcaagg cggccgcacc gggggcgccg
     3301 ggcacgcccg gcgccgcagg aacgccccgc gttggaccgg cgccgaaata agcgggcgcc
     3361 tggcgatcgg ccgcgcggca gccatgatca ttcagaccgc atcccccggc acgccgcggc
     3421 tggcggtgat gatgcacgag cataccgccc tgtgcgcgca gttcgcccgc gcgttcggca
     3481 acgaccggtt cgagtcgctg tcgccgctcg acctgatgat ctacgtgatc gggcatcatg
     3541 acgccggctg gaccgagttc gaccgcaatc cggtcaccga cgagaagacc ggtctcccct
     3601 acaatctcgt ggaaacgcca gcggagcaca tcaccgtcac cagccggctg tcgccggact
     3661 tcaacgagcg gcagcatccc tattgcggcc tgatatcgag catgcacagc tggggcctct
     3721 acaatggccg ctatggcctt tccaatctcg tgctcatcga caggattccg cagcacgacc
     3781 ggccgctcgc tgcgcggatg ctcgacggcg aattgtcacg gcaaaaaaaa ttgaaggagg
     3841 agatcggaaa ggacagccgg gcgtcaggct ggcttgacga gaagaaaatt tttcagaact
     3901 acaagcagct gcaattcctc gacacgctcg ccctctactt caatcgggtc catcccgatg
     3961 cgcgcgggcc gcagacgttc gagcacgtgc cgctgaacgc cgaggaagat atcacggtga
     4021 cgatccagcc gcaggcacgc ggcgtctacg cgctggcgcc gtttcccttc gcgccgcatg
     4081 cggccgagtt cgccttcgcc gggcgccggg tcacgccccg ccagcacgag gcgaatggcg
     4141 gctggtcggc ggtgctcaag cgcgccccaa ccgagtggga gcggttttgg ctcgtgcccg
     4201 catagcagtt tcggcccgca tcgcgcattt cctcgtcgcg tcttaccgac gataggtttt
     4261 gtcgaactcg gtgacttcgc ggaagcccat caaatcgctg aactcggcga atttgtagag
     4321 cggagtgtcg ccgccgacgc tggagccgtg ctctttcagg tagctgtaga ccttgtgcaa
     4381 agccgccccc gccgccagga agccgagacc gggaaaaata gcgatcgaat agcccacttc
     4441 ctccaatgtc ttgcgatctg cgagcggcgt gcgaccgcct tcgaccatgt tcgccatcag
     4501 cggccggtcg aagctgcggc cgatcgtccg catctcctcc aagctttccg ggctttcaac
     4561 gaacaggata tcggcgccgg ccttggcgta ggcgtcggcg cgtcgcagcg cttcgtcgag
     4621 cccaagcgtg gtgcgcgcgt cggtacgggc aatgatgaga aagtcggcgg aatcccggct
     4681 ggccacggcg accttgatct tgtcgaccat gtcctcgatc ggcacgacac ggcggccaag
     4741 catgtgaccg cacttcttgg ggaactcctg gtcctcgagc tggatggcga cagcgccggc
     4801 cgcctcatag ccgcgcaccg tgtattggac gttgaggagc ccgccgtagc cggtatcgcc
     4861 gtcggccatg agcggcgtct cggctgtgtc ggtgaggacc ttaacgcggc ccaccatgtc
     4921 ggtgtagctg gcgatgccgg catcgggcag ccccaggtgc gacgccacgg cgccgtatcc
     4981 ggtcatgtag agcgcttcga agcccatctg atcggcgatc ctcgccgaaa ttccatcgaa
     5041 cacgccggga gcgacgagca gctccttcct cgcgagtcgc gagcgaaaat tcggtcgctg
     5101 gcgttcggtc atgctgcgcc ctccatgtat tcttgggccg catgagtcgg cggccagcac
     5161 cggcgataac gcccgttcga gtgtgctacg cgggaaaaat tgtgtacagt tctttggtag
     5221 cggagacgat ggcatgagtg cgggggcggg tgatggagta gaccgggcag cggcgctgca
     5281 agcgctcgtt gccgatgccg gcgtgaacgt gacgccggcg gaagcacagg ccctggtcca
     5341 gtcgctggcg cgcgtccacg gtgcggcggc aactcttctg cgcccgccat ccttcgacga
     5401 gaccgtcgag cgcttctacc gcctgctcga gagcgacgcc gccgaagggg ccggtcggtg
     5461 aacgatccga cggcgctgac gctgcgcgcg gcggtcgccg cgattgcgcg gggcgaattg
     5521 cgcgccgcgg cgctcgtcga agcctgcctc gaccgcatcg agcgtctgca gccgaagctc
     5581 aattgcttca tccgcgtgac cgccgacgcg gcgcgtgagc aagcccgcgc ggcagaccgg
     5641 gctgtcaagg cggggcaaag gctcggttcg ctgcatggcg ttccacttgc gcacaaggac
     5701 atgttctacc gcgccggcga ggtttgcagt tgcggatcga aaatccgcgc cggtttcgtt
     5761 cccgaccaca ccgcgacggt gctggcgcgg ttcgacgcgg cgggggcggt cgagctcggc
     5821 cgcctgaacc tcgcggagtt cgcgctggga ccgaccggcc acaacgacca tttcggccgc
     5881 tgtcggaacc cctggaatcc cgagcacatc accggcggat cctcgtccgg ctccggcgcc
     5941 gccgtcgcgg ccggcctggc gtttggagcg ctcggctccg acaccggcgg gtcggtcagg
     6001 ctgccggcgg ccgtgtgcgg catcgccggt ataaagccga cgctgggccg cgtgagccga
     6061 tacggcgcca tgccgctctc ccagtcgctc gactgcatcg gggttctggc gcgcagcgtc
     6121 ggcgactgcg cgcgtctcct atcagtgatc gccggcgcgg atgatcgcga cggcatgtcg
     6181 agccggcagc cggtggagga ttacgagcgc ggccttgaag atgcggcggg ctcggcagcg
     6241 ctggccggcg tgacgatcgg cgtgcctgac cgctactact atgacggcat tgatcccgaa
     6301 gtggccgaac tgctcgcggc gagccgcgcg ctgctcgaga agcgcggcgc gcggatcgtg
     6361 gacgtgccgg tcggcgatca cggcatgatc aacgacttgg ccggcgcggt ggtgatggcc
     6421 gagggcgccg ccttgcatct gccgtggctg cgcgaacgtc cgcaggatta ctcgccgcag
     6481 gttcgcgcgc gcctcctggc cggcgtcggc ctgccagcca cgctctatct gcaggcgctg
     6541 caagcgcgct cgcgtctgct cgacgaagtc ttgcgcgaga cattcgccaa gtgcgacgtg
     6601 ctgcacatcc ccgtcttgaa acggccggtg ccgacggccg ccgaaaccga tgtcggcggg
     6661 tccccggcga tggcgggagt gctggcgcaa atcgtcgccg ccacgcgtcc gatcaactat
     6721 ctcggcctgc ccggcctctc ggtgcccatc gggtttaccc gcaacggcct gccgcaggcg
     6781 atgcagctcg tgggccggcc gttccgcgag caccttctgt ttcgcgtcgg cgctgcctat
     6841 gaggcggccg ccgcccgacg cggcgagcgg ccgccgcttt aaccaaaacg agccgaaacc
     6901 gtcgccgtca gggcaggcgc cggcccggag agccgagcga agcgcgcggc gcaagcacgt
     6961 cgcgcaccat gttggcgtgg gtgttcgcgt actgtccgcc gtaggcgcgc cgtttcacga
     7021 aagcgccatc gccggcgcgg ccggcgtagt tgccgttctc gatcacgacc ttgccgcgcg
     7081 acagcacggt ctcggtgtaa cccttcacct tgaaaccttc ataggcgctg tagtcgatgt
     7141 tcatgtggtg ggtgcggccg ttgaaggcgc tgatcgtctc ttcccgcgcc ggatcgaaaa
     7201 tcacgatgtc ggcgtcgctg ccgaccgcga tcgtgccctt cttcggaaac aggccgaaga
     7261 tctttgccgg cgccgtcgag gtcagctcga cgaaacggtt gagcgatatg tgcccggtgc
     7321 tgacgccgta gtgatagatt aggctcatgc ggctctcgat gccgggaccg ccattcggga
     7381 ttttgctgaa atcgctgcgg ccgagctcct tctgctcctt gaggcagaac gggcagtgat
     7441 cggtcgagat cacgtcgagg gcatgcgaac gcaggccgcc ccagagctcg tcgtgattcc
     7501 atttttcgcg cagcggcggc gtgaggacgt acttggcccc gtcgaagccc ggctcgtcgt
     7561 agcgatcgac gtcgagcagc aggtattgcg gacaggtctc ggcgtgggcc atgacgccgc
     7621 gcgcctgcgc catgcgcaac tcgtgcagcg cgtcataaca gctcagatgc acgatataga
     7681 ccggcgcccg cgccacctcg gcgatcgcca gcgcacggtg cacgccttcc gcctccagcc
     7741 gcgtcggccg cgtcagcgcg tgatatttgg gttcgacatg gcgctgcgcg agcgcgatct
     7801 tcaccagttc gtcgatgacg atgccgttct cggcgtgcat gcagacaagc gtgccatcct
     7861 cgccggcctt gcgcatggcg cgaaagatgg tgccgtcgtc tgacagcagc gcacccggat
     7921 aggccatgaa cagcttgtag ctggtgacgc cgctgtcggc gaggctgcgc atctcgccga
     7981 cgcgctcctg cggcatgtcg gtgacgatca tgtggaacgc gtagtcgata gcggtcttgc
     8041 cctcggcctt ggcgtgccag gtgtcgagcg ccttcagcgt cgaggtgccg cgcgtctgca
     8101 cggcaaaatc gatgatgcag gtggtgccgc cataggcagc ggcgcgggtg ccggtctcga
     8161 aagtatctga ggttgtcgtg ccgccgaacg gcaattcaag atgcgtgtgg ggatcgaccc
     8221 cgccggggat taccagcttg ccggaagcgt cgatgtgctt gtcggcctcg atcgcgagat
     8281 ccttgccgat cagggccacc tgcgagccgt tgacgaagat gtcggcgcga tagtcgtcga
     8341 ccgcggtaac gatacgcccg tttttgatca atacgctcac tttgcgctcc ccgtggctct
     8401 ttgacaggcc cctgttctga tgtatcattc gcaaattgaa gcggcgcaca agggctttgg
     8461 cctaccgcct agccatctac tgccgctccg ggcttcaata cacacagcgc aattggctag
     8521 ttccaaccag gagagacatg catgcgcgta cagcaaggaa agtggtcgcg cagatcgttc
     8581 ttaaagacca cggcggctgg cgtcgcagcc gcaggcgtgg tcggcaactt cgcacggata
     8641 gcggaagccg cggacggact gcgcagcatc ggccttggcg tcagcgagat caacgagatc
     8701 caggacaagg cgaccaagga acttggcttc tcggtcagcg gccaggcgat gggttacggc
     8761 gacatgttca gcaagatgct gaaccagaac gaccagtacg agatcgccga aggttactac
     8821 aacgacatgg acgtgatgct gcccgccaag gtatggcagc cgatcgacac caaaaagatc
     8881 aaggactggg ataaggtcac caacctcacc aagaccggca ggctgacgcc cgaatcgagc
     8941 atcggccagg gcgacgcgcc ctacttgttc ctgtgggtcg acgagcaagg caacaaggtg
     9001 aagggaccgt cgcagtacat cagcatgtgc ccggcgttcc ataatgccga ctccatcggc
     9061 tacaatccga aagcgaccgg tcgtactatt gaaagctggg gcgaactcct caacaaagat
     9121 ttcaagggca aggtggcgct gctcaacgtg ccgcagatcg gcgtgatgga cgcggcgatg
     9181 gcgatcgagg cgctcggtct gaagaaattc ggcgacaagg gcaacatgac caagcccgaa
     9241 atcgacttcc tgatcgacta cctcatcccg ctgaagaagg ccgggcactt ccgcgccttc
     9301 tgggaaaact tcggccagtc ggtcaacctc atggtcaacg gcgaagtggc gctcgagagc
     9361 atgtggtcgc cggccgtcgc cgcgatccag gccgagggcg tcccgtgcgt ctacgcgttc
     9421 ccgaag
//
LOCUS       DATMQB010000020         2887 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2795461, whole genome shotgun sequence.
ACCESSION   DATMQB010000020 DATMQB010000000
VERSION     DATMQB010000020.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2887)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2887)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2887
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2795461"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1399
                     /locus_tag="VNY79_00765"
     CDS             <1..1399
                     /locus_tag="VNY79_00765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013527968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HWX71008.1"
                     /translation="VLFLTSPGYAEIGPELEKRGLAFAHTATPTAVLLPDGRHAILSM
                     HRQANVAAFDKLAPGDGARFAADLDRVGADAPFVFALLGGSLWSNATLKIVAREAWRR
                     GLRGLAAFFGEALGTARGWLETRYRSELIHALFAPWVLHTGLGPESAYSGQMAKVIAF
                     ALEAAGAPIVKGGAGQALAAFDRLIRDQGGEILLGADADRVLLDDKGAARGVRLADGR
                     DFEATEGVICSVTPNQLYGRFLADAKLPAGVADAVAQYRYGKGNMQIHYALRTPPKWK
                     TPALDAVALIHLTPGLDGVSKAVNEAERGMLPAVPTICLGQPAALDPSRCPEGRSILW
                     LQLPEAPRFIKGDAAGEIAPPADGHWTEAVREKYADRIEAILASHIDNFHDGVMARKA
                     YSPADLEALNVNLVGGDPYGGFCGIDQFFLWRPFRGSVNHRTPVARLHHIGASTHPGP
                     GLGGGSGFLVAQALA"
     gene            1710..>2887
                     /locus_tag="VNY79_00770"
     CDS             1710..>2887
                     /locus_tag="VNY79_00770"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HWX71009.1"
                     /translation="MENGGGWGESRVHAVSSARPALAGLPITNPFDVGGALIGGTVGC
                     NYQIANVVLGIEDDFSWTNGRGSAHDVPPFNVRATNSIKEDWMDTLRGRVGLTWGRLL
                     VYGTGGAAVANVGLSVCTSLFCVSDSQTRIGWTAGLGGEWVVWADPARTFTLKVEYLH
                     ANFGTGLFINPPVIVGNSTVVSRNVSLTEDFVRAGVNWKFATAPAPTSNMALRALKAT
                     PALPVSAWSWTGCYIGANIGGAWDKISDIRTGQGRPLPPQDYGSDKGSAFVAGDQAGC
                     DYQVGKWIVGVEGQYDWGKVNSTHVIPPFPRFSYNTTLSNFATLAGRAGYTVLPQAFL
                     YGKAGGAWTRDNLIVTIPASSGLSEFANVNFTGWTIGGGLEWLALPNVSLFAEYEFID
                     "
BASE COUNT          471 a          945 c          939 g          532 t
ORIGIN      
        1 cgtcctgttc ctgacgtcac cgggctacgc cgagatcggc cccgaactgg agaagcgcgg
       61 gctcgccttc gcgcacacgg cgacgccaac ggcggtgctg ctgcctgacg ggcggcacgc
      121 catcctgtcc atgcaccgcc aagcgaacgt tgccgctttc gacaagctcg ctcctggtga
      181 cggtgcgcgc ttcgccgccg atctcgaccg cgtcggcgcc gacgcaccct tcgtcttcgc
      241 gctgctgggc ggctcgctgt ggtcgaacgc gacgctcaag atcgttgcgc gcgaggcatg
      301 gcggcgcggc cttcgcgggc tcgcggcttt cttcggcgag gcgctgggca ccgcgcgcgg
      361 ctggctcgag acacgctatc gctccgagtt gatccacgcg ctgttcgcgc cctgggtgct
      421 gcataccggg ctcgggcccg agagcgccta ttcgggccag atggccaagg tcatcgcctt
      481 cgcgctcgaa gccgcgggcg cgccgatcgt caaaggcggc gcgggccagg cgctcgccgc
      541 gttcgaccgc ctgatccgcg accagggcgg tgagattctc ctcggcgccg acgccgaccg
      601 cgtcctcctc gacgacaagg gcgccgcccg cggcgtgcgg ctcgccgacg gccgcgactt
      661 cgaggcgacg gagggcgtca tctgttcggt cacgcccaac cagctctacg gacggttcct
      721 cgccgacgcg aagcttccgg ccggcgtcgc cgatgcggtg gcgcagtacc gctacggcaa
      781 aggcaacatg cagatccatt acgcactgcg gacgccgccg aaatggaaga cgccggcgct
      841 cgacgcggtc gcgctcattc acctcacgcc gggtctcgac ggcgtgtcca aggcggtgaa
      901 cgaggcggag cgcggcatgc tgccggcggt gccgaccatc tgcctcggcc agcccgccgc
      961 gctcgatccg agccgctgcc cggaaggccg ctcgatcctg tggctgcagc tcccggaagc
     1021 gccgcgcttc atcaagggcg acgcggccgg cgagatcgcg ccgccggcgg atggacattg
     1081 gaccgaggcg gtgcgcgaga aatacgccga ccgcatcgag gcgatcctcg cttcgcacat
     1141 cgataatttc cacgacgggg tcatggcgcg caaagcgtat tcgcccgccg atctcgaagc
     1201 gctcaacgtc aatctcgtcg gtggcgatcc ctatggcggg ttctgcggca tcgaccagtt
     1261 cttcctctgg cgcccgttcc gcggctcggt caaccaccgc acgccagtcg cgcgccttca
     1321 ccacatcggt gcctcgaccc atccgggccc gggcctcggc ggcggctcgg gatttttggt
     1381 ggcgcaggcg ttggcgtgag ccggctgacc attcggaaaa tgtgatccgg ctgcaacggt
     1441 tgcgcgaaga aagcgccggc acagccgctt ttgactcgcg gatagataca gggtctgcga
     1501 gtatgcaacc agcggctctt ggtcgccgcc tttggatatg gtcgtgacgc gcaggttgct
     1561 tgggtgggcc gtcctttcgg cgttcctcat cgtcgcacgc ttgagtcccg ctggcgcagc
     1621 ggacttgctg ctcaaggctc cgcctcacgc gccgccgatc tatagctgga ccggctgcta
     1681 tctcgagctg gaccggctgc tatctcggca tcgagaatgg cggcgggtgg ggagagagcc
     1741 gagtccacgc ggtttcgtcg gcaagaccgg ctctcgccgg ccttccgatc accaatccct
     1801 ttgatgtggg cggcgcgctg atcggcggca cggtcggctg caactaccag atcgccaatg
     1861 tggtgttggg cattgaggac gatttctcct ggaccaacgg ccgaggcagc gcacacgacg
     1921 tcccgccctt caacgtgcga gcgacgaatt cgatcaaaga agattggatg gacacgctgc
     1981 gcggccgcgt cggcctgacc tggggccggt tgcttgtcta cggaaccggt ggtgccgccg
     2041 tcgccaacgt cgggctaagc gtctgcactt cactgttttg cgtctcggat tcgcagaccc
     2101 gaatcggatg gactgccggc cttggcggcg agtgggtggt ttgggctgat cccgccagga
     2161 ctttcacttt gaaggtagag tacctgcatg ccaatttcgg cacgggcctc ttcatcaatc
     2221 cgcctgtgat cgtaggcaat tcaactgtcg tcagccgcaa cgtaagcctc accgaggact
     2281 tcgtccgggc cggtgtaaac tggaagttcg ccacagcacc cgctcctact tccaacatgg
     2341 cgctgagggc gctcaaggcc acgcctgcgc tgccggtgtc ggcatggagc tggaccggct
     2401 gttacatcgg ggcaaatatt ggcggagcgt gggataaaat ttccgacata agaactgggc
     2461 agggacgccc gctcccacct caagattatg gcagcgacaa aggaagcgct tttgttgcag
     2521 gcgatcaggc cggctgcgac tatcaggtgg ggaaatggat agttggcgtt gaaggacaat
     2581 acgattgggg caaggtcaac agcacccacg tcattccgcc atttccacgg ttcagctaca
     2641 atacgacact cagcaacttt gcgaccttgg cgggtcgggc cggttatacc gtgctgccgc
     2701 aggcatttct gtatggcaaa gctggcggcg cctggacgcg cgacaacttg atcgtcacca
     2761 ttcccgcgag ctcaggtctg tccgaattcg ccaacgtgaa tttcaccggc tggacgattg
     2821 gcggcgggct cgaatggctt gccctgccca acgtatcgct attcgccgag tacgagttta
     2881 tcgactt
//
LOCUS       DATMQB010000021         2208 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3105840, whole genome shotgun sequence.
ACCESSION   DATMQB010000021 DATMQB010000000
VERSION     DATMQB010000021.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2208)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2208)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2208
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3105840"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..707)
                     /locus_tag="VNY79_00775"
     CDS             complement(<1..707)
                     /locus_tag="VNY79_00775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008144534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX71010.1"
                     /translation="MIRTGIAAATVLAFAAGPAAAHEKTVKIGFISTFSGPPAAIGND
                     MRNSFELGLDHLGRKLGGLPVEVIYEDDQLKPEVGVQKTQKLIESDKVDFVVGYIWSN
                     VILASLKPLVDSKTMTVVTNAGASQLAGELCSPYVFSTSWNNDQTPQAMGLYMNQKGI
                     KKAFLIGPNYAAGRDMLAGVRMTFQGEVAGQEMTRWPDQLDFSAELSKARAAQPDAIF
                     AFYPGGAGVQFVTQYAQS"
     gene            967..1998
                     /locus_tag="VNY79_00780"
     CDS             967..1998
                     /locus_tag="VNY79_00780"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019173397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HWX71011.1"
                     /translation="MAQQFQFGLDTFGDITLGPDGSLLTQAEVIRNVVEEGVHADALG
                     VDAFGVGEHHRPDFAVSAPEVVLAAIAGRTQRIRLGSAVTVLSSDDPIRVFQRFSTLN
                     AASNGRAEVTLGRGSFIESFPLFGYDLSQYEELFEEKLDLFAALLRSDTVTWQGRTRP
                     PLTKQRIFPPIESGQLKAWVGVGGSPESVVRAARHDLPLALAIIGGDPKRFRPYVDLY
                     HRAFAEFGRPAKEIAVHSPGFVAATDELAREEYWPAYKGMHDRIGAERGWPPIGRTEF
                     EREVEHGALHLGTPETVARKIAATAKALGIVRFDLKYSAGTLAHDKLMRCIELYGSKV
                     IPLVRDMLA"
BASE COUNT          386 a          726 c          702 g          394 t
ORIGIN      
        1 gactgcgcgt attgggtgac gaactgcacg ccggcgccgc cgggatagaa cgcgaagatc
       61 gcgtccggct gcgccgcgcg ggccttggaa agctcggcgg agaaatcgag ctggtcgggc
      121 cagcgggtca tctcctggcc ggcgacctcc ccctggaagg tcatgcgcac gcctgccagc
      181 atgtcgcgcc cggcggcata gttgggcccg atcaggaagg ccttcttgat ccccttctgg
      241 ttcatgtaga gacccatcgc ctgcggcgtc tgatcgttgt tccaggaggt ggagaacaca
      301 tagggcgagc acaactcgcc ggcgagctgg gaagcgccgg cgttggtcac gaccgtcatg
      361 gtcttgctgt cgaccaaagg cttgagcgac gccaggatca cgttcgacca gatgtagccg
      421 acgacgaaat cgaccttgtc ggattcgatg agtttttggg tcttctgcac tccgacctcg
      481 ggtttgagct ggtcgtcctc gtagatgact tcgaccggga ggccgccgag cttgcggccg
      541 aggtgatcga gcccaagctc gaaggaattg cgcatgtcgt tgccgatggc ggccggcggg
      601 ccgctgaacg tgctgatgaa gccgatcttg accgtcttct catgggccgc ggccggtccc
      661 gccgcgaacg cgagcacggt tgcggcggcg atgcctgtcc tgatcattgc gtttcttccc
      721 tccggttggc gcgctctgcg gcgcggagca ttttcgctga tctttctcag tatcacggaa
      781 tcgccggatt ttgccctcgg ccaatcctgc taatcaagcc gcagggccac gtccaaaggc
      841 cgcggcgtcc actccaagtc accgcttccg gcccggcaac ccgggcacaa ccgctggatt
      901 ccggagtgaa tgacaatata tcggttgcca cagcgaccga atccgacgcg gacgatccca
      961 cattagatgg cacagcaatt tcaattcggc ctcgatacat tcggcgacat caccctcggg
     1021 cctgacggca gcctgctgac gcaggcggaa gtcatccgca acgtggtcga ggagggcgtc
     1081 cacgctgacg cgctaggcgt cgatgccttc ggtgtcggcg agcaccaccg gcccgatttc
     1141 gcggtgtcgg ccccggaagt cgtgctcgcg gcgatcgccg ggcgcacgca gcgcatccgg
     1201 ctcggctccg ccgtcaccgt actttcctcc gacgatccca ttcgcgtctt ccagcgcttc
     1261 tccaccctca acgccgcctc gaacggacgc gccgaggtga ccttggggcg cggctcgttc
     1321 atcgagtcgt ttccgctgtt cggttacgac ctctcccagt acgaggagct gttcgaggag
     1381 aagctcgacc tgtttgcggc cctgctcagg agcgataccg tgacctggca aggccgcacc
     1441 cgaccgccgc tgacgaagca gcgcatcttt cccccgatcg agtccggaca gctcaaggcg
     1501 tgggtcggcg tcggcggcag tccggaatcc gtcgtccgcg ccgcccgcca tgacctgccg
     1561 ctggcgctcg ccatcatcgg cggcgatccc aagcgcttcc ggccctatgt cgatctctat
     1621 catcgcgcgt ttgcggagtt cggccggccg gcgaaggaga tcgcggtgca ctcgccggga
     1681 tttgtcgccg cgaccgacga actagcgcgt gaggaatact ggccggccta caaggggatg
     1741 catgaccgca tcggcgccga gcgcggctgg ccaccgatcg ggcgcaccga attcgagcgc
     1801 gaagtcgagc acggcgcgct ccatctcggc acgccggaga cggtcgcccg caagatcgcc
     1861 gcgaccgcca aggcgctcgg cattgtgcgc ttcgacctca aatacagcgc cggcacgctc
     1921 gcgcacgaca agctcatgcg ctgcatcgag ctttacggca gcaaagtgat tccgctggtg
     1981 cgggatatgc tcgcatgacc gcatcggctt tcgcccgctg gcaagcgctt ggcaagttcc
     2041 ggcgagcctt gatgcgtgga ggccgaacat ggaagcgaag aaatacaagt ccttccggta
     2101 tacgaacaac ctgacctggg agaaagctcg ccgcggcaac acatcggcgc cgggcaagcc
     2161 gcagatggaa atcggcagcc ctcccgaatt caagggagaa ccgggcgt
//
LOCUS       DATMQB010000022         2721 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3106165, whole genome shotgun sequence.
ACCESSION   DATMQB010000022 DATMQB010000000
VERSION     DATMQB010000022.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2721)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2721)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2721
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3106165"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            17..613
                     /locus_tag="VNY79_00785"
     CDS             17..613
                     /locus_tag="VNY79_00785"
                     /inference="COORDINATES: protein motif:HMM:NF022783.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3141 domain-containing protein"
                     /protein_id="HWX71012.1"
                     /translation="MSDMIASGLEMWGNARDAATEAFFFNTYGSPIVQAMFGLRADET
                     SVSRRIGRDVAREAAAQQAAAHLEQQIDQGGLIEAAVRALIYVRLPEGKVDERGFAAL
                     RQISAELPAAKRVGFVRFKEIVKEQYLILLLDPERAIAALPKLLPNNRRQRDEALALV
                     RRVLAARGALPEEGRRRLERIEALFAGPPPEVGQDKAA"
     gene            637..1590
                     /locus_tag="VNY79_00790"
     CDS             637..1590
                     /locus_tag="VNY79_00790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015950084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HWX71013.1"
                     /translation="METKDDGPRERYDRLVHAAQQLPPVTTAVAHPCDKISIEGVVEA
                     AKLGLIAPILVGPPARIREAAEQAEADISRFPLEESAHSHDSAAKAVELVREGKAEAL
                     MKGSLHTDELMGAVVARETGIRTARRISHCFVMDVPGHKDPLIITDAAVNIAPSLADK
                     VDVVQNAIDLGHALGFQEVRVAIMSAMETVNPAVPSTIEAAALCKMAERGQITGGILD
                     GPLALDNAINEDAAAIKHIVSPVAGRANVLVVPDLEAGNMLAKSLSFLAGAAAAGVVL
                     GARVPIILTSRADSVITRLASCAVASLVAEARRRNVEAAIR"
     gene            1605..2390
                     /gene="fabI"
                     /locus_tag="VNY79_00795"
     CDS             1605..2390
                     /gene="fabI"
                     /locus_tag="VNY79_00795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018117199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004318 - enoyl-[acyl-carrier-protein]
                     reductase (NADH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HWX71014.1"
                     /translation="MPPEQTRSSILKGRTALIVGVANDRSIAWGCAEAMHRSGAEIAM
                     TYLNDRARPYVEPLASQVEASLLLPLEVRDPAQVDALFEAIASKWGRLDILVHSIAFA
                     PRQALEGRVTDCPREGFLTAMDVSCWSLLDLTRRAEKLMTEGGTIFAMTYHGANEVIE
                     NYGIMGPVKAALESAVRYLAAELGPKGIRVHAISPGPLATRAASGIPDFDALMERVAE
                     RAPARRLVTIEEVGAACVFLASHYAGAMTGDTIYIDGGYHILG"
     gene            2398..>2721
                     /locus_tag="VNY79_00800"
     CDS             2398..>2721
                     /locus_tag="VNY79_00800"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018405981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-transferase"
                     /protein_id="HWX71015.1"
                     /translation="MRRAISAAEAAVLIPDGASVMFGGFMGVGTATPVVQALVERGVR
                     GLAIIGNDTARPGVGVGRLIEAGCVARAIVSHIGTNPMTQQKMIAGEIEVELVPQGTL
                     AERIRA"
BASE COUNT          476 a          850 c          946 g          449 t
ORIGIN      
        1 cgccttcgag cacatgatgt ccgacatgat cgcgagcggg ctcgaaatgt ggggcaacgc
       61 gcgagatgcg gcgacggagg ccttcttctt caacacctac ggctctccga tagtgcaggc
      121 gatgttcggc ctgcgcgccg atgaaacgtc ggtgagccgc cgcatcgggc gcgatgtagc
      181 gcgagaggcc gccgcccaac aggcggctgc ccaccttgag cagcagatcg accagggcgg
      241 cctaatcgag gccgcggtgc gcgccctgat ttatgtgcgt ctgcccgagg gcaaggtcga
      301 cgagcgcggc tttgccgcct tgaggcagat cagcgccgag ctgccggctg ccaaacgcgt
      361 tggcttcgtc cggttcaaag agatcgtgaa ggagcaatac ttgatcctgc tattggaccc
      421 agagcgagcg attgccgcgc ttccgaagct gttgcccaac aaccgtcggc agcgcgacga
      481 ggcgctggct ttggtgcgtc gcgtcctcgc cgcgcgtggc gctctgcccg aggagggccg
      541 ccggagactc gagcgcatcg aggcattgtt cgctggtccg ccccccgagg tcggccagga
      601 caaggcggcg taggccggcg aggaatgggg cgagcgatgg aaaccaaaga tgacgggcca
      661 cgtgagcgat acgaccggct cgtgcacgca gcgcagcaac tgccgccggt gacgacggcg
      721 gttgcgcatc cctgcgacaa gatctcgatc gagggcgtcg tcgaggcggc caaattggga
      781 cttatcgccc cgatcctggt cgggccgcct gcccgtatcc gcgaggcggc agagcaggcg
      841 gaagccgaca tatcgcgctt cccgctggag gaatcggcgc acagccatga ttcggccgcc
      901 aaggcggtcg agctcgtccg ggagggaaaa gccgaggccc taatgaaagg cagcctccat
      961 accgacgagc tgatgggggc cgtagtcgcg cgggaaaccg ggattcgcac ggcgcggcgg
     1021 atcagtcatt gctttgtgat ggatgttcct ggccacaaag acccgctgat catcaccgat
     1081 gccgcggtca acattgcgcc gagcctcgcc gacaaggtcg atgtcgtgca gaacgcgatc
     1141 gacctcggcc atgcgctggg atttcaggag gtgcgcgtgg cgatcatgtc ggcaatggaa
     1201 acggtcaatc cggcggtccc gtcgaccata gaagccgccg ctctgtgcaa gatggcggaa
     1261 cgcgggcaaa tcaccggcgg gatcctcgac ggcccgctgg cgctcgacaa cgcgatcaac
     1321 gaagacgcgg cggcgatcaa gcacatcgtc tccccggtag ccggacgcgc caacgtgctg
     1381 gtggtgccgg accttgaagc cggcaacatg ttggccaaga gcctctcgtt cctcgccggc
     1441 gcggcggccg ccggcgttgt tctcggcgcc cgtgtgccca ttatcctgac cagccgggcc
     1501 gacagcgtca tcacccggct cgcgtcttgc gccgtcgcga gcctggtggc agaggcgcga
     1561 cgccgcaatg tggaggctgc aataagatga ccgagacgaa tagcatgccg cccgaacaga
     1621 cccgctcctc gatcctgaaa gggcgaacag cgttgatagt gggcgtcgcc aatgaccgct
     1681 cgatcgcctg gggatgcgcc gaggccatgc atcgatccgg cgctgagatc gcgatgacgt
     1741 atctcaacga cagggctcgc ccctatgtcg agccgttggc gtctcaggtc gaggcgtcgt
     1801 tgctgctccc gctggaggtc cgcgacccgg cgcaagtcga tgcgcttttc gaagcgatcg
     1861 catcgaagtg ggggcgcctc gacattctcg ttcactcgat cgcctttgcg ccgcggcagg
     1921 cgctggaggg gcgggtgacc gattgtcccc gcgaaggctt tctgaccgcg atggatgtgt
     1981 cgtgctggtc attgctcgac ctgacgcgcc gcgccgagaa attgatgacc gaaggcggca
     2041 cgattttcgc gatgacctat cacggcgcca acgaggtcat agagaattac ggcatcatgg
     2101 gtccggtcaa ggcggcactc gaatcagccg tgcgctacct ggcggcggag ctcggaccga
     2161 aggggattcg tgtgcatgcc atcagtcccg gccccttggc gacccgcgcc gcctccggaa
     2221 ttcccgattt cgatgcgctg atggagcgag tggcggaacg tgcgccggcc cggcgtctgg
     2281 tgaccatcga ggaggtcggc gccgcgtgcg tgtttctggc gagccattat gccggcgcga
     2341 tgacgggcga cacgatctat atcgacggcg gctatcatat cctcggctga gccagctatg
     2401 cgacgtgcaa tctctgccgc ggaggccgcc gtcctgatcc cggacggggc cagtgtgatg
     2461 ttcggcggct ttatgggcgt cggtacagcg acgccggtgg tccaggcctt ggtcgagcgc
     2521 ggggtgcggg ggctcgcgat catcggcaac gacacggcgc ggcccggggt cggggtcggc
     2581 cggctgatcg aggcgggatg cgtcgcgcgc gccatcgtct ctcacatcgg cacgaacccg
     2641 atgacgcagc agaagatgat agcgggcgag atcgaggtcg agctcgtgcc gcagggcacg
     2701 ctggcagagc gcatccgcgc c
//
LOCUS       DATMQB010000023         4359 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1556167, whole genome shotgun sequence.
ACCESSION   DATMQB010000023 DATMQB010000000
VERSION     DATMQB010000023.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4359)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4359)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4359
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1556167"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(75..1400)
                     /locus_tag="VNY79_00805"
     CDS             complement(75..1400)
                     /locus_tag="VNY79_00805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HWX71016.1"
                     /translation="MHDVNKAAMRRASLSDQAVAAARQVLAGQRGGLRAYLIFAGPAV
                     IASIAYMDPGNFATNIQAGAKYGYGLLWVVLLANLIAMLFQALSAKLGIVTGRNLAEL
                     CRDHFPPPVVWAMWVVSEIAAMATDLAEFLGGAIGLSLLFQMPLLAGMIVTAIVTYGL
                     LMFQGFGFRPIELIIGAMVSIIALCYLAEMFIAPVNWAEAAFHTFTPQLADAGALLLS
                     VGIIGATVMPHAVYLHSGLTQARMPVHDDSERRTVLRFSNQEVILALSVAGLVNMAMV
                     MMASSAFHAGHPEVAEIETAYYTLTPLLGIGAAGVFLVSLIASGVASSTVGTMAGQMI
                     MQGFIGFRIPVWVRRLVTMLPALVVVALGVNATNALVTSQVVLSIALPLPMIALLIFT
                     GRRDIMGVFVNGAVTRIGGWAATVVVLTLNFFLIVQTLGVAIPGLPDAR"
     gene            1576..2037
                     /gene="mntR"
                     /locus_tag="VNY79_00810"
     CDS             1576..2037
                     /gene="mntR"
                     /locus_tag="VNY79_00810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018067847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0046914 - transition metal ion binding
                     [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-binding transcriptional regulator
                     MntR"
                     /protein_id="HWX71017.1"
                     /translation="MANTVKGRRIGDAGKLPAEGTQARRFGKTRSAQSTALLEDYVEL
                     IADLLASAGEARPTDIARRFGVSHATAVKTIARLKRSGLATARPYRGVFLSEKGRALA
                     ERVRVRHRLVVDLLCALGVPTESAEADAEGIEHHVSETTLKAFAEFLNARR"
     gene            complement(2076..3419)
                     /gene="glmM"
                     /locus_tag="VNY79_00815"
     CDS             complement(2076..3419)
                     /gene="glmM"
                     /locus_tag="VNY79_00815"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008966 - phosphoglucosamine mutase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HWX71018.1"
                     /translation="MARKYFGTDGIRGRANGVITPELALKVGQASGLIFRRGDYRHRV
                     VIGKDTRLSGYMIETALIAGFTSVGMDVLQLGPMPTPAVAMLTRSMRADLGVMISASH
                     NPFDDNGIKLFGPDGYKLSDEVEQEIEALIDAGMSKQLAKSRELGRAKRIDGVHDRYI
                     EFAKRTLPRNLSLEGLRVVIDCAHGAAYRVAPEALWELGADLVSIGVEPDGFNINREC
                     GSTDPVALCRKVREVRADIGIALDGDADRVVIADEQGHLVDGDQLLAAIAESWSADGR
                     LAKPGVVATVMSNLGLERHLQSLNLDLVRTPVGDRYVLEYMREHGYNVGGEPSGHIIL
                     SDYTTTGDGFVAALQVLAVVKKQNKPVSQVCHRFAALPQVLKNVRYRSGKPLENSKVR
                     SAIEDAEQRLNGHGRLVVRPSGTEPVIRVMGEGDDKALLEEVVDGIVDALTDIAA"
     gene            complement(3583..3804)
                     /locus_tag="VNY79_00820"
     CDS             complement(3583..3804)
                     /locus_tag="VNY79_00820"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71019.1"
                     /translation="MMEEWNKNRSLRPDRTELAPHTEDESAKRREREAKRKQKLDEQL
                     DQGLEDTFPGSDPVAVTQPPHSARDKRRP"
     gene            3964..>4359
                     /locus_tag="VNY79_00825"
     CDS             3964..>4359
                     /locus_tag="VNY79_00825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy-acid oxidizing protein"
                     /protein_id="HWX71020.1"
                     /translation="MRTMTCIEDLRRTARRRVPRQFFEYADGGSYAEETLQANRADLE
                     RIRLRQRILVDVAGRSTRTTILGEPAALPLALAPIGLCGMQHGDGEILACRAAQEAGI
                     PFCLSTMSICSIEDVAAAVAKPFWFQLYVM"
BASE COUNT          746 a         1435 c         1437 g          741 t
ORIGIN      
        1 ttttctacgg cgacagcgtg ctgaccacgc cgcggcgtct ttgactttcg ctcacattca
       61 ctcggctcgc gcgctcatcg cgcgtcgggc aatccgggaa tcgccacccc caacgtctgc
      121 acaatgagaa aaaagttgag ggtgagcacc accacggtcg ccgcccagcc gccgatgcgc
      181 gtcaccgcgc cgttgacgaa gacgcccatg atgtcgcgcc ggccggtgaa gatgagcagc
      241 gcgatcatcg gcagcggcaa cgcgatgctg agcaccacct gactcgtgac cagcgcgttc
      301 gtcgcattga cgccgagcgc gacgacgacg agggccggca gcatcgttac cagccggcgg
      361 acccagaccg ggatgcggaa gccgatgaag ccctgcatga tcatctgccc ggccatggtg
      421 ccgacggtgg atgacgccac gcccgaggcg atgagcgaca ccaggaacac tcccgccgcg
      481 ccgatgccga gcagcggcgt cagcgtgtag taggcggtct cgatctccgc gacttcggga
      541 tggccggcgt gaaacgcgct cgacgccatc atcaccatgg ccatgttgac aagaccggcg
      601 accgaaagcg cgagaatgac ttcctggttg gagaagcgca gcaccgttcg ccgttcgctg
      661 tcgtcatgca caggcatgcg tgcctgggtc aggccggaat gcagatagac cgcatgcggc
      721 atgaccgtcg cgccgatgat gccgacggag aggagcagcg ccccggcgtc cgcgagctgc
      781 ggcgtgaagg tgtggaatgc cgcctcggcc cagttcaccg gcgcgatgaa catttcggcg
      841 aggtagcaga gcgcaatgat gctcaccatc gcgccgatga tcagttcgat cggccggaaa
      901 ccgaagccct ggaacatgag caggccgtag gtcacgatcg cggtcacgat catgccggcg
      961 aggagcggca tctggaacag cagcgaaagc ccgatggcgc cgcccaggaa ctccgccaga
     1021 tcggtcgcca tcgcggcaat ctcgctgacc acccacatcg cccagaccac cggcggcgga
     1081 aaatggtcgc gacacaattc cgcgagattg cggccggtca cgatgcctag cttggcggaa
     1141 agcgcctgga acagcatcgc gatgaggttg gcgagcaaga ccacccaaag caggccgtag
     1201 ccgtatttcg cgcctgcctg gatgttggtc gcgaagtttc ccggatccat gtaggcgatc
     1261 gaggcaatga ccgccgggcc ggcgaagatc agataggcgc gcagtccgcc gcgctgcccg
     1321 gccagcacct gccgcgccgc cgccaccgcc tgatcggaca gcgacgcgcg ccgcatcgcc
     1381 gccttgttca cgtcgtgcat gaagcaccgg cagaacagtg tagcatgagt tacatgatag
     1441 gcatgccact gattggcgtc aacagttaca tgatgtagct ttggttacaa tttgacacga
     1501 ggggaagaat atgttgtccg ctattcgacc cggcagcacc gggctggcgc aatctccagg
     1561 atcgccgcgc ggaacatggc gaacacggtc aaaggcaggc gcatcggcga tgcgggcaag
     1621 ctgcccgcag aagggacgca ggcgcgccgc ttcggcaaga cgcgctcggc gcagtcgacc
     1681 gcgctgctcg aagactacgt ggagctgatt gccgacctct tggccagcgc cggcgaggcg
     1741 cggccgaccg acatcgcgcg gcgcttcggg gtctcgcacg ccactgcggt caagaccatt
     1801 gcgcgcctca aacgcagcgg gcttgcgacc gcgcgcccgt atcgcggggt gttcctgagc
     1861 gagaaggggc gggcgctcgc cgagcgcgtg cgcgtgcgcc acaggctggt ggtcgacctc
     1921 ctttgcgcgc ttggcgttcc aaccgagtcg gccgaggccg acgctgaggg gatcgagcac
     1981 cacgtctcgg agacgacgct gaaggcgttc gccgaattcc tcaacgcgcg gcgctgaacg
     2041 ggcggcggcg cgtgggcgcg cgaagcgcgc agagatcagg ccgcgatatc ggtcagcgca
     2101 tcgacgatgc cgtcgacgac ctcctcgagc agcgccttgt cgtcgccttc gcccatcacc
     2161 cggatcaccg gctcggtacc cgacggccgc acgaccaggc ggccgtgacc gttgaggcgc
     2221 tgctcggcgt cctcgattgc cgaacgcacc ttcgagttct ccagcggctt gccgctgcga
     2281 taacgcacgt tcttgagcac ctggggcagg gcggcaaagc ggtggcacac ttgcgacacc
     2341 ggcttgttct gcttcttcac gacggcgagc acctggagcg cggcgacgaa gccgtcgccg
     2401 gtcgtcgtgt agtcggaaag gatgatgtgc cccgagggtt cgccgcctac gttgtagccg
     2461 tgctcgcgca tgtattcgag cacgtagcgg tcgccgaccg gcgtgcgcac gaggtcgaga
     2521 ttgagcgatt gcaggtgccg ctcgaggccg aggttcgaca tcaccgtcgc caccacgccc
     2581 ggcttggcca gccgtccgtc tgcgctccag ctctccgcga tcgccgccag cagctgatcc
     2641 ccgtccacca ggtggccctg ctcgtcggcg atcaccaccc ggtcggcgtc gccgtcgagc
     2701 gcgatgccga tgtccgcgcg cacctcgcgc accttgcggc aaagcgcgac cggatcggtc
     2761 gagccgcatt cccggttgat gttgaagccg tccggctcga cgccgatcga aacgagatcg
     2821 gcgcccaact cccacagggc ctcgggcgcc actcggtagg cggcgccgtg ggcgcagtcg
     2881 atgaccacgc gcaggccttc gagggacagg ttgcgtggca aggtgcgttt ggcaaattcg
     2941 atgtagcggt cgtgaacacc gtcgatgcgc ttggcgcggc cgagctcgcg gctcttcgcc
     3001 agctgcttgc tcatgccggc gtcgatcagc gcctcgatct cctgctcgac ctcgtccgag
     3061 agcttgtagc cgtccggtcc gaacagcttg atgccgttgt cgtcgaacgg gttgtgcgaa
     3121 gccgagatca tgacgccgag atcggcgcgc atcgagcgtg tcagcatcgc gaccgccggc
     3181 gtcggcatcg gtccgagctg gagcacgtcc atgccgacgg aggtgaagcc cgcgatcagc
     3241 gcggtttcga tcatgtaccc ggagagtcgg gtgtccttgc cgatcacgac gcgatggcgg
     3301 taatcgccgc ggcgaaaaat gaggccgctc gcctgcccga ccttgagcgc cagctccggc
     3361 gtgatcacgc cgttagcgcg accgcgaata ccgtcggttc cgaaatactt gcgagccatg
     3421 ttcccccgcc gcctgtctcc ttcggccggc tatattaacg ccttcgcggt ggggtgtgct
     3481 tcaaaaaatt ttcgtcaatg ttaccaagcg ccggaaccct ttgattacca tctcgcttcg
     3541 ctgtcggctg gccgcatggc ggctgcgggg ccaaggttgt cgtcaaggcc ggcgcttgtc
     3601 gcgggcgctg tgcggcggtt gggtcaccgc gacaggatcg gaaccgggaa acgtgtcctc
     3661 cagcccttga tcgagctgct catcgagctt ctgcttgcgt ttggcctccc gctcccggcg
     3721 ctttgcgctt tcgtcttcgg tatgtggcgc cagttcggtg cggtctggcc gcagcgatcg
     3781 gttcttgttc cattcttcca tcatggtggg tctcctgttc ggccgggtcg ggcgaacaac
     3841 cggctgaccg cagtgaagtc gctggcgccg ttgacaataa ctcccgggaa cccgccgcgt
     3901 tccctggccg atgcccatta agctttgtgc tatcaagggc gtgacagctg ggacggcgtg
     3961 gccatgagaa ccatgacatg catcgaggac ctgcggcgga cggcccgtcg ccgggtgccg
     4021 cggcagttct tcgaatatgc cgacggcggc tcctatgcag aggagactct ccaggccaac
     4081 cgcgccgatc tcgagcgcat caggctgcgc cagcgcatcc tggtcgatgt cgccgggcgc
     4141 agcacgcgca ccacgatcct gggcgaaccg gccgcgctgc cgcttgccct ggcgccgatc
     4201 gggctttgtg gcatgcagca cggcgacggc gagatcctcg cctgccgggc ggcgcaggaa
     4261 gcgggcatcc cgttctgcct ttccaccatg tcgatctgct cgatcgagga cgtggcggcg
     4321 gcggtggcaa agccattctg gttccagctc tatgtcatg
//
LOCUS       DATMQB010000024         8409 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3106737, whole genome shotgun sequence.
ACCESSION   DATMQB010000024 DATMQB010000000
VERSION     DATMQB010000024.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8409)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8409)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8409
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3106737"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..649
                     /locus_tag="VNY79_00830"
     CDS             <1..649
                     /locus_tag="VNY79_00830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdenum storage protein subunit alpha"
                     /protein_id="HWX71021.1"
                     /translation="VDELRNLLPEHRLLILTGAGIRARHVYSVGLDLGLPVGSLAPLA
                     ASEAGQNGHILALLLAPEGVSYLEHPTIANQLAIHLTATRAVVGSAFPPYHHHEFPTS
                     RIPPHRADTGAFLLADALGAAGLTIVEDVDGVYTTDPKGPDGKQAQLLRETSASELAK
                     LQGTLPFDRALLEVMATARHIDHVQVVNGLVPGRLTAALRGQHVGSIVHTGARSA"
     gene            1093..1299
                     /locus_tag="VNY79_00835"
     CDS             1093..1299
                     /locus_tag="VNY79_00835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010910187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding protein"
                     /protein_id="HWX71022.1"
                     /translation="MKVSARNQLKGKIAEVTKGATTSHVLIEIGSGVVVTASITNEAV
                     ADLQLKKGDDAWAVIKASDVMIGK"
     gene            complement(1324..2574)
                     /locus_tag="VNY79_00840"
     CDS             complement(1324..2574)
                     /locus_tag="VNY79_00840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extensin family protein"
                     /protein_id="HWX71023.1"
                     /translation="MKAFILVAASLAAFLPAFLAAIEPAAARDFIARPTPWFRPAPPP
                     ARRAVPPPAIAIPQQFSPPQEAYASFPETPAPTAAGAAPATSEPTPCRLRLGKLAAFK
                     PLPVLVGPGECGAADAVLLESVTLPDDTKVTFAPPATLRCTMAEQVALWLREDVLPAS
                     ASLGTQMRVLEDYDSYECRGQNRVRGATLSEHGRANALDLRGFKLANGKMVELTDVNV
                     AKEWRESLRASACVRFHTVLGPGSDGNHETHIHVDLAERRSGYKICQWDVREPVKVAE
                     KAKPETEDKAKPAAEEKGKPGAEEKGKTAAGEKAKPAVEEKAKPVVEAKAAPAAETKA
                     TPELGKKAKPVVEEKAKPEPEKKAVALEQPLPLPRPSNAPTDKSRLSSAADATQQSRG
                     PAVAAKQTPRHFTRRRWRYYRWWW"
     gene            2772..4409
                     /locus_tag="VNY79_00845"
     CDS             2772..4409
                     /locus_tag="VNY79_00845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty-acid--CoA ligase"
                     /protein_id="HWX71024.1"
                     /translation="MLGLMQDWPLLCHRIIDHAAVNHGGRPVISRSVEGPFHHTNYAE
                     VRARALRVAQRLERDGIKLGDRVATLAWNTWRHLESWYGIVGIGAIYHTVNPRLFPEQ
                     IVWIVNHAEDRVMMADLTFLPLLEKIADKMPSIERTIVFTDAAHMPATSLRNAVPYEE
                     WLAEADGDFAWKSFDENTAAGMCYTSGTTGNPKGVLYSHRSNVLHTLMSLQSEVIGIT
                     SGDVTLPIVPMFHANSWGLAFSSPTSGSALVLPGAKLDGPSVYELLNDFKVTCTGAVP
                     TVWLALLQHLEKTGGKLPYLKRVIIGGSACPRAMIKAFEENYGVQVFHAWGMTEMSPL
                     GSVGSLKPEYAKLPLEGRLDVKQKQGHSPFGVEMRITDDAGRVLPWDGKTFGRLKVRG
                     PAVAKAYFKEDGRILDDEGFFDTGDVATIDRYGYMQITDRSKDVIKSGGEWISSIDLE
                     NLAVGHPKVAEAAVIGARHPKWDERPLLVIVLKEGQSATRAEILAFLEGKVAKWWMPD
                     DVVFVSAIPHTATGKIQKTALRDQFKDYVLPTAVAAE"
     gene            4809..5165
                     /locus_tag="VNY79_00850"
     CDS             4809..5165
                     /locus_tag="VNY79_00850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020093388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HWX71025.1"
                     /translation="MAGYSLIKLVVASSLVASTVALPIAALAQSGVASVYSGQKTANG
                     EYASAGGLTAAHRTLPFGTKVRVTNQHTGRSVVVRINDRGPFVRGRVIDITPAAAHAL
                     GMSGLAPVTLTVLGRT"
     gene            5420..6763
                     /locus_tag="VNY79_00855"
     CDS             5420..6763
                     /locus_tag="VNY79_00855"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019825 - oxygen binding [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="globin-coupled sensor protein"
                     /protein_id="HWX71026.1"
                     /translation="MASTETIPGFRDRLALYGIDDRTRSLLAEAWPAIAPGLERAIHE
                     ILQAVSGLPRVGGVVAGNRDMVKELEVAHFQALLQGKLDQRYAESCRQTVEQEAALGL
                     DARMRSTAGSYVLKAAFDALARKHRFSAARFAAQARSVSQAISFDVANAMTLHRQAAE
                     QAVLARRSLIDSAIADFAGAIGDVIDAIKEASASLTATCSTLKGTADTTLARMASASS
                     ASAETTHRMDATVTATEELSGSIQEIGEQATRGLGMAQSAVGDTRRTQDTIRSLAEAA
                     ERIGSVVGAISAIAGQTNLLALNATIEAARAGEAGKGFAVVAAEVKSLANQTSRATDD
                     ISQQVAAIQEATKRSVEEISSITHAMGELANASTSIASAVQQQSMTTREIAESIHTAA
                     SHTTLASTEINSAEKVVAQGATAVDEITAWTARLSARARDLETKVASFFTRVRAA"
     gene            6905..7930
                     /locus_tag="VNY79_00860"
     CDS             6905..7930
                     /locus_tag="VNY79_00860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012091235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HWX71027.1"
                     /translation="MSETAVRQIVLASRPKGPPTAENFRLEEVPMPPPPPGGLLLRVL
                     YLSLDPYMRGRMDDRKSYAKPVGVGEVMEGESVCEVVKSDRSGYAAGDIVLARTGWRT
                     HAAWDGAAPRKLDPAKAPITTGLGVLGMPGFTAYSGLLLIGKPKPGETVVVAAASGPV
                     GSLVGQLAKIGGARAVGVAGGADKCRYVAEELRFDAAIDHRAPDFAEQLAAACPKGVD
                     VYFENVGGAVWQAVLPLLNPFARVPVCGLIAQYNASGQAPGPDLLPATMRAVLTKSLT
                     IRGFINIEFAADHYAEFLRTVAAGLADGRIRHREDVTEGLENAPAAFMGLLQGRNFGK
                     AVVRVAH"
     gene            complement(8111..>8409)
                     /locus_tag="VNY79_00865"
     CDS             complement(8111..>8409)
                     /locus_tag="VNY79_00865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="YidC/Oxa1 family membrane protein insertase"
                     /protein_id="HWX71028.1"
                     /translation="FLHLGIWPAIMGVTMWVQMKLNPAPPDPTQQMIFNWMPIIFTFM
                     LATFPAGLVIYWAWNNTLSVIQQSAIMHRNGAKIELWDNLRRTFVKPKPKQPAE"
BASE COUNT         1450 a         2747 c         2735 g         1477 t
ORIGIN      
        1 cgtggacgaa ctccggaatc tcctgcctga gcaccgtctg ctcattctga ccggcgcagg
       61 catccgcgcc cgccacgtct acagcgttgg tctcgatctc ggcctgccgg tcgggtcgct
      121 tgccccgctt gccgcgagcg aggccggcca gaacggccac atcctcgcgc ttctgctcgc
      181 gccggagggt gtctcctacc tcgagcaccc gactatcgcg aatcagctcg ccattcacct
      241 caccgcgacc cgcgcggtcg tcgggagcgc ctttcctccg tatcatcacc acgagttccc
      301 gacctcgcgc atcccgccgc accgggccga cacaggcgcg tttctgctcg ccgacgcgct
      361 cggagcggcc ggcctcacga tcgtggagga cgtggatggg gtgtacacca ccgatcccaa
      421 gggacccgac ggaaagcagg cgcagctgct ccgcgagacg agcgccagcg agctcgcgaa
      481 gctgcagggc acgctgccgt ttgaccgcgc gctcctggag gtcatggcga ccgcacgcca
      541 catcgaccac gtgcaggtcg tgaacggact ggtgccgggc cgcctcaccg cagcgctacg
      601 cggccagcac gtcgggtcga tcgttcacac cggcgcccgc tcggcctgaa cgtcgaaaat
      661 gatgatgacg tcacgtcggc tcatttgatg ccacgtcgag tccggcgatt gatcggcccg
      721 gtcgctaccg aatgacgatc gggccagctt gtgatatcgg tgaagtcagc ttctgactgc
      781 gccgcggctg ctggctacga tgcactacaa gtcggcattt gaatggcatg tccgagcttg
      841 gccgttagcg tcggattttg aactccgcct gtgcggtcgc taacggagga acagcggata
      901 tggcgaattg tgagtacacg gcctaactaa gccggcttgc ccggccgtcg ccacgtgtcc
      961 gccgcgcgat cggtgcgtct atgacgccgg tgagccgggg cctgtggttc gccgccggca
     1021 aggtgcgcgt cggtcgttgc cgattaggtg cagaagaaac acgccgcgcg gtttttcaaa
     1081 tgggagcaga agatgaaggt cagtgcacgc aaccagctca agggcaagat tgcagaagtg
     1141 acgaaaggcg ccaccacctc tcatgttctc atcgagatcg ggtcgggcgt cgtcgtcacc
     1201 gcctccatca ccaacgaagc cgttgccgat cttcaactga agaagggcga cgatgcctgg
     1261 gcggtcatca aggcttccga tgtcatgatc gggaagtaag gcgcctttcc ggccggtcct
     1321 tcctcaccac caccatcgat agtaacgcca gcgccgccgc gtaaagtgac gcggcgtctg
     1381 cttggctgca actgcgggcc cacgtgattg ttgcgttgcg tcggcggcgc tcgacagacg
     1441 tgacttgtcg gttggggcgt tgctcggccg tggcagcggc agcggctgct cgagggcaac
     1501 cgctttcttt tcaggctcgg gcttcgcctt ttcttcgacg accggctttg ctttcttccc
     1561 aagctccggc gtggctttcg tttcggctgc cggcgcggct ttcgcttcga cgaccggctt
     1621 ggctttctct tcgactgccg gcttcgcctt ttctccggcc gcggtcttgc ctttctcttc
     1681 ggctcccggc ttccccttct cttccgccgc cggcttggct ttgtcttcag tctccggctt
     1741 tgccttctcc gccaccttga ccggctcgcg gacgtcccac tgacagatct tgtagccgct
     1801 gcgccgttcg gcgagatcga cgtggatgtg cgtttcgtga ttgccgtcag atcccggacc
     1861 gagcacggtg tggaagcgga cgcaggcgct tgcgcgcagg ctctcgcgcc attccttggc
     1921 gacgttcacg tccgtcagtt cgaccatctt gccgttggcg agcttgaaac cgcgcaggtc
     1981 gagcgcattg gcgcggccgt gctcgctcaa cgtggcgccg cggacgcgat tctggccgcg
     2041 gcattcatag gagtcgtagt cctcgaggac gcgcatctgc gtgcccaggg acgctgacgc
     2101 cggcaggaca tcctcacgca gccaaagcgc cacctgctcc gccatcgtgc agcgcaacgt
     2161 cgccggcggg gcaaatgtga ctttcgtgtc gtcgggcagg gtcacgcttt cgagcagcac
     2221 ggcatcggcg gcgccgcatt cgcccggccc gaccagtacc ggaagcggct tgaatgccgc
     2281 gagcttcccc aatcgcaacc ggcagggggt tggctccgag gtggcaggcg cggcgccggc
     2341 tgcggtcggg gccggcgtct ccgggaacga ggcgtaagcc tcctgaggcg gcgagaactg
     2401 ctggggaatg gcaatcgccg gcggcggcac agcccgccgc gcgggagggg gggcgggcct
     2461 gaaccatggc gtgggccgcg cgataaagtc gcgagcggct gcgggctcga tcgccgccaa
     2521 gaaggcaggc aggaacgcgg ccaaggacgc ggcaacgagg atgaaggcct tcacgcggca
     2581 ggtctccggc gcattggcgg cgctttctcg acaaggctaa cgccgcacgg cgccaatccg
     2641 ttcaaacggc tcgtcagcat gtcttccgaa cggcattttc attgctgccg cgtgccgcta
     2701 catttgggac catcggcgcc gcgcggcgct caaggcaaga accagataaa gcctattcca
     2761 ggaggaatgt catgctcggc ctcatgcagg attggccgct cctttgccat cgcatcatcg
     2821 atcatgccgc cgtcaaccac ggcgggcggc cggtgatctc gcgttcggtc gaaggcccgt
     2881 ttcaccacac caactacgcc gaagtccgcg cgcgcgcgtt gcgcgtagcg caacgcctcg
     2941 aacgcgacgg catcaagctc ggcgaccgcg tggcgacgct cgcctggaac acctggcggc
     3001 acctggaaag ctggtacggc attgtcggta tcggcgccat ctaccacacc gtcaatccgc
     3061 gcctgttccc cgagcagatc gtctggatcg tcaaccacgc cgaggaccgc gtgatgatgg
     3121 ccgatctcac cttcctcccg ctgctcgaga agatcgccga caagatgccg agcatcgagc
     3181 gcaccatcgt attcaccgac gccgcgcaca tgccggcgac cagcctgcgc aacgccgttc
     3241 cctatgagga gtggctggcg gaggcggacg gggatttcgc ctggaaatcg ttcgacgaga
     3301 ataccgcggc cggaatgtgc tacacctccg gcaccaccgg caatcccaag ggcgtactct
     3361 attcgcatcg ctccaacgtg ctgcacacgt tgatgtcgct gcagtcggag gtgatcggca
     3421 tcacctcggg cgatgtcacg ctgccgatcg tgccgatgtt tcatgccaac agctggggcc
     3481 tcgccttctc ctcgccaacg tcaggcagcg ccctggtcct tcccggcgcc aagcttgatg
     3541 gcccctcggt ctacgaactg ctcaacgatt tcaaggtgac ctgcaccggc gcggtcccga
     3601 cggtgtggct cgctttgctc cagcacctgg agaagaccgg cggtaagctc ccgtatctga
     3661 aacgagtcat catcggcggc tcggcgtgcc cgcgcgccat gatcaaagcg ttcgaggaaa
     3721 actacggtgt ccaggtgttc catgcctggg gcatgaccga aatgagcccg ctcggcagtg
     3781 tcggctcgct caagcccgaa tacgccaagc tgccgctgga gggccgcctc gacgtcaaac
     3841 agaagcaagg gcactcgccg ttcggcgtcg agatgaggat caccgacgat gccggtcgcg
     3901 tcctgccgtg ggacggcaag acgttcgggc ggctcaaggt gcgcgggccc gccgtggcca
     3961 aggcctattt caaggaagac ggccgcatcc tcgacgacga gggtttcttc gataccggcg
     4021 atgtcgccac catcgaccgt tacggctaca tgcagatcac cgaccgctcg aaggatgtca
     4081 tcaagtcggg cggcgagtgg atttcctcca tcgatctgga aaacctcgcg gtcggccatc
     4141 cgaaagtggc ggaagcggcg gtgatcggcg cccggcatcc caaatgggac gagcggccgc
     4201 tgctcgtcat cgtgctcaag gaggggcaat cggccacccg agccgagatc ctcgccttcc
     4261 tggagggcaa ggtcgccaag tggtggatgc cggacgacgt cgtgttcgtc agcgccatac
     4321 cgcataccgc gaccggcaag atccagaaga cggccttgcg cgaccagttc aaggactatg
     4381 tgctgccgac cgctgtcgcg gccgagtgat gacttgagct cgggcgcgtt gcctcggggc
     4441 gatcatcacc cctgctgaag gggggtcgat agcggtcgcc gtctgccgcg cggatcgggc
     4501 aaggccgcca aaaaaatcct gcctgtgccg gcgtcgagcc ggacccgaat accggttcca
     4561 gcgttgtgtg cgtagcggca tggcgaggca ttgactccag ccgcatccaa gttccgtaga
     4621 gagttttact gtgtgtaagt attgttacaa agtatttcag caagtaacgg cgttaataat
     4681 gtttttacaa agagtgattc gtaaatgtcg cgtcgcacta tctccacaat tcctaatcac
     4741 taaccacgcc ttggctcccg taaggaagcc aaatcaccca tcccttcaat aacgcgagaa
     4801 ggaagatcat ggctgggtat agcctgatta agcttgtagt tgcttcaagt cttgtcgcat
     4861 cgactgttgc actcccaatc gccgcattgg cgcagagcgg tgtagcgtcg gtctattccg
     4921 gacagaagac cgcgaatggc gaatatgcca gcgccggggg cttgaccgcc gcgcaccgca
     4981 cgctgccgtt cgggacgaag gtccgggtca ccaatcagca cacgggccgt tcggtcgtgg
     5041 tgcgcatcaa cgaccgtgga cctttcgtcc gcggtcgggt gatcgacatc acgcccgcgg
     5101 cggcgcatgc gctgggtatg tcagggctcg ccccggtgac gctgacggtg cttggcagga
     5161 cctgaggtac ctattgaggg tggctgttgc cgatgcattc gccggttggg cgaagggcat
     5221 tggcgcggtg tgatggcggg gggcttcggc ctcccgcttt tttatcagcg atgatgatag
     5281 cgcaagcgtt gcgccatgcg ccgcgatgcc gatcgcgctc cgacgcagaa gcttgcgggc
     5341 gccgacggta accagatcgt taatactggg gcaaccattg tcggcgacga tggcgtgccc
     5401 aacaagatac cgcccttcca tggcctcgac cgaaacaatt cccggttttc gtgatcggct
     5461 tgccctctac gggatcgacg accgcacccg ctctctcctc gcggaggctt ggccggcgat
     5521 cgcgcccggt ctggagcgcg cgattcacga gatactccaa gcggtcagcg gcctaccccg
     5581 cgtcggtggt gtcgtggcgg gcaaccggga catggtcaaa gagctcgagg tggcgcactt
     5641 ccaggctctc ctgcagggca agcttgatca gcgttacgcc gaatcgtgcc ggcagactgt
     5701 cgagcaggag gccgcactgg ggctcgacgc ccgcatgcgc agcaccgccg gcagttatgt
     5761 gctcaaggcc gcgttcgacg ctctcgcgcg caagcatcgc ttttccgcgg cgcggtttgc
     5821 cgcgcaggcg aggagcgtat cgcaggccat cagcttcgac gtcgccaatg ccatgaccct
     5881 gcaccggcag gcggccgagc aagcggtatt ggcccggcgc agcttgatcg actcggcgat
     5941 agcggacttc gccggcgcca tcggcgacgt gatcgacgcc atcaaggaag cctccgcttc
     6001 gctgaccgcg acatgctcga cgctcaaggg caccgcggac acgacgcttg cccgcatggc
     6061 ttccgcgtcg tcggcctcgg cagaaacgac gcaccgcatg gacgcgaccg tcaccgccac
     6121 ggaagaattg tccggatcga tccaggagat cggcgagcag gcgacccgcg gcctcggcat
     6181 ggcgcagtct gcggtcggag ataccaggcg cacccaggac accatccgtt cgctggccga
     6241 agccgccgaa cgcatcggct cggtggtcgg cgccatttcg gcgattgccg gacagaccaa
     6301 tctcctggcg ctcaacgcca cgatcgaggc ggcgcgcgcc ggggaagccg gcaagggttt
     6361 cgccgtggtc gccgcggagg tgaagtcgct cgccaaccag acctcgcgcg ccaccgacga
     6421 catctcgcag caggtagccg cgatccagga ggcgaccaag cgatcggtgg aggagatctc
     6481 ctcgatcacc cacgcgatgg gcgaattggc gaacgcatcg acgagcatcg cttccgcggt
     6541 ccagcagcag agcatgacca cccgcgagat cgccgaaagc attcacacgg cggcgagcca
     6601 taccacgctg gcatcgacgg agatcaattc cgcggagaag gtggtggcgc agggcgcgac
     6661 ggcggtcgac gagatcacgg cctggacggc gcggttgtcc gcgcgcgcgc gggacctgga
     6721 gacaaaggtg gcgagcttct tcacccgcgt ccgcgccgcc tgacagccga gctcccactc
     6781 ccgccgccgc gccgggaccg aattgcaata gatccggaaa tatctgaaaa gcggacgggg
     6841 gtcgccccgc cgcacgtggc cgcgatctca ggtcgcgcat gcgtcgcctc tttgggagca
     6901 gaacatgagt gaaaccgcgg tcaggcagat cgtattggcg tctcggccca aggggccgcc
     6961 gacggcggag aatttccgac tcgaggaagt gccgatgccg ccgccgccgc ccggcgggct
     7021 cctgctgcgg gtgctctatc tgtcgctcga cccctacatg cgcggccgca tggatgatcg
     7081 gaaatcctat gccaagccgg tcggcgtcgg cgaggtgatg gagggggaga gcgtgtgcga
     7141 ggtggtcaag tccgatcgtt ccggctacgc cgccggcgac atcgtgctgg cgcgcaccgg
     7201 ctggcgcacg catgcggcgt gggatggcgc cgcgccgcgc aagctcgacc cggcaaaggc
     7261 gccgatcacc accgggctgg gcgtgctcgg gatgccgggc tttaccgcat attcaggcct
     7321 gctgctcatc ggcaagccca aaccgggcga gacggtggtc gtcgcggcgg cgagcggtcc
     7381 agtcggttcg ctggtcggac agctcgccaa gatcggcggc gcccgcgcgg tcggcgttgc
     7441 cggcggggcg gacaagtgcc gttacgtcgc cgaggagctg cgcttcgacg cggccatcga
     7501 ccatcgggcg ccggactttg ccgaacagct cgcggcggca tgcccgaagg gcgtcgatgt
     7561 ctacttcgag aatgtcggcg gcgccgtctg gcaggccgtg ctgcctctgc tcaatccgtt
     7621 cgcgcgggtg ccggtctgcg ggctgatcgc gcagtacaac gcgagcggcc aagccccagg
     7681 accggacctc ctccccgcga ccatgcgcgc agtgctgacc aagagcctga ccatccgcgg
     7741 cttcatcaac atcgagttcg ccgccgacca ctatgccgag tttctgcgca ccgttgccgc
     7801 cggcctcgcc gacggccgca tccgccatcg cgaggacgtg accgagggcc tcgaaaacgc
     7861 cccggcggcc ttcatggggc tgctccaagg gcgcaatttc ggcaaggcgg tggttcgggt
     7921 cgcgcattga cgccgaggcg ccgcggcacc tcggaagcgt cgcctcaaag atgccactga
     7981 ccgtggaagt cggacacgcg gtgcgcgccg gcgcgaaagt tcgaccggcg tcgcgagcaa
     8041 ccggatgcga tggttaaatt atcgatcgcc ggcccgcgcg tcatcgcgcg gcacgagccg
     8101 caccccggga ctattccgcc ggctgtttcg gtttcggctt gacgaaggtg cgcctgaggt
     8161 tgtcccacag ctcgatcttg gcgccgttcc ggtgcatgat cgcgctctgc tggatgaccg
     8221 agagcgtgtt gttccaggcc cagtagatca ccaggccggc cgggaaagtc gccagcatga
     8281 aggtgaagat gatcggcatc cagttgaaga tcatctgctg ggtggggtcg ggcggcgccg
     8341 gattgagctt catctgcacc cacatggtca cccccatgat cgccggccaa atgccgagat
     8401 gaaggaagc
//
LOCUS       DATMQB010000025         2132 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_316676, whole genome shotgun sequence.
ACCESSION   DATMQB010000025 DATMQB010000000
VERSION     DATMQB010000025.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2132)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2132)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2132
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316676"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            42..461
                     /locus_tag="VNY79_00870"
     CDS             42..461
                     /locus_tag="VNY79_00870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20/alpha crystallin family protein"
                     /protein_id="HWX71029.1"
                     /translation="MARDVARDWMWSEACEMLARAERMHREIFRPAATPTRQVAWEPP
                     VDILETDLEVLVLVALPGVDGDSAQAVIEDGDLVIAGTRGYPRELRTATIHRLELPQG
                     RFYRRLRLPGGRYSGVSRAVANGLMVITLQKAGTIRG"
     gene            469..>2132
                     /gene="lon"
                     /locus_tag="VNY79_00875"
     CDS             469..>2132
                     /gene="lon"
                     /locus_tag="VNY79_00875"
                     /EC_number="3.4.21.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endopeptidase La"
                     /protein_id="HWX71030.1"
                     /translation="MLSSSEPGQSGSTLPPLPADALIIVPVRNTVLFPGLMLPITLGR
                     PKSIAAAQQAVRDQRQVGILMQRDSELAEPTPIDMHRMGTIANIVRYITAPDGTHHLV
                     CQGERRFQVAEYLNGWPFFVARIVQIPEPDTRSSEIEARFVNLRAQTVEALQLLPQAP
                     AELVAAVQSVEAPAQLADLAIAYMDVKPEEKQEILETIDIAARMDKVSRLLAHRIEIL
                     RLSQEIGRQTKAALDERQREVLLREQMAAIQRQLGEGEEGKAAEMAELDKAIGKAGMP
                     KEVEDQARKELRRLQRMPEAAGEYGMVRTYLDWLIELPWALPEEKPIDIAEARRILDE
                     DHYDLDKIKRRIVEYLAVRKLAPQGKAPILCFVGPPGVGKTSLGQSIARAMDRKFVRV
                     SLGGVHDEAEIRGHRRTYIGALPGNIIQAIRKAGARNCVMMLDEIDKLGAGIQGDPGA
                     ALLEVLDPEQNNTFRDNYLAVPFDLSRVAFITTANMLDTVPGPLRDRMEIISLAGYTV
                     EEKLEIARRYLVKRQLEANGLKPGQVEIGDDVIRDIIQSYTREAGVR"
BASE COUNT          382 a          731 c          709 g          310 t
ORIGIN      
        1 gccaatccac acataactcc tccgaaactg gagggcgcac catggcgcgt gacgtggccc
       61 gcgattggat gtggtcggaa gcgtgcgaga tgctcgcgcg cgccgagcgc atgcatcgtg
      121 agatattcag gcccgcggcg acgccgaccc gccaggtcgc ctgggagccg ccggtcgata
      181 ttctcgagac tgatctcgag gtcctggtgc tcgtcgcctt gcccggcgtc gacggcgaca
      241 gcgcccaggc ggtcatcgag gacggcgacc tcgtcatcgc cggcacgcgc ggctatccgc
      301 gcgaattgcg caccgcgacc atccaccggc tcgaactgcc gcaagggcgc ttctatcggc
      361 ggctgcggct gccaggcggc cgctacagcg gcgtgagccg cgccgtggcc aacggcttga
      421 tggtgatcac gttgcagaaa gcaggaacga tccgtggctg aagttgaaat gctgtcatcg
      481 agcgagcccg gacagagcgg ctcgacactg ccgccgctgc cggccgatgc gctcatcatc
      541 gtgccggtgc gcaacaccgt gctgttcccc ggcctgatgc tgccgatcac gctcggacgg
      601 ccgaaatcga tcgccgccgc gcaacaggcg gtgcgcgacc agcgccaggt gggcatcctc
      661 atgcagcgcg attccgagct cgccgagccg accccgatcg acatgcatcg catgggcacg
      721 atcgccaaca tcgtccgcta catcaccgcg cccgacggca cgcaccatct cgtctgccag
      781 ggcgagcgac gctttcaggt cgccgaatac ctgaacggct ggccgttctt cgtcgcgcgc
      841 atcgtgcaaa tcccggagcc ggatacacgg tcctccgaaa tcgaggcgag gttcgtcaac
      901 ctccgggcgc agaccgtgga agcgctgcag ctgctgccgc aggcgcctgc cgaactcgtg
      961 gccgccgtcc agtcggtcga ggcgcccgcg cagctcgccg atctcgctat cgcctacatg
     1021 gacgtgaagc cggaggagaa gcaggagatc ctggagacga tcgacattgc cgcccgcatg
     1081 gacaaggtct cgcgcctgct cgcccatcgc atcgaaatct tgcggctgtc gcaggagatc
     1141 ggccgccaga ccaaggcggc gctcgacgag cgtcagcgcg aggtgctgct gcgcgagcag
     1201 atggcggcga tccagcgcca gctcggcgag ggcgaggagg gcaaggccgc cgagatggcc
     1261 gagctcgaca aggcgatcgg caaggccggc atgcccaagg aggtcgagga tcaggcgcgc
     1321 aaggagctgc gccggttgca gcgcatgccc gaagccgccg gcgaatacgg catggtgcgc
     1381 acctatctcg actggctgat cgagctgcct tgggcgctgc ccgaggagaa accgatcgac
     1441 atcgccgagg cgcggcgcat cctcgatgag gaccactacg acctcgacaa gatcaagcgg
     1501 cgcattgtcg aatatctcgc cgtgcgcaag ctcgcgccgc agggcaaggc gccgatcctg
     1561 tgcttcgtcg ggccgcctgg cgtcggcaag acctcgctcg gccagtcgat cgcgcgcgcc
     1621 atggaccgca agttcgtgcg cgtgagcctc ggcggcgtgc acgacgaggc ggagatccgc
     1681 ggccaccgcc gcacctatat cggcgcgctg cccggcaaca tcatccaggc gatccgcaag
     1741 gccggcgcgc gcaattgcgt gatgatgctc gacgagatcg acaagctcgg cgccggcatc
     1801 cagggcgatc ccggcgcggc gctgctcgaa gtgctcgatc ccgagcagaa caacaccttc
     1861 cgcgacaatt atctggcggt gccgttcgat ctctcccgtg tggcgttcat caccaccgcg
     1921 aacatgctcg acaccgttcc ggggccgctg cgcgaccgca tggagatcat cagcctcgcc
     1981 ggctacaccg tcgaggagaa gctcgagatc gcgcgccgct acctggtgaa gcgccagctg
     2041 gaggcgaacg gcctcaagcc ggggcaggtc gagatcggcg acgatgtcat ccgcgacatc
     2101 atccagagct acacccgcga ggccggcgtg cg
//
LOCUS       DATMQB010000026         3749 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_316807, whole genome shotgun sequence.
ACCESSION   DATMQB010000026 DATMQB010000000
VERSION     DATMQB010000026.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3749
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_316807"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..746)
                     /locus_tag="VNY79_00880"
     CDS             complement(<1..746)
                     /locus_tag="VNY79_00880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HWX71031.1"
                     /translation="MRKVSAFNIVALTLGIAFLYLPIAVLVVYSFNASRLVAVWGGWS
                     TRWYAALVDDAPLIDSALISIRLTLVAASAATLLGTLAALALTRFGRFHGRLLFAGMI
                     YAPLVMPEVITGLSLLLLFVAVAADRGFWTVAIAHTTMAMCFVTVIVQSRLVDFDRSL
                     EEAAMDLGASPLRTFVVVTLPLILPAIAAGWMLAFALSLDDLVIASFTTGPGATTLPI
                     RIYSEVRLGVKPEMNAVCSIMVAVVGVAVIA"
     gene            complement(750..1661)
                     /locus_tag="VNY79_00885"
     CDS             complement(750..1661)
                     /locus_tag="VNY79_00885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HWX71032.1"
                     /translation="MKRQREESFWRTLAVRIPYAWLLAFFLVPFLIVLKMSLSQTTIA
                     QPPYTPVLDLAAGWQGIEAFFAALSFDNYVLLGSDPLYLLSYLKSVEIAAFSTLILLV
                     IGYPIAYAIARTPRRWQAVLVVLTVLPFWTSLLIRIYAWMNILERDGPLNQVLVALRI
                     VSEPPVWLATDTATYIGIVYSYLPFMVLPLYATLEKMDETLLEAAADLGCRRWRAFWR
                     VTFPLSASGVLAGTLLCFIPIVGEFVIPDLLGGSQSPMIGQTIWTEFFGNKDWPAASA
                     VAVVLVCLLVTPILVYQHQAMRLARRD"
     gene            complement(1714..2847)
                     /locus_tag="VNY79_00890"
     CDS             complement(1714..2847)
                     /locus_tag="VNY79_00890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008593738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX71033.1"
                     /translation="MGTVGAKRGFAPWADPNPRPLLRLEAVTKGFGGAAAVDHLSLDV
                     FEGEFFALLGPSGCGKTTLLRLIAGFERPDTGRVILDGVDLAPVPPYRRPVNMMFQSY
                     ALFPHLNVEANVAFGLKQERLPRREIGQRVADMLAMLKLENFGRRKPHELSGGQRQRV
                     ALARSLVKRPRLLLLDEPLAALDKKLRGETQFELMEIQRRLGLTFVIVTHDQSEAMTL
                     ADRIGVMDRGRLMQVAPPAEIYEQPNSRWVADFIGDVNLFEGRLGDDGSSIEGTAAGR
                     LRTAGKVDAEPGAPVWAAVRPEKIAMTRQPPASSGDNCLAATVVDIGYLGDMSLYKVR
                     LAGGAQMKAAIANIGRRPDSEAPAFDEEVWLVWPPEATIVLTR"
     gene            complement(3082..3321)
                     /locus_tag="VNY79_00895"
     CDS             complement(3082..3321)
                     /locus_tag="VNY79_00895"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71034.1"
                     /translation="MHRGVMPITPFLTGQPFDPEAVRAMSAAFDSVCQSLGLRAGADP
                     AAEVIAKKIIELAQRGVRDPAALGERVLRELDLDQ"
     gene            complement(3584..>3749)
                     /locus_tag="VNY79_00900"
     CDS             complement(3584..>3749)
                     /locus_tag="VNY79_00900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HWX71035.1"
                     /translation="RFGADLTAAEVRYLMTKEWAQTADDVLWRRSKLGLRFTDAQRAM
                     LDRFMALANA"
BASE COUNT          710 a         1214 c         1282 g          543 t
ORIGIN      
        1 gcgatgaccg cgacgccgac cacggcgacc atgatgctgc acaccgcgtt catctccggt
       61 tttaccccga ggcggacctc ggaatagatg cggatcggca gcgtggtcgc gcccggtccg
      121 gtggtgaagc tcgcgatgac cagatcgtcg agcgaaagcg cgaaggcgag catccagccg
      181 gcggcaatcg ccggcagaat cagcggcagg gtcaccacaa cgaaggtgcg caacggcgaa
      241 gcgccgagat ccatggccgc ctcctcgagg ctcctgtcga aatcgacgag gcgcgactgc
      301 acgatgacgg taacgaagca catcgccatc gtggtgtggg cgatggccac cgtccagaag
      361 ccgcggtcgg cggcgacggc gacgaaaaga aggagcagcg acaatccggt gatcacctcc
      421 ggcatgacca gaggggcata gatcatcccg gcaaacagga gccggccgtg gaagcggccg
      481 aaacgcgtga gcgccagcgc cgcgagcgta ccgagcagcg tcgccgcgct cgccgcgacc
      541 agcgtcaggc ggatactgat gagcgcggaa tcgatgagcg gcgcatcgtc gacgagcgcc
      601 gcgtaccagc gcgtcgacca gccgccccag accgccacga ggcgcgaggc attgaaggaa
      661 tagaccacca ggacggcgat cggcagatag aggaaggcga tgccgagcgt gagggcgacg
      721 atgttgaagg cggagacctt gcgcatggtt cagtcccgcc gcgccagccg catcgcctgg
      781 tgctgataga cgaggatcgg cgtcaccagc aggcagacca gcaccacggc gaccgcggag
      841 gctgccggcc aatccttgtt gccgaagaat tccgtccaga tcgtctgccc gatcatcggc
      901 gactgcgagc cgccgagcag atcgggaatg acgaactcgc cgacgatcgg gatgaagcac
      961 aacaaggtgc cggcgagcac gccggacgcc gacagcggaa aggtcacccg ccagaatgcg
     1021 cgccagcgcc ggcagccgag gtcggcggcc gcctcgagca gcgtctcgtc catcttctcg
     1081 agcgtcgcat agagcggcag caccatgaac ggcagatagg aatagacgat gccgatatag
     1141 gtcgcggtgt cggtggcaag ccagaccggg ggctcgctca ctatccggag cgccacgagc
     1201 acctggttga gcggcccgtc gcgctcaagg atgttcatcc aggcgtagat gcggatgagg
     1261 agcgacgtcc agaacggcag caccgtgagg acgacgagca ccgcctgcca gcgccgcggc
     1321 gtgcgcgcga tcgcgtaggc gatgggatag ccgatgacga gcagaatgag tgtcgagaac
     1381 gcggcgatct cgacgctctt gagataggag agaaggtaga gcggatcgga gccgagcagc
     1441 acgtagttgt cgaacgacag cgcggcgaag aaggcctcga tgccctgcca gcccgcggcg
     1501 aggtcgagca ccggcgtgta gggcggttgc gcgatcgtgg tctgcgacag gctcatcttg
     1561 agcacgatca ggaacggcac gagaaagaac gccagcaacc aggcataggg gatgcgcacg
     1621 gcgagcgtcc gccagaacga ctcctcccgt tgccgcttca tactttcccc gtcccggtca
     1681 ttctcgcgag cacagcgccg caagctcgtt cgcttaacgc gtcagcacga tcgtcgcctc
     1741 cggcggccag acgagccaca cctcctcgtc gaaagccggc gcctcgctgt cgggacggcg
     1801 gccgatattg gcgatggccg ccttcatctg cgcgccgccg gcgaggcgca ccttgtagag
     1861 cgacatgtcg ccgagatagc cgatatcgac gaccgtggcg gcgagacaat tgtcgccgct
     1921 cgatgccggc ggctggcgcg tcatggcgat cttctccggc cgcaccgcgg cccagaccgg
     1981 cgctccgggt tcggcgtcga ccttgccggc ggtgcgcagg cggccggccg cggtgccctc
     2041 gatgctcgaa ccgtcatcgc cgagccggcc ttcgaacaga ttgacgtcgc cgatgaagtc
     2101 ggcgacccag cgcgaattcg gctgctcata gatttccgcc ggcggcgcga cctgcatgag
     2161 ccggccgcga tccatgacgc cgatgcggtc ggcgagcgtc atcgcttcgc tctggtcgtg
     2221 cgtgacgatg acgaaggtga ggccgagccg gcgctgaatc tccatcagct cgaactgggt
     2281 ttccccgcgc agcttcttgt cgagcgccgc cagcggctcg tcgagcagca gcaggcgtgg
     2341 ccgcttgacc agcgaccgcg ccagcgccac gcgctggcgc tggccgccgg aaagctcgtg
     2401 cggcttgcgg cgcccgaagt tctcgagctt gagcatcgcc agcatgtcgg cgacgcgttg
     2461 cccgatctcc cgcctgggca ggcgctcctg cttgaggccg aaggcgacat tggcctcgac
     2521 gttgaggtgc gggaacaggg catagctctg gaacatcatg ttgaccggcc gccggtaagg
     2581 cggcaccggc gcgagatcga ccccgtcgag aatgacccgg ccggtgtccg gccgctcgaa
     2641 gccggcgatc aggcgcaaga gcgtggtctt gccgcaaccc gatggtccga gcagggcgaa
     2701 gaattcgcct tcaaagacat cgagcgatag atgatcgact gcggcagcgc cgccgaagcc
     2761 cttggtgacg gcctcgaggc ggagcagcgg acgcgggttc ggatcggccc agggcgcaaa
     2821 acctctcttg gctccgacgg tccccatgcg cgctccagcc gcggcggcgc ggcgggatgg
     2881 cgcgcgctgc acaacaccta gaacatgatc gagaaaactt gaacctcgtc ccgccaaccg
     2941 gctgcggcag gcccgaaaaa tgagaaaccc cgagcgctag agtcccgggg ctctctggcc
     3001 gagcgttgtc atgacacagt gaaagagccc gacctcacgc gttctatagc gcaaatcggt
     3061 ttgccccaca actccatgtc gtcactggtc gaggtccaat tccctgagca cgcgctcgcc
     3121 gagcgccgcc ggatcgcgca cgccccgttg cgctaactca atgattttct tggcaatgac
     3181 ttcggctgcc ggatcggcgc cggcgcgcag ccccagcgat tggcacacgc tgtcgaatgc
     3241 cgccgacatc gcgcgaacgg cctcggggtc aaacggttgc ccggtcagga agggagtaat
     3301 gggcatcacg ccacggtgca taggcgggag cgcgaccggt ctctcagcca ccgacgcccg
     3361 ctgacctagt cggtgatgcg aaaactgtgc gtcgctgcgt ttagtttgtc gagtcgcaaa
     3421 atttggcact cggtccgcgc gagtgccgcc agtgcgtggc gtgcggccct tgcgggttgg
     3481 taaaggcgcc gcccagtgtc ggggtgctgt gcgccccgca aatcggcggc cgccgccggc
     3541 gtggcgtgca ccgggttaac ggcaggggtg aagcgaaagc gcatcaggcg ttcgctagcg
     3601 ccatgaaacg gtcgagcatg gcgcgctgcg cgtcggtgaa gcgcaagccg agcttcgagc
     3661 gacgccacag cacgtcgtcg gcggtttgcg cccattcctt cgtcatcagg tagcgtacct
     3721 cggcggccgt aaggtcggcg ccgaagcgc
//
LOCUS       DATMQB010000027         5371 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4037348, whole genome shotgun sequence.
ACCESSION   DATMQB010000027 DATMQB010000000
VERSION     DATMQB010000027.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5371)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5371)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5371
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4037348"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(69..713)
                     /locus_tag="VNY79_00905"
     CDS             complement(69..713)
                     /locus_tag="VNY79_00905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008549823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HWX71036.1"
                     /translation="MAEYQLYCFAQSGNSYRAALMLKLIGADWQPVFVDFFASGVQRT
                     AGYRTDVNEMGEAPVLVHGAKKLTQSGVILTYLAERSGKFQPRGEDDRLEALRWIIFD
                     NQKVSGYLGPYRFLRTLAKPPGHPAVLEFFKGRIDNVLGILDKRLAGRAYVVGSEPTI
                     ADLSLVGYLYYPPEEFGFDVAANYKNIAAWLGRIKALPGWTHPYELMPGYPLPK"
     gene            complement(741..1160)
                     /locus_tag="VNY79_00910"
     CDS             complement(741..1160)
                     /locus_tag="VNY79_00910"
                     /inference="COORDINATES: protein motif:HMM:NF014968.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AprI/Inh family metalloprotease inhibitor"
                     /protein_id="HWX71037.1"
                     /translation="MRFAGAHAAKVAAALLVAGALTGCAGNDRVAARPEPQASAPPPP
                     APSPPPVDLAGRWKLSAAGSGACFMNLGNSPGALQGTIAPEGGCPGSFFTSRKWTFEH
                     DALIIRNHKGEPLAQLSFAGGRFEGREPNGAALSLSR"
     gene            1320..1982
                     /locus_tag="VNY79_00915"
     CDS             1320..1982
                     /locus_tag="VNY79_00915"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71038.1"
                     /translation="MTNVSPNAIAGTWARSAVAVLFGVGLVFSVAAARAENSGSGGAS
                     PVEEFSQQLEAFQKSVPDLNKSIQDSAGTIDSMNDVEKARAEIDKLRETVSALLGAVS
                     DNGPVSQLGAKALNHVHDKLKALAQETRFKQEERQFLIDQWRRLQDQTESATKELDDA
                     RAQFAGLLQTLQQNEDFIGELIEIRQAEKALEVIRSLTRDIRDASNQLNKLIGGIKPP
                     GA"
     gene            2006..2380
                     /locus_tag="VNY79_00920"
     CDS             2006..2380
                     /locus_tag="VNY79_00920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71039.1"
                     /translation="MRRGFGLTISALIVGAAIAACRPTGDVGYVEIKTVPVAPVTQMA
                     LYLDSAKLAPIKRGSTILRQHVGTRKLQADWIAGSLAPLCDIEVKRNRITTVTVSVLE
                     RPPRCQCRFNGSNGAADHSCVS"
     gene            complement(2470..3966)
                     /locus_tag="VNY79_00925"
     CDS             complement(2470..3966)
                     /locus_tag="VNY79_00925"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018478 - malonate-semialdehyde
                     dehydrogenase (acetylating) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HWX71040.1"
                     /translation="MREIGHFIGGIEVKGASGRFGDVFDPNTGEVQARVAFAKRSEVE
                     HAVAVAEAAQPAWATVNPQRRARVLMKFLELAQREFDSLARLLSSEHGKTFADAKGDV
                     QRGLEVVEFACGIPHLLKGEFTEGAGPGIDLFSMRQPLGVVAGITPFNFPAMIPMWKF
                     APALACGNAFILKPSERDPSVPMRLAELLLEAGLPAGVLNVVNGDKEAVDTLLTDSRI
                     RAIGFVGSSAIAEFVYTTACANNKRAQCFGGAKNHMIVMPDADMDQAVDALMGAGYGS
                     AGERCMAVSVAVPVGHKTADILLEKLVPRVESLKIGPSTDAQADYGPMITRAHLEKVK
                     SYVDLGIKEGAKLVVDGRGFKLQGYEKGNFMGGCLFDHVTPDMRIYKEEIFGPVLSVV
                     RAKDYEEAVRLPSEHEYGNGVAIFTRDGDAARDFVSRVEVGMVGVNFAIPVPLAYYTF
                     GGWKRSGFGDLNQHGPDAVRFYTKTKTVTARWPSGVKEGAEFVIPTMK"
     gene            4270..4887
                     /locus_tag="VNY79_00930"
     CDS             4270..4887
                     /locus_tag="VNY79_00930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71041.1"
                     /translation="MARSHCALAALVVLVAGMAAPCVPALAAEPLAVLREDNPSDPKQ
                     GKRYVGSTTWRTESSPPAAGRPAEVALRADVEIPERQIGMKWSLRRNTDKSMPASHMI
                     EIIFRLPPNAPGGGVAQAPGVVMKSKEDAQGMPLSGAAATVTNGFFIFALAAISAPQN
                     LQLLKEREWLDVPFAYANGTRAVISFEKGEPGGRAFAEAFAAWSK"
     gene            4884..4973
                     /locus_tag="VNY79_00935"
                     /pseudo
     CDS             4884..4973
                     /locus_tag="VNY79_00935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666110.1"
                     /note="Homologous to MotA in E. coli and Salmonella. With
                     PomB forms the ion channels that couple flagellar rotation
                     to sodium motive force across the membrane and forms the
                     stator elements of the rotary flagellar machine.;
                     incomplete; partial in the middle of a contig; missing
                     N-terminus and C-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein PomA"
     gene            4985..5172
                     /locus_tag="VNY79_00940"
                     /pseudo
     CDS             4985..5172
                     /locus_tag="VNY79_00940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609143.1"
                     /note="frameshifted; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          963 a         1764 c         1741 g          903 t
ORIGIN      
        1 ggataccgcc aagcggcgcg accttgcggt cgcgcaccct actcacccct tgagcgacgc
       61 aacaaggatc atttcggcag cggatagccg ggcatcagct cgtagggatg cgtccaaccg
      121 ggcagcgcct tgatgcggcc gagccaggcg gcgatgttct tgtagttcgc cgcaacgtcg
      181 aagccgaatt cctccggcgg gtagtagagg tagccgacga gcgacaggtc ggcgatggtc
      241 ggctccgagc cgacgacgta ggcgcgaccg gcgaggcgct tgtcgagtat gccgagcacg
      301 ttgtcgatgc ggcccttgaa gaattccagt accgccggat ggcccggcgg cttcgccagc
      361 gtgcgcagga agcggtacgg accgagatag ccgctgacct tctgattgtc gaagatgatc
      421 caacgcagtg cttcaaggcg gtcgtcctcg ccgcgcggct ggaattttcc ggagcgctcg
      481 gcgagatagg tcaggatcac gccggactgg gtcagcttct tcgcgccatg aacgagcacg
      541 ggagcttcgc ccatctcgtt gacgtcggtg cggtagccgg cggtgcgctg aacgccgctg
      601 gcgaagaagt cgacgaacac cggctgccag tcggcgccga tcagcttgag catcagcgcc
      661 gcgcgatacg agttgcccga ttgcgcaaag cagtagagct gatattcggc cattcttatc
      721 ccctcaaggg ctcaaggccg ctagcgcgac agcgagagcg cggcgccgtt cggttcacga
      781 ccttcgaagc ggccgccggc gaacgaaagc tgcgccagcg gttcgccctt gtgattgcgt
      841 atgatcaggg cgtcatgctc gaaagtccac ttgcggctgg tgaaaaaact tcccggacag
      901 ccgccctcgg gcgcgatcgt gccttgcagg gcgcctggcg agttgccgag attcatgaaa
      961 caggcgccgc tgcctgccgc gctgagcttc cagcggccgg cgaggtcgac cggaggcggg
     1021 gacggcgcag gtgggggcgg cgcgctggcc tggggctcgg gccgggcggc gacgcggtcg
     1081 ttgccggcgc atccggttag cgcaccggcc acgagcaatg cggccgcgac ctttgccgcg
     1141 tgggcccccg caaagcgcat tcccttgaag ccgctcatcc gtagcccagg aaacctcaaa
     1201 agccgccgca aaagaagccc ccaatcccgc ttttccgata ggcagggcgc cccacttgcg
     1261 ccaatattcc taaccgaaat caaccctatt gtgggtacct gtgtcgaggg aggcacgcca
     1321 tgacaaacgt ctcgccgaac gccattgccg gaacgtgggc acgatcggcg gtcgccgttc
     1381 tcttcggggt cggcctcgtg ttttcggtgg ccgcggcgcg cgccgagaac agcggcagcg
     1441 gcggagcctc gcccgtcgag gagttctccc aacagctcga ggccttccag aagagcgtcc
     1501 cggatcttaa caaatcgatc caagacagtg ccggcaccat cgacagcatg aacgacgtcg
     1561 agaaggcgcg cgccgagatc gacaaattgc gcgagacggt ctcggcgctg ctcggcgccg
     1621 tgtccgacaa cggtccggtc tcgcagctcg gggcaaaggc gctcaatcac gtccacgaca
     1681 agctcaaggc gctcgcgcag gaaacgcgct tcaagcagga ggagcggcaa ttcctcatcg
     1741 atcagtggcg ccggctccag gaccagaccg agagcgcgac caaggagctc gacgacgccc
     1801 gcgcgcaatt cgccgggctg ttgcagactc tgcagcagaa cgaggatttc atcggcgagc
     1861 tcatcgagat caggcaggcg gagaaggcgc tggaagtgat ccgcagcctc acgcgcgaca
     1921 tccgcgatgc ttccaatcag ctcaacaagc tgatcggcgg catcaagccg cccggagcgt
     1981 gagagcgaaa cgcgggagcg cgaccgtgcg ccggggtttt ggtcttacga tcagcgccct
     2041 gatcgtcggc gcggccatcg ccgcctgccg gccgaccggc gacgtcggct acgtcgagat
     2101 caagacggtc ccggtcgcgc cggtcacgca gatggcgctc tatctcgact ccgccaagct
     2161 tgcgccaatc aagcgcggca gcactatcct gcgccagcac gtcggcacgc ggaaactcca
     2221 ggccgactgg atcgccggat cgctcgcgcc gctttgcgac atcgaggtga agaggaaccg
     2281 cattaccacc gtcaccgtgt ccgtattgga acgcccgccg cgctgccaat gccgtttcaa
     2341 cggcagcaac ggagcggcgg accattcctg cgtgagctga gcggcggttt gcgggcccgc
     2401 gagcgaccgg ccgtgaatgg gcctcctggc tcgccgcgct gccgccttga aacgaccagc
     2461 aaacgccagt cacttcatcg tcggaatgac gaactcggcg ccttccttga cacccgaggg
     2521 ccagcgcgct gtcaccgtct tggtcttggt atagaagcgc accgcgtcgg ggccgtgctg
     2581 gttgaggtcg ccgaagccgg agcgcttcca gccgccgaag gtgtagtagg cgagcggcac
     2641 cgggatagcg aaattcacgc cgaccatgcc gacctcgacg cggctgacaa aatcacgtgc
     2701 ggcgtcgccg tcgcgggtga agatggcgac gccgttgccg tattcgtgct ccgacggcag
     2761 ccgcaccgcc tcttcgtagt ccttggcgcg caccaccgag agcaccggcc cgaaaatctc
     2821 ttccttgtaa atgcgcatgt cgggcgtcac gtggtcgaac aggcagccgc ccatgaagtt
     2881 gcccttctcg tagccctgca gcttgaagcc gcggccatcg acgacgagct tcgcgccttc
     2941 cttgatgccg aggtcgacgt agctcttaac tttttccaga tgcgcccgcg tgatcatcgg
     3001 cccgtaatcg gcctgcgcgt cggtcgacgg gccgatcttg aggctttcga cccgcggcac
     3061 gagcttttcc agaaggatgt ctgccgtctt gtgcccgacc ggcaccgcga cggaaactgc
     3121 catgcaacgc tcgccggccg agccgtagcc ggcgcccatc agcgcgtcga ccgcctggtc
     3181 catgtcggcg tccggcatga cgatcatgtg gttcttggcg ccgccgaagc actgcgcgcg
     3241 cttgttgttg gcgcaggcgg tcgtatagac gaattcggcg atggccgagg agccgacgaa
     3301 cccgatcgcc cttatccgcg agtcggtaag cagcgtatcg accgcttcct tgtcgccgtt
     3361 aacgacgttg agcacgccgg ccggcaggcc ggcttccagc agcagttcgg caagccgcat
     3421 cggcaccgag ggatcgcgct ccgagggctt gagaatgaag gcgttgccac aggcgagcgc
     3481 cggcgcgaat ttccacatcg ggatcatggc cggaaagttg aacggcgtga tgccggcgac
     3541 gacgccgagc ggctggcgca tggaaaacag gtcgatgccc gggccggcgc cctcggtgaa
     3601 ttcgcccttg aggaggtgcg gaatgccgca agcgaactcg acgacttcga ggccgcgctg
     3661 cacgtcgccc ttggcgtcgg cgaaagtctt gccgtgctcc gacgagagga gcctggcgag
     3721 gctgtcgaat tcccgttgcg ccagttcgag aaacttcatg agcacgcgtg cgcgccgctg
     3781 cggattgacg gtagcccagg ccggttgcgc cgcctcagcg acggcgactg cgtgctcgac
     3841 ctcggaacgc ttggcgaatg cgacgcgcgc ctgcacctca ccggtattgg gatcaaacac
     3901 gtcgccgaaa cgccccgatg cccctttcac ctcgatgccg ccgatgaaat ggccgatctc
     3961 gcgcatggga gtttctcctt gaaagccgaa cggcgttggg gccgcttcgc atggccattg
     4021 tgccgttttt ttccggaacg gtcacggggg ccccgtcgac caccggcagc ggcaatgtgt
     4081 cgtcggccag gccagagcga gattccgcgg caaggatttt ttgctatcct gccaaaaccg
     4141 tcatgggcgc aacttgcgag gcgcccgcgg cctttctagc gtttgggggc aaagataatg
     4201 gatattcggt atgcactgct cctcatccgc gagcgagcgc acctcgcagc gaggccgaca
     4261 gcgagcagcg tggcgcgttc ccattgcgcg ttggccgcgc tcgtggtcct ggtcgccggc
     4321 atggccgcac cttgcgtgcc ggcgctggcg gcggagcctc tcgcagtgct ccgcgaagac
     4381 aatccgagcg acccgaaaca gggcaagcgc tacgtcggct cgaccacttg gcgcaccgaa
     4441 agcagcccgc cggctgccgg tcgccccgcg gaagtagcac tgcgcgccga cgtggaaatt
     4501 cccgagcggc agattggcat gaagtggtcg ctgcgccgca ataccgacaa gagcatgccg
     4561 gccagtcaca tgatcgagat catattcaga ctaccgccca acgctccggg cggcggcgtc
     4621 gcccaggcgc caggcgtggt tatgaaatcg aaggaggacg cgcaaggcat gccgctttcc
     4681 ggcgctgccg ctacggtgac gaacgggttt ttcatcttcg cgctggcagc catcagcgct
     4741 ccgcagaatt tacagctgct caaggagcgg gaatggctcg acgtgccttt tgcctacgcg
     4801 aacggcactc gcgccgtgat cagctttgag aagggcgagc cgggtggccg cgctttcgcg
     4861 gaagcgttcg ccgcctggag caagtgagca cgctcatcgg catggtgcag atgttcgcca
     4921 acatgaccga tccgtcgaag ctcggcccgt tcatggccgt cgccctgctt gcaccttcta
     4981 cggcgaccgc gccaacgtgg tccgccagat tctcgaagcg gagggcatgc cttcggccaa
     5041 cttctacgcc gttgccggca aggccgacac cgatccgctg ttccctgacg acccgtttat
     5101 tgccgccaac cgccgcgtga ccatcacctt gatgcgggag gccccccggt cccgccggat
     5161 ctcaagccct aggcggccgt agccgccctt gcgccacgtc gccgccgtag acaattttgg
     5221 caggtcggac ccgccggcat cgcccactcg cgatcgccgg cgtcaatgcg tttgctttac
     5281 agaattcatg actcacgggc gcgaagagtg tataggcgcg gccctgcatc cccccgcgat
     5341 gcagcagcag gagcaggcga catcctgttt c
//
LOCUS       DATMQB010000028        12855 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_936596, whole genome shotgun sequence.
ACCESSION   DATMQB010000028 DATMQB010000000
VERSION     DATMQB010000028.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 12855)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12855)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12855
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_936596"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..473)
                     /gene="pal"
                     /locus_tag="VNY79_00945"
     CDS             complement(<1..473)
                     /gene="pal"
                     /locus_tag="VNY79_00945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-associated lipoprotein Pal"
                     /protein_id="HWX71042.1"
                     /translation="MKVMRIVRGVKFATVVLAALAIAGCAKQQIDQTAMAGSAAPGSQ
                     QDFVVNVGDRVFFETDSTELTPQARTTLDKQAQWLSNYGQYAFTVEGHADERGTREYN
                     IALGARRAQTVREYLVSRGVSAQRMRTISYGKERPVALCNDISCWSQNRRVVTVL"
     gene            complement(702..2048)
                     /gene="tolB"
                     /locus_tag="VNY79_00950"
     CDS             complement(702..2048)
                     /gene="tolB"
                     /locus_tag="VNY79_00950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011666081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Tol-Pal system beta propeller repeat protein
                     TolB"
                     /protein_id="HWX71043.1"
                     /translation="MLLSRPLDRRVTRRRALALGALAGGLTLSPRFAAAVVQLDVSQG
                     NFQPMPIGLPDFIGGTAGDGDTARGVTQIITANLRRCGLFAPIDPAAYIEKIASVDAV
                     PRFPDWRAINAQALVTGRMTRQNDGRLKAEFRLWDVVAGQQLAGQQYFTTPDNWRRIA
                     HIISDAIYERLTGEKGYFDSRVVFVDETGPAERRIKRLAIIDQDGANVRYLTRGDDLV
                     LTPRFSPSTQEITYMAYGQGDPRVYLLNIETNQREIVGNFPGMSFSPRFSPDGQRVIM
                     SLQEGGNSNIFVMDLRSKAMTRLTDTPAIDTAPSYSPNATQICFESDRGGKPQIYIMG
                     ASGGAAQRISFGDGSYSTPVWSPRGDYIAFTRQSGGKFAIGVMKPDGSGERVLTEGFH
                     NEGPTFAPNGRVIMFFRDPGGNAGPSLLTVDISGRNEQRVPTPSFASDPAWSPLLS"
     gene            complement(2068..3030)
                     /locus_tag="VNY79_00955"
     CDS             complement(2068..3030)
                     /locus_tag="VNY79_00955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolA"
                     /protein_id="HWX71044.1"
                     /translation="MALLWGLVAFVAKPNDAPAVEPLPVEFVSATEFSQLTAGVKNAP
                     KPLEQPKPLADKVGEPNPAKQLAAKVADKPDVITDSAPPPEPKPEPKQEPKPQAKAEP
                     KLEPKPAEKPEAKPEPKPAEKAEKPKQPEPKPDAIVEELKKEEAKKPPPKPPKKEPQF
                     KPDQIAEQLKRDESKKPSTRFDAHQVATLLDKRDPQRRLATAETLNGAVSLGAPNAHA
                     AQLSQSELDALRARLIQCWSPPPGVSVDSKLYVVLRVVFKPDGSLAHEPGVVEDSASS
                     LGPALSESAKRALMLCQPFTMLRPEHYDLWKDIEIKFNNELLGG"
     gene            complement(3066..3518)
                     /gene="tolR"
                     /locus_tag="VNY79_00960"
     CDS             complement(3066..3518)
                     /gene="tolR"
                     /locus_tag="VNY79_00960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0098567 - periplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0061024 - membrane organization [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolR"
                     /protein_id="HWX71045.1"
                     /translation="MAAPVVSAASTGRHKRRRHAVMSEINVTPFVDVMLVLLIVFMVS
                     APLLTVGVPLDLPQSQAKALDQDREPLTISVNLEGQVFLQNSEIKVDELVAKLKAVAD
                     ARGGTEARIYLRGDKKVDYGTMMRVMGRLSAAGFHRVALVTEIEQGGG"
     gene            complement(3539..4258)
                     /gene="tolQ"
                     /locus_tag="VNY79_00965"
     CDS             complement(3539..4258)
                     /gene="tolQ"
                     /locus_tag="VNY79_00965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019906798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein TolQ"
                     /protein_id="HWX71046.1"
                     /translation="MNPADIVPSALPLTSSDLSLFHLFWQAHWLVKTVMIGLIVCSVW
                     VWAIAIDKTLLFTRIRRTADRFEQAFWSGQSLEDLYKSLATKPGHSTAALFVAAMREW
                     KRSFEGHARSLAGLQMRIEKVMDVAIAREIEHMERRLLVLATVGSAGPFIGLFGTIWG
                     IMTSFQSIAASKNTSLAVVAPGIAEALFATAIGLIAAIPATIFYNKFQTDVNRQAQRL
                     EGFADEFTAILSRQIDERVQG"
     gene            complement(4642..5127)
                     /locus_tag="VNY79_00970"
     CDS             complement(4642..5127)
                     /locus_tag="VNY79_00970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2852 domain-containing protein"
                     /protein_id="HWX71047.1"
                     /translation="MVLVEKLDELGKPAWIALMILGFIVWWPLGLVTLAFILGSGRMA
                     MGCWGHHNDGSRWQHNMSRWQSKMERMQEKMDRLRGRMEQRGPSGPAWWGGELRSSGN
                     RAFDDYRTETLQRLEEEQREFKEFLERLRFAKDRAEFDQFMAERRNRPHDEAPQAQPS
                     S"
     gene            complement(5211..5867)
                     /locus_tag="VNY79_00975"
     CDS             complement(5211..5867)
                     /locus_tag="VNY79_00975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HWX71048.1"
                     /translation="MSWSKEDRESPRGYHHGNLKEALLRAALELIAQKGPAGFTFAEA
                     ARWAGVSPAAPYRHFRDRDELLGSIALRGFQQFETALAKAWDDGRPDVFTAFDRLGKT
                     YLQFARTEPAYYSAMFEAGIPPATSPELRDAGDRAFAVLRAAAEKLCAQVPTKSRPPV
                     LMVALHIWAMAHGVASLFGRGDAARRTLPMSPEELLEAEALIYLRGVGIAEANGASPP
                     "
     gene            complement(5914..6495)
                     /locus_tag="VNY79_00980"
     CDS             complement(5914..6495)
                     /locus_tag="VNY79_00980"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003908 -
                     methylated-DNA-[protein]-cysteine S-methyltransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HWX71049.1"
                     /translation="MTELGFALFDTPIDCCGIVWNGRGIAGVQLPETDRRAARNRILR
                     RFPGACEAVPPADVQRVVDDIAALLNGEPRDLGYAKIDTAALPDFHRRVYDVARTIPA
                     GATLSYGEIAERLGDRLLAREVGEALGQNPFPIIVPCHRVLAAGGKMGGFSARGGVRT
                     KLRLLSIEGAEPGGPTLFGVLPLSLRPRRHRST"
     gene            complement(6591..7061)
                     /gene="ybgC"
                     /locus_tag="VNY79_00985"
     CDS             complement(6591..7061)
                     /gene="ybgC"
                     /locus_tag="VNY79_00985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tol-pal system-associated acyl-CoA thioesterase"
                     /protein_id="HWX71050.1"
                     /translation="MTDASRVPLDGEIRDGRHFLAVRVYYEDTDFTGIVYHANYLRYM
                     ERGRTNYLRLIGADHRALFEATEREAPGFAFVVRSMTLDFLRPARMDDVLEIVTEPEV
                     VKGASITLHQRVNRGEELLVEASVRVAFISGGRARPIPKPLRIAMRADQEAVQS"
     gene            complement(7249..7671)
                     /locus_tag="VNY79_00990"
     CDS             complement(7249..7671)
                     /locus_tag="VNY79_00990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HWX71051.1"
                     /translation="MTGTSAVMMGGQMPLQDYEGGCHCGRVRFRVTGDLARVTECNCS
                     MCSKKGFLHLIVAPDAFELISGKDALTTYRFNTGTARHTFCATCGIHPFYVPRSDPDK
                     IDVNVRCLDGVDLAALKPHRFDGRNWEHASAEEVPWRS"
     gene            complement(7737..8786)
                     /gene="ruvB"
                     /locus_tag="VNY79_00995"
     CDS             complement(7737..8786)
                     /gene="ruvB"
                     /locus_tag="VNY79_00995"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041805491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HWX71052.1"
                     /translation="MGNPGRKLVTPERGEEDAAEASLRPQRLDEFIGQSQARANLGVF
                     ITAARARKEALDHVLFVGPPGLGKTTLAQIVARELGVNFRATSGPVIARAGDLAALLT
                     NLEERDVLFIDEIHRLNPAVEEILYPAMEDFQLDLIIGQGPAARSVKIDLAKFTLVGA
                     TTRAGLLTNPLRDRFGIPVRLNFYSAPELEAIVNRGARVLGIAVTADGANEIARRARG
                     TPRIAGRLLRRLRDFASVAGAAAIDRALADKALAALEVDAAGLDAMDRRYLMTIASNY
                     GGGPVGVETLAAALSEPRDAIEDIIEPYLIQCGFLQRTPRGRLITSHAFRHLGLPEPA
                     RDPAQFGLFGEGNGD"
     gene            complement(8786..9205)
                     /locus_tag="VNY79_01000"
     CDS             complement(8786..9205)
                     /locus_tag="VNY79_01000"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HWX71053.1"
                     /translation="MSKADNELIEAATAAIKQRYRYDWQEVGAALRTRSGEIFTGVNL
                     DAYLGRMAVCAEAVALGRAFVDLGNAGIDMIVAVRHPAPDEKDQRIAVVSPCGACREL
                     IFDYDQQARVIVPSGASAAVVPIGELLPNKYSRGPER"
     gene            complement(9220..9837)
                     /gene="ruvA"
                     /locus_tag="VNY79_01005"
     CDS             complement(9220..9837)
                     /gene="ruvA"
                     /locus_tag="VNY79_01005"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009379 - Holliday junction helicase
                     complex [Evidence IEA];
                     GO_function: GO:0009378 - four-way junction helicase
                     activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HWX71054.1"
                     /translation="MIGKLKGVIESYGGDSVILDVNGVGYLVHCSGRTLQELPRVGEP
                     ATLAIETYVREDQIRLFGFMTDAEREWFRLLQTVQGVGAKVALAVLGTLKPADLASAI
                     AMRDKAMVARTPGVGPKVAERIVTELKDKAPAYTNVDPALVRLSGALDERRAPQPVSD
                     AVSALVNLGYAQPQAAAAIAAAVRGAGDGAEAKTLIRLGLKELAK"
     gene            complement(9834..10340)
                     /gene="ruvC"
                     /locus_tag="VNY79_01010"
     CDS             complement(9834..10340)
                     /gene="ruvC"
                     /locus_tag="VNY79_01010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008821 - crossover junction DNA
                     endonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crossover junction endodeoxyribonuclease RuvC"
                     /protein_id="HWX71055.1"
                     /translation="MTRPIRILGIDPGLRRTGWGMVEVAGNRLGFLGCGSVTTRDEDT
                     LAARLLAIHDGLLRVLDEFRPDEAAVEATFVNKDAKATLKLGQARGIAMVVPARAGLP
                     VAEYAPNLVKKSIVGAGHGDKAQVRMMIGVLLPKADPSSHDAADALAIAVTHAHHRQS
                     VILKVAAR"
     gene            complement(10449..11195)
                     /locus_tag="VNY79_01015"
     CDS             complement(10449..11195)
                     /locus_tag="VNY79_01015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HWX71056.1"
                     /translation="MAGHSQFKNIMYRKGRQDAVKSKLFGKLAREITVSAKLGLPDPG
                     MNPRLRAAIIAARAENMPKDNIERAIKKAAGGEGDNYEEIRYEGYGPGGVAVIVEVLT
                     DNRNRTAGEVRSTFTKSGGSLAETGAVSFMFNHVGVIEYDAKAASAEAMFEAALEAGA
                     DDVVSSEHGHEVYVAQERFGSVAKVLEQKFGEPRKASLVWRPQNTVTIDDEQGEKLLK
                     LIENLNEHDDVQNVYANFEVSDALVQRMSA"
     gene            complement(11300..12121)
                     /locus_tag="VNY79_01020"
     CDS             complement(11300..12121)
                     /locus_tag="VNY79_01020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042578 - phosphoric ester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00282 family metallophosphoesterase"
                     /protein_id="HWX71057.1"
                     /translation="MRILFVGDVVGRSGRTIVTERLPGLIRDWKLDFVAINGENAAGG
                     FGITEAIYSEFIDAGADAVTLGNHAWDQKEALVFIERAPRLVRPLNYPAGTPGRGAAL
                     VEAKNGARVLVVNAMGRIFMDPLDDPFAAVDREIAACPLRRGADAVVIDMHAEATSEK
                     QSMGYFCDGRVSIVVGTHTHCPTSDLRVLSGGTAFMSDVGMTGDYDSVIGMAKDEPLT
                     RFLRRISSGRFEAASGPATLCAIALETDPATGLAARVAAVRLGGCLEQAVPAFWA"
     gene            complement(12124..12636)
                     /locus_tag="VNY79_01025"
     CDS             complement(12124..12636)
                     /locus_tag="VNY79_01025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71058.1"
                     /translation="MPPIPKWLEIQPDQIAELVQGVQAWGPTAIAFVVGLFVAFIGLR
                     QLRNGRQKLRLEMFDRRYSMYEATKLLIDKIAINGQVSSADLVEFRRNVRGAEFLFDG
                     EARKFFKSLIDLSMRADLARTKQARAKDETALGELFDEEDQYLKLVEAESPNLEKIFA
                     RYLDLSKMGI"
     gene            complement(12638..>12855)
                     /locus_tag="VNY79_01030"
     CDS             complement(12638..>12855)
                     /locus_tag="VNY79_01030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HWX71059.1"
                     /translation="PLLAFDRARHRLGYGGGYYDLTIAQLRGRKTIVAVGLAFAVQEV
                     FTVPVTPRDAPLDLVLTEREVIDFRDG"
BASE COUNT         2209 a         4209 c         4180 g         2257 t
ORIGIN      
        1 ttgaggaccg tcacgacgcg gcggttctgc gaccagcagg aaatgtcgtt gcacagcgcg
       61 accggccgtt ccttgccata cgagatggta cgcatgcgct gggccgacac cccgcgggag
      121 acgagatatt cgcgcacggt ctgcgcgcgg cgcgcgccga gggcgatgtt gtattcacgc
      181 gtgccgcgtt cgtcggcatg gccttcgaca gtgaacgcat attggccgta gttgctgagc
      241 cactgggcct gcttgtcaag cgtcgtccgc gcctgcggcg tgagctcggt ggaatcggtt
      301 tcgaagaata cccggtcgcc gacgttgacg acgaagtcct gctggctccc cggcgcggcg
      361 ctgcccgcca tcgcggtctg atcgatctgc tgcttggcgc acccggcaat cgccagtgct
      421 gccagcacga cggttgcgaa tttaacgccg cggacgatac gcattacctt catttccggt
      481 gcctccattg ttccgtcgtg accggacatg gctggtcccc ggggacgggt ctagcagcgc
      541 cttcgttaag cgaaggttcc gtcaaccttg atggggcctt gcaaaaaagc cttcgaccca
      601 ccgatcccct tgaaagcttt ggcagtggtt aataggccct gaatgcggca atgatgtggg
      661 tttcgggccg ccaatggcgc cctggcgcgc ctgacgggcc ctcacgacag cagcggcgac
      721 caggccgggt cggaggcgaa gctcggcgtc ggaacccgct gttcgttacg gccggagata
      781 tcgacggtta agagcgacgg cccggcattc ccgccagggt cacggaagaa catgatgacc
      841 cgcccattgg gcgcgaaggt cggcccttcg ttgtggaagc cttcggtgag gactctctcc
      901 ccagaaccgt ccggcttcat cacgccgatc gcgaacttac cccccgactg ccgggtgaag
      961 gcgatgtagt cgccgcgcgg ggaccacacc ggcgtcgagt aggagccgtc gccgaagctg
     1021 atgcgctgcg ccgccccgcc ggacgcaccc atgatataga tctggggttt gccgccgcgg
     1081 tccgactcga agcagatctg cgtggcgttg ggcgagtagg aaggcgcagt atcgatcgcc
     1141 ggggtgtccg tcagccgggt catggccttc gagcgcaggt ccatgacgaa gatgttggaa
     1201 ttgccgccct cctgcaggct catgatgacg cgctggccgt ccggagagaa ccgcggcgag
     1261 aagctcatgc cggggaagtt gccgacaatc tcgcgctgat tggtctcgat gttgaggaga
     1321 tagacgcgcg gatcgccctg gccgtaagcc atgtaggtga tctcctgcgt cgagggcgag
     1381 aagcgcggcg tcagcacgag gtcgtcgccg cgcgtaaggt aacggacgtt ggcgccgtcc
     1441 tgatcaatga ttgcgaggcg cttgatgcgg cgctctgccg gcccagtctc gtcgacgaac
     1501 acgacgcggc tgtcgaaata acccttctcg cccgtgagcc gctcgtagat ggcgtcggaa
     1561 atgatgtggg cgatgcggcg ccagttgtcc ggcgtcgtga aatattgttg cccggcgagc
     1621 tgctggccgg cgaccacgtc ccagagccga aactcggctt tgagccggcc gtcgttctgc
     1681 cgggtcatgc ggccggtaac gagcgcctgc gcgttgatgg cgcgccagtc gggaaagcgc
     1741 ggcacggcat cgacgctcgc gatcttctcg atgtaggcgg caggatcgat cggcgcgaac
     1801 aggccgcagc gccggagatt cgcggtgatg atctgggtga ccccacgtgc ggtatcgccg
     1861 tcgccggcgg tgccgccgat gaaatcgggc agcccgatcg gcatcggctg gaagttgccc
     1921 tggctgacgt cgagctgcac aactgcagcc gcaaagcgcg gagacagcgt caatccgccg
     1981 gcaagcgcgc cgagcgcgag tgcgcggcgg cgcgtgaccc ggcgatcaag tggacgcgaa
     2041 aggagcatct cctctgcgtt ggtccggtca gccaccgagc agctcgttgt tgaatttgat
     2101 ctcaatgtct ttccacaggt catagtgctc gggccggagc atggtgaacg gctggcacag
     2161 catcagcgcc cgcttggcgc tctccgacag cgccggaccg agcgaggacg ccgaatcctc
     2221 gacgacgccc ggttcatgcg ccagcgaacc gtcgggtttg aacacgacgc gcagcacgac
     2281 gtaaagcttc gagtccacgg agacgcccgg aggcgggctc cagcactgga tgaggcgcgc
     2341 acgcaacgca tcaagctcgc tctgcgacaa ttgcgcggcg tgggcgttgg gcgcgccgag
     2401 ggagaccgcg ccgttgagtg tttcggcggt cgcgaggcgc cgctgcgggt cgcgcttgtc
     2461 cagcagcgtc gcgacctgat gcgcgtcgaa cctggtcgac ggcttcttgc tttcgtccct
     2521 cttgagctgc tcggcgatct gatcaggctt gaattgcggc tccttcttcg gcggtttcgg
     2581 cggcggcttc ttcgcctcct ccttcttcag ctcttccacg atcgcatcgg gcttgggctc
     2641 cggctgcttg ggcttctcgg ccttttccgc cggcttcggc tccggctttg cttcgggctt
     2701 ctccgccggc ttgggttcga gcttcggctc cgccttcgcc tgcggcttgg gttcctgctt
     2761 gggttccggc ttgggctcgg gcggcggcgc gctgtcggtg atgacgtccg gcttgtccgc
     2821 gactttggcg gcaagctgct tggcgggatt gggctcacct actttgtcgg cgagcggctt
     2881 cggctgctcc agcggcttcg gcgcgttctt gacgccggcc gtgagctgcg agaactcggt
     2941 cgcggaaacg aactcgaccg ggagcggttc gaccgccggc gcgtcattcg gcttcgccac
     3001 gaaggcgacg agcccccata gcagcgccac ggcatggcct aggcacgata tggtcagccc
     3061 gggcttcatc ccccgccctg ctcgatctcc gtcaccagcg ccacccgatg gaagccggcc
     3121 gcggacagcc gccccatcac gcgcatcatc gtaccgtaat cgaccttctt gtcgccacgt
     3181 agatagatgc gggcttcggt cccgccgcga gcatcggcca cggccttgag cttcgccacc
     3241 agctcgtcga ccttgatctc gctgttctgc aggaacacct gcccctcaag gttcaccgag
     3301 atggtgagcg gctcgcgatc ctggtcgagc gccttggctt ggctctgcgg caggtcgagc
     3361 ggcacgccga ccgtgagcag cggcgccgaa accatgaaca cgatgagcag caccagcatg
     3421 acgtcgacga acggcgtcac gttgatctcg ctcatcactg catgccggcg gcgcttgtgc
     3481 ctgccggtgg acgcagcact gaccacgggc gctgccatgt ttctacccct tgcccgtcct
     3541 agccttgcac gcgttcgtcg atctgccgcg acaggatcgc cgtgaattcg tcggcgaagc
     3601 cttcgaggcg ttgcgcctgg cggttcacgt cggtctggaa cttattatag aaaatcgtcg
     3661 ccgggatggc ggcgatgaga ccgatcgcgg tcgcgaacag cgcctcggcg atgccgggcg
     3721 cgaccactgc gagcgaagtg ttcttggagg ccgcaatcga ctggaagctc gtcatgatgc
     3781 cccagatcgt gccgaacagg ccaatgaagg gacctgccga gccgaccgtc gccagcacca
     3841 gaagccgccg ctccatgtgt tcgatttcgc gggcgatggc gacatccatg accttctcga
     3901 tgcgcatctg cagcccggca agcgagcggg catggccctc gaagctcctt ttccattcgc
     3961 gcatggcggc gacaaacagc gccgcggtcg aatgacccgg cttggttgcg agggacttgt
     4021 agagatcctc cagggactgc ccggaccaga atgcttgctc gaaacggtcg gcggtccggc
     4081 ggatgcgcgt gaataacaag gttttgtcga tggcgatcgc ccagacccag accgagcaaa
     4141 cgatcagccc gatcatcacc gttttgacca gccaatgggc ctgccagaac agatggaaca
     4201 gcgacagatc ggaggatgtc aacggcaagg ccgacggcac gatgtcggca gggttcatgg
     4261 gcgcgtcctt tccccggtcg gggcttgcgc aaagccgcga ccttggacat gtccgggacc
     4321 acgccggtgc gtggacgaac gggtccttga gccgcccgcc aatcctgcgc gccgaccaga
     4381 cccgaaaatt tcacgaggac ccaagccgga cccgccaccg gcaggaccgg gaatcatcgc
     4441 caaacttgtc caaactaggg cgcaacaccc cgtcgctcgc gcctaacgaa gcccgcttat
     4501 cgttaatgcg gcgttaattc gcgagactcg caagcaggat cgtcgtgcag cgaggcaaaa
     4561 tggcacgggg tgaaatgcgc gggccgtccg ccccgggggg acggacggcc ctcaaaggcc
     4621 gccgatgccg cgcgagatca atcagctcga cggctgcgcc tggggagctt cgtcgtgcgg
     4681 acgattgcgc cgctcggcca tgaactggtc gaactcggcc cggtccttgg caaagcgcag
     4741 ccgctcgaga aattccttga actcgcgctg ctcctcctcg aggcgctgca gcgtctcggt
     4801 gcggtagtcg tcgaaggcgc ggttgccgct cgatcgcagc tcgccgcccc accatgcggg
     4861 accactcggt ccgcgctgct ccatgcggcc gcgcagccgg tccatcttct cctgcatgcg
     4921 ctccatcttc gactgccagc ggctcatatt gtgctgccag cggctgccat cgttgtgatg
     4981 accccagcat cccattgcca tgcgtccgct cccgagaatg aaggcgaggg tgaccaggcc
     5041 cagcggccac cacacgatga agccaaggat catcagcgcg atccaggccg gcttgccgag
     5101 ttcgtcgagc ttttcaacga ggaccatgac caggcctccc ttgtgaatgt aaataacatt
     5161 tacatcgtgt ctcgcggctg tcaagtagct cgcgacttcg tgaaggccgg ctatggcggg
     5221 gaagcgccat ttgcctccgc gatcccgacg ccgcgcagat agatcagcgc ctcggcctcc
     5281 agaagttctt ccggcgacat cggcagcgtc cgccgcgccg catccccacg cccgaacagc
     5341 gaagcgacgc cgtgcgccat cgcccaaata tgcagcgcga ccatgagcac cggcggccgg
     5401 ctcttggttg gcacctgcgc acatagcttt tccgccgccg cgcgcaagac cgcgaaggcg
     5461 cgatcgccgg cgtctcgcag ttccgggctg gtagcaggcg gaatgccggc ttcgaacatc
     5521 gccgaatagt aggcgggctc ggttcgcgcg aattgcagat aggtctttcc gaggcggtcg
     5581 aaggcggtga agacgtcggg gcggccatca tcccatgcct tcgccaacgc cgtttcgaat
     5641 tgttggaagc cgcgaagcgc gatgctcccc aaaagctcgt cacggtcgcg gaaatggcga
     5701 tagggcgctg ctggactcac tcccgcccag cgcgccgcct cggcgaacgt aaagccggcc
     5761 gggcccttct gcgcaatcag ttcgagcgcg gcgcgcagca gcgcttcctt gagattgccg
     5821 tgatggtagc cgcgcgggct ctcccggtct tcttttgacc agctcatgta aatagcttta
     5881 acattaatcc ggccggcgcg tcgaccaaac tcgtcaagta gatcgatgcc gccgtggccg
     5941 cagggaaagc ggcaacaccc cgaacagcgt cgggccgccc ggctccgcgc cttcgatcga
     6001 gagcaagcgc agcttggtgc gcacgccgcc gcgggcagaa aatccgccca ttttaccccc
     6061 cgccgccagc acgcgatggc aaggcacgat gatcgggaac ggattttgcc cgagcgcttc
     6121 accgacctcg cgggcaagca accgatcgcc cagccgctcg gcgatctcgc cgtaggacaa
     6181 tgtcgcgccc gccggaatgg tccgcgccac gtcatagacg cggcggtgaa aatcgggcag
     6241 tgcggccgta tcgattttcg cgtagccgag gtccctcggc tctccattca gcaacgcggc
     6301 gatgtcgtcg acaacgcgct gcacatccgc tggcggaacg gcctcgcacg cgccggggaa
     6361 gcgccgcagg atgcgattgc gcgcggcgcg ccgatcggtt tcaggaagct gcacgccggc
     6421 tatgccgcgc ccattccaaa cgatgccgca gcagtcgatc ggcgtatcga acagcgcgaa
     6481 gcccaactca gtcatcacat cgctcttcga gccagtcata tcgctaaaga taggctgtgc
     6541 gcacgcaaca tccacccgat tccggcagat cgccgaagcg aaactcactt tcaggattgc
     6601 accgcttcct gatcggcgcg catggcgatg cgcagcggct tcgggatcgg ccgcgcccgg
     6661 ccgccgctga tgaaggcgac gcgcacgctc gcctcgacca gaagttcctc gccccgattg
     6721 acgcgctgat gcagggtgat cgaggcgcct ttcaccactt cgggctcggt gacgatctcg
     6781 agcacgtcgt ccatgcgcgc gggcctaaga aaatcgagcg tcatcgaacg cacgacgaag
     6841 gcaaatcccg gagcctcccg ttcggtcgcc tcgaacagcg cgcgatggtc ggcgccgatg
     6901 agccgcagat aattggtgcg gccgcgctcc atgtagcgca ggtagttggc gtgatagacg
     6961 atgccggtga agtcggtgtc ctcgtagtag acgcggaccg cgagaaagtg acggccgtcg
     7021 cgaatctcgc cgtcgagggg aacgcggctc gcatcagtca tcgtttgaat tctcttcggc
     7081 tcatggtccg tcagcccgag gggctcggcg ccatagcagg cgcagcctgc gtacacttgg
     7141 ctgcgatgcg ccgagcctcg aaggacgacg gctgcagcgc ttcggcatgc atccttcgag
     7201 gcgcgcctgc ggcgcgcacc tcaggatgac gacgatcgac aaacgcgatc acgatctcca
     7261 cggcacctcc tccgcgctcg cgtgctccca attgcggcca tcgaatcggt gcggcttgag
     7321 agcggcgaga tcgacgccgt cgaggcaacg gacgttgaca tcgatcttat ccggatcgga
     7381 gcgcggaacg tagaacggat ggatgccgca ggtggcgcag aaggtatggc gcgccgtgcc
     7441 ggtgttgaac cggtaagtgg tcagcgcatc cttgccgctg atgagttcga acgcgtcggg
     7501 cgcgacgatg agatgcaaaa agcctttctt gctgcacatc gaacaattgc attcggtcac
     7561 gcgcgcaaga tcgccggtca cgcgaaagcg cacgcgcccg caatgacagc ctccttcgta
     7621 gtcttgcaac ggcatttgtc cgcccatcat gaccgcgctt gtcccggtca tcgacgtcct
     7681 ctttggttca accgatgcag caatggatag cggcgcaagg ccaaacgtga cgaactctaa
     7741 tcgccattac cctcgccgaa caacccgaac tgcgccggat cgcgcgccgg ctccggcagc
     7801 ccgagatggc ggaaggcgtg gctggtgatc agccggccgc gcggcgtgcg ctgcaggaag
     7861 ccgcactgga tgaggtaggg ctcgatgatg tcttcgatgg cgtcgcgcgg ctcggacaag
     7921 gcggccgcaa gcgtctcgac cccgaccggg ccgccgccgt aattcgacgc gatcgtcatg
     7981 agatagcggc ggtccatggc gtcgaggccg gcggcgtcga cctcgagcgc ggccagcgcc
     8041 ttgtcggcta gcgcacggtc gatcgcggcg gcgccggcga cggaagcgaa atcgcgcagc
     8101 cggcgcaaca gccgtccggc gatgcgcggc gtgccgcgcg cacgccgcgc gatctcgttg
     8161 gcgccgtcgg cggtcacggc gatgccgagc acgcgcgcac cgcgattgac gatcgcttca
     8221 agctcgggcg cggaatagaa gttcagccgc accgggatgc cgaagcggtc gcgcagcgga
     8281 ttggtgagga gcccggcgcg cgtggtcgcg ccgacgagcg tgaacttggc gagatcgatc
     8341 ttgaccgagc gcgccgccgg tccctggccg atgatcaggt cgagctgaaa atcctccatg
     8401 gccggataga ggatttcctc gaccgccgga ttgagccggt ggatctcgtc gatgaacagc
     8461 acgtcgcgct cctcgagatt ggtgaggagc gcagcgagat cgccggcccg ggcgatgacc
     8521 ggccccgacg tggcgcggaa gttgacgccg agctcgcgcg ccacgatctg ggcgagcgtt
     8581 gtcttgccga gcccgggcgg gccgacgaac agcacgtggt cgagcgcttc cttgcgcgcc
     8641 cgtgcggcgg tgatgaacac gccgagattg gcgcgcgcct ggctttggcc gatgaactcg
     8701 tcgaggcgct gcgggcgcag cgacgcttcc gccgcgtcct cctcgccgcg ctcgggcgtc
     8761 accagcttgc gtccgggatt gccgatcacc gctccggccc ccggctgtat ttgttgggaa
     8821 ggagttcgcc gatcggcacc accgccgccg aagccccgct cggcacgatc acgcgcgcct
     8881 gctgatcgta gtcgaagatg agctcgcggc aggcgccgca gggcgacacc acggcgatcc
     8941 gctgatcctt ttcatcgggg gcgggatgac gtaccgcgac gatcatgtcg atgcccgcat
     9001 tgccgagatc gacgaaggcg cgaccgagcg cgaccgcttc ggcgcagacc gccatgcggc
     9061 cgagataggc gtcgagattg acgccggtaa aaatttcgcc ggaacgggtg cgcagcgccg
     9121 cgccgacctc ctgccagtca taacggtagc gctgcttgat cgccgcggtc gcggcttcga
     9181 tcaattcatt gtccgctttg ctcaagcgcg tgcgacgttt cacttcgcca gttccttcag
     9241 cccgagccgg atcagcgttt tcgcctccgc cccatcgccg gctcccctta ccgcggcggc
     9301 gatggcggcg gccgcctgcg gctgcgcata gccgagattg accagcgcgg agaccgcatc
     9361 gctgaccggc tgcggggcgc gccgttcgtc gagcgcgccg gagagccgca ccagcgccgg
     9421 atcgacgttg gtgtaggccg gcgccttgtc cttgagttcg gtgacgatgc gctcggcgac
     9481 cttggggccg acgcccggcg tccgcgccac catcgccttg tcgcgcatgg caatggcgga
     9541 ggcgagatcg gcgggcttga gcgtgccgag gaccgcaagc gcgaccttgg cgccgacgcc
     9601 ctgcaccgtt tgcagcagcc ggaaccattc gcgctcggcg tcggtcatga aaccgaacag
     9661 gcggatctga tcctcgcgta cgtaggtttc gatggcgagc gtcgcgggct cgcccacgcg
     9721 cggcagttcc tgcaacgtcc gccccgagca atgaacgaga tagccgacgc cgttgacgtc
     9781 gaggatgacg gaatccccgc catagctttc gatcacgccc ttgagcttgc cgatcatcgt
     9841 gccgccacct tgaggatcac gctctgccgg tgatgcgcgt gcgtcacggc gatggcgagt
     9901 gcgtcggccg cgtcgtgcga ggacgggtcg gccttcggca gcagcacgcc gatcatcatg
     9961 cgcacctgcg ccttgtcacc atggccggcg ccgacgatgc tcttcttcac caggttgggc
    10021 gcgtattcgg cgaccggtag gccggcgcgc gccggcacca ccatggcgat cccgcgcgcc
    10081 tggccgagct tgagcgtcgc ctttgcgtcc ttgttcacga acgtcgcctc gaccgcggcc
    10141 tcatccggac ggaattcgtc gagaacccgg agcaacccgt catgaatggc gagaagccgc
    10201 gccgcaagcg tatcctcgtc ccgcgtcgtc accgagccgc agccgagaaa gccaagccgg
    10261 ttgccggcaa cctccaccat gccccacccg gtgcggcgga ggcccggatc gatgccgagg
    10321 atgcgaatcg ggcgcgtcat gcagccttgg tgatagaccc gtcggcgcca gcgggcaaag
    10381 cgtggcgaag gttttagcct atcgtcacag ccgggaatgc cgctgaaatc cggatgaggc
    10441 gatcaccgct acgcgctcat cctttgcacc agggcgtccg acacctcgaa attggcatag
    10501 acgttctgca catcgtcgtg ctcgttcaag ttctcgatca gctttagaag cttctcgccc
    10561 tgctcgtcgt cgatcgttac ggtgttctgc ggacgccaga cgagcgacgc cttgcgcggc
    10621 tcgccgaatt tttgctccag caccttggcg accgagccga accgctcctg ggcgacgtag
    10681 acctcatggc cgtgttcgct cgacaccacg tcgtcggcgc cggcctcaag ggcggcttcg
    10741 aacatcgcct cggcactcgc cgccttggcg tcgtactcaa tgacgccgac gtggttgaac
    10801 atgaacgaga ccgcgccggt ctcggctaga ctgccgccgc tcttggtgaa ggtcgagcgt
    10861 acctcgccgg cggtgcggtt gcgattgtcg gtcaagacct cgacgatcac cgcgaccccg
    10921 cccggcccgt agccctcgta gcggatctcc tcgtagttgt cgccctcgcc gcccgccgcc
    10981 ttcttgatgg cgcgctcgat gttgtccttg ggcatgttct ccgcacgcgc cgcgatgatc
    11041 gccgcgcgca gccgtggatt catccccgga tcgggcaggc cgagcttggc ggaaacggtg
    11101 atttcgcgcg cgagcttgcc gaacagcttc gattttaccg cgtcctgccg ccccttgcgg
    11161 tacatgatgt tcttgaactg cgaatgtccg gccatggctc ttctctgcgc ccgctcgcgc
    11221 ccgcgacgtg ggaatgaatt gatgccttaa gtttataggg tggcagagcg aggaaataaa
    11281 gacgcgcggc gccgggaact caagcccaga aggcgggaac ggcctgctcg aggcagccgc
    11341 cgagccgcac cgcggcgacg cgggcggcga gcccggtcgc tgggtcggtt tcgagcgcaa
    11401 tcgcgcacaa cgtcgccggg cccgaagccg cctcgaagcg cccggatgag atgcgccgca
    11461 ggaagcgcgt gagcggctca tccttggcca tgccgatcac ggaatcgtag tcgccggtca
    11521 tgccgacgtc gctcataaag gcggtgccgc cggaaagcac gcgcaggtcc gaggtcgggc
    11581 aatgagtatg ggtgccgacc acgatgctca cgcggccgtc gcagaaatag cccatcgact
    11641 gcttctcgct cgttgcctcg gcgtgcatgt cgatgacgac ggcgtcggcg cccctgcgca
    11701 gcggacaggc agcgatttcg cgatcgacgg cggcgaacgg atcgtcgagc gggtccatga
    11761 agatgcggcc catggcgttg accacgagga cccgcgcgcc gttcttggcc tcgaccagcg
    11821 cagcgccgcg gcccggcgtg ccggcggggt agttgagcgg ccgcaccagg cggggcgcac
    11881 gttcgatgaa gaccagcgcc tctttctggt cccaggcatg attgccgagc gtgacggcgt
    11941 cggcgccggc atcgatgaat tcgctataga tcgcctcggt gatgccgaac ccgccggcag
    12001 cgttctcgcc gttgatggcc acgaaatcga gcttccagtc gcggatcagg cctggcaggc
    12061 gctcggtgac gatggtccgc ccgctgcggc caaccacgtc gccgacaaac agaatccgca
    12121 tgctcagatg cccatcttgg aaaggtcgag gtatcgggcg aagattttct ccaaattcgg
    12181 gctctcggcc tcgaccagct tgaggtattg atcctcttcg tcgaaaagtt cgccgagcgc
    12241 ggtctcgtct ttggcccggg cctgcttggt gcgcgccaga tcggcgcgca tcgacagatc
    12301 gatcaggctc ttgaagaact ttcgcgcttc gccatcaaac aagaactcgg ctccccggac
    12361 attgcggcga aattcaacaa gatcggccga cgaaacctgg ccgttgatgg cgatcttgtc
    12421 gatcagcaat tttgtcgctt catacatcga ataacgccga tcgaacatct ccagccgcaa
    12481 tttctgcctg ccgttgcgca attggcgcaa cccgatgaag gcgacgaaga gaccgactac
    12541 gaaggcgatc gccgttgggc cccatgcctg aacgccttga acgagttcgg caatttgatc
    12601 gggctgtatt tccaaccatt tcggaatcgg cggcatttca accatctcga aaatcgatga
    12661 cctcgcgctc ggttagcaca agatcgagcg gagcgtcgcg cggcgtcacc ggcacagtga
    12721 agacctcctg aactgcaaac gccaagccga cggcgacaat ggtcttacgc ccgcgcagtt
    12781 gggcaattgt gagatcgtag tagccgccgc cgtagccgag acgatggcgg gcgcggtcaa
    12841 aggcgaggag cggcg
//
LOCUS       DATMQB010000029         6912 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_317150, whole genome shotgun sequence.
ACCESSION   DATMQB010000029 DATMQB010000000
VERSION     DATMQB010000029.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6912)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6912)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6912
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_317150"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..437)
                     /gene="ribH"
                     /locus_tag="VNY79_01035"
     CDS             complement(<1..437)
                     /gene="ribH"
                     /locus_tag="VNY79_01035"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA];
                     GO_function: GO:0000906 - 6,7-dimethyl-8-ribityllumazine
                     synthase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HWX71060.1"
                     /translation="MAGPRRGKRAKGEAKGARILLVEARFYDDIADALLAGAMKVLDE
                     AQAKVDRISVPGSLEIPAAIAMALDAAQRKRRPYDGAVALGCVIRGDTIHFDIVSHQS
                     ARGLMDIAIARALPLGNGIITVDTEAQALARARPEEQDKGGDAA"
     gene            complement(628..1461)
                     /locus_tag="VNY79_01040"
     CDS             complement(628..1461)
                     /locus_tag="VNY79_01040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HWX71061.1"
                     /translation="MQELAGKTAFVTGGASGIGLALGRAFAEAGMQVMLADIETEALA
                     AAVKSLHNFGPDVRGVTCDVTDPESVERAAAASHEAFGNVHVVCNNAGVAGGSGIDDI
                     LLDDWRWVLDVNLMGVLHGIRTFLPLIRAHGEGGHIVNTASMAGMVSGLGFSPYSASK
                     FAVVTMSEGLALHLKPLGIGVTVLCPGWVRTRINESARNRSERYGAGRAPEPGTWGSE
                     IAAHVGERIQSGLDPSDVAARVLTAIRNDDLYVFTHPEMRVAAEERFAAILAAMEKAG
                     R"
     gene            complement(1484..2107)
                     /locus_tag="VNY79_01045"
     CDS             complement(1484..2107)
                     /locus_tag="VNY79_01045"
                     /EC_number="2.5.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="riboflavin synthase"
                     /protein_id="HWX71062.1"
                     /translation="MFTGIVSDIGEILDVSEQAEGLRRLTIGSGYDPETIDIGASIAC
                     AGICLTVVARGRQAGGAAFSVDAAAETLRVTTAGSWRRGTKLNLERSLRLGDELGGHL
                     VTGHVDGIAELLARDDLPEMARLSLRTPAALARFIAPKGSVALDGVSLTVNEVDEDRF
                     SVLIIPHTLKVTTFGALRVAARLNLEVDLMARYAARLLQAPQSNASR"
     gene            complement(2113..3198)
                     /gene="ribD"
                     /locus_tag="VNY79_01050"
     CDS             complement(2113..3198)
                     /gene="ribD"
                     /locus_tag="VNY79_01050"
                     /EC_number="1.1.1.193"
                     /EC_number="3.5.4.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008703 -
                     5-amino-6-(5-phosphoribosylamino)uracil reductase activity
                     [Evidence IEA];
                     GO_function: GO:0008835 -
                     diaminohydroxyphosphoribosylaminopyrimidine deaminase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     diaminohydroxyphosphoribosylaminopyrimidine
                     deaminase/5-amino-6-(5-phosphoribosylamino)uracil
                     reductase RibD"
                     /protein_id="HWX71063.1"
                     /translation="MVLALALGRRGLGRTWPNPAVGAVIVRRDGGPPRIVGRGWTQPG
                     GRPHAEIEALRRAGEAARGADLYVILEPCSHHGKSPPCADAVIAAGVARVVSAIEDPN
                     PEVAGAGHARLRAAGVAVDVGIGAEEARRDHAGHLRRMRDGRPHVALKLAISADGKAA
                     AAGRKPVAITGEATRDRVHLMRAQSDAVMIGIGTALADDPMLTCRLPGMAAFSPVRIV
                     LDSGLRLPLGSRLVQSAREVPVWAVAGAQASRSAENALTAEGVTVLRVAHAHGRLDLA
                     GALKLIAARGITRLMVEGGPILAAALLAADLIDEAVLFHSPTVVGANGVDALEGMALA
                     ALTESPRFKCVASESVGADTRMVLERR"
     gene            complement(3237..3713)
                     /gene="nrdR"
                     /locus_tag="VNY79_01055"
     CDS             complement(3237..3713)
                     /gene="nrdR"
                     /locus_tag="VNY79_01055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0140110 - transcription regulator activity
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HWX71064.1"
                     /translation="MRCPSCGSLDTQVKDSRPTEDSSVIRRRRVCLSCNFRFTTFERV
                     QLRELIVIKRNGRRVPFDRDKLLRSVQVALRKRPVEPERIDQMVSKIVRELEGLGESE
                     VSSETIGETVMAYLRELDDVAYVRFASVYRNFREAKDFEAALAELSADEAAEIARK"
     gene            complement(3723..5027)
                     /gene="glyA"
                     /locus_tag="VNY79_01060"
     CDS             complement(3723..5027)
                     /gene="glyA"
                     /locus_tag="VNY79_01060"
                     /EC_number="2.1.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004372 - glycine hydroxymethyltransferase
                     activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0070905 - serine binding [Evidence IEA];
                     GO_process: GO:0019264 - glycine biosynthetic process from
                     serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HWX71065.1"
                     /translation="MSVTQSALSTVEGFFAASLAESDPGIADAIRRELRRQRDEIELI
                     ASENIVSRAVLEAQGSVLTNKYAEGAPGRRYYGGCQFVDIAETLAIERATRLFGCAFA
                     NVQPHSGASANAEAFMALMQPGDTFMGLNLAAGGHLTHGSPVNLSGRWFKVVPYGVRR
                     EDHQIDMDEVLQLAKQHRPKVIIAGGSAYPRILDFRRFREIADEVGAWLMVDMAHFAG
                     LVAGGAHPSPFPHAHVVTTTTHKTLRGPRGGAILANDEELAKKLNSAVFPGMQGGPLM
                     HVIAAKAVAFGEALRPSFRLYAKNVVENAKALAETLKSCGLDIISGGTDTHLMLVDLR
                     RKRLTGKAAEAALGRAHITCNKNGIPFDPEKPTVTSGVRLGTPAGTTRGFGIAEFRQI
                     GDLIAEVLDALARSGTEQDAQAEASARDKVKRLVGRFPIYEG"
     gene            complement(5271..6635)
                     /locus_tag="VNY79_01065"
     CDS             complement(5271..6635)
                     /locus_tag="VNY79_01065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004834 - tryptophan synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrpB-like pyridoxal phosphate-dependent enzyme"
                     /protein_id="HWX71066.1"
                     /translation="MSDQLKYVLDETQIPKTWYNLAADLPQPLPPVLHPGTKQPVGPA
                     DLEPLFPMALILQEVSAERTIDIPEPIRDVYRMWRPSPLIRARRLERALDTPAKIYFK
                     YEGVSPAGSHKPNTAVPQAWYNKEQGVTRLSTETGAGQWGSALAFAGSLFGLEVTVFQ
                     VRVSYDQKPYRRALMETYGARCIASPSKETDSGRAILAKNPDSPGSLGIAISEAVEMA
                     AKDPAVKYSLGSVLNHVLLHQTVNGQEAIKQFEMAGDDPDVVIGCTGGGSNFAGLAFP
                     FLGLQLRGGRKRRIIAVEPAACPSLTRGKYAYDFGDTAHLTPLVKMHTLGSTFIPPGF
                     HAGGLRYHGMAPMVSHIHALGLIEARAYHQKTCFDAGVQFARCEGIVPAPEAAHAVRC
                     AVDEALRCKKEGKAEVILFNMSGHGHFDMSAYINYFEGKLVDQAYDEADLAMALAGLP
                     SVAA"
BASE COUNT         1140 a         2349 c         2303 g         1120 t
ORIGIN      
        1 gccgcatcgc cgcccttgtc ctgctcttcc gggcgggcac gggcgagcgc ctgcgcctcg
       61 gtgtcgacgg tgatgatgcc gttgccgagc ggcagcgcac gagcaatcgc gatatccatc
      121 agcccgcgcg ccgactgatg cgacacgatg tcgaaatgga tggtgtcacc gcggatcaca
      181 cagccgagcg cgacggcgcc atcgtagggg cggcgcttgc gctgcgccgc atccagcgcc
      241 atggcgatcg cggcggggat ttcgagcgag cccggcacgc tgatgcgatc gaccttggcc
      301 tgcgcctcat cgagcacctt catggccccg gcaagcagcg cgtcggcgat gtcgtcgtag
      361 aagcgcgcct cgaccaggag gatgcgcgcg cccttggctt cgcctttcgc ccgcttgcct
      421 cgccgcggcc cggccatcgc tgcgctccac tgcactgaac atgatctcgt ccgcaagccg
      481 gtcgccacct ctgcggatca tgccggcgtg gtcgtagcaa gggcgggaag ggcgaacaag
      541 cgcggcggtc atcctgagcg ccgacagaat ctcctttctt tcgtcggcaa acagcttacg
      601 cagacgcacg tggctcggtc tgcccggcta ccgacccgct ttttccatgg ccgcgaggat
      661 ggcagcaaat cgctcctcgg cggcgacgcg catctccgga tgggtgaaca cgtagagatc
      721 gtcgttgcgg atcgccgtga gcacgcgcgc tgcgacatcg gacgggtcga gcccggactg
      781 gatgcgttct ccaacgtgcg ccgcgatttc gcttccccaa gtacccggct ctggtgcccg
      841 ccccgcgccg taacgctccg accggttgcg cgcgctctca ttgatgcggg tgcgcaccca
      901 tccgggacag agcacggtca cgccgatgcc gagcggcttg aggtgcaggg caagaccctc
      961 cgacatggtc acgacggcga acttgctcgc cgaatacgga ctgaacccca gcccgctgac
     1021 cattccggcc atggaggcgg tgttgacgat atggccgcct tcgccgtggg cgcggataag
     1081 cggcaggaac gttcggatgc cgtgcagcac gcccatcaga ttgacgtcga gcacccagcg
     1141 ccaatcgtcg agcaaaatgt cgtcgatgcc gctaccgccg gcgacgccgg cattgttgca
     1201 aacgacgtgc acattgccga acgcctcgtg tgacgccgcg gccgcgcgct cgacactctc
     1261 gggatcggtc acgtcgcagg tcaccccgcg cacatccggc ccgaaattgt gcaggctctt
     1321 gaccgcagcc gccaaagcct cggtctcgat atcggcgagc atcacctgca tgcctgcttc
     1381 cgcgaacgcg cgaccaagcg cgagcccgat gccgctcgcg ccaccggtca cgaacgcggt
     1441 cttgccggca agctcttgca tgagtctttc tccctgcccg ttgtcagcgc gacgcgtttg
     1501 attgcggcgc ctgcagcagc cgcgcggcat agcgcgccat gagatcgact tcgaggttga
     1561 gccgagccgc cacgcgcagc gccccgaagg tggtgacctt cagcgtgtgc ggaatgatca
     1621 gcacggaaaa gcgatcctcg tcgacctcgt tcacggtgag cgagacgccg tcaagcgcaa
     1681 ccgagccctt gggcgcgatg aaccgcgcca gtgcggccgg cgtgcgcagc gacaggcgcg
     1741 ccatttcggg gagatcgtcg cgtgccagaa gttcggcgat gccgtcgaca tgaccggtca
     1801 cgaggtgccc gccgagttcg tcgccgagcc gcagcgagcg ctcgagattg agcttcgtgc
     1861 cgcgccgcca ggagccggcc gtcgtgaccc gcagcgtttc cgcagccgcg tcgaccgaga
     1921 aggcggcccc gcccgcttgg cgcccacggg cgacgaccgt gaggcaaatc ccggcgcacg
     1981 caatcgaggc gccaatgtcg atcgtctccg ggtcatagcc ggagccgatg gtcaggcggc
     2041 gcaggccttc ggcctgctcg ctgacatcaa gaatttctcc tatgtcgctg acaatgcccg
     2101 tgaacacggc tgtcaccttc gctcaaggac catgcgggta tcggccccga cggattcgct
     2161 cgccacgcat ttgaaccgcg gcgattccgt caacgctgca agcgccatcc cttcgagggc
     2221 gtcgacgcca ttggccccaa cgaccgtcgg cgagtggaag aggacggcct cgtcgatgag
     2281 atcggcggca agcaaggcgg cggcaaggat cgggccgccc tccaccatca gccgggtgat
     2341 gccgcgcgcg gcgatgagct tgagcgcgcc ggcaagatcg agccgtccat gggcgtgtgc
     2401 tacccgcagc acggtgacgc cttccgccgt caacgcgttc tcggcgctgc gtgaggcctg
     2461 cgccccggca accgcccata ccggcacctc gcgtgcgctc tgcacgagac gcgagccgag
     2521 cggaagccgc agaccgctgt cgaggacgat gcggacgggc gaaaatgcgg ccatgcccgg
     2581 caagcggcag gtcagcatcg gatcgtcggc gagcgccgtg ccgatgccga tcatgacggc
     2641 gtcgctctgc gcgcgcatga gatgcacgcg gtcgcgcgtc gcctcgccgg tgattgcaac
     2701 cggcttgcgc cccgccgcgg cggccttacc gtcagccgag atcgcgagct tcagtgcgac
     2761 atgcggacgt ccgtcgcgca tgcgccgcaa gtggccagca tgatcgcgac gcgcttcctc
     2821 ggcgccaatg ccgacatcga cggcgacgcc ggccgcgcgc agccgcgcgt ggccagcgcc
     2881 agcaacctcg gggtttggat cttcgatcgc cgagacgacc cgggccacgc ccgcggcgat
     2941 gaccgcgtcg gcgcacggcg gcgacttgcc gtggtgcgag cacggctcga ggatgacgta
     3001 gaggtcggcg ccgcgcgcgg cctcgccagc gcggcgcaag gcctcgatct cagcatgcgg
     3061 ccggccgccg ggctgggtcc aaccgcggcc gacgatccgc ggcgggccgc catcgcggcg
     3121 aacaatgaca gcgccgaccg cggggttggg ccaagtgcgg ccgagcccgc gccggcctag
     3181 tgcgagcgcg agcaccatga atctgcgatc ctcttcgcga ccctcgccgc ccgcgctcac
     3241 ttgcgcgcga tctccgccgc ttcatccgcc gacagctcgg cgagcgcggc ctcgaaatcc
     3301 ttggcctcgc ggaaattgcg atagaccgaa gcgaagcgca cataggcgac gtcgtcgagc
     3361 tcacgcagat aggccatcac cgtttcgccg atggtctccg aggacacttc gctttcgccg
     3421 agcccctcaa gctcgcgcac gatcttcgag accatctgat cgatgcgctc gggctcgacc
     3481 ggccttttgc gcagcgcgac ctgtaccgag cgcaacagct tgtcgcgatc gaacggcacg
     3541 cgccggccgt tgcgcttgat gacgatgagt tcgcgcaact gcacgcgttc gaaggtggtg
     3601 aagcggaaat tgcaggacag gcagacgcgg cggcggcgga tgacggacga atcttccgtc
     3661 ggccgcgaat ccttcacttg ggtatcgagg cttccacaac tcggacagcg catgccttga
     3721 ccctacccct cgtagatcgg gaaccggccg accaggcgct tgactttgtc gcgcgcgctt
     3781 gcctcggcct gtgcgtcttg ctcggttccc gagcgcgcca gcgcgtccag cacctcggcg
     3841 atcaagtccc cgatctgccg gaactcggcg atgccgaagc cccgagtggt gccggccggt
     3901 gtgccgagcc gcaccccgga cgtgaccgtg ggcttttccg gatcgaacgg aatgccgttc
     3961 ttgttgcagg tgatgtgcgc ccggccgagc gccgcctcgg ccgcctttcc ggtcaggcgc
     4021 ttcctccgca gatcgaccag catgagatga gtatcggtgc cgccggagat gatatcgaga
     4081 ccgcaggatt tcagggtttc cgcaagcgcc ttcgcgttct cgactacgtt cttcgcgtaa
     4141 agcctgaacg agggccgcag cgcctccccg aacgccaccg ccttggccgc gatcacgtgc
     4201 atgagcggcc cgccctgcat gccgggaaac acagcggaat tgagcttctt cgccagctct
     4261 tcgtcgttgg cgaggatcgc gccgccgcgc ggcccgcgca gcgtcttgtg ggtcgtggtc
     4321 gtcaccacat gcgcatgcgg gaacggcgaa ggatgcgcgc cgccggcgac gagcccggcg
     4381 aaatgcgcca tgtcgaccat gagccaggcg ccgacctcgt cggcgatctc gcggaagcgg
     4441 cgaaagtcga ggatgcgcgg gtaagccgag ccgccggcga tgatcacctt gggccgatgc
     4501 tgtttcgcca gctgcagcac ttcgtccatg tcgatttgat ggtcctcgcg ccgcacgccg
     4561 tacggcacga ctttgaacca gcggcctgac agattgaccg gcgagccgtg cgtgagatgg
     4621 ccgccggcgg cgaggttgag gcccatgaag gtatcgccgg gctgcatcag cgccatgaac
     4681 gcttcggcat tggcggaggc gccggaatgc ggctgcacgt tggcgaaggc gcagccgaat
     4741 agccgggtgg cgcgttcgat ggcgagcgtc tccgcaatat cgacgaactg gcaaccgccg
     4801 tagtagcgcc ggcccggcgc gccctcggca tatttgttgg tcaggaccga gccttgcgcc
     4861 tcgagcacgg cgcggctgac gatgttttcc gacgcgatca gctcgatctc gtcgcgctga
     4921 cgtcgaagct cgcggcggat ggcatcggcg attccgggat cgctttccgc gagcgaagcg
     4981 gcgaagaatc cctcgacagt cgatagtgcg ctttgagtaa ccgacatctc ctgctcctga
     5041 gcggaaagga ccgcgaccca ctgacggctg agcgctcgcc gatatcacac cagcggccga
     5101 gcgcaagggc ttgggactat tcttcgtcta ttccccctat atttggggat agcgggagct
     5161 cgcgcgtagg gtggggctca gcgcagcgaa gcccacgcaa aaatgctgat cgtattgagg
     5221 tgggcgcggc gctttcgcgc ctttgcccac cctacggcgc ttgcctcaag tcaggcggca
     5281 acgctcggca ggccggcgag cgccatggcg aggtcggctt cgtcataggc ctgatcgacc
     5341 agcttgcctt cgaaatagtt gatgtaggcc gacatgtcga aatggccgtg gcccgacatg
     5401 ttgaacagga tcacctcggc cttgccctcc ttcttgcagc gcagcgcctc gtcgaccgca
     5461 cagcgcaccg cgtgcgccgc ctccggcgcc ggcacgatgc cctcgcagcg cgcaaactgc
     5521 acgccggcat cgaagcacgt tttctgatgg taggcgcgcg cctcgatcag cccgagcgcg
     5581 tggatgtgcg acaccatcgg cgccatgccg tgatagcgca gccccccagc atggaagccg
     5641 ggtgggatga aggtcgagcc gagggtgtgc atcttgacga gcggggtgag gtgcgcggtg
     5701 tcgccgaagt cgtaggcgta ttttccccgc gtcagcgacg ggcaggccgc cggctctacc
     5761 gcgatgatgc ggcgcttgcg cccgccacgc aactgcaggc ccaggaacgg gaaggcgagc
     5821 ccggcaaagt tcgagccgcc gccggtgcag ccgattacca cgtcggggtc gtcgcccgcc
     5881 atctcgaact gcttgatcgc ctcctgcccg ttgacggtct gatgcaggag cacgtggttc
     5941 agcaccgagc cgagcgagta tttcaccgcc gggtccttgg ccgccatctc caccgcctct
     6001 gaaatggcga tgccgagcga gcccggactg tcggggttct tggcgaggat tgcgcgcccg
     6061 gaatcggtct ccttcgacgg cgaggcgatg cagcgcgccc cataggtttc catcagcgcg
     6121 cggcgatagg gtttctggtc gtaggagacg cggacctgaa agacagtaac ctcgaggccg
     6181 aacagcgagc cggcaaacgc caaggccgag ccccactggc cggcgccggt ctcggtcgag
     6241 agccgcgtga cgccctgctc cttgttgtac caggcttgcg gtaccgcggt gttcggcttg
     6301 tgcgatcccg ccggcgagac gccttcgtac ttgaaataga tcttcgccgg cgtgtcgagc
     6361 gcccgctcga gacgacgcgc gcggatgagc ggcgacggcc gccacatgcg gtagacgtcg
     6421 cggatcggct cggggatgtc gatcgtgcgt tcggccgata cctcctggag gatcagggcc
     6481 atcgggaaca gcggctcgag atcggcgggg ccgaccggct gcttcgtgcc cggatgcaac
     6541 accggcggca gcggctgtgg cagatcggcc gcgaggttgt accaggtttt cgggatctgc
     6601 gtttcgtcga gaacgtattt gagctgatca ctcacgccac cctccacgct gaaagccagc
     6661 tattgccgca ggcaagcata tcccggatcg ggaggcggca aaatccgcta tcgcgaccac
     6721 ccggatcgtg aacgatcccg gctgtcgcat agccgcaggc cggccgcgag gctcagcgcg
     6781 ggctcgagat cgccagcggc tcgccgcgcg ccgcctgcgc gccgggaagg ccgtcgcggc
     6841 cgtagatgtc ctcgcggaac tggacgacgc cgtcggccgt ggcccagccg gtaacataga
     6901 cccaatgcag ag
//
LOCUS       DATMQB010000030         5649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1246950, whole genome shotgun sequence.
ACCESSION   DATMQB010000030 DATMQB010000000
VERSION     DATMQB010000030.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5649
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1246950"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..149
                     /locus_tag="VNY79_01070"
     CDS             <1..149
                     /locus_tag="VNY79_01070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HWX71067.1"
                     /translation="NAIAGLVNERGNVLGMMPHPENHVEAVLGCTDGRGLFAGLVDHF
                     RKAA"
     gene            181..930
                     /locus_tag="VNY79_01075"
     CDS             181..930
                     /locus_tag="VNY79_01075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HWX71068.1"
                     /translation="MQLGLILLLIEVALIVHAAKTGRFWPWGFIILFIPGFGALAYVL
                     IELLPEWFGSAQGQQARRRVVSTLDPGRRYRELTDQLQVADTIANRAALAEECLALGK
                     FEEALGHYEHILALPMGDDAIYALGKARAQFGHGNPQQAVATLDDLRERWPDYQSAEG
                     HLLYARALEESGRTEDALSEYQAVANYYPGAEARVRYGLLLAKAGRHAEAKTVLAEVL
                     AQLKRAPKYVRRAQAEWIALAESALRDQVRA"
     gene            1001..3202
                     /gene="purL"
                     /locus_tag="VNY79_01080"
     CDS             1001..3202
                     /gene="purL"
                     /locus_tag="VNY79_01080"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004642 -
                     phosphoribosylformylglycinamidine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HWX71069.1"
                     /translation="MTSTEPPITPELIAQHGLKPDEYARILKLIGRAPSFTELGIFSA
                     MWNEHCSYKSSKIHLRTLPTSAPWVIQGPGENAGVIDIGDGLAVVFKMESHNHPSYIE
                     PYQGAATGVGGILRDVFTMGARPIACLNALSFGDPRHPKTRHLVSGVVAGIGGYGNSF
                     GVPTVGGEVRFHRRYDGNCLVNAMAVGIAEKDKIFYAKATGVGMPIVYLGSKTGRDGI
                     HGATMASAEFGADAEEKRPTVQVGDPFAEKLLLEACLEIMAEGCVIAIQDMGAAGLTC
                     SAVEMGAKGDLGVALDLDKVPCRETGMSAYEMMLSESQERMLMVLKPEKEREAEAIFR
                     KWGLDFAIVGETTANRRFEVRHRGALMADLPIKELGDEAPLYDRPFQQGPRQAVIGAA
                     SIEPPMRLADALEKLIGAPDLCSRRWVFEQYDHVIIGNTMQRPGGDAAVVRINDGPKA
                     LALTADVTPRYCEADPFEGGKQAVAEAYRNLTAVGALPRAVTDNLNFGNPERPEIMGQ
                     LVGCIRGIGEACRALDFPVVSGNVSLYNETNGRAILPTPTIGGVGLLDDFARSMTLAF
                     KGEGDAILLVGETSGWLGQSLYLREICGSEEGAPPPVDLAAERRHGEFVRALIRDGLL
                     TAVHDVSDGGLLVALAEMAMASGIGAVLEAPPGVAGHAFWFGEDQGRYVVTAKNADAV
                     VQRASAAAVPVVRHGATGGKVLAVAGERPLPVKDLRARFEAWLPAYMAAPA"
     gene            3308..3544
                     /locus_tag="VNY79_01085"
     CDS             3308..3544
                     /locus_tag="VNY79_01085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family transcriptional regulator"
                     /protein_id="HWX71070.1"
                     /translation="MAMAANAIERLIRARVPDAQVTIRDLAGDGDHYAATVIAESFRG
                     KSRVQQHQIVYEALKTEMGGKLHALALQTGTPDR"
     gene            3776..4114
                     /gene="grxD"
                     /locus_tag="VNY79_01090"
     CDS             3776..4114
                     /gene="grxD"
                     /locus_tag="VNY79_01090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Grx4 family monothiol glutaredoxin"
                     /protein_id="HWX71071.1"
                     /translation="MSIEQFIDNELKGNDVVLFMKGTPQFPMCGFSGQTVQILDYLGV
                     AYKGLNVLENDELRQGIKAYSNWPTIPQLYVKGEFVGGCDIIREMFQAGELQSLLKDK
                     GVPVKESAPA"
     gene            complement(4186..4509)
                     /locus_tag="VNY79_01095"
     CDS             complement(4186..4509)
                     /locus_tag="VNY79_01095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015597849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HWX71072.1"
                     /translation="MATARDLRRIALSLEGTTEAPHFDRTAFKVSRIYATLAADGRTA
                     NLMFTPDEQALKCTVAPEAFSPVANAWGLRGATTAKLAALTVEELRDALALAWQQALP
                     KAKAR"
     gene            complement(4582..5199)
                     /gene="rpsD"
                     /locus_tag="VNY79_01100"
     CDS             complement(4582..5199)
                     /gene="rpsD"
                     /locus_tag="VNY79_01100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0015935 - small ribosomal subunit
                     [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0019843 - rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HWX71073.1"
                     /translation="MTKRHEAKYKIDRRMGQNIWGRPKSPINKREYGPGQHGQRRKGK
                     LSDYGVQLRAKQKLKGYYANMSERHFHGIYDEARRLKGDTGAHMIGLLERRLDTIVYR
                     AKFVPTVFAARQFVNHGHVKVNGRRVTVPSYRVKVGDMVEVKEKSKQLALVLEATALA
                     ERDVPDYVDVDHSKMTAKLNRVPLIGDVPYPVIMEPHLVVEYYSR"
     gene            complement(5442..>5649)
                     /locus_tag="VNY79_01105"
     CDS             complement(5442..>5649)
                     /locus_tag="VNY79_01105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="oxalate/formate MFS antiporter"
                     /protein_id="HWX71074.1"
                     /translation="KFAATNYGFLYIAQGVGSILGGPAAAFLKQSTGSWTAVFIVVAV
                     LDVITALLAITVLRAMRREHLAAG"
BASE COUNT          945 a         1858 c         1883 g          963 t
ORIGIN      
        1 tgaacgccat cgccggcctc gtcaacgaac gcggcaacgt gctcggcatg atgcctcacc
       61 cggagaacca cgtcgaagcg gtgctgggct gcaccgatgg gcgtgggctg tttgcgggat
      121 tggtggacca tttccggaag gcggcgtgag cgtttcgccg gtcgccgttc tggggctccc
      181 atgcagcttg gactgatcct gctcctgatc gaagtggcgt tgatcgtcca tgcggccaag
      241 accggccggt tctggccgtg gggtttcatc atccttttca ttccgggatt cggcgcgctc
      301 gcctatgtgc tcattgagct tctgcccgaa tggttcggca gcgcccaggg ccagcaggcg
      361 cgtcggcggg tggtcagcac ccttgatccg gggagacgct atcgcgagct cacagatcag
      421 cttcaggtcg ccgacaccat cgcgaaccgc gccgcgctcg ccgaggagtg cctggcgctg
      481 ggaaaattcg aagaggcgct agggcactat gaacacatcc tggcgctgcc gatgggcgat
      541 gacgcgatct acgcgctggg caaggcgcgc gcccagttcg gtcacggcaa tccgcagcag
      601 gcggtggcga cgctcgacga tttgcgcgaa cgctggccgg actaccagtc ggcggaaggg
      661 catctgcttt atgcccgtgc gctcgaagaa agcggccgca ccgaggacgc gctctccgag
      721 tatcaggccg ttgcgaacta ttaccccggc gccgaggcgc gcgtgcgcta cggcttgctg
      781 cttgccaagg cgggccgcca cgccgaggcg aagacggtcc ttgccgaggt cttggcccag
      841 ctcaagcggg cgcccaaata tgtcaggcgc gcgcaggccg aatggatcgc gcttgccgaa
      901 agcgcactac gcgatcaggt acgggcctga acaacacaat tgacgcggga acgtgaggat
      961 ggcttcggtt acctcgaagg taacaaggcg gcgctgacgc atgacttcca cagagcctcc
     1021 gatcaccccc gagctgattg cccagcacgg cctcaagccc gacgagtacg cgcgcatcct
     1081 caagctgatc ggccgcgcgc cgagcttcac cgaactcggc atcttctcgg cgatgtggaa
     1141 cgagcactgc tcgtacaaat cctcgaaaat ccatctgcgc acgctgccga ccagtgcgcc
     1201 ctgggtgatc caggggccgg gcgaaaatgc cggtgtcatc gacatcggcg acgggcttgc
     1261 cgtcgtgttc aagatggaga gccacaacca cccgagctac atcgagccct atcagggcgc
     1321 ggcgaccggc gtcggcggca tcctgcgcga cgtcttcacc atgggcgccc gcccgatcgc
     1381 ctgcctcaac gcgctgtcct tcggcgaccc gcgccatccg aaaacgcggc acctggtatc
     1441 gggcgtcgtc gccgggatcg gcggctacgg caattccttc ggcgtgccca cggtcggcgg
     1501 cgaagtgcgt ttccaccgcc gttacgacgg caattgcctg gtcaacgcca tggcggtcgg
     1561 catcgccgag aaggacaaga ttttctacgc caaggccacc ggcgtcggca tgccgatcgt
     1621 ctatctcggc tcgaagaccg gccgcgacgg catccacggc gccaccatgg catcggccga
     1681 gttcggcgcc gatgcggagg agaagcgccc gactgtgcag gtcggcgatc cgttcgcgga
     1741 gaagcttttg ctcgaggcct gcctcgaaat catggccgag ggctgcgtca tcgccatcca
     1801 ggacatgggc gcggcgggcc tgacctgctc ggcggtcgag atgggcgcca agggcgatct
     1861 cggcgtcgcg ctcgacctcg acaaggtgcc ctgccgtgag accgggatga gcgcctacga
     1921 gatgatgctg tcggaaagcc aggagcgcat gctcatggtg ctcaagcccg agaaggagag
     1981 ggaggccgag gcgatcttcc gcaaatgggg tctcgatttc gcgatcgtcg gcgagaccac
     2041 ggcgaaccgg cgtttcgagg tcaggcaccg cggcgcgctc atggcggacc tgccgatcaa
     2101 ggaactcggc gacgaggcgc cgctctatga ccggccgttc cagcaaggcc cgcggcaggc
     2161 ggtgatcggc gcagcttcga tcgagccgcc gatgcgcctt gccgacgctc tggaaaagct
     2221 catcggcgct ccggacctgt gctcgcggcg ctgggtcttc gagcagtacg atcacgtcat
     2281 catcggcaac acgatgcagc ggccgggcgg ggatgcggcc gtggtgcgga tcaacgacgg
     2341 ccccaaggcg ctggcgctga ccgccgacgt gacgccgcgc tattgcgagg ccgatccgtt
     2401 cgaaggcggc aagcaggcgg tggccgaagc ctatcgcaac ctcaccgccg tcggcgcgct
     2461 gccccgcgcc gtgaccgaca acctcaactt cggcaatccc gagcggcccg agatcatggg
     2521 ccagctcgtc ggctgcatcc gcggcatcgg cgaagcctgc cgcgcgctcg attttccggt
     2581 cgtttccggc aatgtctcgc tctacaacga gaccaacggc cgcgcgatcc tgccgactcc
     2641 gacgatcggc ggcgtcggtc tgctcgatga tttcgcgcgc tcgatgacgc tcgccttcaa
     2701 gggcgagggc gacgccatcc tgctcgtcgg cgaaacctca ggctggctcg gccaatcgct
     2761 ttacctgcgc gagatctgcg gaagcgagga gggggctccg ccgccggtcg accttgccgc
     2821 cgagcgccgg cacggcgaat tcgtgcgcgc cctcatccgt gacggcttgc tgaccgcggt
     2881 gcacgatgtc tccgacggcg gccttctggt ggcgctcgcc gagatggcga tggcttccgg
     2941 catcggcgcc gtgctcgagg cgccgccggg cgtcgccggt cacgccttct ggttcggcga
     3001 ggaccagggc cgctatgtcg tcaccgcgaa gaatgccgac gccgttgtgc agcgggcgag
     3061 cgccgccgct gtgccggtgg tccggcatgg cgcgaccggc ggcaaagtcc ttgccgtcgc
     3121 cggcgaacgg ccgctcccgg tcaaggacct ccgcgcgcgt ttcgaggctt ggctgcccgc
     3181 ctatatggcg gctccggcct gagccgaagc ggcgcattga cgctcgggcg cagccgccgc
     3241 attgtggtcg cgacgctgcg caagcttggg cacggggtgg ccgcaggcgg aacaggtgag
     3301 gcgcgccatg gccatggctg cgaacgctat cgagcggctg atccgagccc gcgtccctga
     3361 cgcgcaggtg acgatccgcg atcttgccgg cgacggcgac cactacgccg caacggtcat
     3421 cgccgaatcc ttccgcggca agtcgcgcgt gcagcagcac cagatcgtct acgaggcgct
     3481 caagaccgag atgggcggca agctccacgc gcttgccctg cagaccggca cgcccgaccg
     3541 ctgaggcggc cggaggactc tttaaggcat tctctttcca gcgccgcccc ggtggaattc
     3601 catgctctgc gccggaacgg cggtggccaa acactgctgg gttttcaagg gattgcaggc
     3661 atgaaatctg cgcataggct ttgcgccggc tttgcgctac atatattgcg tttccggcgg
     3721 gactcagtcg acgcggacga ggaagcgatc cgcgacgcaa acaaggaaga gcgcgatgtc
     3781 catcgagcaa ttcatcgaca acgaactaaa gggaaacgac gtcgttctgt tcatgaaggg
     3841 cacgccgcaa ttcccgatgt gcggcttctc cggccagacc gtgcagatcc tcgattacct
     3901 cggcgtggcc tataaggggc tcaacgtcct cgagaacgac gagctgcggc agggcatcaa
     3961 ggcctattcc aactggccca ccatcccgca gctctacgtc aagggcgagt tcgtcggcgg
     4021 ctgcgacatc atccgtgaaa tgttccaggc cggcgaactg caatcgctgc tcaaggacaa
     4081 gggcgttccg gtgaaggaga gcgcgccggc ttagcgcgct cctgcccgtt cgcgcactac
     4141 gccggaaaca ggcaaacgcc tcgtcggctc cgtcggattt cttcgtcagc gcgcttttgc
     4201 tttcggcagc gcctgctgcc atgcaagcgc cagggcgtcg cgcagttcct cgaccgtcag
     4261 cgcagcaagc ttcgcggtgg tcgcgccgcg gaggccccag gcgttggcga ccggcgagaa
     4321 cgcctccggc gcgaccgtgc acttgagggc ctgttcgtcg ggcgtgaaca tcagatttgc
     4381 agtgcggccg tccgcggcaa gcgtcgcgta aatcctgctc accttgaaag cggtgcgatc
     4441 gaaatgcggc gcttcggtcg taccctcgag cgagagcgcg atgcggcgaa ggtcccgtgc
     4501 ggtcgccatg acgcatccag gcgtgagcga ttctgccgtc ccttcgcgct cgcctattgc
     4561 agtgtcgccg ctcggcgaga gtcagcgcga gtaatattcg accacgaggt gcggttccat
     4621 gatcaccgga tacggcacgt cgccaatgag cggcacccgg ttgagcttcg ccgtcatctt
     4681 ggagtggtcg acgtcgacgt aatccggcac gtcgcgctcg gcgagtgcgg tcgcctccag
     4741 taccagggcg agttgcttcg acttctcctt gacctcgacc atgtcgccga ccttgacgcg
     4801 gtaactcggc acggtcaccc gccggccgtt gaccttgacg tggccgtggt tgacgaactg
     4861 gcgcgcggca aagacggtgg gcacgaactt cgcccggtag acgatggtgt cgagccgccg
     4921 ctcgagcagg ccgatcatgt gggcgccggt atcgcccttg agccgccgcg cctcgtcgta
     4981 gatgccgtgg aagtggcgct ccgacatgtt ggcgtaatag cccttgagct tctgcttggc
     5041 gcgcaattgt acgccgtagt cggagagctt gcccttgcgc cgctggccgt gctggccggg
     5101 accgtattcg cgcttgttga tcgggctctt cgggcgaccc cagatattct gtcccatccg
     5161 acggtcgatc ttgtacttcg cctcatggcg cttggtcatt cgcgtcctcg ctctgaaagt
     5221 tttggctgag gatcgcgccc tcctctatcc agaccccgct cctccgatcc gctgttggcc
     5281 ggagggggag ggcggaccga caggtcgacc gccgaagcgc cggcgtcaac cacgggtcgc
     5341 gaaacaccac gcgggcccgt tcgggcccgc gcagcgccac gtatctaggg cgaaaactgc
     5401 gcagtgtcaa accggcggtg aggcggcggc caaggggtcg ttcagcccgc cgccaagtgc
     5461 tcgcgccgca tggcgcgcag cacggtgatg gccagcaggg cggtgatgac atccaggacc
     5521 gcgacgacga tgaacaccgc ggtccagctt ccggtcgact gcttgaggaa ggccgccgcc
     5581 gggccgccca ggatcgagcc gacaccttgc gcgatgtaga ggaagccgta attggtcgcc
     5641 gcgaatttt
//
LOCUS       DATMQB010000031         5315 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3728467, whole genome shotgun sequence.
ACCESSION   DATMQB010000031 DATMQB010000000
VERSION     DATMQB010000031.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5315)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5315)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5315
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3728467"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1761
                     /locus_tag="VNY79_01110"
     CDS             <1..1761
                     /locus_tag="VNY79_01110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008142526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HWX71075.1"
                     /translation="GISWVAFGWPNGDFFAAHKLGDLGLEMMEIAPVDGVVKRRVDTY
                     QVVVGDIQFEKRGFEGTDFVVTDQEWYKKGIASDEPSWFEVTAHPVGLRPSIAFVGPI
                     DVYQKRQGVLAVIIENTRLAQFLSQLSVGKTGAAFILGRGGSTVAAPDPDADETNMQR
                     SDQPLLPVAQGAFKAAGSADESDKKTARHVRFVAGAEAYAVTLTPLAFPGWTLATVIP
                     EAEFLGPIETTIRRLLVGLAILILAAGALSAWLARRIIAAPLIAVTDELKHVERFELD
                     QVRRRPSRIAELENLSNAIADMAGGLAAFRKYIPADLVKTLLSKGVEPRPGGTIRTVT
                     ILFADIAGFTGLSERLGDQIVPLLSGYLDLMSREVSGHAGTIDKFIGDAVMAFWGAPA
                     ANADHAVDACRAALASQQALRQSGLSDDAGRPLKVRIGINSGAVLVGNIGSEFRLNYT
                     VIGDAVNVASRLEGANKEYGTDIIIGEETRRLAGDRIEVRELDRLTVYGREGGLAIYE
                     LLGIAEGAANPPGWAALYERGLAAYRARDFAGAANLFQQVLAARAADEPARILLARCR
                     EFLHSPPGKDWEAANAMKVK"
     gene            1958..2254
                     /locus_tag="VNY79_01115"
     CDS             1958..2254
                     /locus_tag="VNY79_01115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2282 domain-containing protein"
                     /protein_id="HWX71076.1"
                     /translation="MNPKSNIANATIAGSFVAALAMIAAPAFAAPKPPQATMDKCFGI
                     ALKGENDCAAGAGTTCAGTSSADYQGNAWKYVPKGTCANIKTPNGTGSLEPTKS"
     gene            2322..3182
                     /locus_tag="VNY79_01120"
     CDS             2322..3182
                     /locus_tag="VNY79_01120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF692 domain-containing protein"
                     /protein_id="HWX71077.1"
                     /translation="MSITSRLPARAGVGFKPAHFRDILATLQPLGFFEVHAENYMGAG
                     GPPHAQLGALRERYALSIHGVGLSIGSTAPLDREHLARLKILCARYEPESFSEHLAWS
                     SHGGVYFNDLLPLPYMPETLARVAEHIDAVQTALGRMMLLENPSTYVRLAESAIPEVD
                     FLAELARRTGCGLLLDVNNVFVSAKNNGTDPRSYLDAFPLDRVKEIHLGGHDRETDDA
                     DGALLIDAHGSPVADEVWALYADVIAHTGPIATLLEWDNDIPDWPTLLAQAVAADDIL
                     ARAARASAAA"
     gene            3191..3970
                     /locus_tag="VNY79_01125"
     CDS             3191..3970
                     /locus_tag="VNY79_01125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020180557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding domain-containing protein"
                     /protein_id="HWX71078.1"
                     /translation="MAAAFEASFARALLDAAAPIPDAVAAADAPTATRRFAVHRNNVV
                     AGLANTLRSRFPATEKIVGKEFFAAMARAFVTEKPPRTPLLAGYGDEFPSFIAGFAPA
                     RELPYLADVAELEAARTRAYHAEDAVQVDAGAFAALDPGAAGGLRIALHPSTEIIRSP
                     HPIVTIWAMNSGEQPLAAIEDWRGEDALVIRPHLDVEVRLLLRGGAAFLLALATGRTL
                     ADAAETARADHSEFDLAGNLAGLIGWGVAGKVILPAPRETD"
     gene            4034..4579
                     /locus_tag="VNY79_01130"
     CDS             4034..4579
                     /locus_tag="VNY79_01130"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DOMON-like domain-containing protein"
                     /protein_id="HWX71079.1"
                     /translation="MRLALRLHPNSLSFAATQLEVEVSRPRNSTLLLSYAVTGRMRDL
                     QLPPVVATTRADELWRHTCFEAFLRTLPGAAYYEFNFAPSTQWAAYRFSSYRSRIRAA
                     SALRTPLIEVQSSPDRFALEAALERDELSNLPPNAILRLGLAAVIEETSGHKSYWALA
                     HPPGKPDFHHSDGFAYQLPPV"
     gene            4710..>5315
                     /locus_tag="VNY79_01135"
     CDS             4710..>5315
                     /locus_tag="VNY79_01135"
                     /inference="COORDINATES: protein motif:HMM:NF018743.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1343 domain-containing protein"
                     /protein_id="HWX71080.1"
                     /translation="MMKFGIDRLIGEPALRAPLAGRRVALLAHPASVTADLTHSLDAL
                     AACGDIKLAAAFGPQHGLRGDKQDNMIESPDFHDPVHGIPVFSLYGEVRKPTDAMMGA
                     FDVIFVDLQDLGCRIYTFVTTLRYVLEAAAQRRKAVWVLDRPNPVGRPVEGLALREGW
                     ESFVGAGPLPMRHGLTLGELGSWFVKKLKLDVEYRVIEMQGW"
BASE COUNT          847 a         1843 c         1725 g          900 t
ORIGIN      
        1 ggcatctcct gggtggcgtt cggctggccg aacggcgact tcttcgccgc gcacaagctc
       61 ggcgatctgg gcctggagat gatggagatc gcgccggtcg acggcgtggt gaagcggcgc
      121 gtcgacacct accaggtggt cgtcggcgac atccagttcg agaagcgcgg cttcgaaggc
      181 acggatttcg tcgtcaccga tcaggaatgg tacaagaaag gcatcgcgag cgacgagccg
      241 agctggttcg aggtcaccgc gcaccctgtc ggcctgcgtc cttcgatcgc ctttgtcggc
      301 cctatcgatg tctaccagaa acgccagggc gtccttgccg tcatcatcga aaacacgcgg
      361 ctcgcgcagt ttttgtcgca gctttcggtc ggcaagaccg gcgctgcgtt catcctcggc
      421 cgcggcggaa gcacggtcgc cgcgcccgat cccgacgccg acgagaccaa catgcagcgc
      481 tcggatcagc cgctgctgcc ggtcgcgcag ggcgccttca aggcggccgg cagcgccgac
      541 gaaagcgaca agaagaccgc tcgccacgtg aggttcgtcg ccggcgccga ggcctatgcg
      601 gtcaccctga ccccgctggc ctttcccggc tggacgctcg ccaccgtcat tccggaggcg
      661 gagtttctcg gcccgatcga aacgacgata cggcgtctgc tcgtcgggct cgcgattctt
      721 atcctcgcgg ctggcgcgct ttccgcgtgg ctggcgcgac ggattatcgc cgcaccgctg
      781 atcgcagtga ccgacgagct caagcacgtc gagcgcttcg agctcgatca ggtgcggcgc
      841 cggccctcgc gcatcgccga gctggaaaac ctgtcgaacg ccatcgccga tatggcgggc
      901 gggctggcgg cgtttcgcaa atacatcccc gcggacctgg tgaagacgct gctgagcaag
      961 ggcgtcgagc cgcgccccgg cggcacaatc cgcaccgtaa cgatcctgtt cgcggatatc
     1021 gccggcttca ccgggctctc cgaacggctc ggcgaccaga tcgtgccgct gctgtcgggc
     1081 tatctcgatc tgatgtcgcg cgaggtgagc ggccacgccg gcaccatcga caaattcatc
     1141 ggcgacgcgg tgatggcgtt ctggggcgcg ccggcggcaa acgccgatca cgccgtcgat
     1201 gcctgccgcg ccgcgctcgc ctcacagcag gcgctgcgcc aatcgggact gtccgacgac
     1261 gccggccggc cgctcaaggt gcgcatcggc atcaattccg gcgcggtgct ggtcggcaat
     1321 atcggctcgg agttccgcct caactacacc gtgatcggcg acgccgtgaa cgtggcgagc
     1381 cgcctcgaag gcgccaacaa ggaatacggc accgacatca tcatcggcga ggaaacgcgc
     1441 cgcctcgccg gcgaccgcat cgaggtacgc gagctcgacc ggctcacggt ctacgggcgc
     1501 gagggcggat tggcgatcta cgaactgctc ggtatcgccg aaggcgcggc caacccgccg
     1561 ggctgggctg cgctctacga gcgcggcctc gctgcctacc gcgcgcgcga cttcgccggg
     1621 gcggcgaatt tgttccagca ggtcctggcc gcgcgggcgg cggatgagcc cgcgcgcatc
     1681 ctgctcgccc gctgccgcga gtttctccac tcgcctcccg gaaaagactg ggaagcggcg
     1741 aacgcgatga aggtgaaata gtcacggcgt gttgattggg gtgagccatc cgtcaccggc
     1801 acgtgattcg gctccgctgt gctttcaacc cgatttgccg agaaaggctt taaccaattg
     1861 tgctatgcag gccgcctgca gccggatgtt ccggcccgcc gcggccgctt cggcgcttgg
     1921 gcgccctgcc cgctcagggt ttggaaagga tcgcctcatg aacccgaaaa gcaacattgc
     1981 caatgccact atcgccggct ccttcgtcgc cgccctcgcc atgatcgcgg cgccggcatt
     2041 cgccgccccg aaaccaccgc aggccacgat ggacaagtgc ttcggcatcg ccctgaaggg
     2101 tgagaacgac tgcgccgcgg gcgcgggcac cacctgcgcc ggcacttcga gcgccgatta
     2161 ccagggcaat gcctggaagt acgtcccgaa gggaacgtgc gcgaacataa agactccgaa
     2221 cggcacgggc tcgctggagc cgaccaagtc ctgactggcc agcgcggcgc acgcgccgta
     2281 cgcggcacta ccgttcactc cctggcgaat aggggagccg catgtcgatc acgtcccgtc
     2341 tcccggcgcg cgccggcgtc ggtttcaagc cggcgcattt tcgcgacatc ctcgcaacgc
     2401 tgcagccgct cggcttcttc gaggtgcacg ctgaaaatta tatgggcgcc ggcgggccgc
     2461 cgcatgcgca gctcggcgcg ttgcgcgaac gctatgcgct gtcgattcac ggcgtcggcc
     2521 tgtcgatcgg ctcgaccgcg ccactcgatc gcgagcatct cgcgcggctc aagatcctct
     2581 gcgcgcggta cgagccggag agcttctccg agcatctcgc ctggtcgtcg cacggcggcg
     2641 tctatttcaa cgatcttctg ccgctgccat atatgcccga gactttggcg cgggtcgccg
     2701 agcacatcga cgcggtgcag acggcgctcg gccgcatgat gctgctggaa aatccgtcca
     2761 cctatgtgcg gctcgccgaa agcgcgatcc ccgaggtcga cttcctcgcc gagctcgcgc
     2821 ggcggaccgg ctgcggattg ttgctcgacg tcaacaacgt gttcgtctcg gccaagaaca
     2881 acggcaccga tcctcggtcc tatctggacg cgttccctct cgaccgggtg aaggaaatcc
     2941 atctcggcgg ccatgaccgc gaaaccgacg atgccgacgg cgcgcttctc atcgacgcgc
     3001 acggatcgcc ggtcgctgac gaggtctggg cgctctacgc cgatgtcatc gcccataccg
     3061 ggccgatcgc gactctcctc gagtgggaca acgacattcc cgactggccg acgctcctcg
     3121 cgcaggcggt cgcggcggac gatattcttg cgcgcgccgc gcgcgcgtcg gcggcggcgt
     3181 aggaccggcc gtggcggcgg cgttcgaagc ctcgttcgcc cgcgcgctgc tcgacgccgc
     3241 ggcgcccatt cccgatgccg tcgccgcggc ggatgcgcca acggcaacgc ggcgctttgc
     3301 cgtccaccgc aacaacgtcg tggccggcct ggcgaacacg ctcaggagcc gctttcccgc
     3361 gaccgagaag atcgtcggca aagagttttt cgcggcgatg gcacgcgcct tcgtgacaga
     3421 gaagccgccg cgcacgccgc tgctggcggg ctacggcgac gaatttcctt ccttcattgc
     3481 cggtttcgcg ccggcccgcg agcttcccta tcttgccgat gtcgcagaac tcgaggcggc
     3541 gcgcacgcgt gcctatcacg ctgaagacgc cgtgcaggtc gacgcgggtg ccttcgcggc
     3601 gctcgaccct ggcgccgccg gcgggctccg catcgcgctg cacccttcca ccgaaatcat
     3661 ccgctcgccc catcccatcg tcaccatctg ggcgatgaat tcaggcgaac aaccgctcgc
     3721 cgcgatcgag gactggcgcg gcgaggatgc gctggtcatc cgcccgcatc tcgatgtcga
     3781 ggtgcgcttg ctgctgcgcg gcggcgccgc gttcctgctc gcgctcgcca ccgggcggac
     3841 gctcgccgac gcggccgaga ccgcacgcgc cgatcattca gagttcgacc tcgccgggaa
     3901 tttggccgga cttatcggct ggggcgtcgc cggcaaggtg atcctgccag cgccgcggga
     3961 aacggactag ccgcgctgtt gttcgcccag ggcgtgcctg tgacaagccg acacctgccg
     4021 ttacaatgcc cgcatgcgcc tggccttgcg gctccatccg aactcgcttt ccttcgcggc
     4081 gacccagctg gaagtggaag tctcgcgccc gcgcaacagc accctgctgt tgtcctacgc
     4141 cgtgaccggc aggatgcgtg acctgcagct gccgccggtc gtggcgacga cgcgggccga
     4201 cgagctgtgg cggcacacct gcttcgaggc cttcctgcgc acgctgccgg gcgccgcgta
     4261 ctacgaattc aactttgcgc cgtcgacgca atgggcggcc tatcgcttca gcagctaccg
     4321 cagccggata cgcgcggcga gcgcgctgcg cacacctctg atcgaggtgc aatcgagccc
     4381 cgaccgcttc gcattggagg ccgcgctgga gcgcgacgag ctgtcgaacc tgccgcccaa
     4441 tgccatcttg cgcctcggcc tcgcggcggt gatcgaggag acgagcgggc acaaatccta
     4501 ctgggcgctg gcgcatccgc cgggcaagcc ggacttccat cattccgatg gcttcgccta
     4561 tcaacttccc ccggtctagc acgatgcctg cgcggcctga tgcacaagcg cgggacacgc
     4621 gtcccctccc caccctcccc cacaaagggg gagggagcac agaaagcttg gtccgctgaa
     4681 ttcgtgtcgc tgaactctgg cttggctaga tgatgaaatt cggcatcgat cggttgattg
     4741 gcgaacccgc gctgcgcgcg ccgctcgctg gccggcgcgt tgctctgctg gcgcatccgg
     4801 cttcggtgac agcagacctg acgcattcgc tcgatgccct tgccgcctgc ggcgacatca
     4861 agcttgccgc cgccttcggt ccgcagcacg ggctacgcgg cgacaagcag gacaacatga
     4921 tcgagtcgcc cgactttcac gatccggtgc acggcatccc ggtcttcagc ttgtacggcg
     4981 aagtgcgcaa gccgactgat gcaatgatgg gcgccttcga cgtcatcttt gtcgatctgc
     5041 aggatctcgg ttgccgcatc tatacgttcg tcacgacgct gcgttacgtg ctcgaagcgg
     5101 cggcacaacg tcggaaagcg gtgtgggtgc tggaccggcc caatccggtc ggccggccgg
     5161 tcgaagggct ggcgctgcgc gaaggctggg agagctttgt cggcgccggg ccgctgccga
     5221 tgcgccatgg gctcaccctc ggcgagctgg gttcgtggtt cgtcaaaaaa ctcaagctcg
     5281 atgtggagta ccgcgtcatc gagatgcagg gctgg
//
LOCUS       DATMQB010000032         5533 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_8215, whole genome shotgun sequence.
ACCESSION   DATMQB010000032 DATMQB010000000
VERSION     DATMQB010000032.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5533)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5533)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5533
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_8215"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..174)
                     /locus_tag="VNY79_01140"
     CDS             complement(<1..174)
                     /locus_tag="VNY79_01140"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455763.1"
                     /note="catalyzes the formation of L-tryptophan from
                     L-serine and 1-(indol-3-yl)glycerol 3-phosphate; Derived
                     by automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HWX71081.1"
                     /translation="MSVQRPNSFRTGPDEHGHFGIYGGRFVAETLMPLILDLENAYAE
                     AKADPAFQKEMDGY"
     gene            complement(351..1025)
                     /locus_tag="VNY79_01145"
     CDS             complement(351..1025)
                     /locus_tag="VNY79_01145"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004640 - phosphoribosylanthranilate
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HWX71082.1"
                     /translation="MSFIVKICGLSTPEALEAALDAGADMVGFVFFPPSPRHLAFDTA
                     TALSRRVRARAQKIALTVDADDGLLSAIVAALRPDMLQLHGQEPPARMAAIRENLGLP
                     VMKAIAVAARGDLGAVPAYAAVADRLLFDGRAPREATRPGGLGKTFDWRLLENLDPGV
                     PFMLSGGLDAGNVGEALRITRAPAVDVSSGVERAPGEKDPDKIRAFIRVAREAAEHFC
                     KVPDSV"
     gene            complement(1096..1467)
                     /locus_tag="VNY79_01150"
     CDS             complement(1096..1467)
                     /locus_tag="VNY79_01150"
                     /inference="COORDINATES: protein motif:HMM:NF018058.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapA family protein"
                     /protein_id="HWX71083.1"
                     /translation="MARKIVTAIIVIPLAVVIIAFAIANRQIVTVSFDPFSVTEPAAV
                     VALPLFALIILLLIIGVLFGGAAAWLRQSRWRSTARRLEREVVDLRAKVDALGGPAGE
                     PTMVHNAGSPPQRLKLRPPVP"
     gene            complement(1638..1928)
                     /gene="ihfB"
                     /locus_tag="VNY79_01155"
     CDS             complement(1638..1928)
                     /gene="ihfB"
                     /locus_tag="VNY79_01155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008539997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006417 - regulation of translation
                     [Evidence IEA];
                     GO_process: GO:0075713 - establishment of integrated
                     proviral latency [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit beta"
                     /protein_id="HWX71084.1"
                     /translation="MIKSELVQRISEQNPHLYQRDVENIVNAILGEIIAAMARGDRVE
                     LRGFGAFSVKQRPARTGRNPRTGAHVAVDQKSVPFFKTGKEMRERLNRGAEA"
     gene            complement(2016..2996)
                     /gene="sppA"
                     /locus_tag="VNY79_01160"
     CDS             complement(2016..2996)
                     /gene="sppA"
                     /locus_tag="VNY79_01160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HWX71085.1"
                     /translation="MSLDADLIVDRRRMRRKLTFWRVVAIVVIVLAIAGSAELWSRRA
                     GFADAGAYIARVTIRGLIRDDDERVQQLERLAQSSTARAVVVHVDSPGGTTAGSEQLY
                     DALMRLKEKKPLVIVVESMAASGAYITALAGDHIVAKQTSLVGSIGVLFQYPNVSDLL
                     DKVGVKVETIKSSPLKAVPNGFEPTSPEARAAVESIIMDSYAWFRGLVQERRHLDGEA
                     LGRVADGRVFTGHQGIDLKLVDEIGDERTAIAWLAKEKNIDAKLPVRDYKLHSRFGDL
                     PFLHAAAVALLDAFGLTTVARSIDELGAVQAIERLNLDGLLALWHPANAN"
     gene            complement(3140..4876)
                     /gene="rpsA"
                     /locus_tag="VNY79_01165"
     CDS             complement(3140..4876)
                     /gene="rpsA"
                     /locus_tag="VNY79_01165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HWX71086.1"
                     /translation="MAQVATAAPSREDFASMIDESFSDGHLQEGSVVKGTVVGIEKDV
                     AVIDVGLKTEGRVALREFAGAGRAAEIKVGDIVEVYLERVENALGEAVLSRDKARREE
                     SWGKLEKAFQNNEKVQGVIFNQVKGGFTVDLDGAVAFLPRSQVDIRPIRDVSPLMNNQ
                     QPFQILKMDRRRGNIVVSRRTVLEETRAEQRQELVQNLEEGQVIDGVVKNITDYGAFV
                     DLGGIDGLLHVTDIAWRRVNHPSEVLNIGQQVKVKIIKINHETHRISLGMKQLLDDPW
                     QGIEAKYPVGARFKGRVTNITDYGAFVELEPGIEGLIHVSEMSWTKKNVHPGKIVSTS
                     QEVEVQVLEVDPVKRRISLGLKQTMRNPWEVFVEKYPAGSVVEGEVKNKTEFGLFLGL
                     DGDVDGMVHLSDLDWKRPGEQVIEEYKKGDKVKAQVLDVDVEKERISLGIKQLADDGV
                     AAEPAAAGELKKGAVVTCEVTEVKEGGIDVKIVGTDLSTFIKRSELARDRSEQRPDRF
                     AVGQKVDARVIQFDRRAHKASVSIKALEVAEEKEAIAQYGSSDSGATLGDILGTALKR
                     KGEEDEKGDTKE"
     gene            complement(5035..>5533)
                     /locus_tag="VNY79_01170"
     CDS             complement(5035..>5533)
                     /locus_tag="VNY79_01170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004127 - cytidylate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HWX71087.1"
                     /translation="SPDDAPRAIDAAIALDPTQFDAIALKAQVITEAASVVAAIPEVR
                     QALMNYQREFAVRRPGAVLDGRDIGTVIAPGADVKLFVVATPEVRAARRVLELRGRGE
                     QADEGEVLAELLRRDERDSRRSAAPLKAAPDAHLLDTTHLGIDAAFRAAVDIIEAVRT
                     GRKRS"
BASE COUNT          915 a         1858 c         1800 g          960 t
ORIGIN      
        1 gtagccgtcc atctccttct ggaatgccgg atcggccttc gcctccgcat aggcgttttc
       61 gagatcgagg atgagcggca tcaacgtctc ggcgacgaag cggccgccat agatgccgaa
      121 atggccgtgc tcatccggcc cagtgcggaa ggagttgggg cgctgcacgc tcatcctacg
      181 cgaaactccg cttcgatacc gtcatcctga ggcgcgcgcc aaaggcgcgc ctcgaaggat
      241 acggccgagg cgcccgggcc atcgcccttc gcggcgcgcg gagtttatca tcgggccggc
      301 cacttcgggc cggacccgtt ggctcgcacc tcggggtgac ggacctttgg tcaaacactg
      361 tcaggtacct tacagaagtg ctccgcggct tcccgcgcga cgcggatgaa cgcgcggatt
      421 ttatcgggat ccttctctcc cggcgcgcgc tcgacgccgg aggagacatc gacggcaggc
      481 gcgcgcgtga tgcgcaaggc ctcaccgaca ttgccggcat cgaggccgcc tgagagcatg
      541 aacggaacgc ccggatcgag gttttcgagg agccgccagt cgaaggtctt gccgaggccg
      601 ccgggccgcg tcgcttcccg cggggcgcgc ccgtcgaaca ggagccggtc ggcgaccgcc
      661 gcgtaagcgg ggacggcgcc gagatcgccc ctcgccgcaa cggcgatcgc cttcatgacc
      721 ggcaagccaa gattctctct gatcgcggcc atgcgcgccg gcggctcctg gccgtgaagc
      781 tggagcatat cgggccgcag cgccgcaacg atggcgctca gcaaaccgtc gtcggcgtcg
      841 acggtgaggg ctattttctg cgcgcgagcg cgcacgcgcc ggctgagggc ggtggccgta
      901 tcgaacgcaa ggtgccgcgg cgacggcggg aagaacacga atccgaccat gtcggcgccg
      961 gcgtccagtg ctgcttcgag cgcctccggg gtcgagagac cgcaaatctt cacgatgaac
     1021 gacatcaggc tattcctggc cgccgccctt ctacaaccgc ctgctcgctt tgtcttgcgg
     1081 cggcgcgcca agcgatcacg ggaccggcgg cctcagcttg agccgctgcg gcggactgcc
     1141 ggcgttgtgg accatggtcg gctcgcccgc cggacctccc agcgcatcga cctttgcgcg
     1201 cagatcgacc acctcgcgct ccaggcgcct tgcggtcgag cgccaccggc tctgccgcag
     1261 ccatgccgcg gccccgccga acagcacgcc gataatgagc aacagaatga tcagggcgaa
     1321 tagcggcagc gcgaccacgg ccgcaggctc ggtcacgctg aacggatcga acgagacggt
     1381 gacgatctgc cggttcgcaa tcgcaaaggc gatgatgacc acggcgagtg gaatgacgat
     1441 gatcgcggtg acgatcttgc gggccaattt cgcgactccg gtcggcacat cccttcccgc
     1501 gtgagcgggg acgggcaccg cccctcaggg cggcggcgcg gcgtcaaccg ctgggctcgg
     1561 cgctgagcgc tctcggccgc gcgccgcgcg gccccgctca ccgcgttggc gcgcgccccg
     1621 cgcgagcgga tgaaggctca agcctcggct ccgcggttga ggcgctcgcg catctctttg
     1681 ccggtcttga agaagggtac gctcttctga tcgacggcga catgtgcgcc ggtgcgcgga
     1741 ttgcggccgg tgcgcgccgg acgctgcttg accgagaagg cgccgaaacc gcgcagttcc
     1801 acgcggtcgc cgcgcgccat cgcggcaatg atctcgccga gaatggcgtt gacgatgttc
     1861 tcgacgtcgc gctggtaaag atgcgggttc tgctcggaaa tgcgttgaac gagttcagat
     1921 ttgatcatgg gtcgcgcctt gagtcgcccc caataaacgg ccccggttgc gacgcgacgg
     1981 agccgaacgc ctaagcaacc gcagcgctcc gccgcttaat tcgcgttcgc agggtgccaa
     2041 agcgccagca gaccgtcaag attgagccgc tcgatcgcct gcaccgcacc caattcgtcg
     2101 atgctgcggg ccaccgtggt gaggccgaaa gcgtcgagca gtgcaacggc ggcggcatgc
     2161 aggaacggca ggtcaccgaa gcggctgtgc agcttgtagt cccgcaccgg cagcttggcg
     2221 tcgatgttct tctccttcgc gagccaggcg atggcggtcc tctcgtcgcc gatttcatcg
     2281 accagcttga ggtcgatgcc ctggtgcccg gtgaacacgc ggccgtcggc gacgcggccg
     2341 agcgcctcgc cgtcaagatg ccggcgctcc tgcaccagac cgcggaacca ggcataggaa
     2401 tccatgatga tcgactcgac cgccgcgcgc gcttccggcg aagtcggctc gaagccgttc
     2461 ggcaccgcct tgagcggaga ggatttgatc gtctcgacct tgacgccgac cttgtcgagc
     2521 agatcggaga cgttgggata ctggaacagc acgccgatcg agccgaccag cgaggtctgc
     2581 ttggcgacga tgtgatcgcc ggccagcgcc gtgatgtagg cgcccgatgc cgccatgctc
     2641 tcgaccacaa tgacgagcgg ctttttttcc ttgagacgca tcagcgcgtc gtagagttgc
     2701 tcggaaccgg cggtcgtgcc gccaggactg tcgacatgaa ccaccacggc gcgcgcggtc
     2761 gacgactgcg caagccgctc gagctgctgc acccgctcgt cgtcgtcgcg gatcagtccg
     2821 cggatcgtca cccgcgcgat ataggcgccg gcgtcggcaa acccggcgcg gcggctccac
     2881 agctcggctg atccggcgat ggcgaggacg atcaccacaa tggcgacgac gcgccagaag
     2941 gtgagcttgc gccgcatgcg gcggcgatcg acgatcaggt cggcgtcaag cgacattgtg
     3001 gtccctttct gcttcctcgc cccgattcga ggagggtcgg gggtgaggga gcgcttccgt
     3061 cggtgccgaa ctcccggaca acctcaccgg aagcgcttcg caataccgct tctccagagt
     3121 gcgcgagaag ccggaggttt cactccttcg tatcgccctt ttcgtcctcc tcgcccttgc
     3181 gcttgagcgc ggtccccaga atgtcgccga gcgtcgcgcc ggaatcggac gagccgtatt
     3241 gtgcgatcgc ctccttctcc tcggcgactt cgagcgcctt gatggaaacc gaggccttgt
     3301 gcgcgcggcg gtcgaactgg ataacgcggg catcgacctt ttggccgacg gcaaatcgat
     3361 cgggccgctg ctcggaacga tcgcgggcaa gctccgagcg cttgatgaag gtggagagat
     3421 cggtgccgac gatcttcacg tcgatgcctc cttccttgac ctccgtgacc tcgcaggtca
     3481 cgacggcgcc cttcttgagt tcgccggccg ccgcgggctc ggcggcgacg ccgtcgtccg
     3541 cgagctgctt gatgcccagc gagatgcgct ccttctcgac gtcgacgtcg agcacctgcg
     3601 ccttgacctt gtcgcccttc ttgtactcct cgatcacctg ctcgcccggc cgtttccagt
     3661 cgaggtcgga caggtgcacc atgccgtcga cgtcgccgtc gaggccaagg aacaggccga
     3721 actcggtctt gttcttgacc tcgccctcga ccaccgatcc ggccgggtat ttctcgacga
     3781 acacctccca gggattgcgc atggtctgct tgagcccgag cgagatacgg cgcttgaccg
     3841 ggtcgacctc aagcacctgc acctccacct cctgcgaggt ggagacgatc tttccgggat
     3901 gcacgttctt cttggtccac gacatttcgg agacgtggat caggccctcg atgcccggct
     3961 ccagttcgac gaaggcgccg tagtcggtga tgttggtgac gcggcccttg aagcgggcgc
     4021 cgaccggata tttggcctcg atgccctgcc acgggtcgtc gagcagctgc ttcatgccga
     4081 gcgagatgcg gtgggtctcg tggttgatct tgatgatctt gaccttcacc tgctggccga
     4141 tgttgagcac ctcggaggga tgattgaccc gccgccaggc gatatcggtg acatggagaa
     4201 gtccgtcgat gccgccgaga tcgacgaagg cgccgtaatc ggtgatgttc ttgaccacgc
     4261 cgtcgatgac ctgaccctct tcgaggttct gtaccagctc ctgacgctgc tcggcgcggg
     4321 tctcctccag caccgtgcgg cgcgagacca cgatgttgcc gcgccggcga tccatcttca
     4381 ggatctggaa cggctgctga ttattcatca gcggcgacac gtcgcgaatc ggccggatat
     4441 cgacctgcga gcgcggcagg aacgccacgg cgccatcgag atcgacggtg aagccgccct
     4501 tcacctgatt gaagatgacg ccctgcacct tttcattgtt ctggaacgcc ttctcgagct
     4561 tgccccagct ttcctcgcgg cgcgccttgt cgcgcgagag cacggcttcg cccagggcat
     4621 tttccacgcg ttcgagatag acctcgacga tgtcgccgac cttgatctcg gcggcgcggc
     4681 cggccccggc gaattcgcgc aacgccacgc gtccttcggt cttgagcccg acgtcaatga
     4741 ccgcgacgtc cttttcgatg ccgacgaccg tccccttgac gacggaccct tcctgcaggt
     4801 gaccgtcgct gaacgactca tcgatcatgc tggcgaagtc ttcgcgcgac ggcgcggcgg
     4861 tagcaacttg agccatgaac actccggacc cctgaatgaa acgatcccga acgcgcggcg
     4921 gccgccggca gcgccggcgg ttggggccta ggccatacga tcgggacaaa gccaggtccg
     4981 gggccgcaca tgcgaagcag ctaacgggct gaacctccaa tgacgaaagc gcggtcagct
     5041 gcgctttcgg cccgttcgga cggcctcgat gatatcaacg gcggcccgga atgcggcgtc
     5101 tatacccaaa tgtgtggtat cgagcaagtg agcgtcggga gcggccttga gcggcgcggc
     5161 gctccgccgc gaatcgcgct cgtcgcgccg caacagctcg gccaggacct cgccctcgtc
     5221 ggcttgctcg ccccgcccgc gcaactcgag aacgcggcgc gcggcgcgca cttccggcgt
     5281 tgcgacgacg aacagcttca cgtcggcacc gggggcgatc accgtgccga tatcgcggcc
     5341 gtcgagcacc gcgccgggac ggcgcaccgc gaattcgcgc tgataattca tcaaagcttg
     5401 acgcacttcc gggatcgccg cgaccaccga ggcggcctcg gtgatcacct gcgccttgag
     5461 cgcaattgca tcgaattgag tggggtcgag cgcgatcgcg gcgtcgatcg cgcgcggcgc
     5521 atcgtcgggc gaa
//
LOCUS       DATMQB010000033         3899 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3728688, whole genome shotgun sequence.
ACCESSION   DATMQB010000033 DATMQB010000000
VERSION     DATMQB010000033.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3899)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3899)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3899
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3728688"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2336
                     /gene="pheT"
                     /locus_tag="VNY79_01175"
     CDS             <1..2336
                     /gene="pheT"
                     /locus_tag="VNY79_01175"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HWX71088.1"
                     /translation="GLEVERVEDKAKLLAPFVIARVVEAKQHPNADRLRVCMVDTGGG
                     DPIQVVCGAPNARTGMKGVFVPPGAFIPGKNMTLAVGSIRGVESRGMLVSEFELQLSD
                     DHEGIIDLPDDAPIGANYAQWAGLGDPMIEINLTPNRADCTGVHGIARDLAAADMGKL
                     KDASIKPVKGAFPCPVRVTLDFGATPSLCPAFALRHVRGVKNGPSPDWLQRRLTTIGL
                     RPINALVDITNFITYDGGRPLHVFDAAKVRGDLVVRRARAGETLLALDGKSYALDESI
                     CVIADEDGVESLAGIMGGEKTGCSAATTDVLIESALWDPPNIAQTGRKLGINSDARYR
                     FERGVDAAFMLPGLELAARMVLDLCGGTPSEITVAGDPQAPERVIDFPISEIKRLAGI
                     AVPLPEVRRVLERLGFFAAGQGERVKVAVPSWRPDIHNKADLVEEVVRILGVDRVPFT
                     PFDRGEAPRRPVLTPIQQRTRKAKRALAARNLIEAVTWSFLGKKHAELFGGGEPQLAL
                     ANPIAADLSDMRPSLIPGLVSAAQKNADRGFPDMALFEVGQVFRGDAPQDQLTAAAGV
                     RRALGKPSGIGRHWTKRDGEVDAFDAKADAFAVLAAAGAPAQALQVVPGGPPWFHPGR
                     SGTIQIGPQNVLGHFGELHPSALEALDAQGPLVAFEVILERIPEPKAKATRAKPVLEL
                     SSFQPVERDFAFVVDRKVKAADVVRAAASVDRKLIAGVTVFDVYEGPGIEPGKKSIAI
                     AVTLQPRDKTMTDAEIEALAAKIVAEVGKRTGGVLRG"
     gene            complement(2350..3795)
                     /locus_tag="VNY79_01180"
     CDS             complement(2350..3795)
                     /locus_tag="VNY79_01180"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HWX71089.1"
                     /translation="MPRLSRRSFLAASAALAARPAAGAAPLRSEADVVIVGAGAAGIA
                     AARRIAAAKRKVVVIEAADHAGGRCITDMTTFGVPYDRGAHWIHVPDLNPVTKAAPRR
                     GLDIYPAPASQKVRIGRRYARQGELEDFLAVRVRANRAIIEAARKGDVACGQALPRDL
                     GDWRAAVEFVLGPFGCGKELAEVSAVDFAKSAERDVDAFCRQGFGTLLASLAQGVPVE
                     LSTPATAIDLRRSVEVETPKGTIVARAAIVTASTNVIASGAIKFTPGLPARQLEAMAK
                     LALGSYDHIALELANNPLGLESDDLVFEKSVNTSTAAILANVSGTSLCFVDVAGKFGR
                     DLAGQGEAAMVDFAAEWLAGLYGADVKKTIKRSHATRWIQEPLALGAFSAAAPGGQSA
                     RRTLMEPVHDAIWFAGEAVHETLWGTVGGAWESGERAADAVLHRLGGQKEPVPVDAET
                     AASKSKREPKRPAPVQRQRFEAQPRIMRDGY"
BASE COUNT          600 a         1346 c         1333 g          620 t
ORIGIN      
        1 tcgggctcga ggtcgagcgc gtcgaggaca aggcgaagct cttggcgccg ttcgtcattg
       61 cgcgcgtggt cgaggccaaa cagcatccca atgccgaccg gttgcgcgtc tgcatggtgg
      121 ataccggcgg cggcgatccg atccaggtgg tgtgcggcgc gcccaatgcg cgcaccggca
      181 tgaagggcgt gttcgtgccg ccgggcgcgt ttatccccgg caagaacatg acgctcgccg
      241 tcggcagcat ccgcggcgtc gagagccgcg gcatgctcgt ctccgaattc gagttgcagc
      301 tttccgacga ccacgaaggc atcatcgacc tgccggatga tgcgccgatc ggggcgaact
      361 acgcgcaatg ggccggcctc ggcgatccca tgatcgagat caacctgacg ccgaaccgcg
      421 ccgactgcac cggcgtgcac ggcatcgccc gcgatctcgc cgccgctgat atggggaagc
      481 tcaaggacgc gagcatcaag ccggtgaagg gcgcgtttcc ctgtcccgta cgcgtgacgc
      541 tcgatttcgg cgccacgcct tcgctctgtc ccgccttcgc gctgcggcac gtgcgcggcg
      601 tcaagaacgg tccatcgccc gactggctgc agcggcggct caccacgatc ggactacgcc
      661 ccatcaatgc cctcgtcgat atcaccaatt tcatcaccta cgacggcggc cggccgctgc
      721 atgtgttcga tgccgcgaag gtgcgcggtg atctcgtggt gcggcgggcg cgcgccggcg
      781 agactctcct cgccctcgac ggcaagagct atgcgctcga cgaatcgatt tgcgtcatcg
      841 ccgacgagga cggcgtcgag tcgctcgccg gcatcatggg cggcgaaaaa accggctgtt
      901 cggcggcgac gaccgacgtg ctcatcgaat cggcgttgtg ggacccgccg aacatcgcgc
      961 agaccggccg caagctcggc atcaattccg acgcgcgtta ccgcttcgag cgcggcgtcg
     1021 atgcggcgtt catgctgccc gggctcgagc tggcggcgcg catggtgctc gatctctgcg
     1081 gcggcacgcc ctcggaaatc accgttgccg gcgatccgca ggcgcccgag cgcgtcatcg
     1141 attttccgat ctccgagatc aagcggcttg ctggcatcgc cgtgccgctg ccggaggtgc
     1201 gccgcgttct cgagcggctc ggcttcttcg cggccggcca gggcgagcgg gtcaaggtcg
     1261 cggtaccgtc gtggcgtccc gacatccaca acaaagccga cctcgtcgag gaggtggtgc
     1321 gcatcctcgg cgtcgaccgg gtgccgttca cgccgttcga tcgcggcgag gcgccgcgcc
     1381 gaccggtgct cacgccgatc cagcagcgca cgcgcaaggc caagcgcgcg ctcgccgccc
     1441 gcaatctgat cgaggcggtg acctggtcgt tcctcggcaa aaagcacgcg gaattgttcg
     1501 gcggcggcga gccgcaactt gcgctcgcca atccgatcgc ggccgatctt tccgatatgc
     1561 ggccgagtct cattcccgga ctcgtcagtg ccgcgcagaa gaacgccgac cgcggcttcc
     1621 ccgacatggc cctgtttgaa gtcggccagg tgtttcgcgg tgatgcgccg caggaccagc
     1681 ttaccgccgc cgccggcgtt cgccgcgcgc tgggcaagcc gtcgggcatc ggtcgccact
     1741 ggacgaagcg cgatggcgag gtcgacgcgt tcgacgctaa agccgatgcg ttcgccgtgc
     1801 tggccgcagc cggtgccccg gcacaggcgc tgcaggtcgt gccgggcggt ccgccctggt
     1861 tccatcccgg ccgctcaggg acgatacaga tcggcccgca aaacgtcctc gggcatttcg
     1921 gcgaattgca tccgagcgcg ctcgaggcgc tcgacgccca aggtccgctc gtcgccttcg
     1981 aggtgatcct ggagcgcatt cccgagccga aggcgaaagc gacgcgcgcg aagccggtgc
     2041 tcgagctttc atcgttccag ccggtcgaac gcgattttgc tttcgtcgtc gaccgcaagg
     2101 tgaaagccgc cgacgtggtg cgcgccgcgg cctcggtcga ccgcaagctg atcgccggcg
     2161 tcaccgtgtt cgatgtttac gagggtccgg gtatcgagcc gggcaagaaa tcgatcgcga
     2221 tcgcggtcac gctgcaaccg cgcgacaaga ccatgaccga tgccgagatc gaggcgctgg
     2281 ccgcgaagat cgtcgccgag gtcggcaagc gcaccggcgg cgtgctgcgc ggatgagcgt
     2341 cggccggcgt caatacccgt cgcgcatgat gcgcggctga gcctcaaatc tctgccgctg
     2401 caccggcgcc ggacgcttgg gctcccgctt ggatttggaa gctgccgtct cagcgtcgac
     2461 cggaactggc tccttctgac cgccgagccg gtgcagcacc gcatcggccg cgcgctcgcc
     2521 ggattcccag gcaccgccga ccgtgcccca taacgtctcg tggacggcct cgcccgcgaa
     2581 ccagatagcg tcgtgcaccg gctccatgag ggtacggcgc gcgctctgcc cgccgggcgc
     2641 cgcggcggaa aaggcgccga gcgccaacgg ctcctggatc cagcgcgtgg catgcgagcg
     2701 cttgatcgtt ttcttcacgt ccgcgccgta gaggccggcc agccattcgg ccgcgaaatc
     2761 aaccatcgcc gcctcgccct ggccggcaag atcgcggccg aatttgccgg cgacgtcgac
     2821 gaagcaaagc gacgtgccgg aaacgtttgc gaggatcgcg gcggtgctcg tgttgaccga
     2881 tttctcgaac accagatcgt cgctctcgag cccgagcgga ttgttcgcca gttcgagcgc
     2941 gatgtggtcg tagctgccga gcgcgagctt ggccatggcc tcgagctgcc gcgcgggcag
     3001 cccaggcgtg aacttgatgg cgccggacgc gatcacgttg gtcgaggcgg tgacgatggc
     3061 ggcgcgggcg acgatcgtgc ccttcggcgt ttcgacctcg acgctgcgcc gtagatcgat
     3121 cgcggtcgcc ggcgtcgaca attcgaccgg gacaccctgg gcgaggctgg cgagcagcgt
     3181 gccgaaaccc tgccggcaga aggcatcgac gtcgcgttcg gcggatttcg cgaaatccac
     3241 ggccgagact tccgcaagct ccttgccgca gccgaacggg ccgagcacga actcgactgc
     3301 cgcccgccag tcgccgaggt cgcgcggtag cgcctgcccg caggcgacgt cacccttgcg
     3361 cgcagcctcg atgatcgcgc gattggcgcg cacgcgcacg gccaggaaat cctcgagctc
     3421 gccctgccgg gcgtagcgtc ggccgatgcg caccttctgg ctcgccggcg ccggataaat
     3481 gtcgagcccc cggcgcggcg ccgccttggt caccgggttg aggtcgggca catggatcca
     3541 gtgggcgccg cggtcatagg gcacgccgaa agtggtcata tcggtgatgc agcggccgcc
     3601 ggcgtgatcg gccgcctcga tcaccacgac cttccgcttg gccgccgcaa tccgccgcgc
     3661 cgcggcaatc ccggcggcgc ccgcgccgac gatgacgaca tcggcctcgc tgcgaagcgg
     3721 tgcggcgccg gcggcgggtc gcgccgcaag cgcagccgag gcggcaagga acgagcggcg
     3781 gctcaatcgc ggcatggctt ggggatgcct gctctcgcgc agattgcccg aacggctggc
     3841 gaggcgcaaa cgtggcggcg tgcttgtgag cacttgtgcc ggttcgccgg cgtctttac
//
LOCUS       DATMQB010000034        19755 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1248086, whole genome shotgun sequence.
ACCESSION   DATMQB010000034 DATMQB010000000
VERSION     DATMQB010000034.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 19755)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19755)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19755
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1248086"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..142
                     /locus_tag="VNY79_01185"
     CDS             <1..142
                     /locus_tag="VNY79_01185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711985.1"
                     /note="Provides the input to the respiratory chain from
                     the NAD-linked dehydrogenases of the citric acid cycle.
                     The complex couples the oxidation of NADH and the
                     reduction of ubiquinone, to the generation of a proton
                     gradient which is then used for ATP synthesis; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NADH:ubiquinone oxidoreductase subunit NDUFA12"
                     /protein_id="HWX71090.1"
                     /translation="RQYRWEKPHRPNLTGTAGAQRPSGSTLAQGRRPKATGDYKAWTP
                     GR"
     gene            626..1129
                     /locus_tag="VNY79_01190"
     CDS             626..1129
                     /locus_tag="VNY79_01190"
                     /inference="COORDINATES: protein motif:HMM:NF021444.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2155 domain-containing protein"
                     /protein_id="HWX71091.1"
                     /translation="MPTQKIANGRAVFSGLDKITGRIIAFDASIGETVQFGALQVTAR
                     VCYTRPPTEPTNTDAFLEVDEVTLQGEVKRIFTGWMFAASPGLHAVEHPIYDVWLTDC
                     ASPQQTPVAQPVLPPAPAPAAGAANTHPPGQPRVRQAAPRQRVAPPATAAGPPLAPAP
                     PGLPEPR"
     gene            complement(1256..1930)
                     /gene="aat"
                     /locus_tag="VNY79_01195"
     CDS             complement(1256..1930)
                     /gene="aat"
                     /locus_tag="VNY79_01195"
                     /EC_number="2.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008914 - leucyl-tRNA--protein transferase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl/phenylalanyl-tRNA--protein transferase"
                     /protein_id="HWX71092.1"
                     /translation="MASRESALVDITPEVLLKAYACGIFPMAESADDPALYWIEPERR
                     GVIPLDRFHVPSRLARTVRSARFNVLVDRDFDGVIAGCSEPMPGRSRTWINARIRALY
                     RKLFDRGDCHTVEVYEGGELVGGLYGVSLGGAFFGESMFHRVRDASKVALVHLVARLK
                     AGHYRLLDTQFVTDHLRTFGAVEVSRPAYHKLLDAALIGDGDFGALAVDRPVAGGEVL
                     ARLAAA"
     gene            2135..2536
                     /locus_tag="VNY79_01200"
     CDS             2135..2536
                     /locus_tag="VNY79_01200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HWX71093.1"
                     /translation="METIVSDVAPIRVLIVEDEFLICEWVAEALGEQGFAVHTVSNAR
                     DALRHLASAPVDVLFTDINLPGGMDGAALARRARDMMPELGVVYASARRMPDAQERVP
                     GSIFVPKPYVPTLVGRLLASARKSTAACVPA"
     gene            complement(2600..3952)
                     /gene="accC"
                     /locus_tag="VNY79_01205"
     CDS             complement(2600..3952)
                     /gene="accC"
                     /locus_tag="VNY79_01205"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_function: GO:0004075 - biotin carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HWX71094.1"
                     /translation="MFDKILIANRGEIALRVLRACKELGIATVAVHSTADADAMHVRL
                     ADESVCIGPPPARDSYLNIPALLAACEITGADAVHPGYGFLAENARFAEILAEHNVDF
                     IGPRPEHIRLMGDKIAAKRAAKQLGIPTVPGSDGGIGSDAEAYRLARDVGFPLMLKAS
                     AGGGGRGMKVVRAESELASALATARAEAKASFGDDTLYLEKYLERPRHIEIQVLGDGK
                     GRAIHLGERDCSLQRRHQKVWEEGPSPALNTAARDQVAETVAKAMRDIKYLGAGTVEF
                     LYEDGKFNFIEMNTRIQVEHPVTEMITDIDLVAEQIRVAAGNDLALAQGDVKFHGHAI
                     ECRINAENPVSFRASPGKIVHYHPPGGLGVRIDSAVYHGYAIPPFYDSLVGKLIVHGK
                     TRSECLMRLRRALDEVVIEGIETTLPLFRALARENEIIDGDYHIHWLEEFLARGSLEQ
                     "
     gene            complement(4047..4514)
                     /gene="accB"
                     /locus_tag="VNY79_01210"
     CDS             complement(4047..4514)
                     /gene="accB"
                     /locus_tag="VNY79_01210"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HWX71095.1"
                     /translation="MPKTPAIDHAVIRELAKLLDETGLTEIEFQRDGVSIRVARNVHV
                     SARGRAAELPIGGAAATALVGPVQATAPIDPTQHPGVVASPMVGTAYIGPSPGARPFV
                     EVGSEVKAGETLIIIEAMKTMNQIPAPRSGTVTQILVEDGQPVEYGEPLMIIE"
     gene            complement(4544..5008)
                     /gene="aroQ"
                     /locus_tag="VNY79_01215"
     CDS             complement(4544..5008)
                     /gene="aroQ"
                     /locus_tag="VNY79_01215"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003855 - 3-dehydroquinate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II 3-dehydroquinate dehydratase"
                     /protein_id="HWX71096.1"
                     /translation="MSKIIYILNGPSLNLLGTREPEIYGRSTLADVEKLCRSTAERHG
                     FAVEFRQSNHEGAIVDWIQEARAKGAAGLVLNPAGYTTTSVAILDALLAMEAPVVEVH
                     ISNIHAREPFRRHSYVSRAARAVICGFGIEGYALAIAGLAAMTAATQGRAKD"
     gene            complement(5180..5896)
                     /locus_tag="VNY79_01220"
     CDS             complement(5180..5896)
                     /locus_tag="VNY79_01220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HWX71097.1"
                     /translation="MLLALPTAASAETQKFSPEQRHEIEGIVKEYLLAHPEVMQDVIA
                     ELDKRQQAVELEKHRSAVEENSKALFSSPHQVVLGNPQGNVTMVEFFDYNCGFCRRAL
                     ADMLDLLKSDPNLKFVLKEFPVLGEGSVEAAHVAVAARMQDATGKKYIEFHQKLLGGR
                     GQADKARALAVAKDVGFDMARIEKDMASDEAKKTIEENMKLADALGVSGTPSYVVGSE
                     VVIGAVGLDALRDKITAERK"
     gene            complement(5960..7294)
                     /locus_tag="VNY79_01225"
     CDS             complement(5960..7294)
                     /locus_tag="VNY79_01225"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HWX71098.1"
                     /translation="MPARAQTGASAGIPMIRDAEIEQLLREYTQPILRVAGLSQQNVH
                     VVIINENAFNAFVMDAHRIFVFSGALMQATTPNQMIGVFAHETGHIAGGHLSKMRQEL
                     ANAQTAAIVAMLLGVGAMVAGARSNSMDMSQVGMAALSAPQAYLQHTLLAYQRAQEEQ
                     ADRAGVRFLTMTGQSAKGMYETFKHFADEVMFSSSTIDPYVQNHPMPSERMAALAEMA
                     KTPYWDKKDPAELQFRHDMMRAKLYGFTERPGAVMRHYPATNNSIPARYARAISAYRF
                     GDLRAAVGQIDGLIGAMPSYPYFYELKGQALLEGGHPAEAIAPLRHAVELAPNPALIQ
                     ITLAQALIATNNAKTADEAVPLLRAAIAKEPESGDAYEQLAMAYGRKGDLGDADLASA
                     QAAFARGDNKTARELAARAKMRFPVGSPGWVRADDIVAFNKNLKQNPLRAGQ"
     gene            7566..8750
                     /locus_tag="VNY79_01230"
     CDS             7566..8750
                     /locus_tag="VNY79_01230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HWX71099.1"
                     /translation="MLERAKFLLQPSTRGAVPPFMVMDVVAAAARLEAQGRRIIHMEV
                     GQPAAAAPATAIAAARAALSSGPLGYTETLGIASLRRRIARAYGEWHGLDLDPARIVV
                     TTGSSAGFMLAFLAAFEAGDRVAMALPGYPPYRHILAALGCEPVGIETTASARWSLTG
                     EALLALHRARELKGIILASPANPTGTMMTAAALAELIRCAEEAGIAVISDEIYHGLDY
                     AFAAETAARISPDAIVVNSFSKYFCMTGWRIGWMVVPPALVRTVERLQQNLAISVPTL
                     SQIAAEAAFDGRPELEEVRHGYEDNRRILLDGLPGAGLDTFLPPDGAFYLYADVSRFS
                     NDSFTFATRMLEEAGVASTPGIDFDPVHGKNFLRLCYAGAGAEMREAVGRIGDWLRKG
                     AF"
     gene            8763..9464
                     /locus_tag="VNY79_01235"
     CDS             8763..9464
                     /locus_tag="VNY79_01235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease activity regulator RraA"
                     /protein_id="HWX71100.1"
                     /translation="MSDMLFDILRQVTTATITTILLRKGIRRCWMNGPKPLSGTDERV
                     VGPAFTLRFVPVREDLATPESWGSPISTRAAIEEMPEGAVVVADAMGVPGAGIFGDIL
                     CARMKKRNIAALVTDGVLRDRAGVGRSGLPIWCSGVAAPASVNGLTFVGWQQPIGCGG
                     CAIFPGDVIVADDDGAVVIPQAMVEFVAHEGAEHELYESWVVGEVENGVKLPGLYPPN
                     DEAKARYAAWRKSRS"
     gene            9477..10271
                     /locus_tag="VNY79_01240"
     CDS             9477..10271
                     /locus_tag="VNY79_01240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HWX71101.1"
                     /translation="MFFILSKVLGFFALPSNLLITIGLVGLVLLLTRSRRLASWLVVT
                     SLVLLALFGLSPLGNLLMLPLEERFPPWDASHGAPDGVIVLGGIIAEDVSAARGATAL
                     NEAAERVTVAVELARRYPNLRIIFSGGTNALIFGEEAEAAFAVRQLEALGVPHERITA
                     EEQSRNTVENAVFSRLIANPRPGQRWLLLTSAYHMPRAIAVFRAAGFPVEAYPVDWRT
                     TGPIDRVRPFPSVSEGLRRTDVAVHEWIGLLLYRLTGKTAELFPGP"
     gene            10451..10618
                     /locus_tag="VNY79_01245"
     CDS             10451..10618
                     /locus_tag="VNY79_01245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71102.1"
                     /translation="MPRGALFAPSDNERAEVGADRRPAIIRWIAPALTVLFVAAAVLV
                     VSLVAAVAGLL"
     gene            10692..11366
                     /locus_tag="VNY79_01250"
     CDS             10692..11366
                     /locus_tag="VNY79_01250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HWX71103.1"
                     /translation="MGLQLVIGNKNYSSWSFRPWLAMKVARIAFEETVIPLDAPDFKS
                     RLTALSGAGKVPVLIEGDTRVWESLAILEYLAEKFPEASLWPRDAQARAHARAISAEM
                     HAGFQALRRELPMNMRRPVKPHPLAVDAAADVARIEAIWSDCRRRFGLGGPFLYGAFG
                     AADAMYAAVVSRFHTYGVEVGAVAREYMRAITALPAWSEWREAGRREPGVLPHDEVDW
                     PAAPRE"
     gene            complement(11398..11787)
                     /locus_tag="VNY79_01255"
     CDS             complement(11398..11787)
                     /locus_tag="VNY79_01255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YccF domain-containing protein"
                     /protein_id="HWX71104.1"
                     /translation="MSPTSLVLNVLWIVFGGLWMAAGWLLAAVIMAITIIGLPWARSA
                     LTIAVYTFLPFGHTVVDRPSGIGSGPLGCLGNVIWLVLAGWWLALAHLITALGLAITI
                     IGLPFAWAHLKLAGLALWPIGKDVVTT"
     gene            complement(11869..12342)
                     /locus_tag="VNY79_01260"
     CDS             complement(11869..12342)
                     /locus_tag="VNY79_01260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HWX71105.1"
                     /translation="MRRSAEVSAGLLAFRRRDGLEVLLAHPGGPFWARKDEGVWTIPK
                     GVAEPGSDLLATARREFSEETNLAAAGDFVALTPVRQKSGKMVHAWALEADFDLSPFA
                     SNMFEIEWPPRSGRRQAFPEIDRIGWFATAAAMVKILAYQRPLLMELQQHIAAKP"
     gene            12532..13698
                     /locus_tag="VNY79_01265"
     CDS             12532..13698
                     /locus_tag="VNY79_01265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NEW3 domain-containing protein"
                     /protein_id="HWX71106.1"
                     /translation="MRYRFIAALAAFAALLAPLAKADDAPKDVKGLYLMSDYPAVTVR
                     PGETSAINLRLHNYGLPPERVNLSVSGVPAGWTATLMGGGQPVAAAMPATNAGVSLEL
                     RLDVPKNAAVGTQTLTVAASGDSTKAELPVAITLAKDLPAKLTLTPQLPELRGTSKSS
                     FEFQLAIKNDSGKKLTVSLAAQAPQNFDATFTEQYGSQELNAVPVDAGQTKDVKLKVR
                     PPNTAAAGSYKVMARVGAEDATATAELIMDITGQPKLDISGREGLVSMRASAGKESSV
                     PVVITNTGTAPADEVELSGSAPGGWKITFEPKSIERIAPNETKEVQALITPTEKAIAG
                     DYVTTVRASARGESASATFRVTVTTSTMWGMAGVGIIGVALLVMVGAVARFGRR"
     gene            13695..14669
                     /locus_tag="VNY79_01270"
     CDS             13695..14669
                     /locus_tag="VNY79_01270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019858803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX71107.1"
                     /translation="MSGDIVIEAHGLTKTYGRATAVDHISFSVERGEVFGLLGPNGAG
                     KTTTILMLLGLTEISGGDVRVLGFNPAREPLSVKRRVGYLPDTVGFYDQLTAADNLRY
                     TARLIGFKAIDREKRIAAALDQVGLSDFADKGVGTFSRGMRQRLGLAEILMKGAQIAI
                     LDEPTSGLDPHATSELLAIIRGFKAEGVSVLLSSHLLERVQSVCDRVALFSGGRIALM
                     GTVAELGRAVLGGGFVVDIEAEGAGLAERLALIPGVSGVEKTGIAKLRLHADRDVRPE
                     AAAEVVAMQGRLKYLGVQEPNLDAIYTRYFATRPDEEMPMKEGTLHAA"
     gene            14659..15624
                     /locus_tag="VNY79_01275"
     CDS             14659..15624
                     /locus_tag="VNY79_01275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020479881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX71108.1"
                     /translation="MRREGSAFQGLGVVTLKELADHLTSIRLFVLELLVMVIALVTVY
                     LATEQIRETTAEDPFLFLKLFTTTREQSPFSFLFFLSFLVPLMAIGLGFDSVNSEYNQ
                     RTLSRILSQPIYRDALLFGKFLGALVTLAIALIVLWLSVIGLGLLFIGIPPGGEEVAR
                     IFVFLLVTIVYAGVWLALALLLSILFRSAATAALTCLGLWLFLYVIWPMLAGQIAQII
                     VPPDPRYTALGLQTPGTAVLEQILSRLSPSTLFGEVVVALLDPTTRSLGPIYLSQMQG
                     AVLGAPLPIAESMLIAWPQTVGMVATAILLFVIGYVIFQRQEVRA"
     gene            complement(15710..16471)
                     /locus_tag="VNY79_01280"
     CDS             complement(15710..16471)
                     /locus_tag="VNY79_01280"
                     /inference="COORDINATES: protein motif:HMM:NF018527.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1236 domain-containing protein"
                     /protein_id="HWX71109.1"
                     /translation="MKMQTKTLLAGVAALALMAGTGFASAEEQKPAKQPQTSAQPMKS
                     GAAPSAQQKTGASHMGQNAQPSGHKMGMEQPTPRGKSTAQQPTKGMERFGQSTSSKGV
                     SPTTTGQQAEQINRGKKGNLERSGTAQTEQKGSVTTRGTRTTGTTVTEHRTGRNGLQG
                     LQGNASHVTLSDEQRTKLRQTVIGAHGAPRVSHVDFDLAVGTVIPRGRIHIVPVPRML
                     VDIEPTWRGFLYFIYEDELVIVDPRDLRIVAVLPV"
     gene            16672..18216
                     /locus_tag="VNY79_01285"
     CDS             16672..18216
                     /locus_tag="VNY79_01285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009452230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HWX71110.1"
                     /translation="MRDLIEELQQRRTKAAEGGPSRARERYLSRGKLLPRDRVMTLID
                     PGAPFLELSPLAADGMYGEPVHAAGIITGIGRIAGRECVVVCNDSTIKGGTYYPLTVK
                     KHLRAQEIARENRLPCIYLVDSGGANLPHWTEVFPDREHFGRIFFNQATLSAAGIPQI
                     AVVMGSCTAGGAYLPAMSDETIIVRNQGTIFLGGPPLVKAATGEVVSAEELGGADVHA
                     KRSGVADYYAENDRHALALCRRIVGTLNTRKSIDIPLAKPAEPKYDARELDGIVPVDL
                     KKQYDVREVIARVVDGSEFDEFKALYGTTLVTGFAHIHGIPVGILGNNGILFSESALK
                     AAHFIELCCQRRVPLLFLQNIVGFMVGRDYEAGGIAKDGAKMVTAVACAQVPKITVVI
                     GGSYGAGNYGMCGRAYSPRFLFTWPNARISVMGGEQAASVLATVRRDNLEAAGKSWSE
                     VEEEEFKQPIRDQYEAEGNPYYATARLWDDGIITPSETRRVLALCFSAALNAPIPETK
                     FGVFRM"
     gene            18658..19059
                     /locus_tag="VNY79_01290"
     CDS             18658..19059
                     /locus_tag="VNY79_01290"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HWX71111.1"
                     /translation="MRKTITHIHWPDAPDLWMPYAPAIKVSGGTTVYLAGVTAAPVYH
                     HHPHRPQEFDAMPRDMGGQARAALENLKRGLQAAGASFADVVTATRFVTDLSDQDALN
                     RVWAEYFGDAKPATTTVQVVASPPIRVALSK"
     gene            complement(19110..19316)
                     /locus_tag="VNY79_01295"
     CDS             complement(19110..19316)
                     /locus_tag="VNY79_01295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018409746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2905 domain-containing protein"
                     /protein_id="HWX71112.1"
                     /translation="MNVQRLLIALGLLILMAGIAWPILSRSGLRRLPGDVVIHRGNTS
                     FYFPLVTCLLVSIALSALFRLFNR"
     gene            19484..>19755
                     /locus_tag="VNY79_01300"
     CDS             19484..>19755
                     /locus_tag="VNY79_01300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HWX71113.1"
                     /translation="MTELSYRTVLIVGVGAGLSASLARTFTKAGMRVALAARRAGELS
                     GLAKEVGGRAFACDATRHAEVAKLFGEVEAAFAAPDVVVYNASYRTR"
BASE COUNT         3191 a         6469 c         6536 g         3559 t
ORIGIN      
        1 gagacaatac cgttgggaga agccgcatcg gccgaacctc accggtacgg cgggcgccca
       61 gcgcccaagc ggctcgacgt tggcgcaggg gcgccgcccc aaggcgaccg gcgactacaa
      121 ggcctggacg ccgggaaggt aaggtatcca agcccgacag tttcactgat ccctggattc
      181 gccgcattcg gcatgttaac cggcgcgacg cgatcacgcg ccgaaactcg atcgcgcgta
      241 aggttccatg ctccgtatcg ccgtcctttt ggccacgctc ggcggaacgc ttgcggcggg
      301 accggtcgcg gcccaatcca ctttcggcga cgcgccgccg cgcccgccgg ccgatattcc
      361 caacggcgcg ttcccggcac agccgccgcc ggtacgattt ccggggcaag aatcggggcc
      421 ggcgtttccg gcgacgcgtt caccctccgg ggtccaaagg cagcccttgc cgccgccagc
      481 cggcgcgacg accgccccgc cagccgctcc cggccaggcg ccgccgcccg ttgagcgcac
      541 gcgcgttacg ccgcagccgg ccaatccgcc tccgccccag ccggcagaca cggcaccgag
      601 gccggacgac acgatcatca ccgaaatgcc gacgcaaaag atcgcaaatg ggcgggcggt
      661 cttctccgga ctcgacaaga tcaccggccg catcatcgcc ttcgacgcgt cgatcggcga
      721 aacggtgcaa ttcggggcgc tgcaggtcac cgcgcgggtg tgctacacgc gcccgccgac
      781 cgagccgacg aacaccgacg cctttctcga agtcgacgag gtgacgctcc agggggaggt
      841 caagcgcatc ttcaccgggt ggatgttcgc cgccagcccg ggcctgcatg cggtcgagca
      901 tccgatctac gacgtttggc tgaccgattg cgcctcgcca cagcagacgc cggtcgctca
      961 gccggtcctg ccgcctgcgc ctgcccctgc cgccggcgcg gcaaacacgc accctcccgg
     1021 tcagccccgc gtgcgccagg ccgcgccgcg tcaacgggtc gcgcccccgg caaccgccgc
     1081 tgggccgcca ttagccccgg cgccgcccgg cctgccggaa ccgcgctaag ccgccaggga
     1141 agcgatcaca tcgcgggcgc gtcggctcaa cagacgaact gccacggccg cttgcggcct
     1201 caactcggcg cgcgttcgag cgcccggtat tggcgccgag cgtgcctcga ggcgatcagg
     1261 ccgcggcgag gcgagcgagc acttcgccgc ccgcgacggg gcgatccacc gcgagcgcgc
     1321 cgaagtctcc gtcgccgatg agcgcggcat cgagcagctt gtggtaggcc ggccgcgaca
     1381 cctcgacggc gccgaacgtg cgcaggtggt cggtcacgaa ctgcgtgtcg agcaggcggt
     1441 agtggccggc cttgagccgc gccaccagat gcacgagcgc gaccttggaa gcgtcgcgca
     1501 cgcggtggaa catgctctcg ccgaagaaag cgccgccgag gctgacgccg tagaggccgc
     1561 cgacgagttc gccgccttcg tacacctcga cggtgtggca gtcgccgcgg tcgaagagtt
     1621 tgcgatagag agcgcggata cgggcattga tccacgtccg gctccgcccc ggcatcggct
     1681 ccgagcagcc ggcaatgacg ccgtcgaaat cgcggtcgac caggacgtta aagcgtgcgg
     1741 atcgcacggt gcgggccagg cggctcggca cgtgaaaccg atcgagcgga atgacgcccc
     1801 gccgctccgg ctcgatccaa tagagcgccg ggtcgtcggc gctctccgcc atcgggaaga
     1861 tgccgcaggc gtaggccttg agcaggactt ccggcgtgat gtcgacgagc gctgactcgc
     1921 ggctggccat ggccgtcgtt tagcttcccc ggtgcgtgcc gttcaagggc gatccacgcg
     1981 gttcgatcga agcgccgcca gccccgaggt gacgcgttgc gcgctgcacc cccttaacgc
     2041 ttcgcaaagg atagtttcac taagattttg ctcaatttga acggttgtag tcgcatgggt
     2101 gttacgctgc cgatcgaaag ggtgggctgc cgccatggaa acaatagtca gtgacgttgc
     2161 gccgattcgg gtcctgattg tcgaggacga gttcctgatc tgcgagtggg ttgctgaagc
     2221 gctcggggag cagggcttcg ccgtgcatac ggtgagcaat gcgcgtgacg ccttgcggca
     2281 ccttgcgtcg gcgccggtcg acgtgttgtt caccgacatc aatctgccgg gcggcatgga
     2341 cggtgccgcg ctcgcgcgcc gtgcgcggga catgatgccc gagcttggtg tcgtctatgc
     2401 ctccgcgcgg aggatgccgg atgcgcaaga gcgcgtgccc ggatcgatct tcgttcccaa
     2461 gccgtatgtg ccgacgctcg tcggccgcct cctcgcgagc gctcggaaat cgaccgccgc
     2521 ctgcgttccg gcttgagcgc cgctgttagc gagcaaacgc aaccttcggg tacgcggaac
     2581 tgactttggg ttgtgcgctc tactgctcga gggagccgcg cgcgagaaac tcctcgagcc
     2641 agtggatgtg gtaatcgccg tcgatgatct cgttctcgcg cgccagggcg cggaacagcg
     2701 gcagcgtcgt ctcgatgccc tcgatcacca cctcgtcgag cgcgcgccgc aggcgcatga
     2761 ggcattcgct gcgtgtcttg ccgtggacga tgagcttgcc gacgagcgag tcgtagaacg
     2821 gcggaatcgc atagccgtgg tagaccgcgg aatcgatgcg cacgcccaat ccgccgggcg
     2881 ggtggtagtg cacgatcttg cccggcgacg cgcggaacga caccggattc tcggcattga
     2941 tgcggcattc aatggcgtgg ccgtggaact tcacatcgcc ctgcgcgagc gccaggtcat
     3001 tgccggccgc gaccctgatc tgctcggcga cgaggtcgat atcggtgatc atctcggtca
     3061 ccgggtgctc tacctggatg cgggtattca tctcgatgaa gttgaacttg ccgtcctcgt
     3121 agaggaattc gacggtgccg gcgccgagat atttgatgtc gcgcatcgcc ttggccacgg
     3181 tttcggcgac ctggtcgcgg gcggcggtgt tgagggcggg cgaggggcct tcctcccaga
     3241 ccttctggtg gcggcgttgc agcgagcagt cgcgctcgcc gagatggatg gcgcggccct
     3301 tgccgtcgcc cagcacctgg atttcaatat ggcgcggccg ttccaggtat ttctccagat
     3361 agagcgtgtc gtcgccgaac gaggccttgg cttccgcgcg ggcggtcgcc agcgccgagg
     3421 cgagctcgct ctcggcacgt acgaccttca tgccgcgccc gccgcctccg gcggaggcct
     3481 tgagcatcag cggaaagccg acgtcgcgcg ccaatcggta tgcctccgcg tcggagccga
     3541 tgccgccatc ggagccggga acggtcggga tgccgagttg cttggcggcg cgtttcgccg
     3601 cgatcttgtc gcccatgagg cggatgtgct ccgggcgcgg gccgatgaaa tcgacattgt
     3661 gctcggcgag aatttcagca aagcgggcgt tctcggcgag gaagccgtag cccggatgca
     3721 cggcatcggc gccggtgatc tcgcatgccg caagcagcgc cggaatgttg agatagctgt
     3781 cgcgggctgg cggcggaccg atgcagacgc tctcatcggc gagccgcacg tgcatcgcgt
     3841 ccgcgtcggc ggtcgagtgc accgctaccg tcgcaatgcc gagctccttg catgcgcgca
     3901 gcacgcgcag agcgatctct ccccggttgg caatcaggat cttatcgaac atgcggccgc
     3961 cgcctggagg aaacagcgac aggcgcttct ggccgcagac tggccgaccc tattcgctgc
     4021 tcacccttcg ccattcgcgc gtcgcttcac tcgatgatca tgagcggctc gccgtattcg
     4081 accggttgac cgtcctcgac caggatctgg gtcaccgtgc cggaacgcgg cgcgggaatc
     4141 tgattcatcg tcttcatcgc ttcgataatg atcagcgtct cgcctgcctt gacctcgctt
     4201 ccgacctcga cgaagggccg cgcgccgggg gatgggccga tataggccgt gccgaccata
     4261 ggtgacgcga cgacgccggg atgctgcgtc gggtcgatgg gggcggtggc ctggaccggc
     4321 cctacgagcg cggtcgccgc cgcgccgccg atcggcaatt ccgcggctcg ccctcgcgcc
     4381 gacacgtgca catttcgggc gacccggatc gacacgccgt cgcgctggaa ctcgatctcg
     4441 gtgaggccgg tttcatcgag cagctttgcc agctcgcgga tcacggcgtg atcgatcgca
     4501 ggcgtcttcg gcatcaaccg gctcccggac ttacgcgcca cgatcaatcc ttcgcacgac
     4561 cttgggtggc ggcagtcatc gcggcaaggc cggcgatggc aagcgcgtag ccctcgatgc
     4621 cgaaaccgca gatgacggcg cgcgccgcgc gcgacacata ggagtggcgg cgaaacggct
     4681 cgcgggcatg aatgttgctg atgtgcacct caaccaccgg cgcctccatc gccagcagcg
     4741 cgtcaagaat cgcgaccgag gtcgtggtgt agcctgcggg gttgagaacg agtccggcgg
     4801 cgcccttcgc gcgcgcctct tgtatccagt cgacaatggc gccctcgtgg ttggattgtc
     4861 ggaactcgac ggcaaagccg tggcgttccg ccgtcgaccg gcacagcttc tcaacgtccg
     4921 ccagcgtgga gcggccgtag atctccggct cgcgcgtccc aagcagattg agactggggc
     4981 cgttgaggat gtagatgatc ttcgacatca ccgagtgccg cacgccctat catcggcggc
     5041 ggcaacgccc gccgcgccga attgcgttta tacgaacggc actcgcaaag gggaagcctg
     5101 ccggtctgcg gagcgcctgc gcgccggatc ggcgctcccg cgccgcaggc aagcgcggcc
     5161 cgtccggcgg cagtgtgcgc tacttgcgtt cggcggtgat cttgtcgcgc agcgcgtcaa
     5221 gcccgaccgc tccgatcacc acctcgctgc cgaccacgta gctcggcgtg ccgctgacgc
     5281 cgagcgcgtc ggcgagcttc atgttctctt cgatggtctt cttggcctcg tcgctcgcca
     5341 tgtccttctc gattcgcgcc atgtcgaatc cgacatcctt ggcgaccgcc agcgcgcggg
     5401 ccttgtcggc ctgaccgcga ccgccgagca gcttctggtg aaattcgatg tacttcttgc
     5461 cggtcgcgtc ctgcatgcgt gccgcgaccg cgacgtgggc ggcttcaacc gatccctcgc
     5521 cgagaaccgg aaactccttg agcacgaact tgagatttgg atcggacttc aggagatcga
     5581 gcatgtcggc aagggcgcgg cggcagaagc cgcaattgta gtcgaagaac tcgaccatgg
     5641 tgacattgcc ctgcgggttg ccgagaacaa cctggtgcgg cgaactgaaa agcgccttgc
     5701 tgttctcttc gaccgccgag cgatgctttt caagctcgac cgcctgctgg cgcttgtcca
     5761 gctccgcaat cacgtcctgc atcacctccg ggtgggcgag aaggtattcc ttgacgatgc
     5821 cttcgatctc gtggcgctgc tcgggggaga acttttgcgt ttctgccgat gccgcggtgg
     5881 ggagggccag cagcatcgcg gcggcgaaga gcattgccgt gcgggggctc gatttcatgt
     5941 tcactgtcct tttgcgcgat tattgaccgg cccggagcgg attctgcttc aggttcttgt
     6001 tgaaggcgac gatgtcgtcg gctctcaccc agcccggcga gccgaccggg aaacgcatct
     6061 tggcgcgcgc ggcgagttcg cgggcagtct tgttgtcgcc gcgtgcgaag gccgcctgcg
     6121 ccgaggcaag atcggcatca cccaggtcgc ccttgcggcc ataggccatc gccagctgct
     6181 cataggcgtc gccgctttcc ggctccttgg cgatcgccgc ccgcagcagc ggcaccgcct
     6241 cgtccgccgt cttggcgttg ttggtagcga tgagcgcctg ggcaagcgtg atctgaatga
     6301 gggcgggatt gggcgcaagc tcgaccgcgt ggcgcagcgg cgcgatcgcc tccgctgggt
     6361 gtccgccttc gagcagcgct tggcccttga gctcgtagaa atacgggtag ctcggcattg
     6421 ccccgatcag gccgtcgatc tgcccgacgg cggcgcgcag gtcgccgaaa cggtatgcgg
     6481 agatggcgcg ggcatagcgc gccgggatgc tgttattggt tgccggatag tgccgcatga
     6541 ccgcgcccgg ccgctcggtg aagccgtaca gcttcgcccg catcatgtcg tggcggaatt
     6601 gcagctcggc cgggtccttc ttgtcccagt acggcgtctt tgccatttcc gcgagcgccg
     6661 ccatgcgctc gctgggcatc gggtggttct gcacatacgg atcgatggtg ctcgacgaaa
     6721 acatgacctc gtcggcgaag tgcttgaacg tctcatacat gcccttggcc gattggccgg
     6781 tcatggtgag gaagcgcacg ccggcgcggt cggcctgttc ctcctgggcg cgctgatagg
     6841 cgagaagcgt gtgctgcagg taggcttgcg gcgcgctgag cgccgccata ccgacttggc
     6901 tcatgtccat gctgttggaa cgcgccccgg ccaccatggc gccgacgccg agcagcatgg
     6961 cgacgatcgc cgccgtctgc gcattggcca gttcctggcg catcttggac aggtgcccgc
     7021 cggcgatgtg tccggtctcg tgggcgaaaa cgccaatcat ctggttgggc gttgtcgcct
     7081 gcatcaaggc gccggagaat acgaagatgc ggtgcgcgtc catcacgaag gcgttgaagg
     7141 cgttttcgtt gatgatcacc acgtgaacgt tttgctggct cagcccggcg acgcgcagga
     7201 tcggctgcgt gtattcgcgc aggagctgtt ctatctcggc atcgcgaatc atcgggatgc
     7261 cggccgaggc gccggtctgc gcgcgcgccg gcatgccgcc aatggcgacc gcgacagccg
     7321 tggcaagcgc gacggcgcgc aaggctggcc tcattcgtcg ccgcttgcta ggaggtttct
     7381 cgacaatcat tctgcaacaa agcttaagtc ccccggtcag ggaccgaggc tatggatgga
     7441 gccagttacg gtcaacactc ggccggcgca acgcagcagc gaaagccccc gccgtcacga
     7501 aacccggcga atgcggcagt accggggcgg cgccggtcga tgatcctgat cgtcaaggcg
     7561 aattgatgct cgagcgggcg aaattcctgc tgcagccgtc gacgcgcggc gctgtgccgc
     7621 cattcatggt gatggacgtg gtcgcggcgg cagcgcggct tgaggcgcag ggccggcgca
     7681 tcatccacat ggaagtcggc cagccggcgg ccgccgcgcc ggcaacggca atcgccgcgg
     7741 cgcgcgccgc gctctcctcg ggcccgctcg gctatacgga aacacttgga atcgcctcgc
     7801 tgcggcggcg catcgcccgc gcctacggcg aatggcacgg cctcgatctc gatcctgccc
     7861 ggatcgtcgt taccaccggc tcctcggccg gcttcatgct ggctttcctg gcggcgttcg
     7921 aggccggcga ccgcgtggcc atggcgctac ccggctatcc accctatcgg cacatcctcg
     7981 ccgcgctcgg gtgcgagccc gtcggcatcg agacgaccgc gtcggcgcga tggtcgctca
     8041 ccggcgaggc cttgctcgcg ctgcatcgcg cgcgagagct caaaggcatc atcctggcct
     8101 cgcccgccaa tccaaccggc accatgatga ccgccgcggc gctggcggag cttatccgct
     8161 gcgccgagga ggccggcatc gccgtgatct ccgacgaaat ctatcacggc ctcgactatg
     8221 cctttgccgc cgagaccgcc gcccgcattt cgccggatgc catcgtcgtc aactcgtttt
     8281 ccaaatattt ctgcatgacc ggatggcgga tcgggtggat ggtggttccg ccggcgctgg
     8341 tgcggacggt cgagcgcttg cagcagaatc tggcgatctc cgtacccacg ctctcccaaa
     8401 tcgccgccga agccgccttc gacggacgcc cagagctcga agaggtgcgt cacggctatg
     8461 aggacaaccg gcgcatcctg ctcgacggat tgcccggcgc cgggctcgac acgttccttc
     8521 cccccgacgg cgcgttctat ctttacgccg acgtgtcgcg attctcgaac gacagcttca
     8581 ccttcgcgac gcgcatgctc gaggaggcag gtgtggcgtc gacgccggga atcgacttcg
     8641 accccgtgca cggcaagaac ttcctgcgcc tgtgctatgc cggggccggg gcggagatgc
     8701 gcgaagccgt cggccggatc ggcgattggc tgcgcaaggg cgctttttaa gcgaggcgga
     8761 cgatgagcga catgttgttt gatattctgc gccaggtgac gacagcgacg atcaccacga
     8821 ttctgctgcg gaaaggcatc cggcgctgct ggatgaacgg cccgaagccg ctttccggaa
     8881 cggatgagcg ggtcgtcggg ccggcgttca ccctgcgctt cgtcccggtg cgggaggatc
     8941 tggccacgcc ggaaagctgg ggcagcccga tttccactcg cgccgcgatc gaggagatgc
     9001 cggaaggtgc tgtcgtggtc gccgacgcca tgggcgtgcc cggcgccggc attttcggcg
     9061 atattctttg cgcacggatg aagaagcgca atattgccgc cctcgtgacc gacggcgtgc
     9121 tgcgcgaccg cgccggggtg ggcaggagcg ggcttccgat ctggtgttcc ggcgttgccg
     9181 cgccagcctc ggtcaacggg ctgaccttcg tcggctggca gcagccgatc ggctgcggcg
     9241 gatgcgcgat ctttcctggc gacgtgatcg tcgccgacga cgacggcgcg gtcgtcattc
     9301 cgcaggcgat ggtcgagttc gtcgcgcacg aaggcgccga gcacgaactc tacgaaagct
     9361 gggtggtcgg cgaagtcgag aacggcgtga aactgcccgg cctctatccg cccaacgacg
     9421 aggccaaggc acgctatgcc gcgtggcgca aatcgcggtc ataacggcct ctcgggatgt
     9481 tcttcatcct ttccaaggtc ctcggctttt tcgctctccc ttcgaacctg ctgataacga
     9541 tcgggctggt cgggctcgtt ctcctgctga cgcgctctag gcggctcgcc agctggctcg
     9601 tggtgacgag cctggtgctg ctcgcactgt ttggactatc gccgctcggc aatctgctga
     9661 tgctgccgct ggaagagcgt tttccgccct gggacgcctc gcacggcgcg cccgacggcg
     9721 tcatcgtgct cggcggtatt attgcagaag acgtatcggc cgcgcgcggg gcgacggcac
     9781 tcaacgaggc cgctgagcgg gtgaccgttg ccgttgagtt ggctcgccgc tacccgaacc
     9841 tgcgcatcat cttttccggc ggcaccaacg ccttgatctt cggtgaggag gcggaggcgg
     9901 cgttcgcggt ccgccagttg gaggctttgg gggtcccgca tgaacgcatc acggccgagg
     9961 agcagtcgcg caacacggtc gagaacgcgg tgttctcgcg gttgattgcc aatccgcggc
    10021 cgggccagcg ttggctgctg ctgacctccg cctaccatat gccgcgcgcg atcgccgtat
    10081 tccgcgcggc gggctttccg gtcgaggcct atccggtcga ttggcgcacg accggcccga
    10141 tcgatagggt caggccgttc ccctccgtca gcgaaggtct gcggcgaacc gacgtcgccg
    10201 tgcacgaatg gataggcctg ctgctctatc ggctcacggg caaaaccgcc gaattgtttc
    10261 ccggtccctg accccttgtg tacggcccgc gctgtggata gcgggaccgg ttcgtttcct
    10321 tcaccaaaca ttcaccaatc cccgcgatac attttgctcg tcggcatcag cgatcgggtc
    10381 gcgcgccgcc tccggagcgc gaagtccttg gccctcgttc ttgcccgccg tcccctgggg
    10441 agggattgcc atgccgcgcg gagcgctttt tgcgccctct gacaacgaaa gggcggaggt
    10501 gggggccgat cgccggccag ccatcatacg gtggatcgcg cccgcgctga ccgtgctctt
    10561 cgttgcggcg gccgtcctcg tcgtttctct cgtcgccgcg gtcgccggcc tgctctgatc
    10621 cgccggcttg tttgctcgcg ccggacgact gtgctcaatt ctcgccccga tgagcacggg
    10681 acggagcgtc catgggcctt caactcgtca tcggcaacaa aaactactcg tcctggtcgt
    10741 tccggccatg gctggcgatg aaggtcgcgc ggatcgcgtt cgaggaaacg gtgattccgc
    10801 tcgacgcgcc ggatttcaaa tcgcgcctca cggctttgag cggggccgga aaggtgccgg
    10861 tgctgatcga gggcgacacg cgtgtctggg aatcgctggc gatccttgaa tacctggcgg
    10921 aaaagtttcc cgaggccagc ctgtggccgc gcgatgcgca ggcgcgggcg catgcgcgcg
    10981 cgatttctgc ggagatgcac gccggtttcc aggcgctgcg gcgtgaattg ccgatgaaca
    11041 tgcgccgtcc ggtgaagccg cacccgctcg cggtcgacgc cgcagccgat gtggcgcgca
    11101 tcgaggcgat ctggagcgat tgccgcaggc gcttcgggct aggcggcccg tttctctatg
    11161 gcgcattcgg cgcggccgac gcgatgtatg cggcggtcgt ctcgcgcttt cacacctatg
    11221 gggtggaggt cggcgccgtc gcgcgcgaat acatgcgcgc gatcacggcc ttgccagcct
    11281 ggagcgagtg gcgcgaggcg gggcggcgcg agcccggtgt cctcccgcac gatgaggtcg
    11341 actggccggc ggcgccgcgg gaataaaatg cggtctccct gccgtgcggg ccgcgcctca
    11401 agtcgtcacg acgtccttgc cgatgggcca aagcgcaagt ccggcgagct tgagatgcgc
    11461 ccaagcgaac ggcagcccga taatagtgat cgccaagcct agcgcagtga tcaggtgcgc
    11521 aagcgcgagc caccatccgg cgagcacgag ccaaatgaca ttgcccaggc atccaagcgg
    11581 gccgctgccg atcccggacg gccggtcgac gacggtgtgg ccgaagggaa ggaacgtgta
    11641 gaccgcgatg gtgagggccg agcgcgccca aggcagtccg ataatggtga tcgccatgat
    11701 cacggcggcg aggagccaac ctgcggccat ccatagcccg ccgaacacga tccagagaac
    11761 gttcagaacc aggctcgtcg gtgacatgtc cttcccctca ttctctcgtc ttcgcaaatg
    11821 gtgcggcgct tgcggaattg gcaagggcgc ccgcctgaaa tttcgcccct acggtttggc
    11881 ggcaatgtgc tgctgcaact ccatcaggag cggccgctga taagcgagaa tctttaccat
    11941 cgcagccgcc gtcgcgaacc agccgatgcg gtcgatctcg gggaaagcct gccgccggcc
    12001 tgaccttggc ggccactcga tctcgaacat gttgctggcg aagggggaga ggtcgaaatc
    12061 cgcctcgagc gcccaggcat gcaccatctt cccgctcttc tgcctgaccg gcgtcagcgc
    12121 cacaaaatca ccggccgcgg cgaggttcgt ttcttcgctg aattcgcgcc tcgccgtggc
    12181 gagaagatcg gagcctggct cggcgacgcc cttggggatg gtccacacgc cctcatcctt
    12241 ccgcgcccag aatggtccgc caggatgggc gagcaggacc tcgagaccat cccggcgccg
    12301 gaacgccagg aggccggcgc tgacttctgc gctgcgacgc attggcgcca tgcccgttaa
    12361 ggggcccgtt tagagctgcg gctctctacc gcaggccttg ccaaatgggc ggttatcggc
    12421 tgttgtccgg atgactttgt cacgattacg ccaacaatgc gggcttcctc gccgcgtgcc
    12481 tttcgagcgc gccggggcca cagaactaat cctgcacggg agctgacacc aatgcgatat
    12541 cgcttcatcg ccgcgcttgc cgctttcgcg gcgctgcttg cgccgctcgc caaggctgac
    12601 gacgccccca aggacgtcaa gggcctctat ctcatgagcg actatccggc ggtcaccgtg
    12661 cggccaggcg aaacgtcggc gatcaatcta cgtttgcata actacggttt gccgcccgag
    12721 cgggtaaatc tgtctgtctc cggcgtgccc gcgggctgga cggcaacgct gatgggcggc
    12781 ggccagccgg tcgcggcggc gatgccggca accaacgccg gcgtttcgct cgaattgcgg
    12841 ctcgacgtgc cgaagaatgc agccgtcggc acgcagacgc tcacggtcgc ggcgtccgga
    12901 gattcgacca aggcggagct gccggtcgca atcacgctgg ccaaggattt gccggccaag
    12961 ctcacgttga cgccgcagct tcccgaattg cgcggcacgt cgaagtcaag cttcgagttt
    13021 cagctcgcca tcaagaacga cagcggcaag aagctcacgg tgagccttgc cgcccaggcg
    13081 ccgcagaatt tcgacgccac gttcaccgag cagtacggca gccaggagct caacgccgtt
    13141 ccggtcgatg ccggccagac caaggacgtg aagctgaaag tgcgcccgcc gaacacggct
    13201 gcggccggaa gctacaaggt catggcacgg gttggcgctg aagacgcgac cgcgacggcc
    13261 gagctcatca tggacatcac cggacagccg aagctcgaca tcagcggccg cgaaggtctg
    13321 gtgtcgatgc gcgcttcggc cggtaaggag agttcggtgc cggtggtgat caccaatacc
    13381 gggactgcgc cggcggacga ggtggagctc agcggctcgg cgccgggcgg ctggaagatc
    13441 acgttcgagc cgaagtcgat cgagcgcatc gccccgaacg agaccaagga ggtgcaggcg
    13501 ctgatcacac ccacggagaa ggcgatcgcc ggcgactacg tgacgacggt ccgcgcttcg
    13561 gcgcgcggcg aatccgcctc cgccaccttc cgggtcacgg tcacgacttc gactatgtgg
    13621 ggtatggccg gcgtcggcat catcggcgtg gcgctcctgg tcatggtcgg ggcggtcgcg
    13681 aggttcggcc ggcgatgagc ggggacatcg tcatcgaggc ccacggcctc accaagacct
    13741 atggccgcgc gaccgcggtc gatcacatct cgttcagcgt cgaacgcggg gaagtgttcg
    13801 ggctcctcgg gcccaatggc gcggggaaga cgaccaccat cctgatgctg ctcggattga
    13861 ccgaaatatc cggcggcgac gtgcgcgtgc tcgggttcaa tccggcgcgc gagccgcttt
    13921 cggtcaagcg ccgcgtcggc tatctgcccg acacggtcgg cttctacgat cagctcaccg
    13981 ccgccgacaa tctgcgctac accgcgcggc tgatcggctt caaggcgatc gaccgcgaga
    14041 agagaatcgc ggccgcgctc gaccaggtcg ggctctcgga cttcgcggac aaaggcgtcg
    14101 gcaccttttc gcgcggcatg cgtcagcggc tcgggctcgc cgagatcctc atgaaaggcg
    14161 cgcagatcgc catcctcgac gagccgacat cagggctcga tccgcatgcc acaagcgaac
    14221 tcctcgccat catccgcggc ttcaaggcgg aaggcgtgtc ggtcctgctc tcctcgcacc
    14281 tgttggagcg ggtgcagagc gtgtgcgatc gggtcgcctt gttcagcggc gggcgcattg
    14341 cgctcatggg cacggtcgcc gagctcggcc gcgcggtgct cggcggcggt ttcgtggtcg
    14401 acatcgaggc ggagggcgcc gggctcgccg agcggctcgc gctcattccc ggtgtcagcg
    14461 gggttgagaa gaccgggatc gccaagctgc gcctgcatgc ggaccgtgac gtgcgccccg
    14521 aggctgcggc cgaggtggtg gcgatgcagg ggcgcctcaa atatctcggc gtccaggagc
    14581 cgaacctcga cgccatctac acgcgctact tcgccacccg gcccgacgag gaaatgccca
    14641 tgaaggaagg aacgctgcat gcggcgtgaa ggctcggcct ttcagggtct cggcgtggtt
    14701 acgctcaagg agctggcgga ccacctgacc agcattcgtc tgttcgtgtt ggaactgctc
    14761 gttatggtaa ttgcgctagt cactgtttac ctcgcgacgg agcagattag ggagacgacc
    14821 gccgaagacc cgttcctatt tttgaagttg ttcacgacca cccgcgagca atcgccattt
    14881 tcatttctct tctttctctc attcttggtg ccgctgatgg caattggtct gggttttgac
    14941 tccgtcaata gcgagtacaa tcaacgtacg ctctcgcgca ttctatcgca gccgatttat
    15001 cgcgatgcac tgttattcgg caaatttctg ggcgcgctgg tgacgctggc aatagcactt
    15061 attgtgcttt ggctctcagt aattggcctc ggtcttcttt tcatcggcat tcctccggga
    15121 ggggaggaag tagcgcgcat ttttgtcttc ctcctggtta caatcgttta tgccggcgta
    15181 tggctggcgc tcgcgctgtt gctctcgatt ctgttccgct ccgccgcaac cgcggctctc
    15241 acttgcctcg gcctttggct gttcctctac gtcatctggc cgatgctagc tggccaaatc
    15301 gcgcagatta ttgtgccgcc ggacccacgc tatacggcgc tcggattgca gacgcccggt
    15361 accgcagtgc tggagcagat tttgtcacgg ttgtcgccgt cgacgctgtt cggcgaggtg
    15421 gtcgtggcgc tgctcgatcc gaccacgcgc tcattgggac cgatctacct cagccagatg
    15481 cagggcgctg tgcttggcgc gccgctgccg atcgccgaga gcatgctgat cgcgtggccg
    15541 cagacggtcg gcatggtcgc aaccgccatc ctcctcttcg tcatcggcta tgtgattttc
    15601 cagcggcagg aagtgcgcgc ctgaccgcgc gtccgatttt ccgcgcgcga caatgaaaac
    15661 gagggcggcc cgtggccgcc ctcgttcatt ttgcgggtct cctggaaggc tagaccggca
    15721 gaaccgcgac gatcctcagg tcgcgcggat cgacgatgac cagttcatcc tcgtagatga
    15781 agtagaggaa accgcgccat gtcggctcga tatccacgag catccgcggc accgggacga
    15841 tgtggatgcg gccgcgtgga atgaccgtcc ccaccgccag gtcgaagtcg acgtggctga
    15901 cccgcggcgc gccgtgcgcg ccgatgaccg tttgccggag cttcgtgcgc tgttcgtccg
    15961 agagggtcac atgggaggca ttgccctgca ggccctgcaa gccgttgcgc cccgtccggt
    16021 gttcggtgac ggtggtgccg gtggtgcgcg tgcctcgtgt ggtcacgctt cctttttgct
    16081 cggtctgagc ggttccgctc cgttcaaggt tgcccttctt gccacggttg atctgctcgg
    16141 cctgctgtcc cgtcgtggtc gggctcacgc cctttgacga cgtggattgg ccgaagcgct
    16201 ccatgccctt ggtgggctgt tgggcggtcg attttccacg tggggtcggc tgctccatgc
    16261 ccatcttgtg cccgctcggc tgggcgttct gacccatgtg gctcgcgccc gtcttctgct
    16321 gcgcgctcgg ggccgcgccg ctcttcatcg gttgcgcgga ggtctgaggt tgcttggcgg
    16381 gcttctgctc ctcggccgag gcaaaaccgg tcccggccat cagcgcgagg gcggcgacac
    16441 cggcgagtaa cgtctttgtt tgcatcttca ttcagcatct cctttacgtt tcgcacccgt
    16501 gccttgcggt cctttgaacg aacgcttgct cgacgcgaaa gtttcggttc cgtgtgatat
    16561 tttgcggttc cgcaccgcta ctgcgcgccg ctgcaaatag ggggttccgt gaccgcaatt
    16621 gtgtcgaccg tcgataccgc atcgcgagag ttccgcacca acgagacggc gatgcgcgat
    16681 ttgatcgagg aactgcaaca gcgccgcacc aaagcagccg agggcgggcc atcccgggct
    16741 cgcgaacggt acctttcccg cggcaaactc ttgccgcgcg accgcgtgat gacgctgatc
    16801 gatccgggag cgccgttcct ggaattgtcg ccgctcgccg ccgacggcat gtacggcgag
    16861 cctgttcacg ccgccggcat catcactggt atcgggcgca tcgccgggcg cgaatgcgta
    16921 gtcgtgtgca acgactccac gatcaagggc ggcacctact atccgctgac ggtaaagaag
    16981 cacctgcgcg cccaggagat cgcgcgcgag aaccggctgc cgtgcatcta cctcgtcgat
    17041 tcgggcggcg cgaacctgcc gcactggacc gaggtcttcc ccgaccgcga gcattttggc
    17101 cgcatcttct tcaatcaggc gaccctgtcg gcagccggca tcccgcagat tgcggtcgtc
    17161 atgggctcct gcaccgccgg cggcgcctac ctgccggcga tgtctgacga aaccatcatc
    17221 gtgcgcaacc agggcacgat cttcctcggc gggccgccgc tggtgaaggc ggcgaccggc
    17281 gaagtggtct ccgcggaaga gctcggcggc gccgacgtgc acgcgaaaag atccggcgtc
    17341 gccgactact acgccgagaa tgaccgccac gcgctcgcgc tctgccggcg cattgtcggc
    17401 accttgaaca cccgcaaatc gatcgatatt ccgctcgcga agcccgccga accgaaatac
    17461 gacgcgcgcg agctcgacgg catcgtgccg gtcgatctca agaagcaata cgacgtgcgc
    17521 gaggtgatcg cgcgcgtcgt ggacggctcc gagttcgacg agttcaaggc gctctacggc
    17581 accacgctgg tcaccgggtt tgcccacatc cacggcattc cggtcggcat cctcggcaac
    17641 aacggcatcc tgttttcgga gagcgcgctc aaggccgcgc acttcatcga actgtgctgc
    17701 cagcgccggg tgccgctcct gttcctgcag aacatcgtcg gcttcatggt cggccgcgac
    17761 tacgaggccg gcggcatcgc caaggacggc gccaagatgg tcaccgccgt cgcttgcgcg
    17821 caggtgccga agatcaccgt cgtgatcggc ggctcctacg gcgccggcaa ttacggcatg
    17881 tgtggccgcg cctacagccc gcgtttcctg ttcacctggc cgaatgcgcg catctcggtg
    17941 atgggtggcg agcaggcggc aagcgtgctg gcgacggtgc ggcgcgacaa tctcgaggcc
    18001 gccggtaaaa gctggtcgga agtcgaggag gaggaattca agcagccgat ccgcgatcaa
    18061 tatgaagcgg aaggcaaccc ctactacgcc accgcgcggc tatgggacga cggcatcatt
    18121 accccgtccg agacgcgccg ggtgctggca ttgtgctttt cggcggcgct caacgcgccg
    18181 atcccggaga cgaagttcgg ggtgttcagg atgtgaaacg tcttacagcg agtgacgtgc
    18241 gtcggctggc gccaacgcac gtcgaggagt ctctacaatc cttcggcaaa gtctagcgac
    18301 actgatagac ccattggcca ttgccgggct gcctctggcg gtaggcgttc acccgcacgt
    18361 agccgcaatt catctcagag taagccggaa agttccaagt cccgtactgc ggccaatttg
    18421 caccgccacc gcgccccgcc ggcgctcgcg gcggtcggca tcagggcggt tgcagcgatg
    18481 acggcggtgg cggccaagcc ggcgatggcg aatttgggca acatagctct cctcctcctc
    18541 tgcacatcgg ttgctgccga tgcatgtatg gggaaatggg tcgcccctcg tcgttgtcaa
    18601 gccgacgtca cgtccgctcg gagcaggtga taagtcagcc aaaaaggaaa gcaacgcatg
    18661 cgcaaaacca tcacgcatat ccattggccg gatgcgcctg atctgtggat gccgtatgca
    18721 ccggcgatca aggtctcggg tgggacgacg gtctatcttg ccggcgtcac cgccgcgccg
    18781 gtctatcatc atcatccgca tcggccgcag gagttcgacg ccatgccgcg cgacatgggc
    18841 gggcaggcgc gcgcggcgct cgaaaatctc aagcgcgggc tccaagcagc aggcgcgagc
    18901 ttcgccgacg tggtgaccgc gacccggttc gtcaccgatc tttccgatca ggacgcgctc
    18961 aaccgcgttt gggcagaata ttttggcgat gccaagccgg cgacgacgac cgtccaggtg
    19021 gtagcctcgc caccgatccg cgttgccttg tcgaaataaa cgcggtcgcg gtggtcgatt
    19081 gagcgatcgg cggtcgggcg cgaagctcct tagcggttga acagcctgaa cagggcgctg
    19141 agcgcgatgc tgacaaggag gcacgtgacc agcgggaagt agaacgacgt gttgccgcgg
    19201 tggatcacga cgtcgccggg cagccggcgg agtccgctgc gcgacaagat cggccacgcg
    19261 atcccggcca tcaagatcag gagcccaagc gcgatcagga ggcgctgcac gttcatcgcc
    19321 gcaagacgtg gggaagtgaa agcgagcgat caagggtctc ggcgcgcgca ggctctactg
    19381 cgttcgcgcc gccgcgccgc accgcttgac gcggcggcgt tttcggccct cttgtcggcg
    19441 tccaacagtc tacacgaagg gtgggagtga agggcggaga gtcatgaccg agctatccta
    19501 ccggacggta ctcattgtcg gcgtcggcgc gggcctttcc gcttcgctgg cgcgcacgtt
    19561 cacgaaggcc ggcatgcggg tcgcgctcgc cgcgcgccgt gcgggcgaac tgtccggtct
    19621 tgccaaggag gtcggcggcc gagcgttcgc gtgcgacgcg accagacacg cggaggtcgc
    19681 caagcttttc ggcgaggtcg aagccgcgtt cgccgcgccg gacgtcgtcg tctacaacgc
    19741 cagctaccgc acgcg
//
LOCUS       DATMQB010000035         4486 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3420780, whole genome shotgun sequence.
ACCESSION   DATMQB010000035 DATMQB010000000
VERSION     DATMQB010000035.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4486)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4486)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4486
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3420780"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /locus_tag="VNY79_01305"
     CDS             <1..426
                     /locus_tag="VNY79_01305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71114.1"
                     /translation="SGRSVLLMGGEELVSTRMYTGWRTLWPGLAKNLVDTLGGPAATL
                     SMALAGVMLAWAAPVIPLLGVAGWVQGVAGAPSALALALLGSGAAFGLHIAATFYFRI
                     PFWYGLLFPLGYTAGALMAFDSVRRRLSGRVSWKGRIYS"
     gene            423..1508
                     /locus_tag="VNY79_01310"
     CDS             423..1508
                     /locus_tag="VNY79_01310"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HWX71115.1"
                     /translation="MKAAKRKNEEARPAERNRVPRALDSGETRAIMLAAAFLFVFLYF
                     IRLILLPFVLAAIVAYVCTPLLDWAARRTRWPRLLFAITLFVLLLGAAGLVVTFAAGR
                     VVDEVRGIATDLQEMLERFTSEAIGDHPIRVLGRPIDAHEIAQSAVDRIRDWIGSDQI
                     VAIAGYSIAGIMGLFMTAVLLFYFLASGPRVARGLFWIVPPHRRPLVASIWKHLDPVL
                     FRYFLGVLAVVVYATIAAYIGLGVILGIHHALLLALLTGVLETVPVIGPTSAAVIAGL
                     ISLRTATGIGSILAYAAYATALRLSIDQLFGPIVLGRAAHVHPALIIFCFLAGGVVLG
                     IPGVILAVPVALLVKSTLATLYGDEAT"
     gene            1825..2307
                     /locus_tag="VNY79_01315"
     CDS             1825..2307
                     /locus_tag="VNY79_01315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71116.1"
                     /translation="MRDGTRLQRGERIARLHFWNEHVPPVPQDGATIAWARQMQHAIA
                     ISLQELACYLKSHPDLADIGAICADVPSGTQTQCDQLARIMARFGFEAIVHPERLPMA
                     ERLHRFGENVLISLIVFAQNASTLRRDTLRRVRVPIYLSRRTLDGKFGHVGRAGLGAG
                     "
     gene            2313..3491
                     /gene="hpnI"
                     /locus_tag="VNY79_01320"
     CDS             2313..3491
                     /gene="hpnI"
                     /locus_tag="VNY79_01320"
                     /inference="COORDINATES: protein motif:HMM:TIGR03472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriohopanetetrol glucosamine biosynthesis
                     glycosyltransferase HpnI"
                     /protein_id="HWX71117.1"
                     /translation="MSISADVPGLASLLLSLGSICLAVAFVGCIFTLVEAAFVVGFSD
                     KEPARTDAEPAVTVLKPLHGAEPDLAGRLAAVCRQHYGGPVQVVCGAQGDLAPATAAV
                     GEVNSKFPDSIELVADQRSHGANGKVSNLINMLPRARYDTIVLSDSDIVVERDYLRRI
                     VALLGEPDVGAVTCLYHGIGGTGLWSRISALATNSHFLPQAITALGLKLGKPCCGATI
                     ALRRSMLDRIGGFHAFADVLADDYAIGVAVRAAGYDVKAAPFLVGHRCFEGSLREFMR
                     HQIRVARTIRSIDPIGYAGTILTHPLPLALLGMLSGGITATLLTVAVLASRVTLCRCV
                     ERRFGLPRQSYWLIPLQDVLVFGVYVASFFGATVNWQGVDFRVAGDGTLIEEQDLRGS
                     "
     gene            3491..>4486
                     /locus_tag="VNY79_01325"
     CDS             3491..>4486
                     /locus_tag="VNY79_01325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HWX71118.1"
                     /translation="MRTLFLQAPSFDGFDGGAGARYQARREIRSYWYPTWLAQVAACV
                     PDSKLIDAVPHRLPLADLVRDARNYDLAVLHTSTPSFASDVAVVEALKSANPRLKAGF
                     VGAKVAVAPQASLEQSEAVDFVAGNEFDFTIREVAEGRDWRSIAGLSYRDDAGAIRHN
                     PPRAVLENMDELPFVTPVYKRDLKIENYFIGYLKHPYVSLYTGRGCKSRCTFCLWPQT
                     VGGHRYRTRSVGHVVEEIRWAKAALPQVKEFFFDDDTFTDDRPRTEAIARELGKLGVT
                     WSCNAKANVPRATLEVLRDNGLRLLLVGYETGNQQILNNIKKGMRIDVARRFTKDC"
BASE COUNT          655 a         1489 c         1468 g          874 t
ORIGIN      
        1 tccggacgat ccgtcctgct catgggcggc gaagaactcg tctccacgcg catgtatacc
       61 ggctggcgga cgctctggcc gggcctcgcc aagaatctcg tcgataccct cggcggcccg
      121 gccgcgacct tgtcgatggc cctcgccggc gtgatgctgg cgtgggcagc gccggtgatc
      181 ccgctcctgg gtgtcgccgg ctgggtgcag ggcgtggcgg gtgcgccgtc ggcgctggcg
      241 ctcgcgctgc tcgggtcggg cgccgcgttc ggactgcaca tcgcggcgac attctatttt
      301 cgcattcctt tctggtacgg tctcctgttt ccgctcggct acacggcggg cgcgctcatg
      361 gcgttcgaca gcgtgcgccg acgtctcagc ggccgggtga gctggaaggg ccggatctat
      421 tcatgaaggc tgccaagcgg aaaaacgagg aggcgcggcc agccgaacga aaccgcgtcc
      481 ctcgcgccct cgattcgggc gagacgcgcg ccatcatgct cgcggccgcc tttctcttcg
      541 tctttctcta tttcatccgg ctcattctgc tgccgttcgt gctggccgcc atcgtcgcct
      601 atgtctgcac ccccctgttg gattgggccg cgcggcgcac gcggtggccg cgattgctgt
      661 ttgctatcac cttgttcgtc ctgcttctcg gcgccgccgg gctggtcgtg accttcgccg
      721 ccggacgcgt tgtcgacgag gtgcggggga tcgcgacgga cctgcaggag atgctggagc
      781 gcttcaccag cgaggcgatc ggcgaccatc caatccgcgt gctcgggcgg ccgatcgacg
      841 ctcatgagat cgcccagtcg gcggtcgatc gcatccgcga ttggatcggg tcggatcaga
      901 tcgtggccat tgccgggtac agcattgcgg gaatcatggg actgttcatg accgcggtgc
      961 tgctgtttta tttcctggcg agcggcccac gcgtggcgcg cggcctgttc tggatcgtgc
     1021 cgccgcatcg ccggccgctg gtggccagca tctggaagca tctcgacccg gtgctgttcc
     1081 gctattttct cggcgtgctc gccgtcgtcg tctacgccac catcgcggcg tatatcgggc
     1141 tcggcgtcat tctcggcatc caccacgcgc tgctgctcgc cctgctgacc ggagttctcg
     1201 agaccgtccc ggtgatcggt ccgacctcgg cggcggtgat cgccggcctg atctcgctgc
     1261 gcacggcgac cggaatcggc agcatcctcg cttatgccgc ctatgcgact gcgctgcggc
     1321 tgtcgatcga ccagctcttc ggccccatcg tgctcggccg cgcggcgcac gtgcacccgg
     1381 cgctcatcat cttctgcttc ctcgccggcg gcgtggtgct cggcatcccg ggcgtcatac
     1441 tcgccgtgcc ggtcgccctg ctggtcaaga gcacgctcgc gacgctctat ggcgacgagg
     1501 cgacgtaagc gcgctgtttg catcgcgcca tgtcgtcgtt tcccccttgg cggaaattcg
     1561 gctatattgt gacagtgtgc ggcaactttc tgggaacccg gaggttgccc aggatctggg
     1621 gaaggaccgc ggggacccgc tcacatggcg gtgtgggatt ccgccaggcc aaggtcgcag
     1681 gagccgtaca gccatccgtg gctggcggac gtcctttttg cacttgatgg acgcctgcag
     1741 cgccgttacg cggtgttcga atacaccggc aacccggtct gcattttccg cgtcgatatc
     1801 gcctgttcgc ccgagcgtct cgccttgcgc gacggcacgc gcctgcagcg gggcgagcgg
     1861 atcgcgcgac tgcatttctg gaacgagcat gtgcccccgg tgccgcagga cggagcaacg
     1921 atcgcctggg cacggcagat gcagcatgcg atcgcgattt cgctgcagga gcttgcgtgc
     1981 taccttaagt cgcatcccga tctggcagac atcggggcga tctgcgccga cgtgccttcc
     2041 ggcacccaaa cgcagtgcga ccagcttgcc cggatcatgg cgcgcttcgg ctttgaagcg
     2101 atcgtccacc cggaacggct gccgatggcg gagcgcctgc accgattcgg cgaaaacgtg
     2161 ctgatttcgc tgatcgtgtt tgcgcagaat gccagtacac ttcgtcgcga cacgctcagg
     2221 cgcgtgcgag tgccgatcta tctctcgcgc cgaacgctgg acgggaaatt cggccatgtc
     2281 ggccgagcgg ggttgggggc gggctagggt ttatgagtat ttcagcggac gtgccgggcc
     2341 tggcgtcgtt gttgctgtcg ctcggcagca tctgccttgc cgtcgctttc gtcggctgca
     2401 tctttacgct agtggaggct gcgttcgttg tcggcttttc cgacaaggag ccggcgcgca
     2461 ccgacgcgga gcccgcggtg acggtgctga agccattgca tggcgcggag cccgatctcg
     2521 ccggccgcct cgccgccgtc tgccggcagc actatggcgg tccggtgcag gtcgtatgcg
     2581 gcgcgcaggg cgacctggcg ccggccaccg ccgccgttgg cgaggtcaac tcgaaattcc
     2641 ccgacagcat cgagcttgtc gccgatcagc gcagtcatgg cgccaacggc aaggtatcga
     2701 acctgatcaa tatgctgccg cgcgcccgtt acgacaccat cgtgctctcc gacagcgata
     2761 tcgtcgtcga gcgcgactac ctgcgccgta tcgtggcgct cttgggcgaa cccgatgtcg
     2821 gtgccgtcac ctgcctctac cacggcatag gcgggaccgg cctgtggtca cgcatatcgg
     2881 cgctggcgac gaactcgcat ttcctgccgc aggcgatcac cgcgctcggc ctgaagctgg
     2941 gcaaaccatg ctgcggcgcc accatcgctt tgcgccgctc gatgctcgac cgcatcggcg
     3001 gcttccacgc cttcgccgac gtactggccg acgattatgc gatcggcgtc gccgttcgag
     3061 cagccggcta cgacgtcaag gcggcgccgt tcctggtcgg ccaccgctgt ttcgaaggca
     3121 gcttgcgcga attcatgcgg caccagatcc gggtggcgcg caccatcagg agcatcgacc
     3181 cgatcggcta cgccggcacc atcttgaccc acccgttgcc gcttgctctt ctcggcatgc
     3241 tttccggcgg catcaccgcg acgctgttga ccgttgcggt gctggcgtcg cgggtgacgc
     3301 tttgccgctg cgtcgaacgg cgtttcggac tgccgcggca gagctactgg ctcatcccgc
     3361 tgcaggatgt cctggtgttc ggcgtctacg tcgcaagctt cttcggggcg acggttaact
     3421 ggcaaggggt ggacttccgc gtggcggggg acggcaccct gattgaggaa caggacctga
     3481 ggggctcgtg atgcgaacat tgtttctgca ggcgccttcg ttcgacggat tcgacggcgg
     3541 cgccggcgcg cgctaccagg cgcgccgcga aatccgctcc tactggtacc cgacctggct
     3601 cgcgcaggtc gcggcttgcg tcccggacag caagctcatc gacgcggtgc cgcatcggct
     3661 cccgctggcc gacctggtgc gcgacgcacg caactatgac ctcgcggtat tgcatacgtc
     3721 gacgccttcg ttcgcgtccg acgtcgcggt cgtcgaagcg ctgaagtcgg cgaatccgcg
     3781 cctgaaggcc ggtttcgtcg gggcgaaggt cgcggtcgcg ccgcaggcga gcctcgagca
     3841 atcggaggcc gtcgacttcg tcgccggcaa cgagttcgac ttcaccatca gggaagtcgc
     3901 cgaggggcgc gattggcgca gcattgccgg actgtcatac cgcgacgatg ccggtgcgat
     3961 caggcacaac ccgccgcgtg ccgtgctgga aaacatggac gaattgccct tcgtcacgcc
     4021 ggtctacaag cgcgacctca agatcgagaa ctatttcatc ggctatctga agcatcccta
     4081 tgtgtcgctc tatacgggac gcggctgcaa gtcgcgctgc actttctgcc tgtggccgca
     4141 gaccgtcggc ggccatcgct accgtacgcg cagcgtcggc cacgtggtgg aggagatccg
     4201 ctgggccaag gcggcgcttc cgcaggtcaa ggagttcttc ttcgacgacg acaccttcac
     4261 cgacgaccgg ccgcgcaccg aagcgatcgc ccgcgaactc ggcaagctcg gcgtcacctg
     4321 gtcatgcaac gccaaggcca acgtgccgcg cgcgacattg gaggtgttgc gcgacaatgg
     4381 gttgcgtctg ctgctcgtcg gctatgaaac cgggaaccag cagatcctca acaacatcaa
     4441 gaagggcatg cggatcgacg tcgcccgccg cttcaccaag gattgt
//
LOCUS       DATMQB010000036         2830 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_628634, whole genome shotgun sequence.
ACCESSION   DATMQB010000036 DATMQB010000000
VERSION     DATMQB010000036.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2830)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2830)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2830
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_628634"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..834)
                     /locus_tag="VNY79_01330"
     CDS             complement(<1..834)
                     /locus_tag="VNY79_01330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71119.1"
                     /translation="MTAIRLMVAFAVIGVIAGEALAARPTGPIPLPRPRPALKTDKLA
                     SFSGHAAVGRNAATPLALAPQTLRGGITASIPQTGSFRQATFEPMNASAQRPPGPSRP
                     SARSAHASVPLAMATSSNTSPLDLSAVKQAIDLVRKSRLDEATSAEGTVADPLARKVI
                     EWVILRSDTDVDFSRYVAFLAANPSWPGLVALRRRAEAALWQQRPDPQAVIAFFASER
                     PHSAKGRFALARALLAQGDQAAAQAAMREAWRYDSFSADLEGQARAAFSGLITAADDK
                     VR"
     gene            1090..1980
                     /gene="dapA"
                     /locus_tag="VNY79_01335"
     CDS             1090..1980
                     /gene="dapA"
                     /locus_tag="VNY79_01335"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008840 - 4-hydroxy-tetrahydrodipicolinate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HWX71120.1"
                     /translation="MTAKTSFRGSFTALVTPFKNGSVDEKAFRSLVDWQIAEGTNGLV
                     PVGTTGESPTLSHEEHGEVVEWCVEQAKGRVPVVAGAGSNSTKEAIGLAQHAEKTGAD
                     AVLVVTPYYNKPTQEGLYQHFKAINDAIGIPIIIYNIPPRSVIDMSVDTMTRLFELKN
                     IAGVKDATANVVRVSQQRAAMGEGFNQLSGEDATALGFMAHGGHGCISVTANVAPRLC
                     AEFQASCLKGDYAGALTLQDKLMPLHTALFIETNPAPAKYALSLLGKCADTLRLPMVP
                     LAERTRVAVREAMVHAGLIN"
     gene            2091..2498
                     /gene="mscL"
                     /locus_tag="VNY79_01340"
     CDS             2091..2498
                     /gene="mscL"
                     /locus_tag="VNY79_01340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008381 - mechanosensitive monoatomic ion
                     channel activity [Evidence IEA];
                     GO_process: GO:0034220 - monoatomic ion transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HWX71121.1"
                     /translation="MLEEFKKFALRGNVLDLAVGVIIGVAFNSIVQSLVGDIIMPLIG
                     AVTGGLDFSNYFLPLSSKVTAADLADAKKQGAVMAWGSFLTIMLNFIIVAWVLFRLMR
                     VVNRLVATEPPKAPPVTRQEQLLTEIRDLLKNR"
     gene            2498..>2830
                     /gene="smpB"
                     /locus_tag="VNY79_01345"
     CDS             2498..>2830
                     /gene="smpB"
                     /locus_tag="VNY79_01345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HWX71122.1"
                     /translation="MAAGATAKAERKLRVVADNRKARFNYFIDETLEAGVALTGTEVK
                     SLRQGKATIGESYADTRGGEIWLINSNIPEYQQANRFNHAPKRPRKLLLHRSQINKLI
                     GAVEREGMT"
BASE COUNT          503 a          936 c          944 g          447 t
ORIGIN      
        1 ccgcaccttg tcgtcggccg cagtgatcag accggagaac gcggcgcggg cctgcccttc
       61 aaggtctgcg gaaaaactgt cgtagcgcca cgcttcgcgc attgccgcct gcgcggcggc
      121 ctggtcgccc tgtgcgagca gtgcgcgcgc gagcgcaaat cggcccttgg cgctgtgcgg
      181 ccgctcgcta gcgaagaagg cgatgaccgc ctgcggatcg gggcgctgct gccacagcgc
      241 cgcctcggcg cggcgccgca gcgcaacgag gcccggccag ctcggattgg cggcaaggaa
      301 cgcgacgtag cgggagaaat ccacgtcggt gtcgctgcgc aggatcaccc attcgatcac
      361 cttgcgcgcg agcgggtcgg cgacggtacc ttcggcgctc gtcgcctcgt cgagccgcga
      421 cttgcgcacg aggtcgatcg cctgcttgac cgcggaaaga tcgagtggcg aggtgttcga
      481 cgacgtcgcc atcgccagcg ggacggaggc gtgcgcggag cgcgcggacg gccgggatgg
      541 tccaggcggc cgctgggctg aggcgttcat gggctcgaag gtcgcctgtc ggaagctgcc
      601 ggtctgcgga atcgaggccg tgatgccgcc tcgcagcgtt tgcggcgcga gcgccagcgg
      661 cgtagccgcg ttcctgccga cggcggcgtg accggaaaag cttgccagct tgtcggtctt
      721 gagcgccggg cgcggacgcg gcaacgggat cggccctgtc ggtcgcgcgg ccagggcttc
      781 gcctgcgatg acgccgatga ctgcgaaagc gaccatgagc cgaatggcag tcatcacccc
      841 tttgggtcct cccgtcacgg cgcgcgccgg cggcgcattc gcaaaacctc ttcgccctgc
      901 aacatttaag aaattctaat gcctgcacgc cggagccagg gttggcgcat ttcacggcaa
      961 aagcggggcg tgatctccac ctgagtcgca aagctctttc aagtgcggct gcgacccgat
     1021 aatttatcgt gagggcatca gggccgcgca ggccggcgcg cccggccggg aaccaatcga
     1081 ggacctgtca tgaccgccaa gacgagcttc cgaggctcat tcactgcgct ggtcacgccg
     1141 ttcaagaacg gttccgtgga cgaaaaagcc tttcgcagcc tcgtcgactg gcagatcgcc
     1201 gagggtacca acgggctggt tccggtcggc accacgggcg agagcccgac actctcccat
     1261 gaggagcacg gcgaggtggt ggagtggtgc gtcgagcagg cgaagggccg cgtgccggtg
     1321 gtcgccggcg ccggctcaaa ttcgacgaag gaggcgatcg ggcttgccca gcacgcggaa
     1381 aagaccggcg ccgatgccgt gctcgtggtc acgccctact acaacaagcc gacgcaggaa
     1441 ggcctttatc agcacttcaa ggcgatcaac gacgcgatcg gcattcccat catcatctac
     1501 aacatcccgc cgcgctcggt catcgacatg tcggtcgaca ccatgacgcg cctgttcgag
     1561 ctgaagaaca ttgccggcgt gaaggacgcg acggccaacg tggtgcgcgt ctcgcagcag
     1621 cgggcggcca tgggcgaggg cttcaaccag ctctccggcg aggatgcgac cgcgctcggt
     1681 tttatggccc atggcggcca cggctgcatc tccgtcaccg cgaacgtggc gccgcggctg
     1741 tgcgccgagt tccaggcctc gtgcctcaaa ggtgactatg ccggtgcgct cacgctccag
     1801 gacaagctga tgccgctgca cacggcgctg ttcatcgaga ccaacccggc gccggcgaaa
     1861 tatgcgttgt cgctgctcgg caagtgcgcc gacacattgc ggctgcccat ggtgccgctc
     1921 gcggaaagga cgcgggtggc ggtgcgcgag gccatggtgc acgccgggct gatcaattaa
     1981 gggcgttacg ctccactcat tcccgcgcga gcgggagcga gcggagcagg ctcggtcccc
     2041 gcgcgcgggg cgatgagcgg aactcgaacg acagaactcc ggagccgtcg atgctcgagg
     2101 aattcaagaa gttcgccttg cgcggcaacg tcctcgatct cgccgtcggc gtcatcatcg
     2161 gcgtcgcctt caacagcatc gtgcagtccc tcgtcggcga cattatcatg ccgctcatcg
     2221 gcgccgtcac cggcgggctc gacttctcca actatttcct gccgctgtcc tccaaggtga
     2281 cggcggcgga tctcgcggat gccaagaagc aaggcgcggt gatggcttgg ggcagtttcc
     2341 tcaccatcat gcttaacttc atcatcgtcg cctgggtgct gttccggctc atgcgcgtcg
     2401 tcaaccggct ggtggccacg gagccgccca aggcgccgcc ggtcaccagg caggagcagc
     2461 tcctcactga gatccgcgac ctcctgaaga accgctgatg gcggcaggag ccacggcgaa
     2521 ggcggaacgg aagctgcggg tcgtcgccga caaccgcaag gcccgcttca actacttcat
     2581 cgacgagacg ctcgaagccg gggtcgcact caccggcacg gaagtgaaat cgctgcgcca
     2641 gggcaaggcg acgatcggcg aatcctatgc cgacacccgc ggcggcgaga tctggctcat
     2701 caactccaac attcccgaat accagcaggc caaccgcttc aaccacgccc ccaagcgccc
     2761 gcgcaagctt ttgctccacc ggagccagat caacaagctc atcggcgcgg tcgagcgcga
     2821 gggcatgacg
//
LOCUS       DATMQB010000037         2275 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1558938, whole genome shotgun sequence.
ACCESSION   DATMQB010000037 DATMQB010000000
VERSION     DATMQB010000037.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2275)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2275)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2275
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1558938"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..336)
                     /locus_tag="VNY79_01350"
     CDS             complement(<1..336)
                     /locus_tag="VNY79_01350"
                     /inference="COORDINATES: protein motif:HMM:NF012656.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX71123.1"
                     /translation="MRPLVLLNGHRHFNEVFFEDVSVPKENLVGPLNEGWKVAITTLM
                     FERSGAGGRDHAAQIARLVELAKQFPNRQEPAWRESHIRQQLAQLAIETKALQVTRLR
                     GLTRRLRGEP"
     gene            complement(293..946)
                     /locus_tag="VNY79_01355"
     CDS             complement(293..946)
                     /locus_tag="VNY79_01355"
                     /inference="COORDINATES: protein motif:HMM:NF014790.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX71124.1"
                     /translation="MDFADSPEHAAFRAEFRHWLEANLPPEICVDDAADQRVAPDRET
                     LEKRIAWQKKMHAAGWVGISWPKEYGGRGVGFMEQVIFDEEYFRARAPVLPTASALNL
                     LGPTLIHWGNEEQKRRHLPRILSADELWCQGYSEPDAGGDLASLRTRAVDNGDHFVVN
                     GQKVWTSGAHFALVLSVGAHRSRRAKASRHQLFAGRYEDARDHGAAAGPAQRPPPLQ"
     gene            complement(959..2068)
                     /locus_tag="VNY79_01360"
     CDS             complement(959..2068)
                     /locus_tag="VNY79_01360"
                     /inference="COORDINATES: protein motif:HMM:NF015056.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HWX71125.1"
                     /translation="MKSITVDYSKRLADEPGKGHNRWHEAIAPVVEAAPGEEIEIQTR
                     DAFDGQITANTTAEDLRRCDLNRVHPLTGPVFVAGAAPGDLLEVEICDMKPAAFGYTV
                     EVPGFGFLRDAFPEPYIAKWSIGDGFAESADLPGVRIPDGSFVGVIGVAPSKGLRETI
                     RRREASLLDRGGMVLPPERAGAVPAAEPIASEALRTIPPRENGGNLDIKQLSKGARLF
                     LPVFVDGALFSVGDAHFAQGDGEACGTAIEMAGAIVVRFTVHKGEADRRGIRFPRFAR
                     DDYYFPPELAAPKRFLATTGLSIREDGTNESEDATLSARNALLAMIDLLVERGWNRQQ
                     AYAICSVAVDLKLSELVDVPNMVVSAFLPLDIFGQ"
BASE COUNT          390 a          762 c          729 g          394 t
ORIGIN      
        1 cggctcgccg cgcagccggc gcgtcaggcc gcgcagcctt gtcacctgca aggccttggt
       61 ttcgatcgcg agctgcgcca attgctggcg gatatgggat tcgcgccaag ccggctcctg
      121 gcggttgggg aattgcttgg ctaattcgac gagccgggca atctgcgcgg catggtcgcg
      181 cccgccggcg ccgctgcgct cgaacatcag ggtcgtgatc gcgaccttcc acccctcgtt
      241 cagcggcccg accaagttct ccttggggac cgacacatcc tcgaaaaaga cctcattgaa
      301 gtggcggtgg ccgttgagca ggaccagcgg ccgcaccgtg atcccgggcg tcttcatatc
      361 gaccagcaaa tagctgatgc cgtgatgctt tggcgcgtcg ggatcggtgc gcaccaacag
      421 aaagcaccaa tgcgaaatgc gcgcccgacg tccacacctt ctgcccattc accacgaagt
      481 ggtcgccatt gtcgacggcg cgggtgcgca ggctcgcgag atcgccgccg gcgtcgggct
      541 cggaatagcc ctggcaccac agctcgtcgg cgctcaggat gcgcggcagg tgacgccttt
      601 tctgctcttc gttcccccaa tgaatgaggg tcggacccaa taggttcagc gcgctcgcgg
      661 tcggcagaac cggcgcacgg gcacgaaaat actcctcgtc gaagatgacc tgctccataa
      721 agccgacgcc gcggccgcca tattccttcg gccaggagat gccgacccac ccggcggcat
      781 gcattttctt ctgccacgca atgcgttttt ccagtgtctc gcggtctggc gccacgcgct
      841 ggtcggcggc atcgtcgaca cagatctcgg gcggcaggtt cgcctcgagc caatggcgga
      901 attcggcgcg gaaagctgcg tgctcggggc tgtcggcgaa gtccatgggt atcgccctct
      961 attgaccgaa gatgtcgagc ggcaggaacg cgctgaccac catgttcggg acatcgacca
     1021 gctcgctcag tttgaggtcg accgcgacgc tgcagatcgc ataggcctgc tgccggttcc
     1081 agccgcgttc caccaataga tcgatcatcg ccagcagcgc attgcgcgcg ctcaatgtcg
     1141 cgtcctcgct ttcattggtg ccgtcctcgc ggatcgacag gccagttgtg gcaaggaagc
     1201 gcttgggtgc ggcgagctcg ggcgggaaat aataatcgtc gcgcgcaaag cgcgggaagc
     1261 ggatgccgcg gcggtcggct tcgcctttgt gcaccgtgaa gcgcaccacg atcgcgccgg
     1321 ccatctcgat cgcggtgccg caagcctcgc cgtcgccttg cgcgaaatgc gcgtcgccga
     1381 ccgagaacag ggcgccgtcg acaaagaccg gcaagaacaa ccgagcgccc ttgctcagct
     1441 gcttgatgtc gagattgccg ccgttctcgc ggggcgggat cgttcgcaac gcctcggacg
     1501 cgatcggctc ggccgccggc acggcgcccg ctctttcggg cggcaatacc atcccgccgc
     1561 ggtcgagcag gctcgcttcg cgccgccgga tcgtctcgcg cagcccttta gacggcgcca
     1621 ccccgatgac cccgacgaac gacccgtcgg ggatgcgcac acctggcagg tcggccgact
     1681 cggcgaagcc gtccccgatg ctccatttgg caatgtaagg ctcggggaat gcgtcgcgca
     1741 aaaagccgaa ccccggcacc tccacggtgt agccgaacgc ggccggcttc atgtcgcaaa
     1801 tttctacctc gaggagatcg cccggcgcgg caccggcgac aaagaccggg ccggtcagcg
     1861 gatggacgcg gttgaggtcg cagcggcgca gatcctccgc ggtcgtgttt gcagtgatct
     1921 gaccgtcgaa ggcgtcgcgc gtctggatct cgatctcttc gccgggcgcc gcttcgacga
     1981 ccggcgcaat cgcctcatgc cagcgattgt ggcccttgcc cggctcgtcg gcgaggcgct
     2041 tggagtagtc gacagtgatg ctcttcatgc agccctcccg tgcaacgcga ggctagcaca
     2101 agaggtcgtc gtagcaagcg cggaccgatc tcgaagagct cacccgtacc ggtatttcgc
     2161 ctgccaatcg ccggcgccgc cgggcaacag gtcgaataga tgccagagcg cgcagaaatc
     2221 gtcgcccggg ctgaagccgg tgtccgacac ccgcaggatg cggttcgcct cacgt
//
LOCUS       DATMQB010000038         2851 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4039845, whole genome shotgun sequence.
ACCESSION   DATMQB010000038 DATMQB010000000
VERSION     DATMQB010000038.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2851)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2851)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2851
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4039845"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(119..1099)
                     /gene="rfaD"
                     /locus_tag="VNY79_01365"
     CDS             complement(119..1099)
                     /gene="rfaD"
                     /locus_tag="VNY79_01365"
                     /EC_number="5.1.3.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008712 - ADP-glyceromanno-heptose
                     6-epimerase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-glyceromanno-heptose 6-epimerase"
                     /protein_id="HWX71126.1"
                     /translation="MLLVTGAAGFIGSNVVASLNEAGRSNIVVNDVLGGEGKWRNLAS
                     RQFADFIPPADLMRWLEGRKLEAVVHLGAISSTTATDGDLVIEANFRLPLRLFEWCAS
                     ARTSFIYASSAATYGDGEAGYSDDWSRAALRRLKPMNLYGWSKHVFDLAVVERVARKD
                     KVPPQWAGLKFFNVFGPNEYHKGEMMSLVAKRFDDAKAGSAIRLFKSHRTGIADGEQR
                     RDFIYVDDAVAVVRWLLETPSVSGIFNVGSGMARSFRDLMTAMFAGLGRKPAIEYIDM
                     PVSIRDSYQYFTQAETTNLRRAGYNADFTALEEAVQRYVTGYLDRPDRYR"
     gene            1252..2367
                     /gene="waaF"
                     /locus_tag="VNY79_01370"
     CDS             1252..2367
                     /gene="waaF"
                     /locus_tag="VNY79_01370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008920 - lipopolysaccharide
                     heptosyltransferase activity [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipopolysaccharide heptosyltransferase II"
                     /protein_id="HWX71127.1"
                     /translation="MNQGSQIRANGRKVEPDSSPALIVPYMWIGDFVRCHSVVQLLRT
                     RFPERPVDMLSTTLCAPLADYMPGLRKAIVVDLPRKRLGLSHHKALGRRLQSEGYGAA
                     LIMPRKWKAALAPFFAGIPERTGFVGEARVILLNDLRFGERVLPRMVDRCAALALPRG
                     AKLPEAWPAPRLDVPAAEAAAWRAKRGLTADGRPVIALAPGAVGPSKRWPAASYAALT
                     RRLAAEGVAVWVLGGPDEKPLATEIIGDTPARDLTGPDLRDAILALASASVAVSNDSG
                     LLHVAAALGTPAIAIFGPTSPWHWAPLNPLAAAMEMVGELPCRPCHKPVCRLDHHRCM
                     RDIVPGEVLAATRRALAAVAAEDEFASRNNAAFIKSE"
     gene            2396..>2851
                     /locus_tag="VNY79_01375"
     CDS             2396..>2851
                     /locus_tag="VNY79_01375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HWX71128.1"
                     /translation="MTVLVTGGAGYIGSHMVLELGDAGQRVVVLDNLSTGFSWAVAEG
                     VPLATGDSGDQALVARLIREYGIEAIIHFAASVVVPESVRDPLAYYRNNTINTRALIE
                     CAVNNGVRHFIFSSTAAVYGNPTEIPVKEESLTQPISPYGWSKLMSETML"
BASE COUNT          484 a          959 c          913 g          495 t
ORIGIN      
        1 tcgggcgaaa tgcgcgacac ctcgccgtag acgaagtcat cgagcatgac gtcgccgacg
       61 cagagcaccg tttgcgcagc gacgagcttg agggcctctt cgaaatcgaa catgcgtatc
      121 agcggtagcg gtcgggccga tcgagataac cagtcacgta gcgctgcacc gcctcttcga
      181 gcgctgtgaa gtcagcatta taccccgcgc ggcgtagatt tgttgtctcc gcctgggtga
      241 aatactggta gctgtcgcgg atcgaaaccg gcatgtcgat atattcgatc gcgggcttac
      301 ggccgagccc cgcgaacatc gcggtcatca ggtcgcggaa actgcgcgcc atgccgctgc
      361 cgacgttgaa gatgcccgat accgacggcg tctccaagag ccagcggacg acggcgaccg
      421 catcgtccac gtagatgaaa tcgcgcctct gctcgccgtc ggcgatgccc gtccggtgcg
      481 acttgaacag ccggatcgca ctgcccgcct tggcgtcgtc gaaacgcttg gccacgagac
      541 tcatcatctc gcccttgtgg tattcgttgg ggccgaagac attgaagaac ttgagcccgg
      601 cccattgtgg cggcaccttg tccttgcgcg cgacgcgctc gacgacggcg aggtcgaaaa
      661 cgtgcttgct ccagccgtaa aggttcatcg gcttgagccg ccgcagcgcg gcgcgcgacc
      721 agtcgtcgga ataacccgcc tccccgtcgc cgtaggtcgc ggccgaggag gcgtaaatga
      781 atgacgtgcg cgccgacgcg caccactcga acaggcgcag cggcaagcgg aagttggctt
      841 cgatgaccag atcaccgtcc gtcgccgtgg ttgacgaaat ggcgccgaga tgcaccacgg
      901 cctcgagctt gcgcccttcg agccaccgca tgagatcggc cggcgggatg aaatcggcga
      961 actggcggct tgcgagattg cgccatttgc cctcgccgcc aagaacatcg ttgacgacga
     1021 tattgctgcg cccggcttcg ttgaggctcg cgaccacgtt tgatccgatg aaaccggccg
     1081 cgccggtgac caagagcatc gagcctggtg ccgcttgagc tgatcggccc cgcttggccg
     1141 tggcgctcat ttgccccagt ctgggcggcg gggcaactgg acagcggcgg cgcgaccggt
     1201 tacgccttcg ccgccatcga cgataaagtg aatctatatt cacatataat aatgaaccaa
     1261 ggttcccaga ttcgcgccaa tgggcggaag gtcgagccgg actccagccc ggcgcttatc
     1321 gtgccctaca tgtggatcgg cgatttcgtg cgctgccact cggtcgtgca gctcttgcgc
     1381 acccgctttc ccgaacgccc ggtggacatg ctgtcgacga cgctctgcgc gccccttgcc
     1441 gactacatgc ccggcctacg caaggccatt gtcgtcgatc ttccgcggaa gcgccttggt
     1501 ctctcccacc acaaggcgct ggggcggcgc ttgcagagtg agggctatgg cgcggcgctc
     1561 atcatgccgc ggaaatggaa agcggcgctc gcgccgtttt tcgcgggcat tcccgagcgc
     1621 accggctttg tcggcgaggc ccgagtcatt ctgctcaacg acttgcgctt cggcgaacgg
     1681 gtgctgccgc gcatggtcga ccggtgtgcg gccctcgcat tgccgcgcgg cgccaaactc
     1741 ccggaggcct ggccagcgcc ccggctcgac gtaccggcag ccgaggcggc cgcttggcgc
     1801 gccaagcgcg gcttgaccgc cgatggccgg ccggtgatcg cgctcgcccc gggcgcggtc
     1861 gggccctcga agcgctggcc ggccgcctcc tacgccgccc tcacgcgccg gcttgcggcc
     1921 gaaggtgttg ccgtatgggt gttgggcggc cccgacgaga aaccgctcgc gacggagatc
     1981 atcggcgaca cgccggcgcg cgatctcacc ggccccgacc tgcgcgacgc catcctggcg
     2041 ctggcgtcgg cgtcggtcgc ggtctcgaac gattcaggcc tgctccatgt cgccgccgct
     2101 ctcggcacgc cggcgatcgc catattcggc ccgaccagtc cctggcactg ggcgccgctc
     2161 aacccgctcg cggcagcgat ggagatggtg ggagagctgc cctgccggcc atgccacaaa
     2221 ccggtatgcc ggctcgacca tcaccgctgc atgcgcgaca tcgttccggg ggaggtcctg
     2281 gcggcgaccc gccgcgccct cgccgcggtc gccgcggagg atgaattcgc ttcgcggaat
     2341 aacgccgcct tcatcaaatc ggagtaggcg gaaccgggcg cacacggacg aaacgatgac
     2401 ggtactggtc accggcggag ccggttatat cggcagccac atggtgcttg agctcggcga
     2461 cgccggccag cgcgttgtcg tcctcgacaa tctctcgacc ggcttttcat gggcggtcgc
     2521 ggaaggcgtg ccgctggcca ccggcgacag cggcgaccag gccttggtcg cgcgcctgat
     2581 ccgcgagtat gggatcgagg ccatcatcca cttcgccgcg tcggtcgtag ttcccgaatc
     2641 ggtgcgcgac ccgctcgcct attatcgcaa caatacaata aacacccgcg ccttgatcga
     2701 atgcgcggta aacaacggcg tgcgccattt catcttctcc tcgaccgccg ccgtctacgg
     2761 caatccaacc gagattccgg tgaaggagga gtcactcacg cagccgatct cgccttatgg
     2821 gtggtcgaag ctgatgagcg agaccatgct g
//
LOCUS       DATMQB010000039         2417 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_9382, whole genome shotgun sequence.
ACCESSION   DATMQB010000039 DATMQB010000000
VERSION     DATMQB010000039.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2417)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2417)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2417
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_9382"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(139..849)
                     /gene="trmD"
                     /locus_tag="VNY79_01380"
     CDS             complement(139..849)
                     /gene="trmD"
                     /locus_tag="VNY79_01380"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012040706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052906 - tRNA
                     (guanine(37)-N1)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HWX71129.1"
                     /translation="MWRVSVLTLFPDIFPGPLGASLAGKALQAGVWSLDAVDIRAFAT
                     DRHRTVDDTPAGGGPGMVMKPDVLGRAIDATATDERARLLLSPRGLPLTQARVETLAR
                     GPGIVLVCGRFEGVDERVIAARSIEEVSIGDYVLSGGEVAAMVLVDACVRLLPGVMGA
                     AASGAEESFADGLLEYPQYTRPQLWEDRPIPEVLLSGDHGRIAAWRRAEAERLTRERR
                     PDLWAAFIRRFAAGSRTG"
     gene            complement(852..1505)
                     /gene="rimM"
                     /locus_tag="VNY79_01385"
     CDS             complement(852..1505)
                     /gene="rimM"
                     /locus_tag="VNY79_01385"
                     /inference="COORDINATES: protein motif:HMM:TIGR02273.1"
                     /note="Essential for efficient processing of 16S rRNA;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HWX71130.1"
                     /translation="MAGGARICLGQIGAAHGVHGEVRLRSYTSDPRAIANYGPLQTED
                     GRVFAIESLKPAGDHFVARFSGVYNREAARALANAKLYVPRERLPAPEAPDEFYYADL
                     IGLAVLDPTGKRLGTIVAIHNFGAGDLIEVDRAAGGSTEMLPFNAMTVPEVDVAAGRI
                     VVAAAGASFTPSPLAGGDKKAKPNRMRGRDGTQAATQPRAAVGSRRRRPTLSRKRRG"
     gene            complement(1518..1898)
                     /gene="rpsP"
                     /locus_tag="VNY79_01390"
     CDS             complement(1518..1898)
                     /gene="rpsP"
                     /locus_tag="VNY79_01390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HWX71131.1"
                     /translation="MLTIRMARAGTKKRPFYHVVVADSRAPRDGRFIERLGYFNPLLP
                     KERTERLKIDLEKAKAWIAKGAQPSDRVLRFLDAAGVMTRPKRSNPEKAVPRKERKAK
                     AEEAAKAAAAPKAAPAAAAAPPAS"
     gene            complement(1899..>2417)
                     /locus_tag="VNY79_01395"
     CDS             complement(1899..>2417)
                     /locus_tag="VNY79_01395"
                     /inference="COORDINATES: protein motif:HMM:NF013722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HWX71132.1"
                     /translation="GAWAEAAGPLPRSSRIGEEEMIRTQPHERFSTQLSLEPDAARAF
                     AGAVGDTNPLHHDAEFAAATRFGRLLASGPQTTAHLLALTASHFSKRGAMLGLEFWVR
                     FRRPIYADETITLEWLVVSVKASPRLDGEIIDLRGRIRKENGETAVGAKGRVLVTENL
                     APFEKPPVEKGH"
BASE COUNT          376 a          809 c          826 g          406 t
ORIGIN      
        1 tctgttcatt ctcgatttgc ttgagcagat tcatggcgaa ttctccatcg gcggcgcgtc
       61 ggggacgcgc ggttccggcc gggtttcagc gggttggcgc agcttctacg ctaccgcgcg
      121 ggctttgtca ccttcccgtc atcccgttcg cgagccggcg gcaaaacgcc tgatgaacgc
      181 cgcccagagg tcggggcgcc gctcgcgggt gagccgttcg gcctcggcac gccgccaggc
      241 ggcgatcctg ccgtggtcgc cggagaggag gacttcgggg atcggccggt cctcccagag
      301 ctgcggccgc gtatattgcg gatactccag gaggccgtca gcaaagctct cttcggcgcc
      361 ggaagccgcg gcgcccatga cgccgggcaa caggcgcacg caagcgtcga caagcaccat
      421 ggccgcgacc tcgccgccgg agagtacgta atcgccgatc gagacctcct cgatcgaacg
      481 cgcggcgata acgcgctcgt cgacgccttc gaagcgcccg cagacgagga cgatgccggg
      541 gccgcgcgcg agcgtctcga cgcgcgcctg cgtcagcggc aggccgcgcg gcgaaaggag
      601 cagccgcgcg cgctcatccg ttgccgtcgc gtcgatggcg cggccgagca catcgggctt
      661 catgaccatc cctggaccgc cgcccgccgg cgtatcgtcg acggtgcggt gcctgtcggt
      721 cgcgaaggcg cggatatcga cggcgtcgag cgaccacacg cccgcctgca atgccttgcc
      781 ggcaaggctc gcgcccaagg ggccggggaa gatatccggg aaaagggtga ggacgctcac
      841 gcgccacatt tttatcctct ccgcttgcgg gagagtgttg gccggcggcg gcgtgagccg
      901 acggcggctc ggggctgggt cgcagcctgc gtcccgtccc gaccgcgcat tcggtttggc
      961 ttcgctttct tgtcgccgcc ggcaagggga gagggcgtaa acgatgcccc tgcggcggcg
     1021 acgacgatcc ggcctgctgc cacgtcgacc tccggcacgg tcatcgcgtt gaacggcagc
     1081 atctcggtcg accctcctgc cgcccgatct acctcaatca agtcgccggc gccgaaattg
     1141 tggatggcga cgatcgtacc aagccgcttc ccggtcggat cgagcaccgc aagcccgatc
     1201 aggtcggcgt agtagaactc gtcgggtgct tcgggcgccg gcaatcgctc gcgtggcacg
     1261 tagagtttgg cgttggcaag cgcgcgcgct gcctcgcggt tataaacgcc cgagaaccgg
     1321 gcaacgaaat gatccccggc gggcttgagc gactcgatcg caaagacccg gccgtcctcg
     1381 gtttgcagcg ggccgtagtt ggcgatggcg cgcggatcgg acgtgtacga gcgcagccgg
     1441 acctctccgt gcacaccatg cgcggcgccg atttggccga ggcagatgcg cgcgccgccc
     1501 gccatcgttg gcgcctgtta ggacgccggc ggcgcagcgg cggcagcagg cgcagctttc
     1561 ggcgcggcgg cggctttcgc ggcctcctcc gccttggcct tgcgttcctt ccgcggaacc
     1621 gccttttccg gattgctgcg cttggggcgc gtcatcacgc cggcggcgtc gagaaagcgc
     1681 agcacgcgat ccgacggctg cgcgcccttg gcgatccatg ccttggcctt ttccagatcg
     1741 atcttcagcc gttcggtcct ttccttcggc agcagcggat tgaaatagcc gaggcgttcg
     1801 atgaagcgcc cgtcacgcgg cgcgcggctg tcggccacga cgacgtgata gaacggccgc
     1861 ttcttggtgc cggcgcgggc catgcggatc gtcagcattc agtgtccttt ctcaacaggc
     1921 ggtttctcaa aaggtgcaag attctcagtc acaaggacgc ggcctttcgc gcccacggcg
     1981 gtttcgccgt tttccttgcg gatgcggccg cgcagatcga tgatttcacc atcgaggcgc
     2041 ggactagcct tcaccgatac gacgagccac tcgagcgtga tcgtctcgtc cgcatagatc
     2101 ggccggcgga agcggaccca gaattccaag cccagcatcg cgccgcgctt ggaaaaatgg
     2161 gaagccgtca gcgccagcaa atgcgcagtg gtctgcggtc cgctggccaa gagccggccg
     2221 aagcgtgtcg cggcggcaaa ctcggcatcg tgatgcagcg gattggtgtc gccgacggcg
     2281 cccgcgaacg cacgggccgc gtccggctcg agtgagagct gagtggaaaa gcgctcgtgc
     2341 ggctgggtgc ggatcatttc ttcttcccca atccgggaag accggggaag gggcccggca
     2401 gcttcggccc aagcccc
//
LOCUS       DATMQB010000040         3624 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2490192, whole genome shotgun sequence.
ACCESSION   DATMQB010000040 DATMQB010000000
VERSION     DATMQB010000040.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3624)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3624)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3624
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2490192"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..851
                     /locus_tag="VNY79_01400"
     CDS             <1..851
                     /locus_tag="VNY79_01400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HWX71133.1"
                     /translation="AGMKSFALALGGGGARGLAHIAVLEALDEMGVKPAAIAGTSIGA
                     LVGAAYAAGMRAKDIRRHVIAVAHDPSEIWRRLIAARAGSLGDLFTGAFGQATQLDAE
                     KFCAQFLPPEVPADFSALQIPLVVMATDLHGREEAALSSGPLSSALAASMALPGLFRP
                     VVIDGRIMIDGGATNPLPFDQLTGRGDVVVAVDVFGVPPAERDDMPGAWQSVYTTVLI
                     MGSTIVAAKHRHAAPDLMIRPNVGSFRTLDFYQASAILRAAEAVKPEVKERLGGLISD
                     APEKTA"
     gene            complement(823..1266)
                     /locus_tag="VNY79_01405"
     CDS             complement(823..1266)
                     /locus_tag="VNY79_01405"
                     /EC_number="3.5.4.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0052717 - tRNA-specific adenosine-34
                     deaminase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HWX71134.1"
                     /translation="MAASFMDMALAEARAAGEAGEVPVGCVVVCEGAVVARAGNRTLT
                     ERDPTAHAELVAIRAAAAALGSERLDGCDLYVTLEPCAMCAGAVAFARIRRLYYGAAD
                     PKGGAIENGVKFFASPSCHHRPEVYGGLAEADASALLKQFFQARR"
     gene            1385..2626
                     /locus_tag="VNY79_01410"
     CDS             1385..2626
                     /locus_tag="VNY79_01410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine synthase"
                     /protein_id="HWX71135.1"
                     /translation="MDERNDNGGERIAKAIARAGLASRREAEDWIAAGRVAVNGAVIS
                     SPALNVTPHDRISVDGEPLPARERSRLFLYHKPRGLMTTRVDPQGRPTVFQNLPSHLP
                     RLISVGRLDFNTEGLLLLTNDGALARQLELPQTGWLRRYRVRAHGSVTQASLDALRTG
                     ITVDGVHYGPIEAALDRVQGTNLWLTFAIREGKHREVRHVLGDLGLVVTRLIRVSFGP
                     FQLGELAAGAVEEVRTRVLREQLGARLVARSGADFSTPPAPPPPPEKPARPEKKERAH
                     ASDSPKGARDRSTSHTRRANDRAGKKLRPGKKERAPASNSPKGARHRSTSHSWRASEE
                     DRPGKKLRRKFRGLRRDDGKPREAPTAEPRTALLTDRKGRRVLVEHIGQKPPDTVPAA
                     RKARHQRRRSPGPRRQRPRDR"
     gene            2626..3189
                     /gene="rsmD"
                     /locus_tag="VNY79_01415"
     CDS             2626..3189
                     /gene="rsmD"
                     /locus_tag="VNY79_01415"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0052913 - 16S rRNA
                     (guanine(966)-N(2))-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HWX71136.1"
                     /translation="MRVVGGRLRGRSLAAPKTQAIRPTADRLRESLFNILLHTYGDPI
                     AGARVLDLFAGTGALGIEAASRGAAFVLFIDESAEARALLRENVAALGLGGASRIFRR
                     DATKLGPVHPLPPFSLVFVDPPYGQGLSSEALASARAGGWFTADALIVVEEATKSRFA
                     APEEFTELERRRYDDTEFVFLRSASSD"
     gene            complement(3186..>3624)
                     /locus_tag="VNY79_01420"
     CDS             complement(3186..>3624)
                     /locus_tag="VNY79_01420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA mismatch repair protein MutL"
                     /protein_id="HWX71137.1"
                     /translation="RVARQILLIPEIVELDESDVERLLGRAEELGRYGLVLESFGPGA
                     VALRETPALLGEIDGAGLVRDLAEHMSEWDETLPLERRLMQVASSMACHGSVRAGRRL
                     KPAEMNALLREMERTPNSGQCNHGRPTYVELKLADIERLFGRR"
BASE COUNT          575 a         1312 c         1197 g          540 t
ORIGIN      
        1 aagccggcat gaagagtttc gccctcgcgc tcggcggcgg cggcgcccgc ggcctcgccc
       61 atatcgcggt gctcgaggcg ctcgacgaga tgggcgttaa gcccgccgcc atcgccggca
      121 cctcgatcgg cgcgctggtc ggcgccgcct atgcggccgg catgcgcgcc aaggacatcc
      181 gccgccacgt catcgccgtc gcccacgacc cgagcgaaat ctggcgccgc ctcattgccg
      241 cgcgcgccgg ctcgctcggc gatctgttca ccggcgcctt cggccaggcg acacagctcg
      301 acgcggaaaa attctgcgcg caattcctgc cgccagaggt gccggcggat ttctccgcgc
      361 tgcaaattcc gctcgtcgtg atggcgaccg acctgcacgg ccgggaggag gcggcgttgt
      421 cttcggggcc gctctcttcg gcgctcgccg cctcgatggc gcttcccggg ctgttccggc
      481 cggtcgtcat cgacggccgc atcatgatcg atggtggggc gaccaacccg ctgccgttcg
      541 atcagctcac cggccgcggc gatgtcgtcg tcgctgtcga cgtgttcggg gtcccgcccg
      601 cggagcgcga cgacatgccc ggcgcctggc aaagcgttta tacgacggtg ctcatcatgg
      661 gcagcaccat cgtcgccgcc aagcacagac acgccgcgcc cgacctcatg atccggccga
      721 acgtcggcag cttccgcacg ctcgatttct accaggcgag cgccatcttg cgggcggccg
      781 aggcggtgaa gcccgaagtc aaggaaaggc tcggcgggct catcagcgac gcgcctgaaa
      841 aaactgcttg agcagcgccg acgcgtccgc ttccgcaagg ccgccataga cctcgggccg
      901 atgatgacag ctcggcgagg caaagaattt cacgccgttc tcaatcgcgc cgccttttgg
      961 atcggcagcg ccgtagtaga gccggcggat gcgggcgaac gcgaccgccc cggcgcacat
     1021 cgcgcacggt tcgagcgtca cgtagagatc acaaccgtcg agccgttcgg aaccgagcgc
     1081 agcggccgcc gcgcggatcg cgacgagctc ggcatgcgcc gtcgggtcgc gctcggtcag
     1141 cgtgcggttg ccggcgcggg cgacgacggc gccctcgcac acgacgacgc acccgaccgg
     1201 tacctcgccg gcttccccgg cggcacgggc ttccgccaac gccatgtcca tgaacgatgc
     1261 cgccatttcc agatcatcac cgtcgcgccc gccttgtgcc gggcctgacg cctttataca
     1321 cctcgacaaa cggtgcgatg ccgggcaccg gttcggcatg accaagatga acgcggatga
     1381 cacgatagac gagcgcaacg acaacggcgg tgaacgtatt gccaaggcga tcgcgcgcgc
     1441 cggcttggct tcccgccgcg aggccgagga ctggatcgcc gctggccgcg tcgcggtcaa
     1501 cggcgcggtc atcagctcgc ccgcgctcaa cgtgacgccg cacgaccgaa tcagcgtcga
     1561 cggcgaaccg ctgccggcgc gcgagcgctc gcggctcttc ctctatcaca agccgcgcgg
     1621 cctcatgacc acgcgcgtcg acccccaggg ccggccgacc gtctttcaga atttgccatc
     1681 gcacctgccc cgcctcatca gcgtcggccg gttggatttc aacaccgaag gcctgctgct
     1741 gctcaccaat gacggcgcgc tcgcgcgcca gctcgagctg ccgcaaaccg ggtggctgcg
     1801 gcgctaccgg gtgcgcgccc acggctcggt cacccaggcg agcctcgacg cgctgcgcac
     1861 cggcatcacg gtcgacggtg tccactatgg gccgatcgag gccgcactcg accgggtgca
     1921 gggcacgaat ctgtggctta cgttcgcgat ccgcgagggc aagcaccgcg aggtgcgtca
     1981 tgtgctcgga gatctcgggc tcgtggtgac ccgtctgatc cgcgtctcgt tcggcccgtt
     2041 tcagctcggg gaactcgccg cgggggcggt cgaggaagtg cgcacgcgcg tgttgcgcga
     2101 gcagcttggc gcgcgcctgg tcgcgcgctc gggcgcagat ttttccacgc cacctgcgcc
     2161 gccccctcca cctgaaaagc ccgctcgtcc tgagaagaag gagcgtgcgc acgcgagcga
     2221 tagtccaaaa ggagcgcgcg accgatcgac cagccatacc cggcgggcga acgatcgtgc
     2281 ggggaaaaag cttcggcctg gaaagaaaga gcgcgcgccc gccagcaaca gcccaaaagg
     2341 agcgcgccac agatccacca gccattcctg gcgggcgagt gaggaagatc gtccggggaa
     2401 aaaactgcgg cgcaaattcc gtggcttgcg ccgggacgac ggaaagccgc gcgaggcccc
     2461 aaccgcagaa ccgcgcaccg ctctgttgac cgaccgcaaa ggccgccgcg tgctcgtcga
     2521 acacatcggg cagaaaccgc ccgatacggt accggcggca cgcaaggcac gccatcagcg
     2581 gcggcgctct ccggggccac gccggcagcg gccgcgcgac cgctgatgcg cgtcgtcggc
     2641 gggcgcctgc gcggccgctc ccttgccgcg ccgaagaccc aggcgatccg gccgaccgcc
     2701 gaccgcctgc gcgaatcgct cttcaacatt ctgctccaca cctacggcga tccgatcgcc
     2761 ggcgcgcgtg tgctcgatct tttcgccggc accggcgcgc ttggcatcga agcggcctca
     2821 cgcggcgccg ctttcgtcct gttcatcgac gagagcgccg aggcgcgcgc gctgctgcgc
     2881 gagaacgtgg ccgcgctcgg cctcggcggc gcgtcgcgca tctttcgccg cgacgcgacc
     2941 aagctcggcc cggtgcatcc gctgccgcct ttttccctcg tcttcgtcga tccaccttac
     3001 ggccaaggcc tctcttccga ggcactcgcg tcggcgcgcg cgggcggatg gttcaccgcc
     3061 gacgcgctga tcgttgtcga ggaagcgacc aagtctcggt tcgctgcgcc ggaagagttt
     3121 accgaactcg agcggcggcg ttacgacgat accgagttcg tcttcctgcg ctcagcgtca
     3181 tcggactagc gccgaccgaa cagccgctcg atgtcggcga gcttcaattc cacgtaggtc
     3241 gggcggccgt gattgcattg gccggaattg ggcgtccgct ccatctcgcg cagcagcgca
     3301 ttcatctcgg ccggcttgag ccggcgcccg gcgcgcaccg agccgtgaca ggccatggag
     3361 gaggcgacct gcatcaggcg gcgctcgagc ggcagggtct cgtcccattc gctcatgtgc
     3421 tcggcgaggt cgcgcaccag gccggcgccg tcgatctcgc cgagcagcgc cggcgtctcg
     3481 cgcagcgcca ccgcgccggg gccgaaagat tcgagcacaa gcccgtagcg cccgagttct
     3541 tccgcacggc cgaggaggcg ctcgacgtcg ctctcgtcga gctcgacgat ctccggaatg
     3601 agaagaatct ggcgcgcgac gcgg
//
LOCUS       DATMQB010000041         5055 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3422094, whole genome shotgun sequence.
ACCESSION   DATMQB010000041 DATMQB010000000
VERSION     DATMQB010000041.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5055
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3422094"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            232..1635
                     /locus_tag="VNY79_01425"
     CDS             232..1635
                     /locus_tag="VNY79_01425"
                     /EC_number="2.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003849 - 3-deoxy-7-phosphoheptulonate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-7-phosphoheptulonate synthase class II"
                     /protein_id="HWX71138.1"
                     /translation="MSKRTAAAKWSPDSWRARPIVQMPGYPDGKTLAEVEAQLASFPP
                     LVFAGEARNLKRTLAQVAAGEAFLLQGGDCAESFAEHGANNIRDFFRLFLQMAVVLTY
                     AAASPVVKVGRIAGQFAKPRTSPVEKRGGVELPAYRGDIINGTEFTAEARTPDPRRQL
                     EAYRQSAATLNLLRAFAGGGYANLSNAHQWMLSFVKDSPQSKRYSNLANHITEALGFM
                     RACGVDPERHTELRTTDFFTSHEALLLGYEQAFTRVDSTTGDWYCTSGHMLWIGDRTR
                     QPDHAHIEFCRGIKNPLGLKTGPTQKPDELIRLIDLLDPDNEPGRLTLICRMGADKAG
                     DCLPPLVRAVKREGRNVVWSCDPMHGNTITSVTGYKTRPFDQILKEVRTFFQVHGAEG
                     TYPGGVHLEMTGQNVTECTGGARAISDEDLNDRYHTVCDPRLNAEQSLDLAFLLADLL
                     KAKRQDKSKPLPAVAGL"
     gene            1956..4127
                     /gene="katG"
                     /locus_tag="VNY79_01430"
     CDS             1956..4127
                     /gene="katG"
                     /locus_tag="VNY79_01430"
                     /EC_number="1.11.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011579969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004096 - catalase activity [Evidence
                     IEA];
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="catalase/peroxidase HPI"
                     /protein_id="HWX71139.1"
                     /translation="MDAKTDDKSAGKCPFGQAHTNRDWWPSQLNIQILHGNSSLSDPM
                     GKQFDYAKEFKSLDLNAVIKDLHALMTDSQDWWPADFGHYGGLFIRMAWHSAGTYRIA
                     DGRGGAGAGQQRFAPLNSWPDNANLDKARRLLWPIKQKYGRKISWADLMILAGNVALD
                     SMGFKTFGFGGGRADVWEPEELYWGPEGTWLGDERYSGERQLQNPLGAVQMGLIYVNP
                     EGPNGKPDPVAAAKDIRETFFRMAMNDEETVALIAGGHTFGKTHGAGDPSLIGREPEG
                     AAVEDQGLGWKSRHGTGFGADAITGGPEVTWSQTPTKWSNHFFDNLFNNEWELTKSPA
                     GAHQWKAKGAAATIPDAHDKSKKHVPTMLTTDLSLRMDPAYEKISRRFFEHPDQFADA
                     FARAWFKLTHRDMGPIHRYLGLLVPKEILIWQDPIPAVNHPLIDEKDVAALKAKILAS
                     GLSVSQLVSTAWASASTFRGSDKRGGANGARIRLSPQKDWEINQPKQLATVLAKLEAI
                     QKEFNSSAAGSKKVSLADLVVLGGCAAIEKAAKDAGINAKVPFEPGRMDASQDQTDVD
                     SFKPLEPVADGFRNHYRGTSLMSPEEALIDRTQLLKLTAPEMTVLVGGLRVLGTNADG
                     SKHGVFTKKPETLTNDFFVNLLDMSTQWQPSGDDVYEGRDRKTKAVKWTGTRVDLIFG
                     SHSQLRALAEVYACADSKEKFVKDFVAAWTKVMNADRFDLA"
     gene            4307..>5055
                     /locus_tag="VNY79_01435"
     CDS             4307..>5055
                     /locus_tag="VNY79_01435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HWX71140.1"
                     /translation="MNKVPADGLAIAVAQLNPIVGDVSGNLERARIARAEAARDGADI
                     VAFSELFIAGYPPEDLVLKPAFQAACRAAVEALARETGDGGPAVLIGTPWVEDNKLHN
                     AYALLAGGRVEAIRFKVNLPNYGVFDEKRVFAPGPVPGPVNFRGVRLGLPICEDTWTD
                     WGDYENVVECLAETGAELLLVPNGSPYWRDKVDTRLNVAVARVTEAGLPLIYVNQVGG
                     QDELVFDGASFALNADRSIAFQLPAFRECVVT"
BASE COUNT          953 a         1653 c         1632 g          817 t
ORIGIN      
        1 ccgccgagga gctggtcacc atgcggcacc gaagtgcgag ttatgcccgc gaagcagccg
       61 aatagcgaag tcgccgggct gtcgccggct ggggccgccg tgtatatatc cgggctcatt
      121 ccggccgggc cgcgatagtg gcgcgagccg gaatccatag ccgccgttcg tgaatatgga
      181 ttccgcgcac gcgggctgac gccgcgcccg ggtgacggct tggagagacg catgtcgaag
      241 cgaaccgccg cggcgaaatg gagccccgac tcctggcgcg ccagaccgat cgtgcagatg
      301 cccggctacc cggacggcaa aacgctcgcc gaggtcgagg cgcaactggc gagttttccg
      361 ccgctcgttt tcgccggcga ggcgcgcaat ctcaagcgca ccctggcgca ggtcgcggcc
      421 ggcgaagcct ttttgctgca gggcggcgat tgcgccgaga gcttcgccga gcacggcgcc
      481 aacaacatcc gcgatttctt ccgcctgttc ctgcagatgg cggtggtgct cacctatgcg
      541 gcggcgtcgc cggtcgtcaa ggtcggccgc atcgccggac agtttgccaa gccgcgcacc
      601 tcgccggtgg aaaagcgcgg cggcgtcgag ctgccggcct atcgcggcga catcatcaac
      661 ggtaccgagt tcacggcgga ggcgcgcacg cccgatccgc gccggcagct cgaggcctat
      721 cggcagtcgg cggcaacgct caacctgctg cgcgctttcg ccggcggcgg ctacgccaat
      781 ttgtcgaacg cgcatcaatg gatgttgtcc ttcgtcaagg acagcccgca gtcgaagcgc
      841 tattccaatc tcgccaacca catcaccgag gcgctcggct tcatgcgcgc ctgcggcgtc
      901 gatcccgagc ggcataccga gctgcgcacc accgatttct tcaccagcca cgaggcgctg
      961 ctgctcggct acgagcaggc cttcacccgc gtcgattcga cgaccggcga ctggtactgc
     1021 accagcggcc acatgctctg gatcggcgac cgcacccggc agccggacca cgcccatatc
     1081 gagttctgcc gcggcatcaa gaatccgctc gggctcaaga ccggcccgac gcagaagccg
     1141 gacgaactca tcaggctcat cgacctgctc gatccggaca acgagccggg tcgcctgacg
     1201 ctgatctgcc gcatgggcgc cgacaaggcc ggcgactgcc tgccgccgct cgtgcgcgcg
     1261 gtcaaacgcg aaggccgtaa cgtcgtgtgg tcatgcgatc cgatgcacgg caacaccatc
     1321 acctcggtga ccggctacaa gacgcggccg ttcgaccaga tcctcaagga ggtgcgtacg
     1381 ttctttcaag tgcacggcgc cgaaggaacg tatcccggcg gcgtgcatct ggaaatgacc
     1441 gggcagaacg tcaccgaatg caccggcggc gcgcgcgcaa tcagcgacga agacctcaac
     1501 gaccgctacc acactgtgtg cgacccgcgg ctcaatgccg agcagtcgct cgatctcgcc
     1561 tttttgctcg ccgacctgct caaggccaag cgccaagaca aatcgaagcc gctgcctgcg
     1621 gtcgcaggat tgtagcgggg acggaggacg gaccgaggac ggcggacaga cggcggagtc
     1681 gcatcaaaca aagagatgga aagcgaatat tccttttcta tcattcatcc tccgtcctcc
     1741 ggctacctac gaaccgttta gcctgatgcg tccgcgcctg ctggccgaac caccggcggt
     1801 gtgaagtctt cgaggcgatg ccggccggat cgtggaacga cgcgaatgga atgccgctct
     1861 gccgccatac cggctatgag gctggatcac tttccaagaa ttgatgatcc ttgtataccg
     1921 agagggaaaa accagaacac gatcggagaa gaacaatgga cgccaagaca gacgacaaga
     1981 gcgcaggcaa gtgccccttc ggccaagcgc acaccaaccg agactggtgg ccgagccaac
     2041 tgaacattca gatccttcac gggaactcgt ccctgtccga tccgatgggc aagcagttcg
     2101 actacgccaa ggagttcaag agcctcgact tgaacgccgt gatcaaggat ctgcatgcct
     2161 taatgacaga ctcgcaagat tggtggccgg ccgactttgg acactacggt ggattgttca
     2221 tccgcatggc gtggcacagc gcgggcacgt accgcatcgc cgacggccgc ggcggcgccg
     2281 gtgctgggca gcagcgcttc gccccgctca acagctggcc agacaatgcg aacctcgaca
     2341 aggcgcgccg gctgctgtgg ccgatcaagc agaagtacgg ccgcaagatc tcctgggccg
     2401 acctgatgat tctcgccggc aacgtcgcgc tcgactcgat gggcttcaag acgtttggct
     2461 ttggcggcgg acgcgcggat gtctgggagc ccgaagagct ctattggggt cccgagggaa
     2521 cgtggctcgg ggacgagcgc tacagcggcg aacgccagct gcagaatccg ctcggcgccg
     2581 tgcagatggg cctgatctac gtcaatccgg aagggcctaa cggcaagcct gatcccgttg
     2641 cggcggccaa ggacatccgc gagacgttct ttcgcatggc gatgaacgat gaggagaccg
     2701 tcgcgctgat tgccggcggc cacaccttcg gcaaaaccca cggcgccggc gatccgtcgc
     2761 tgatcggccg ggagccggag ggggccgccg tcgaggatca gggcctcggc tggaagagca
     2821 ggcatggcac aggctttggg gccgacgcca tcaccggcgg tccggaagtc acctggtcgc
     2881 agacgccgac gaagtggagc aaccacttct ttgacaacct gttcaacaac gaatgggagc
     2941 tgacgaagag cccggccggc gctcatcaat ggaaggcgaa aggtgccgcc gccacaatcc
     3001 cggatgccca cgacaagtcg aaaaagcatg tgccgaccat gctgacgacg gacctgtcgc
     3061 tgcggatgga ccccgcctac gaaaagatat cgcgacgctt cttcgagcat ccggatcagt
     3121 ttgcggatgc gtttgcccgc gcgtggttca agctcacgca ccgcgacatg ggtccgatcc
     3181 atcgttacct cggcctgcta gtcccgaagg agatcctgat ctggcaggac ccgatccccg
     3241 cagtgaatca tccgctgatc gatgaaaagg atgtcgccgc gctgaaagca aagatcctcg
     3301 cgtccggcct gtcggtatcg cagcttgttt ccacggcctg ggcctcggcc tcgaccttcc
     3361 gcggttccga caagcgcggc ggagcgaatg gcgcgcgtat tcgtctgagc ccgcagaagg
     3421 attgggagat caatcagccg aagcagctcg cgacggtgct ggcgaagctc gaagcgatcc
     3481 agaaggagtt caacagctcg gccgccggca gcaagaaggt ctcgcttgcc gacctggtcg
     3541 ttctcggcgg ctgcgccgcg atcgagaagg ccgccaagga cgccgggatc aacgcgaagg
     3601 ttcccttcga gccggggcgc atggatgcat cgcaggatca gaccgacgtc gactcgttca
     3661 agccactcga accggtcgct gacggtttcc gcaaccatta ccgcggcacg tcgctcatgt
     3721 cgccggagga ggcgctgatc gacaggacgc agctgctgaa actgaccgcg ccggagatga
     3781 cggtgctcgt cggcggcctg cgcgtgctcg gcacgaacgc cgacgggtcc aagcacggcg
     3841 tcttcaccaa gaagccagaa acgctgacca acgacttctt cgtcaatctg ctcgacatga
     3901 gcacgcagtg gcagccgtcc ggcgacgacg tgtacgaggg tcgcgaccgc aagacgaagg
     3961 cggtcaagtg gaccggcacg cgcgtcgacc tgatcttcgg ctcgcactcg caactgcggg
     4021 cgcttgcgga agtctatgcg tgtgcggact cgaaggagaa gttcgtgaag gacttcgtgg
     4081 ccgcctggac caaggtgatg aacgctgacc gtttcgacct cgcctgatcg cggcggagtg
     4141 gtcggcgagg gcttctggag cggagcgtga tcgagaggcc aggccggggc cgcggcctgg
     4201 gctgctcgcg cgcactcccg cgggtcggtc gggccgtaga gaagcagccc gggccgtccc
     4261 ggcgagccca ttgccggagc ggacgctccg gcgctagacc ttggccatga acaaggttcc
     4321 cgccgacggc ctcgccattg cggtggcgca gctcaatccg atcgtcggcg acgtctccgg
     4381 caatctggag cgtgcgcgta tcgctcgcgc cgaagccgcg cgcgacggcg ctgacatcgt
     4441 cgctttttcc gagcttttca tcgccggcta cccgccggaa gaccttgtgc tcaagcccgc
     4501 gttccaggct gcctgccgcg ccgccgttga ggccttggcg cgcgagaccg gcgacggcgg
     4561 tcctgccgtc ctcatcggca cgccctgggt cgaggacaac aaactccaca acgcctacgc
     4621 cctcctcgcc ggggggcgcg tcgaggcgat ccgcttcaag gtcaacctgc cgaactacgg
     4681 cgtgttcgac gagaagcgcg tctttgcgcc agggccggtc cccggcccgg tgaatttccg
     4741 cggcgtgcgg ctcgggctgc ctatctgtga ggatacctgg accgattggg gcgactacga
     4801 gaacgtggtc gagtgcctgg cggagaccgg cgccgagctt ctcctcgtac cgaacggctc
     4861 gccgtactgg cgcgacaagg tcgacacccg cctcaacgtc gcggtcgccc gcgtcaccga
     4921 ggcgggcctg ccgctgatct atgtgaacca ggtcggcggc caggacgaac tggtgtttga
     4981 tggcgcatcg tttgcgctca acgccgaccg atcaatcgct ttccagcttc cggctttccg
     5041 cgaatgcgtc gtcac
//
LOCUS       DATMQB010000042        10960 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3729867, whole genome shotgun sequence.
ACCESSION   DATMQB010000042 DATMQB010000000
VERSION     DATMQB010000042.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10960)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10960)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10960
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3729867"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /gene="bamE"
                     /locus_tag="VNY79_01440"
     CDS             complement(<1..470)
                     /gene="bamE"
                     /locus_tag="VNY79_01440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamE"
                     /protein_id="HWX71141.1"
                     /translation="MGMRGDLGQRGRGRAAASCTLILGLALALAGCFGETFQRGYVLP
                     DGALEQIPLGASQEQVLIVLGTPSTVATVSGEAFYYISQRAERAISFMPTAITDQRVI
                     GIYFDRNRRVQRVAAYGIKDGRVFDFISRTTPTAGTDYNIISGLMHTLENSRMG"
     gene            636..1151
                     /locus_tag="VNY79_01445"
     CDS             636..1151
                     /locus_tag="VNY79_01445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome C chaperone family protein"
                     /protein_id="HWX71142.1"
                     /translation="MIVAQARSAAFYTSYGVPDTVEGRFDLIVLHLVLLLRRLDGEGD
                     AGPGRNRQRSVDRGLGQKLFDAFCQDLDDNLREMGVGDLAVPKRMQRFGEAFYGRRAA
                     YGAALAAAGAQELEKALARNIFEVVRVDERAARLARCARAAASQLDAEEDGALMAGTV
                     TFPNPEAFAHA"
     gene            1189..1704
                     /locus_tag="VNY79_01450"
     CDS             1189..1704
                     /locus_tag="VNY79_01450"
                     /inference="COORDINATES: protein motif:HMM:NF014657.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HWX71143.1"
                     /translation="MPLALENVPETGQHLDLVASAEVRAGVARMAGLRDLPRLQASFE
                     VTRHGSGLRVRGRVSATVGQACVVTLEPLASDVEEAIDLVFAPPSAIKRDGEGAGAEE
                     RNPAESWSEPEPLIGGTVDLGALATEFLILGLDPYPRKPGAVFQPPGEASSDEGPFAA
                     LAELKRGRHGH"
     gene            1792..2844
                     /gene="plsX"
                     /locus_tag="VNY79_01455"
     CDS             1792..2844
                     /gene="plsX"
                     /locus_tag="VNY79_01455"
                     /EC_number="2.3.1.274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012170822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043811 - phosphate:acyl-[acyl carrier
                     protein] acyltransferase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HWX71144.1"
                     /translation="MSQKVRIALDAMGGDHGPAVVVAGAELALARHPESEFLLFGNSS
                     AVEPLVAARPALRSASRLVHTEIAVRMEDKPSQALRYGRWKSSMWLAIDAVKKRQADV
                     AVSAGNTGALMAMAKFELKTLAGIERPAIAAIWPTVRGESIVLDVGASIGADAEHLAD
                     LAVMGAATARILLGVARPSVGLLNIGVEEVKGLEQVREAGRILREAERTDLDYVGFVE
                     GDDIGRGKVDVVVTEGFAGNIALKTAEGTARQIGEYIRAAMGRSLSGRIGYLLARSAF
                     QELKDRMDPRQANGGVFLGLNGIVIKSHGGTDAEGFAAAIEVGYGVVRDELLAKITSA
                     LGRMREPRQALGGAAS"
     gene            2841..3818
                     /locus_tag="VNY79_01460"
     CDS             2841..3818
                     /locus_tag="VNY79_01460"
                     /EC_number="2.3.1.180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007611077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0033818 -
                     beta-ketoacyl-acyl-carrier-protein synthase III activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase III"
                     /protein_id="HWX71145.1"
                     /translation="MTARRSVVLGCGSYLPSHVMTNADLAGKMDTSDEWIVQRTGIHE
                     RRIAAPGEVTSQLATHAARAALAHAHVDAESIDLIVLATSTPDNTFPASAVSVQADLG
                     ITHGAAFDLQAVCSGFVYALATADGLLRSGAFSRALVIGAETFSRILDWSDRGTCVLF
                     GDGAGAVVVDAQELAGTREDRGILTVRLRSDGRHKMKLYVDGGPSSTRTVGHLRMEGR
                     EVFRHAVAMITDAVEDAFKATGYSADDIDWFIPHQANKRIIDGSAHKLGIAPAKIVTT
                     VDRHGNTSAASIPLALADAVADRRIKRGDLLLLEAMGGGFTWGAALVRW"
     gene            3926..4255
                     /locus_tag="VNY79_01465"
     CDS             3926..4255
                     /locus_tag="VNY79_01465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="integration host factor subunit alpha"
                     /protein_id="HWX71146.1"
                     /translation="MSMSGKTVTRADLCEAVYQKVGLSRTESATLVELVLKEITDCLE
                     RGETVKLSSFGSFVVRKKGQRIGRNPKTGKEVPISPRRVMVFKPSAILKQRINSDPDG
                     SSNDAGK"
     gene            4325..4870
                     /locus_tag="VNY79_01470"
     CDS             4325..4870
                     /locus_tag="VNY79_01470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HWX71147.1"
                     /translation="MAEEVNVPQHVLRFWESRFAQIRPLKRGGGRRYYRPDDVDLLRG
                     VRHLLYGEGYTIRGVQRILREEGISFVQNVWRTGAQQPPPEAQQDRAGERDGADSGGA
                     RPPAEPEFFGLLPLPSAGPEPDEAATARREPAMTPSPTSAPRRRINDADRHQLQAALD
                     ELVTCRRLIDAALADTPADDD"
     gene            4976..5695
                     /locus_tag="VNY79_01475"
     CDS             4976..5695
                     /locus_tag="VNY79_01475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016657 - obsolete oxidoreductase
                     activity, acting on NAD(P)H, nitrogenous group as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HWX71148.1"
                     /translation="MNIEASATSDAQTLERLLANRYSCRGFLAEPVADSVIERILAMA
                     QRSPSWCNAQPWQVIVTKGEATERFRAALHAHVTSAPAAPDIAFPREYRGAYLARRRA
                     CGFALYDAVGVKRGDRGASAVQMLENYRFFGAPHVAIITTDEALGTYGAVDCGAYVST
                     FLLAAQSLGVASIPQAALASHSKFVRDYFAIGEDRLVVCGISFGYEDRSHKANGFRTD
                     RASLDEAVRWVGDQRAAAAGE"
     gene            5797..6960
                     /locus_tag="VNY79_01480"
     CDS             5797..6960
                     /locus_tag="VNY79_01480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006336045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX71149.1"
                     /translation="MQVLNVPTPAYLADEEFSMFRNSVGRFLDDNAPPEKFEGWRRAK
                     VVERDLWTKAGAAGLLGLSTSTAYGGIGGDFRHETILIEEAAKRGIEGWGASLHNAIV
                     MPYIEIYGTEDQKKRWLPKLACGDYVGAIAMTEPGTGSDLQAVKTSARKSGNQYVING
                     SKTFITNGQTANLVIVVSKTDPAQGAKGTSLIVVETDEAEGFERGRNLHKIGLEAADT
                     SELFFNDVKVPTANLIGTEEGRGFYQLMDQLPQERLIIAVHSIAMIERALAVTIDYVK
                     ERKTFGRPIIDNQAVKFKLAECKTEATVARIFVNHCIEQHLQRKLDAVTASMAKYWIT
                     DLQGKIVDECLQLHGGYGYMDEYPIARMYKDARVARIFGGANEIMKILIARTL"
     gene            7011..8561
                     /locus_tag="VNY79_01485"
     CDS             7011..8561
                     /locus_tag="VNY79_01485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HWX71150.1"
                     /translation="MYPGKHAATDPQRPAFIMAQAGAVVTYGELEARTNRLAHLLRAR
                     GLSRLDHYAIFMENSPRYLEACGAAERAGLYYTCINSYLTAEELAYIVNNSEAKILVT
                     SDAKRDVALAALGSCPKIELCLVVDGRGNGKRVRNLDEATAPYPATPIADEALGTPML
                     YSSGTTGRPKGILRPLPMQPPSQQLALFDFLVRLWRYRDRMIYLSPAPLYHSAPQAAV
                     NLTIRQGGTAIIMERFDPERYLELVQTYKVTHSQLVPTMFSRLLKLPEAVRRRYDLSS
                     LEVVIHAAAPCPVQVKEQMIEWWGPIVHEYYGATEAVGFSACDSAEWLAHRGTVGRVL
                     FGELHVLDDAMQPCPTGTPGTLWFKTATPFQYFNDPEKTAEARSSDGSMSTVGDVGYV
                     DNDGYLYLTDRASFMIISGGVNVYPQECENLLITHPKVADAAVFGVPNEDLGEEVKAA
                     IQLMPGIAPGPAIAEELIAFCAEHLARQKCPRSIDFEAELPRLPTGKLYKRVLRDRYW
                     KDHKTRIV"
     gene            8582..9814
                     /locus_tag="VNY79_01490"
     CDS             8582..9814
                     /locus_tag="VNY79_01490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006932248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HWX71151.1"
                     /translation="MQEFYDASEARAPEMREREQFARMPEHIARAMSAPGWAEQLAGV
                     EARSVTSRAALAALPVLRKSELKDRQTAKPPLGGFAVTAPGKLKRLLMSPGPIFEPEG
                     HGADWWSSARALFAAGFRSGDIVHNSFAYHLTPGGFILEAGAHALGCTVIPGGIGNTE
                     QQVEAIVHLKPSGYTGTPDFLKILLDAAEKAGKDVSSLKRGLVSAAALPSSLREHLAG
                     RGVAVKQCYATAELGVIAYETPVLEGMVVNESVIVEIVRPGTGDPVAEGEVGEVVVTS
                     FNADYPMIRLATGDLSTVLAGRSPCGRTNMRIKGWMGRADQTTKVKGMFVHPGQIAEV
                     AKRHPELGRVRLSVTREAEQDVMTLAAECAARPGGLEDAVAASLQSVTKLKGRVQLVA
                     PGTLPNDGKIIADERSIG"
     gene            complement(9854..>10960)
                     /locus_tag="VNY79_01495"
     CDS             complement(9854..>10960)
                     /locus_tag="VNY79_01495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HWX71152.1"
                     /translation="KTSRAARIEAGAFGPALEAQLKPHALTLRHFPQSFECSTLGGWI
                     ATRSGGHFATLYTHIDDLVESLRAVTPKGVIETRRLPGSGAGPSPDRLLIGSEGILGI
                     ITQAWMRLQDRPKFRAGGAVQFPDFFTAAKALRAISQAGLYPANCRILDAEEAFNTGA
                     ADGSVAIMVLAFESGDHPVEPWMARARECCADHGGKAGGGDTADAHRAGAAGAWRNAF
                     IRMPFARERTIERGVINDTFETAITWERFEAFHDKVKAATERAIVEATGRTGQVTCRV
                     THVYPDGPAPYFTFHAAGRHGQLRAQWDTIKSAGLDAVIENGGTVTHHHAVGRDHRRW
                     YDRQRPPLFAAALKAAKATMDPQALLNPGVLIDP"
BASE COUNT         1892 a         3623 c         3624 g         1821 t
ORIGIN      
        1 atgcccatgc ggctgttttc gagggtgtgc atgaggccgc tgatgatgtt gtagtcggtt
       61 ccggccgtcg gcgtggtgcg gctgatgaaa tcaaagacgc ggccgtcctt gatgccgtag
      121 gccgcgacgc gctgcacgcg ccggttcctg tcgaaataga tcccaatgac gcgctggtcg
      181 gtaattgcgg tcggcatgaa cgagatggca cgttcggcgc gctgcgaaat gtagtagaac
      241 gcttcgccgg agacggtcgc gacggtcgaa ggcgtgccaa gcacaatcag cacctgttcc
      301 tgcgacgccc ccagcggaat ctgctcgagc gcgccgtccg gcagcacata gccgcgctga
      361 aacgtttcgc cgaaacaccc ggcgagcgcg agagcgagcc cgagaatcag cgtgcagctt
      421 gccgctgccc gtccgcgccc acgctgccca agatcgcccc tcatccccat ccaccttgcg
      481 tccaacccgc gtctgcccta cgcccgaagc caggaaatga caatccgccg cgtgacggcg
      541 ccttggcacc gccgccgcgg gtccgggcta accctatgat actcccccca tttcggcgcg
      601 attccaacac ccgcatcatt cgcgcgctct atggcatgat cgtggcgcag gcgcgctccg
      661 cggcctttta cacgagctac ggcgtgccgg acaccgtcga gggccgtttt gacctgatcg
      721 tgctccatct cgtgctcctc ctgcgccgcc tcgacgggga gggtgacgcc gggccggggc
      781 gaaatcgtca gcgaagtgtc gaccgcggcc tcggacagaa gctgttcgac gcgttctgcc
      841 aggatctcga cgacaacctg cgcgagatgg gcgtcggcga cttggcggtg ccaaaacgga
      901 tgcagcgttt cggcgaggca ttttacggcc gccgggctgc ctatggcgcc gcgcttgcgg
      961 ccgccggcgc gcaggagctt gagaaggcgc tcgcacgcaa tatcttcgag gtggtccgcg
     1021 tggacgagcg agccgcgcgg ctcgcgcgtt gcgcacgcgc cgcggcgagc cagttggatg
     1081 ccgaggagga tggcgctctg atggccggga cagtgacttt tcccaaccct gaggcctttg
     1141 cccatgcgtg agcctcgatc cgaaaacggg cgccggacgc cgtggcacgt gccgctcgcg
     1201 ttggagaatg tccccgagac cgggcagcat ctcgatctcg ttgccagtgc cgaagtgcgc
     1261 gccggcgtgg cgcggatggc ggggctccgc gatttgccgc gtctgcaggc gagcttcgag
     1321 gtgacgcggc acggcagcgg gctacgcgtg cggggccgtg tgtcggccac cgtcggccag
     1381 gcctgcgtcg tcacgctcga accgctcgcc agcgatgtcg aggaggcgat cgacctcgtg
     1441 ttcgcaccgc catccgcaat caaacgcgac ggcgagggag ccggtgcgga agagcgcaac
     1501 ccggccgaaa gctggagcga gccggagccg ttgatcggcg gcacggtcga tctcggcgcg
     1561 ctcgcgacgg agtttctcat cctcgggctt gatccctatc cccgcaagcc cggggcggtc
     1621 ttccaacctc caggcgaggc atcttccgac gaaggcccgt tcgccgccct cgccgagctc
     1681 aagaggggga gacatggcca ctgatcgcag ttgtgtcccg gcaccgaacc gttattctcg
     1741 ccaccggtca catctccccg tcttgcggac ttgacgccgc aaggtcattg aatgtcgcaa
     1801 aaggtccgca ttgctctcga cgcgatgggg ggagaccatg gccctgccgt ggttgtcgcc
     1861 ggcgcggaat tggcgttggc gcgtcatccc gagagcgaat tccttctgtt cggcaacagc
     1921 tcggcggtcg agccgctcgt cgccgcgcgg ccggctctcc gttcagcctc gcgtctcgtc
     1981 cacaccgaga ttgccgtgcg catggaggac aagccgagcc aggcgctgcg atacggccgc
     2041 tggaagtcct cgatgtggct cgcgatcgac gcggtcaaga aacggcaggc cgatgtcgcc
     2101 gtctccgccg gcaataccgg cgccctgatg gccatggcca aattcgaact caagacgctt
     2161 gccgggatcg agcggcccgc catcgcggcg atctggccca cggtgcgcgg cgagtcgatc
     2221 gtgctcgacg tcggcgcctc gatcggtgcc gatgccgagc acctcgccga tctcgccgtc
     2281 atgggcgccg ccacggcgcg cattctgctc ggcgtcgccc ggccgagcgt cgggctcctc
     2341 aacatcggcg tcgaggaggt caagggtctc gaacaggtac gtgaagccgg ccggatattg
     2401 cgcgaggcgg aacggaccga tctcgactac gtcggattcg tcgaaggcga cgatatcggc
     2461 cgcggcaagg tcgatgtcgt ggtcaccgaa ggctttgccg gcaacatcgc gctcaagacc
     2521 gccgagggga ccgcccggca gatcggcgaa tacatccggg ccgccatggg ccgctcgctc
     2581 agcgggcgga tcggctattt gctcgcgcgc tcggcgttcc aggaattgaa ggatcgcatg
     2641 gatccgcgcc aagccaacgg cggcgtcttt ctcggcctca acggcatcgt catcaagagc
     2701 cacggcggca ccgatgccga gggtttcgcc gccgcgatcg aagtcggcta tggcgttgtg
     2761 cgcgatgagc tcctggccaa gatcacgtcg gcgctcgggc ggatgcggga accgcggcag
     2821 gccctcggcg gagccgcatc atgacggcgc gccgctcggt cgttctcggc tgcggcagct
     2881 atttaccgag ccatgtcatg accaacgccg acctcgccgg caagatggac acctccgacg
     2941 agtggatcgt gcagcgcacc gggatccacg aacgccgcat cgccgccccg ggggaagtca
     3001 cgtcgcaact tgccacgcac gcggcgcgcg cggcgctcgc acacgcgcat gtcgatgcag
     3061 agtcgatcga cctgatcgtg ctggcgacct cgacgcccga caatactttt ccggcgagcg
     3121 ccgtctcggt gcaggccgac ctcggcatca cccacggcgc cgctttcgat ctccaggccg
     3181 tctgttccgg tttcgtctat gcattggcga cggccgatgg actcctgcga tcgggtgcct
     3241 tcagccgggc gctggtgatc ggcgcggaga cgttttcgcg cattctcgat tggagcgatc
     3301 gcggcacctg cgttctcttc ggtgacggcg ccggcgccgt tgtcgtcgac gcgcaagagc
     3361 tggcgggcac gcgcgaagat cgcggcattc tcaccgtacg cctgcgctcc gacggccgcc
     3421 acaagatgaa gctctacgtg gatggcgggc cgtcctcgac ccgcaccgtc ggacacctgc
     3481 gcatggaagg ccgcgaggtg ttccgccatg ccgtggcgat gatcaccgac gcggtcgagg
     3541 atgccttcaa ggcgaccggc tatagcgccg acgatatcga ctggttcatc ccgcaccagg
     3601 ccaacaagcg gatcatcgac ggttcggcgc acaagctcgg cattgccccg gcaaagatcg
     3661 tcaccacggt cgatcggcac ggcaacacgt ccgcggcttc gattccgctc gcgcttgccg
     3721 atgcggtggc cgaccggcgc atcaagcgcg gcgacctcct gctgctcgag gcgatgggcg
     3781 gcggcttcac ctggggcgcc gcactcgtgc gctggtgagc aaaagcgccc cctcacaagg
     3841 gcgttgaccg acccggccca agctaatatc gttgataatt cagcacgata cgttgatcgt
     3901 taacgtgcga tcgctgagat tggggctgag tatgtcgggc aaaacggtca cccgagcgga
     3961 tttgtgcgag gcggtctatc agaaggtcgg cttgtcgcgt accgaatccg ccacactggt
     4021 tgagcttgta ctcaaggaaa tcacggactg cctggaacgc ggcgaaacgg tgaagctgtc
     4081 atcgttcggc tcgttcgtgg tgcgcaagaa gggccagcgc atcggccgca atcccaagac
     4141 cggcaaggag gtgccgatct cgccccgccg cgtcatggtg ttcaagcctt ccgccattct
     4201 caagcagcgg atcaattccg atcctgacgg cagcagcaac gacgcgggca agtgacgatc
     4261 acgtgaccat cggggagcgg gggaattgga aaaggcgcct gacgcattcc gcacgatcag
     4321 cgaggtggcc gaggaggtca acgttcctca gcatgtcctg cgcttctggg aaagccgctt
     4381 cgcgcagatc cggccgctga aacggggcgg cgggcggcgc tactaccggc ccgacgacgt
     4441 cgacctgttg cgcggcgtgc gacaccttct ctacggcgag ggctacacca ttcgcggcgt
     4501 acagcgcatc ctgcgcgaag aaggcatctc cttcgtgcag aacgtctggc ggaccggggc
     4561 tcaacagccg ccgccggaag cgcagcagga ccgggcaggg gagcgggacg gcgccgacag
     4621 cggcggtgcg cggccgcctg cagaacctga gttcttcggc ttgctgccct tgccatcggc
     4681 ggggcctgag ccggacgagg cggcaaccgc gcggcgtgaa ccggcgatga cgccttcgcc
     4741 aacgtcagcg ccgcgccgcc gcatcaacga cgccgaccgg caccagctgc aggcggcgct
     4801 cgacgaactc gtcacctgcc gccgcctcat cgacgccgcg ctcgcggaca cgccggccga
     4861 cgacgattga ggcgaagccg ctggttggcc ggttcaatct gcggtcatgg cgatcttccc
     4921 gctccaaacg gcccggcgcc attttgaatt tttccaatcg cacgaggagc gcgttgtgaa
     4981 tatcgaggct tcagcgacga gcgatgcgca gacgctcgaa cggttgctgg cgaaccgcta
     5041 cagttgtcgc ggctttctcg ccgaaccggt tgccgactcg gtgatcgagc ggattctcgc
     5101 catggcgcag cgctcgccat cctggtgcaa tgcgcagccc tggcaggtga ttgtgaccaa
     5161 gggcgaggcg accgagcgct ttcgcgcagc gctccacgcg cacgtgacca gcgcgccggc
     5221 cgcgcccgat attgcttttc cgcgcgaata ccgcggcgcc tatctcgcgc gtcggcgcgc
     5281 ctgcggtttc gcgctctacg acgccgtcgg cgtcaagcgc ggcgaccgcg gcgcttcggc
     5341 ggtacagatg cttgagaact acagattctt cggcgcgccg cacgtggcga tcatcaccac
     5401 ggacgaggcg cttggaacct acggcgccgt cgattgcggc gcctacgtga gcacctttct
     5461 cctcgccgcc cagagcctcg gtgtcgcgtc gattccgcag gcggcgctgg cttcgcattc
     5521 gaagttcgtg cgcgactatt ttgccatcgg cgaggatcgt ctcgtcgtct gcggcatctc
     5581 cttcggctat gaggatcgct cgcacaaggc caacggcttt cgcaccgacc gcgcctcgct
     5641 cgatgaggcg gtacgctggg tcggtgacca gcgcgccgcc gctgcgggcg aataggccgc
     5701 gatggcgaca gccgcaaagc atgcggtacc atccgcggcg tccgccgctc agcggcaaac
     5761 ggcacacaca ctgaagcaag actcaggaga taggccatgc aggttttgaa cgtcccgacg
     5821 ccggcctatc tggcggacga ggaattttcg atgttccgta attccgtggg ccgtttcctc
     5881 gacgacaacg cgccgccgga aaagttcgag ggctggcgcc gggccaaggt ggtcgagcgc
     5941 gacctgtgga ccaaggccgg cgcggccgga ctgttggggc tgtccacctc caccgcctat
     6001 ggcggcatcg gcggcgattt ccgccacgaa accattttga tcgaggaggc ggccaagcgc
     6061 ggcatcgagg gctggggcgc atcgctgcac aatgcgatcg tcatgccgta catcgaaatc
     6121 tacggcaccg aggaccagaa aaagcgctgg ctgccgaagc tcgcgtgcgg cgactatgtc
     6181 ggcgccatcg ccatgactga gcccggcacc ggctccgacc tgcaggcggt caagaccagc
     6241 gcccgcaaga gcggcaatca atacgtgatc aacgggtcga agactttcat caccaacggc
     6301 cagaccgcca atctcgtcat tgtcgtcagc aagaccgatc cggcgcaggg cgccaaggga
     6361 acctcgttga tcgtcgtcga gaccgacgag gcggagggtt ttgaacgcgg ccgcaatctg
     6421 cataaaatcg ggttggaggc cgccgatacc tccgaactgt tcttcaacga tgtcaaggta
     6481 ccgaccgcca acctcatcgg caccgaggaa ggccgcggct tctatcagct catggatcaa
     6541 ctgccgcagg agcgactgat catcgccgtc cacagcatcg ccatgatcga gcgcgcgctc
     6601 gccgtcacca tcgactacgt caaggagcgc aagaccttcg gccggccgat catcgacaac
     6661 caggcggtca agttcaagct cgccgagtgt aagaccgagg cgacggtcgc gcgaatcttc
     6721 gtcaatcact gcatcgagca gcacctgcag cgcaagctcg atgctgtgac cgcctcgatg
     6781 gcgaagtatt ggatcaccga cctgcagggc aagatcgtcg acgagtgcct gcagctccac
     6841 ggcggctacg gctatatgga cgagtatccg atcgcccgca tgtacaagga cgcccgcgtc
     6901 gctcgcatct tcggcggcgc caacgagatc atgaagatac tgatcgcacg cacgctgtga
     6961 gcgtcgggcg cgaccgcagc ggcgcgatgc gccgccaata gggagggccg atgtatccag
     7021 gcaagcatgc cgccaccgat ccgcagcggc cggccttcat catggcgcag gccggggccg
     7081 tcgtgaccta cggcgaactc gaggcgcgca ccaatcgcct ggcccacctt ctgcgggcgc
     7141 gcggcctctc ccgtctcgac cactatgcca tcttcatgga aaacagcccg cgctatctcg
     7201 aagcgtgcgg cgccgccgag cgcgccggcc tctactacac ctgcatcaac tcgtatctta
     7261 ccgcggaaga gctggcctat atcgtcaaca acagcgaagc gaaaatcctg gtcacttcgg
     7321 acgcgaagcg cgacgtggcc ttggccgctc tcggaagctg cccaaagatc gagctttgtc
     7381 tcgtcgtaga cggccgcggc aacggcaagc gcgtgcggaa tctcgacgag gcgacggcgc
     7441 cctatccggc aacgccgatc gccgacgagg cgctcgggac gccgatgctc tattcctcgg
     7501 gtacgaccgg gcggccgaaa gggattttgc ggccgctgcc gatgcagccg ccgtcacagc
     7561 agcttgctct gttcgacttt ctggtccggc tctggcgcta ccgcgaccgc atgatctatc
     7621 tgtcgccggc cccgctctat cactcggcgc cgcaggcggc ggtcaatctc accatccgcc
     7681 agggtggcac ggcgatcatt atggaacgct tcgatcccga gcgatatctg gagctggtgc
     7741 agacctacaa agtgacacac agccagctcg tgcccaccat gttctcgcgc ctgctcaagc
     7801 tgccggaggc ggtgcggcgg cgctacgatc tctcctcgct cgaagtcgtc attcacgccg
     7861 cggcgccgtg cccggtgcag gtgaaggagc agatgatcga gtggtggggg ccgatcgtcc
     7921 acgaatatta cggcgccacc gaagcggtgg gctttagcgc ctgcgacagc gccgaatggc
     7981 tggcgcaccg cggtaccgtg ggcagggtgc tgttcggcga gctgcacgtt ctcgatgatg
     8041 cgatgcagcc ctgtccgacc ggcacgccgg gaacgctctg gttcaagact gcgacgccgt
     8101 tccagtattt caacgatccg gagaagaccg cggaggcgcg ctcgagcgac ggctcgatga
     8161 gcacagtagg cgacgtcggc tacgtcgaca atgacggcta cctctatctg accgaccgcg
     8221 cgagtttcat gatcatctcc ggtggcgtca acgtctaccc gcaggaatgc gagaatcttc
     8281 tgatcacgca tccgaaggtc gccgacgccg ccgtgttcgg ggtgcccaac gaggatctcg
     8341 gcgaggaggt gaaggctgcg atccagctca tgcccggcat cgcgcccgga ccggcgatcg
     8401 cggaggagct gatcgcgttc tgcgccgagc acctggcgcg gcagaagtgt ccgcgctcga
     8461 tcgacttcga ggccgagttg ccgcgactgc cgaccggcaa gctctacaag cgcgtgctgc
     8521 gcgaccgcta ttggaaggat cataagacac ggatcgtctg actctggccc aggatcgagc
     8581 catgcaggaa ttttatgacg cctcggaagc gcgcgcgccg gagatgcgcg aacgcgagca
     8641 gttcgcgaga atgccggagc acatcgcgcg ggcgatgagt gcgccgggct gggccgagca
     8701 gctcgccggc gtcgaggcaa gatccgtcac ctcgcgcgcc gcgctcgccg ctctgccggt
     8761 actgcgcaag tccgagctga aggaccggca gacagcaaaa ccgccgctcg gcggtttcgc
     8821 cgtgaccgcg ccgggaaagc tcaagcggct gttgatgtcg ccgggcccga tcttcgagcc
     8881 ggagggccac ggcgccgact ggtggagttc ggcgcgcgcg ctctttgccg caggctttcg
     8941 ctccggcgac attgtgcaca acagctttgc ctatcatctc acgcccggcg gattcattct
     9001 cgaggcgggg gcgcatgcgc tcggctgcac cgtcattccc ggcggtatcg gcaataccga
     9061 gcaacaggta gaggcgatcg tccatctcaa gccgagcggt tacaccggca cgcccgactt
     9121 cctcaaaatc ctgctggatg ccgcggagaa ggcgggcaag gacgtgtcct cgctcaagcg
     9181 tgggctcgtt tccgccgcgg cgttgccctc ctcgctgcgc gagcatctcg ccggccgcgg
     9241 cgtcgcggtc aagcagtgct acgcgaccgc cgaactcggc gtgatcgcgt acgaaacgcc
     9301 ggtgctagaa ggcatggtcg tcaacgagag cgtcatcgtc gagatcgtac ggccgggcac
     9361 aggcgatccg gtggccgagg gcgaggtcgg cgaggtggtc gtcacttcgt tcaatgccga
     9421 ctacccgatg atccggctcg ccaccggcga tctctccacg gtccttgccg gccgctcgcc
     9481 gtgcgggcgc accaacatgc gcatcaaggg ttggatggga cgggccgacc agaccaccaa
     9541 ggtcaagggc atgttcgtgc acccggggca aattgccgaa gtggccaagc gccatccgga
     9601 gcttgggcgc gtgcggcttt cggtgacgcg ggaagcggag caggacgtga tgacgcttgc
     9661 cgccgagtgc gccgcgcgcc ccggcggctt ggaagacgcg gtggcggcga gcctgcagtc
     9721 cgtgaccaag ctcaagggcc gcgttcagct ggttgcgcca gggacattgc cgaacgacgg
     9781 aaaaattatc gccgacgagc gcagtatcgg ctgaccggcg cagcgcctac ccgccttcac
     9841 gtccgcaaaa actctacgga tcgatcagca cgcccggatt gagcagcgcc tgcgggtcca
     9901 tcgtcgcttt ggccgccttc aacgccgcgg cgaacaaggg cggccgctgg cggtcgtacc
     9961 agcgccgatg gtcgcgcccg accgcatggt gatgggtaac ggtgccgccg ttctcgatca
    10021 cggcatcgag gccggccgat tttatggtgt cccattgcgc gcgcagttgg ccgtgccgcc
    10081 cggcggcgtg gaatgtgaaa tacggcgccg gcccgtccgg gtagacgtgg gtgacgcggc
    10141 aggtgacctg ccccgtgcgt ccggtcgcct cgacaatagc gcgctccgtt gcggccttga
    10201 ccttgtcgtg gaaggcctcg aagcgctccc aggtgatggc ggtctcgaac gtatcgttga
    10261 tgacgccgcg ctcgatggtg cgctcgcgcg caaagggcat gcggatgaac gcgttgcgcc
    10321 aagcgccggc cgcgcccgcg cgatgggcat cggcggtatc gccgccgccg gctttgccgc
    10381 cgtggtcggc gcagcattcg cgggcgcgcg ccatccacgg ctcgacggga tggtcgccgg
    10441 actcgaaggc aagcaccatg atcgcgacac tgccgtcggc agcgccggtg ttgaacgctt
    10501 cctcggcgtc gaggatgcgg caattcgccg gataaagtcc tgcttgcgag atcgctcgca
    10561 aggctttggc agcagtgaag aaatcgggga attgcaccgc gccgccggcg cggaattttg
    10621 ggcgatcctg cagccgcatc cacgcctgcg tgatgatgcc cagaatgccc tccgagccga
    10681 tcagcagccg gtcggggctt ggccccgcgc ccgagccggg gagccgccgc gtctcgatca
    10741 cgcccttcgg cgtgacggcg cgcagcgatt ccacgagatc gtcgatgtgg gtgtagagcg
    10801 ttgcgaaatg accgcccgaa cgggtcgcaa tccaaccgcc gagcgtcgag cactcaaaac
    10861 tctgtgggaa gtggcgcagc gtcaacgcgt gcggtttgag ctgtgcctcg agcgctggcc
    10921 cgaaagcgcc agcttcgatg cgagccgcgc gcgaggtctt
//
LOCUS       DATMQB010000043        11452 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1559945, whole genome shotgun sequence.
ACCESSION   DATMQB010000043 DATMQB010000000
VERSION     DATMQB010000043.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11452)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11452)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11452
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1559945"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..697
                     /locus_tag="VNY79_01500"
     CDS             <1..697
                     /locus_tag="VNY79_01500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71153.1"
                     /translation="AAPADAQASATPFNDAVDLGVAIGRAKGLNAANAEVAGRISLGI
                     FFAETNGKQNIGNARSDTYKGSLQTGVPEDRNGQRRWARIKNAIAAFDPVLVARDDKE
                     EARIGTLDHRFNHWTAVRDGIMNAHADVFPQIPAIVQVLPRSIDQMKLFELIQIIPSP
                     TKSALHSSDLLNYRISDHRIIGYLRNNNIFAFGKNDRSRNSATFREILEAMWLFNGVF
                     ERALAKFSEVRSQ"
     gene            complement(1825..2373)
                     /locus_tag="VNY79_01505"
     CDS             complement(1825..2373)
                     /locus_tag="VNY79_01505"
                     /inference="COORDINATES: protein motif:HMM:NF016701.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GFA family protein"
                     /protein_id="HWX71154.1"
                     /translation="MTPWRLRRAGAKGRVEPFMAACRPCRLRWRMVARRLSGAPMIRG
                     SCLCGRVKYRINGLPFDALNCHCSMCRKAHGAAFRSRATLKAADFEWVQGEGCVTFYE
                     SSPGNHRGFCRVCGSPIVSKFDAHPNYLGLPLGALDDDPGIRPKVHMHVASKAPWFTI
                     TDDLPQIPGEASGPAGATRTGK"
     gene            2765..3553
                     /locus_tag="VNY79_01510"
     CDS             2765..3553
                     /locus_tag="VNY79_01510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septal ring lytic transglycosylase RlpA family
                     protein"
                     /protein_id="HWX71155.1"
                     /translation="MRGRISVALKRFAPVGACAVLCLFLAHCSNSSKIDPRYGVSASP
                     RVVGPGEPVPKGGGTYRVGEPYVIGGRVYVPDENPRYRAEGLASWYGDGFHGRLTANG
                     EVFDLNGITAAHPTMPLPSYARVTNLSNGRSLIVRVNDRGPYHSDRIMDLSVRSAQLL
                     GFHGRGTAWVRVEYAGRAPMEGSDDRILEASLRHDHPAPANGLVRTAAQIRPVPLPPV
                     SPPAQITRTASISAAEADPSAVRRVAVRTGIDGTAQFLNGRGLY"
     gene            3737..4936
                     /locus_tag="VNY79_01515"
     CDS             3737..4936
                     /locus_tag="VNY79_01515"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HWX71156.1"
                     /translation="MPAAFAAVAAGLLAALIAVAHAAPSATATKKDEPFHANVPAALL
                     LDPDSESILYEKNGEELVAPASLAKLMTLEYVFNEIKQGRLKLDEEVIISENAWRKGG
                     APSRGSTMYAAIHSRVKVDDLIHGIIVDSANDACIALAEALAGNENAFGALLTKRARE
                     LGLEKSTFTNSTGYSDPKLRVTVRELAALSRHIMQTYPEFYPYFAEREFTWNNIRQQN
                     RNPLLAMGIGADGLKTGETSEAGFNLVGSAVEEGFRLIVVVTGAKSEKERAEEARKLL
                     DWGFHGFESKLLFAEGQTVGEARVFGGSTSYVPLVGPGTVRVMIPRNSNERISARIVY
                     TGPVSAPVTKGQFIGKLKVWRGENLALEVPLKAAEDVGPGSMRQRAMDAATELMLGLF
                     RAGVNKL"
     gene            5076..5810
                     /gene="tmk"
                     /locus_tag="VNY79_01520"
     CDS             5076..5810
                     /gene="tmk"
                     /locus_tag="VNY79_01520"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004798 - thymidylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HWX71157.1"
                     /translation="MPDPAASIDAGSTQDVPKEDRTWRGKFITLEGGEGTGKSTQAAI
                     LAQHLQSLGLPVLLTREPGGSPGAEIIRHVLLSGAAEPFGPETEAMLFAAARGDHIRC
                     AIEPALAAGRWVVCDRFADSTRVYQGVLGQVDQRFLNALERVSIGDLSPDLTLILDTP
                     VKVGLERAAARRASAEPDRFESQDLKFHEKLREAFLTLAFDAPERCVIIRANAAKDDV
                     AKRVWQAVDSKLKPAPARAAVKNVAS"
     gene            5807..6841
                     /locus_tag="VNY79_01525"
     CDS             5807..6841
                     /locus_tag="VNY79_01525"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008132145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HWX71158.1"
                     /translation="MSPQPRESIETPHPRATPALFGHAGAESALLAAYRSGRVPHAFL
                     IVGGKGIGKATLAYRMARFVLAHPDPAAAAVKAAISLAVDPQHPVARRIAAQAQGDLL
                     VLERTFNDKGVLRQQISVDDVRRTVSFFGSTAGEGGWRIAIVDAVDELNRSGANALLK
                     VLEEPPQRVLLLLVAHSAARVLPTLRSRCRIVTLRPLPATDVAAALAAATGRSATDVE
                     VTAAAAAADGSVARAAAFLDADALALRQAARDELDRLPALDTDALHALGDALAGTDPQ
                     SLAAFVDTVNAWLSQRLDGNPGEIGRMARLAEAWERINQAARDAETYNLERKPLVFGV
                     FGWLAEATRG"
     gene            6911..8815
                     /gene="metG"
                     /locus_tag="VNY79_01530"
     CDS             6911..8815
                     /gene="metG"
                     /locus_tag="VNY79_01530"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000049 - tRNA binding [Evidence IEA];
                     GO_function: GO:0004825 - methionine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HWX71159.1"
                     /translation="MISKRRQKPKRKNASGKTARQPPRKKKSALKSGSKIGSKAKSGT
                     RKAGPKRTARSTVAPTKDARKKIVPKRTVRSKADAGQTIVEKKKSEPKEPLRKQPART
                     EPHRPIEPQRATGAERKPYYVTTAIAYPNGEPHIGHAYEAIATDAIARFMRLDGRDVF
                     FLTGTDEHGIKMVQTAARENLTPREFTERTVPRFQAMVKMLNCSNDEFIRTTEPRHHA
                     SSVALWERMQANGDIYLDKYAGWYSVRDEAYYDESETRIDDKGQRVGLQGTPVEWVEE
                     ESYFFRLSAYQDKLLALYASDPNYVLPKERLNEVASFVRGGLKDLSISRTTFDWGVKV
                     PGDPRHVMYVWVDALTNYITAVDFPNTGSEKFRRYWPADLHVIGKDIVRFHAVYWPAF
                     LMSAGVAVPRRIFSHGFLFNRGEKMSKSVGNVIDPFALAKAYGVDPLRYFFLREVPFG
                     QDGNYSHEAIVNRINADLANDLGNLAQRSLTMVARNFAGVLPAPGPLSAADQAILAAA
                     DAMIGKAREAMATQQLHQVLNAVWAVVAETNRYFAGEAPWALAKTDPARQGTILYVTA
                     EALRQIAILAQPFVPASAERLLDLLAVPAGERDFSFLGGKHRIAAGRELPAPAPVFPR
                     YVEPEAGAAQ"
     gene            8828..9658
                     /locus_tag="VNY79_01535"
     CDS             8828..9658
                     /locus_tag="VNY79_01535"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009797521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HWX71160.1"
                     /translation="MLIDSHCHLDFPDFAAELDAVVERARGVGIARLVTISTRVARHA
                     AVLAIADRFADVYCSVGTHPHYAHEEPDVTAADLVARTRHPKVVAIGEAGLDYHYDNS
                     PRDAQERGFRTHIAAARASGLPLVIHSRDADADAARILEEETGQGAFPAVLHCFTGGA
                     DLARRAVALGHFISFTGILTFKNSDALRAIAAALPADRILVETDAPYLAPGRFRGKRN
                     EPAYVVETAKVLAETRGVALDELARQTSENFFRLFGKVPRPARADEFDHPPKLDAPAA
                     "
     gene            9655..10461
                     /locus_tag="VNY79_01540"
     CDS             9655..10461
                     /locus_tag="VNY79_01540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012589581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HWX71161.1"
                     /translation="MTLKFTILGCGSSGGVPRPALGWGVCDPNNPKNRRRRTSLLVER
                     RGSDGGLTRVLVDTSPDLREQLLDAEVDWLDGVLYTHEHADHTHGVDDLRALFLHRRR
                     KVDVYLDEPTSQVMRMRFGYCFATPPGSQYPPMLAEHRLTPGEAVSVEGAGGAIAALP
                     IRQEHGDIDSIGFRFGGVAYSCDLSGIPRESVAAFTGLDVWIVDALRYTPHPSHFSLA
                     ETLDWIERLKPRRAILTNLHSDLDYEVLRAKLPAHVEPGFDGLSFTAAAP"
     gene            complement(10613..11272)
                     /locus_tag="VNY79_01545"
     CDS             complement(10613..11272)
                     /locus_tag="VNY79_01545"
                     /EC_number="2.1.1.100"
                     /EC_number="2.1.1.334"
                     /inference="COORDINATES: protein motif:HMM:NF016107.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenylcysteine carboxylmethyltransferase
                     family protein"
                     /protein_id="HWX71162.1"
                     /translation="MPVSAYVQSAIFLILAAVALFAAAGTLAILGFWLYLAILATIVV
                     ASLLSLDPGLLRERMRPGGQRPPLALRLFTIVMFLHWIVAGLDRGRFHWSDGVPSWIQ
                     ASDLIALAAGYVLCFSAMAVNRFFSSVVRIQSDRGQHVVASGPYAYVRHPGYLAGIVI
                     ILASGSALGSWLAALLVIVSSLPFLLYRAITEDRVLQAELPGYADYARRVRWRLVPGI
                     W"
BASE COUNT         2064 a         3793 c         3673 g         1922 t
ORIGIN      
        1 ggcagcaccc gcagatgcgc aagcgtcggc cactccattt aatgacgctg tcgacttagg
       61 cgtcgcgatt ggacgagcga aaggcctcaa cgcagcgaat gccgaggtgg caggtcgcat
      121 cagcctgggg atctttttcg ccgagactaa tggcaagcaa aacatcggga atgcgcgttc
      181 ggatacttac aaggggagct tgcaaacggg tgtgccagaa gatcgaaatg gtcaaagaag
      241 atgggctcgt attaagaacg cgatcgccgc ctttgatccg gtactggtcg cacgcgacga
      301 taaggaggag gcgcggatag gcactttgga tcaccgcttc aaccactgga ctgccgttag
      361 agacggcatc atgaacgccc atgcagacgt gttcccacag ataccggcga tagtgcaagt
      421 tttgccacgc tcgatcgacc aaatgaaact ttttgaactc atccaaatta ttcccagccc
      481 tacgaaatca gcgttacatt ccagcgactt gctcaactat cgaatatcgg accacagaat
      541 aattggatat ttgcgcaaca acaacatctt cgcatttggg aaaaacgatc gctcacggaa
      601 ctccgccacg ttccgcgaaa ttctcgaagc gatgtggctg ttcaatggag tatttgaacg
      661 agcgctcgcc aaattcagcg aagtcaggtc tcaatgaaag cagcagcgga actccgtcgc
      721 caagtgtcag cggccaatcg aaaggcttgg gaaaccaagt cgtcgtctac ctggcgcgca
      781 ggtcgaggcc aggctcgtgc acggttgcgg tgcgccgcgg cagtcgacct cggcaccacc
      841 ggtggaagga gccaaggacc ggcccggcat ggccgtcatg tgacaccgtc acgccaggtg
      901 acgccgtcac atgtggcggc cccgattttt tgtcgacaag cacaccgtcc tcgcggcgcg
      961 gaatgatccg cgtgtggtcg cgtcaagagc tttgccgccg cgcgccggcg ggagggctca
     1021 tcctcgaaat ggatgtatgc cagcgcgggt ccgtcgccgt cgcggacgat ggatcaggct
     1081 tcggtctccg cggcgggcca gggcgccggg aagcggcgct cgggcaggct caaggccttg
     1141 cctccgcggt ccggagcgca tttcggtcgg acaggtcagc aagccccggc cacagcgtgt
     1201 ggtatcctca ggggagctga gccggggccg agagggcgtt aaagcccttt aaccggagct
     1261 ttagtgtggg attgggccca aaagcggata acaagccgcg tggacgccgc tgacagggcc
     1321 ccaacacgag acgcacttgc aacccgcagc tcctgacacg cagtgcgcta ttggccttcc
     1381 ccacaaaaag accgttgcgt gaggatgcac agacagttga acggcgcacc ccatgtgggc
     1441 ccaggcattt gatccgccga aataaataat gcctgataag gcgacggcga aatacaacaa
     1501 caaccgagaa cggcgcatga cctcctcctc tgtctggaaa cgttgccccc catgggcaat
     1561 gtgttgagtt tacatgccag cagggccgcg tccagggcaa tcggcccggc gcggcgtagg
     1621 gacctgccca tttgctgcgg tttccccact cttttttggt gggtaaggct aaagggtccg
     1681 tctcctcggc ggacccggcg cggcggcgtg tgagttgtcg tccatagctc gcatccgcca
     1741 gcagcttctc ctgcgtctgc ttgccgtaat acgttgtcca atcgaaatca gccagttttt
     1801 ccacctttgc ttgcgcgcga tgtttcattt tcccgtgcgt gtcgcgccag cgggaccgga
     1861 cgcttctcca ggaatctgcg gcagatcgtc ggtgatcgta aaccagggag ccttgctggc
     1921 gacgtgcatg tggaccttcg gtcggattcc cggatcgtcg tccagcgcgc cgagcggcaa
     1981 gccaagatag tttgggtgag cgtcgaactt gctcacgatc ggggagccgc acacccggca
     2041 aaaccccctg tgattccccg gcgacgattc atagaaagtg acgcatccct cgccttgcac
     2101 ccattcaaag tcggctgcct tcaaggttgc gcggctgcga aaggcggccc cgtgcgcttt
     2161 gcgacacatc gagcaatgac aattcagggc gtcgaacgga agtccgttga ttcggtattt
     2221 gaccctgccg cacaggcagc ttccgcgtat catgggcgcg ccactcagcc gacgggcaac
     2281 catacgccat cgtaagcggc atgggcggca ggcagccata aaaggttcta cccggccttt
     2341 cgctcccgcc cgccgcagcc tccagggcgt catcggagac ttcgtaggta agcatctctg
     2401 tgtcggattg cacgagcgct gagtcgttca tgacacggcc catcattttg tcggtctttc
     2461 ggttccaact ataacacgcg ccccgcgcgc ccgcgccagt cggcgccaag caactccagc
     2521 agcaggtttc ccggcagtaa cgtcgcagag gatgtcgtcg tcgcgtgagc gctgcgttga
     2581 cgacgatcca ctacggacct gagcaaagcg ggggcagggc gcatccggca agttggttgg
     2641 cgctttggtg ttgggtgcag agggacgtgg gtgcaatgat ccgttcacta tggggagggc
     2701 ttgcccaatt tcgccacaat ctgaccactg tgccgtttga tattttcgcc ggggatcggg
     2761 acgcatgcgg ggtcggatca gcgtggcatt gaaacggttt gcgccggtcg gcgcttgcgc
     2821 cgtgctttgc ctcttcctgg cgcactgctc gaattcgagc aagatcgacc cgcgctacgg
     2881 cgtgtcggcg agcccgcgcg tcgtcgggcc cggcgagccg gtgccgaagg gcggcggcac
     2941 ctaccgggtc ggcgagccct acgtgatcgg cggccgcgtc tatgtcccgg acgagaaccc
     3001 gcgttatcgg gccgaaggtc tggcctcctg gtacggcgac ggtttccatg gccggctgac
     3061 cgccaacggc gaggttttcg acctcaacgg catcaccgcg gcgcatccga ccatgccgct
     3121 gccgagctac gcccgcgtga ccaacctctc caacggccgg tcgctgatcg tgcgcgtcaa
     3181 cgatcgcggg ccgtatcaca gcgaccgcat catggacctc tcggtgagat cggcgcagct
     3241 cctgggtttt catggccgcg gcacggcttg ggtgcgcgtt gaatatgccg ggcgtgcgcc
     3301 gatggaaggc tctgacgacc ggattctgga ggcgtcgctg cggcacgatc acccggcacc
     3361 ggcgaacggc ctggtcagga cggccgcaca aatccggccc gttccgctgc cgccggtttc
     3421 gcccccggcg cagatcacgc ggaccgcgag catctccgcc gctgaggcgg acccttctgc
     3481 ggtgaggcgg gtcgcggtgc gaaccggcat cgacgggact gctcagttcc tcaacggccg
     3541 cgggctctac tgagcctgat ctttccgtcg cccgctgccg ggtcgtcctg gcgtcgaccg
     3601 tcggcgcctc gtcgccttgc ggacgcccta ttgcgcgcca agattcgtcg tcgagattgg
     3661 tcgagattgc atgcttttcc gagcgcatgt ggggcgcgcc ttgtcgacag ttttgcggca
     3721 gagacatccg aacgcggtgc cggcggcgtt tgccgccgtc gccgccggct tgctcgcggc
     3781 cctgattgcc gttgctcacg cggcgccgtc ggcgacggcg acgaagaagg acgaaccctt
     3841 ccacgccaac gttcccgccg cgctcctcct cgatcccgac agcgaaagca tcctctacga
     3901 aaagaacggc gaggagcttg tcgctcccgc gagcctcgcc aagctgatga cgctcgaata
     3961 cgtattcaac gagatcaaac agggccgcct caagctcgac gaggaggtca tcatcagcga
     4021 gaacgcctgg cgcaagggcg gggcgccttc gcgcggctcc accatgtatg cggcgatcca
     4081 cagccgggtg aaggtggacg atctcatcca cggcatcatc gtcgactcgg ccaatgatgc
     4141 ctgcatcgcg ctcgccgaag cgctcgccgg caatgagaac gccttcggcg cactgcttac
     4201 caagcgggcg cgggagctcg ggctggagaa atcgaccttc accaactcga ccggctattc
     4261 ggaccctaaa ttgcgggtca ccgtgcgcga gctggcggcg ctgtcgcggc acatcatgca
     4321 gacctatccc gagttctatc cttattttgc cgagcgcgag ttcacctgga acaacatccg
     4381 gcagcagaac cgcaacccgc tcctggccat gggcatcggc gccgacgggc tcaagaccgg
     4441 cgaaaccagc gaggcgggat tcaatctcgt cggatcggct gtggaggagg ggttccgcct
     4501 gatcgtcgtc gttaccggag cgaagtccga gaaggaacgg gccgaggagg cgcgaaagct
     4561 cctcgactgg ggcttccacg gtttcgagtc gaagctcctc ttcgccgagg ggcagaccgt
     4621 cggcgaggcc agagtcttcg gcggcagcac gagctacgtt ccgctcgtcg ggcccggcac
     4681 cgtgcgggtc atgataccgc gcaacagcaa cgagcggatt tccgcccgca tcgtctacac
     4741 gggtccggtg tccgccccgg tgaccaaggg ccagttcatc ggcaagctca aggtctggcg
     4801 gggcgagaac ctcgccctcg aagtaccgct caaggccgcc gaggatgtgg gccccggcag
     4861 catgcgccaa cgcgccatgg atgcggcgac cgagctgatg ctcggcctgt tccgcgccgg
     4921 cgtgaacaag ctataacagg cttcgcctcc cgcccggcga tcctgcgcga agggccgcgg
     4981 acgactatat ggccgcgtat ccttcgcccg ttcctcggtt gccgttgcgt atgaagacac
     5041 agccgcaacc ccctgcgccg caacgctcaa ccgacatgcc cgatcccgct gcgagcatcg
     5101 atgccggaag cacgcaggac gttcccaaag aggatcgcac ctggagggga aagttcatca
     5161 ccctcgaggg cggcgagggc acgggaaagt cgacccaggc cgcgatactg gcgcagcacc
     5221 tgcaatcgct cggccttccg gtgttgctca cccgcgagcc gggcgggtcg ccgggcgcgg
     5281 agatcatccg ccatgtgctg ctctcgggag cggcagagcc gttcggtccc gagacggagg
     5341 cgatgttgtt cgcggcggcg cgtggggacc atatccgctg cgccatcgag ccggcgctcg
     5401 cggcagggcg ctgggtcgtt tgcgaccgct tcgccgattc cacgcgcgtc taccagggcg
     5461 tcctcggcca ggtcgaccag cgcttcctca atgcgctcga gcgcgtgtcc atcggcgacc
     5521 tcagtcccga cctcaccctg atccttgaca cgccggtcaa ggtcggcctc gaacgggcgg
     5581 cggcgcgccg ggcttccgcc gagcctgacc gcttcgagtc gcaggatctc aagtttcacg
     5641 agaaactgcg cgaggccttt ctgacgcttg cattcgatgc cccggaacgc tgcgtcatca
     5701 tcagggccaa cgcggccaag gacgatgtcg ccaagcgggt gtggcaggcg gtggattcca
     5761 agctcaaacc tgcgcccgca cgcgcggccg tcaaaaacgt ggcgtcatga gtccccagcc
     5821 gcgcgagagc atcgaaacgc cgcatccgcg cgcgacccct gcgctgttcg gccatgctgg
     5881 tgcagagagt gcgctcctcg cggcctaccg cagcgggcgc gttccgcacg ctttcctgat
     5941 cgtcggcggc aagggcatcg gcaaggcgac gctcgcctac cgcatggcgc gcttcgtgct
     6001 cgcccatccc gacccggcgg cggcagcggt caaggcggcg atttcgctgg ccgtcgaccc
     6061 gcagcatccg gtcgcgcgcc gaatcgcggc gcaggcgcag ggcgacctgc tcgttctcga
     6121 acgcacgttc aacgacaaag gcgtgctgcg ccagcagatc tccgtcgacg acgtgcgtcg
     6181 cacggtctcg ttcttcggct cgacggccgg ggagggggga tggcgcatcg ccatcgttga
     6241 tgccgtcgac gaactcaacc ggtcgggcgc caatgcgctg ctcaaggtgc tggaagagcc
     6301 gccgcagcgg gtcttgctgc tgctcgtcgc ccattccgcg gcgcgggtgc tgccgacgct
     6361 gcgctcgcgc tgccgcattg ttacgttgcg gccgctcccg gcgaccgacg ttgctgcggc
     6421 gctggcagcc gcaacggggc gctccgcgac cgacgtagag gtcacagcgg ccgcagccgc
     6481 cgcggacggc agcgtcgctc gcgccgccgc ctttctcgac gcggatgcat tggcgcttcg
     6541 ccaggcggcg cgtgacgaac tcgaccggct gccggcgctc gacaccgacg cgctgcacgc
     6601 gctcggcgat gcgctcgccg gaaccgaccc gcagtcgctc gccgccttcg tcgacacggt
     6661 gaatgcgtgg ctgtcgcaac gcctcgacgg caacccgggc gaaatcggcc gcatggcgcg
     6721 gctcgccgag gcgtgggagc ggatcaatca ggccgcgcgc gacgccgaga cctacaatct
     6781 ggaaagaaaa cctctggtgt tcggcgtttt cggctggctt gccgaggcca cgcgcggttg
     6841 atacctgtcc tcgtggccgg gctcgtcccg gccatccctg tctttgatcg tagattggcg
     6901 gcgttagccc atgatttcca agcgcagaca aaagcctaaa cggaagaacg cgagcggcaa
     6961 gaccgcgcgg cagcctccgc ggaagaagaa atccgcgctg aagagcggca gcaagatcgg
     7021 atcgaaggcg aaaagcggga ccagaaaggc tggacccaag cgaacggcgc gcagcacggt
     7081 cgcgccgacg aaggacgcgc gcaagaaaat cgtgcccaag aggacggtgc gcagcaaggc
     7141 cgatgcgggg cagacgatcg tcgagaaaaa gaaaagcgag ccgaaagaac cgctgcggaa
     7201 acagcctgcg cgcacagaac ctcaccgacc gatcgagccg caacgcgcga cgggggctga
     7261 gcgcaagcct tattacgtca ccaccgccat cgcttatccc aacggcgagc cgcatatcgg
     7321 ccatgcctac gaggcgatcg ccaccgacgc catcgcccgt ttcatgcgcc tcgacggccg
     7381 cgacgtgttc tttctcaccg gcaccgacga gcacggcatc aagatggtgc agaccgctgc
     7441 cagggagaac ctgacgccgc gcgagttcac cgagcgcacc gtgccgcgct tccaggccat
     7501 ggtgaagatg ctcaactgct cgaacgacga gttcatccgc accaccgagc cgcgccacca
     7561 cgcctcttcg gtcgcgcttt gggagcgcat gcaggcgaac ggcgacatct acctcgacaa
     7621 atacgccggc tggtattcgg tgcgcgatga agcctactac gacgagagcg agacgcgcat
     7681 cgacgacaag gggcagcgcg tcggcctcca gggcacgccg gtcgaatggg tcgaggagga
     7741 gagctatttc ttccgcctgt ccgcctatca ggacaagctc ctcgccctct acgcgagcga
     7801 cccgaactac gtgctgccga aggagcgcct caacgaggtc gcaagcttcg tgcgcggcgg
     7861 cctgaaggat ctgtcgatct cgcgcacgac cttcgactgg ggcgtcaagg tgccgggcga
     7921 tccccggcac gtgatgtacg tgtgggttga cgcgctcacc aactacatca ccgccgtcga
     7981 ctttcccaac accggcagcg agaaattccg ccgctattgg ccggccgacc tgcacgtgat
     8041 cggcaaggac atcgtgcgct tccacgcggt gtactggccg gcgttcctca tgtcggccgg
     8101 tgtcgccgtg ccgcgccgta tcttctccca cggctttctg ttcaaccgcg gcgagaagat
     8161 gtcgaagtcg gtcggcaacg tcatcgatcc gtttgcgctc gccaaggcct acggcgtcga
     8221 tccgctgcgc tatttcttcc tgcgcgaggt gccgttcggg caggacggca actacagcca
     8281 cgaggcgatc gtcaaccgca tcaacgccga tctcgccaac gatctcggca atctggcgca
     8341 gcgctcgctg accatggtgg cgcgcaattt cgccggcgtg ctgcccgcgc cggggccgct
     8401 gagtgcggcc gaccaggcga ttcttgccgc cgctgacgcc atgatcggca aggcgcgcga
     8461 ggcgatggcg acgcagcaat tgcaccaggt gctcaatgcg gtatgggccg tggtcgccga
     8521 gacgaaccgc tatttcgccg gcgaggcgcc gtgggcgctc gccaagaccg acccggcacg
     8581 gcagggcacc atcctctatg tgaccgcgga ggcgttgcgg cagatcgcga tcctggcgca
     8641 gccgttcgtg ccagcctcag cggagaggct gctcgatctt ctggcggtgc ccgccggcga
     8701 acgcgacttc tccttcctcg gcggcaagca ccgcatcgcc gccggccgcg aattgccggc
     8761 gccggcgccg gtctttcccc gctatgtcga gccggaagcc ggagcggcgc aatagatcgc
     8821 aaccaaaatg ctgatcgaca gccattgcca tctcgatttc ccggattttg ccgcggagct
     8881 agatgccgtg gtcgagagag cgcgcggcgt cggcatcgcg cgcctggtca ccatctcgac
     8941 gcgtgtcgcc cgtcacgccg ccgtgctggc gatcgccgat cgctttgccg acgtctattg
     9001 ctcggtcggc acgcatccgc actacgcgca cgaggaaccg gacgtgaccg cggccgacct
     9061 tgtcgcgcgc acacggcatc cgaaggtcgt cgcgatcggc gaagccggcc tcgactatca
     9121 ctacgacaac tcgccgcgcg acgcgcagga gcggggattt cgcacccaca tcgccgcggc
     9181 gcgcgcgagc gggctgccgc tcgtgatcca ctcgcgcgac gccgacgccg acgccgcgcg
     9241 cattctcgaa gaggaaacgg ggcagggcgc cttccccgct gtcctgcatt gttttaccgg
     9301 tggggccgat ctcgcccgcc gggctgtcgc gctcgggcac ttcatttcct tcaccggcat
     9361 tttgaccttc aagaattcag acgcgctgcg cgccattgcc gcggcgctgc ccgccgaccg
     9421 cattctcgtc gagaccgacg ccccctatct cgcgcccggc cgtttccgcg gcaagcgcaa
     9481 cgagccggcc tatgtggtcg agaccgccaa ggtcttggcc gagacccgcg gcgttgcgct
     9541 cgatgagctc gcgcgccaga cctcggagaa tttctttcgc ctgttcggca aggtgccgcg
     9601 gccggcccgc gcggatgagt tcgatcatcc gccaaagctt gatgctcccg ccgcatgacg
     9661 ctgaagttca ccatcctcgg ctgcgggtca tcaggcggcg tcccgcggcc ggcgctgggc
     9721 tggggcgtgt gcgatccgaa caatccgaag aaccgccgcc ggcgcacgtc gctgctcgtc
     9781 gagcgccgcg gcagcgacgg cgggctcacg cgggtgctgg tcgacacgtc gcccgacctg
     9841 cgcgagcaac tcctcgacgc cgaggtcgat tggctcgacg gcgtcctcta cacccacgag
     9901 catgccgacc atactcacgg cgtcgacgac ctccgcgcgc tctttttgca tcggcgccgc
     9961 aaggtcgacg tctacctcga cgagcccacg tcgcaggtca tgcgcatgcg cttcggctat
    10021 tgtttcgcaa cgccgcccgg gagccagtat ccgccgatgc tggccgagca ccggctgacg
    10081 ccgggggaag cggtcagcgt cgaaggcgcc gggggagcga tcgccgcctt gccgatccgg
    10141 caggagcacg gcgatatcga ctcgatcggt ttccgcttcg gcggcgtcgc gtattcgtgt
    10201 gacctcagcg gcatcccgcg ggagagcgtg gcggcgttca ccggcctcga cgtgtggatc
    10261 gtcgacgcgc tgcgctacac gccgcacccg agccatttct cgctcgccga aacgctcgac
    10321 tggatcgagc ggctcaagcc gcgccgcgcc atcctcacca atctgcattc cgacctcgac
    10381 tacgaggtgc tgcgcgccaa gctgccggcg cacgtcgagc cgggcttcga cggcctgagt
    10441 tttactgccg cggctccgta gccgcgcaat cggcgaagat aggcggcatt ttacctaaat
    10501 ttgcggctgg gtccgtcaag tgaaacatcg cccctatatg ttccataata tctcttatgc
    10561 gaatcacctt agtgacgtgg atgcgctggg agcggcaaat ccctgctctg cctcaccaaa
    10621 tgccgggtac caggcgccag cggacgcggc gtgcgtagtc ggcatagccg ggcaattccg
    10681 cctggagcac gcgatcttcg gtgatggcgc ggtaaagcaa gaacggcagg ctcgaaacaa
    10741 tcaccagcag cgcggcaagc cacgatccga gcgccgagcc gctggcgaga atgatcacga
    10801 tgcccgcgag gtagcccggg tgccgcacgt aggcgtacgg cccgctcgcg accacgtgct
    10861 ggccgcggtc ggactgaatg cgcacgaccg aggagaagaa gcggttgacg gccatcgccg
    10921 agaagcacag cacgtatccg gccgcgagcg cgatcaggtc gctggcctgt atccatgacg
    10981 gaacgccatc gctccaatga aagcggccgc ggtcgagccc cgccacgatc cagtgcagaa
    11041 acatgacaat ggtgaacagg cgcagtgcca agggcggccg ctgtccgcca ggacgcatgc
    11101 gctcgcgcag caggccggga tcgagcgaca gaagcgaggc cacgacgatg gtggccagga
    11161 tcgcgaggta gagccagaag ccgaggatcg caagggtgcc ggcggcggca aacaacgcca
    11221 ccgccgccag aatgaggaag attgccgact gcacgtaagc cgaaactggc atggtccttc
    11281 ccgttgcgaa caggtacccg cgccgcaagg gcggcgtgga accaaagatg ttgcggcgac
    11341 gttcaatggc aagccggccc ggctgtggag tttgggcggc cggaccttct tgtcttcagc
    11401 ctccaaccca ggatgaccgc cgtgagcaaa gtcagagccc tcgatacgca cc
//
LOCUS       DATMQB010000044        11328 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_630682, whole genome shotgun sequence.
ACCESSION   DATMQB010000044 DATMQB010000000
VERSION     DATMQB010000044.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11328)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11328)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11328
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_630682"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(407..757)
                     /locus_tag="VNY79_01550"
     CDS             complement(407..757)
                     /locus_tag="VNY79_01550"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71163.1"
                     /translation="MRIDLSRPIPGLLMALPLIAILLSVSRVPISATQPLSRAKEAAI
                     EMTGTAIACAPDVGGQTDRGMAARLDDGGDRWNSLALVGEQKWHNRPEAAIGCEVLVS
                     CQPRSIVRRFAVYD"
     gene            1452..2654
                     /locus_tag="VNY79_01555"
     CDS             1452..2654
                     /locus_tag="VNY79_01555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HWX71164.1"
                     /translation="MKLHWMAFGAALAGLWSAPALAADSGPVKIALIADKTGPLEAYA
                     KQTSAGFAMGLAYATGGTMEVAGRKLVVIEKDSQTKPDVGRNLLNEAYNDDGADIAVG
                     GTSSAVALAMLPVAQDNKKVFVVEPAVADSITGDKWNRYIFRTSRNSTQDAVSNALAI
                     GKPGTSVATLAQDYAFGRDFVTAFRTALAPTGAKLVFEEYAPPATTDFTASYQRIFDA
                     LAKEQGRKIIFLNWAGGGNPMSALKALDPERLGISVSTGGNILPALAAYKDFPGLEGA
                     AHYYYEIPKNPVNDWLVAENKKRFNGAPPDFFTCGGFIAAQAVVEALKKTNGSTDAEK
                     LIATMEGMSFDSPKGQVTFRKEDHQLLQPMYAFKIKVDPGVAWAIPELTRVISIDEMK
                     IPVKNVRQ"
     gene            2719..3501
                     /locus_tag="VNY79_01560"
     CDS             2719..3501
                     /locus_tag="VNY79_01560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX71165.1"
                     /translation="MPALATRDLTISFGGQVAVNAVTCTFRQGTLTAIVGPNGAGKTT
                     YFNLISGQLQPSNGSVSLFGADITRFGAPQRARRGLGRAFQLTNLYPNLSVFENVRLA
                     VQSVAQIRFDLVSIAARNARLREEAVHWLDRVKLTPRAALPAAALSHGDQRKLEVAIL
                     LALKPRVFMFDEPTAGMSLDEVPVILDLIDEIKLEGDKTVLLVEHRMDVIKRLADRIV
                     VLQDGAMIADGPPAEVVALPAVQQAYLGMQTGAKPRHRAGHG"
     gene            3494..4228
                     /locus_tag="VNY79_01565"
     CDS             3494..4228
                     /locus_tag="VNY79_01565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008135547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX71166.1"
                     /translation="MADAGEALLRLDGVYTDIGRYQILYGVDLTVRRGGVTMLLGRNG
                     AGKTTTLRTIMGLWKARAGAITFDGRSIASMETPDIARLGIAYVPENMGIFGKLTVRE
                     NMLLATGAQGFAKDHLDRVLAFFPALKLKWEAAAGSLSGGQKQMLAIGRAIVEPRRLL
                     LVDEPTKGLSPAMVDQLVEALLRMKKEQTTILLVEQNFRVALAMGDDVAVMDQGRIVH
                     SGSTAALGNDEELQQRLLGLSMAVGA"
     gene            4225..5217
                     /locus_tag="VNY79_01570"
     CDS             4225..5217
                     /locus_tag="VNY79_01570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX71167.1"
                     /translation="MSKEWQERLQYWAPYAVMPLLVLAVLPAMGLTAWVTLTVAGLTM
                     GMMLFLVASGLTLIFGLMEVLNFAHAAFVTVGAYVTVSVLRPLGGWTADPSLTLNLAA
                     LLVALVAAAAASGALGYVFERIIIRQVYGAPLRQILITIGALTVIEQLVIVVWGPEAI
                     PLPKPASLRGSIFLGASSIETYRLFALFVGLAVAAAMHLVLTRTRIGLVVRAGVEDRE
                     MVQALGYRIRRVFVGVFIAGTALAGMGGMMWGQYQTLVTSQIGDGMIILVFIILIIGG
                     LGSVGGCFIGAILVGLTSNYVGFLAPKLALGSNILLMALILLWRPRGLFPVAGH"
     gene            5225..6379
                     /locus_tag="VNY79_01575"
     CDS             5225..6379
                     /locus_tag="VNY79_01575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX71168.1"
                     /translation="MAPGLRDIPEGTNGAASGVSTSDRDGSRHGKSWVGWFVSDDPPG
                     RLLLNVIMLVVLAAFVFAPFLFPGTKALGVASRICIFVILVASYDLMLGYTGIVSFAH
                     TMFFGIGAYGVAILLAKGWVGWGAVIVGAGAGAAVSLVVAVAIGLLSLRVRAIFFSMI
                     TLAVASFALILAEQWRDLTGGEDGLTFSVPAILKPGFRLFADPVLGVTFNGRVITYYL
                     IFIVSLVLFLLMLRIVNSPFGRVLQAIRENEFRVEAMGYQVVAYRTIVSALSAVMAAL
                     AGALMALLLGYNGPDATLSFSLMIDILLMIVIGGMGTMYGAVIGAVLVVLAEYYLQNI
                     LGAVHGVLPDVPLISALFHPERWLLWLGVLFVLIVTFFPQGIFGWLRHRR"
     gene            complement(6440..7411)
                     /locus_tag="VNY79_01580"
     CDS             complement(6440..7411)
                     /locus_tag="VNY79_01580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HWX71169.1"
                     /translation="MPTRRAMLLGGIAMGVAMRGGSALANASQPATAVNFDLPSGACD
                     CHTHIFGDPQKFPFFAGRVYTPEPASPEEMAALHKSLHIERVVIVTPSVYGTDNSATL
                     YGMKARGATARGVAVIDDKTPESELDAMNAAGIRGIRINLATGGITDPAVARLRLQAA
                     IDRAKGHNWHVQIYSNLPVIAALKSELAQSPVPLVLDHFAGAQAALGVDQPGFADVVE
                     LVRNGKTYVKISGAYRASKAAPDYADVLPFAKALIAANPDRLVWGTDWPHPDAVTPPG
                     KKPTDVTPLLQIDDGRLLNLLAVWTPDAAIRQRILVANPARLYGFDA"
     gene            complement(7532..7901)
                     /locus_tag="VNY79_01585"
                     /pseudo
     CDS             complement(7532..7901)
                     /locus_tag="VNY79_01585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016734003.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
     gene            complement(7934..8422)
                     /locus_tag="VNY79_01590"
     CDS             complement(7934..8422)
                     /locus_tag="VNY79_01590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013895294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71170.1"
                     /translation="MTNSFIGALQSGGPASDRADKMTPYGGLIGQWTMDAVVHRDDGS
                     QHRGPGEIHFGWVLEGRAIQDVWILPGVFYGTTLRAYDPGIDAWHILWSDPVRQFYSR
                     QIGRARDSDIVQLGKNDAGETVRWSFTEITPDSFRWTGERSRDDGKTWQLQADFRARR
                     KS"
     gene            8510..9334
                     /locus_tag="VNY79_01595"
     CDS             8510..9334
                     /locus_tag="VNY79_01595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013531830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HWX71171.1"
                     /translation="MGLTANVLASGSGWRVQDVVCTFGPHDRPFAERHHGVCVAAVTE
                     GTFQYRSTLGSAVLAPGALLLGNDHHAFECRHEHGTGDRCLSFRLTPEFLEGVVAAIP
                     GVRRAVFSAPLLPPQSGLLPIIAAAEAAREDADTAAFEEVALRLAGAVAAVLAGTKGR
                     PPAPSRRHERQITAALRRIEAQAGEPLSLADLAHEAAMSPYHLLRSFRALVGMTPDQF
                     ILHTRLNRAAVRLRRTADSISAIAFAAGFNDLSTFNRRFQRIMGLSPSAYRASSPR"
     gene            9602..10003
                     /locus_tag="VNY79_01600"
     CDS             9602..10003
                     /locus_tag="VNY79_01600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HWX71172.1"
                     /translation="MDNLKGYLAPLGRLLMSSLFIWAGYHKLINPGGTAQYFANAHVP
                     IPDVSVWIGVIIELIGGLLILVGFQTRWVALVLAIFCLATGFGVHLPAGDLPNMINFY
                     KNLVMAGGFLYVAAYGPGGISVDHATGMEKA"
     gene            10200..10463
                     /locus_tag="VNY79_01605"
     CDS             10200..10463
                     /locus_tag="VNY79_01605"
                     /inference="COORDINATES: protein motif:HMM:NF018894.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0035438 - cyclic-di-GMP binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PilZ domain-containing protein"
                     /protein_id="HWX71173.1"
                     /translation="MKRTRVLRCAKIIVPRRSPVIHCTVQNITGGGACLKLANTYGVP
                     QTFDLTFEHGRTRRACRVVWRTDTKLGVTFEPQAPPAKGSTGR"
     gene            complement(10506..11282)
                     /locus_tag="VNY79_01610"
     CDS             complement(10506..11282)
                     /locus_tag="VNY79_01610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HWX71174.1"
                     /translation="MDDNSLKFLEIGTGAERRALAIRAREGALPGLFWLSGYKSDMKG
                     TKAAALAHWAKQAGRACVRFDYSGHGESGGAFTDGTIGRWLADSLAVFDACCRGPQIV
                     VGSSMGGWLALLMVRTLRARGQNGPGTVAGMVLIAPAVDFTEELMWKRFSPAIRQELE
                     ENGVWARPSAYAPEPYLVTRQLIEEGRKHLILGNMIETGCPVRILQGVEDPDVPWRHA
                     VELVSRLASDDVVLTLVKDGDHRLSRPEDIERLIAAVTEF"
BASE COUNT         1815 a         3686 c         3707 g         2120 t
ORIGIN      
        1 ggcccgcacc gatccgttcg gcgagacgcg tccggaaagg ccgttgccgg cagtaatgcc
       61 tgcgaccacc atgactccgt tggcaacctc gacggcgccg cgatacgcgg gctggcacgg
      121 tccggattgt gttctcaaca ccgcgctcca ccggccatcg aaccggctcc ccgcatttgc
      181 gcccggcgca gcggcaacgg tcgcagccgt gcagaggctt gccagcatga gcagacgaac
      241 agttcggctt gacatgcgaa ccctctttcc tcgctgttcg tttctagcac aagcacaaaa
      301 taccctgcag tgacgatctt tccggaagcg gcatgtctcg aggctcgtgg cgacgagcga
      361 ccggcgagag ggttacggta tcgcgtgccc gatacgccct gcgctttcaa tcgtagacgg
      421 caaagcgccg cacaatggag cggggctggc agctgaccag gacttcacaa ccaatcgccg
      481 cctccggccg attgtgccat ttctgctcgc cgaccaaggc aagagaattc cagcggtcgc
      541 cgccatcatc aagccgcgcg gccatccctc ggtcggtttg tccaccgacg tccggcgcgc
      601 acgcgatggc ggtgccggtc atctcgatcg ctgcctcctt ggctcgggac agcggctgcg
      661 tagcggagat tggtacgcgg ctgacgctca gcaggatggc gatgagcggg agagccatga
      721 gcaatccggg tataggtcgc gagagatcga tgcgcatgat cccctcaccg tttgatcggc
      781 cctacatagt tcaatcgccg ccgtcggtgc gggttgcttg cgaggttagt taaggaagct
      841 cagccggcat tcgcgaccgg ctgcgtcgaa atcatggctc ctgcgcggtg ctttgtcggc
      901 gcgccgttcg cgtcgccgat tgcatcgcgt gcacccattt ttgatcgtcc atccgcttga
      961 tgcggcggcc aaaagcgccc gagccccttc cgctttccgc ttgggccgcg cgccagcagt
     1021 ctcgcccaat tctcgcccag ttgtcctcct ctgccgccgc gtagcggcac aagaacacat
     1081 taggtgccgc aggggggtgc tctgcacggc gcgcaacacg cgcgaaggcg gccattggag
     1141 aagcgcacgc tcgcgagact cctttgcgcc gggcgcaaag cggagacctc cgcgtcggtt
     1201 ggcgcgtccg gttcgcgctg cgacatgttc gcgccgagtc cggccacgcc ggtggccgcc
     1261 ccgtcagcgc gagtttccag atgtcggtcg ccgttgagcg gcagcgcgcg tgctgatcca
     1321 ggtcatgttg cgccccatag cggaacgcga tagtcaatat ttttaagaaa tacgcacggg
     1381 gcggcgcaga cttcggctcg tctcgcaagc atcaatcgct tcgcgggcct gccgaggacc
     1441 aggagaatat tatgaaactg cattggatgg ccttcggcgc ggcccttgcc ggtctttgga
     1501 gcgcgcccgc gctcgcggct gacagcggtc cggtcaagat cgccctcatc gccgacaaga
     1561 cggggccgct cgaagcgtac gccaaacaaa catcggctgg tttcgccatg ggcctcgctt
     1621 atgcgaccgg cggcaccatg gaggtcgccg gccgcaagct ggtggtgatc gagaaggaca
     1681 gccagaccaa gccggatgtc ggccgcaacc tgctcaacga ggcgtacaac gacgacggcg
     1741 ccgacatcgc cgtcggcggc acgagttcgg cggtggcgct ggccatgctg ccggtcgcgc
     1801 aggacaacaa gaaggtcttc gtcgtcgagc cggcagtcgc cgattcgatc accggcgata
     1861 aatggaaccg ctatatcttc cgcacctccc gcaactcgac ccaggatgcg gtgtcgaatg
     1921 cgctggccat cggcaaaccc ggcacgtcgg tggcgactct cgcccaggac tacgcgttcg
     1981 gccgcgattt tgtcaccgca ttccgcaccg cgctcgctcc gaccggcgcc aagctcgtgt
     2041 tcgaggaata tgcgccgccg gccacgaccg acttcaccgc gtcgtatcag cgcatctttg
     2101 acgcgctcgc caaggagcag ggccgcaaga tcatctttct caactgggcc ggcggcggca
     2161 acccgatgtc ggcgctcaag gcgctcgatc ccgaacgatt gggaatctcg gtctcgaccg
     2221 gcggcaacat tctgccggcg ctcgccgcct acaaggattt tcccggcttg gaaggtgccg
     2281 cgcactacta ctatgagatc cccaagaatc cggtgaatga ctggctggtg gcggagaaca
     2341 agaagcggtt caacggcgcg ccgccggatt tcttcacctg cggcggcttc atcgccgctc
     2401 aggccgtggt cgaagcgctg aagaagacca acggctcgac cgacgcggaa aagctgatcg
     2461 ccaccatgga aggcatgtcg ttcgactcgc cgaaaggcca ggtgaccttc cgcaaggaag
     2521 accatcagct gctgcagccg atgtatgcct tcaagatcaa ggtcgatccc ggcgtcgcct
     2581 gggcgatccc cgagctcacg cgcgtgatct cgatcgacga gatgaagata ccggtcaaga
     2641 acgtccgcca atagggcagg cgggatctga cagaggggtc atcggactcg tggacagggt
     2701 cgcggaatga acgacgatat ccccgccctg gccacccgcg atctgaccat cagcttcggc
     2761 gggcaggtcg ccgtcaatgc agtgacctgc acttttcgtc agggcacgct caccgcgatc
     2821 gtcggtccca acggcgccgg caagaccacc tacttcaatc tgatctccgg gcagctgcag
     2881 ccgtcgaacg gcagcgtcag cctgttcggc gccgacatca cccggttcgg cgcgccgcag
     2941 cgcgcccgcc gcggtcttgg ccgcgcgttc cagctcacca atctctaccc caacctcagt
     3001 gttttcgaga acgtgcgcct cgcggtgcag tccgtcgccc agatccggtt cgatcttgtc
     3061 agcattgccg cgcgcaacgc acggctgcgc gaggaggcgg tgcactggct ggatcgggtc
     3121 aagctcaccc cgcgagcggc tcttccggcg gcggcgctat cgcacggcga tcagcgcaag
     3181 ctcgaggtcg cgatcctcct ggcgctgaag ccgcgggtct tcatgttcga cgaaccgacc
     3241 gcgggcatga gcctcgacga ggtgccggtg atcctcgacc tcatcgatga gataaagctg
     3301 gagggtgaca agaccgtgct cctggtcgag caccgcatgg acgtgatcaa gcggctcgcc
     3361 gatcgcatcg tcgtgctgca ggacggcgcg atgatcgcgg acggcccgcc ggccgaggtg
     3421 gtggcattgc cggcggtgca gcaggcctat ctcggcatgc agacgggcgc aaagccgcgg
     3481 cacagggccg gccatggctg acgccggcga agcgctgctg cggctcgatg gcgtctacac
     3541 cgacatcgga cgctaccaga ttctctacgg cgtcgacctg acggtgcggc gcggcggggt
     3601 cacgatgctg ctcggacgca acggcgccgg taagacgacg acgctgcgca ccatcatggg
     3661 tctgtggaag gcgcgtgccg gggcgatcac cttcgatgga cggtcgatcg ccagcatgga
     3721 gacgcccgac atcgcgcgcc tggggatcgc ctacgtgccg gagaacatgg gcatcttcgg
     3781 caagctgacg gtgcgcgaga acatgctgct cgccaccggc gcgcaagggt tcgccaagga
     3841 ccatctcgac cgcgtgctcg cgttctttcc ggcgctgaaa ttgaaatggg aggcggcggc
     3901 gggttcgctg tccggcgggc agaagcagat gctggcgatc ggacgcgcca tcgtcgagcc
     3961 gcggcggctg ttgctggtgg acgagccgac caagggtttg tcgccggcga tggtcgatca
     4021 gctggtcgaa gcgctgctgc gaatgaagaa ggagcagacc acgatcctgc tggtggagca
     4081 gaattttcgc gtggcgctcg cgatgggcga cgatgtcgcg gtgatggacc aggggcgcat
     4141 cgtccacagc ggctccacgg cggcgctcgg caacgacgag gagctgcagc aacggttgct
     4201 cggcctgagc atggcggtcg gcgcatgagc aaggagtggc aggagcggtt gcagtattgg
     4261 gcgccctatg cggtgatgcc gctgctcgtg ctcgcggtct tgccggcgat ggggcttacc
     4321 gcctgggtca cgctgacggt cgccgggctc accatgggca tgatgctctt tctggtggcg
     4381 tccgggctca ccctgatctt cggcctcatg gaggtgctga acttcgcgca cgcggccttc
     4441 gtgaccgtcg gcgcctatgt cacagtctca gtgctgcggc cacttggcgg ctggaccgcc
     4501 gacccgtcgc tgacgctcaa tctagccgcg ctgctggtgg cgctcgtcgc cgccgctgcc
     4561 gcgagcggcg cgctcggcta cgtgttcgag cgcatcatca tccgccaggt ctacggcgca
     4621 ccgctgcgcc agattctgat caccatcggc gcgctcaccg tgatcgagca actggtgatc
     4681 gtcgtgtggg gaccggaagc gattccgctg cccaagccgg cgagcctgcg cggcagcatc
     4741 ttcctcggcg cttcctcgat cgaaacctac cgcctgttcg cgctgttcgt cggcctcgcc
     4801 gtcgccgcgg cgatgcatct ggtgctgacg cgcacccgca tcgggctggt ggtgcgcgcc
     4861 ggcgtcgagg accgcgagat ggtgcaggct ttgggctacc gcatccgccg cgtgttcgtc
     4921 ggcgtgttca tcgccggcac cgcgctcgcc ggcatgggcg ggatgatgtg gggccagtat
     4981 cagaccctcg tcaccagcca gatcggcgac ggcatgatca ttctcgtgtt catcatcctg
     5041 atcatcggcg ggctgggctc ggtcgggggc tgcttcatcg gcgccatcct cgtcggcttg
     5101 acgagcaact atgtcggttt cctggcgccc aagttggcgc tgggatcgaa catcctgctg
     5161 atggcgctca ttctgctctg gcggccgcgc ggattgttcc cggtggccgg gcactgaggc
     5221 ggcgatggcg cccggtctgc gcgacattcc ggaaggcacg aacggcgcag cgtccggcgt
     5281 ctccacgtcc gatcgggacg gcagtcggca cggcaaatca tgggtgggct ggttcgtctc
     5341 cgatgatccg ccgggccgct tgctgctgaa cgtgatcatg ctcgtcgtat tggccgcctt
     5401 tgtgttcgcg cccttcctgt tccccggcac caaggcgctg ggggtcgcct cgcgcatctg
     5461 catcttcgtg atcctggtgg cgagctacga cctcatgctc ggctacaccg gcatcgtctc
     5521 gttcgcgcat acgatgttct tcggcatcgg cgcctatggc gtggccattc tgctcgccaa
     5581 aggctgggtc ggctgggggg cggtgatcgt gggcgccggg gccggcgccg ccgtctccct
     5641 ggtcgtggcg gtcgcgatcg gacttctgag cctgcgcgtg cgcgcgatct tcttttcgat
     5701 gatcacgctc gcggtggcga gcttcgccct catcctcgcg gagcaatggc gcgacctcac
     5761 cggcggcgag gacggcctga ccttctcggt gccggcgatt ctcaagcccg gctttcgttt
     5821 gttcgccgat ccggtcctcg gcgtgacctt caacggaagg gtgatcacct actacctcat
     5881 cttcatcgtg tcgctggtgc tgtttctcct catgctgcgg atcgtcaact cgccgttcgg
     5941 tcgcgtgctc caggcgatcc gcgagaacga gttccgggtc gaggcgatgg ggtatcaggt
     6001 cgtcgcctac cgcaccatcg tctccgcctt gtccgcggtc atggcggcgc tcgccggcgc
     6061 gctgatggcc ttgctgctcg gctacaacgg gccggacgcg accctgtcat tctcgctgat
     6121 gatcgacatc ctgctgatga tcgtgatcgg cggcatgggc acgatgtatg gcgcggtcat
     6181 cggcgccgtc ctggtggtgc tggccgaata ttatctgcag aacattctcg gcgcggtcca
     6241 cggcgtcctt ccggacgtgc cgctgatttc ggcgctcttc catccggagc gctggctgct
     6301 gtggctcggc gtgttgttcg tgctcatcgt gacgttcttc ccgcagggaa ttttcggctg
     6361 gctccgccat cgccgctaat gtgtgatgaa ttcagttcga aattgatagt tcgtcatggc
     6421 cggacttgtt gtcccgtcac taagcgtcga agccgtaaag ccgcgccgga ttggccacca
     6481 ggatcctttg gcggatcgcc gcgtcgggcg tccagaccgc gagcaggttc aacagtcggc
     6541 cgtcgtcgat ctgcaggagc ggcgtgacgt cggtcggctt ctttcccggc ggcgtgaccg
     6601 cgtcgggatg cggccagtcg gtgccccaca cgagccggtc gggattggca gcgatcagcg
     6661 ccttggcgaa cggaaggaca tcggcgtaat cgggcgcggc ctttgacgcc cgataggcgc
     6721 cggaaatctt gacgtaggtt ttgccgtttc tgacgagctc gacaacgtcc gcaaaacccg
     6781 gctggtcgac gccgagcgcg gcctgagcac cggcgaaatg atcgagcacc agcggcaccg
     6841 gcgattgcgc gagttcactc ttcagcgccg cgatcaccgg gaggttcgaa tagatctgca
     6901 cgtgccaatt gtgccccttc gcccgatcga tcgcggcctg caggcgcaga cgtgcgaccg
     6961 cggggtcggt gatgccgccg gtcgccagat tgatcctgat gccgcggatg ccggccgcat
     7021 tcatggcgtc gagctcgctc tccggcgtct tgtcatcgat gaccgcgacg ccgcgggcgg
     7081 tggcgccgcg cgccttcatg ccgtagagcg tcgccgaatt gtcggtgccg tagacgctcg
     7141 gcgtcacgat caccacgcgc tcgatgtgaa ggctcttgtg cagcgccgcc atctcctcgg
     7201 gcgacgccgg ctccggcgta tacacgcgtc cggcaaagaa cgggaatttc tgcgggtcgc
     7261 cgaaaatgtg ggtatggcaa tcgcacgcgc cggaaggcag gtcgaaattc accgccgtcg
     7321 ccggctgcga ggcgttcgcc aatgccgatc cgccgcgcat ggcgactccc atcgcgatac
     7381 cgccgagcaa catagcgcgt cgtgttggca tggagtcctc cctgccgagg tcgcgtcgcc
     7441 cgcgcctgct gatccatgcg ccgcgttctg cctcggagcc gggagcttat caccctgggc
     7501 gccaaggcag aacttcaact ccggccgcgg ctcacgcggc ggattgatcg caatgggcct
     7561 cgatccggta gccgtcggga tcgatgacga aggccgcgta atagctcggc gcgcaggccg
     7621 ggcatgccgt tgtcttgtcc tccggtggcg agcgcggcgg cgtggaatgc gtccacgctc
     7681 tttgccgtcg gagccgtgaa gcagaagtgc aggccggatg gcatatcggg cggcaccgga
     7741 tgcgccgccg cactgatcca gaacgcgacc gttccgcgcc cgtagcccag cgagtcattg
     7801 ccctcgctga ggcactgata gccgagcggt tttaatgcgg cgtcatagaa gcgcttggtc
     7861 ttggcgacat cgcggaagcc gatcgagaca tggtcgatca tcttgtttgc tcctcaggaa
     7921 tggggtggaa gggtcatgac ttgcgccgcg cgcggaagtc ggcctgcagt tgccaagtct
     7981 tgccgtcatc gcgggaacgt tcgccggtcc agcggaacga atcgggcgtg atctcggtga
     8041 agctccagcg cacagtttcg ccggcgtcat tcttgccgag ttggacgatg tcgctgtcgc
     8101 gggcgcgccc gatctggcgg ctgtagaatt gccgcaccgg gtcgctccac aggatatgcc
     8161 aggcgtcgat acccgggtcg taggcccgca gcgtcgtgcc atagaagact ccgggcaaaa
     8221 tccagacgtc ctggatggcc cggccctcga gcacccagcc gaaatggatt tcgccaggtc
     8281 ctctgtgctg gctgccgtcg tcgcggtgga cgacggcatc catcgtccat tgcccgatca
     8341 gcccgccata gggcgtcatc ttgtcggcgc ggtcggatgc gggcccgccg ctttgcagtg
     8401 cgccgatgaa cgagttcgtc atttttccat atcttccgtt ccagacagtt gccgtttcgt
     8461 agcccgcgac cgctcgccgc ggcttgggaa aaattgctaa tcttcgccta tgggattgac
     8521 cgcgaatgtt ctggcatcgg gctctggctg gcgcgtccag gacgtggtct gcaccttcgg
     8581 cccgcacgat cgccctttcg ccgagcggca tcacggcgtg tgtgtcgcgg cggtaacgga
     8641 agggaccttc caataccgct cgacgctggg ctcggccgtg ctggcgccgg gggcgttgct
     8701 cctcggtaac gatcaccacg cgttcgaatg ccgccatgag cacggcaccg gcgaccgctg
     8761 tctctcgttc cgtctcacgc ccgaatttct cgaaggcgtc gtagccgcaa tccccggcgt
     8821 gcgacgagcc gtcttctccg cgccgctgct gccgccgcag tctggattgc tgcccatcat
     8881 cgccgcggcc gaagccgcgc gcgaggacgc tgacacggcg gcattcgagg aagtggcgct
     8941 gcgtctcgcc ggcgcggtcg cagcggtgct ggcaggaacg aagggacggc cgccggcgcc
     9001 gagccgccgt cacgagcggc agattaccgc cgcgctgcgc cggatcgaag cgcaggccgg
     9061 cgagccgctg tcgctcgccg atctggccca cgaggcggcg atgagcccgt accacctcct
     9121 gcgcagcttt cgcgccttgg tgggcatgac cccggaccag ttcatcctgc acacgcggct
     9181 caatcgtgcc gcggtgcgtc tgcggcggac ggccgacagc atttcggcga tcgcgtttgc
     9241 agcgggcttc aacgatctgt cgacgttcaa tcgtcgcttt cagcgcatca tggggctcag
     9301 tccgagcgcc tatcgcgctt catcgccccg gtaaccggca aacagcgtgg aactcgccag
     9361 actcaacgcc aatttgtgga ctgcatcctc cgttgaatcg gaacgcgaga aagtggcacg
     9421 ctgatctgag gtcatcctga gcgctgtacg catagcgaac atgcgatcct aacaaacaag
     9481 tcaggcaacg gtggagatcg cgaactcgcg cactcgcttt tggttgtcgg cgttttggtc
     9541 ggctgttagt ctttgcgcac ggcgtcgcgg gggcgccgac aaagcgttcg ggggaaggat
     9601 catggacaat ctgaagggct atttggctcc gttgggccgc ttgttgatgt cgagtctctt
     9661 catttgggcc ggctatcaca agctgatcaa tccgggcggg acggcgcagt atttcgccaa
     9721 tgcgcacgtg ccaatacccg acgtatccgt ttggattggt gtgatcatcg agctgatcgg
     9781 cggcttgctg atcctggttg gcttccaaac cagatgggtt gcgcttgtgc ttgccatctt
     9841 ctgccttgcc accggcttcg gcgtgcacct gcccgcgggg gacctgccca acatgatcaa
     9901 cttctacaag aacctggtga tggcgggcgg cttcctctac gtggcggcct acggcccggg
     9961 cggcatcagc gtcgatcacg ccaccggcat ggaaaaagcc tagcggcgtt gcgcgcgaat
    10021 gggccgcttg cgcgctggat ggcgagcgca caggcgcaat ccttccgagc ggttaacctc
    10081 ctatgggcac tgccgttcga cgatccgtaa gattcagggc ggtacgacgc aggtgcgggc
    10141 gctcgatcgg ggcgcccgga cctgcgacag gctgggccat ggcggatgac cgcagagcgg
    10201 tgaagcgtac ccgcgtgttg cgctgcgcca agatcattgt gccgcgccgc tcgccggtca
    10261 ttcactgtac ggtccagaac atcaccggcg gaggcgcctg cctcaagctc gcgaatacct
    10321 acggcgtgcc gcagacgttc gatctgacct tcgagcacgg ccgcacgcgc cgcgcgtgcc
    10381 gtgtggtctg gcgcaccgac acgaagctcg gcgtcacttt cgagccgcaa gccccgcccg
    10441 cgaaaggctc gaccgggagg tgatctcatc ccgagccggc tttttcatcc tctccggatg
    10501 atgctctaaa actctgtcac ggcggcgatc agccgctcga tgtcctcggg ccgtgatagg
    10561 cgatggtcac cgtccttgac gagggtgagc accacgtcgt cgctggcgag ccgcgagacg
    10621 agttcgaccg cgtgccgcca cggcacgtcg gggtcttcga caccctgaag aatgcgcacg
    10681 gggcagccgg tctcgatcat gttgccgaga atgaggtgtt tgcgtccctc ctcgatcaat
    10741 tgccgggtga cgagataggg ctcgggcgcg tacgcggacg gccgcgccca cacgccgttc
    10801 tcttccaact cttgcctgat cgccgggctg aaacgtttcc acatcaattc ctcggtaaaa
    10861 tcgacggccg gcgcgatcag caccatgccg gcgaccgttc cgggcccgtt ttgcccccgc
    10921 gcgcgcaggg tgcggaccat gagcagcgcc agccagcctc ccatcgacga gccgaccaca
    10981 atctgcgggc cgcggcagca ggcgtcgaac accgcgagac tgtcggcgag ccagcgcccg
    11041 atcgtaccgt cggtgaatgc gccgccggat tcgccgtggc cggaataatc gaagcggacg
    11101 caggcgcggc cggcttgctt cgcccaatgc gccagcgctg cggccttggt gcccttcatg
    11161 tctgacttgt agcccgagag ccagaacagt ccgggcaggg cgccttcccg tgcgcgtatc
    11221 gccagcgcgc gccgctcggc tcccgttcca atttccagga atttcaggct gttatcatcc
    11281 atctgacgct tctcggcggg agccagggag ccggagtgaa ccgcttgc
//
LOCUS       DATMQB010000045         2363 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3424364, whole genome shotgun sequence.
ACCESSION   DATMQB010000045 DATMQB010000000
VERSION     DATMQB010000045.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2363)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2363)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2363
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3424364"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..176)
                     /locus_tag="VNY79_01615"
     CDS             complement(<1..176)
                     /locus_tag="VNY79_01615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020086198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HWX71175.1"
                     /translation="MTAPALDFWFDFASTYSYPAAMRLRTLASAAGVEVKFRPFLLGP
                     IFKAQGWTTSPFNL"
     gene            285..608
                     /locus_tag="VNY79_01620"
     CDS             285..608
                     /locus_tag="VNY79_01620"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004636 - phosphoribosyl-ATP diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HWX71176.1"
                     /translation="MAAFTLHDLEKRVQERAKASAEVSYTRKLIDRGVSHCAKKLGEE
                     AVEAALAAVGEDRDHMIAEAADVLYHLLVLLHARGISLAEVEAELDRRTRQSGLDEKA
                     ARKGG"
     gene            619..1572
                     /gene="coaA"
                     /locus_tag="VNY79_01625"
     CDS             619..1572
                     /gene="coaA"
                     /locus_tag="VNY79_01625"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004594 - pantothenate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HWX71177.1"
                     /translation="MEQRTQPDVLPYRVFSRAEWATLRADTPMTLEPEEIARLRSLHD
                     RLDMSVVAEIYLPLSRLLSLYVAATQRLFRAQQGFLGTEDAKVPYIIGVGGSVAVGKS
                     TTARVLQALLARWPNVPKVDLITTDGFLYPNAVLAREGLMEKKGFPESYDLPALLRFL
                     SEIKAGRHPVRAPVYSHLIYDVIPNQQIEIDRPEILIVEGLNVLQAGRLPKDGKAVPF
                     VSDFFDFSVYLDADESVLLSWYVDRFLALRGTAFADPKSYFHRYAQLSDAEAIATATS
                     IWNRINLVNLRENILPTRPRADLILKKGESHEVEEVALRRL"
     gene            complement(1628..1804)
                     /locus_tag="VNY79_01630"
     CDS             complement(1628..1804)
                     /locus_tag="VNY79_01630"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HWX71178.1"
                     /translation="MEAEQEAPRTPILALTANASAEDRDACLTAGMDGFLVKPLDRER
                     LSAALAGGAAALAA"
     gene            complement(1759..>2363)
                     /locus_tag="VNY79_01635"
     CDS             complement(1759..>2363)
                     /locus_tag="VNY79_01635"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HWX71179.1"
                     /translation="WGARTAIVPDEEVASALLPERPWSAVLVDHAPGTPQSEVLARLA
                     ATVPRRIVLVTPAMRPELAALKEAGFTSYLIRPVRATSLAARFAADDAFEPAAPEPKE
                     AASSGAGTDGSLSILVAEDNEINALLARALLTKLGHRPTMAADGVAAVESFLAARAAG
                     TPYDRVLMDLHVPGMDGIEATGRIEPSRPSRRRRARRSSR"
BASE COUNT          380 a          789 c          817 g          377 t
ORIGIN      
        1 aagaggttga agggcgaggt ggtccagcct tgcgccttga agatcggccc cagcaggaac
       61 ggccggaact tgacctcgac gccggccgcg ctcgcgagcg tccgcaagcg catcgccgcc
      121 ggataggaat aggtcgaggc gaagtcgaac cagaaatcga gggcaggcgc ggtcatggcg
      181 ccattctaac ggcgcgagcg aaggtgcgcg aagccttgat ccaacagacg accgtgccgc
      241 ccgcctctcc cctgggggtt cgagaggtgc taaggaggcg cgccatggct gcgttcaccc
      301 ttcacgacct ggaaaagcgc gtacaggagc gcgccaaggc cagtgcggag gtgtcctaca
      361 cccgcaagct catcgaccgc ggggtgagcc attgcgccaa gaagctcggc gaggaggccg
      421 tggaggcagc gctcgccgcg gtcggcgagg atcgggatca catgatcgcg gaggcggcgg
      481 acgtgcttta ccacctgctc gtgctgctgc acgcccgtgg catttcgctt gccgaggtcg
      541 aggctgagct cgaccggcgc acgcgccagt cgggcctcga cgagaaggcg gcacgcaagg
      601 gcggctgagg ggcagggaat ggagcaacgc acgcagccgg atgttttgcc ctatcgcgtg
      661 ttctcccgcg ccgagtgggc gacgctgcgc gcggatacgc cgatgacgct cgagccggag
      721 gagatcgcgc ggctgcgttc gctgcatgac cgcctcgaca tgtccgtggt cgcggaaatc
      781 tatctgccgc tgtcccggct cctttcgctc tacgtcgccg cgacccagcg gctgtttcgc
      841 gcccagcaag gcttcctcgg caccgaggac gccaaggtgc cttacatcat cggcgtcggc
      901 ggctcggtcg cggtcggcaa gtcgaccacg gcgcgtgtgc tgcaggcatt gctggcgcgt
      961 tggccgaacg tgcccaaggt cgatctcatc accacagacg gctttcttta tcccaacgcg
     1021 gtgcttgccc gcgaaggcct gatggagaaa aagggctttc cggagagcta cgatctgccg
     1081 gcgctgttgc ggttcctgtc cgaaatcaaa gccggccggc acccggtacg tgcgccggtc
     1141 tactcgcacc tgatctacga cgtcattccg aaccagcaga tcgagatcga ccggcccgag
     1201 atcctcattg tcgagggtct caacgtgctg caggccgggc gcctgcccaa ggacggcaag
     1261 gccgtgccct tcgtctccga cttcttcgat ttctcggtgt atctcgatgc cgatgaaagc
     1321 gtgctgctgt cgtggtacgt cgaccgcttt ctcgccctgc gcggcaccgc cttcgccgac
     1381 ccgaagtcgt actttcaccg ctacgcgcaa ttgtccgacg cggaggcgat cgccaccgcg
     1441 acttcgatct ggaaccgcat caacctggtc aacctgcgcg aaaatatcct gccgacccgg
     1501 ccccgcgccg atctgatcct caagaagggc gaaagccatg aggtcgagga ggtcgcgctg
     1561 cgccggctgt gaggcagcgc ccgcgttgag gggtccgcga cagcgtccga gcgaaaacga
     1621 aagatcctta cgccgccagc gcggcggcgc cgccggcgag cgcggcgctg agacgctcgc
     1681 ggtcgagcgg tttgaccagg aagccgtcca tgcccgcggt caagcaggca tcgcgatcct
     1741 cggcggaggc gttcgcggtc agcgcgagga tcggcgtgcg cggcgcctcc tgctcggcct
     1801 cgatggctct atgcggcccg tggcctcgat gccgtccatg cccggcacgt gcaggtccat
     1861 gagcacgcga tcgtagggcg tgccggccgc acgggcggca aggaatgatt cgacggccgc
     1921 cacgccgtcg gcggccatcg tcggacggtg gccgagcttg gtgaggaggg cgcgcgcgag
     1981 cagcgcgttg atctcgttgt cctcggcgac aaggatcgac aggctgccgt ccgtgcccgc
     2041 gccgcttgac gccgcctcct tgggttcggg cgccgccggc tcgaaggcgt cgtccgcggc
     2101 aaagcgcgcg gcgagcgagg tggcgcgcac cggcctgatc aggtagctgg tgaagcccgc
     2161 ttccttcagc gccgcaagct cggggcgcat cgccggcgtg accagcacga tccgccgcgg
     2221 gaccgttgcg gcgagtcgcg ccagcacttc gctttgtggc gtgcccggcg cgtggtcgac
     2281 cagcacagcg ctccacggcc gctccggcag gagggcggaa gcgacctctt cgtcgggcac
     2341 gatggccgtt cgcgcgcccc agc
//
LOCUS       DATMQB010000046         5091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_630890, whole genome shotgun sequence.
ACCESSION   DATMQB010000046 DATMQB010000000
VERSION     DATMQB010000046.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5091
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_630890"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..466)
                     /locus_tag="VNY79_01640"
     CDS             complement(<1..466)
                     /locus_tag="VNY79_01640"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HWX71180.1"
                     /translation="MDRLVASKAAADDFTRTRWWWIRHAPVRVDEGRIYGQRDLPCDC
                     SDAPVFSGLAALLPQDAIWVTSHLVRTVQTAKAIQAAGNFAAPEIHQDKDLAEQHLGD
                     WQGLDRRNFLLGRQQEPDSFWYAAADERAPNGESFVDVIERVRAAVARVNRTY"
     gene            794..2182
                     /locus_tag="VNY79_01645"
     CDS             794..2182
                     /locus_tag="VNY79_01645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase"
                     /protein_id="HWX71181.1"
                     /translation="MPPLSNLATRDVETLVHPYINLASFRESGPLVIERGQGVFVYDT
                     DGKPYIEGMAGLWCTALGYGNEELVEAAATQMRKLSFAHLFTGKSHDPAIELAEKLKE
                     MAPVPISKIFFCNSGSEANDTQVKLVWYFNNARGRPQKKKIISRVKAYHGVTIAAASL
                     TGLPGNHRDFDLPLPGFLHAGCPHHYRFAQEEESEEDFATRLAVELDALIVNEGPDTV
                     AAFIAEPVMGAGGVIVPPETYFEKIMPVCAKHDLFVISDEVICGFGRLGTAFGCEKLG
                     FKPHAISLAKALSSAYLPIAAVMIPEIMYEALLAESKKIGVFGHGFTYGGHPVSAAVA
                     VKTLEIYAREQIFDKVAKHAPLFQSRLQALGEHPLVGEARGLGLIGGVELVADKASKR
                     SFEAKHGVGARTVHFAEQEGLLVRSVIGDVLTLSPPLVISVVEIDELFNRLGRALDKT
                     LDWVTRERLAEG"
     gene            2251..3177
                     /locus_tag="VNY79_01650"
     CDS             2251..3177
                     /locus_tag="VNY79_01650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018041982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HWX71182.1"
                     /translation="MTADTSARNGSGASVARKIRVTRRRVVAGAAALAGLSVAATAAY
                     AAAIEPQGLIVTRYVPSLPSWPAGRKLSVTVIADLHSGGPNMLVPHVQHVIDTANGLN
                     SDLVVLLGDYIARYRFKTERLPDGRLSAELARLKAPLGVWAILGNHDWWYEISTVRRA
                     LADARIPVLENNAVKLGTEGRQFWLAGIGDQLAHLLGHGRFRGEDDLPGTLAQVRTGD
                     PVLLLVHEPDIFPRVPDRVALTLAGHTHGGQIRLPFIWPAFVPSKLGKRFAYGHIVED
                     GRHMIVSGGLGTSVVPARLGVPPEVVRIELGA"
     gene            complement(3414..4031)
                     /locus_tag="VNY79_01655"
     CDS             complement(3414..4031)
                     /locus_tag="VNY79_01655"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013912946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HWX71183.1"
                     /translation="MQEVMEPASEASWKPRDRLLMSNLPYNQAAIADAYRRHIVEYHR
                     KEAPGSVVVDSDNKFLYFVLPQGKAIRYGIAVGEDAQAWTGLAKIGRMEEWPGWVPTP
                     SEQRRLGPLPSYVTGGPHNPLGARGMYLYSANKDTLYRIHGTNQPEYIGSAVSSGCIR
                     MTNEDSIDLYARVKVGTPVVVLGPGHGDSPWSARMAATSAQPARN"
     gene            4445..4633
                     /locus_tag="VNY79_01660"
     CDS             4445..4633
                     /locus_tag="VNY79_01660"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71184.1"
                     /translation="MQDVTAGIADENRQQERAVRKSSNGNIALQHCYGQIGISAVAAA
                     VRYQGDSKNPAYAPAAVD"
     gene            complement(4692..>5091)
                     /locus_tag="VNY79_01665"
     CDS             complement(4692..>5091)
                     /locus_tag="VNY79_01665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SPW repeat protein"
                     /protein_id="HWX71185.1"
                     /translation="VRYGRVSVDDWSSARLCDVGNLLLGMILFFSPWLFGLSAGAQWQ
                     TASTVGIFIAVLSVAALAAFAIWEEWLNLIVGLWLIASPWLLGFQDSSAMAVDVSIGA
                     VVAILAALEVWLTHDTQPRLTATRETAPPL"
BASE COUNT          881 a         1686 c         1618 g          906 t
ORIGIN      
        1 ggtaggtgcg gttcacccgc gcgacggcgg cacggacccg ctcgatgacg tcgacgaagc
       61 tttcgccgtt cggcgcccgc tcgtccgcgg ccgcgtacca gaaggagtcc ggctcctgct
      121 gccggcccag gagaaagttg cggcggtcta gtccctgcca atcgccgaga tgttgctcgg
      181 caaggtcctt gtcctggtga atttccgggg ccgcgaaatt tcccgctgcc tggatcgcct
      241 tcgccgtctg caccgtgcgc accagatgac tcgtcaccca gatcgcgtct tgcggcagca
      301 gcgccgcgag acccgaaaac accggtgcgt cgctgcagtc gcacggcaaa tcgcgttgcc
      361 cgtagatccg gccctcgtcg acgcgcactg gggcatggcg tatccaccac caacgcgtgc
      421 gggtgaagtc gtcggccgcg gctttgctgg cgacgaggcg gtccattgtc gatgcttcgg
      481 acaagcttgc tccccgcttc ggtcaccgct acgcgtagct gttgctgacg tctgcctggc
      541 cgcttaagac gacaaaaggc gccgtgcggc tcgccgcaat cccggccctg gcttacggat
      601 tgtggcggtt gcgttcaagc gcaaatgcga aaggaacgct ggcggcggcg gcgcgccgct
      661 gcggctttgc gcggtgatgg atgcagccct gggccggcac ggataatgtg ctaaaggccg
      721 gctttgccgg caggcatcat tcggtcacac tagcagttgc acaccaagtc aaggcgacgg
      781 ccaaaggatt ttcatgcccc cgctcagcaa tctcgccacc cgcgacgtcg aaacgctggt
      841 gcacccctac atcaatctgg ccagcttccg cgagagcggg ccgctcgtca tcgagcgcgg
      901 gcagggcgtc ttcgtctacg ataccgacgg caagccctac atcgaaggca tggccgggct
      961 gtggtgcacc gcgctcggct acggcaacga ggagctggtc gaggccgccg cgacgcagat
     1021 gcgcaagctt tcctttgcgc atctttttac cgggaagagc cacgacccgg ccatcgagct
     1081 tgccgagaag ctcaaggaaa tggcgccggt gccgatctcg aaaatcttct tctgcaattc
     1141 cggatcggag gcgaacgaca cccaggtcaa gctcgtctgg tacttcaaca atgcgcgcgg
     1201 ccggccgcag aagaagaaga tcatcagccg cgtgaaagcc tatcacgggg tcacgatcgc
     1261 cgcggcctcg ctgaccgggc tccccggcaa tcaccgcgac ttcgatctgc cgctgccagg
     1321 atttctgcat gccgggtgcc cgcatcacta tcgctttgcg caggaggaag agagcgagga
     1381 ggatttcgcc actcgccttg ccgtcgagct cgatgcgctg atcgtcaacg aaggcccgga
     1441 cacggtggcg gcgttcattg ccgagccggt gatgggggcg ggcggcgtca tcgtgccgcc
     1501 ggagacctat ttcgagaaga tcatgccggt ctgcgccaag cacgatctct tcgtcatcag
     1561 cgacgaggtg atttgcgggt tcgggcggtt gggcaccgcc ttcggctgcg agaagctcgg
     1621 cttcaagccg cacgcgatct cgctcgccaa ggcgctgtcg tcggcctatc tgccgatcgc
     1681 cgcggtgatg atcccggaaa tcatgtacga ggcgcttctc gctgaaagca aaaagatcgg
     1741 cgttttcggc cacggcttca cctatggcgg tcacccggtt tccgccgcgg tcgcggtcaa
     1801 gacgctggaa atctacgcgc gcgagcagat ctttgacaaa gtcgccaaac acgccccgct
     1861 gttccaatcc cggctccagg cgctcggtga gcatccgctc gtcggcgagg cgcgcggcct
     1921 cggcctgatc ggcggcgtgg aactcgtcgc cgacaaggcc agcaagcgtt cgttcgaggc
     1981 caagcatggc gtcggcgccc gcaccgtgca tttcgccgag caggaaggcc tgcttgttcg
     2041 ctcggtgatc ggcgacgtgc tgacgctgtc gccgccgctt gtcatcagcg ttgtcgaaat
     2101 cgacgagctc ttcaaccggc tcgggcgggc gctggacaag acgctcgatt gggtcacgcg
     2161 cgagcgcttg gcggaaggct gatacgaatg acgacgatgt gatggtgaca ctgaagattc
     2221 cgttcaccac tcgcgcgcta tgagcccgcc atgacggcgg acacatcggc taggaacggg
     2281 agcggcgcgt cggtcgcgcg caaaatacgc gtgacgcggc gccgggttgt cgccggtgca
     2341 gccgcgctgg ccggcctgtc cgtggcggcg acggcggctt acgccgccgc catcgagccg
     2401 cagggcctca tcgtcacccg gtacgtgccg tcgctgccgt cctggcccgc gggccgcaag
     2461 ctttcagtca ccgtgatcgc cgacctccat tccggcgggc cgaacatgtt ggtgccgcac
     2521 gtgcagcacg tgatcgacac cgccaatgga ctgaattccg acctcgtcgt cctgctcggc
     2581 gactacatcg cgcggtaccg gttcaagacc gagcgcctgc ccgacggacg attgtcggcc
     2641 gagcttgcgc ggcttaaggc tccgctcggc gtctgggcga tcctcggcaa tcatgactgg
     2701 tggtacgaaa tctccaccgt gcgccgcgcg ctcgccgatg cccgcatccc cgttctggaa
     2761 aacaacgcgg tcaagctcgg aacggagggc cggcagttct ggctcgccgg cattggcgat
     2821 cagctcgcgc atctcctcgg gcacggccgc ttccgcggtg aagacgacct gccgggcacg
     2881 ctggcgcagg tccgcacggg cgatcccgtc ctcctgctcg ttcacgagcc ggatattttt
     2941 ccgcgcgtgc ccgaccgcgt cgcgctgacg ctcgccggcc atactcacgg cgggcagatc
     3001 cgcctgccgt tcatctggcc ggcgttcgtt ccctcgaagt taggcaagcg gttcgcctac
     3061 ggtcacatcg tcgaggacgg ccggcacatg atcgtgtcgg gcgggctcgg caccagcgtc
     3121 gtcccggcgc ggctcggcgt tcctcccgag gtcgtgcgga tcgaactcgg cgcttgagcg
     3181 cgccgctccc ctcacacccg acgatgcgcg gcaaggcgcg ggccgaggcg gaatgagttg
     3241 ggttcgaaag ccatcttcgt catggcccgg cttgttcgcg ccatccacgc ctttgctttg
     3301 gcgtggcagc taagacgtgg gtgcgcgcaa cgcgcgcggg catcacgatt caatcaaatc
     3361 tgatgccggt ctaggccgcg cctcgatgtt ggcctgcgca ggaaacgcgt ggatcagttg
     3421 cgggctggct gggcagacgt cgctgccatc cgcgcgctcc acggcgaatc gccgtgcccc
     3481 ggccccagca cgaccactgg cgtgccgacc ttcacccgcg cgtacaggtc gatcgagtcc
     3541 tcgttggtca tgcggataca gccggacgaa acggcactgc cgatgtattc gggctgattg
     3601 gtgccgtgga tgcgatagag cgtatccttg ttggccgagt aaaggtacat gccgcgcgcg
     3661 ccgagcggat tgtgcggccc gccggtgaca taggatggca acggcccaag gcggcgttgc
     3721 tcgctgggcg tgggcaccca tccgggccat tcttccatgc ggccgatctt ggcgagcccg
     3781 gtccacgcct gcgcatcctc gccgacggct atgccgtagc gaatggcttt gccctgcggc
     3841 agcacgaagt agagaaactt gttgtctgaa tcgacgacaa cgctgcccgg cgcttccttg
     3901 cggtgatact cgacaatgtg ccgacgatag gcgtccgcaa tcgccgcctg attgtacggc
     3961 aagttggaca tcaaaagccg gtcgcgcggc ttccagctgg cttcgctcgc cggctccatc
     4021 acctcttgca tgcagccgcc aagcgtgacg gccgctatca agaatgctag cgcacgcatc
     4081 gccataactt gcccactctt cgccagtcct ggcctcgatt ctaccagcga ttccacaaaa
     4141 tcacataccc aaatgctcgc gtcgatgcca gccgtcagcg ccctccgatc gcatcgtcgc
     4201 cgccaagtgt tgcaggaatg tcgcaccttc cggttgacaa gtgggatacc cggtccgttg
     4261 gccgaccgcg gccactatgc ccgccaccga ttaaacgacg gtttaccact ttcggtatca
     4321 ttgctctttg gcgacgattt gagcggaaaa tgtcatgggc gcggtcgatt tcccgcccac
     4381 ttccgccgca ctcgacgcct agggcttgca agatcgctca cgcggatggg aatggggtgc
     4441 aagtatgcag gacgttactg ccggaatagc cgacgagaac cgccagcagg agcgcgcggt
     4501 tcgcaaatcc tcgaacggga atatcgcgct ccagcactgc tacggccaaa tcgggatttc
     4561 cgccgttgcg gccgccgtcc gctatcaggg ggatagcaag aacccggcct atgccccggc
     4621 cgcggtggat taggacaatc tcgggcgcgc agacctgacc gcagggcttc gcttcgtcgc
     4681 cgggacggcg cctacaaggg cggagccgtc tcgcgggttg cggtgaggcg cggctgcgta
     4741 tcgtgcgtca gccacacttc gagcgcggcc aatatcgcca ccacggcgcc gatcgacacg
     4801 tcgacggcca tcgcgctgct gtcctggaat cccaagagcc agggcgaggc gatgagccat
     4861 agcccgacga tcaggttcag ccactcctcc cagatcgcga atgcggcaag cgccgcaacc
     4921 gacagcacgg cgataaagat gccgactgtc gaggcggtct gccattgcgc gcctgcggac
     4981 aggccgaaca gccagggcga gaagaacagg atcatgccca ggagcaagtt cccaacatcg
     5041 cagagtcttg cgctcgacca atcgtccacg gaaaccctcc catagcggac c
//
LOCUS       DATMQB010000047         3377 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1872520, whole genome shotgun sequence.
ACCESSION   DATMQB010000047 DATMQB010000000
VERSION     DATMQB010000047.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3377)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3377)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3377
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1872520"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            423..>3377
                     /locus_tag="VNY79_01670"
     CDS             423..>3377
                     /locus_tag="VNY79_01670"
                     /inference="COORDINATES: protein motif:HMM:NF022932.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospholipase D-like domain-containing protein"
                     /protein_id="HWX71186.1"
                     /translation="MPTFADAGRAIEQNLEALRKPGILAVRPGYRIEGGWPVGDPVVV
                     ALVGAKKGEAAAYGLPSQIGGVPVEVREASPLERLKATQPSVHAALKERTRVEQHTPD
                     FPFEHLFAAPPGAVTAAARRPAKPQIPYRPAAPALNPVTDTLTVICNASPDAGWPTLR
                     DLFARTQQKLVVGMYDFTSAHVLAGLENALSGGGGARNLSLVLDHPTRNPTADQSDEE
                     TEQDLNNKLRAALSFAWAPVRSSPEVSEWIFPSAYHIKVAVRDGVELWLSSGNWNNSN
                     QPEDAPVTDPDPAHAAETFKNSDRDWHVVITHQQLAQLYESYLLNDRESALPAQGRVT
                     EAVELEAFAEQTFDLADVNPAAVARPPRKFFAPATVTEPMTVQPLLTPDAAPDGGGIY
                     AEKMLELISSAQHSLYIQLQYIHPSNQAEEAAFTALLNAVAARGDAGVDVRIILSQWQ
                     NSQWMERLQAAGIDARFVRIQQGVHNKGFLVDHQRVVISSQNWSGAGVLQNRDAGLII
                     DNATIARYFEGIFLHDWDNVAVGHGGRVGVTARDAAVAQIFGWEDDPGDRESSLVPPE
                     LRPVPDLTLAPLQLAISGISAPPPRAYAPGTAEFRYWSAAEAAARGAAFWRHLLPAGT
                     TWQPGETLDLLLDEGEDFNAFYDRRALNFFHGTAGGRTVFSGESPDIVCHEQGHAVLD
                     ALRPELFDAGTIEAAAFHESFGDMSALLAALQLPSMRAAVIADTQGDLSRNSRLSRLA
                     EQLGWAIRQTRPSAVDPDCLRNAANSFFYTNPEALPSRAPATSLSSEPHSFSRVFTGA
                     FLEALAGGFRLVSANPGEADLQAVSQDFGRLLVAGILAAPIVPEYMSQVAAAIIASDA
                     GAEDAAQGKYSEVLKSAFVRHGILSPQSAVGIATFRATGVAAAARTLGMAAGVGQELP
                     YVALSAAEYGLGDRPLLVRAPSQPRRFAVSAAAFGVGSVTPSNSEHAARAFVEDLLQR
                     GQIDIGGAGHPEV"
BASE COUNT          605 a         1120 c         1079 g          573 t
ORIGIN      
        1 ggcaccacgc cgccccctga tcggaaagca accataccgt cctccctctc gggaccggcc
       61 ttgcggccgg gctgccaaaa aggacgcgtt acgtcgttgc ataaccacca tgggccatag
      121 gcacgtgcga gtgcgtcgag agccggatag atacgcttat ctgccggcaa agcaagggta
      181 gatttcgaaa aatgaagctt tcatgacgta gcgctcgcgc atcatcggtg tcagcccata
      241 aggctcggag cagcgttaac cgaacacgtc attatcgtgt aacgtcgtgc gggtagaaca
      301 gagcaatcat gggcaccagg cgggtcagtt aagggcgaac ccaaacctgc gcaaatgtgc
      361 gcacatcgga tgcgctgagc ccgggtgcgc tgcaaaatgt taggcttgct agggaggatc
      421 ccatgccgac gttcgcggat gcgggaagag cgatcgagca gaacctagag gcgctcagaa
      481 aacccggcat attagcggtg cgcccaggtt accgcatcga agggggctgg ccggtcgggg
      541 atccggtggt cgtcgcgctg gtcggtgcca agaagggcga ggcggcggcc tacgggctgc
      601 cctctcagat cggcggcgtc cccgtcgagg tgcgcgaagc ctccccgctg gagcgcttga
      661 aggccaccca accgagcgtc catgccgcgc tgaaggagcg cacccgggtc gagcagcata
      721 cgcccgattt tccgttcgaa catttgtttg ccgcgccgcc gggggcggtc acggcggcgg
      781 cgcggcggcc ggcaaaaccg caaattccct atcgcccggc ggcgccggcg ctcaatccgg
      841 taacggatac gctgaccgtc atctgcaatg ccagccccga tgctggatgg ccgacgctta
      901 gagacctttt cgcgcggaca cagcaaaagc tggtcgtcgg gatgtacgac ttcacctcgg
      961 cgcacgtcct ggccggcctc gagaacgcgc tttcaggcgg tggtggcgcg cgcaatctgt
     1021 cgctcgtgct cgaccatcca acgcgcaatc caacggccga ccagagtgac gaggagacgg
     1081 agcaggacct caacaacaag ctcagggccg cgctttcctt tgcctgggca ccggtgcgct
     1141 cgagccctga ggtgagcgag tggatcttcc cgtcggccta ccacatcaag gtcgccgtgc
     1201 gcgacggcgt ggagctctgg ctgtcgagcg gcaattggaa caattcgaac cagccggaag
     1261 acgctcccgt caccgatccg gacccggcgc acgctgccga gacctttaag aacagcgacc
     1321 gcgactggca cgtcgtcatc acccatcaac agctcgcgca gctctacgaa tcttacctcc
     1381 tcaatgaccg tgaatcggca ctcccggctc agggtcgggt gacggaggcg gtcgaactgg
     1441 aggcgttcgc cgaacagaca ttcgaccttg cggacgttaa tccggcggcg gtggcgcgcc
     1501 cgccccgcaa attcttcgcg cccgccaccg tcacggagcc gatgaccgtc cagccgctct
     1561 tgacgccgga tgccgcgccc gacggcggcg gcatttacgc cgaaaagatg ctggagctga
     1621 tctcgagcgc gcaacacagc ctttatatcc aactgcaata cattcacccg tccaaccagg
     1681 ccgaggaagc agccttcact gcgctgctca acgccgtggc ggcgcgcggc gacgccggcg
     1741 tcgatgtccg catcatcctc agccaatggc agaacagcca atggatggaa cggcttcagg
     1801 cggccgggat cgacgctagg ttcgtccgta tccagcaggg cgtccacaac aagggcttcc
     1861 tcgtcgacca tcaacgggtc gtcatcagca gccagaattg gtcgggtgcg ggcgtgctgc
     1921 aaaatcgcga tgccgggctc attatcgaca acgcgacaat cgctcgatac ttcgaaggga
     1981 tctttctgca cgactgggac aatgtcgcgg tcggccatgg cggtcgagtg ggcgtgacgg
     2041 ctcgcgacgc agcggtcgcg cagatctttg gctgggagga cgatccgggt gaccgagagt
     2101 cgtcactcgt cccgccagag ctgcggccgg tccccgacct gacactggca ccactgcagc
     2161 ttgccatctc cggcattagc gcgccaccgc cgcgcgccta tgcgccgggt actgcggaat
     2221 ttcgttattg gtcggcggcc gaggcggcgg cgcgcggagc ggccttttgg cgtcacctgc
     2281 tcccggccgg cacgacttgg caaccgggtg agacgcttga ccttctgctc gacgagggcg
     2341 aagacttcaa cgctttttac gaccgccgcg cgctcaactt ctttcacggt acggcgggcg
     2401 ggcgaacagt cttttcgggc gagagtccgg acatcgtctg ccacgagcag ggacatgccg
     2461 tcctcgacgc gctgcgcccg gagcttttcg acgccggaac gatcgaagcg gctgccttcc
     2521 acgaatcctt cggcgatatg agcgcgctcc tcgccgcgct gcagctcccc tcgatgcgag
     2581 ccgcggtgat cgccgataca cagggcgatc tttcgcgaaa ttcgcggctg tcgcgcctcg
     2641 ccgagcagct cggctgggca atccgtcaga cccggccgag cgcggtcgat cctgattgcc
     2701 tgcgcaatgc cgccaactcg ttcttctaca ccaacccgga agctttgccg tcgcgggcgc
     2761 cggcgacgag cctctcctcg gagccgcact ccttctcccg ggtcttcacc ggcgcctttc
     2821 tcgaagcgct ggcaggcggc tttcggctcg tctctgcgaa ccccggcgag gccgatctgc
     2881 aggcggtaag tcaagatttc gggcggttgc tggtcgcggg catcctcgca gcgcctatcg
     2941 tgccggaata tatgagccaa gtcgctgccg cgatcattgc atccgatgcc ggcgccgaag
     3001 acgcagcgca aggaaagtac agcgaggtcc tcaagagcgc gttcgtgcga cacggcatcc
     3061 tgtcgccgca atcggcggtc ggcatcgcca ctttccgcgc caccggcgtc gccgccgcgg
     3121 cccgcacgct cggcatggcc gcgggggttg ggcaagagct gccatacgtc gcgctctcgg
     3181 ccgcggagta tgggctcggc gaccggccgc tgcttgtgcg tgcgccatcc caaccgcgcc
     3241 gctttgccgt ctcggccgcc gcgttcgggg tgggctcagt cacgccctcg aacagcgagc
     3301 acgcggcacg cgcttttgtc gaggaccttc tgcaacgcgg ccaaatcgat atcggcggag
     3361 cggggcaccc ggaggtc
//
LOCUS       DATMQB010000048        10336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1252519, whole genome shotgun sequence.
ACCESSION   DATMQB010000048 DATMQB010000000
VERSION     DATMQB010000048.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10336
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1252519"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1226)
                     /locus_tag="VNY79_01675"
     CDS             complement(<1..1226)
                     /locus_tag="VNY79_01675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HWX71187.1"
                     /translation="MAERLIIEKLGHRGDGVAGGADGPIYVPGALPGETVEVDSVAGH
                     PDRRRLLHVDTPSAERVPPVCPHFGVCGGCAVQHWDLARYRAWKRDLVVEALRQAGLD
                     APVAELIDAHGEGRRRAVFHARRGTHEVLEVGFSAARAHRLVAIDRCPVLAKSLDGAI
                     DAAWAIAEAIGPIRKPLDIQFTASDAGLDIDVRGSGPLSPGAMTALASLAGKRDVARL
                     TRHGEMIAQLRPPTLRMGKAIVHLPPAAFLQSTAAGEAVLARFVLDACAGAASVADLF
                     AGIGPFTLRLAEVARVCAVDNDDAALAALGRAAAATAGLKPVAIETRDLFRRPLMVAE
                     LAHLDAVIFDPPRQGALAQARELAASGVPLVVAVSCNPATFARDASELLRGGYRLTSV
                     TPIDQFRYAAHVEIVAR"
     gene            complement(1219..1950)
                     /locus_tag="VNY79_01680"
     CDS             complement(1219..1950)
                     /locus_tag="VNY79_01680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HWX71188.1"
                     /translation="MTIRQRADRLLVERGLFESRARAQAAIAAGRVIADGLIVRKASE
                     PLSVAAAIEATPEHPYVSRGGIKLVAALDSFSLEVSGRVCLDVGASTGGFTQVLIARG
                     APRVYAVDVGRDQLHPSLRGRDAIVSIEGADIRTLDPSRLPELPDFATIDVSFISLKL
                     VLPGIGKLLRARASLVALIKPQFEIGRRDIKKGIVRDPAVHHRVCNEIAAFLAVQGWN
                     VGGVVPSPILGGDGNREFFIEAERG"
     gene            complement(2075..4003)
                     /gene="dxs"
                     /locus_tag="VNY79_01685"
     CDS             complement(2075..4003)
                     /gene="dxs"
                     /locus_tag="VNY79_01685"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008661 - 1-deoxy-D-xylulose-5-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009240 - isopentenyl diphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HWX71189.1"
                     /translation="MRVNSRTPLLDRIKTPADLRRLEPSQLRQLADELRQETIDAVAV
                     TGGHLGAGLGVIELTVALHYVFETPTDRLVWDVGHQAYPHKILTGRRDRIRTLRQGGG
                     LSGFTKRAESEYDPFGAAHSSTSISAALGMAVARDLEDKQNNVVAVIGDGAMSAGMAY
                     EAMNNAGAMNSRLIVVLNDNDMSIAPPVGALSAYLARRVSGRSYRVVRNGIRRFAKLL
                     PKVLEKRALAMEEYARGLATGGTLFDELGFFYVGPIDGHNIDHLLPVLKNVRDAKNGP
                     FLVHVVTQKGKGYAPAEKSADKYHGVVKFDVATGTQVKAKAAAPAYQKVYGESLIKEA
                     RKDPKIVAITAAMPSGTGVDLFQKEFPNRTFDVGIAEQHGITFAAGLATEGYKPFATI
                     YSTFLQRAYDQVVHDVAIQRLPVRFAMDRAGLVGADGPTHAGSFDIAYLGCLPGFVLM
                     APADEAELVHMVATAVAIDDRPSALRYPRGEGRGVPLPEEGKPLEIGKGRVLREGTKI
                     ALFSFGARLGECLKAADELAAHGLSTTVADARFAKPLDTELLLRLAREHEVLLTVEEG
                     SIGGFGAFAMQELAEHGVLDRGLKVRAMVLPDFFIDQDSPNAMYAKAGLDAKSIVAKA
                     FEALGQNVRGDVVKLARS"
     gene            4321..7008
                     /gene="ligD"
                     /locus_tag="VNY79_01690"
     CDS             4321..7008
                     /gene="ligD"
                     /locus_tag="VNY79_01690"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: protein motif:HMM:NF004628.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA ligase D"
                     /protein_id="HWX71190.1"
                     /translation="MALETYRKKRQFDMTPEPRGRKAPRGGHRYVIQKHAARRLHYDL
                     RLELDGVMKSWAITRGPSLDPNEKRLAVHVEDHPIEYNAFEGTIPQGEYGGGTVMIWD
                     RGRWLPEGDPHKGYAKGHLVFDLDGEKLHGRWHLVRMRTRDSDRHDNWLLIKGKDEEA
                     RGPRDKDILEERSGSVVSGRSIEEIAAGKGGRKRVWHSNRGAGADEMEDKLQSAPTAK
                     KAAPKAAAKPKRRAKAATKPKRRAKAAALAVARIGGEQAVRERPAGKRAALPDFVPLS
                     LAALYEKPPSGPEWLHEIKFDGYRMEARLDHGGVRLLTRREQDWTHRFKPVAAAVAAL
                     AAESALLDGEVVVEDERGVSSFSLLQTDLKDGRADRFVYYVFDLLSLDGRDFSREPLI
                     ERKAALLRLLQAGDGTGVVRYTDHFNERGALILDKACEMGLEGIISKRRNAPYRSGRS
                     DNFVKSKCRGGQELIVAGYAPATAVPNAIGALIAAMNENGELRYAGRVGTGYTQKMAR
                     DLFKRLQPLRIEQRPIKLPADERRKDVVWVRPELVIEAASAGMTHGGILRQASFKGIR
                     EDKAAAEVVPEEPAAMKNLAKDPAPEPSKNSRPARAGKNKNAEVSNVRLTHPDRVYWA
                     DVGVTKKDLADYYVSVWDWMKPHLVGRALAIVRCPDGTRGECFFQKHIAANVKSSPLR
                     HVVPGKDHDVIAVEAVDDLVALAQSGALEIHVRGSRLDSLETCDRIVFDLDPGEGVAW
                     TEVIAAAREVRERLKAEKLESFVKLSGGKGVHLVAPIADADWDTAKLFTQRIVTGMAI
                     DNPKVYLAKMTKALRKGRIFIDYFRNSREATSVAAYSTRARDGAPVSAPVTWERLSRT
                     NGGNDFSLLDLKKRLKEDAWAEIGKVRQKLPETVSPRRR"
     gene            complement(7031..7432)
                     /locus_tag="VNY79_01695"
     CDS             complement(7031..7432)
                     /locus_tag="VNY79_01695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71191.1"
                     /translation="MFVPTSGNVHPGLHRDIEPVAVVPVSNPDAIREALKATIARGNP
                     PTPHYPRGSRPQPVVLKYADVKTWSAFARGMSSWSIKEKDESYQIVGYRTNRDGHREE
                     DPEQRITFPPRSTLDEVVDRMIAILQDAARK"
     gene            complement(7520..7777)
                     /locus_tag="VNY79_01700"
     CDS             complement(7520..7777)
                     /locus_tag="VNY79_01700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71192.1"
                     /translation="MDAEKKSAWLRKLDEECPYQVVLPRRQLADDSEILNFLIKYVGK
                     FDMYVEDDYAAFVRYCFEDPLDAEIFRSRFEPKAERFKLAG"
     gene            7862..8125
                     /locus_tag="VNY79_01705"
     CDS             7862..8125
                     /locus_tag="VNY79_01705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018098597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71193.1"
                     /translation="MAVETIGDAHSLGWRVIARCTHGREDGPRTQSNHACTYRKELDM
                     ETLVWTRGRAFPLSRLESRLRCPRCGSRDVVVLYQPPSRAVVG"
     gene            complement(8136..8420)
                     /locus_tag="VNY79_01710"
     CDS             complement(8136..8420)
                     /locus_tag="VNY79_01710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71194.1"
                     /translation="MFNPWLTLAFKTMQLGVEAQSVIALRMMRLAAGGARGRAEANRM
                     VAEKVGAFTDAQTAATAAILTGRRPKIVAGKVLNAYKKRVGANRRRLSRR"
     gene            8497..9297
                     /locus_tag="VNY79_01715"
     CDS             8497..9297
                     /locus_tag="VNY79_01715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acyl homoserine lactonase family protein"
                     /protein_id="HWX71195.1"
                     /translation="MSDDIHEVYAIRYGHHARRSPENFIGGDPHDMLQPLDFFVWAIV
                     GPSGAIIVDTGFDEAMGRRRQREIVKPVRDGLLALGVAPESVEAVVVSHMHYDHCGNY
                     DLFPRARYHLQDREMAYATGRCMCHQQTRLPFEVEDVVAMVRKVFSGRAAFHDGADEV
                     VPGVTVHHIGGHSKGLQSVRVKTRRGHVVLAADASHLYAHVDGGRVFPIVYNVAEVVE
                     GYETLKKLATSPGHIVPGHDPLVLTRYPAAKPGLEGWIARLDAEPRDR"
     gene            9380..>10336
                     /locus_tag="VNY79_01720"
     CDS             9380..>10336
                     /locus_tag="VNY79_01720"
                     /inference="COORDINATES: protein motif:HMM:NF037037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71196.1"
                     /translation="MTARPSLPALERLVAAHRLPEALDMALRILAAVDSRAGRIDGVV
                     AGPSYPDGGEEDVALIFATRFAAVFGQLITAGDLKITATDYERLLSYYRWIDLIFSLS
                     GFRTSDHLVRLIAKDAGGGRLSFQGTDYLRLLTVLTMNSFIHVDFDRFWRTNRVASAI
                     AFFNYISSRYVFSRRAFAFRERLLEWIPERLAEVKFGAMTLARLPEVYMHCSYALTAR
                     KHAIKRPLMEQMRRACLEAGVIEAEGAIPPHGAGRATVVVVGERFAAGHAVFRSHSRA
                     VRALRARFHVVGAVHPNPTSALIADYFDECIAFPTGDFFASVR"
BASE COUNT         1825 a         3369 c         3439 g         1703 t
ORIGIN      
        1 cgcgcgacga tctcgacgtg cgccgcgtag cggaactgat cgatcggcgt gaccgaggtc
       61 agccggtagc cgccgcggag aagttcgctc gcgtcgcggg cgaacgtcgc aggattgcat
      121 gataccgcga cgacgagcgg gacgccgctg gcggcgagtt cgcgcgcctg cgccagggcg
      181 ccctggcgcg gcggatcgaa gataacggcg tcgaggtgcg cgagttctgc aaccatgagc
      241 gggcgccgga acaggtcgcg cgtttcgatc gcgaccggct tgaggccggc agtcgccgca
      301 gcggcgcgcc cgagtgcggc aagcgcagca tcgtcgttgt ccacggcaca gacccgcgcc
      361 acctcggcaa gccgcagcgt aaacgggccg atgccggcga acagatcggc gacgctagcg
      421 gcgccggcgc acgcgtcgag gacgaaccgc gccagcaccg cctcacctgc ggcggtcgac
      481 tgcaggaacg cggccggcgg cagatgcacg atcgccttgc ccatgcgcaa ggtcggcggc
      541 cgcagctgcg cgatcatttc gccgtgccgg gtgaggcggg cgacatcgcg tttgcctgcg
      601 aggctggcca gcgccgtcat ggcgcccggc gacagtggtc cggatccgcg cacatcgatg
      661 tcgaggcccg cgtcgctcgc ggtgaattga atgtcgagcg gcttgcggat gggaccgatc
      721 gcttccgcaa tcgcccacgc cgcatcgatg gcgccgtcca ggctttttgc gagaaccgga
      781 cagcggtcga tcgccaccag ccgatgcgca cgcgcggcgg aaaagccgac ctcgagcacc
      841 tcatgcgtgc cccgccgggc gtggaatacc gcccggcggc ggccctcgcc gtgcgcgtcg
      901 atgagctcgg cgaccggcgc gtcgaggccc gcctgccgca gcgcttcgac tacgagatcg
      961 cgcttccagg cgcggtagcg cgcaaggtcc cagtgctgta cggcgcaacc gccgcatacg
     1021 ccgaaatgcg ggcagacggg agggacgcgc tcggcgcttg gcgtgtcgac gtgcaggaga
     1081 cggcggcgat ctggatgccc ggcgacggag tcgacttcga ccgtttcacc gggcaaggcg
     1141 ccgggcacat agattgggcc gtcggcgccg ccggcgacgc cgtcaccgcg atgcccgagc
     1201 ttctcgatga tgaggcgctc agccacgttc ggcctcgatg aagaactcgc gattgccgtc
     1261 gccgccgagg atcggggagg gcaccacgcc gcccacgttc catccttgca cggcgaggaa
     1321 cgcggcaatc tcgttgcaca cccggtgatg gaccgccggg tcgcggacga tgcccttctt
     1381 gatgtcacga cgcccgatct cgaactgcgg cttgatcaga gcaacaaggc tcgcgcgagc
     1441 ccggagaagc tttccgatgc cgggcagcac gagcttcagc gagatgaagc ttacgtcgat
     1501 ggtcgcaaag tccggcagct cgggcaggcg tgacgggtcg agcgtgcgga tgtcggctcc
     1561 ttcaatcgag acgatcgcat cgcggccgcg cagcgaggga tgaagctgat cgcggccgac
     1621 atcgaccgca tagacgcggg gcgcgccgcg cgcgatcagc acctgcgtaa agccaccggt
     1681 cgaggcgccg acgtcgaggc agacgcggcc gctgacctcg agcgagaagg aatcgagcgc
     1741 cgccacgagc ttgatgcccc cgcgtgacac gtaggggtgc tccggcgtcg cctcgatcgc
     1801 agcggcaacg gagagcggct cggacgcctt gcgcacaatg agcccgtcgg caatcacgcg
     1861 gccggccgcg atcgcggcct gcgcccgcgc gcggctctca aacaatccgc gctcgaccaa
     1921 aaggcgatcg gcgcgttggc ggatggtcat ggcaggccga gtatacggcg cggggcccga
     1981 tcttcgtcat ccgcgtctgg ccgaggtgac gctcaaaacg cccatggccg ggacgagccc
     2041 ggccatgaag aggaaaaagc acgctcagcc gcgcttatga ccgcgcgagc ttcacgacat
     2101 cgccgcgcac attctgcccg agggcctcga aagccttggc gacaatgctt ttggcgtcga
     2161 gcccggcctt ggcgtacatc gcgttgggcg aatcctggtc gatgaaaaag tcgggcagca
     2221 ccatcgcccg caccttgagt ccgcggtcga ggacgccatg ctcggcgagc tcctgcatgg
     2281 cgaaggcgcc gaagccgccg atcgagccct cctcgacggt cagcagcact tcgtgctcac
     2341 gggcaagacg cagcagcagc tcggtatcga ggggtttcgc aaaccgcgcg tcggcaaccg
     2401 tcgtcgacag cccgtgcgcc gccagctcgt ctgccgcctt gaggcactcg ccgagccgcg
     2461 cgccgaatga gaacagtgcg atcttggtgc cttctcgcag cacgcggccc ttgccgatct
     2521 cgagcggctt tccttcttcc ggcagcggca cgccgcgacc ctcgccgcgt ggatagcgga
     2581 gcgccgaggg acggtcgtcg atggcgacgg cggtcgctac catgtgcacc agctccgcct
     2641 cgtcggccgg cgccatcagt acgaaaccgg gcaaacaacc gagataggcg atgtcgaagg
     2701 atccggcatg cgttggccca tcggcgccga cgaggccggc gcggtccatg gcgaaacgca
     2761 ccggcaggcg ctgaatggcc acgtcgtgca ccacctgatc gtaggcgcgc tgtaggaagg
     2821 tcgagtaaat ggtcgcgaag ggcttatatc cttccgtggc caagccagcg gcaaacgtaa
     2881 tgccgtgctg ctcggcaatg ccgacgtcga aggtgcggtt cggaaactcc ttctggaaca
     2941 gatcaacgcc ggtgccggac ggcatcgccg cggtgatggc gacgatcttt ggatccttgc
     3001 gtgcttcctt aatcaggctc tcgccgtaca ccttctgata ggccggcgcg gcagctttcg
     3061 ctttcacctg cgttccggtg gcgacgtcga acttgacgac gccgtgatat ttgtcggcgg
     3121 atttttccgc cggcgcgtag cccttgccct tctgggtcac gacgtggacc aggaacggcc
     3181 cattcttggc gtcgcgcacg tttttcagga cgggcagcaa gtgatcgatg ttatggccgt
     3241 caatcgggcc aacgtagaag aagccgagct cgtcgaacag cgtgccgccg gtggccaggc
     3301 cgcgtgcata ttcctccatg gccagcgccc gcttttccag aaccttcggc agcagcttgg
     3361 caaatcggcg gatgccgttg cgcacgacgc gataggagcg gccggaaacg cggcgagcga
     3421 gatacgcgga cagcgcgccg accggcggcg cgatcgacat gtcgttgtcg ttgagcacca
     3481 cgatcagccg agagttcatc gccccggcgt tgttcatcgc ctcataggcc atgccggccg
     3541 acatggcgcc gtcgccgatg acggcgacga cgttgttctg cttgtcttcc agatcgcgcg
     3601 cgaccgccat gcccagcgcg gcggagatcg aggtcgacga atgggcggcg ccgaacggat
     3661 cgtattcgct ctcggcgcgt ttggtgaagc cggagaggcc gccgccctgg cgcaatgtgc
     3721 ggatgcggtc gcggcgcccg gtgagaatct tgtgcggata agcctgatgg ccgacgtccc
     3781 agacgagccg atcggtcggc gtctcgaaca cgtagtggag cgccacggtc agctcgatca
     3841 ccccaagccc ggcgccgagg tggccgccgg tcaccgccac cgcgtcgatg gtctcctgcc
     3901 gcaactcgtc ggcaagctgg cgcagctggc tgggttcgag ccgccgcagg tcggctggag
     3961 ttttgatacg gtcaagcaaa ggggttctgg agttcacgcg aatgctccgt tttatctatg
     4021 gcctaacggc gtttattggg gtctactgcg cgcccatcca ccggcacacg caaaactctc
     4081 agtctttaca ccatattagg ccgagaaagc aatttaccga cctgtcccag aagggaacta
     4141 cgggctggcg tccaacctga tacgctaggg cgcgggcggg agttttgcca tggcctgacg
     4201 ccgtttttgc cgcggcagta gtggcgaacc acgtcaaagc accattagtc ccctagatca
     4261 aggctggacg ggcgccgccg tggcggcgaa aaacgccgca aacgcatggg ttaacgcttc
     4321 gtggctctcg agacctaccg caaaaagcga cagttcgaca tgaccccgga gccgcgaggg
     4381 cgaaaggcgc cccgcggcgg tcaccgctat gtgattcaaa agcatgcggc gcggcggctg
     4441 cactacgatc tgcggctgga gctcgacggc gtgatgaaga gttgggccat aacccgcggc
     4501 ccgagcctcg accccaacga aaagcgcctt gccgtccacg tcgaggacca cccgatcgaa
     4561 tacaacgcat tcgagggcac gatcccgcag ggcgagtatg gcggcggcac ggtcatgatc
     4621 tgggatcgcg ggcgctggtt acccgaaggc gacccgcaca agggctacgc caagggccac
     4681 ctcgttttcg atctcgacgg cgagaagctg cacggccgct ggcatctggt gcgaatgcgt
     4741 acccgcgaca gcgaccgtca cgacaactgg ctgctcatca agggcaagga cgaggaagcg
     4801 cgaggtcccc gcgacaagga catcctcgag gaacggtccg gctcggtcgt ttccgggcgc
     4861 tcgatcgagg agattgccgc ggggaagggc ggaagaaaac gtgtctggca cagcaatcgc
     4921 ggcgccggcg cggacgagat ggaagacaag ctgcaatccg cgccgacagc aaagaaggca
     4981 gcgccgaagg ccgccgcgaa gccgaagcgg agagcgaagg ccgccacgaa gccgaagcgg
     5041 agagcgaaag ccgctgctct cgcggttgcg cgcatcggtg gcgaacaggc ggtgcgcgaa
     5101 cgcccggcag gaaagcgcgc ggctctgccc gactttgtgc cgttgagcct cgccgcgctc
     5161 tacgaaaagc cgccgagcgg cccggaatgg ctgcacgaga tcaagttcga cggctaccgc
     5221 atggaagcgc ggcttgatca cggcggggtg cggcttctga cacgccgcga gcaggactgg
     5281 acgcaccggt tcaaacccgt ggcggcggcg gttgccgcgc ttgcggccga gagcgcgctg
     5341 ctcgacggcg aagtcgtcgt ggaggacgag cgcggcgtga gcagcttctc gctgctgcag
     5401 acggacttga aggatgggcg cgccgatcgc ttcgtctact atgtcttcga cctcctatct
     5461 ctggacggcc gggatttttc gcgggagccg ttgatcgaac gcaaggcggc gctgttgcgg
     5521 ctgctgcaag ccggcgacgg aacgggggtg gtccgctaca ccgatcactt caacgagcgc
     5581 ggtgcgctca ttctggacaa agcctgcgag atgggtctcg aaggcatcat ctccaagcgc
     5641 cgcaacgcgc cgtaccgctc cgggcgttcg gacaacttcg tcaagagcaa atgccgcggc
     5701 ggccaggaac tgatcgtcgc cggctacgcg ccggcgaccg ccgtgccgaa cgccatcggc
     5761 gcccttatcg cggctatgaa cgagaacggc gagctgcgct acgccggccg ggtcggcacc
     5821 ggctatacgc agaagatggc gcgcgatctg ttcaagcggt tgcagccgct gcgcatcgaa
     5881 cagcgcccga tcaaactgcc ggcggacgaa cggcgcaagg acgtcgtctg ggtgaggccg
     5941 gagctcgtca tcgaggccgc gtccgcgggg atgactcacg gcgggatctt gcggcaggct
     6001 tcgttcaagg gcatccgcga agacaaggcc gcggccgagg tcgtgcccga ggagccggca
     6061 gcgatgaaaa atctggcgaa agatccggcc ccggagccgt ctaaaaattc gcggccggcg
     6121 cgtgcgggca agaataagaa tgccgaggtt tcgaacgttc gcctgaccca tcccgaccgc
     6181 gtgtattggg ccgacgtcgg cgtgaccaag aaggatctcg ccgattacta cgtctccgtt
     6241 tgggattgga tgaaaccgca ccttgtcggc cgcgcgctcg cgatcgtgcg ctgtccggac
     6301 gggacgcggg gcgagtgctt ctttcagaag cacatcgccg cgaacgtgaa atcctcgccg
     6361 ctgcgccacg tcgtccccgg caaggaccac gacgtgattg cggtggaggc ggtcgacgac
     6421 ctcgttgcgc tcgcgcaatc aggggcgctg gagatccacg tgcgcggctc gcggctcgac
     6481 agcctggaaa cgtgcgaccg catcgttttc gatctcgatc cgggggaggg cgttgcctgg
     6541 acggaggtga tcgccgccgc gcgtgaggtc cgcgagcgcc tcaaggcgga aaagctcgag
     6601 agcttcgtca agctttcggg cggcaagggc gtccacctgg tggcgccgat cgcggatgcc
     6661 gattgggata cggccaagct cttcacccag cgcatcgtca ccgggatggc catcgacaac
     6721 cccaaggtct acctcgccaa gatgaccaag gcgctgcgca agggccgcat cttcatcgac
     6781 tatttccgca actcgcggga agcgacttcg gtcgctgcct attcgacccg cgcgcgcgac
     6841 ggcgcgccgg tctccgcgcc ggtcacctgg gagcgcctgt cgcgcacgaa cggcggcaat
     6901 gacttttccc tgctcgatct caagaagcgc ctcaaggaag atgcctgggc cgagatcggc
     6961 aaggtgcggc agaagctgcc cgagaccgtt tcgccgcgcc ggcgctgacg acagcggcgg
     7021 ccgcatcaaa tcatttccgc gcggcgtcct gcaggatcgc aatcatgcgg tcgacgactt
     7081 catcgagagt tgaacgcggc ggaaatgtta tcctttgctc ggggtcttcc tcccgatgtc
     7141 catcgcgatt cgtccgatag ccaacgattt gatagctttc gtccttctcc ttgatgctcc
     7201 aactcgacat gccgcgcgcg aatgccgacc acgtcttaac gtctgcgtat ttcagcacaa
     7261 cgggctgcgg acgactgccg cgcggataat gcggcgtcgg tggattgcct ctcgcgatcg
     7321 tcgccttaag agcctcgcgg atagcatcag ggttagagac ggggacaacg gcaaccggct
     7381 caatgtcgcg atgcaaaccc ggatgtacgt tgcccgacgt cggcacgaac accgagcctt
     7441 tcctcaaatc aaggtggcaa aacataacgt tctgctcagg gcgcggctcg atacgttgag
     7501 cggcggcaat gacgagaaac taccccgcga gcttgaagcg ctcggccttc ggctcgaagc
     7561 gcgagcggaa aatttctgcg tcgagcgggt cctcgaagca gtagcgcacg aacgcggcgt
     7621 agtcgtcctc gacatacatg tcgaacttgc cgacatactt gatgaggaaa ttcaggatct
     7681 cgctgtcgtc ggcgagctgc cggcgcggga gaaccacctg ataggggcat tcctcgtcga
     7741 gcttgcgcag ccaggcgctc ttcttttccg cgtccatcgt agcctctacc cttgactcgg
     7801 accgtatatt gttctctttt tgttctcagg agtcaagcgg taattgagaa ggccggctgc
     7861 catggcggtc gagaccatag gcgacgctca ttccctcggc tggcgcgtca tcgcccgctg
     7921 cacgcacggc cgcgaggacg gcccgcgcac gcagtcgaat cacgcatgca cctaccgcaa
     7981 ggaactggac atggagacat tggtgtggac gcgggggagg gcgtttccgt tgtctcgcct
     8041 cgaaagccgg ctgcgctgcc cgcgctgcgg gtcgcgcgat gtggtcgtgc tgtatcagcc
     8101 gccgagcagg gccgtggtgg gctagccccg caaactcatc tccgcgacaa ccgccgccgg
     8161 ttggcgccga cgcgcttttt gtacgcgttc agaacttttc cggcgacgat ctttggccgg
     8221 cgcccggtca aaatcgcggc cgtggccgcc gtctgagcgt cggtgaaggc gccgaccttt
     8281 tccgcgacca tgcggttcgc ttccgcccgt ccgcgcgcgc cgccagccgc cagccgcatc
     8341 atccgtaacg caatgacgct ctgggcctcg acgccgagct gcatggtttt gaaggcgagc
     8401 gtgagccagg gattgaacac cagagctttc ccgggttttt atcgatagtg atggacggta
     8461 acgtaggggc agcgaagggg ttccgaggac aatctcatga gcgacgacat ccacgaggtt
     8521 tacgccatcc gctacggcca tcacgcgcgc cggtcgccgg agaacttcat cggtggcgat
     8581 ccgcacgaca tgctgcagcc gctcgacttc ttcgtgtggg ccatcgtggg gccgtcaggc
     8641 gcgatcatcg tcgataccgg cttcgacgag gcgatgggcc ggcgccgcca gcgcgagatc
     8701 gtcaagcccg tgcgcgacgg cctgctcgcg cttggagtcg cccccgagag cgtcgaggcg
     8761 gtcgtcgtca gccacatgca ctacgaccat tgcggcaact acgatctgtt cccacgcgcc
     8821 cgctatcacc tgcaggatcg ggagatggcc tacgccacgg gacgatgcat gtgccaccag
     8881 cagacgcgcc tgccgttcga ggtcgaggac gtcgtcgcca tggtgcgcaa ggtcttttcc
     8941 ggccgcgccg cctttcatga cggcgcggac gaggtcgtgc ccggtgtcac ggtgcaccac
     9001 atcggcggcc attcgaaggg cctgcagagc gtgcgggtaa agacccggcg cggccacgtc
     9061 gtcctcgccg ccgacgcctc acatctttac gcccacgtcg acggcggccg ggtgttcccc
     9121 atcgtctaca acgtcgcgga ggtggtcgag ggctacgaga ccttgaagaa actcgcgacc
     9181 tcgccgggcc acatcgtgcc tgggcatgac ccgctggtac tcacgcgcta ccccgccgcc
     9241 aagcccgggc tcgaaggctg gatcgcgcgc ctcgacgccg agcccaggga ccggtgaagg
     9301 cgccagcaag ccggcgagga aaatttcgct gccggccggc ccgcaaattc gggctgcggc
     9361 gcttgcgacg ggaccgacga tgaccgctcg accttctctt ccggcgctgg aacggctggt
     9421 cgcagctcat cgtctgccgg aagcgctgga catggcgctg aggattctcg cggccgtcga
     9481 tagccgcgcg gggcgcatcg atggcgtggt cgcgggcccg tcctatcccg acggcggcga
     9541 agaggacgtt gcgctgatct tcgccacccg ctttgccgcg gtgttcggac agctgattac
     9601 cgcgggggat ctgaaaatca ccgcgaccga ctacgagcgg ctgttgtcgt actaccgctg
     9661 gatcgacctc atcttttcac tcagcggatt tcgcacgtcg gaccatctcg tccgcctcat
     9721 cgccaaggac gcgggcggcg gccggctgag ctttcaaggc accgattacc tgcgcctcct
     9781 taccgtcctc accatgaact cattcatcca cgtcgatttc gatcgcttct ggcgaaccaa
     9841 ccgcgtggcg tcggcgatcg cgttcttcaa ctacatcagc tcgcgttacg tgttttcgcg
     9901 gcgcgccttc gcattccgcg agcgcctgct ggaatggatt ccggagcggc tcgcggaggt
     9961 gaaattcgga gccatgacgc tcgcacgact gccggaagtc tacatgcact gcagctacgc
    10021 cttgaccgcc aggaagcatg cgatcaagcg gccgctgatg gaacaaatgc gccgcgcctg
    10081 cctggaagcc ggcgtgatcg aggccgaggg cgcgatcccg ccccacggcg ctgggcgcgc
    10141 gacggtcgtc gtggtcggag agcgcttcgc ggcggggcac gccgtgtttc gcagccactc
    10201 gcgcgccgtc cgggcgctgc gcgcgcgctt ccacgtcgtc ggcgccgttc accccaaccc
    10261 gaccagtgcc ttgatcgccg actatttcga cgagtgcatc gcctttccca cgggagactt
    10321 cttcgcctcc gtccgc
//
LOCUS       DATMQB010000049         6668 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3732428, whole genome shotgun sequence.
ACCESSION   DATMQB010000049 DATMQB010000000
VERSION     DATMQB010000049.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6668)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6668)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6668
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3732428"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..585
                     /locus_tag="VNY79_01725"
     CDS             <1..585
                     /locus_tag="VNY79_01725"
                     /inference="COORDINATES: protein motif:HMM:NF014647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HWX71197.1"
                     /translation="AARMSKTHKVAGVYGLQGVPNITAQAGGFRICATKAGAQVTILY
                     IKNMEDAAEAKEAALSLIAQGADVITGKLNAAETGLVQAAKEKQIYVTGRGFDQTKIA
                     PDLVLTNIIEDWPGMFGKTADRVKDGKLFGTFVLYGYDTAPVTGAKLEYLEGKVFNPI
                     VPEAVVKELNDLAAQFASGAMKIAPTVNDARSGG"
     gene            797..2257
                     /locus_tag="VNY79_01730"
     CDS             797..2257
                     /locus_tag="VNY79_01730"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX71198.1"
                     /translation="MVRTFGALRANDGIDLDVQPGQILGLLGENGSGKSTLMKVLFGM
                     LPPDAGTIIFRGRELSRHHPREAMAAGIAMIHQHFMLIEAMTVVENVMLGWQQAGRVI
                     RTAAIAAQVREASRRFGLHLDPAALVATLPLGRRQRVEILKAILRDAELLILDEPTSN
                     LAPTEIADLLTILRRLRAEGKGIIFITHKLPEVLEICDEVVVLRDGRVSGRAPVAGAS
                     RARLAEMMVGRDLARAHKPVPRTPGGVRLSVSDLTGPGFGSLSLDVRGGEILGVAGVD
                     GNGQIELTDTLAGMRRAQAGRIVLDGRDITHAPVAARVQAGLAYIPADRASTALVRGM
                     SVAENLMLRDSGSSPYARGPFLTPVPAATKAQKLMTEYDIRAAGPSAVVMRLSGGNQQ
                     KIVVARELDRAPAVLVAHQAAWGLDPGATRFVLDQVIALRDAGAAVVYVSSELEEVLE
                     ISDRIAVMAGGQFAGEMPTAEADLKQIGLWMAGRPE"
     gene            2254..3312
                     /locus_tag="VNY79_01735"
     CDS             2254..3312
                     /locus_tag="VNY79_01735"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX71199.1"
                     /translation="MMAPVSSLPITAFKGRAFRLQLREGLAGRILLAVLLSILCAAAL
                     VALSGHNPVEAFGAMAVGAVGSPHQIGAALNRTTPYLLAGSGVALCFRAGIINIGAEG
                     QIAVGGIGATAAALAFPLDAPFAVAASLLSAAAAGAVWAGFATAIHLGRRVHEVLTTL
                     LLNFVALLLVQQVLAGPLGLFGAGFLQSPELPRAAWLWRMPSFGAHSGFLIAVVAAAS
                     LSFVLWRTRFGFALRVAGSSRPAAAYAGFSLPRLTWSVMLLAGALAGLAGGIEVLGVH
                     RRLIEGFSLGFGFKAVTVALLGALEPLAIVPASLFVGLLEAGSLSMQRQVGVPSALVV
                     VIEGLTMLFVLAATVRRA"
     gene            3309..4220
                     /locus_tag="VNY79_01740"
     CDS             3309..4220
                     /locus_tag="VNY79_01740"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX71200.1"
                     /translation="MTEFLAAAIRIATPLMFAALGGILSERAGVFAVGLEGMMLAGAF
                     AAVVGTWWSGDAGAGVLLATVAGAAIGLMVATVAVRFRADNMVTGLTANILALGLTSY
                     LLRVLAGGGQPVAIHLTPLAAWPIPGLADLPVLGPLLFVQPPLTYLVVLGCLMLALFL
                     RHTQAGLTLRASGENPEAVFAAGGNPLRVRMLAVIACGAIAGLGGAVLSLQQVGTFTD
                     GMTGGRGYLALASLIVGRWDPWAAAAACLVFGMAEAFELRLQSFGVPVSSYIVHMAPY
                     LLALAVLAGLGRSSKLPAAIGQPLQSD"
     gene            4231..5616
                     /locus_tag="VNY79_01745"
     CDS             4231..5616
                     /locus_tag="VNY79_01745"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HWX71201.1"
                     /translation="MEEQICEISAGLRRGTLTAEALLDRCLERIRRLDPQLNSFVALD
                     EAGARAAAKASDARLAGGSARSALEGIPLSVKDNIHAAGLPTTWGSRALAGVLPPGDE
                     LPVARLRAAGAVVVGKTNVPELTLEGYTKNDLFGVTRNPWDTRLTPGGSSGGAAAGVA
                     AGLVPAAIGTDGGGSVRRPACHTGLVGWKPSTGRIPRVDGLPAILTDFETIGTLTRSI
                     DDALLLDSAMAGPDARDRRSLYAAAPQRPEGRWRIIYIPQFGDAPVDPEVTSVTAGVA
                     EALAREGYQVQEEKVFFDLEDAARIWHVISRAGVAWLMGWGDGRLAAMAGASVRAMAA
                     DGAKLTGADYIDALERVAAFRRRCAELFARTDFVLTPTAAALPWPAAIPYPDRIADRA
                     AGPRDHAVFTGWVNIAGLPAISLPVGVSQLGLPIGVQFVAGFAGDSALLAFAHEFSRK
                     NPPPPLPVLTP"
     gene            5690..6067
                     /locus_tag="VNY79_01750"
     CDS             5690..6067
                     /locus_tag="VNY79_01750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71202.1"
                     /translation="MRLAVPATLFAIMTLWISCGAGSAQTLPQVGETWQLKIDGFGCA
                     KNDDLDQLLRLHHDDDQTAFSTLLLGFRGEGRCQDLPKGLEVVVERIEPYGMLNDRPC
                     VRQSGSSDCWYTSPAFLRPTSTR"
     gene            complement(6081..6461)
                     /locus_tag="VNY79_01755"
     CDS             complement(6081..6461)
                     /locus_tag="VNY79_01755"
                     /inference="COORDINATES: protein motif:HMM:NF024621.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4031 domain-containing protein"
                     /protein_id="HWX71203.1"
                     /translation="MVVYVDQAMWAWQGLKWCHLLADDLDDLHRFAASLGIKRTSFQA
                     APKSSVPHYDLTAYERKQAIARGAVPCTRTEIVIIARRLRSKGLSTTQPHSDRGRERS
                     ARNSAPLSHCRVRKRAGRASCDQD"
BASE COUNT         1037 a         2148 c         2245 g         1238 t
ORIGIN      
        1 gccgcgcgca tgagcaagac ccacaaggtc gccggcgtct acgggttgca aggcgtcccc
       61 aacatcaccg cgcaagccgg cggcttccgc atctgcgcga caaaggccgg cgcgcaggtg
      121 acgatcctct acatcaagaa catggaggac gccgcagaag ccaaggaggc ggcgctgtcg
      181 ctgatcgccc agggagccga cgtgatcacc ggcaagttga acgccgcaga gaccggcctc
      241 gtccaggcgg caaaggaaaa gcaaatttac gtcaccggcc gcggctttga tcagaccaaa
      301 atcgcgcctg acctggtgct caccaacatc atcgaggact ggccgggcat gttcggcaag
      361 acggccgatc gggtgaagga cggcaagctg ttcggcacct tcgtgctgta cggctatgac
      421 accgccccgg ttaccggcgc aaagctcgaa tatctggaag gcaaggtatt caatccgatt
      481 gtgcccgaag cggtggtcaa ggaactcaac gatctggcgg cacagtttgc ctcgggtgcg
      541 atgaagatcg ccccgacggt aaatgatgcc cgtagtggag gctaggcgaa cgcgcggcac
      601 tccgcgcgga ttgcaacgcg gcgccgcgcc gcgatccgtg gcgcgagcgc cgaagcgcgc
      661 acaacgccgg gcgaagcaaa gagacgcagc gcccggctcg gcagatagcg taaatctgcg
      721 ggcaacgtcg cgcccgcaga ttcatgtctc gcccaatccg gcctagtcca tggctccgct
      781 cctgaaaatg cgtggcatgg tgcgcacgtt cggcgcattg cgggccaacg acgggatcga
      841 tctcgacgtg cagccgggtc agattctcgg tctgctcggc gagaacggtt cgggcaaaag
      901 cacgctgatg aaagtgcttt tcggaatgct gccgcccgat gccggcacta tcatcttccg
      961 cggccgagaa ctttcccgtc accatccccg cgaggcgatg gcggccggca tcgcgatgat
     1021 tcaccaacac ttcatgctga tcgaggcgat gacggtggtg gagaacgtga tgctcggctg
     1081 gcagcaggcg gggcgcgtta tcagaaccgc cgccatcgcg gcgcaggtgc gggaagcaag
     1141 ccggcgtttc ggtctccacc tcgaccctgc cgcgctcgtc gccacgctgc cgctgggccg
     1201 ccggcaacgc gtcgagatcc tcaaggcaat cctgcgcgat gccgaactcc tgatcctcga
     1261 tgagccgacc tcgaacctgg cgccgactga aatcgccgat ctgctgacga ttcttcgccg
     1321 cctgcgcgca gaggggaagg gcatcatctt catcacccat aaattgcccg aagtcttgga
     1381 gatctgcgac gaagtggtgg tgttgcggga tggccgcgtg tccggtcgcg cgccggtcgc
     1441 cggggcgagc cgggcccggc tcgccgagat gatggttggg cgcgatctcg cgcgggcgca
     1501 caaacccgtt ccgcgtacac cgggcggcgt gcgcttatcg gtcagcgatc ttaccgggcc
     1561 gggatttggt tctttgagtt tggacgtgcg gggtggggaa attctcggcg tcgccggcgt
     1621 cgacggcaac gggcagatcg agttgaccga cacactggcc gggatgcgcc gcgcgcaggc
     1681 gggccggatc gtgctcgatg ggcgcgacat cacgcatgcc ccggtcgccg cgcgggtgca
     1741 ggcgggcctg gcgtacattc cggccgatcg cgcctcgacc gcactggtgc gcgggatgtc
     1801 cgttgcagaa aatctgatgc tgcgcgacag cggcagctcc ccttatgccc gcggcccatt
     1861 ccttaccccc gttccggccg cgaccaaggc gcaaaagctg atgacggaat acgacatacg
     1921 cgccgcaggc ccatcggccg tcgtcatgcg gctttcgggc ggcaaccagc agaagattgt
     1981 ggtcgcgcgg gagctcgacc gcgcgccggc ggtgctggtg gcgcatcagg ccgcctgggg
     2041 cctcgatccc ggcgccaccc gtttcgtgct ggaccaggtc atcgccttgc gcgacgctgg
     2101 cgccgcggtc gtctatgttt cgtcggagct cgaggaggtg ctggagatca gcgaccggat
     2161 tgcggtgatg gcaggcggcc agtttgcggg cgagatgccg accgccgagg cggacctcaa
     2221 gcagatcggt ctctggatgg ccgggcggcc ggaatgatgg cgccagtctc atcgttgccg
     2281 atcacggcgt tcaagggacg agccttccgc ctgcagctgc gcgagggatt ggccggacgg
     2341 atactgctcg ctgtactcct ctctatactg tgcgccgctg cgctcgtcgc cctgtcggga
     2401 cacaatccag tggaggcatt tggcgcgatg gcggtagggg ccgtcggatc gccgcatcag
     2461 atcggtgcag ccttgaaccg caccacgccc tatttgctcg ccggcagcgg cgtcgcgctg
     2521 tgctttcgcg ccggcatcat caacatcggc gccgaaggcc agatcgcggt cggcggcatc
     2581 ggcgcgacgg cggctgcgct tgcctttccc ctcgatgcac cgtttgccgt cgcggcgtcg
     2641 ctgttgagtg cggctgccgc cggagcggtg tgggcgggct tcgccactgc gatccacctg
     2701 ggccggcgcg tgcacgaagt gctgacaacc ttgctgctga attttgtcgc cctgctgctg
     2761 gtgcagcagg tactggccgg gccccttggg ctgttcggtg ccggctttct tcaatcgccc
     2821 gagctgccgc gggcggcgtg gctatggcgc atgccgagtt tcggcgcgca ttccggcttt
     2881 ctgatcgcgg tcgtggctgc cgcaagcctt tccttcgtcc tttggcgcac gcgcttcggc
     2941 tttgcgttac gcgtcgccgg cagctcccgg ccagcggcgg cctatgccgg gttctcgctg
     3001 ccgcgcctta cgtggagcgt catgctgctg gcgggcgcgc tggccgggct cgccggcggc
     3061 attgaagtgc tgggcgttca tcgccggctg atcgagggct tttctctcgg cttcggcttc
     3121 aaggcggtga cggtcgcatt gctcggcgca ttggaaccgc tggccatagt tccggcatcg
     3181 ctgttcgtcg gcctgctcga ggcgggatcg ctatcaatgc aacggcaggt cggcgttccg
     3241 tcggccctcg tggtggtgat cgagggtctg acgatgctgt ttgttcttgc agccacagtc
     3301 cgccgcgcat gaccgagttc ctcgccgccg ccattcgcat cgcgacgccg cttatgttcg
     3361 ccgcactggg cggcatattg tcggagcgcg ccggcgtttt tgccgtgggc ctcgaaggca
     3421 tgatgctcgc cggcgccttc gccgccgtcg tcggcacatg gtggagtggc gacgccggcg
     3481 ccggcgttct cctcgccacg gtagcaggtg cggcgatcgg gctcatggtg gcgacggtgg
     3541 ccgttcgctt ccgggccgac aacatggtca ccggcctgac cgccaacatc ctggcgctcg
     3601 gcctgacgag ttatttgctc cgcgtcctcg ccggcggcgg tcagccggtc gccattcatc
     3661 tgacgccgct cgccgcctgg ccgatccctg gcctcgcgga tctacccgtg ctcggcccgc
     3721 tgctcttcgt gcagccgccg ctcacctatc ttgtggtgct tggatgtctc atgctcgcgc
     3781 tgtttctccg ccacacccag gccgggttga cgctgcgggc cagcggagaa aacccggagg
     3841 cggtgtttgc cgccgggggc aaccctttgc gcgtccgcat gctcgcggtt atagcctgcg
     3901 gggcgatcgc cggattggga ggggcggtgc tctcgttgca gcaagtcggc accttcacgg
     3961 acggcatgac cggcgggcgc ggctatctgg cgcttgcgtc gctgatcgtc ggacgctggg
     4021 atccgtgggc ggcggcagca gcgtgtctgg tgttcggcat ggcggaggcg ttcgagttgc
     4081 gcttgcagag ttttggcgtg ccggtcagct cgtacatcgt gcatatggcg ccgtatctgc
     4141 tcgcgcttgc cgtattggcg ggtctgggcc gttcctcgaa actgccggcc gcgatcgggc
     4201 agcctctgca aagcgactga cgggaaggcg atggaagagc aaatttgcga aatttccgcc
     4261 ggcttgcgcc gcggcacctt gacggccgag gcgctcctcg accgctgctt ggagcgtatc
     4321 cgccggcttg atccgcaact caacagcttc gtggcgctgg acgaggccgg cgcgcgcgcc
     4381 gccgcaaagg cgagcgacgc gcggctggcc ggcggctcgg cgcgatcggc gctcgagggc
     4441 ataccgcttt cggtcaagga caacatccat gccgcgggtc tgccgacgac ctggggtagc
     4501 cgcgcgctcg ccggcgtcct gccgcccggc gacgaactcc cggtggcgcg gttgcgcgcc
     4561 gccggcgcgg tcgtcgtcgg caagaccaac gtgccggagt tgacgctcga gggctacaca
     4621 aagaacgatt tgtttggcgt cacgcgcaat ccgtgggaca cgcgcctcac tccgggcgga
     4681 tcctccggcg gcgctgctgc cggtgtggcg gccggattgg tcccggcggc gatcggcact
     4741 gacggcggcg gctccgtgcg ccggcccgct tgtcacaccg gtcttgtcgg ttggaaacca
     4801 tcgaccgggc gtattccgcg cgttgacggg cttcccgcca tcctgaccga cttcgagacg
     4861 attggaacgc tgacgcgctc gatcgacgat gcgctgctgc tcgacagcgc catggccggc
     4921 ccggacgccc gcgaccgccg ctcgctctac gccgctgccc cgcagcggcc ggagggccga
     4981 tggcgcatca tctacattcc gcagtttggc gatgctccgg tcgatcccga agtgacctcg
     5041 gtcaccgccg gcgtggcaga agctctggcg cgggaaggct accaagttca ggaggaaaag
     5101 gtcttctttg acctcgagga cgcggcgcgc atctggcatg tcatctcgcg cgccggcgtc
     5161 gcctggctga tggggtgggg ggacggacgg ctcgccgcga tggccggcgc ttcggtgcgc
     5221 gcgatggcgg cagacggcgc aaagctcacg ggagccgatt acatcgatgc gctcgagcgg
     5281 gttgccgcct tccgccgccg ctgcgccgaa ctgttcgcca ggaccgattt cgttctcacg
     5341 ccgacggccg ccgctttgcc gtggccggcc gcgataccct atccggatcg gatcgcggat
     5401 cgcgcggcag gcccccgcga tcatgccgtg ttcacaggtt gggtgaacat tgccggcctt
     5461 ccagcgatca gcctgccggt aggggtctcg caactcggcc tcccgatcgg cgttcagttc
     5521 gtggccgggt tcgctggcga ctcggccttg ctcgcattcg cccatgagtt ctcgcgcaaa
     5581 aatccgccgc ctccgcttcc ggttttgacg ccgtgaaagg cctcccggca gtttcaagct
     5641 ggcgtttcag ctgcagcggt gcgcgcgcac ggaaatagga tgacggcaaa tgcgcctcgc
     5701 ggtcccagca acgctgttcg cgatcatgac gctctggata tcctgcggcg caggatcagc
     5761 acaaaccttg ccgcaggtag gagagacatg gcagttgaag attgatggct tcgggtgcgc
     5821 caaaaacgac gatttggatc agttgctgcg tttgcatcat gacgacgatc agacggcctt
     5881 ctcgacgctg ttgcttggat ttcgcggcga agggcggtgc caggacttgc ccaaaggtct
     5941 cgaggtcgtc gtcgaacgca ttgagcccta tggaatgctc aacgatcgtc cttgcgtaag
     6001 acaaagcgga tcttctgatt gttggtatac gtcgcccgcg tttctgcgac caacaagcac
     6061 ccgttaacgc tgcggattct ctaatcttga tcgcacgacg cacgaccggc tcgtttgcgc
     6121 acccgacaat gactcaacgg agccgagttt cgagctgacc tttctcggcc tcgatccgag
     6181 tgaggttgcg ttgtgctgag ccccttggac cggaggcggc gcgcgatgat gacgatttcc
     6241 gtccgggtgc acgggaccgc gcctctggcg atggcctgct ttcgctcgta agccgtcaga
     6301 tcatagtgcg gcaccgatga cttcggtgcg gcctgaaacg aagtccgttt gatccccaat
     6361 gacgctgcga agcgatgcag gtcgtcgaga tcatcggcca ggaggtggca ccacttcagt
     6421 ccctgccagg cccacatggc ctgatcgaca tatacaacca ttgcatgttt ggcccaacta
     6481 ccgagcggca gaatacacca gccaaagcag cgaaagcgac ggcaaggcac ggcgcgccga
     6541 cggtcaactc atgcgcacca gcttttgcag cgatcgcaac tcgtgatccg gcttcgtgcc
     6601 aaagaggatt ggccaatagg tgttggcgac ttcggcgaca tagatgtcgc cgcgagaatc
     6661 cagcgcga
//
LOCUS       DATMQB010000050        14822 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2492984, whole genome shotgun sequence.
ACCESSION   DATMQB010000050 DATMQB010000000
VERSION     DATMQB010000050.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 14822)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14822)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14822
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2492984"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            112..879
                     /gene="surE"
                     /locus_tag="VNY79_01760"
     CDS             112..879
                     /gene="surE"
                     /locus_tag="VNY79_01760"
                     /EC_number="3.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008252 - nucleotidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5'/3'-nucleotidase SurE"
                     /protein_id="HWX71204.1"
                     /translation="MRILVTNDDGIHADGLDVCEKIARALSDDVWVIAPEYDQSGVAH
                     SLSLNDPLRLRQVAERRFAVRGTPTDCVIMGARHVLNGKGPDLVLSGVNRGRNAGEDV
                     IYSGTVAGAVEGTVIGVPSFALSQAYASRSGRPPYWETSLQHAPDIIRRVVAEGIPRD
                     VLINVNFPDCAPDEVKRIAVAPQGRRRQERLHIDERRDGRGNPYYWITYARLSAVKAA
                     PDGTDLAALDEHCIAVTPLKLDMTDEPYMTKLAGLFE"
     gene            complement(1047..1430)
                     /locus_tag="VNY79_01765"
     CDS             complement(1047..1430)
                     /locus_tag="VNY79_01765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HWX71205.1"
                     /translation="MTFEGKSAESKRVLVVEDELMIRMLLQDMLTDLGHAIAAETGRI
                     EEALALAKQAEFDVAILDVNLNGQPVTPVVEVLLERGVPFVFATGYGQRGVPEPYRQT
                     PTLQKPFQADALAEAIKTVTARARN"
     gene            1738..2361
                     /locus_tag="VNY79_01770"
     CDS             1738..2361
                     /locus_tag="VNY79_01770"
                     /EC_number="2.1.1.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004719 - protein-L-isoaspartate
                     (D-aspartate) O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-L-isoaspartate(D-aspartate)
                     O-methyltransferase"
                     /protein_id="HWX71206.1"
                     /translation="MEFQLALRRRGISDQAVLRAMDEVPREHFVAPEFIESAYADHAL
                     PIACGQTISQPYVVAYMTEQLQVGPQHRVLEVGTGSGYQAAILSRLAREVVSVERYRT
                     LAETARQRLRTLGYANVTIIVGDGFAGAPEQAPFDRIIVTAAAENIPPALVEQLGANG
                     KIVLPLGPRNGTQHIVKLNRTAGGALERENLIAVRFVPLLPGQAREL"
     gene            2663..3790
                     /locus_tag="VNY79_01775"
     CDS             2663..3790
                     /locus_tag="VNY79_01775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing M23
                     family metallopeptidase"
                     /protein_id="HWX71207.1"
                     /translation="MPHLAGPNGEGTSGGGRGMGSYQPGNAETTGSLTSASPPPTWTW
                     EGGKPIVVARGETLESISRRHGVPVAAIMEANSITSPAMVHPGEHLVIPRRQGPAATA
                     SAPQTRIATNAHAIPSTVPVGPPRNALAAGSGTHVVAPGETLHSIARLYGKPVMMLAK
                     ANNIPPNTMVKVGERIVIPGVRGPAIAAAPAAAVAPAAPRAEAPAATSALPKTQNVAT
                     AEAPRSARVASPAAAPPVQETAVKAAEPAGAVAGFRWPVRGRVIAGFGPKSNGLQNDG
                     INLAVPEGTPVKASEDGVVAYAGNELKGYGNLVLVRHSNGFVTAYAHASELMVKRGET
                     VKRGQVIAKSGQTGSVTAPQLHFEIRKGATPVDPAQYLNGA"
     gene            complement(3859..4845)
                     /locus_tag="VNY79_01780"
     CDS             complement(3859..4845)
                     /locus_tag="VNY79_01780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HWX71208.1"
                     /translation="MRKAMSNSPSSFRNKAASAAVAGAPKARPARDGVDEVLERIADA
                     LERLAPPPPPAPDFSAAAAFVWHPEGRRLAAVRRINRVEMSLLKGIDRVRDLLLENTE
                     RFARGLPANNALLWGARGMGKSSLVKAAHAAVGAAHPDAGLKLVEIHREDIETLPELM
                     GLLRSASQRFIVFCDDLSFDADDTSYKSLKTMLEGGIEGRPENVIFYATSNRRHMMAR
                     DMIENERSTAINPGEAVEEKVSLSDRFGLWLGFHRCSQDEYLAMVEGYVVRYRVPIKG
                     EELRGEALEWATTRGARSGRVAWQYVQDLAGRLGVRTDDAGADDGDLTTDDR"
     gene            5012..5353
                     /gene="yajC"
                     /locus_tag="VNY79_01785"
     CDS             5012..5353
                     /gene="yajC"
                     /locus_tag="VNY79_01785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HWX71209.1"
                     /translation="MLITPAFAQGSLFGGADSSGMITSLLPLILIVVIMYFLVLRPQQ
                     QRAKQHRDMVKALRRGDSVVTNGGLVGKVTKVVDDDQIEVEIADGVRVRQMRSMVSEV
                     RAKGEPVKDDS"
     gene            5421..7016
                     /gene="secD"
                     /locus_tag="VNY79_01790"
     CDS             5421..7016
                     /gene="secD"
                     /locus_tag="VNY79_01790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecD"
                     /protein_id="HWX71210.1"
                     /translation="MLFFTRWKAAGILLTALVVCLFAVPNFFPENVIRKWPAWAQRHI
                     VLGLDLQGGSSLLLEVDTNAVRKDRLLSLNDDVLRILRQSRILFTGRAIHGNSVEVRI
                     TRESDIPLALEKLRELSQPLSGILGGSGQRSVQVTESGGLITLTPPDVAVIERIRQTV
                     DQSIQIIERRVNQLGLVEPTIQRQGTDRILVQVPGLPDPSRLKELIGKTAKLDFRMLD
                     LSETAEQAMAGQVPADSEILEGEKGQGKYLVEKRILVSGGDLIDAQPGFDQRNGEPIV
                     SFRFNSIGARKFAEATQQNVGKPFAIILDGKVISAPVIREPILGGTGQISGNFTVEQA
                     NDLAILLRAGALPVALTVVEERTVGPGLGQDSINAGEHAAYLGAALVILFMLVTYGLF
                     GLFANLAVAVNVAMIFGVLSMLSATLSLPGIAGIVLTVGIAVDSNVLIYERIREEVRA
                     GRTAINAIDAGFSRALATILDSNITTFIAAAVLFYIGTGPVRGFAVTLGIGILTSLFT
                     AFTLTRLIVAYWVRMWRPRTVPI"
     gene            7172..8137
                     /gene="secF"
                     /locus_tag="VNY79_01795"
     CDS             7172..8137
                     /gene="secF"
                     /locus_tag="VNY79_01795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018408104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031522 - cell envelope Sec protein
                     transport complex [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecF"
                     /protein_id="HWX71211.1"
                     /translation="MRFRRISFPISAALSIAAILLYFFHGLNFGIDFVGGTLMEVQTK
                     NGPADLASMRATIGALNLGEVQLQQFGAPNDVLIRLSEQPGGDAAQQVAVQKVREALG
                     GTVEYRRVEVVGPSVSTELLSYGTIGLVLAIGAILIYLWFRFEWQFALGAMIANVHDL
                     VLTVGFMSLTRIDFDLTSIAALLTILGYSLNDTVVIYDRIRELLRRYKRMPMPDLLNA
                     SINATLSRSIVTHLTVSLSLLALILFGGQAIRSFTATMMFGVVLVGTYTSVFIASPIL
                     IYLGVGRTRQGEPEDAETATPTPPSTVPEPSPKGSVPRQRARARR"
     gene            8137..8508
                     /locus_tag="VNY79_01800"
     CDS             8137..8508
                     /locus_tag="VNY79_01800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MTH938/NDUFAF3 family protein"
                     /protein_id="HWX71212.1"
                     /translation="MDAPHLPRQALIDAHGGGGFRFAGLSHRGSLLCLPDGIWAWPVT
                     EPAQASEETLARVFAQTGELDFFVFGTGAAPWMMPEPLRARFRAAQVSLDTMTTGAAV
                     RTYNVMLMENRRVGAGLIAIA"
     gene            8528..9364
                     /locus_tag="VNY79_01805"
     CDS             8528..9364
                     /locus_tag="VNY79_01805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phytoene/squalene synthase family protein"
                     /protein_id="HWX71213.1"
                     /translation="MQDAFAYCAELVRTADRDRFLASLFAPADRRDALHALYAFNIEV
                     TRVREVAREPLPGEIRLQWWSDVLNGEREGEAQANPVAAALLATVTRHRLVVSTLTAL
                     IEASRFDLYDEPMATVGDLEAYAKSRSSVLLALAAQILAGMGAEIAAGPAGMAYAIAG
                     LLRAFPLHAGRRQFYVPVELLDRHKVRQQDIFAEKSSAGVKAALSDLRALAREHLRAA
                     HPRIVALRRSVIPAFLPVALVRPSLDRLERSDPFAPREIPAWRRQWLIWRAARNPARI
                     AG"
     gene            complement(9470..10534)
                     /locus_tag="VNY79_01810"
     CDS             complement(9470..10534)
                     /locus_tag="VNY79_01810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HWX71214.1"
                     /translation="MEQNVRVEENDDLPELAGRWRSQVVLKRDVFSTIERGRFRTASG
                     EVEAVLRRLDDVPWWSRALARFLFRRERRALAVAGGLGIAPPLLFAGRDVLVRGWIDA
                     IPLHIAKPHGDTAYFRSAKAALRMLHRAGVAHNDLAKEQNWLYADSSAYMIDFQRASC
                     FGRRNARFRIARYEDLRHLLKHKRRYAPGALTAIEHRVLARKSLYARLWMATGKKIYY
                     AITRGLNVTDREGRGVRFTREAPAIAARLKAHPRVRDVAIVAFPDRRAGTGLYAFVEG
                     SAGDRELRDLLGGDTPEHLQVVEAFPRDAQGEIRSEILELVAMNQLDLIDPLVKTEAD
                     RALVGRIISERRNLRDRFAF"
     gene            complement(10709..11527)
                     /locus_tag="VNY79_01815"
     CDS             complement(10709..11527)
                     /locus_tag="VNY79_01815"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF014566.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0071586 - CAAX-box protein processing
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane glutamic
                     endopeptidase"
                     /protein_id="HWX71215.1"
                     /translation="MNVVVLVGVAAVGICALWVAQTVALIYVGERLALPLQYTTRSPV
                     VRMTSQVMIQAVWIIIVVGTPIALGINPLDALQRAFPLPVPWRRIATAFLIMSIPLCL
                     GYALYIKAQWLRFEPRHDAATRRRKLFSRFLTPVPLAVLEEAVFRGTLLEQLLRSLPA
                     TLFGSALAVILSSATFAAVHFIKPARGKPVLQGLYSYFTAGCLFGIGYIASGRSLWVP
                     VTMHATAIFIIEVMRLHTLHQAPRWLAGFPEGPHSGIVGSIVVVGMAIALVVLI"
     gene            complement(11524..12285)
                     /locus_tag="VNY79_01820"
     CDS             complement(11524..12285)
                     /locus_tag="VNY79_01820"
                     /inference="COORDINATES: protein motif:HMM:NF015251.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71216.1"
                     /translation="MALGDNVPPDAEIWYFRRLGWFLASALAVFHHGTKASAVFDEIK
                     FDQSIAVLDAAVAEGRGAVIISPHWCGHELVAAEVNRRHRMTLLVRQASSSERMARKL
                     RWYGALGVEIVLRPKHTSTVRDAVAYLNVLRRGGVLAITPDLLVEAPQGVETQVFGRQ
                     ASVHGGAFAIAIAAGAPMILPYFRWQPDSTLLVSCERAPEPPTGCERATANRLALENW
                     WTWFEQKLRSNPENWLFWLDKSWSRFLRRKSHALP"
     gene            12534..12875
                     /locus_tag="VNY79_01825"
     CDS             12534..12875
                     /locus_tag="VNY79_01825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014889547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HWX71217.1"
                     /translation="MFSILGANANADNRVGTRQRKPAAEPQAPPDGTKNFAEAREILS
                     TIRGICAVAALDIKTHEFGLEIAERYRFSIYDSLIVAAALQAGCSTLYSENLQHGQTI
                     DKLMIRSPFDR"
     gene            complement(12897..14267)
                     /gene="trmFO"
                     /locus_tag="VNY79_01830"
     CDS             complement(12897..14267)
                     /gene="trmFO"
                     /locus_tag="VNY79_01830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate--tRNA-(uracil(54)-
                     C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO"
                     /protein_id="HWX71218.1"
                     /translation="MPYNPINIIGGGLAGSEAAWQIARLGVPAVLHEMRPLRSTAVHK
                     TDLLAELVCSNSFRSDDADGSAIGLLHAEMRRLGSLVMRAADAHKLPAGGALAVDREG
                     FSAAVTGALEGDPLIDIRREEVLAPPAEWDNVIVATGPLTSPALTEAVRAHTGEDALA
                     FFDAIAPIVHRETIDFDIAWFQSRYDKAGPAGSGADYINCPLRRPQYEAFVDALLGGE
                     KMAFHEFEATPYFDGCLPIEVMAERGRETLRHGPMKPFGLTDPRRPQEKPYAVVQLRQ
                     DNKLGTLFNMVGFQTKLKHGEQVRIFRGIPALAKAEFARLGGLHRNTFLNSPQLLDAT
                     LRLKATPRLRFAGQITGCEGYVESAAIGLLAGRFAAAERRDQPPLLPPLTTAHGALLG
                     HITGGHIETIDAGPRSFQPMNVNFGLFPPLGGGVARGAKKRALCLRALADLEAWIGTA
                     VPRAAE"
     gene            complement(14310..>14822)
                     /locus_tag="VNY79_01835"
     CDS             complement(14310..>14822)
                     /locus_tag="VNY79_01835"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HWX71219.1"
                     /translation="RLLQAARRSPHLRRAILLGLYTGSRPGVILALRWDQIDFTNGIM
                     SRVPLGMNEDKKKRAPKVKLGRRILAHLRRWRELDGPHSKHVCHYNGTQVEDPHGTWK
                     RAVTGAGLELHGPNKVTRHTLRHTRATWMMQAGVPIWEAAGFLGMSTKTLERVYGHHA
                     PDHQERAANI"
BASE COUNT         2628 a         4852 c         4755 g         2587 t
ORIGIN      
        1 gcgcttattg cggtgatgga gacctatcag caggaggacg gctcgattgc agtgccggat
       61 gcgcttgcgc catacatggg cggcatcaag aagatcgaga agcaataggc catgcgcatc
      121 ctggtcacca acgacgacgg catccatgcc gacgggctcg acgtctgcga aaagatcgcg
      181 cgcgcccttt ccgacgacgt ctgggtgatc gcgccggaat acgaccagtc gggcgtcgct
      241 cattcgctgt cgctcaacga tccgctccgc ctgcgccagg tcgccgagcg gcgctttgcg
      301 gtgcgcggca cgccgaccga ttgcgtcatc atgggcgcgc gccacgttct caacggcaag
      361 ggacccgatc tcgtgctctc cggcgtcaac cgcgggcgca acgccggcga ggacgtgatc
      421 tattccggca ccgtggccgg cgcggtggaa ggcaccgtca tcggcgtccc ctcgttcgct
      481 ctgtcgcagg cctatgcatc gcgcagcggc cggccgccct actgggagac gagcctgcag
      541 catgcgcccg acatcatccg ccgcgtcgtg gccgagggca tcccgcgcga cgtgctcatc
      601 aacgtcaact ttcccgattg cgcacctgac gaggtcaagc gcattgcggt tgcgccgcag
      661 gggcggcgcc gccaggagcg gctgcacatc gacgaacgcc gcgacggccg cggcaatccg
      721 tactactgga tcacctatgc gcgcctgagc gccgtcaagg cggcgccgga cgggaccgat
      781 ctcgccgcgc tcgacgagca ttgcatcgcg gtgacgccgc tcaagctcga catgaccgac
      841 gagccgtaca tgacgaagct cgccgggcta ttcgagtgag tacgacccac cgatcgtcgc
      901 cgccggcgac gagcaaaacg accaagcaat ccggcactcg gggaaacgcc ggatagcgtc
      961 ggtcgtggcg cttcccggtg cacatgccgc gccaacgcgc acaaggtcgc gccaagtccg
     1021 caccgagtcc gcaccaggtc cgcggatcag tttctggcgc gggccgtgac cgttttgatt
     1081 gcctcggcca gcgcgtcggc ttggaacggc ttctgcagcg tcggggtctg ccggtacggt
     1141 tccgggacgc cgcgctggcc atagccggtc gcgaacacga acggcacgcc gcgctcgagt
     1201 aggacttcga ctactggcgt gactggctgg ccgttgaggt taacgtcgag aatggcgaca
     1261 tcgaattcgg cctgcttcgc aagggccagc gcctcctcga tccgtccggt ttccgctgca
     1321 atcgcgtggc cgagatcagt cagcatgtct tgcagtaaca tgcggatcat caactcatcc
     1381 tcgaccacga ggacgcgctt gctctcggcc gacttcccct caaacgtcat ggaggacccc
     1441 gtgcttgcgg cggctcttct gcccttcgcc tgcggcggaa gaggggcgcc ggaacttccg
     1501 cgattcgtct tggtgtatca attgccgacc ggggatcggc ggcgctccct gcgcgagagg
     1561 ttcaacgccg cgacacggca gttggttcct ccgataccct ggggtcttgc ccgtcgcgaa
     1621 cagccgaacc cgccgcaagc gcgggaccag tgccagaatc cgccgcaaag tggtaaaacc
     1681 ggccacaccc gaggcgaggt cgtcgtgggc ggactcgaag cagccgacgt ggaacgcatg
     1741 gagtttcagc tcgcgctgcg ccggcgcggg atcagcgacc aggcggtgct gcgcgccatg
     1801 gacgaggtgc cgcgcgaaca cttcgtggcg cccgagttca tcgaaagcgc ctacgccgac
     1861 cacgcgctgc cgatcgcgtg cgggcagacc atcagccagc cctacgtcgt cgcctacatg
     1921 accgagcagc ttcaagtcgg accgcagcat cgtgtccttg aagtcggcac cggctccggc
     1981 taccaggccg ccattctgtc gcggctcgcg cgcgaggtag tgagcgtcga gcgctatcgc
     2041 acgctggccg agaccgcgcg ccagcgcctc aggacgctcg gctacgccaa cgtcacgatc
     2101 atcgtcggcg acgggtttgc aggagcgccg gagcaagcgc cgttcgaccg tatcatcgtc
     2161 accgcggcag ccgagaacat accgcctgcg ctcgtcgagc agcttggcgc gaacggcaag
     2221 atcgtgctgc cgctcggtcc gcgcaatgga acgcagcaca ttgtcaagct gaacagaaca
     2281 gcgggcggcg ccctggaacg cgaaaatctc attgccgtga gatttgtgcc gctgctgccg
     2341 ggacaggccc gcgaattgta gctattcggt cacagtccac caaatactcg aacacctccg
     2401 gggtccttaa aggcctgttt accccaacga tgtttattcg ctcgaagcta aagttgcgtg
     2461 cgagcgagta accatgtacg cgtcgcgttg ttcggccctc ggcccacggg tagttgccat
     2521 tgcgttaatc gcattgggta ccgccagttg cagcagcgac tccggtcgcc tgtcggatat
     2581 cttcggttcc gataacaatt cctcccgcga agcgaccggc tcgatcccgc agggcgccaa
     2641 cggcggcgtc gagagccgac cgatgccgca tcttgccggc cccaacggcg aaggcacctc
     2701 gggtggcggc cgcggcatgg gctcatacca gccgggcaac gcggaaacta ccgggtcgct
     2761 cacatcggcg tcgccgccgc cgacctggac ctgggagggc ggcaaaccga tcgtcgtggc
     2821 gcggggcgag acgctggaga gcatctcgcg gcgccatggc gtgcctgtcg ccgccatcat
     2881 ggaggcgaac agcatcacca gcccggcgat ggtgcatccc ggcgagcatc tcgtgatccc
     2941 gcgtcgccaa gggccggcgg ccaccgcttc ggcaccgcag acccggatcg cgacgaacgc
     3001 gcatgcgatt ccctcgaccg tgccggtcgg tccgccgcgc aatgcgctgg cggcgggttc
     3061 cggcacccac gtcgtggcgc cgggcgagac cctccacagc atcgcgcggc tctacggcaa
     3121 gccggtgatg atgctcgcca aggcgaacaa catcccgccg aacaccatgg tgaaggtcgg
     3181 cgagcgcatc gtgattccgg gcgtccgggg gccggcaata gcggccgcgc cggccgccgc
     3241 ggtcgcaccg gctgcgcccc gcgcggaggc tcccgccgcc acctcggccc tgcccaagac
     3301 ccagaatgtc gctaccgcgg aagcgccgcg cagcgcgcgg gttgcgagcc ccgccgctgc
     3361 gccgcccgtc caggagactg cggtcaaggc tgcagagcct gcaggagcgg ttgcgggatt
     3421 ccgctggccg gtgcgcggcc gcgtcattgc cggcttcgga ccgaagtcca acggcctgca
     3481 gaacgacggc atcaatctcg ccgtgccgga aggaaccccg gtcaaggcct cggaagacgg
     3541 cgtcgtcgcc tatgccggca atgagctgaa gggttacggc aatctcgtgc tggttcgcca
     3601 cagcaacggc ttcgtcaccg cctatgcgca cgcgagcgag ctgatggtga agcgcgggga
     3661 aacggtcaag cgcggccagg tcattgccaa gtccgggcag accggcagtg tcaccgcgcc
     3721 gcaactgcac ttcgagatcc gcaaaggggc gaccccggtc gatccggcgc aatatctcaa
     3781 cggcgcctga tttcggataa cggacggcag agggataacg gacgccggag gacagacgac
     3841 gggccgcgac ggatgatcct atctgtcgtc cgtcgtcagg tctccgtcat ccgctcctgc
     3901 gtcatctgtt ctcaccccaa gccgacccgc gaggtcctgc acgtattgcc aggcgacgcg
     3961 gccggagcgg gcaccacgcg tcgtcgccca ttcgagcgct tcgccgcgca attcctcgcc
     4021 tttgatcggg acgcggtagc ggacgacata gccctcgacc atagccaggt attcgtcctg
     4081 gctgcagcga tggaagccga gccacaatcc gaagcggtct gaaagcgaga ccttctcctc
     4141 caccgcctcg cccggattga tcgcggtcga gcgttcgttc tcgatcatgt cgcgcgccat
     4201 catgtggcgg cggttggaag tggcgtagaa gatgacgttc tccggccgcc cctcgatgcc
     4261 gccttcgagc atcgtcttaa gcgacttgta cgaggtgtca tccgcgtcga aggagaggtc
     4321 gtcgcagaag acgatgaaac gctgcgatgc ggagcgcaaa agccccatta gctcgggcag
     4381 cgtctcgata tcttcgcggt gaatttcaac gagcttgagc ccggcgtccg ggtgcgcggc
     4441 gccgacggcg gcgtgagcgg ccttgaccag cgaggatttg cccatgcccc gcgcgcccca
     4501 cagcagggcg ttgttggcgg gcaggccgcg cgcaaatcgc tcagtgttct ccagcagaag
     4561 atcgcgcacg cgatcgatgc ccttgaggag cgacatctcg acacggttga tgcggcgcac
     4621 ggcggcgagc cgtcgccctt ccggatgcca gacaaaggcc gcggccgcgg agaaatcggg
     4681 cgcgggcggc ggtggcggag ccagacgttc gagcgcgtcg gcgatccgct cgaggacctc
     4741 gtcgactcca tcgcgcgccg ggcgcgcttt cggcgctccg gcgacggcgg cgctcgccgc
     4801 cttgttcctg aagctcgaag gggaatttga catcgctttc cgcaccgttc ctcctccccc
     4861 ttagcggggc gctaaaaccc tcgcaagcgc gccgcatccc tggcgcaaca ttgcaattgg
     4921 gccaacggcc gctatagtcc gcgccgattt cccgcgcaaa atcggccgtt tctcttctgg
     4981 ccggcgcgtc ccgtatgggc ccggaggagc aatgctgatc acgcccgcat tcgcgcaagg
     5041 cagcctgttc ggcggcgccg acagcagcgg catgatcacg tcactcctgc cgctgattct
     5101 catcgtcgtg atcatgtact tcctagtgct gcggccgcag cagcagcggg cgaagcagca
     5161 tcgggacatg gtcaaggcgc tgcgccgcgg agacagcgtg gtgaccaatg gcgggctcgt
     5221 cggcaaggtc accaaggtgg tcgacgatga ccagatcgag gtcgagatcg ccgacggcgt
     5281 gcgggtacga cagatgcgct cgatggtctc cgaagtgagg gccaagggcg agccagtgaa
     5341 ggacgacagc tagtcgccgc ctccgtcccc cggccgctgg cgcgggaggg aagggagggg
     5401 aagcgaggac gaccgaatcc atgttgtttt tcacgcggtg gaaggcggcg ggtatcctgc
     5461 tcacggcgct cgtcgtgtgc ctgttcgcag tgccgaactt ctttcctgaa aacgtgatcc
     5521 gcaagtggcc ggcctgggcg caacgccaca tcgtgctcgg tcttgacctg cagggtggat
     5581 cgagcctgct cctcgaggtc gacaccaatg cggtgcgcaa ggaccggctg ctgagcctca
     5641 acgacgacgt gctgcgcatt ctgcgtcagt cgcggattct cttcaccggc cgggcgatcc
     5701 acggcaacag cgtcgaggtg cgcatcacgc gcgaaagcga cattccgctt gcactcgaga
     5761 agctgcgcga actttcgcag ccgctgtccg gcattctcgg cggctccgga cagcgcagcg
     5821 tccaggttac tgagagcggc ggcctgatca cgcttacgcc tccggacgtg gcggtcatcg
     5881 aacgcattcg ccaaacggtc gaccagtcga tccagatcat cgagcggcgc gtgaaccagc
     5941 tcggcctggt cgaacccacg atccagcgcc aggggaccga ccgcattctc gtccaggtcc
     6001 cgggcctgcc agacccgtcg cggctcaagg agctcatcgg caagacggcg aagctcgatt
     6061 tccgcatgct cgacctgtcg gagacggcgg agcaggcgat ggccggccag gtgccggcgg
     6121 actccgagat cctcgaaggc gagaaagggc aggggaaata tctcgtcgag aagcgcattc
     6181 tcgtctccgg cggcgatttg atcgacgcgc agccgggctt cgaccagcgc aacggcgagc
     6241 cgatcgtcag cttccgcttc aattcgatcg gcgcgcggaa attcgccgaa gcgacgcagc
     6301 agaacgtggg caagccgttc gccatcatcc tcgacggcaa ggtgatctcg gcgccggtga
     6361 tccgcgaacc gatcctgggc ggcaccgggc agatttccgg caatttcacc gtcgagcagg
     6421 ccaacgatct cgccatcctg ctgcgcgccg gtgccctgcc ggtggcgctc accgtggtcg
     6481 aggagcgcac cgtcggcccc ggcctcggcc aggattcgat caacgccggc gagcacgccg
     6541 cctatctcgg cgcggcgctc gtgatcctct tcatgttggt gacttacggc ctgttcgggc
     6601 tgttcgccaa cctcgcggtc gccgtcaatg tcgcgatgat ctttggcgtc ctgtcgatgc
     6661 tcagtgcgac gctgagcttg cccggcatcg ccggcatcgt gctcaccgtc ggtatcgcgg
     6721 tggattcgaa cgtgctcatt tacgagcgca tccgtgagga ggtgcgcgct ggccgcactg
     6781 ccatcaacgc gatcgacgcc ggcttctccc gtgcgctcgc caccatcctc gactccaaca
     6841 tcacgacctt cattgccgcc gcggtcttgt tctatatcgg caccgggccg gtacgcggct
     6901 ttgccgtgac gctcggcatc ggtatcctca ccagcctgtt caccgccttc accctgaccc
     6961 ggttgatcgt ggcctactgg gtgcgcatgt ggcggccgcg cacggtgccg atctagcacc
     7021 tgcctgccac ggctctcccg gaagccggcg agcgcaagga aagccgaaat cggccttcgg
     7081 aagaagtcaa tgctcgaact gaaaaagctc acctgaaaga aacacagtgc gcctgcttcg
     7141 catcgtcccc gacgacactc gtttcgactt catgcgcttc cggcgcatca gcttccctat
     7201 ctcggcggcg ctgtcgatcg cggcgatcct gttgtacttc tttcacgggc tcaatttcgg
     7261 catcgatttc gtcggcggca ccctgatgga ggtccagacg aaaaacggac cggccgatct
     7321 cgcatccatg cgggcgacga tcggcgcgct caatctaggc gaggtccagc tccagcaatt
     7381 cggcgcgccg aacgacgtgc tcatccgcct atcggaacag cccggcggcg acgcggcgca
     7441 gcaggtcgcg gtgcagaagg tccgcgaggc gctcggcggc accgtcgaat accgccgggt
     7501 cgaggtggtc gggccgagcg tctccaccga gcttctctcc tacggcacca tcggcctggt
     7561 gctcgcgatc ggcgccatcc tgatctatct ctggttccgc ttcgaatggc agttcgcgct
     7621 cggcgccatg atcgccaatg tccacgacct ggtgctcacc gtcggcttca tgtcgctgac
     7681 gcggatcgac ttcgacctca ccagcatcgc ggcgctgctg acgatcctcg gctattcgct
     7741 caacgacacc gtggtgatct acgaccgcat ccgcgaactg ctgcgccgct acaagcgcat
     7801 gccgatgccg gacctgctca atgcctcgat caacgccacg ctgtcgcgct cgatcgtcac
     7861 ccacctcacg gtatcgctgt cgctcctggc cctgatcctg ttcggcggcc aggcgatccg
     7921 cagcttcacg gcgacgatga tgttcggcgt tgtgctggtc ggcacctaca cgtcggtgtt
     7981 catcgcctcg ccgatcctga tctatctcgg cgtcggccgc acgcggcagg gcgaacccga
     8041 ggatgccgag accgcgactc cgacgccgcc gtcaacagtg ccggaaccgt cgccgaaagg
     8101 gtccgtgccg cggcaacgcg cgagggcgcg ccgctagtgg acgcaccgca tctgccgcgg
     8161 caggcgctga tcgacgccca tggtggaggc gggtttcgct tcgccggcct gtcgcatcgc
     8221 ggctcgctcc tctgcctgcc ggacggcatc tgggcatggc cggtcaccga gcccgcgcag
     8281 gcatccgagg agacgctcgc ccgcgtgttc gcccagaccg gcgaactgga cttcttcgtt
     8341 ttcggtacgg gtgccgcacc gtggatgatg ccggagcctc tgcgcgcgcg cttccgggcg
     8401 gcgcaggttt cgctcgacac gatgaccacc ggagcggcgg tacgtaccta caacgtgatg
     8461 ctgatggaga accgccgcgt aggcgccggc ctgatcgcca tcgcttgatg ctgctaggat
     8521 caggtcgatg caggacgcgt tcgcctattg tgcggagctt gtacggacgg cggaccgcga
     8581 ccgctttctc gcttcgctgt tcgcgcccgc tgatcggcgc gatgcgctcc acgcacttta
     8641 cgccttcaac atcgaagtca cccgcgtgcg cgaagtggcg cgcgagccgc tccccggcga
     8701 gatccgcctg cagtggtgga gcgacgtgct caacggcgaa cgcgaggggg aggcgcaggc
     8761 caatccggtc gcggccgcgc tcctggcaac ggtcacgcgc catcggctcg tcgtcagcac
     8821 gctgacggcc cttatcgaag cctcccgctt cgatctctac gacgagccga tggcgactgt
     8881 cggtgacctc gaagcgtacg ccaagagccg atcgtcggtg ttgttagctt tggcggcaca
     8941 aatccttgcc ggaatgggag ctgagatcgc ggccggcccc gccggcatgg cgtacgccat
     9001 cgccggcctt ttgcgtgcct ttcctcttca cgccgggcgg cgccagttct acgtgccggt
     9061 cgagctcctc gatcggcata aggtccgcca gcaagacata tttgcggaaa agtcctcggc
     9121 cggcgtcaaa gcggcgcttt ccgatctgcg cgcgctcgcg cgcgagcatc tgcgcgcggc
     9181 tcacccgcgg atcgtggcgc tgcggcgttc cgtgatcccc gcttttcttc cggttgcact
     9241 ggtgcggcct tcgctcgatc gcctggagcg cagcgatccg tttgcgccgc gcgaaatccc
     9301 ggcttggcgg cggcaatggc tcatctggcg cgcggcgcgc aatccggcgc ggatcgccgg
     9361 gtgatcgccg ttagagcttg atccggaaaa gtggaagccg gttttccgac aagatcatgc
     9421 tccaacaaaa aaccggagcg caatggtttc aacttgaaac gatcccgttc tagaacgcga
     9481 aacggtcgcg gaggttgcgc cgctccgaga tgatgcggcc gacgagggcg cgatcggcct
     9541 cggtcttgac cagcgggtcg atgaggtcga gttgattcat ggccacgagc tcgaggattt
     9601 cgctgcggat ctcgccctgc gcatcgcgcg gaaaggcctc gaccacctgg agatgctccg
     9661 gcgtgtcgcc gccgagtaag tcgcgcagct cgcgatcgcc ggccgagccc tcgacgaagg
     9721 cgtagaggcc ggtgccggcg cggcggtcgg gaaaggcgac gatggcgacg tcgcgcaccc
     9781 gcggatgcgc cttgaggcgc gctgcgattg ccggcgcctc gcgggtgaac cggacgccgc
     9841 ggccctcccg gtcggtgaca ttgaggccgc gggtgatcgc ataatagatc ttctttcccg
     9901 ttgccatcca cagccgcgca tagagactct tgcgcgcgag cacgcggtgc tcgatggcag
     9961 tcagcgcgcc gggagcgtac cgacgtttgt gcttgagcag atggcgcaga tcctcgtagc
    10021 gggcaatgcg gaaccgggcg ttgcggcgac cgaaacagga cgcgcgctgg aaatcgatca
    10081 tgtacgcgga gctgtcggca tagagccaat tctgctcctt ggcgagatcg ttgtgagcaa
    10141 cgccggcacg gtgcagcatg cgcaaagccg ctttcgccga gcggaaatag gcagtatcgc
    10201 cgtgcggctt ggcgatatgc agggggatgg catctatcca gccgcgcact aaaacgtcgc
    10261 gtccggcgaa aaggagcggc ggcgcgattc cgagcccgcc cgcgaccgcc agcgcccgac
    10321 gctcgcgccg gaacagaaag cgagcgaggg cgcggctcca ccacggcacg tcgtcgagtc
    10381 ggcgcagcac cgcctcgacc tcgcctgagg cggtgcggaa gcggccgcgc tcgatggtgg
    10441 aaaaaacgtc gcgcttgagc acgacttggc ttcgccaccg tccggcgagc tcgggcagat
    10501 cgtcgttttc ttcgacacga acgttttgct ccatctagct tgctctccca tcttttggcc
    10561 gtcttctcca gcaggttatt gtgtctggcg ccggctagtt gcgcgacttg ctcgcagcag
    10621 aaatcctttc atagaccttt ttgcaaccac gggctcgtct cgccaattcg gcagggccgg
    10681 tgagctcaat tggaaacccc ttgcgggctc agatcagcac gaccaatgct atcgccatgc
    10741 caaccacgac tatgctgcct acgattccgc tgtgtggacc ctctggaaat cctgcaagcc
    10801 agcgcggcgc ttgatgtagg gtatggagcc gcatcacctc aattatgaat attgcagtcg
    10861 catgcattgt aaccggtacc cacagagaac ggccgctggc gatgtagcca attccaaata
    10921 ggcacccggc ggtgaagtaa ctataaagcc cctgaagcac cggtttgccg cgggccggct
    10981 tgatgaagtg cacggccgcg aacgtggcgg agctcaaaat cactgctagc gccgagccaa
    11041 acagcgttgc tggcaatgat cgaagtagct gctcgagtag cgtgccgcga aatacggctt
    11101 cctcaagcac agccaaaggc accggcgtca aaaaccgcga aaacagcttc cttcgccggg
    11161 tcgcggcgtc gtgcctcggc tcgaagcgca gccattgcgc cttgatgtaa agagcatagc
    11221 caaggcacaa cggaatggac atgatgagga aggcagtcgc aatccggcgc caaggaaccg
    11281 gtagtggaaa ggctcgttgc agcgcatcga gcggatttat cccgagcgcg atcggcgttc
    11341 cgacgacaat gatgatccaa acagcctgaa tcatgacctg gctggtcatg cgaacgacgg
    11401 gcgagcgcgt ggtgtattgc aaaggcaaag ccaaacgttc gccgacataa atgagcgcga
    11461 cggtctgagc tacccagagg gcgcaaatgc ctacggcggc gacgccgact aacaccacaa
    11521 cgttcatggc agcgcgtgag actttcgccg caagaagcgc gaccagcttt tatcaagcca
    11581 aaatagccaa ttctccggat tgcttcgcaa cttctgctca aaccaggtcc accagttctc
    11641 caaggcaaga cgattggccg tcgcacgttc acagcccgtt ggcggctcag gagcccgttc
    11701 gcatgacacc agtaaggttg agtcgggctg ccatctgaaa tagggaagga tcatcggggc
    11761 tccagcggca atcgcaattg cgaacgcgcc accatgaacg cttgcttggc gcccgaagac
    11821 ttgcgtttcg accccctgcg gagcttccac caaaaggtca ggggtgatag cgagcacccc
    11881 gccccgtctg agcacgttca gataggcgac ggcgtccctg accgttgagg tatgcttggg
    11941 ccgcagcacg atttccaccc ctagagcccc ataccacctg agctttcgcg ccattcgctc
    12001 ggagctcgat gcttgccgca ccagtaatgt catccggtgt cttcgattga cttccgcggc
    12061 aacgagctca tgaccgcacc agtggggcga tatgatcaca gcgccgcgtc cttccgcgac
    12121 agcagcgtca agtaccgcaa tcgattggtc gaacttgatt tcgtcgaaca cagccgacgc
    12181 tttcgttccg tggtgaaaaa ccgccagcgc acttgctaaa aaccagccta gtcgacggaa
    12241 gtaccatatt tccgcatccg gcggcacgtt atcgcctaac gccatggcat gctcgttcga
    12301 actcttcgac gcagcatcgg agtttccccg agaagcctag tcagggagcg aatagtccga
    12361 cgctgatggt caattgaaac ccgtgccgta gccgcaatgg ccgaccgaat tgcccgttgc
    12421 gtgagatcac gacggagttg cgacaaagaa aagtccatct cttgtcccgc ggtgcggaag
    12481 tatatgtgta gcctcagagt taaaagcgga ctgttacgca ggtcgtttgc caagtgtttt
    12541 cgatcttagg cgcgaatgcg aacgccgaca atcgcgttgg cacgcggcag cgcaaacctg
    12601 ctgcggaacc tcaagctccc ccggatggga cgaaaaattt tgctgaggcc agggagatcc
    12661 tatcgacgat ccgcgggatc tgcgcagttg ccgcgcttga tatcaagacg cacgaattcg
    12721 gcttggaaat agccgaacgc taccgcttct cgatctacga tagtctcatt gtggccgcgg
    12781 cactgcaggc gggttgttcg acactgtact cggagaacct gcagcacggc cagacgatcg
    12841 acaagttgat gatccgcagc ccgtttgatc gctgagacga ttgcaagcgc tgccgctcac
    12901 tcggctgccc gcggcacggc ggtgccgatc cacgcctcga ggtcggcgag cgcgcgaagg
    12961 cagagcgcgc gtttcttggc gccgcgcgcc acgccaccgc cgagcggcgg gaacaggccg
    13021 aaattgacgt tcatcggttg aaacgagcga gggcccgcat cgatcgtctc gatatggccg
    13081 ccggtgatat ggccgagcaa cgcgccgtgg gcggtggtta gcggcggcaa gagcgggggc
    13141 tggtcgcgcc gttccgcggc ggcaaagcgg ccggcgagca gcccgatcgc ggccgattcc
    13201 acgtagccct cgcacccggt gatctgtccc gcgaagcgca gccgcggcgt cgccttgagc
    13261 cgcagcgtgg catcgagaag ttggggcgaa ttaaggaagg tgttgcgatg caggccgccg
    13321 agccgggcga actcggcctt ggcgagcgcc ggaatgccgc ggaagatgcg cacctgctcg
    13381 ccgtgcttca gcttggtctg gaatccgacc atgttgaaca gcgtgccgag cttgttgtcc
    13441 tggcgcaatt gcacgaccgc gtagggcttt tcttgcggcc ggcgcggatc ggtgaggccg
    13501 aaaggcttca tcggcccatg gcgcagcgtt tcccgcccgc gttcggccat cacctcgatc
    13561 ggcaggcagc cgtcgaaata cggcgtggct tcgaactcgt ggaatgccat cttctcgccg
    13621 cccagcagcg cgtcgacgaa ggcctcgtac tgcggacgcc tcagcgggca gttgatgtag
    13681 tcggcgccgg atcccgccgg cccggccttg tcgtagcgtg actggaacca ggcgatatcg
    13741 aagtcgatgg tctcgcgatg cacgatcggc gcgatagcgt cgaagaaagc gagtgcgtct
    13801 tcgccggtgt gggcgcggac tgcctcggtc agcgccggcg aggtgagggg accggtggcg
    13861 acgatgacat tgtcccactc ggctggcggc gccaaaacct cttcgcgcct gatgtcgatc
    13921 agcggatcgc cttcgagcgc cccagtgacg gcggcggaaa atccctcgcg atcgacggcg
    13981 agcgccccgc cggccggcag cttgtgggcg tcggctgcgc gcatcaccag cgagccgagc
    14041 cggcgcatct ccgcatgcaa gaggccgatg gcgctcccgt ccgcatcgtc agatcggaat
    14101 gagttcgagc acaccagttc ggcgagcaga tcggtcttgt gcacggcggt cgagcgcagc
    14161 ggccgcatct cgtgcaggac cgccggcacg ccgaggcgcg cgatctgcca tgcggcctcg
    14221 gagccggcga ggccgccgcc gatgatattg attggattgt aaggcaaagc gcgctctcgg
    14281 gtacagttat ggtacagaat agatgacccc tatatgttcg cggctcgttc ctggtgatcc
    14341 ggcgcgtggt ggccatagac gcgctccagg gtcttggtgc tcatacccag gaatcctgct
    14401 gcctcccaga tcggcacgcc cgcttgcatc atccaggtcg cccgcgtgtg tcgcagagta
    14461 tgacgagtga ccttgtttgg cccgtggagt tcgagaccgg cgcccgtgac tgcccgcttc
    14521 caagttccat gcgggtcctc gacctgggtg ccattgtagt ggcagacgtg cttggaatga
    14581 ggtccgtcga gttcccgcca gcggcgtaga tgcgccagaa tgcggcggcc gagtttgacc
    14641 ttcggagcgc gcttcttctt gtcttcgttc atccccagcg gcactcgcga catgatcccg
    14701 ttggtgaagt cgatctgatc ccatcggagt gccaggatca cacctggccg cgatccggta
    14761 tagaggccga gcaggatggc gcggcgcaga tgcggtgatc gccgcgccgc ctgtagtaac
    14821 cg
//
LOCUS       DATMQB010000051         3602 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_942033, whole genome shotgun sequence.
ACCESSION   DATMQB010000051 DATMQB010000000
VERSION     DATMQB010000051.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3602)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3602)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3602
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_942033"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            182..2674
                     /locus_tag="VNY79_01840"
     CDS             182..2674
                     /locus_tag="VNY79_01840"
                     /inference="COORDINATES: protein motif:HMM:TIGR03607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like protein"
                     /protein_id="HWX71220.1"
                     /translation="MKEKELRFALVCFGGVSLAIYMHGINKEILKLVRASRALHGIAD
                     QAKRASASFDSLVDRNDPEYDTEAVYFDLLREAGRKIDLRVVVDIIAGASAGGINGTM
                     LARAICHDLPTAPLRDLWLNNADVSRLLSPEARARGWSKWFLRPVLWAIGTRRSPLVR
                     DAEVRANLSMFVRSRWFKPPLDGMRMAALMYEAATAMGSPKSAEASLLPSGRGLDLFV
                     TVTDYYGYLQPVPIHDPAIIEERVHRHLFHFKYRRRPNGEVESDFDLANAPALAFAAR
                     ATSSVPGAFPPARVAEMDELLRSKGATWPRRADFIKRNFANYLESGVDPTSVPFIDGS
                     VLNNRPFREAIRAIPGRPAYREVDRRIVYIDPDPRPPGARAHDRVPGFFSTLKGALSD
                     IPRTEPVTDELSWVAAFNERARRLKAIIERARPQVSRLVANVMTGAQDISEAQIREWR
                     EHANVKAAEEGGFAYEGYVGLKLASARAFVAQLIMTTRGVKAGSPFARTIAEVIDTWA
                     ARAEASDRLAKSGSFRSGAAQDLLAAPRWVTMLLDFDLDYRRRRLHFMIEGQNRLYEM
                     LDTERFKDIGAERVDRLKRRFYDCLDDLQQRENLAQFDEEIRALVTEIFSAPPSADEV
                     RDITGYAQSVAARFASRIDSLVNRLAMTIDLDASTREIDGLLAETFGEGWPHEAREEV
                     LINYLGFPFWDLLTFPVMTWREVGEFNELLVDRISVHDARALKTIECAQKLKGIFFEH
                     TAAFLSRAYRENDYLLGRLHALDRLLDIVCDSAGRDLLTESELLALKKRGFMQILDAE
                     APHLPNSGELIAELRAGVAALTADADTAPDPR"
     gene            2845..3342
                     /gene="coaD"
                     /locus_tag="VNY79_01845"
     CDS             2845..3342
                     /gene="coaD"
                     /locus_tag="VNY79_01845"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007590732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004595 - pantetheine-phosphate
                     adenylyltransferase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HWX71221.1"
                     /translation="MLRTALFAGSFDPMTNGHLEVVRSAVAMVDRLVLAVGIHPGKVP
                     LFAAEERVAMLEEVCTPLARAAGCEIAVSTFADLVVAAARRAGATILIRGVRDASDFD
                     YEMQMAGMNAVMAPEVQTVFVPASPAVRPITATLVRQIAGMGGDVSAFVPAQVAARLQ
                     RKFAK"
     gene            3363..>3602
                     /locus_tag="VNY79_01850"
     CDS             3363..>3602
                     /locus_tag="VNY79_01850"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007610642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003755 - peptidyl-prolyl cis-trans
                     isomerase activity [Evidence IEA];
                     GO_process: GO:0000413 - protein peptidyl-prolyl
                     isomerization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HWX71222.1"
                     /translation="MTRILAVLFAIMCAAPVIAETLPPGLDPQNTIFLDTKYGRVIIK
                     LRTDVAPQHAERLKLLAREHFYDNVPFHRVIDGFMA"
BASE COUNT          603 a         1197 c         1165 g          637 t
ORIGIN      
        1 tacttcgttt ggtcgccgac caaaaatcgc cagatgcgcc cttcctggtg cgacatcgcg
       61 tgtgcagccg aatagtccga aaggaggcat cttcgtaacg gattccaaag gcttcggcaa
      121 cggcgctaaa ataccttgcg atgatgctgc ccggcgtgac ggcggggcca ggggttgagc
      181 ggtgaaggaa aaggaacttc ggtttgccct ggtatgtttc ggcggcgtct cgctcgccat
      241 ctacatgcat ggcatcaaca aggaaatcct caagctcgtc cgcgcctcgc gcgcgctgca
      301 cggcatcgcc gaccaggcaa agcgcgcgag tgcctccttc gactcgctgg tcgaccgcaa
      361 cgatccggag tacgacaccg aagcggtcta tttcgatctg ctgcgcgaag ccgggcgcaa
      421 gatcgatctg cgggtcgtcg tcgacatcat cgccggagcc tcggcgggcg gcatcaacgg
      481 tacgatgctc gcgcgcgcga tctgtcacga tctgccgacc gcgcccttgc gcgatctctg
      541 gctcaacaat gccgatgtga gccgcctcct ttcgccggag gcaagggcgc ggggctggag
      601 caagtggttc cttcgcccgg tgttatgggc catcggcaca cggcgctcgc cgctcgtgcg
      661 cgatgccgag gtgcgtgcca acctctcgat gttcgtgcgc tcgcgctggt tcaagccgcc
      721 gctcgacggc atgcgcatgg ccgcgctgat gtacgaggcc gcgaccgcga tgggtagtcc
      781 gaagagcgcg gaagcttcac tgctgccgtc gggacggggc ctcgacctgt tcgtcaccgt
      841 caccgactac tacggctacc tgcaaccagt gcccatccac gatccggcga tcatcgagga
      901 gcgcgtgcac cggcatctgt ttcatttcaa ataccggcgc cgccccaacg gcgaggtcga
      961 gagcgatttc gacctcgcca acgcgccggc tctcgccttc gctgcgcgtg ccacctcctc
     1021 ggtgccgggg gcgttcccgc cggcgcgggt cgcggaaatg gacgaactcc tgcgcagcaa
     1081 gggcgcgaca tggccgcgcc gcgctgactt catcaagcgc aatttcgcca actatctgga
     1141 aagcggcgtc gacccgacgt cggtgccttt catcgatggc agcgtgctca acaatcgccc
     1201 gttccgcgag gcgatcaggg ccatacccgg ccgcccggcc taccgcgagg tggaccggcg
     1261 tatcgtctac atcgaccccg atccgcggcc gccgggagcg cgggcgcacg atcgggtgcc
     1321 gggcttcttc tcgacgctca aaggcgcgtt gtccgacatc ccgcgtaccg agccggtgac
     1381 cgatgagctg agttgggtcg ccgcgttcaa cgagcgcgcg cgccggctca aggcgatcat
     1441 cgagcgggcg cggccgcagg tcagccgcct ggtggcgaat gtgatgaccg gcgcgcagga
     1501 catcagcgag gcccagatcc gcgaatggcg cgagcacgcc aatgtcaagg cggcggagga
     1561 gggcggcttt gcctatgaag gctatgtcgg cctcaagctc gcttcggccc gcgccttcgt
     1621 cgcgcagttg atcatgacca cccgcggcgt gaaggcgggc tcgccgttcg cgcgcacgat
     1681 cgccgaggtg atcgatacct gggcggcgcg ggccgaggcg tccgaccgcc tggcgaaatc
     1741 gggctcgttc cgcagcggtg cggcacagga cctgctcgcg gccccgcggt gggtgaccat
     1801 gctgctcgac ttcgacctcg actaccgcag gcgccgcctg catttcatga tcgagggaca
     1861 gaaccggctg tacgagatgc tggataccga acgcttcaag gacatcggcg ccgaacgcgt
     1921 cgatcggctc aagcgccggt tctacgactg tctcgacgac ttgcaacagc gcgagaacct
     1981 cgcgcaattc gatgaggaaa ttcgcgcgct ggtcacggaa atattttcag cgccgccgtc
     2041 agccgacgaa gtcagggaca tcaccggcta cgcgcagtcg gtcgccgctc gcttcgcatc
     2101 gcgtatcgac agcctggtga accggctggc gatgaccatc gatctcgatg ccagcacccg
     2161 cgaaatcgac gggctgctcg ccgaaacctt cggcgagggt tggccgcacg aggcgagaga
     2221 ggaagtgctg atcaattatc tcggctttcc gttctgggac ttgctgacct ttccagtgat
     2281 gacgtggcgc gaggtcggcg aattcaacga gttgctggtc gatcgcatca gcgtccacga
     2341 tgcgcgcgcg ctcaagacga tcgagtgcgc gcaaaagctc aaaggcattt tcttcgagca
     2401 cactgcagcg tttctctccc gtgcctaccg cgagaacgat tatctcctgg gccggctgca
     2461 cgcgctcgac cggctcctcg acatcgtctg cgattcggca ggccgggact tgctgacgga
     2521 gtctgagctg ctggcgctca agaagcgcgg cttcatgcag atcctcgacg cggaggcgcc
     2581 gcatctgccg aacagcggcg aactgattgc cgagctgcgc gccggcgtcg cggcgttgac
     2641 ggctgatgct gataccgccc cggacccgcg ttagcgcgtc gccgcgacct tccggcgcct
     2701 gtccgaacag gttgcgggta tcgcgcaggc agggagcctc ttcgtttgcc gcgaacccgc
     2761 aaaaatcggg cataatccgg cgctgccgac ccgttttcgc cgatctgggt tgcgatcgcc
     2821 ggaccctcgg gctagacccc cgccatgctg cgcaccgcgc tttttgccgg gtcgttcgac
     2881 cccatgacca acggtcatct cgaggtggtg cgcagcgccg tggccatggt cgaccgcctc
     2941 gtgctcgccg tcggcattca tcccggcaag gtgccgctgt tcgcggccga ggagcgggtc
     3001 gccatgcttg aggaggtgtg cacgccgctt gcgcgcgccg ccggctgcga gatagcggtc
     3061 tcgacctttg ccgatctcgt agtcgccgcg gcgcggcggg cgggcgcgac aatcctgatc
     3121 cgcggcgtgc gcgatgccag cgacttcgac tacgagatgc agatggccgg catgaacgcg
     3181 gtgatggcgc ccgaggtgca gaccgtgttc gtgcccgcct cgccggcagt ccgcccgatc
     3241 actgccacct tggtgcgcca gattgccggc atgggcggcg acgtttcagc cttcgtgccg
     3301 gcgcaggtcg ccgcgcggct gcagcggaaa ttcgcgaaat aaaggcctca cccggaggtg
     3361 acatgacccg tatccttgcc gtactgttcg ccatcatgtg tgccgcaccc gtcatcgccg
     3421 aaactctgcc gcccggacta gatccgcaga acacgatctt tctcgacacc aaatacggcc
     3481 gggtgatcat caagctgcgc actgacgtgg cgccgcagca cgccgagcgc ttgaagctgc
     3541 tcgcgcgcga gcacttttac gacaacgtgc cgttccaccg cgtgatcgac ggcttcatgg
     3601 cg
//
LOCUS       DATMQB010000052         3984 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1873234, whole genome shotgun sequence.
ACCESSION   DATMQB010000052 DATMQB010000000
VERSION     DATMQB010000052.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3984)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3984)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3984
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1873234"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2333
                     /locus_tag="VNY79_01855"
     CDS             <1..2333
                     /locus_tag="VNY79_01855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HWX71223.1"
                     /translation="VDEGFDAILVTDGDGRVLYANAAYLDLVGAADANDLRPVERVFI
                     GDADASEAIYRLLKAAREGQRLQEEVRVAGIRGRPARWLRLRVRPVGEGKRASRLTVW
                     SLSDVTRERERQENVFQELQHAIDYLDHAPAGFFSVDASGDVVYLNATLANWLDQDLA
                     QVGSGGLKLADLVAGDGAALLTTLRAPPGELKTEVLDLDLKTRSGRTLPVRLFHKLAF
                     GADGTPGASRTLVLNRARDDGTDPQRAAEIRFMRFFHHTPMAIATVDREGGIARTNPL
                     FARLFHNLLRRAHGEGAGRSISAIVAERDRPALDTAIAEAAQGKGDITPVDAALAGAG
                     VAAAGGERFARFYVTAVEEEERDQEAAIVYVLETTEQRELETKVTQTQKMELVGQLAG
                     GIAHDFNNVLSAIILAADFLLNAHKPTDPSFQDIMQIKQNANRAASLVRHLLAFSRKQ
                     TMRPQVLDVGEVLSDLTMLLRRLIGEKVALDVVHGRDLWPVKVDISQFEQVVVNLAVN
                     ARDAMPDGGRLTLRTANVTGKECERYHAKGMPAADYVLVEVVDTGTGIPAAIVDKIFE
                     PFFSTKEVGKGTGLGLSTVYGIIKQTGGFVYVDSAEHKGSTFRIFLPRHVAGAQEAAA
                     ERAAEAAAAAPLETVAAAEESRRAANADLTGRGTILLVEDEDGLRALNARGLASRGYT
                     VLEAGNGVEAIDVLEKADGQVDLVVSDVVMPEMDGPTLLRELRNRNPSLKIIFVSGYA
                     EDAFQKHLPEHGQFAFLPKPFTLKQLVAAVKDTLAA"
     gene            complement(2359..2526)
                     /locus_tag="VNY79_01860"
     CDS             complement(2359..2526)
                     /locus_tag="VNY79_01860"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71224.1"
                     /translation="MPRIVASAGTWLARLLAVAGVGLMLGACTKCDVPTWPPASAAAV
                     PLSCHSDAPAR"
     gene            2739..3143
                     /locus_tag="VNY79_01865"
     CDS             2739..3143
                     /locus_tag="VNY79_01865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007590914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HWX71225.1"
                     /translation="MDIRANGSAPSRRAPADWFTGTVWQEPVIESPAPGNVRATYVHF
                     EPGGRTNWHTHPAGQTLYILHGTGRVQSWGGKVREVRPGDVVWFPPGEKHWHGAGPAT
                     MMTHLAITEVLNGKFVEWLEPVTDEQHKASAG"
     gene            3146..3862
                     /locus_tag="VNY79_01870"
     CDS             3146..3862
                     /locus_tag="VNY79_01870"
                     /EC_number="2.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043295 - glutathione binding [Evidence
                     IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HWX71226.1"
                     /translation="MRYELYYWPTIQGRGEFIRLALEEAGADYVDVARRKGKSGVPAM
                     MKLLDGKGAARPPFAPPLLKAGKLVVAQTANILFYLGPHLKLAPRDEAGRLWAHQLQL
                     TISDLVVEIHDTHHPVSGWLYFEEQRPAARRRSQDFWRYRVPKFLGYFERVLQKNGGQ
                     YLIGRRLSYIDLSLFQVVEGLRYAFPKHMKRFEKKVPGLIALYDGVANRPRIKAYLAS
                     KRRIPFSQWGIYRYFTELDG"
BASE COUNT          666 a         1363 c         1332 g          623 t
ORIGIN      
        1 tcgttgatga gggcttcgac gccatactgg tcacggacgg ggacggccgc gtgctctacg
       61 ccaatgccgc gtacctcgac ctcgtcggcg cggccgacgc caacgacctt cggccggtgg
      121 aacgcgtgtt catcggcgat gcagacgcgt ccgaggcgat ctaccggctg ctcaaggccg
      181 cgcgcgaagg ccagcgcctg caggaggagg tgcgcgtcgc cggcatcagg ggccgccccg
      241 cgcgctggct gcggctgcgc gtgcggccgg tcggcgaagg caagcgcgcg agccggctca
      301 ccgtgtggtc gctcagcgac gtgacccgcg agcgcgagcg gcaggagaac gtctttcagg
      361 agttgcagca cgcgatcgac tacctcgatc atgctccggc cggcttcttt tccgtcgatg
      421 cgagcggcga cgtcgtttat ctcaacgcga cgctcgccaa ttggctggat caggatctgg
      481 cccaggtcgg ctccggcggc ctcaagcttg ccgatctcgt cgccggcgac ggcgcggcgc
      541 tgctgacgac gctgcgcgct ccccccggcg agctcaagac cgaggtgctc gaccttgacc
      601 tcaagactcg cagcggccgc acgctgccgg tgcggctctt ccacaagctt gctttcggcg
      661 ccgacggcac gcccggcgcc tcgcgcaccc ttgtgctcaa ccgcgcgcgc gatgacggca
      721 cagatccgca gcgcgcggcg gaaatccgtt tcatgcgttt cttccatcac accccgatgg
      781 cgatcgcgac ggtcgaccgg gaaggcggca tcgcgcggac gaatccgctg ttcgcccggc
      841 tattccacaa tctgctgcgc cgcgcgcacg gggagggggc cggccgctcg atcagcgcaa
      901 tcgtcgccga gcgcgaccgg cccgcgctcg acaccgcgat cgcggaggcc gcacagggga
      961 agggcgacat caccccggtc gatgcggcgc tggccggggc aggggtggcg gccgctggcg
     1021 gcgagcgctt cgcccgcttc tacgttactg cggtcgagga agaagagcgc gatcaggaag
     1081 cggcgatcgt ctacgtgctg gagacgaccg agcagcgcga gctcgagacc aaggtcaccc
     1141 agacgcagaa gatggagctg gtcggccagc tcgccggggg catcgcccac gacttcaaca
     1201 acgtgctgtc tgccatcatc ctggcggccg actttctgct caatgcgcac aagccgaccg
     1261 atccgtcgtt ccaggacatc atgcagatca agcagaatgc caaccgggcg gcgagcctgg
     1321 tccggcacct gctcgccttc tcgcgcaagc agaccatgcg cccgcaggtg ctcgacgtcg
     1381 gcgaggtctt gagcgacctc accatgctgc tgcgccggct gatcggcgag aaggtcgccc
     1441 tcgacgtggt tcacggccgc gatctctggc cggtcaaggt cgacatttcc cagttcgagc
     1501 aggtggtcgt gaacctcgcg gtcaacgccc gtgacgccat gcccgatggc ggccggctca
     1561 cgctgcgcac cgccaacgtc accggcaagg agtgcgagcg ctatcacgcc aagggcatgc
     1621 ccgcggccga ctacgtgctg gtcgaagtcg tcgataccgg caccggcatc ccggcagcga
     1681 tcgtcgacaa gatattcgag ccgttcttct cgaccaagga ggtgggcaag ggcaccggac
     1741 tcggactctc caccgtctac ggcatcatca agcagaccgg cggcttcgtg tatgtcgact
     1801 cggccgagca caagggctcg accttccgca tcttcctgcc gcggcacgtc gctggcgccc
     1861 aggaagcggc cgcggagcgg gcggccgagg ccgcggcggc ggcgcctctg gaaacggtcg
     1921 ctgcagccga ggagagcagg cgcgcggcga acgccgatct caccggccgc ggcacgatcc
     1981 tcctcgtcga agacgaagac ggcctgcgcg ctctcaatgc ccgcggtctt gcctcacgcg
     2041 gttataccgt gctcgaagcc ggcaacggtg tcgaggcgat cgatgtgctg gagaaggccg
     2101 acggacaggt cgatctcgtg gtctccgacg tggtcatgcc ggagatggac ggcccgaccc
     2161 tgctgcgcga attgcgcaac cgcaacccga gcctgaagat catctttgtt tccggctacg
     2221 ccgaggacgc cttccagaag catcttcccg agcacggcca gttcgccttc ctgccaaagc
     2281 cgttcacgct caagcagctc gtcgccgccg tgaaggacac gctggcggcc tgatgtcacc
     2341 ttgcaaggcg ggaggatttt agcgcgcggg agcgtcgctg tggcaggaaa gcggaacggc
     2401 tgccgcgctc gccggcggcc aggtcggcac gtcgcatttg gtgcaggcgc cgagcatgag
     2461 gccgacaccg gcgacggcca ggagccgtgc caaccaagtc ccagcgctgg caacaatacg
     2521 cggcatgatt ccccttgatt ccctttggcc ttctctcgtc gcggtccgct gcaccccgat
     2581 acgagccgag tgcggccgcg ctatggcgcg acatggacga tgggagcgta tcgctcgcag
     2641 atttccatta tcttagcgga tcggaggctc ccccgtcatc tccctgcaag gggcggcgga
     2701 ggggcgcaat cttgatgctt tgaacaggga gagaacgcat ggacattcga gcgaacggat
     2761 cagcgccgtc gcggcgcgcg cctgccgact ggttcaccgg cacggtgtgg caggaaccgg
     2821 tcatcgagtc gccggcgccc ggaaacgtgc gcgccaccta cgtgcacttc gagcccggcg
     2881 ggcgcacgaa ctggcacacg catcccgccg gccagaccct ttacatcctc cacggcaccg
     2941 gccgcgtgca gagctggggc ggcaaggtgc gcgaagtccg ccccggcgac gtggtgtggt
     3001 ttccgccggg cgaaaagcat tggcacggcg cgggcccggc gacgatgatg acgcacctcg
     3061 ccatcaccga agtgctcaac ggcaagttcg tcgagtggct cgagccggtg acggacgagc
     3121 agcacaaggc atcggcaggc tgaacatgcg ctacgagctc tattactggc cgaccatcca
     3181 gggccgcggc gaattcatcc gcctcgcgct cgaagaggcc ggcgccgact atgtcgacgt
     3241 cgcgcggcgc aagggcaaaa gcggcgtgcc ggcgatgatg aaacttctcg acggcaaggg
     3301 cgcggcccgg ccgcccttcg cgccgccgtt gctgaaagcc ggcaagctcg tcgtggcgca
     3361 gaccgcgaac atcctgttct atctcgggcc gcacctgaaa ctcgcaccgc gcgacgaggc
     3421 gggacggctc tgggcgcatc agttgcagct caccatctcc gatctcgtcg tggagattca
     3481 cgacactcac catccggtct ccggctggct ctatttcgag gagcagcgcc cggcggcgcg
     3541 gcggcgcagc caggatttct ggcgctatcg tgtgccgaaa ttcctcggct acttcgagcg
     3601 cgtgctgcag aagaacggcg gccaatacct tatcggccgc cggctgagct acatcgacct
     3661 ctcgctgttc caggtcgtcg agggcctgcg ctacgccttc cccaagcaca tgaagcggtt
     3721 cgagaagaag gtgccgggcc tgatcgcgct gtacgacggc gtcgccaacc gcccgcgcat
     3781 caaggcctat ctcgcctcga aacggcgcat tccgttcagc cagtggggca tctaccgcta
     3841 tttcacggag ctggacggct gacgtcggct tgggcgcgcc gcggccgccg ccgatccgcg
     3901 aagcgtcggg gcggctccgc ggctgccgcc tcgggcccta cggcgtcctg cgcgctgacg
     3961 cgtgatgatg gcaagatgac cgcg
//
LOCUS       DATMQB010000053         5474 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1253624, whole genome shotgun sequence.
ACCESSION   DATMQB010000053 DATMQB010000000
VERSION     DATMQB010000053.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5474)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5474)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5474
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1253624"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..345)
                     /locus_tag="VNY79_01875"
     CDS             complement(<1..345)
                     /locus_tag="VNY79_01875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="capsular biosynthesis protein"
                     /protein_id="HWX71227.1"
                     /translation="MSPRRALVVAHDLLATAAAVVASFFIRFEAAGLVERGDKLLIFL
                     PGFIVYAGIIYFLFHLYESKWRFASLPDLMNIMRAATVLAVSLLVLDYILVAPNVLGQ
                     FFFGKITIALYWV"
     gene            complement(407..1186)
                     /locus_tag="VNY79_01880"
     CDS             complement(407..1186)
                     /locus_tag="VNY79_01880"
                     /inference="COORDINATES: protein motif:HMM:NF016800.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-antigen ligase family protein"
                     /protein_id="HWX71228.1"
                     /translation="MPVKDYIFQSGIFLICAFALIGAACDFWRAGKRGIPVALALLAA
                     LFIADIAFVAVSRTVLLVAPLLVIALGYRQFGVKGVLAAGLVAGALASALWLESSYLR
                     TRIADSMAELRGYLDANTASSTGEHLEFLKKSWRIVADAPAIGHGTGSIAEEFRRART
                     GETGAASVAPVNPHNQIFAVAIQLGLIGVAVLLAMWAAHFMLFRGAGLVAWIGMIIVV
                     QNVVSSLFNSHLFDFSQGWLYVFGVGVAGGTVLNKRGGAAI"
     gene            1209..2282
                     /locus_tag="VNY79_01885"
     CDS             1209..2282
                     /locus_tag="VNY79_01885"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71229.1"
                     /translation="MTPVSAKAPRRCEEARGGDEKAAQHKHAAVGAVELRQQQGNGEE
                     PVKAAEALEPLAPGDRGPEHAERPKRPQQHRQAARGGSNLAAEGVDIERGQPGEKPDD
                     DKNRGRRCRPGERQRDADREPVGKPQEALPVGQPCARARLHCREQDRLQCLLKASDRG
                     WSKARRCVVKCGPAINGRPWGVAVSWSETILAALKENDIRLVTYVPDNVLTPLIKGVA
                     ADNYFISVPATREDEAVGALTGAYMGGLRGVAMMQTSGFALIANALASLVVPYQIPAV
                     LVISERGAMGEFNVGQVLIARTMRPTLDSLGILHHTLTDAATLHFIVNSSIKQAFTTQ
                     APVALILSPLLTGGNPASYAQLI"
     gene            2299..2913
                     /locus_tag="VNY79_01890"
     CDS             2299..2913
                     /locus_tag="VNY79_01890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HWX71230.1"
                     /translation="MSNERQSVQTLNRTELTRRLVRRLTHEEAVIGGIGNANFDMFAV
                     GHRPQNFYMLGSMGLTCPIALGVALAQPQRGVLALEGDGSILMALGCLATIANVKPRN
                     LTIIIWDNGLYQITGKQPTATSGPTDIVAVARGAGITNSAWVRDEAHFEALIDRRFDE
                     GGPALIAAKIDDQPAAGPAVRDPALIRNRFMKGLGTSRGGVLDA"
     gene            complement(2977..4254)
                     /gene="hmgA"
                     /locus_tag="VNY79_01895"
     CDS             complement(2977..4254)
                     /gene="hmgA"
                     /locus_tag="VNY79_01895"
                     /EC_number="1.13.11.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004411 - homogentisate 1,2-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homogentisate 1,2-dioxygenase"
                     /protein_id="HWX71231.1"
                     /translation="MYQPGFGNHFVTESVPDALPVGRNSPQRPPYGLYAEQISGTSFT
                     TARAENRRTWTYRIRPSVVHRPYARIDNGMIRSAPFNEVDATPTQLRWSPLPIPQKPA
                     DFVEGIVTFGGNGDVATQVGTAVHVYAANRSMSNRCFYNADGEMLIVPQQGRARFVTE
                     LGVIEAAPGEIVVIPRGLRFRTELPDGPSRGYICENYGAMLRLPELGPLGANGLANAR
                     DFLSPVAAYEDTEAPTLLVAKFQGNLWAAEMDHSPLNVVAWHGNLAPYKYELARFNVI
                     GTISFDHPDPSIFSVLTAPSDLPGAANIDFVIFPPRWLVGEDTFRPPWFHRNVMTEFM
                     GLVHGAYDAKAEGFLPGGASLHNCMTAHGPDAETWKRATNAQLKPHKIEDTMAFMFES
                     RFAMRLTRYAAESSELQRDYFEGWQGLEKHFSV"
     gene            4721..>5474
                     /locus_tag="VNY79_01900"
     CDS             4721..>5474
                     /locus_tag="VNY79_01900"
                     /EC_number="4.2.2.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HWX71232.1"
                     /translation="MRPILALGFVLLGLNSAVPEPKHSNTVLAAADTPSAEPITIDRL
                     IGSIDVKSDVVVPSLEVIEASHEQEDSIAEPPSGEAAAATTAIDRDIESLNGLCNTLF
                     DSAQHNDLPVPFFANLIWQESRLRHNAVSPVGAQGIAQFMPRVAAAVGLTDPFDPRQA
                     LPASARLLHELRERFRNLGFAAAAYNAGVHRVSEWLLHGGKLPRETQTYVVRITGRSV
                     DEWRKSPPGESALRFTRPLPCRELPAFASLELE"
BASE COUNT         1023 a         1775 c         1814 g          862 t
ORIGIN      
        1 cacccaatag agggcgatgg tgatcttgcc gaagaagaac tgcccgagca cgttgggcgc
       61 gaccaggatg tagtcgagca ccagcagcga tacggccagc accgtcgccg cgcgcatgat
      121 gttcatcagg tccgggagcg aggcgaaccg ccacttcgat tcgtagagat gaaagaggaa
      181 atagatgatg ccggcataga cgatgaagcc gggcaggaag atgagcagct tgtcgccccg
      241 ctccacgagg ccggccgcct cgaagcggat aaagaagctc gcgacaaccg ccgccgcggt
      301 cgccagaaga tcgtgcgcga cgacgagcgc tctgcgcggg ctcatgttca gtgcgggcat
      361 tgtgcggccg tcttgccggg accccctagc cttcccatac cgggctttag atcgctgcgc
      421 caccccgctt gttgagcaca gtgccgccag cgacgccgac gccgaagacg tagagccagc
      481 cctggctgaa atcgaacaga tgcgagttga acagcgagga gacgacgttc tgcacgacga
      541 tgatcatgcc gatccaggcg accaggccgg cgccgcggaa cagcatgaaa tgcgccgccc
      601 acatcgccag cagcacggcc acgccgatga ggccgagctg gatcgcgacc gcgaaaatct
      661 gattgtgcgg gttgaccggc gcaacgctgg cggcgccggt ctcgcccgtc ctggcgcggc
      721 gaaattcttc ggcgatcgag ccggtaccgt ggccgatggc gggagcgtcg gcaacgatgc
      781 gccacgactt tttcaggaac tcgagatgct ctccggtcga gcttgcggta ttggcgtcga
      841 ggtagccgcg caattcagcc atcgaatcgg cgatccgcgt gcgcaggtag gaggattcaa
      901 gccacagcgc actggcgagc gcgccggcaa caagacccgc ggcgagtacg cccttcacgc
      961 cgaactgccg gtaaccgagc gcgatgacga gcagcggggc aacgaggagc acggtgcggc
     1021 tcaccgcgac gaaagcgata tcggcgatga acagcgccgc gagcagcgcg agcgcaacgg
     1081 ggatccccct cttccctgcg cgccagaagt cgcaggccgc gccgatgagc gcgaaggcgc
     1141 aaataagaaa aatgccactc tggaatatgt agtccttgac cggcacccca ggggactttc
     1201 ccggtatcgt gacgccggtc agcgcaaagg ccccacgacg ttgcgaggag gcacgtggcg
     1261 gagacgagaa agccgcgcag cacaagcatg ccgcggtcgg agccgtggaa ttgcgccagc
     1321 agcaggggaa tggcgaggag ccggtgaaag ctgccgaggc cctcgaaccg ctcgccccag
     1381 gagaccgcgg ccccgagcat gccgagcgcc ccaagcgccc acagcagcac cggcaagccg
     1441 cccgcggcgg aagcaacctc gcggcggagg gcgttgacat cgagcgtggg cagccaggcg
     1501 agaaaccaga cgacgataag aacagaggtc gccgatgtcg accaggggag cgacagcgcg
     1561 acgccgaccg cgagccagtc ggcaagccgc aggaagcctt gccggtcggg cagccttgcg
     1621 cgcgggctcg tcttcattgt cgggagcagg atcggttaca gtgcctgttg aaggccagcg
     1681 accgcggttg gtcgaaggcc cgcagatgtg tagttaagtg cggccccgcc atcaacggcc
     1741 ggccgtgggg agttgccgtg agctggtcgg aaacgatact cgccgcgttg aaggaaaacg
     1801 acatccgtct cgtcacctat gtgccggaca acgtgctcac gccgctgatc aagggcgtcg
     1861 ctgcggacaa ttatttcatc tccgtgccgg ccacgcgcga ggacgaagcg gtcggggcgc
     1921 tcaccggcgc ctatatgggc ggcctgcgcg gcgtcgcgat gatgcagacc agcggcttcg
     1981 cgctgatcgc caatgcgctc gcctccctgg tggtgcccta tcaaattccc gccgtgctcg
     2041 tgatctcgga gcgcggcgcc atgggcgaat tcaacgtcgg ccaggtgctg atcgcgcgca
     2101 ccatgcgccc gacgctcgat tcgctcggca ttctgcatca cacgctcacc gatgccgcga
     2161 cgctgcactt catcgtcaat tcgtcgatca agcaggcgtt cacgacgcag gcgccggtcg
     2221 ccctcattct ttccccgctg ctgaccggcg gcaaccccgc ctcgtatgcc cagctgatat
     2281 gacccgaggg acgacggcat gagcaacgag agacaatcgg tccaaacgct caaccgcacg
     2341 gagctgacgc ggcgcctggt gcggcggctc acgcacgagg aggcggtgat cggcggcatc
     2401 ggcaacgcca atttcgacat gttcgccgtc ggccaccggc cgcagaactt ctacatgctc
     2461 ggcagcatgg gcctgacctg cccgatcgcg ctcggcgtcg cgctggcgca gccgcagcgc
     2521 ggggtgctcg cgctcgaagg cgacggctcg atcctcatgg cgctcggctg cctcgccacc
     2581 atcgccaacg tcaagccgcg caacctcacc atcatcatct gggacaacgg cctctatcag
     2641 atcaccggaa agcagccgac ggcgaccagc ggcccgaccg acatcgtcgc ggtcgcgcgc
     2701 ggcgccggca tcaccaacag cgcctgggtg cgcgacgagg cgcatttcga ggcgctgatc
     2761 gaccgccgct tcgacgaagg cgggccggcg ctgatcgcag cgaagatcga tgatcagccg
     2821 gccgccgggc cggcggtgcg cgatcccgcg ctcattcgca accgcttcat gaagggactc
     2881 ggcaccagcc gcggcggggt gctggacgct taactaaaag cgcgatgatc cagaaccatc
     2941 attgcgagga gcccaaaggg cgacgcagca atcggctcaa accgaaaaat gcttctccag
     3001 cccctgccag ccttcgaagt agtcgcgctg cagctctgag gattccgccg cgtagcgcgt
     3061 cagccgcatg gcgaagcggc tctcgaacat gaacgccatc gtgtcctcga tcttgtgcgg
     3121 ctttagctga gcattggttg cgcgcttcca ggtctcggcg tcggggccgt gtgcggtcat
     3181 gcaattgtgc aggctggcgc cgccgggcag gaatccttcc gccttggcgt cataggcgcc
     3241 gtgcacgagg cccatgaact cggtcatgac gttgcggtgg aaccagggcg gccggaacgt
     3301 atcctcgccg acgagccagc gcggcgggaa gatgacgaaa tcgatgttgg cggcgcccgg
     3361 caggtcagaa ggcgcggtga gcacactgaa gatcgacgga tcgggatgat cgaaactgat
     3421 cgtgccgatg acgttgaagc gcgccagctc gtatttgtag ggagcgagat tgccgtgcca
     3481 ggcgacgacg ttgagcggcg agtggtccat ctccgccgcc cacaggttgc cctggaattt
     3541 cgcgacgagc agcgtcggag cctccgtgtc ctcgtaggcg gcaacggggc tgagaaaatc
     3601 gcgcgcattg gcaagaccgt tggcgccgag gggccccagc tccggcagcc gcagcatggc
     3661 gccgtaattc tcgcagatgt agccgcgcga cgggccgtcc ggcagctcgg tgcgaaagcg
     3721 caagccgcgc gggatcacga cgatctcgcc cggcgccgct tcgatcacgc ccagctcggt
     3781 gacgaagcgg gcgcggccct gctgcggcac gatgagcatt tcgccgtcgg cgttgtagaa
     3841 gcagcggttg ctcatcgagc ggttggccgc atagacgtga accgccgtgc cgacctgggt
     3901 cgcgacgtcg ccgttgccgc cgaaagtcac gatgccctcg acgaagtcgg ccggcttctg
     3961 cgggatcggc agcgggctcc agcgcaattg ggtcggcgtc gcatcgacct cgttgaacgg
     4021 ggcgctgcgg atcatgccgt tgtcgatgcg cgcgtacggg cgatgcacga cggacggccg
     4081 gatgcggtaa gtccacgtgc gccgattctc ggcgcgcgca gtggtaaacg aggtgccgga
     4141 gatctgttcg gcgtagaggc cgtacggggg ccgctgcggc gagttgcggc cgacggggag
     4201 cgcgtcgggg actgactctg tgacgaaatg gttaccgaag ccgggctggt acaccagcgc
     4261 cgcctccccg ggcaacgcgc gaatggctgc cttccgggac ttgatatctg atttggttat
     4321 ttggctcatg agcactcccg gcagctgtca cgaccgcccc acgctcacca cgggcaaagc
     4381 gaagcaattc agccctttgc agcgttaacg ctcagtccgg cgccgcctcg gagccctcgt
     4441 gggcgattgg tctcaatcgt aactatcggt cttcgccgcc cgccgcaagg tgtttgaaac
     4501 gattctaagc ggggccgcgc gagtttcata atcacaccgt cgtcgcatct tggcttggca
     4561 aacgcccgat atagccgcaa cgaattctta atatctccaa aaaagcgccc gcttgcctgg
     4621 gcatcagccg caagtcagtg aggggacttt cctttttcca ttcgcttggc gcgggcgtca
     4681 ccggacgctg ctgcggcacg attcctgcga gaggggggcg atgcgtccga ttttggcact
     4741 agggttcgtg ttgctcggcc tcaacagcgc cgtgcccgaa cccaaacatt cgaacactgt
     4801 cctggctgcc gccgatacgc cttctgccga accgatcaca attgatcgct tgatcggcag
     4861 catcgacgtg aaaagcgatg tggtcgtgcc gtcgctggaa gtgatcgagg cgtcgcacga
     4921 gcaagaggac agcatcgccg agccgccgtc gggcgaagct gcggccgcga ccaccgccat
     4981 cgaccgggac atcgagtcgc tcaacggact ctgcaatacg cttttcgatt ctgcgcagca
     5041 caacgatctg ccggtaccct tcttcgccaa tctgatctgg caggagagcc ggctgcggca
     5101 taacgccgtg agcccggtcg gagcgcaagg catcgcgcag ttcatgccgc gcgtcgccgc
     5161 cgccgtcggt ttgacggacc cgttcgatcc gcggcaggca ctgccggcct cggcgcggct
     5221 gctgcacgag ctgcgcgagc gcttccgcaa tctcggattt gcggctgccg cctacaatgc
     5281 cggcgtccac cgcgtcagcg aatggctgct gcacggcggc aagctgccgc gcgagacgca
     5341 gacctatgtc gtgcgcatca ccggccgctc ggtggacgaa tggcgcaaaa gcccgcccgg
     5401 cgagtcggcc ctgcgcttca cgcggccgct gccatgccgc gagcttccgg ccttcgccag
     5461 cctggagctg gagc
//
LOCUS       DATMQB010000054         6862 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3113431, whole genome shotgun sequence.
ACCESSION   DATMQB010000054 DATMQB010000000
VERSION     DATMQB010000054.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6862)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6862)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6862
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3113431"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..184)
                     /locus_tag="VNY79_01905"
     CDS             complement(<1..184)
                     /locus_tag="VNY79_01905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003531162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HWX71233.1"
                     /translation="MAQFTLPKNSRVTEGKTWAYPTGAQDVREYRIYRWNPDDGKNPR
                     MDTYYVDCADCGPMVLD"
     gene            complement(322..2157)
                     /gene="sdhA"
                     /locus_tag="VNY79_01910"
     CDS             complement(322..2157)
                     /gene="sdhA"
                     /locus_tag="VNY79_01910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase flavoprotein subunit"
                     /protein_id="HWX71234.1"
                     /translation="MAANGANGGGAAPATNGRAYPIEDHVYDVVIIGAGGAGLRAVVG
                     CSEAGLRTACITKVFPTRSHTVAAQGGIAAALGNMGEDDWRWHMYDTVKGSDWLGDQD
                     AIEYLCRNAPEAVYELEHWGLPFSRREDGKIYQRPFGGMTTHYGKGIAQRTCAAADRT
                     GHAMLHTMYGQALRHSAEFFIEYFAIDLMMDEDGRCRGVVALNLEDGSIHRFSAQMTV
                     LATGGYGRAYWSCTGAHTQTGDGNAMVLRAGLPLEDMEFVQFHPTGVYGAGVLITEGA
                     RGEGAYLVNSEGERFMERYAPSAKDLASRDVVSRAMTIEIREGRGVGPKKDHIFLHLD
                     HLDPTILAERLPGITESARIFAGVDLTREPVPIVPTVHYNMGGIATNYHGEALIKKNG
                     NPDHVVPGMMALGEAACVSVHGANRLGSNSLIDLVVFGRAAALRCAEMLTPNDRQPEL
                     PKDSAERPLSRLDKFRQASGGTPTAQLRAKMQHVMQTNCAVFRNSDVLEQGSKLIHEV
                     FDGIDDIRVSDRSLIWNSDLIETLEFVNLIEQAVVTVDSALNRTESRGAHAREDFPER
                     DDKNWMKHTLAWMDPKGTVTIDYRPVHTYTLTNEVSYIEPRARVY"
     gene            complement(2160..2534)
                     /gene="sdhD"
                     /locus_tag="VNY79_01915"
     CDS             complement(2160..2534)
                     /gene="sdhD"
                     /locus_tag="VNY79_01915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045282 - plasma membrane succinate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, hydrophobic membrane
                     anchor protein"
                     /protein_id="HWX71235.1"
                     /translation="MRTPLARVRGRGAARSGTRDFWRQRLTAVANIPLTIAAIIIIIM
                     LLGRNQAAVAQILGAPLVAIIMLLFVASVTVHMRIGMQVIIEDYVHDESTKLTLIMAN
                     TFFAIAVALASAFGILKLSFGV"
     gene            complement(2552..2962)
                     /gene="sdhC"
                     /locus_tag="VNY79_01920"
     CDS             complement(2552..2962)
                     /gene="sdhC"
                     /locus_tag="VNY79_01920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045282 - plasma membrane succinate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0000104 - succinate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase, cytochrome b556
                     subunit"
                     /protein_id="HWX71236.1"
                     /translation="MAEIKAPAERPLSPHLQIYRPMLTMMMSIVHRITGIGNYFGTLI
                     LAWWLIAASAGPNAYAKFEWFAGSIIGRVILFGYTWSVIHHMLGGIRHLIWDTGRGFG
                     PSEREWLAAANLVGSIAITVVLWIVGLLAMGGPR"
     gene            3171..4139
                     /locus_tag="VNY79_01925"
     CDS             3171..4139
                     /locus_tag="VNY79_01925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019903400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HWX71237.1"
                     /translation="MRFDLADLSLFRHVVEAGSITHGAERAHLALAAASTRIRNMEVA
                     LGVALLTRGRAGVAPTPAGRTLLQHARAILRQAERLHEDLGAYGSGVAGQIRVLSNTN
                     ALTEFLPEALSSFLTAHPNVSVDLEERLSDEIVGLIAEGVADLGIVAGTVDAGALATY
                     PFRRDRFVLVVACDHPLASRAKVDFDELLDHDFVGLDRASALQRFLTSKAVRIGRPLR
                     LRVQLRSFDAVCRLVECKVGIGIVPETTARRAARTMAIAKVPLADSWAVRELTICVRD
                     INELPLYARQLVEHLRAPDVRSGDAGEGKERTEIRVGQGHRCISTQ"
     gene            complement(4115..5164)
                     /locus_tag="VNY79_01930"
     CDS             complement(4115..5164)
                     /locus_tag="VNY79_01930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC family dehydratase"
                     /protein_id="HWX71238.1"
                     /translation="MSKTNPGNCFEDFRIGQIIRHATPRTVTSGDIALYTSLYGTRFA
                     VQSSDAFARAIGYPRAPVDDFLVFHIVFGKTVPDVSLNAVANLGYAGCYFRNPVFPGD
                     TLSALSEVIGLKENSSRKTGVVYVRTTGYKQDDTPVLEYVRWVMVRKRDEAAPAPGDH
                     VPRLPTELDPKVLGEACPPIALSAYDAALAGSPHRFADYQVGERIDHVDGVTVEEAEH
                     QIATRLYQNTARIHFNQYTEGKGRFGRRLIYGGHVISLARALSFNGLANAFHVAAING
                     GRHVAPLFAGGTVFAWSEVLGKSELPGRQDVGALRLRTIAARDRPCADFPFKSGADYD
                     PAILLDLDYWVLMQR"
     gene            5394..5972
                     /locus_tag="VNY79_01935"
     CDS             5394..5972
                     /locus_tag="VNY79_01935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fasciclin domain-containing protein"
                     /protein_id="HWX71239.1"
                     /translation="MSKRFALFASAAFLAFAAVAPAAFAAETMADKTVNVGGAPMYPS
                     KNIIQNAVNSKDHTTLVAAVKAAGLVDTLQGPGPFTVFAPTNAAFGKLPVGTVDNLLK
                     PENKGTLTKVLTYHVVPGRMTAVNLMKAVKEGEGEAKLKTVAGDWLMVKQAGPGKLTV
                     TDAKGDVAMVTIADVLQSNGVIHVIDTVLLPM"
     gene            6272..>6862
                     /locus_tag="VNY79_01940"
     CDS             6272..>6862
                     /locus_tag="VNY79_01940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome b/b6 domain-containing protein"
                     /protein_id="HWX71240.1"
                     /translation="MSSEAATNVSMTPDRAARPLIHPVWVRVTHWINALAMLMMIGSG
                     WQIYNASPLFGFTFPTQIALGNWLAGALLWHFAAMWLLVINGVVYVTLGILTGRFRRK
                     LFPISPGEVWRDFLAALRGRLAHDDLTVYNAVQRLLYVGILLTGVVIVLSGLSIWKPV
                     QFQALTAFFGGYNTARYVHFAAMTAIVAFLVVHVTLA"
BASE COUNT         1119 a         2179 c         2339 g         1225 t
ORIGIN      
        1 cgtcgagaac catcggcccg caatcggcgc agtcgacgta ataggtatcc atccgcgggt
       61 tctttccgtc gtccggattc cagcggtaga tgcggtattc gcgcacgtcc tgcgcgccgg
      121 tggggtaggc ccaggtcttg ccttcggtaa ccctggaatt cttgggcaga gtgaattggg
      181 ccatgccgta tcgccttcgc tttcgtgttt ctctgcttct tagagcgtgt cccgtttcct
      241 tcggaatcgg ggcacgctcc agaattctac gtggcgcatg ttcttggcgg cgaaccggta
      301 cccacttcgc cggaacatgc gctagtacac ccgcgcccgc ggctcgatat aggacacttc
      361 gttggtgagc gtgtaggtgt gcaccgggcg gtagtcgatg gtgacggtgc ccttgggatc
      421 catccaggcg agcgtgtgct tcatccagtt cttgtcgtcg cgctcgggaa aatcctcgcg
      481 cgcgtgcgcg ccgcggcttt cggtgcggtt gagcgccgag tccacggtga ccacggcctg
      541 ctcgatcagg ttgacgaatt cgagcgtctc gatcaggtcc gaattccaga tgagcgagcg
      601 gtcgctgacg cggatgtcgt cgatgccgtc gaagacctcg tggatgagct tcgagccctg
      661 ctctagcaca tcgctgttgc ggaacacggc gcaattggtc tgcatcacgt gctgcatctt
      721 ggcccgcaac tgcgccgtcg gcgtgccgcc cgaggcctgg cggaacttgt cgagccgcga
      781 cagcggccgc tcggcggaat ccttcggcag ctcgggctgc ctgtcgttgg gcgtgagcat
      841 ctcggcgcag cgcagcgccg ccgcgcggcc gaagaccacg aggtcgatca gcgagttcga
      901 tcccagccga ttggccccat ggacggagac gcacgccgct tcgccgagcg ccatcatccc
      961 gggcacgacg tgatcgggat tgccgttctt cttgatcagc gcttcgccgt ggtagttcgt
     1021 ggcgatgccg cccatgttgt agtgcacggt cggtacgatc ggcaccggct cgcgggtgag
     1081 gtcgacgccg gcgaagatgc gcgccgactc ggtgattccg ggcagccgct cggccaagat
     1141 cgtcgggtcg agatggtcga gatggaggaa gatgtggtcc ttcttcggcc cgacgccgcg
     1201 gccttcgcgg atctcgatgg tcatggcgcg ggagacgacg tcgcgcgagg cgaggtcctt
     1261 ggccgagggc gcgtagcgct ccatgaagcg ctcgccttcg gaattgacca gataggcgcc
     1321 ttcgccgcgc gcgccctcgg tgatgagcac gccggcgccg tagacgccgg tcgggtgaaa
     1381 ctgcacgaac tccatgtcct cgagcggcag gccggccctc agcaccatgg cgttgccgtc
     1441 gccggtctgg gtgtgcgcgc cggtgcatga ccaataggcg cgcccgtagc cgccggtggc
     1501 gagcacggtc atctgcgcgc tgaagcgatg gatcgagccg tcctcgagat tgagggcgac
     1561 gacgccgcgg cagcggccgt cctcgtccat catcaggtcg atggcgaaat attcgatgaa
     1621 gaactcggcc gaatggcgca gcgcctgccc gtacatggtg tgcagcatgg catggccggt
     1681 gcgatcggcg gcggcgcagg tgcgctgcgc gatgcccttg ccgtagtgcg tggtcatgcc
     1741 gccgaacggc cgctgataga tcttgccgtc ttcccggcgc gagaacggca gaccccaatg
     1801 ctcgagctcg tagaccgctt ccggcgcgtt gcggcagaga tattcgatgg cgtcctggtc
     1861 gcccagccag tccgacccct tcacggtgtc gtacatatgc cagcgccagt cgtcctcgcc
     1921 catgttgccg agcgcggcgg cgatgccgcc ctgcgccgcg accgtatgcg agcgcgtcgg
     1981 aaacaccttg gtgatgcagg cggtgcgcaa tcctgcttcg ctgcagccga cgacggcgcg
     2041 caagccggcg ccgccggcgc cgatgatgac cacgtcgtag acgtgatctt cgatcgggta
     2101 ggcgcggccg ttggtggccg gagccgcgcc gcctccgttg gcgccgttgg cggccatggt
     2161 cacactccga acgagagctt gaggatgccg aacgccgaag ccagggcgac ggcgatggca
     2221 aagaacgtat tggccataat caaggtgagc ttggtggatt catcgtgcac gtagtcctcg
     2281 atgatcacct gcatgccgat tcgcatatgc acggtgaccg aggcgacgaa cagcagcatg
     2341 atgatggcga cgagcggcgc gccgagaatc tgcgcaaccg ccgcctggtt gcggccgagc
     2401 agcatgatga tgatgatgat cgcggcgatg gtcagcggga tgttggcgac ggcggtgagg
     2461 cgctggcgcc agaaatcgcg ggtgccggat cgggcggcgc cgcggccgcg gacccgggcg
     2521 agcggggtgc ggatatgctt gacgttgtcg ctcaccgcgg tcctcccatc gccaagaggc
     2581 cgacgatcca gagcaccacc gtgatcgcaa tcgagccgac cagattggcg gcggcgagcc
     2641 actcgcgctc gctcgggccg aagccgcgac cggtgtccca gatcaggtgg cggatgccgc
     2701 cgagcatgtg atggatcacc gaccaggtgt agccgaacag gatgacgcgg ccgatgatcg
     2761 agccggcgaa ccattcgaac ttggcgtagg cgttcggccc cgcggaagcg gcgatcagcc
     2821 accacgccag gatgagcgtg ccgaaatagt tgccgatgcc ggtgatgcga tggacgatcg
     2881 acatcatcat cgtcagcatc ggccggtaga tttgcaggtg cggcgacagc ggtcgctcgg
     2941 cgggggcctt gatttcggcc atcgtactcg tccgaattcg cccggccttg gcggcaagcc
     3001 ggggaccgtt cctatccaat ccgcgcgcct gccgcaatgt cgccagacgt gttgccggtg
     3061 cgctgccggg tttgtgcttc gccatacacg aaattatggg attgaaatct ccgagcacaa
     3121 ttgacatttg gtaaagcctg gattcgccga atgcgaagga aggccgttct gtgcgcttcg
     3181 acctggccga tctcagcctg tttcgccacg tggtcgaggc cggcagcatc acccacggcg
     3241 ccgagcgagc gcaccttgcg ctcgccgccg cctcgacccg catccgcaac atggaggttg
     3301 cgctcggcgt cgcgctgctc acgcgcggac gggcgggcgt cgcgccgacc ccggcgggcc
     3361 gcacgctgct gcagcatgcg cgggcgatcc tgcggcaggc cgagcgtctg cacgaggatc
     3421 tcggcgctta tggcagcggc gtcgcgggac agatccgtgt cctctcgaat accaacgcgc
     3481 tgaccgagtt cctgccggaa gcactgagct cgttcctgac cgcacacccg aatgtcagcg
     3541 tcgatctgga agaacgcctg agcgacgaga tcgtcggcct catcgccgaa ggcgtcgccg
     3601 acctcggcat cgtcgccggc accgtcgacg ccggtgcgct cgccacctat ccgttccgcc
     3661 gcgaccgctt cgtgctcgtg gtcgcgtgcg accatccgct cgcgagccgc gcgaaagtcg
     3721 acttcgatga attgctcgac cacgatttcg tcggcctcga tcgcgccagc gcgctgcagc
     3781 gcttcctgac cagcaaggcg gtacgcatcg gccggccgtt gcggctgcgc gtgcaattgc
     3841 gcagcttcga cgccgtgtgc cggctggtcg aatgcaaggt cggcatcggc atcgtgccgg
     3901 agacgacggc gcgccgcgcc gcgcggacga tggcgattgc caaggtgccg ctggcggatt
     3961 cctgggcggt ccgcgagctg acgatctgcg tgcgcgacat caacgagctg ccgctctatg
     4021 cgcggcagct cgtggagcat ttgcgggccc cggatgtgcg gtctggagat gcaggagagg
     4081 ggaaggagcg cacggaaatc cgggtcggac aaggtcaccg ctgcatcagc acccaatagt
     4141 cgagatcgag caggatcgcg ggatcgtagt ccgcgccgga cttgaatgga aaatctgcgc
     4201 aaggccggtc acgcgcggcg atggtgcgca gccgcagcgc gccgacgtcc tgccggccag
     4261 gcaattcgga cttgccgagc acttccgacc aggcgaacac ggtgccgccg gcaaacagcg
     4321 gcgccacgtg gcggccgccg ttgatggcgg cgacatggaa ggcgttggcg agcccgttga
     4381 aggagagggc gcgggcgagc gagatcacgt gcccgccgta gatcagccgc cggccgaagc
     4441 ggcccttgcc ttcggtgtac tggttgaaat gaatgcgcgc cgtgttctga tagagccggg
     4501 tcgcgatctg gtgctcggcc tcctcgacgg tgacgccgtc gacgtggtcg atgcgctcgc
     4561 cgacctgata atcggcgaag cgatgcgggc tgccggccag cgcggcgtca taggccgaga
     4621 gcgcgatggg cggacaggct tcgcccagta ccttgggatc gagctcggtc ggcaggcggg
     4681 gcacatgatc gcccggcgcg ggcgccgcct cgtcgcgttt acgcaccatc acccagcgga
     4741 cgtattcgag caccggcgtg tcgtcctgct tgtagccggt cgtgcgcacg tagacgacgc
     4801 cggtcttgcg gctcgaattc tccttgagcc cgatcacctc ggagagcgcg ctcagcgtat
     4861 cgccgggaaa aaccgggttg cggaagtagc aaccggcata gccgagattg gcgacggcgt
     4921 tgagcgagac gtcaggcacg gttttgccga acacgatgtg gaagacgaga aaatcgtcga
     4981 ccggcgcgcg cggatagccg atcgccctgg cgaacgcgtc cgacgactgc accgcgaagc
     5041 gcgtcccgta cagcgacgta tagagcgcga tatcgccgct ggtgaccgtg cgcggcgtcg
     5101 cgtgccggat gatctggccg atgcggaagt cctcgaagca attgccggga ttcgtttttg
     5161 acattggctt tcctggtgtt gacgcccggc agcgctttgg cgcgccgctt catatcgcag
     5221 cggcactgcc gggaaaagca gcagatcgcc ggcgaggctc gttcacgcgg gcgtgagagc
     5281 gggaatgaaa ccaccgcgcg cggccgccgt atctcgctgc gacgacgctg acgcaggcga
     5341 tcgttccctc ggcggttcgc cgcccgaccc cgttttgcaa catggagtcc atcatgtcca
     5401 agcgcttcgc tttgtttgca agtgccgcct ttctcgcatt cgccgcagtg gcgcccgcgg
     5461 cgttcgcggc tgaaacgatg gcggacaaga cggtcaatgt cggcggcgcg ccgatgtatc
     5521 cgtccaagaa catcatccag aacgcggtga attcgaagga ccacacgacg ctggttgccg
     5581 cagtgaaggc cgccggcctc gtcgataccc tgcagggtcc cggcccgttt accgtgttcg
     5641 ctccaaccaa cgccgcattc ggcaagctgc cggtcggcac cgtcgacaac ctgctcaagc
     5701 ccgagaacaa gggcacgctg acgaaggtgc tgacctatca cgtggtgccg ggacgcatga
     5761 ccgcggtcaa cctgatgaag gcggtgaagg agggcgaggg cgaagccaag ctcaagaccg
     5821 tcgccggcga ctggctcatg gtcaagcagg ccggtcccgg caagctcacc gtcaccgacg
     5881 ccaagggcga cgtcgccatg gtcacgatcg ccgacgtgct gcagtcgaac ggcgtgatcc
     5941 atgtcatcga caccgtgctg ctgccgatgt gatggcgcgt tcggcgcggt gtccttgctc
     6001 cctctccccg ctgtgcgggg agagggatga ggtgaggggc gttgccgccg gactgagatt
     6061 cgcgacgtta tgtgcagcgt acgcggttcg atcggatacg ctcagaatcg cggcgaggcc
     6121 ccctcagccc gaccttctcc ccgtacgcgg ggagaaggag gagcgagcgg ctcacgccgc
     6181 cgtgttgtgg ctctcgaccg gccgtgacat gaatgtgaga cgcgtcgccg ccggcaagtt
     6241 gctatagcta tttcgatcgc gggcagatgt catgagcagc gaagcggcaa caaatgtgtc
     6301 gatgacgccc gaccgcgcgg cgcgcccgct catccacccg gtctgggtgc gggtgacgca
     6361 ctggatcaac gcgcttgcca tgctgatgat gatcggctcg ggctggcaga tctacaatgc
     6421 ctcgccgctg ttcgggttca catttccgac ccagatcgcg ctcggcaact ggctcgccgg
     6481 cgcgctgctg tggcacttcg cggccatgtg gctgctcgtg atcaacggtg tggtctatgt
     6541 gacgctcggc atcttgaccg ggcgtttccg ccgcaagctt ttcccgatca gcccgggcga
     6601 ggtgtggcgc gattttcttg ccgcgctgcg cggccgcctc gcccacgacg atctcacggt
     6661 ctacaacgcc gtgcagcggc tcctttatgt cggcattctg ctcaccggcg tggtgatcgt
     6721 gctctctggg ttgtcgatct ggaagccggt gcagttccag gcgctcaccg ccttcttcgg
     6781 cggctacaat acggcccgct acgtccactt cgcggcgatg acggcgatcg tggcgttcct
     6841 ggtggtgcat gtgacgctcg cc
//
LOCUS       DATMQB010000055         7907 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3733422, whole genome shotgun sequence.
ACCESSION   DATMQB010000055 DATMQB010000000
VERSION     DATMQB010000055.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7907)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7907)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7907
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3733422"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1125)
                     /locus_tag="VNY79_01945"
     CDS             complement(<1..1125)
                     /locus_tag="VNY79_01945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015007187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HWX71241.1"
                     /translation="MSVRKRTWKSPTGEPKEAWVVDYVDQHGDRHLKTFAKKRDADAH
                     HAIVGTAVRAGVHTADSKSVTVTKAAELWLESCEAAGLERATIAAYRQHADLHIAPIL
                     GTLRLSQLTVPLVRGFEDRLRQDGRSPAMVRNARRSLGAILADAQERGLVAQNVVYSL
                     RKRQRSRRVEGNGKLNAGIDIPAPAEMRAIVGKLNPTTGRYRVLLLTAIFTGLRASEL
                     RGLRWDDVDLKRGELHVRQRADRYGAIGRPKSEASERTVPLPPMVVAALREHRLASAR
                     SALGLVFPNIRGGIEHRNSIVKCGFHPAQIAAGVVDQHGGAKYKGLHSLRHFYASWCI
                     NRRVDGGLELPLKLVSERLGHSTVQLTADTYGHLFPRGDDG"
     gene            complement(1255..1827)
                     /locus_tag="VNY79_01950"
     CDS             complement(1255..1827)
                     /locus_tag="VNY79_01950"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71242.1"
                     /translation="MSNRPASARPRAVRMFPRLFGALFGPSGSLRLIVLLVLLALGVA
                     IGGHMYGRRLAASDLAERDTTIQLLRSEGEKLETRYNDQLAQLAALQAKLTNTHAALD
                     AITPSENTYHINPNQSLVVADGHLTIGLIGPPTNEKITLNINGKQQAMAAGDKLRITP
                     DSSTVCQVNLNSFDMFKAVVYAACEMADMR"
     gene            complement(1896..3224)
                     /locus_tag="VNY79_01955"
     CDS             complement(1896..3224)
                     /locus_tag="VNY79_01955"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005743 - mitochondrial inner membrane
                     [Evidence IEA];
                     GO_component: GO:0035632 - mitochondrial prohibitin
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prohibitin family protein"
                     /protein_id="HWX71243.1"
                     /translation="MARYDDLLDEEPPAPKRGWRSFVWRHLPAVTTSLLLALLMIVVL
                     WPNVVITVPSGRVGVLWKRFNGFDIYCWCFVGRGTLLDPRELREEGLHIIAPWDRLFI
                     YDLRLQSSSQSINAISKDGVNVTAQMNIRYQLAHRSVAVLHKFIGPKYLDTVVGPEIG
                     SQAREVISKYTAEEVYTSRDAIQDQVRSSTQKSLGSNLNKLVQPEAMEQPDPKHYNDF
                     LQGAIQILDTLVLSIELPPAIVNAINRQTEQFYLIQEYRFRVAREAEESKRKQIEANG
                     IAAFQQTVSKGISDSYLRWRGIEATLMLAQSQNSKIIIIGAGKDGLPIILNAETAAPG
                     VTPPSGANGTPPPAAPAAPTESAPGSPPGGSSEAAPPAKSSNVSMPPASDKIQAAQPS
                     AAATPSGAPAAPAAPSRSEASAAESILSRINGALHGSAPPPATPGEESKH"
     gene            complement(3224..4888)
                     /locus_tag="VNY79_01960"
     CDS             complement(3224..4888)
                     /locus_tag="VNY79_01960"
                     /inference="COORDINATES: protein motif:HMM:TIGR01194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_function: GO:1904680 - peptide transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015833 - peptide transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic peptide export ABC transporter"
                     /protein_id="HWX71244.1"
                     /translation="MSFLQLVRRGMRGSLRKLVFMSGIGGISSAAILAAINAGAHSAD
                     TSHKPSLWAVALFLISLFLFIKTQTYVTTTVTAEIEAIIHRLRVRLMDDVRHAELLAI
                     EALGRSRIFAAITSDAAVLTQASNTLCYSMQSVVVVFFVAGYVAYLSFAAFVLSVVIV
                     AMAGAIFHFRGKRLTAERSRAAEQERRLFDRLTDFLDGFKEVRLNASRSADLFNDSVA
                     VSRVAANIKIGAQVETFRQIVSTQSYMYILLGAVVFVAPIFSSSFAGESITQTTTALL
                     FVVGAAFGLVQSIPILSNANAAADRLEKLDSDLHAATSQERGQIQAASGFDRIEMRGI
                     EFSYKDRFSETAFRIGPIDFTVQSGELVFITGGNGSGKSTFMRVLAGLYPPASGTTTL
                     DGMRITAATRNQYRALISTVFTDYHLFHRLYGISDPDPAEVDRLLRQFRLIDKTDMSG
                     GEFRTLDLSDGQRKRLALIVALLEKRPILLLDEWTADQDPEFRRKFYHELLPQLVRGG
                     ATVVAITHDERYLDELTVPARRIRMDEGRIAEEQRLGPGSPSTENG"
     gene            complement(5237..5851)
                     /locus_tag="VNY79_01965"
     CDS             complement(5237..5851)
                     /locus_tag="VNY79_01965"
                     /inference="COORDINATES: protein motif:HMM:NF016983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF697 domain-containing protein"
                     /protein_id="HWX71245.1"
                     /translation="MAQKPTASGSSEKIEGVAAPGAITSEPVETENRDKVASKLVDRF
                     SIWAGVAGLIPVPVVDAVAVGGLQLQMLRRLSQIYDVPFSDNRGKALIASLAGAMIPA
                     TSGIGAASVLKAVPLVGTIVGGLVMPVLSAGATYAIGKAFIQHFASGGTLLDFNPPDY
                     RDFVKAQKEKWDSRSFRSGGASAEPSSSSSGRAAGATTGATTGS"
     gene            complement(6027..>7907)
                     /locus_tag="VNY79_01970"
     CDS             complement(6027..>7907)
                     /locus_tag="VNY79_01970"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HWX71246.1"
                     /translation="SARLDVLSTLPRFAPPGLEMLRMKSVYRYRKERHFAQPPEAIWP
                     FVADSARINEIAGMPAYKVEERADADGRIHRLASIKYGLLRVKWEEEFGEWQENRWLT
                     QTRHFINGPFGRFVASAEVHPEGTGSRMVFSAEFECLGVLGLLAKLSGQIGREGDKRL
                     GAIERMIRESETPDHLAGATAREAAKPAACRRLGTLIADLAGDPASHGLAPKLAEFLL
                     HAPIVALRSIRPLSMARFWHATPEDTVELFLAAQRLGIMVMGWDLLCPRCRGAKARVE
                     HLHELPQAAHCSSCNIDYGRDFTRNVELTFHPEPWLRPLPEGELCLLGQGTTPHVKFQ
                     AEVAARARKSFAMALRPGPYRFRTVEVGGGADTEIGADGMIPEVTASGRDVALGPSGH
                     KDEIVVSNDTDRPLFFVVEDRNWARDALTGERVIAMPAFRRLCPEQLLRPGDDVEIGR
                     VAIVFTDLQGSTKLYDALGDATAFHLVRDHFAFLSERVERHNGLIVKTVGDAVMAAFH
                     DPADAVRAVLSIQDDVADFNRGRGDGGVILKLGLHLGSCIAVTAGGVLDYFGSAVNTA
                     SRLEHQCRGGEVIVSDAVLADSEAREALKGRMVTDDSATLRGLIEPVRFVRVGAAKAI
                     AA"
BASE COUNT         1371 a         2502 c         2660 g         1374 t
ORIGIN      
        1 gccatcgtcg ccacggggga atagatggcc gtaagtgtcg gcggtcagtt gcaccgtcga
       61 gtgtcccaaa cgctcgctga ccagcttcag cggtaattcg agcccgccgt cgacgcgacg
      121 gttgatgcac cacgaggcgt agaagtggcg caggctatgc aggcccttgt atttcgcgcc
      181 gccatgctga tcgacgacgc cggcggcaat ctgcgccgga tggaagccgc acttaacgat
      241 cgagttgcgg tgctcgatgc cgccgcggat gttggggaag acaaggccga gcgcgcttcg
      301 agctgaggca agccggtgct cacgcaatgc ggcgacgacc atcggcggca gcggcaccgt
      361 gcgctcgctc gcctccgact tcggccgtcc gatcgcgccg tagcgatcgg cgcgctggcg
      421 gacgtggagc tcgccgcgct tcaggtcgac atcgtcccat cgcaagccgc gcagctcgga
      481 ggcgcgtagc ccagtgaaga tcgccgtcag cagcagcacc cggtagcgcc cggttgtggg
      541 attgagcttg ccgacgatcg cgcgcatctc ggcgggtgcc gggatatcga tgccggcatt
      601 gagtttgccg ttgccctcga cacggcgcga gcgttgtctc ttgcgcagtg agtagaccac
      661 gttctgtgcc acgaggccgc gctcctgcgc atcagcgagg atggcgccga gcgagcggcg
      721 ggcattccgc accatggccg gcgagcgtcc gtcctggcgc agccggtcct cgaagccgcg
      781 caccaggggc acggtcagct gcgagagcct gagcgtgccc aggattggcg cgatgtgcag
      841 atcagcgtgc tgccggtagg ccgcgatggt cgcccgctcc agcccggcgg cctcacagct
      901 ttcgagccat agctcggcgg ccttggtgac ggtgacgctc ttgctgtcag cggtgtgcac
      961 tccggcgcgg acggcggtcc cgacgatggc gtggtgggcg tcggcatcgc gcttcttggc
     1021 gaaggtcttg aggtggcggt cgccgtgctg gtcgacgtag tcgacgaccc aagcctcctt
     1081 cggctcgcct gtgggacttt tccaagtgcg cttgcggacg gacatttcta atctccacca
     1141 aagaatgcta atgtctccca acaagtacga atgcgggagc gcgacaggaa cgtgacatag
     1201 agcagttttt ttcaatgaaa tcaatggata aatgcttatg tcaaatccgc tccactagcg
     1261 catgtccgcc atctcgcagg ccgcgtagac gacggccttg aacatgtcaa aggagttgag
     1321 gttgacttgg cagaccgtgg atgagtcggg cgtaatgcgc agcttgtcgc ccgcggccat
     1381 cgcctgctgc ttgccgttga tgttgagggt gatcttttcg ttcgtgggcg gaccgatcaa
     1441 gcctatggtc agatgaccgt cggcgacgac gagcgactgg ttgggattga tgtgataggt
     1501 attctccgaa ggcgtgatcg catccagcgc cgcgtgcgtg ttcgtcagct tggcctgcag
     1561 cgcagcgagc tgtgcgagct gatcgttgta tctggtctca agcttttcgc cttcactgcg
     1621 cagcagctga atggtggtgt cgcgctcggc gaggtcgctg gcagcgagcc gccggccgta
     1681 catgtggccg ccgatcgcga cgccgagtgc gaggagcaca agcaggacaa tcagccgaag
     1741 gctgccgctg ggtccgaaca aggcgccgaa cagtcgagga aacatcctga ccgcgcgcgg
     1801 gcgagccgat gcgggcctgt tgctcacttt gcgatcccct ccgaatggtc ccgttgggct
     1861 ggagcgctgt cgcttcaaca ccaagcaata gcgctctagt gtttcgattc ttctcccggc
     1921 gttgccggcg gcggcgccga tccgtgcaaa gcgccgttaa tccgcgaaag tatcgattcg
     1981 gcggcggaag cttcgctgcg gctcggtgcg gccggcgccg ccggcgcacc ggaaggcgtt
     2041 gcggcggccg aaggctgcgc tgcctgaatc ttgtcggaag ccggcggcat gctgacgttc
     2101 gatgatttgg ccggcggcgc cgcttcgctc gagccgccgg gcggactgcc cggggccgat
     2161 tcggtcgggg cggccggcgc cgccggcggc ggcgtgccgt tcgcgccgga cggcggcgtc
     2221 actcccggcg ccgcagtctc ggcgttgagg atgatcggca ggccgtcctt gcccgcgccg
     2281 atgatgatga tcttcgaatt ctgcgactgc gccagcatca gagtggcctc gatgccgcgc
     2341 cagcgcagat aggaatccga aatgcccttg ctgaccgtct gctggaacgc ggcgatgcca
     2401 ttggcctcga tctgcttgcg cttcgactcc tcggcttcgc gcgcgacgcg gaatctgtac
     2461 tcctggatga ggtaaaactg ctcggtctgc cgattgatgg cgttgacgat cgctggaggc
     2521 agctcgatgc tgagcacgag cgtgtcgagg atctggatcg ccccttgcag aaagtcgttg
     2581 tagtgcttgg ggtccggctg ctccatggcc tcaggttgca ccagcttgtt gagattgctg
     2641 cccaggctct tctgcgtact gctgcggacc tgatcctgga tggcgtcgcg cgaggtgtag
     2701 acctcctcgg ccgtgtattt ggaaatgact tcgcgagcct ggctgccgat ctcggggccg
     2761 acgaccgtgt ccaggtattt tgggccgatg aacttgtgca gcacggcgac ggagcggtgc
     2821 gccagctgat acctgatgtt catctgcgcg gtcacgttca cgccgtcctt ggagatggcg
     2881 ttgatcgact gggaagatga ttgcagccgc agatcgtaga tgaagagcct gtcccacggc
     2941 gcgatgatgt gcagtccttc ctcgcgcagc tcccgcggat cgagcagggt gccgcggccg
     3001 acaaagcacc agcaatagat gtcgaagccg ttgaagcgct tccaaaggac gccgacgcgg
     3061 ccgctcggca ccgtgatcac cacgttgggc cacagcacga cgatcatcag caaggccaag
     3121 agaagcgagg tggtcacggc cggcaggtgg cgccagacga agctccgcca gccgcgcttc
     3181 ggcgccggcg gctcctcatc gagcaggtca tcgtacctgg ccatcagccg ttctccgtcg
     3241 aaggcgatcc tgggcctaac cgctgctctt cggcaatacg gccttcatcc atgcgaatcc
     3301 ggcgtgcggg caccgtcagc tcgtcgagat agcgctcatc atgggtgatc gccacgacgg
     3361 tggcgccgcc tcgcaccagt tgcggcaaca gttcgtggta gaatttgcgg cgaaattccg
     3421 ggtcctggtc ggccgtccac tcgtccaaca acaaaatcgg ccgcttttcc agcagcgcga
     3481 cgatgagcgc gaggcgtttg cgctggccgt cggaaagatc gagggtgcga aattcgccgc
     3541 cggacatgtc ggtcttgtcg atcaggcgga attgccgcag caggcggtcg acctcggccg
     3601 gatcgggatc ggaaatcccg tagagccggt gaaagaggtg atagtcggtg aacacggtcg
     3661 agatcagcgc gcggtactgg ttgcgcgtag ccgctgtgat gcgcatgccg tcgagcgtag
     3721 tcgtgccgga ggccggggga tagagtccgg cgagcacccg catgaaggtc gacttccccg
     3781 acccgttgcc gccggtgatg aagacgagct cgccggattg cacggtgaag tcgatcggtc
     3841 cgattctgaa ggcggtttcg gagaaccggt ccttgtaact gaactcgatc ccgcgcatct
     3901 cgatgcggtc gaacccgctc gccgcctgga tctggccacg ttcctgcgag gtcgcggcat
     3961 gaagatcgga atcgagcttt tccagccgat cggccgccgc atttgcgttc gacaaaatcg
     4021 ggatcgattg caccaggccg aatgctgccc cgaccacgaa cagcagcgcc gtcgtggtct
     4081 gggtgatcga ctccccagcg aatgatgagc tgaaaatcgg agccacgaac acgacggcgc
     4141 cgagcaggat gtacatgtag ctctgggtcg atacgatctg acggaaggtt tcgacctggg
     4201 cgccgatctt gatattggcc gcgacccgcg acacggcgac ggagtcgtta aacaggtcgg
     4261 cgctgcgcga ggcgttgagc cgcacctcct tgaagccgtc gaggaagtcg gtcaggcgat
     4321 cgaacagccg gcgctcctgc tctgccgccc ggctccgctc cgcggtcagg cgtttgccgc
     4381 ggaaatggaa tatcgcgccc gccatggcaa cgatgaccac gctcaagacg aacgcggcaa
     4441 acgacagata cgcgacatag ccggcgacaa agaagacgac gacaacgctc tgcatcgaat
     4501 agcagagcgt gttgctcgcc tgcgtcagca ctgcggcgtc gctcgttatg gcggcgaaga
     4561 tgcgcgagcg cccgagcgct tcgatcgcca gcagctccgc gtgccgcaca tcgtccatga
     4621 ggcgcacgcg cagccggtgg atgatggcct cgatctcggc ggtgaccgtg gtagtcacgt
     4681 acgtctgggt cttgatgaac agaaacagcg agatcaggaa cagcgcgacc gcccagaggc
     4741 tcggcttgtg gctcgtgtcg gcggaatgcg cgccggcgtt gatggcggcg aggatcgcgg
     4801 cgctgctgat gccgccgatg ccggacatga acaccagctt ccgcagtgag ccgcgcattc
     4861 cgcggcgaac gagctgcaag aaggacattg gtgtgatgtc gtccgtctaa aggtccacaa
     4921 ggcgccgccg ccggttcagc gaggcaacgc ttgccgaggc agaggcgaga accggtctag
     4981 tcccgcgcgc gccgttcgat gcggcgcgac ggcccggtgc gaggcggcac gggcattggc
     5041 agcatagcgg acgcgagcgc aagcagaatg gttacgggaa gatagcgagg acggtcggcg
     5101 cggcgaactc cgatcaggcc acagccgccg gcatgcacga ttgctgcgac cgtgccgcgc
     5161 ggcctcctcg atcaacgctg gtcgcgcgtc ggctcctgga accgcccccc cgttcgctgg
     5221 catgctcccc cgcgtatcaa gaaccggtcg tcgccccggt ggtcgcacca gcagcgcgcc
     5281 cggaggagct ggacgaaggc tcggcgcttg cgccgccgga ccggaacgat cgcgaatccc
     5341 acttctcctt ctgggccttc acgaagtcgc ggtagtccgg aggattgaaa tcaagcaggg
     5401 tgccgcccga ggcgaagtgc tggatgaagg ccttgccgat cgcgtaggtg gcgccggccg
     5461 agagtaccgg catcacgagt ccgccgacga tcgtgccgac caatgggacg gccttgagca
     5521 cgctcgcggc gccgatgccg ctggtcgcag ggatcatcgc tccggcgagc gaggcgatca
     5581 gagccttgcc gcggttgtcg gaaaacggca cgtcgtagat ctgggaaagg cggcgcagca
     5641 tctggagctg gagtccgccg acggcgacgg catcaacaac aggcaccggg atcaaaccgg
     5701 cgacgccggc ccagatggag aaacggtcta cgagcttcga ggccaccttg tcgcgattct
     5761 cggtctcgac cggctccgac gtgatcgcgc ccggagccgc cacgccttcg atcttctcag
     5821 aactcccgga cgcagtcggt ttctgtgcca tagcggatcc tttctcgttt ctggggctgg
     5881 gcccacccct cggtcgtgcc gtggcgaact cgttcgccgg ctccatccac gtgagctcaa
     5941 aaaaagccta tcatggcggg tcaggcgtgc caagcactgg cggcagcggg ctcgcgcgga
     6001 tttgcgcgac gcgtgttgat catccgttaa gcagcgatag ccttggccgc gccgacccgc
     6061 acgaagcgga ccggctcgat gagcccgcga agcgtcgcgc tgtcatcggt caccatgcgc
     6121 cccttgagcg cctcgcgcgc ttcgctgtcg gcgagcaccg cgtccgagac gatcacctcg
     6181 ccgccgcggc attggtgctc cagacgcgag gcggtgttga ccgccgaccc gaaataatcg
     6241 agcacgccgc cggcggtgac cgcgatgcag gagccgaggt gcagcccgag cttgaggatg
     6301 acaccgccgt cgccgcggcc gcggttgaag tcggctacat cgtcctgaat cgacagcacg
     6361 gcccgcaccg catcggccgg gtcgtggaac gccgccatca ccgcatcgcc cacggtcttg
     6421 acgatcaacc cgttgtggcg ctccacccgc tccgacagaa aggcgaagtg atcgcgcacc
     6481 agatggaaag cggtggcatc gccgagggcg tcgtagagct tggtcgagcc ttgcagatcg
     6541 gtgaacacga tcgctacgcg gccgatctcg acatcgtcgc cgggccgcaa cagctgctcc
     6601 ggacagagcc gccggaacgc gggcatggcg atcacgcgct cgccggtcag ggcgtcgcgc
     6661 gcccagttgc gatcctcgac aacgaagaac agcggccggt cggtgtcgtt gctgacgacg
     6721 atttcgtcct tgtggccgga tggccccaac gcaacatcgc gaccgctcgc ggtgacctcg
     6781 gggatcatcc cgtcggcgcc gatctcggta tcggcgccgc cgccgacctc gaccgtgcgg
     6841 aagcggtaag ggcccggccg caacgccatc gcgaagctct tgcgcgcacg cgcggcgact
     6901 tccgcctgga atttgacgtg cggcgtcgtg ccctgcccca gcaggcacag ctcgccttcc
     6961 ggcagcgggc gcagccacgg ttcgggatgg aaggtcagct ccacgttgcg ggtgaaatcg
     7021 cgcccgtagt cgatattgca ggatgagcaa tgcgcggctt gcggcagctc gtgcaggtgc
     7081 tcgacccgcg ccttggcccc gcggcagcgc gggcacagca aatcccagcc catgaccatg
     7141 atgccgaggc gttgcgcggc gaggaacagc tcgacagtgt cctccggcgt cgcgtgccaa
     7201 aatcgcgcca tcgacagcgg gcgaatgctg cgcaaggcca cgatcggcgc atgcagcaga
     7261 aactcggcaa gcttgggcgc aaggccgtgg ctcgccggat cgccagcaag gtcggcgatc
     7321 agcgttccga ggcggcggca cgcggccggt tttgcggctt cacgcgcggt ggcgccggca
     7381 agatggtccg gcgtttccga ctcgcggatc atccgctcga tggcgccgag gcgtttgtcg
     7441 ccttcgcgcc cgatctgccc ggacaacttc gccaacaatc ccaacacgcc gaggcattcg
     7501 aactcggcgg agaagaccat ccggcttccg gtgccctccg gatgaacctc ggcggaagcg
     7561 acgaagcggc cgaacgggcc gttgatgaaa tggcgggtct gcgtcagcca gcggttctcc
     7621 tgccactcgc cgaactcctc ctcccatttc acccgcaaca gaccgtattt gatgctggcg
     7681 aggcggtgga tgcggccgtc agcatcggcg cgctcttcga ccttgtacgc cggcatgccg
     7741 gcgatctcgt tgatgcgcgc gctgtccgcg acaaagggcc agatcgcctc cggcggctgg
     7801 gcgaagtgcc gttccttgcg gtagcgatag acactcttca tgcgcagcat ttccagaccg
     7861 ggcggtgcga atctcggcaa cgtagaaagt acgtcaagcc gggctga
//
LOCUS       DATMQB010000056         6344 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3113969, whole genome shotgun sequence.
ACCESSION   DATMQB010000056 DATMQB010000000
VERSION     DATMQB010000056.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6344)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6344)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6344
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3113969"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            221..586
                     /locus_tag="VNY79_01975"
     CDS             221..586
                     /locus_tag="VNY79_01975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71247.1"
                     /translation="MNGPPTDAQTKALEFVNSASTYLLIATLALLAWVASAVEFSNQG
                     FRFASMGCFALSAVFGVATLALVPLIQEARRPGQSNFAVDAPFALFGRRSARLKAVLL
                     PQHVLLVAGVVLYVLGMID"
     gene            680..1300
                     /locus_tag="VNY79_01980"
     CDS             680..1300
                     /locus_tag="VNY79_01980"
                     /inference="COORDINATES: protein motif:HMM:NF020771.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CerR family C-terminal domain-containing
                     protein"
                     /protein_id="HWX71248.1"
                     /translation="MTRPSEITRERVMKAAERLFAERGYEGTSVRAIVAKARVNQAAI
                     NYHFAGKEGLYREVLRTAFRALTAHHLAHAEEGKAASREAALGAFVRRQLRPLTARDE
                     FSRHLRIFNWEAAQPTAVFRKLMSEEAAPFMSLAVDLVRRFLPEADQRTLSAAAIWLV
                     GQCSIFVRNREQLAAPPLNLALDEPAVERLAELVSRWAIGGLIQPA"
     gene            1444..2124
                     /locus_tag="VNY79_01985"
     CDS             1444..2124
                     /locus_tag="VNY79_01985"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71249.1"
                     /translation="MPHDGPLLLRFFTKLLFDIMPAALASIIGGILFTHYQMGYAGAP
                     TPAVEQAVPASAEMIQLLRDEHAAIVDFLKAQTAAEKSRLAAEDEASARSVAEARMAA
                     ASSAAVPAAAPVTASRRPETTVMAAKSAVSRGRATAAATAAAPHAPAVIAQAEQSGGS
                     ASAAPAAGKSDSLLAKTLDFKDRVVDATIHVIGTLGSIPSLIASGGDRVGASNANAPA
                     GRLVGASS"
     gene            2262..2684
                     /locus_tag="VNY79_01990"
     CDS             2262..2684
                     /locus_tag="VNY79_01990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71250.1"
                     /translation="MCDYSLHHVASRPATVGDKLLTSKFFNTPTGGFAAVDDVNVAVC
                     LLPGTEIAFEQDVECEPALGIFPGRKLGQRLARFRQINMDQPCVHHDALEFPDGKIVL
                     VTRLCEGQRATVLQMPAAARSPRPASEAAAERPLSFVE"
     gene            2938..3708
                     /locus_tag="VNY79_01995"
     CDS             2938..3708
                     /locus_tag="VNY79_01995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71251.1"
                     /translation="MRYAGNFHQEWGYLAPAPSFIRTARVILVAAAVGATAGAGVVFS
                     LVGREDTETSVAARTLARPAEAASAQLNVLPPAPAALASGAQDHAPRSLAADAPRAGA
                     ADSESKPSSTTMAPAGIAALAEVPAVTEDASPHPATSPSAAVPSPVAAPARLGVSSPP
                     ASAPSAAAGVPAKAAVSPAAATGAPAVEGAPAQQKVVAAKKRIAPRFASRAGSSRIAP
                     GEYYMSADNYENWGRGGYSRANGWNGGYSQSGGRFQSW"
     gene            complement(3772..4005)
                     /locus_tag="VNY79_02000"
     CDS             complement(3772..4005)
                     /locus_tag="VNY79_02000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71252.1"
                     /translation="MKRLAFAVGVLALGFAASTPARADYALVKFESGYCRIWWDSAGN
                     PFGVAWIKVAVGLPDYEAAVLALNMAVGQGVCR"
     gene            complement(4192..4434)
                     /locus_tag="VNY79_02005"
     CDS             complement(4192..4434)
                     /locus_tag="VNY79_02005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71253.1"
                     /translation="MKRLVFAVGVLVLGAAALTPARADFAVIRFKDGHCQAWMDSKMG
                     PWSPGSKYLTVGLKSWDVAAMHGKWAMKHHRCKAWS"
     gene            4567..4761
                     /locus_tag="VNY79_02010"
     CDS             4567..4761
                     /locus_tag="VNY79_02010"
                     /EC_number="5.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016862 - intramolecular oxidoreductase
                     activity, interconverting keto- and enol-groups [Evidence
                     IEA];
                     GO_process: GO:0006725 - cellular aromatic compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxymuconate tautomerase"
                     /protein_id="HWX71254.1"
                     /translation="MPEVVVYMLEGRTLEQKRGLVKDITAAVVKNAAVPPETVSVSLV
                     EMPKHAKGKGGVLFSEMPPR"
     gene            4953..5270
                     /locus_tag="VNY79_02015"
     CDS             4953..5270
                     /locus_tag="VNY79_02015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71255.1"
                     /translation="MSDIWETKDGRRRVRRDPPTIEEAVTAAQGLTEELRERIEIVAS
                     LMEVPLEEARSAVLRMGQSKDINRVTITAGHSGRTGATRAVVVERRTPRHAVLQRRSG
                     SQA"
     gene            complement(5288..5569)
                     /locus_tag="VNY79_02020"
     CDS             complement(5288..5569)
                     /locus_tag="VNY79_02020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HWX71256.1"
                     /translation="MHILWIIIIGFVAGIIARLLAPGPNNPAGFILTTLLGIAGAFIA
                     TLIGQTIGWYSPNQGAGLLGAVVGAVVVLFIWHRLVTNRSIPDPGRRWL"
     gene            5746..6051
                     /gene="clpS"
                     /locus_tag="VNY79_02025"
     CDS             5746..6051
                     /gene="clpS"
                     /locus_tag="VNY79_02025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HWX71257.1"
                     /translation="MSKTLVKPRTKVKAKTQKPPLYKVILLNDDYTPREFVVLVLKAV
                     FRMNADQAYRVMMTAHQKGACVIAVYVKDVAETKAKEGTELGKQNGYPLFFTTEPEE"
     gene            complement(6101..>6344)
                     /locus_tag="VNY79_02030"
     CDS             complement(6101..>6344)
                     /locus_tag="VNY79_02030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71258.1"
                     /translation="AVLETSTMDQRDQELLDKQMRAISPAPRRDGVVIVTVLMVFLAG
                     MTLGGMLAGSASEPTRVAMNDTVPVAPDGLPLTVRQ"
BASE COUNT         1126 a         2061 c         2086 g         1071 t
ORIGIN      
        1 gcgaatcgtg tcgggcatct tgccgccggc gtcggcgatc atgccgtcgg cagagatgat
       61 ggcgtaacct tcgatgcgat ttgacccgat catggagaaa cgatagcggg ccgcgcgcgc
      121 cgagtcattg cggcaaggcg gctgccgcct taatgctggt attgtcctcc gcgtcgctgc
      181 cgaaccgacg acctaactca gcctcctcga gatccgccgc atgaatggcc caccgaccga
      241 tgcgcagacc aaggcgctcg aattcgtgaa cagtgccagc acctatctcc tgattgccac
      301 cctggcgctg ctcgcgtggg tggcgtccgc ggtggagttc tccaaccaag gcttccggtt
      361 tgcttcgatg gggtgcttcg cgctgtcggc cgttttcggc gtcgccacgc tcgcgctcgt
      421 tccgctcatt caggaggccc gccgcccggg gcagtcgaat ttcgccgtcg atgccccctt
      481 tgcgctgttc ggccggcgca gcgcccggct caaggcggtg ctgctgccgc agcacgtgct
      541 cctcgtcgcc ggcgtcgtcc tctacgtcct gggcatgatc gattgaaata ccgcggcgcg
      601 atgccgccgc atcgggcgat tgcgccggcg gcgcagaacg cctattttgg atttcaaacg
      661 ggagtttgaa attcgtgcga tgacccggcc ctccgagatt acccgcgagc gcgtcatgaa
      721 agcggccgaa cggttgttcg ccgagcgcgg ctacgaaggc accagcgtcc gcgccatcgt
      781 cgccaaggca cgggtcaacc aggcggccat caactaccac ttcgccggca aggaaggact
      841 ctaccgcgag gttctgcgca cggcgttccg tgccttgacc gcgcatcacc tcgcccatgc
      901 cgaagagggg aaggccgcct cgcgcgaagc ggcgctcggc gccttcgtcc gccgccaact
      961 gcggccgctc acggcgcgcg acgagttcag ccgccacctg cggattttta actgggaggc
     1021 ggcgcagccc acggcggtct ttcgcaagct catgagcgag gaggcggcac cgttcatgag
     1081 tctcgccgtc gatctcgtgc gccgcttcct gcccgaggcc gaccagcgca cgctctccgc
     1141 tgcggcgatc tggcttgtcg gccaatgcag catattcgtg cgcaatcgcg agcagctggc
     1201 ggcgccgccg ctcaatctgg cgctcgatga acctgcggtc gagcgattgg ccgaactggt
     1261 cagccgctgg gcgatcggcg gcctgatcca gccggcgtaa gcgccgacgc ccacaaaatc
     1321 cccgcgggtt gccgcaaaga ttccttgttc cgggccggcg cgcgcccaga acgcgtgttt
     1381 gaaattcaat cggccgtttg aaaaatacgg gcgccgacgg gtgccccgga gggggactgg
     1441 gtcatgccac acgatgggcc gttgctgttg cggtttttca ccaagcttct gttcgatatc
     1501 atgccggccg ccttagccag catcatcggc gggattttgt tcacccacta ccagatgggc
     1561 tatgccggcg cgcccacgcc ggccgtagag caggccgtgc cggcctctgc ggaaatgatc
     1621 cagcttcttc gcgacgagca cgccgcgatc gtcgatttcc tcaaggcgca gaccgcggcg
     1681 gaaaagagcc gcctcgcggc cgaggacgaa gcgtcggcgc gcagcgtggc cgaagcccgg
     1741 atggcggctg cgtcgtccgc ggcggtaccc gccgccgcgc cggttacggc gtcacggcga
     1801 ccggaaacga cggtgatggc ggcaaagtct gccgtgagcc ggggcagggc gacagcggcg
     1861 gcgactgcgg ccgccccgca cgcgccggcg gtgatcgcgc aggcggagca gagcggcggc
     1921 agcgcgtccg ctgcgccggc cgccggcaag tccgactcgc ttctcgccaa gaccctcgat
     1981 ttcaaggacc gcgtcgtcga tgctacgatc cacgtgatcg gcacgctcgg cagcatcccg
     2041 tccttgattg cgtcgggcgg cgaccgcgtc ggtgcctcca atgccaacgc gccggctggc
     2101 cgcctggtcg gcgcatcctc atgactgctt cgtgtagcag gctgtcgaac ttgtgaatga
     2161 atcggggcgg ccggcgacaa aagatcgcca ccgaaagctg ctccactctt tgcgcagaag
     2221 gacaaccatc ctggctgttc acagcgacga ggagttcttc tatgtgcgac tacagcctgc
     2281 atcatgtcgc cagccgcccc gccacggtcg gggacaagct cctgaccagc aaattcttca
     2341 atacgccgac gggcggcttc gcggccgtgg acgatgtcaa cgttgcggtc tgcctgctgc
     2401 cgggcaccga gatcgcgttc gagcaggacg tcgaatgcga gccggcgctg ggcatctttc
     2461 cgggccgcaa gctcggacag cggctggcgc gattccgcca gatcaacatg gaccagccct
     2521 gcgtgcatca cgatgcgctc gaattccccg acggcaaaat cgtgctggtg acgcgattgt
     2581 gcgagggaca acgcgcgacg gtgctgcaaa tgccggcggc tgcgcgcagc ccgcggcctg
     2641 cgtccgaggc ggcggccgaa cgcccgctgt cgttcgtcga gtagcgcgct tcgtccgcgg
     2701 ctcgccggcg actttgggtt aacgccggct tacgagcgtt ccgttttggc ggaggaaatc
     2761 ggcaaaaagc gccgaactgc gcgctttgtc cgctttcctt taacgcccgg gcaagtcccg
     2821 gcgggcgatc catattttgt cgcggcagga actcgcttcg cgttcgaagc gttcaatggt
     2881 cggcggctgt aagcgtgggg tgggcggttc tttctccttg tctcggaggc cacaacaatg
     2941 cgctacgccg gcaactttca tcaggaatgg ggctatctgg cccccgcgcc gagcttcatt
     3001 cgcaccgcgc gcgtcattct ggtcgcggct gccgtcggcg cgacggccgg cgccggcgtg
     3061 gttttttcgc tggtcggccg cgaggacacg gaaacctcgg tcgcggcgcg cacgctggcg
     3121 cgaccggccg aagccgcgtc ggcgcaactc aatgtgctgc cgccagctcc cgctgcgtta
     3181 gcgtcggggg cgcaggatca cgctccgagg tcgcttgccg ccgacgcacc gcgcgccggt
     3241 gccgcggaca gcgagtccaa gcccagttcg accacaatgg cgccggccgg cattgcggct
     3301 ttggccgagg tgccggcggt gactgaagac gcgtctcctc atccggcgac atcgccgtcc
     3361 gcggcagtgc cgtcgcctgt cgccgcaccg gccagactcg gggtctcgtc gccgcccgct
     3421 tcggctccat cagcggcagc cggggtgccg gcaaaggctg ccgtttcgcc ggccgccgcc
     3481 actggcgcgc ccgcagtcga aggggcgccc gcgcaacaga aggtcgttgc cgccaagaag
     3541 cgcattgccc cacgtttcgc ttcgcgggcc ggttcgtcga gaattgcgcc cggcgaatat
     3601 tacatgagtg ccgacaacta cgagaactgg gggcgcggcg gctattctcg tgcgaatgga
     3661 tggaacggcg gctactcaca gagcggcgga cgttttcaga gttggtgaac cttggcgcct
     3721 tcgcccgccg gaccgtcagc aggcggaggc acgcacggat cgctcgaccc gttacctgca
     3781 gactccttgg ccgacagcca tgttgagagc caaaacggcg gcctcgtagt cgggcaagcc
     3841 gacggccacc ttgatccagg ccacgccaaa cgggttgccg gcgctatccc accagatccg
     3901 gcaatagccc gactcgaatt tgaccagcgc ataatcggcg cgtgccggag ttgaggcggc
     3961 gaagccaagc gccagcacgc caaccgcaaa tgccaatcgc ttcatcgtct gctccttgtt
     4021 tccggaggaa gttcccggat agaccgggcg cgacgatgaa gcaagcccgt ccgttcgtca
     4081 cgctgcgggg gcgtggcgtg cggtgggtgg caccgacgat gagcgcgaaa agattgagcg
     4141 cggccgcccg gaacgccggc ggccgccagg agcagcgaag caggcgctag attacgacca
     4201 ggccttgcag cggtggtgct tcattgccca cttgccgtgc atcgcggcaa cgtcccagct
     4261 cttcaggccg accgtcagat acttggagcc gggagaccaa ggccccatct tgctgtccat
     4321 ccacgcctgg cagtggccgt ccttgaatcg gatcaccgcg aagtcggcgc gtgccggagt
     4381 caaagcggcc gcgccgagca ccagcacgcc aactgcgaag accaaccgtt tcattgtcag
     4441 ctccccattt gataggtatt tccacgagtt ttccgatagt acgggggtac gcacgaggca
     4501 agtccgcgcc ggcctaccgc aaaaagttcc agggagtgag gctgtcgtgc aacaacggag
     4561 gacgtgatgc cggaagtcgt cgtctatatg ctggaaggcc gtacgctcga acagaagcgc
     4621 gggctcgtga aggacattac cgctgcggtg gtgaagaacg cggcagtgcc gcctgagact
     4681 gtgtcggtct ctctggtcga gatgccgaag cacgcgaagg gcaagggcgg cgtcctgttc
     4741 agcgagatgc cgccacgtta gcggaccgcc gtaactgcct gtacggtcta cgaaagatcg
     4801 tggcgttcag caggcagttt accttgtgaa tttctcgtga gtgcggcgca caacgccttg
     4861 ctgcaatgcg gcagagggca gataattgcc gttcggacgg ccttcgacgg ggcaacctgc
     4921 caaggccgac caatggcaat gaaggtgcgg acatgagcga catatgggag acaaaggacg
     4981 gtcggcggcg cgtgcgacgc gatccgccga ccatcgagga ggcggtaacc gcggcgcagg
     5041 ggctcaccga agagctcagg gagaggatcg aaatcgtggc ctcgctaatg gaagtgccgc
     5101 tcgaggaggc gcgatcggcc gtgctgcgca tgggccagag caaggacata aaccgggtaa
     5161 cgatcaccgc tgggcatagc gggcgcaccg gcgccacccg cgctgtcgtg gtcgagcgcc
     5221 gcacgccgcg ccatgccgtg ttgcagcgcc gatcgggcag tcaggcctag cactctgccg
     5281 acgcctgcta gagccagcgg cggcctggat cgggaatcga acggttcgtc accaaccggt
     5341 gccagatgaa gagtacgacc accgcgccga cgacggcgcc gaggaggcct gcgccctggt
     5401 tcgggctata ccagccgatg gtctgcccga tcagggtcgc gatgaacgcg ccggcgatgc
     5461 caaggagtgt cgtgaggata aagcccgccg ggttgttcgg tccgggcgcc agtaagcgcg
     5521 caatgatgcc ggccacaaaa ccgatgatga tgatccacag gatgtgcatg gtgaactccg
     5581 tgcgaggcga ttgacacagc aaacacgacg cagttccgcc gtcgatcatc gcttgcctcg
     5641 ccccggggaa caaggggtcg cagcgcgaac ttggttagtg ctgggagaag gccgccgcgc
     5701 gaactataat ttgccattcg cgaccgccgg gcgcggagcg ccgcaatgag caaaacactc
     5761 gtcaagccac ggaccaaggt caaggcgaaa acgcagaagc cgccgctcta caaggtcatt
     5821 ctgctcaacg acgactacac gccacgcgaa ttcgtcgtgc tggtgctcaa ggcggtgttc
     5881 cgcatgaatg ccgaccaggc ctaccgcgtg atgatgacgg cacatcagaa aggcgcctgt
     5941 gtcattgcgg tctacgtcaa ggacgtcgcc gagaccaagg ccaaggaagg caccgaattg
     6001 ggtaagcaga acggttaccc gctgttcttc acgaccgagc cggaagaata gcgtggcacc
     6061 acggcacttt tccggttgca ggctgtcttc actcttcggg ctactgccgc acggtcagcg
     6121 gcaggccgtc cggagcgacc ggcacggtgt cgttcatcgc cacgcgcgtc ggctcgctcg
     6181 ctgaaccggc gagcatgccg cccagggtca taccggcaag aaataccatc aggacggtta
     6241 caataaccac gccgtcgcgc cgcggggcgg gactgattgc ccgcatttgc ttgtctaaaa
     6301 gttcctggtc gcgctggtcc atcgtagaag tctccagcac tgca
//
LOCUS       DATMQB010000057         2404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_943816, whole genome shotgun sequence.
ACCESSION   DATMQB010000057 DATMQB010000000
VERSION     DATMQB010000057.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2404
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_943816"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            420..1820
                     /locus_tag="VNY79_02035"
     CDS             420..1820
                     /locus_tag="VNY79_02035"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: protein motif:HMM:NF006696.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004514 - nicotinate-nucleotide
                     diphosphorylase (carboxylating) activity [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HWX71259.1"
                     /translation="MNTERASALLTDLYQINMMQAYLDHGETKTAVFEFFVRSLPARR
                     GFLLAAGLEQALDYLENLRFSAAELEWLETTARFGRNLLDYLREFRFTGDVHAVPEGT
                     VFFANEPILRVTAPLPQAQLVESRLINILHFQSLIASKAARVVLAGPGKILVDFGFRR
                     GHGAEAGLMAARASYVAGFAGTATVLAGKDFGIPLYGTMAHSFIETFDDESAAFAAFA
                     RSRPDNLVLLLDTYDSEAAARKVVALAPRLKAAGIAIRGVRLDSGDLVALSRSVRGIL
                     DAGGLADVTIFASGGLDEDAIAEFVRVQAPIDGFGVGTTLTTSSDAPVLDCVYKLQEY
                     AGAPRRKRSANKATWPGRKQVWRRYGADGRMAGDRLTLDTAAAPRPGAGSSVPKRGDT
                     PLIELVMQNGRRLRLPPSLDAIRQNAKRELERLPEPLRRLEPGATYAVEVADELKELA
                     AQVDRRLEMQAARSRS"
     gene            1865..>2404
                     /gene="pncA"
                     /locus_tag="VNY79_02040"
     CDS             1865..>2404
                     /gene="pncA"
                     /locus_tag="VNY79_02040"
                     /EC_number="3.5.1.-"
                     /EC_number="3.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional nicotinamidase/pyrazinamidase"
                     /protein_id="HWX71260.1"
                     /translation="MSEAATIDGNDVLIVVDVQKDFCPGGALAVPRGDEIVPIVNRLA
                     ARFHSVVLTQDWHPSGHFSFASTHRGKNPFETVAAPYGPQVLWPDHCVQGTPGAAFHP
                     ALQIPHAALVLRKGMERMIDSYSAFYENDHKTPTGLVGYLHERGVSRVFLAGLAFDFC
                     VRYSAEDARREGFTVFVIED"
BASE COUNT          406 a          807 c          775 g          416 t
ORIGIN      
        1 gcgtcgggca ccctgatgtg atcggcgtga gccggatcga agtggattat agacgcatcg
       61 acgccgtagc cgccgccgcc ttctgcggac gcgtaagcca ttgcacgctc cccgccacgc
      121 ccctcatcga gcgtgaacga ctaaacccac ccccttgcag gcttgcgcgc cgccaccttc
      181 tttgtagtcc cccagtggcc ggcgaacagc gctacatagc tccaattcgg ggggaggggc
      241 aagttaaact cgcaataaaa agtgattgaa ctcgggggtt tacgcggaca cccggttccg
      301 tgtttgccga gagcggcggg aaccggtgga accccgcccg cgggaacagg cgccagttgc
      361 cgccggcccg gtgccgtgcg ctattcgcag cggactccgg cccgaaccag ggacagccga
      421 tgaatacgga gcgcgcgagc gcattgctga ccgaccttta tcagatcaac atgatgcagg
      481 cctacctgga tcacggcgag acgaaaaccg ccgttttcga attcttcgtc cgcagcttgc
      541 ccgcccgccg cggctttctc cttgcggccg gcctcgagca ggcgctcgac tacctcgaaa
      601 accttcgctt ctcggcggcg gaactcgaat ggctcgagac caccgcccgg ttcggcagga
      661 atctgctcga ctacctgcgc gagtttcgct tcaccggcga tgtgcatgcg gtgcccgagg
      721 gcacggtttt ctttgccaat gagccgatcc tgcgggtgac cgcgccgctg ccgcaggcgc
      781 aactcgtcga atcccgcctc atcaacatcc tgcatttcca atcgctgatc gcgtcgaagg
      841 cggcacgcgt ggtgctggcc ggcccgggca agattctcgt cgatttcggg ttccgccggg
      901 gccacggtgc cgaggccggg ctcatggcgg cgcgggcgag ctacgtcgcc ggcttcgccg
      961 ggaccgccac cgtgctcgcc ggtaaagatt ttggcatccc gctctacggc accatggcgc
     1021 actccttcat cgagactttc gacgacgaga gcgcagcgtt tgccgcgttc gcgcggtcgc
     1081 gcccggacaa tctcgtgctg ctgctcgaca cctacgatag cgaggcggcc gcgcggaagg
     1141 tcgtggcgct ggcgccgcgg ctcaaggctg ccggaatagc gattcgcggc gttcgcctcg
     1201 acagcggcga cctcgtcgcg ctgtcgcgca gcgtccgcgg catcctcgac gctggcgggc
     1261 ttgcagacgt gacgatcttt gcgagcggcg gtctcgacga ggacgcgatc gcggagtttg
     1321 tccgggtgca ggcgccgatc gacgggttcg gcgtcggcac caccttgacg acctcctcgg
     1381 acgcgccggt gctcgattgc gtctacaagc ttcaggaata cgccggcgca ccacgtcgca
     1441 agcgctcggc gaacaaggcg acatggccgg gccgtaagca ggtgtggcgg cgttacggag
     1501 cggacggccg catggctggc gaccggctga cgctggatac cgccgcggct ccgcgccctg
     1561 gggctggctc gagcgtaccg aagaggggcg acactccgct catcgagctc gtgatgcaga
     1621 acggccgtcg cctgcggctg ccgccatcgc tcgatgccat caggcaaaac gccaagcgcg
     1681 agcttgaacg gctccccgag cccttgcgcc gcctcgagcc gggcgcgacc tatgcggtcg
     1741 aggtagccga cgaactcaag gagcttgcgg cgcaggtcga ccgccggctg gaaatgcagg
     1801 cggcacggtc gagatcgtga aaaaggagcg cgccaacgca ggtcgcgcac gacgtgagcc
     1861 cgaaatgagc gaagccgcga ccatcgacgg caacgacgtc ctcatcgtcg tcgacgtgca
     1921 gaaggatttt tgccccggcg gcgcgcttgc cgttccgcgc ggagacgaga tcgtgccgat
     1981 cgtcaaccgc ctcgccgcgc gattccacag tgtggtgctg acgcaggact ggcacccatc
     2041 cggccacttc tctttcgcgt ccacgcaccg gggaaaaaat cctttcgaga ccgtcgccgc
     2101 accctatggc ccgcaggtgt tgtggcccga tcattgcgtg caaggaacac cgggcgccgc
     2161 atttcacccc gcgctgcaaa tcccgcacgc cgccctggtg ctgcgcaagg gcatggagcg
     2221 catgatcgat tcctattcgg cattctatga gaatgaccac aagacgccga ccgggctcgt
     2281 cggctatttg cacgagcgcg gcgtctcccg ggtgtttctg gccggcctcg ctttcgattt
     2341 ttgcgtacgc tactcggccg aagacgcacg gcgtgaaggc tttactgttt tcgtcatcga
     2401 ggac
//
LOCUS       DATMQB010000058         3776 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1875428, whole genome shotgun sequence.
ACCESSION   DATMQB010000058 DATMQB010000000
VERSION     DATMQB010000058.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3776)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3776)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3776
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1875428"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1775)
                     /locus_tag="VNY79_02045"
     CDS             complement(<1..1775)
                     /locus_tag="VNY79_02045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HWX71261.1"
                     /translation="MPMPTVLAAAGIALCGALALAGQAAPAGAEAAHAIAMHGRPAMP
                     DGFTAPDYVNADAPQGGRMVQGVLGTFDSLNPFIVKGLAAQAIRGYVFESLMARGYNE
                     PFTLYGLLARTVETDEARSYVTFSLDPAARFSDGVPVTADDVIFSWQLLRDHGRPNHR
                     AFYSKVAKAEKLDARRVRFDLGGSNDRELPLILGLMPVLAQHAIDVARFEETTLAKPV
                     GSGPYVVAEIDTGKSVTLKRDPNYWGQALPINRGLWNFDALRFDYYRDANAYFEAFKA
                     GLYDVRSETDPGRWRTGYDIPAVRDGRIVKEAFANGLPKVNSAFVFNTRRPIFSDIRV
                     REAITLLFDAEWVNRNFFFDLYRRSAGFFPGSELSAYHRPADARERALLAPFPDAVRA
                     DVLDGTWSPPATDGSGRDRANLRQALTLLDAAGYEFKGTTLRARGGGRPFAFEIMVTS
                     RDQERLALAFAGNLARAGIQTQVRLVDAVQYDQRRVSFDFDMIENRWDQSLSPGNEQS
                     FYWGSAAADEQGSRNYMGVRSAAVDAMIEAMLRARARDDFVAAVRALDRVLVSGCYVV
                     PLFYLSEQWVARWSFVAHPARTSLSG"
     gene            2136..3023
                     /locus_tag="VNY79_02050"
     CDS             2136..3023
                     /locus_tag="VNY79_02050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007610528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HWX71262.1"
                     /translation="MTYRTAPAPARPVSRMLAAIAAIFAKPLLQSALLAIALAVAAGP
                     YALAQQSDPAPAAPKPKPAKKPAKPATPEAAPPAAQQMPPVQPQPGQAQQQGQGGQQQ
                     VQLIYSPWTKFCLKGQPGQAPDPNAKQVCFTGKDARIESGMPVVAAVLIEPEGQERKI
                     LRVTLPLGMQLVHGTRVIIDQNQPATAPYVICFTNGCMADYEANADMVGKLKKGQGLV
                     VQGINSTGQPISLTLPLADFAKAYDGPPTDPKEFEAQQRKLQDELQRRADEARKKLEA
                     EKGAPTSSATPAPPTGKTQ"
     gene            complement(3145..3477)
                     /gene="hspQ"
                     /locus_tag="VNY79_02055"
     CDS             complement(3145..3477)
                     /gene="hspQ"
                     /locus_tag="VNY79_02055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat shock protein HspQ"
                     /protein_id="HWX71263.1"
                     /translation="MNKVRNAKFQIGQVVRHRLYPFRGVVFDIDPIFSNTEEWYEAIP
                     VEVRPHKDQPFYHLFAENDETEYIAYVSEQNLLPDNSGEPVRHPQVAEVFVDDGKGGY
                     RPRHATTH"
     gene            complement(3563..>3776)
                     /locus_tag="VNY79_02060"
     CDS             complement(3563..>3776)
                     /locus_tag="VNY79_02060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012318633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HWX71264.1"
                     /translation="VQIAKRVFSPEPAEVAFAQKIIAAMPDASGAVMIDGKMQDDATW
                     KQAKVVVDLARLVAAKDPEMAARYQL"
BASE COUNT          688 a         1208 c         1276 g          604 t
ORIGIN      
        1 ccggagagcg aggtgcgcgc cggatgggcg acgaaggacc agcgcgccac ccattgctcg
       61 gaaagataaa acaacggcac cacgtagcag ccggagacca gcacgcggtc gagagcacgc
      121 accgcggcga cgaaatcgtc acgggcgcgg gcgcggagca tggcctcgat catcgcgtcg
      181 acggcggcgc tgcgcacgcc catgtagttg cgcgatccct gctcatcggc ggcggccgag
      241 ccccaataga agctttgctc attgccgggt gagagcgatt ggtcccaacg gttctcgatc
      301 atgtcgaagt cgaacgacac gcggcgctgg tcgtactgca cggcgtcgac gaggcggacc
      361 tgcgtctgga tgccggcgcg cgccagattg ccggcaaagg ccagtgcgag ccgctcctgg
      421 tcgcggcttg taaccatgat ctcgaaggcg aagggccgcc cgccgccgcg tgcgcgcagc
      481 gtcgtgccct tgaactcgta gcctgcggcg tcgagcaggg tgagcgcctg cctgaggttg
      541 gcgcggtcgc ggccggagcc gtcggtggcc ggcggcgacc aggtgccatc gagcacgtcc
      601 gcccgcactg catcggggaa cggtgcgagc agggcgcgtt cgcgcgcgtc cgccggacgg
      661 tggtaggcgg acagctccga gccgggaaag aagccggcgc tgcgccggta gagatcgaag
      721 aagaaattgc ggttgaccca ttcggcatcg aacaagagcg tgatcgcctc gcgcacgcgg
      781 atatcggaga agatcggccg ccgggtgttg aagacgaatg cggaattgac cttgggcagg
      841 ccgttggcga acgcttcctt gacgatgcgc ccgtcgcgca ccgcgggaat gtcgtagccg
      901 gtgcgccatc ggcccggatc cgtctcgctg cgtacgtcat aaaggccggc cttgaacgct
      961 tcgaaatagg cgttggcgtc gcggtaatag tcgaagcgca gagcgtcgaa gttccacagg
     1021 ccacggttga tcggaagggc ttggccccag taattggggt cgcgcttgag cgtcacgctc
     1081 ttgccggtgt cgatctcggc gaccacgtag gggccgctgc cgaccggctt cgccaaggtt
     1141 gtttcctcga agcgtgcgac gtcgatcgca tgctgcgcca agaccggcat cagcccgaga
     1201 atgagcggca gttcgcggtc gttgctgccg ccgaggtcaa aacgaacgcg gcgcgcgtcg
     1261 agtttctcgg ccttggccac cttggaataa aaggcgcggt gattgggccg gccgtgatcg
     1321 cgcagcagtt gccaggaaaa aatcacatcg tcggcggtca ctgggacgcc gtcggaaaag
     1381 cgagccgccg gatcgaggga gaaagtgacg tagctgcgcg cctcgtcggt ctcgaccgtg
     1441 cgcgccagca ggccgtagag ggtgaacggc tcgttatagc cacgcgccat caggctttcg
     1501 aagacgtagc cgcggatcgc ctgggcggcg agacccttga cgatgaacgg attgaggctg
     1561 tcgaaggtgc cgagcacgcc ctgcaccatg cggccgcctt gcggcgcatc ggcattgaca
     1621 tagtcgggcg cggtaaaccc gtcgggcatc gccggccgcc cgtgcatggc gatggcgtgg
     1681 gccgcctccg ccccagccgg cgctgcctga ccggcaagcg cgagcgcgcc gcacagggca
     1741 attcccgcgg cggcaaggac ggtcggcatc ggcatcagat gcatcggtgc gaaacaccgt
     1801 tcggcgcgcc gactcgcggc gatttgacag agctaccgtg cggcttggcc gccacgcaac
     1861 cgagcctgga ggccttatca ccaggataag aggccgaggg cggtggcttt atctgcgcgc
     1921 cgaggtgggc tatttcgagg atcatctgcg gctgatcccg tcacttcgcg gtgtcacgct
     1981 gttgccgtat tctgcgtcga atgaccgttg agcagggggt acccgctcgg cgcggggcgg
     2041 tgacgggtga cgggtcggca cgatatcgga ccattgttcc gcgagtcgat cagggtcgat
     2101 tggcgtgcgg cagcactaac aagggactgc atctcatgac ctatcggacc gcgccggcac
     2161 cggcgagacc ggtgagccgg atgctcgccg ccattgccgc gattttcgcc aagcccctcc
     2221 ttcagagcgc cctgttggcg atcgcgctcg ccgttgccgc cggcccatac gccttggcgc
     2281 agcagtcaga tccggcgccc gccgcaccca agccgaagcc ggccaagaag ccggccaaac
     2341 cggcgacgcc cgaggcggcg ccgccggcgg cgcagcagat gccacccgta caaccccagc
     2401 ctgggcaggc gcagcagcag ggccaaggcg gccagcagca ggtgcagctc atctactcgc
     2461 cctggaccaa gttctgcctc aaggggcagc cggggcaggc gccggatccg aacgccaagc
     2521 aggtgtgctt caccggcaag gacgcccgca tcgaatccgg catgccggtc gtcgctgccg
     2581 tcctcatcga accggaaggc caggagcgca agatcctgcg cgtgactttg ccgctcggca
     2641 tgcagctcgt ccacggcacc cgcgtcatca tcgatcagaa ccagccggcg accgcgccct
     2701 acgtgatctg cttcaccaac ggctgcatgg cggactacga agccaacgcc gacatggtcg
     2761 gtaagttgaa gaaggggcag gggctcgtgg tccaggggat caactccacc gggcagccga
     2821 tcagcctgac gctgccgctc gccgatttcg ccaaggccta tgacgggccg ccgaccgatc
     2881 ccaaggaatt cgaggcgcaa cagcgcaagc tgcaggatga gctgcagcgg cgtgcggacg
     2941 aggcgcgcaa gaagctcgaa gccgagaagg gcgccccaac ctcatcggca acgccggcgc
     3001 cgccgaccgg caagacccag taggtcacag ccgcaatctt gcgaagctcc gaagcgatcc
     3061 aagccgacgc gcaacggctg gattgcctcg gcacggcgtg ccccgcaata aaatcggcgg
     3121 cgcacaaggc gaagatttgt ttgatcagtg cgtggtggcg tggcgcggcc gatagccgcc
     3181 cttgccgtcg tccacgaaca cttcggcgac ctgcggatga cgcaccggct cgccgctgtt
     3241 gtccggcaaa agattctgct cggacacgta ggcgatgtat tcggtttcgt cgttctcggc
     3301 gaacaaatga tagaacggct gatccttgtg cgggcggact tcaaccggaa tcgcctcgta
     3361 ccattcttcc gtgttgctga agatcggatc aatgtcgaac acgacgccgc ggaacggata
     3421 caggcggtga cggaccactt ggccgatctg aaatttggcg ttgcggacct tgttcatgac
     3481 cgcaggttcc cggcagccgg cgcacgccgc ttattacctt caacgattat ggcgcgccgg
     3541 ggacgaggtc gtgaatggtc gttcataact ggtaccgggc tgccatttcc gggtcttttg
     3601 cggcaacgag ccgtgccagg tcaacaacca ccttggcctg cttccaggtg gcgtcgtcct
     3661 gcatcttgcc gtcgatcatc acagcgccgc tggcgtccgg catcgccgcg atgattttct
     3721 gcgcgaatgc cacctccgcg ggctccggag agaacacgcg cttggcgatc tgcacc
//
LOCUS       DATMQB010000059         3859 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_944502, whole genome shotgun sequence.
ACCESSION   DATMQB010000059 DATMQB010000000
VERSION     DATMQB010000059.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3859)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3859)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3859
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_944502"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(223..1560)
                     /locus_tag="VNY79_02065"
     CDS             complement(223..1560)
                     /locus_tag="VNY79_02065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HWX71265.1"
                     /translation="MTRPQRPTHDVPGFAARRIAADVLDGVLRRRRALDDEFEAAAAR
                     PAFSELAGRDRAFVRALTATALRRLGTLRHLIGLCLEEGLPAQAPRVETALLVGAAQI
                     LFLDVPDHAAVDLSVRLAQADRQAARYAGLVNAVLRRLAREGAERLAALDPAILDTPP
                     WLMARWSENYGEATARAIAGAHGHEPALDLTVKSDPETWATKLDGRLLPTGSVRTVAH
                     GAVTSLPGFAEGAWWVQDAAAALPARLFGNVGGLRVTDLCAAPGGKAAQLAAAGARLT
                     AVDRSPARLERLRGNLSRLSLEAELVCTDVEEWTAEPFDAALLDAPCSSTGTIRRHPD
                     VPWLKQPSDLAALAALQRRLIARAATLIRAGGILLYCTCSLEPEEGQQAIDEFLAREA
                     GWRRVPITPSELAGRAEFITNDGDLRTLPCHFPDSDQRFAGIDGFYAARLEKR"
     gene            1673..1912
                     /locus_tag="VNY79_02070"
     CDS             1673..1912
                     /locus_tag="VNY79_02070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006206647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1674 domain-containing protein"
                     /protein_id="HWX71266.1"
                     /translation="MPLDEKVPKPSASSAASDTAPERHSPTTAAQRALAEADARRAER
                     DHKPASSEPREVNGRGGLDPTRYGDWEINGLTSDF"
     gene            2016..2567
                     /locus_tag="VNY79_02075"
     CDS             2016..2567
                     /locus_tag="VNY79_02075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HWX71267.1"
                     /translation="MRFLSNRARLPILAGSVFAVGLLVNAAVRSPTTGRSAALAVPAF
                     GAARGGQPAALGGARPSGLDPRFGYSAQVVHVIDGDTFEARVAVWPGIEIKTKVRLRG
                     IDAPELHARCDDEWVRAQAARAALEKILAQGAVRIAQVGPDKYAGRIDAVVSTRNTAD
                     VSAALLSGGWARSYSGGRRGSWC"
     gene            complement(2675..3190)
                     /locus_tag="VNY79_02080"
     CDS             complement(2675..3190)
                     /locus_tag="VNY79_02080"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HWX71268.1"
                     /translation="MRGKILFAAALAAIAGASVATPRAALAHGQPVTMGGSYMAGTIV
                     VRTRERHLYYVLGGGQAIRYPVGVGRAGMQWSGTSFISGKYIRPAWQAPASIRRDYRS
                     GAAVVPGGSPSNPMGVAAMTLSGTEYAIHGTNAPGTIGGYVSHGCIRMFNEDITDLFH
                     RVGVGTQVVVQ"
     gene            complement(3289..>3859)
                     /locus_tag="VNY79_02085"
     CDS             complement(3289..>3859)
                     /locus_tag="VNY79_02085"
                     /inference="COORDINATES: protein motif:HMM:NF017496.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HWX71269.1"
                     /translation="RYELFRGEVYAMSPETAGHADTKAAVYNALLAGIRARHLSCHVF
                     PDGMTVRIDETTAYEPDALVYCGEKLSPSAIEVPEPVIVVEVLFPSSRQVDLAIKLAG
                     YFLLPSLAHYLIVDPTRSLILHHSRSGDAISPASSPRVRSPSTRRGWNWPWRTSRPAE
                     LSEIARRAGARRAQAEKICENFTVPCGRS"
BASE COUNT          668 a         1259 c         1357 g          575 t
ORIGIN      
        1 gtatgagcga caggcgcagc accggatggc cgctgagcca accggcgaag cgccgcagcc
       61 cgccgcggag gacgagccag gacagcttgg cgtggtcggc aactgaaacg cgcgacatcg
      121 acgcgctcgc ccctcagtta gacgcgggcg tcccggcgtc ccgcggcgtc acctataacg
      181 gaatggtccg ccgacggcca acacctgcaa ctgggcggaa cgtcaccgct tttcgagccg
      241 cgccgcgtag aaaccgtcga tccccgcaaa ccgctgatcc gaatcgggga aatggcacgg
      301 cagggtgcgc agatcgccgt cgttggtgat gaactcggcg cggccggcca gctcggaagg
      361 cgtgatcggc acgcgccgcc agccggcctc gcgcgccagg aattcgtcga tcgcctgctg
      421 accttcctcc ggctcgagcg agcaggtgca atagaggaga atgccgcccg ccctgatcag
      481 ggtggcggcg cgtgcgatga gccggcgctg aagtgccgcg agcgcggcga gatcggacgg
      541 ctgcttgagc cagggcacgt caggatgccg gcggatcgtg cccgtcgagg agcacggtgc
      601 gtcgaggagt gcggcgtcga acggctcggc ggtccattct tcgacatcgg tgcagacgag
      661 ctcggcttca agcgacaatc gggagagatt tccacgcagg cgctcaagcc gggccggcga
      721 gcggtcgacc gcggtgaggc gggcgccggc ggcggcaagc tgcgccgcct tgccgccggg
      781 agcggcgcac aggtcggtca cgcgaagccc gcccacattg ccgaacaggc gcgccggcaa
      841 ggccgccgcg gcgtcctgca cccaccaggc gccctcggca aagcccggaa gcgacgtcac
      901 ggcaccatgg gcgacggtcc gcaccgagcc ggtcggcagc aggcggccgt caagcttggt
      961 ggcccacgtt tcggggtcgc tcttcactgt gagatcgaga gccggctcat ggccatgggc
     1021 tccggcgatg gcacgggcgg tggcctcgcc gtagttctcg ctccagcgcg ccatcagcca
     1081 cggcggcgtg tcgagaatgg ccgggtcgag ggccgcgagc cgctccgccc cttcacgcgc
     1141 gaggcgccgc aatacggcgt tgacgagacc ggcatagcgc gccgcttgcc ggtccgcctg
     1201 cgcgagccgc accgaaagat cgacggcggc gtgatccggc acatcgagaa aaagaatctg
     1261 ggccgctccg acgagcagtg cggtctcgac gcgcggcgct tgcgcgggca ggccttcctc
     1321 gagacagagg ccgatgaggt ggcgcagcgt acccagccgg cgcagcgccg tcgccgtgag
     1381 cgcccggacg aacgcacggt cgcgccccgc cagttccgaa aaggccgggc gcgctgcggc
     1441 cgcttcgaac tcgtcgtcga gggcgcggcg gcggcgcagc acgccgtcga ggacgtcggc
     1501 cgcgatacgg cgggcggcga aacccggcac atcgtgggtg gggcgctgcg gccgagtcat
     1561 ggatcgcggc ggcgagcctt catgggattt ctttgcacgg atcacgaggc gcgagcgaga
     1621 ggcgcccacc gaagacttgc ggcgccgtcc ggcccgcgcc aagtgattgc gtatgccgct
     1681 cgacgagaaa gtgccaaaac cttccgccag tagcgcggcc tccgacactg cccctgagcg
     1741 gcattcgccg acgacggcgg cccagcgggc gctcgcggaa gcggacgccc gccgcgccga
     1801 gcgcgaccac aagccggcga gcagcgagcc gcgggaagtc aacgggcgcg gcggcctcga
     1861 tccaactcgt tacggcgatt gggaaatcaa cggactcacc tcagatttct agtgcgtcgc
     1921 cttgacaatt ttcctattca gttgaaaata gtcctagatc gcgtgtagcg tctaagtatc
     1981 taaataggat ccgctgctat caaaggtgcg ccaagatgcg cttcctttcg aaccgtgccc
     2041 gtctgccgat tctggctgga tcggtgtttg cggtcggcct cctggtcaac gcagcggtaa
     2101 ggtcgccgac gaccgggcgc tcggctgcgt tggccgtgcc ggcgttcggc gcagcgcgtg
     2161 gcgggcagcc ggcagcactc ggcggtgcgc gtccgtcagg gctcgatccg cggttcggtt
     2221 attccgccca agtggtgcac gttattgacg gtgacacctt cgaagcgcgg gttgcggtct
     2281 ggcccgggat cgagatcaaa accaaggtac ggctgcgcgg tatcgatgcg cctgagcttc
     2341 atgcccgctg tgacgacgag tgggtgcggg cgcaagcggc acgggcggcg ctggagaaga
     2401 ttctagcgca gggcgcggta aggattgcgc aagtcgggcc ggacaaatac gccgggcgta
     2461 tcgacgccgt ggtctcgacc cgcaacaccg cggacgtttc cgcggcactc ctgagcggcg
     2521 gctgggcacg cagctatagc ggcggccggc gcgggagctg gtgctgaaag ccggtagtca
     2581 gggcacgtcg ggtatcagga gtcgggatcg gcacctcaag tatcagtgcc agcccccgac
     2641 gcctgatcct ggacccccgt cccaccaccc ctgattactg gaccacgacc tgcgtgccga
     2701 cgccgacccg atggaaaagg tcggtaatgt cctcgttgaa catgcgaatg cagccgtgcg
     2761 agacgtagcc gccgatcgtt cccggcgcgt tggtgccgtg aatggcgtat tcggtgcccg
     2821 aaagcgtcat tgccgcgaca cccatcggat tggacggcga gccgcccggg acgacggccg
     2881 cgcccgagcg gtagtcgcgc ctgatcgacg ccggcgcctg ccaggccggc ctgatgtatt
     2941 tgccgctgat gaacgacgtt ccggaccact gcatgcctgc gcggccgacg ccgaccggat
     3001 agcggatcgc ctgaccgccg ccgagcacgt agtagaggtg ccgctcacgc gtcctcacca
     3061 cgatggtgcc ggccatataa ctgcccccca tcgttaccgg ctggccgtgc gcgagcgccg
     3121 cgcgcggcgt ggcgacggaa gcaccggcga tggccgccag ggcggccgca aacagaattt
     3181 tgcctcgcat tgtgaaaacc ccgacaccgg attgtgccgc cgaccgtgct ccccggcggg
     3241 gccgggttcg cggcggaaaa ccaattatag tcgaaagtgc gggcgcgctc agcttcgccc
     3301 gcatgggacg gtaaagtttt cacaaatttt ttccgcctgt gcccttcgtg caccagcgcg
     3361 gcgggcgatc tctgacagtt cagccggcct agacgtccgc cagggccagt tccagccccg
     3421 gcgggtcgag ggcgatcgca ccctcggtga cgacgcgggt gagatggcgt cgccggaccg
     3481 cgaatgatga aggatcaatg accgagtcgg atcgacgatg aggtagtggg cgaggctagg
     3541 gagcaggaaa tagccggcga gcttgatcgc aagatcgact tggcggctcg aggggaacag
     3601 cacctcgacg acgatcactg gctcgggcac ttcgatcgcg gacggggaaa gcttctctcc
     3661 gcaatagacc agcgcgtcgg gctcgtacgc agtcgtctcg tcgatgcgaa cggtcatgcc
     3721 gtcgggaaat acatgacagg agagatggcg cgctcggatg cccgccagca aggcattgta
     3781 gacggcagcc ttagtgtcgg cgtgcccggc tgtttcaggg gacatcgcgt agacctcgcc
     3841 cctgaacagc tcatagcgt
//
LOCUS       DATMQB010000060         3743 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1875745, whole genome shotgun sequence.
ACCESSION   DATMQB010000060 DATMQB010000000
VERSION     DATMQB010000060.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3743)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3743)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3743
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1875745"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(28..1614)
                     /locus_tag="VNY79_02090"
     CDS             complement(28..1614)
                     /locus_tag="VNY79_02090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71270.1"
                     /translation="MTRSALIGFLLLALLGAPRPARAHDDAAPPKRLGTVAFANSCAP
                     EAQESFERGVALLHSFAFIAGEQAFREALAHDPACAIATWGIATVLVGNTFAIGPIAE
                     EAQRAFAAIERGRAMGAKTERERDYIEAIGAYYDHFGERLPRARMQSLSDAFEALANR
                     YGDDDEAQIFSALYLTATQSPADKSYARAVKAAAILEAQFARHPDHPGVAHYLIHSYD
                     YPPIAQKGLPAALCYADIAPDASHALHMPSHIFTRVGAWRESIDTNARSIASAMAENN
                     LGSVLHAMDYTVYADLQLARDAAAQVVVKEADNISTPAVVSLYARAAIPARYAVERGQ
                     WTEAAALDDPADSKFPYTEAMTLFARAVGAARSGDPAAAEKDVVRLAAIAAALNAAKN
                     DYWSGEVEVQRLGAAAWIAFAAGKRDEALGLMRAAADMEAASEKSAISPGRILPAREL
                     LGDMLLESGSAEDALAAYEAALVNDPKRLRSLYGAGRAAAAAGSSDKARYYFSRIVDM
                     ADADSTRPEMIRAREYLAGK"
     gene            complement(1687..2289)
                     /locus_tag="VNY79_02095"
     CDS             complement(1687..2289)
                     /locus_tag="VNY79_02095"
                     /inference="COORDINATES: protein motif:HMM:NF014667.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031966 - mitochondrial membrane
                     [Evidence IEA];
                     GO_process: GO:0033617 - mitochondrial cytochrome c
                     oxidase assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SCO family protein"
                     /protein_id="HWX71271.1"
                     /translation="MKARRSPRGGAIAAVGLVMLCIVLPARPAGAQNASPREGSSLRF
                     ALTAASDGAAITEQTYRGKWLVVYFGYTSCPDVCPTTLLDIAQTLEALGPRAGAVQGL
                     FITLDPKRDTPGVLTEYVKSFDPHLAALTGTPAQIAAAAKDFHVFHERHDNDDGGYSV
                     DHSAYVYLIDPEGRLARAITSDGGSKEIAAALSALMNASR"
     gene            complement(2286..3596)
                     /locus_tag="VNY79_02100"
     CDS             complement(2286..3596)
                     /locus_tag="VNY79_02100"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose/GDP-mannose dehydrogenase family
                     protein"
                     /protein_id="HWX71272.1"
                     /translation="MRVTMIGAGYVGLVSGACFADFGHQVTVIDRDAGRVAALNRGEI
                     PIFEPGLSDLVEANFREGRLEFATETQRAADAEAVFIGVGTPSRRGDGHADLSFVYDA
                     VHEIAPVLSGAAVVVTKSTVPVGTGDEIERILRERRPDAAIEVVSNPEFLREGAAIQD
                     FKHPDRIVVGTENERARTVLAEIYRPLYLNAAPILYVSRRTAELIKYAANAFLATKIT
                     FINEMADLCEQVGADIQDVARGMGLDNRIGGKFLHAGPGFGGSCLPKDTVALIKTAHD
                     HGAQLRLVEAVTAVNDQRKRAMARKVLTALDGSLRGKTIAVLGLTFKPNTDDMRDSPA
                     IPLITALQDLGAKVRGYDPAGMEQAKPHLPDIIYCHSAYEAAAGADAVVIATEWEQFR
                     ALDLARLRTAMTRPVIVDLRNIYRAEEMQRARFRYLGVGRAEVK"
BASE COUNT          588 a         1232 c         1300 g          623 t
ORIGIN      
        1 gcgcgcccga cgggttgcgc ggcgccgtca tttgccggcg agatactcgc gcgccctgat
       61 catttccggc cgcgtgctgt ccgcatccgc catgtcgacg atgcggctga agtaatagcg
      121 cgccttgtcg gaactgccgg ccgccgcggc ggcgcggccg gcgccataga ggctgcgcag
      181 ccgtttcgga tcgttgacga gggcggcttc gtaagcggca agcgcatctt cggcgctgcc
      241 gctttccagc agcatgtcgc ccagcagctc gcgcgccggc aggatgcggc cgggagatat
      301 cgcgctcttc tcgctggcag cttccatatc ggccgcggcg cgcatgaggc cgagcgcttc
      361 gtcgcgcttg cccgcggcga aggcgatcca ggcagcggcg ccgagacgct gcacctcgac
      421 ctcgccggac cagtagtcgt tcttcgccgc attgagggcg gcggcgatgg ccgccagccg
      481 aacgacgtcc ttctccgccg cggcgggatc gccgctgcgc gcagcgccga ccgcgcgcgc
      541 gaacagcgtc atcgcctcgg tgtagggaaa cttgctgtcg gccggatcgt ccagggcggc
      601 ggcctccgtc cattgaccgc gttcgacggc gtagcgcgcc gggatcgcgg cgcgggcata
      661 gagcgagacc accgccggcg tggagatatt gtctgcttcc ttgaccacga cttgcgcggc
      721 ggcgtcgcgc gccaattgca gatctgcata gacggtgtag tccatggcat ggaggacgga
      781 acctaaattg ttttccgcca tcgccgacgc gatcgaacgc gcgttggtgt cgatcgattc
      841 ccgccaggcg ccgacgcggg tgaagatgtg cgacggcatg tgcagcgcat gcgaggcatc
      901 gggcgctata tcggcatagc acagcgccgc cggcaggcct ttttgcgcga tcggcggata
      961 gtcgtagctg tgaatgagat aatgggcgac gcccggatga tcgggatgcc tggcgaattg
     1021 cgcctcgagg attgccgccg ccttcacggc ccgcgcatag ctcttgtcgg caggcgactg
     1081 cgtggcggtg aggtacagcg cactgaatat ctgcgcctcg tcgtcgtcgc cgtagcggtt
     1141 ggccagagct tcgaaggcgt cggacagcga ctgcatgcgc gcccgcggca gccgctcgcc
     1201 gaaatgatcg taataggcgc caatcgcctc gatatagtcg cgctcgcgct cggtcttggc
     1261 gcccatggcc cggccgcgct cgattgcggc gaaagcacgc tgcgcctctt ccgcgatcgg
     1321 gccgatagcg aaggtgttgc cgacaagcac ggtcgcaatt ccccaggtgg cgatggcaca
     1381 ggccgggtcg tgggcaagcg cctcgcggaa cgcctgctcg ccggcgatga acgcgaaaga
     1441 atggagcaac gcgacgccgc gctcgaaact ttcctgggcc tccggcgcgc aggaattggc
     1501 aaaggcgacc gttccgagcc ttttcggcgg agcggcatcg tcatgcgccc gcgcgggccg
     1561 cggcgccccc agcagtgcca gcagcaaaaa accgatgagc gcgctacggg tcatggcggc
     1621 ctccactcgt tttgcgaagt taccacgcgg cgcgcgtccg gtcactttgc cggatttagc
     1681 ggttcctcag cgcgaggcgt tcatcagcgc cgacagcgcc gcggcgatct ctttgctccc
     1741 gccgtcgctg gtgatcgccc tggccagcct cccctcagga tcgatgagat agacgtaggc
     1801 gctgtggtcg acggaatagc cgccgtcgtc gttgtcgtgc cgctcgtgga agacgtgaaa
     1861 gtccttggcc gctgccgcga tctgcgcggg agtgccggta agggcggcga ggtgcggatc
     1921 gaacgatttg acgtactcgg tcagcacgcc gggcgtatcg cgcttcgggt cgagcgtgat
     1981 gaacaatccc tgcaccgcgc cggcgcgcgg gccgagcgcc tcgagcgtct gcgcgatatc
     2041 cagcaatgtc gtgggacaaa cgtcggggca ggaggtgtag ccgaaataga cgacgagcca
     2101 tttgccgcga taggtctgct cggtgatcgc cgctccgtcg cttgccgcgg tcagcgcgaa
     2161 acgcaggctg gacccttcgc gaggcgatgc attctgcgca ccggccggcc gcgccggcag
     2221 gacaatgcag agcatgacca ggccgaccgc cgcaatcgcc ccgccgcgcg ggctgcggcg
     2281 cgccttcact tcacctccgc ccggcccacg ccgagatagc ggaagcgcgc gcgctgcatc
     2341 tcttcggcgc gatagatatt ccgcaggtcg acgatcaccg gccgcgtcat cgcggtgcgg
     2401 agcctggcga gatcgagcgc ccggaactgc tcccattcgg tcgcgatcac gaccgcgtcg
     2461 gcgccggcag ccgcttcgta ggcgctgtgg cagtagatga tgtcgggaag atgcggcttc
     2521 gcctgttcca tgccggccgg atcgtaaccg cgcaccttgg cgccgaggtc ctgcagcgcg
     2581 gtgatcagcg ggatcgccgg cgagtcgcgc atgtcgtcgg tgttcggctt gaaggtgagg
     2641 ccgagcacgg caatggtctt gccgcgcagc gagccgtcga gtgcggtcag gaccttgcgc
     2701 gccatggcgc gtttgcgctg atcgttgacg gcggtgacgg cttcgaccag gcgcaactgg
     2761 gcgccgtgat cgtgcgccgt cttgatcagc gcgacggtgt ctttcggcag gcacgagccg
     2821 ccgaagccgg ggccggcatg caggaacttg ccgcctatgc ggttgtcgag gcccatgccg
     2881 cgggccacat cctggatatc ggcgccgacc tgctcgcaca gatccgccat ctcgttgatg
     2941 aaggtgatct tcgtggcgag aaaggcgttc gcagcgtatt tgatcagctc ggcagtgcgc
     3001 cggctgacgt agaggatcgg tgcggcgttg aggtagagcg gccggtagat ttcggccagc
     3061 acggtccgcg cccgctcatt ttccgtgccg accacgatgc ggtcgggatg cttgaaatcc
     3121 tggatggcgg cgccctcgcg caggaattcc gggttggaca cgacctcgat ggccgcgtcc
     3181 ggacgccgct cgcgcaggat gcgttcgatc tcgtcgccgg tacccacggg gaccgtcgat
     3241 ttcgtcacca ccacggccgc gccggagaga accggcgcga tctcgtgcac cgcgtcgtag
     3301 acgaagctca gatcggcatg accgtcgccg cggcgcgacg gcgtacccac cccgatgaat
     3361 acggcttcgg catcggccgc gcgctgcgtt tccgtggcga attcgagccg gccttcgcgg
     3421 aagttcgctt cgacgaggtc ggaaaggccg ggctcgaaga tcggaatctc gccgcggttg
     3481 agcgcggcga cgcggccggc atcccggtcg atcaccgtca cctgatgacc gaaatcggca
     3541 aagcaggcgc cggagacgag cccgacgtag ccagccccga tcatggtcac gcgcatgaaa
     3601 gcctccgctc gagctcagga ctgatcgggt tccgcggccg gggcagacgt tccctcgaac
     3661 gccttgcggg gcgccgcggg cgccttggcc gcgcgcaggc gcaggcgcga aagccattgc
     3721 cgcccgaaca acaccgcgac cag
//
LOCUS       DATMQB010000061         4958 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3735669, whole genome shotgun sequence.
ACCESSION   DATMQB010000061 DATMQB010000000
VERSION     DATMQB010000061.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4958)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4958)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4958
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3735669"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..520
                     /locus_tag="VNY79_02105"
     CDS             <1..520
                     /locus_tag="VNY79_02105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013896886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HWX71273.1"
                     /translation="IRRGLRRTYQISQLFGGLSVGDSVYLACRGVSRGRFALSRPRPD
                     DRTMMQAESIVHAVHLESLRDHLVASLSHGQQRQLEIALALAGAPRFILFDEPAAGLS
                     PPERRDLVTILNALPKHIGFIIIEHDLDVALRVTEYVSMMHNGRLFKEGTPQEIEDDP
                     EVQKVYLGGGHG"
     gene            513..2723
                     /locus_tag="VNY79_02110"
     CDS             513..2723
                     /locus_tag="VNY79_02110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX71274.1"
                     /translation="MAEAGGNPALEISDLHVYYGESHAIQGVSMTIGAGVLAVVGRNG
                     MGKSTLCNTVTGLKASRSGSIRIFGRETSRLEPHVIHRHGVGYVPQGRRVWPSLSVDE
                     HLRLVATGGADAKWTVERVYQTFPRLYERRASGGSQLSGGEQQMLAIGRALLGNPRLL
                     VMDEPTEGLAPIIVDQVEAMLVQLAKDDDMAVLLIEQNIGVATAVSDHVAIMVNGRIN
                     RVMETGALAADRELQQRLLGVGKQDEEEGPLPEETAAGESAEELMAQVYRVERGEAAA
                     AAAPSATLRPSAPLSERWNMPATSLRQSIVEASQPEPEGARIFSIPFAERIGRTAIVA
                     GTFDTKGRELNFIRDRLKALGIPTRTVDLSTSRKPSTADVTPLHVASMHLRGSSEVFS
                     DDRGRSVTAMAEAFARWIAREQRIGGIISAGGSGGTTLATAGMRALPVGIPKVMVSTV
                     AAGDVRAYVGASDVVMFHSVADIQGLNAITERVLANAAHALAGMIAQMPTREAYEARR
                     KIARPALGVTMFGVTTPCVQAVTRRLEADYDCLVFHATGTGGRAMEALGDSGLLAGFL
                     DLTTTEVADMLVGGVLPAYQDRLGAPIRTGLPYVGSAGALDMVNFGPRDTVPEKFKGR
                     KFVVHNANVTLMRTTSDENRAAGEWIGGRLNQMEGPVRFLLPEGGVSGLDRPGAPFHD
                     PEADEALFEAIEKTVRPTGRRLVERVRANINEPVFADAVVEAFGSISPSVRKRA"
     gene            2772..>4958
                     /locus_tag="VNY79_02115"
     CDS             2772..>4958
                     /locus_tag="VNY79_02115"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin domain-containing protein"
                     /protein_id="HWX71275.1"
                     /translation="MSANIFETVLLSLIGPAVAIVILVYIMRWLYRRSTKETAFVRTG
                     FLGEKVVVNGGAFVIPVLHEITPVNMNVMRIEVVRRDNGALITRNRMRVDIIAEFFVR
                     VGASRAAVAAAAQTLGRRTLQEDGIRSLLEGKFASSMRMVAAQMTLEEMHEQRRDYAN
                     QVRDLASEALAANGLELENVAIVDLDQTSLEYFDPSNAFDAEGLTQLTESIETRRKMR
                     NEIEQRTLVEIRSQNLEAQKKVFEIDRETEYARLEQEREVEFRRAVQRSELTRERALR
                     EQEAEEAQLSSRESVEKARLAQQRAITEERIRHEEDTQRREIARRRALDEAELKTREQ
                     TEREQINVELQLETARIAREREQRELEITRQKALEILELDRQIALSEKTLSVIKAEAE
                     KRRTEIVENQHTEAERIAQDRALDQVRLERERHLEGLQIAKRQAFEEAEIAAAEEVER
                     ARIATERGIEEARIAKDRDIRTLATERDKLVEIAEMAKAIELAKKGAERSAALAASEA
                     VRAKVIEAEEQAITTREREIAERRKLTDMIAARREAEREALRITAKAEADMKAARSFA
                     EAQKIAATAAAEAEKIRALAAAERYQVDAAGARQINEAENVLSQEARAGRLREKLLER
                     IEGIVRESVRPLEKIEGIKILHVDGASGGSSRRNVTDEVIDSALRYRVQAPMIDNLMR
                     EIGIEGGSLGRMTEVLRDAKDIAALTRDGKKGAKEKPVKPGEDDRDR"
BASE COUNT          892 a         1679 c         1682 g          705 t
ORIGIN      
        1 gatccggcgc gggctgcggc ggacgtatca gatatcgcag ctcttcggcg ggctcagcgt
       61 cggcgattcc gtttatctcg cctgccgcgg cgtttcgcgc ggccgcttcg ccctgtcgcg
      121 gccgcgccct gacgaccgca cgatgatgca ggcggaatcg atcgtgcacg ccgtgcacct
      181 tgaaagcctg cgcgaccatc tggtcgcgag cctcagtcac ggccagcagc ggcagctcga
      241 gatcgcgctc gcgctcgccg gggcgccgcg cttcattctg ttcgacgagc ctgcggccgg
      301 cctgtcgccg ccggaacgcc gcgatctcgt caccatcctc aacgcgctgc cgaagcatat
      361 cggcttcatc atcatcgagc acgatctcga cgttgcgctg cgcgttacag aatacgtctc
      421 gatgatgcac aacgggcgcc tgttcaagga gggcacgccg caggagatcg aagacgaccc
      481 cgaggtgcag aaggtctatc tcggaggcgg ccatggctga ggccggcggc aatcccgcac
      541 tcgagatcag cgacctccac gtctattacg gcgagagtca cgccatacaa ggcgtgtcca
      601 tgacgatcgg cgccggcgtt ctcgccgtgg tcggccgcaa cgggatgggc aagagcacgc
      661 tctgcaacac cgtcaccggc ctcaaggcct cgcgctcggg cagcatccgc atcttcggcc
      721 gcgagacctc ccgcctcgag ccgcacgtca ttcaccggca cggcgtcggc tacgtcccgc
      781 aagggaggcg cgtctggccg agcctgtcgg tcgacgagca tctgcgcctg gtcgccaccg
      841 gcggcgcgga tgcgaagtgg acggtcgagc gcgtctacca gaccttcccg cggctctacg
      901 agcggcgagc gagcggcggc tcgcaattgt ccggcggcga gcagcagatg ttggcgatcg
      961 gccgcgcgct gctcggcaat ccgcgcctcc tggtcatgga cgagccgacc gaagggctcg
     1021 caccgatcat tgtcgatcag gtcgaggcga tgctggtgca gcttgccaag gacgacgaca
     1081 tggccgtcct gctcatcgag cagaacatcg gcgtcgccac tgcggtgtcc gatcacgtcg
     1141 ccatcatggt caacggcagg atcaaccgcg tgatggagac cggcgcgctt gccgccgacc
     1201 gcgagctgca gcagcgcctt ctcggcgtcg gcaagcagga cgaagaggaa gggcccttgc
     1261 cggaggagac cgcggccggc gagagcgccg aagagctgat ggcgcaagtc tatcgcgtgg
     1321 aacgcggcga ggccgccgca gccgccgctc cgtccgcgac tctccggccg agcgctccac
     1381 tttccgagcg ctggaacatg ccggcgacga gcctgcggca atcgatcgtc gaagcgtcgc
     1441 agcccgagcc cgaaggcgcg cggatctttt ccatcccgtt cgccgagcgt atcggccgca
     1501 ccgccattgt cgccggcacc ttcgacacca agggccgcga gctcaatttc atccgcgacc
     1561 ggctcaaggc actcggcatt ccgacccgca cggtcgatct ctccacctcg cgcaagccct
     1621 cgaccgccga cgtgacgccg ctccatgtcg caagcatgca tctgcgcggc agctccgaag
     1681 ttttctccga cgatcgcggc cgctcggtga cggcgatggc cgaggcgttc gcgcgctgga
     1741 tcgcgcgcga gcagcgcatc ggcggcatca tttcggccgg cggctccggc ggcacgacgc
     1801 tggcgacggc gggaatgcgt gctctgccgg tcggcattcc gaaggtcatg gtgtcgaccg
     1861 tcgccgccgg tgacgtgcgc gcctatgtcg gcgcgagcga tgtggtgatg tttcattcgg
     1921 tcgccgacat tcagggcctc aacgcgatca cggaacgcgt gctcgccaat gccgcacacg
     1981 cgctcgcggg catgatcgcg cagatgccga cgcgcgaggc ctacgaggca cgacgcaaga
     2041 tcgcccggcc ggccctcggc gtcaccatgt tcggcgtcac cacgccctgc gtgcaggcgg
     2101 tgacccggcg gctcgaggcc gactacgatt gtctcgtttt ccacgccacc ggcaccggcg
     2161 ggcgggccat ggaagcgctc ggcgattccg ggctgctcgc cggattcctc gacctcacca
     2221 ccaccgaggt cgccgacatg ctcgtcggcg gcgtcctgcc ggcctaccag gatcggctcg
     2281 gcgcgccgat ccgcaccggc cttccttatg tcggctccgc cggcgcgctc gatatggtta
     2341 atttcggacc gcgcgacacc gtgccggaga agttcaaagg ccgaaaattc gtcgtccaca
     2401 atgccaacgt gacgctgatg cgcacgacca gcgatgaaaa ccgggccgct ggcgaatgga
     2461 tcggcgggcg gctcaatcag atggagggcc cggtccgctt tctgctcccg gagggaggcg
     2521 tgtcggggct ggaccggccg ggcgcgccgt ttcatgatcc cgaggcggac gaggccctgt
     2581 tcgaggccat cgagaagacc gtgcgcccga ccgggcgccg gcttgtggag cgtgtgcgcg
     2641 cgaacatcaa cgaaccggtt tttgccgacg cagtggtcga ggccttcggc tccatatcgc
     2701 cgtcggtccg caagagggcg tgagcggcga cgcggacatg aacatcaggg cgtcgtgtgt
     2761 ggaggggtaa catgagtgcg aacatctttg agaccgtgct gctctccctg atcggccctg
     2821 cggtcgccat cgtcatactc gtctacatca tgcgctggct ctaccgccgc tcgaccaagg
     2881 aaacggcgtt cgtgcgcacc ggtttcctcg gcgagaaggt cgtggtcaac ggcggcgcct
     2941 tcgtcatccc ggtgctgcac gagatcaccc cggtcaacat gaacgtgatg cgcatcgagg
     3001 tggtgcgccg cgacaacggc gcgctgatca cgcgcaaccg catgcgcgtc gacatcatcg
     3061 ccgagttctt cgtgcgcgtt ggcgcgtcgc gcgcggcggt cgccgccgcc gcgcagacgc
     3121 tcggccggcg cacgctgcag gaggacggca tccgcagcct gctcgaaggc aaattcgcct
     3181 cgtcgatgcg catggtggcg gcacagatga cactcgagga aatgcacgag cagcgccgcg
     3241 actacgccaa ccaggtccgc gacctcgcct ccgaggcgct cgccgccaac ggcctggagc
     3301 tggagaacgt cgccatcgtc gacctcgacc agaccagcct cgaatatttc gatccgtcga
     3361 acgccttcga cgccgaaggt ctgacccagc tcaccgaatc gatcgaaacg cggcgcaaga
     3421 tgcgcaacga gatcgagcag cgcaccctgg tcgaaatccg cagccagaac ctggaggcac
     3481 agaagaaggt cttcgagatc gaccgggaga ccgaatacgc gcggctcgag caggagcggg
     3541 aagtcgagtt ccgccgcgcg gtccagcgtt ccgagctgac ccgggagcgg gcgctgcgcg
     3601 agcaggaggc ggaggaggcg cagctctcct cgcgcgagtc ggtcgagaag gcgcggctgg
     3661 cccagcagcg cgcgatcacc gaggagcgca tcaggcatga agaggatacg cagcgccgcg
     3721 aaatcgcccg ccgccgggcg ctcgacgaag ccgagctcaa gacccgcgag cagaccgagc
     3781 gcgaacagat caacgtcgag ctgcagctcg aaacggcgcg catcgcacgc gagcgcgagc
     3841 agcgcgagct cgaaatcacc cggcagaagg cgcttgagat tctggagctc gaccggcaga
     3901 tcgctctctc cgaaaagacc ctgtcggtga tcaaggccga ggccgagaag cgccgcaccg
     3961 agatcgtcga gaaccagcat accgaggccg agcgcattgc ccaggaccgc gcgctcgacc
     4021 aggtgcggct cgagcgtgag cgccatctcg aggggctgca gatcgccaag cgccaggcgt
     4081 tcgaggaagc cgagatcgcg gcggccgagg aggtcgagcg cgcccgcatc gccaccgagc
     4141 gcggcatcga agaagcgcgc atcgccaagg atcgcgacat ccgcacgctc gcgaccgagc
     4201 gcgacaagct cgtcgagatc gcggagatgg ccaaggccat cgagctggcg aagaagggcg
     4261 cggagcgttc cgccgcgctc gctgcgtccg aggcggtgcg cgccaaggtc atcgaggccg
     4321 aggagcaggc gatcaccacc cgcgagcgag agattgccga acggcgcaag ctcaccgaca
     4381 tgatcgcggc acggcgcgag gccgaacgcg aggcgctgcg catcaccgcc aaggccgagg
     4441 ccgacatgaa ggcggcgaga agtttcgccg aggcgcagaa aatcgccgcc acagccgcgg
     4501 cggaagcgga gaagatccgc gcgctcgccg ccgccgagcg ctatcaggtt gacgccgccg
     4561 gcgcccggca gatcaacgag gcggagaacg tgctgagcca ggaggctcgc gccggccgcc
     4621 tgcgcgagaa gctcctggag cgcatcgagg ggatcgtgcg cgaaagcgtg cgcccgctcg
     4681 agaagatcga gggcatcaag atcctccacg tcgacggcgc cagcggcggt agttcccgcc
     4741 gcaatgtcac cgacgaggtg atcgattcgg ctttgcgcta ccgcgtccag gcgccgatga
     4801 tcgacaatct gatgcgcgag atcggcatcg aaggcggcag cctcgggcgc atgactgagg
     4861 tgcttcgcga tgccaaggac attgccgcct taacgcgcga cggcaaaaag ggcgcgaagg
     4921 agaagccggt gaagcccggc gaggacgatc gcgaccgc
//
LOCUS       DATMQB010000062         8311 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1257204, whole genome shotgun sequence.
ACCESSION   DATMQB010000062 DATMQB010000000
VERSION     DATMQB010000062.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8311)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8311)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8311
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1257204"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..566)
                     /locus_tag="VNY79_02120"
     CDS             complement(<1..566)
                     /locus_tag="VNY79_02120"
                     /inference="COORDINATES: protein motif:HMM:NF014647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HWX71276.1"
                     /translation="MARFPASTAACVAVAALLAAGPAPAQDSPLTVGAVYVGSVNDYG
                     YNRAMKDGLDHMRQNIPGLKLIEAENIPETAESERIMEGMIQQGAKLIFATSFGHQQF
                     AFNLAKRHADVFFEHAGGWMQAPNFGNFFGATQAAWFPMGVAAGKMTKSNTLGFVVGV
                     PIGYAIGNINAFELGARSVNPAAKTRVVV"
     gene            complement(625..1539)
                     /locus_tag="VNY79_02125"
     CDS             complement(625..1539)
                     /locus_tag="VNY79_02125"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX71277.1"
                     /translation="MNAAIIIGVVASSIMSGTSLLYATLGEIVGERSGVVNLGLEGIM
                     LIGASTGFAATAVTGNAYLGVAAAAFSGAAVNMIFAYLVVGRGANQLATGLTLMFFCF
                     GLSAMTGRPFVGTLITGLPRLPLFGLGSGGAAARLLSYDLLVYLAAPVALTVWWLLYR
                     TRWGLALRTTGESPAVAFAAGLRPERLRYQALVLAGLLGGIAGAHISVALTLTWAEGM
                     TAGRGFIAIALVIFAKWDPLWAIAGALLFGGAEGLQLQLQAAGAEVSPFIMNMLPYLL
                     TLLVLVVWGWSRRTAAPAALGRSFVGVE"
     gene            complement(1536..2576)
                     /locus_tag="VNY79_02130"
     CDS             complement(1536..2576)
                     /locus_tag="VNY79_02130"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX71278.1"
                     /translation="MQRDGATAWHLASAQAKAFALAALVAITVFALLLAAAGKDPLRA
                     YADTLVYVFGNAYGFSELLVRMTPLVFTAVAVALPARIGLINVGGEGQLYMGACLATA
                     GALALPDQPAFVLLPLLVMLGFIGGGLWALVPGVLRALHLVNETISTLLLNYVAPLIV
                     SYLIFGPWRDPQSSFYPQSPAFADAARLPSFLRSRVHAGLLLALACLALYWFVTARTR
                     FGLDMRAIGGNPEAARRLGIPVLGYILAVMFAAGGIAGLAGMAEVTAIQGRLVSELSP
                     GYGFVGFLVSWLARTTAGGILAMAFLFAVISSVGDILQITQGLPFAVVNILMAVILFI
                     VLGRQPARSTGR"
     gene            complement(2566..4107)
                     /locus_tag="VNY79_02135"
     CDS             complement(2566..4107)
                     /locus_tag="VNY79_02135"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX71279.1"
                     /translation="MTAIDRGPPLLEARGIVKRFGALLANDVAEFSVRAGEVVALLGE
                     NGAGKSTLAKILYGYYAADAGDILVNGERVAISAPSDCRALGVGMVFQNFTLVPALSV
                     FENVALFQPNLPAVVPRAELLKRMRRYADRFRLAVDPWAPVRQLAVGDQQKVEILKQL
                     LAGARVLILDEPTKVLAPQESEGLFRTIAELRGEGLGVVLITHKLHEVLACADRIVVM
                     RQGRIAGVLDRSEASEAGLLALMFGEAVARPVPPPRGERNKDAACALELAGVSTSGEG
                     GRTPLCALSLTVRSGEIVGVAGVSGNGQRELGDLISGLQWPAAGAKRLWGEEASHWSI
                     ARIRANGVAIIPEDALAFACVADLTVRQNLALGSGRRYRAGLGMNWDGVDADMQRSFV
                     RLGFARPPFAARAATLSGGNLQRLVLARELAHQPRLVVALYPTRGLDARSTMAVRALL
                     REARTRGAGVLVVSEDLDELFELSDRLLVLFHGAIAGEFEPQDFRAETVGPLMVGAEK
                     QSHAA"
     gene            complement(4428..4628)
                     /locus_tag="VNY79_02140"
     CDS             complement(4428..4628)
                     /locus_tag="VNY79_02140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2093 domain-containing protein"
                     /protein_id="HWX71280.1"
                     /translation="MPGEAEVKYLDGDFRVVRPGAFVRCAVTGLPIPLEELRYWSVEL
                     QEAYVSPEAVLQRHGSLYAGRS"
     gene            complement(4978..6489)
                     /gene="xseA"
                     /locus_tag="VNY79_02145"
     CDS             complement(4978..6489)
                     /gene="xseA"
                     /locus_tag="VNY79_02145"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009318 - exodeoxyribonuclease VII
                     complex [Evidence IEA];
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HWX71281.1"
                     /translation="MNEPRLNLPELTVSELSAALKRTIEDSYGYVRVRGELGKVSYHS
                     NGHVYFDLKDDRACIAGVIWRSTSARIKLKLEAGLEVVITGRVTTYPGRSQYQIVVET
                     LEPAGLGALMALLEERKRRLAAEGLFDEARKQLLPYIPGVIGVITSPTGAVIRDIPHR
                     LAERFPRRVLVWPVKVQGDGSAAEVAAAIAGFNALPERGALPRPDLIVVARGGGSLED
                     LWSFNEEVVVRAASQSLIPLISAVGHETDVTLLDFVADRRAPTPTAAAEMAVPVRSEL
                     MVDVGNLSRRALACWRRNQEARRSELRSAARALPDADEVLAVPRQRLDHAAAGLSRAL
                     RANAHIHRVSFSQTAGRLSPHLLRNNVERRRERYAAVAQRLRASAAANLEAYRTRNAR
                     QREQVGTLARRAGLAMDNYLEARWARCERDAQLLAAFSYRSVLARGFTLVRDKAGRPM
                     RTAAALALGAPIGIEFADGSASARVEAVQTTPRQEPARPRRRRDPGPGQGSLF"
     gene            6625..7944
                     /gene="purD"
                     /locus_tag="VNY79_02150"
     CDS             6625..7944
                     /gene="purD"
                     /locus_tag="VNY79_02150"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004637 - phosphoribosylamine-glycine
                     ligase activity [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HWX71282.1"
                     /translation="MNILLLGSGGREHALAWKMAASPLVDRLICAPGNAGIAREAECV
                     ALDIGDHAAVIAYCRQNSIDLVVVGPEAPLCAGIIDDLEAAGTKTFGPSRAAARLEGS
                     KGFTKDLCRTHGIPTATYERFRAAAPAKAYVRDRRAPVVVKADGLAAGKGVVVAVNVA
                     EAEAAIDMMFSGALGEAGGEIVVEEFLDGEEASFFALCDGETAIALASAQDHKRVGDG
                     DTGPNTGGMGAYSPAPIVDAATSARVMETIVLPTLRAMKAMGAPYKGVLFAGLMLTAA
                     GPQLIEYNVRFGDPECQVLMLRLMSDLIPALLASRDGVLKSLDLRWFPQAALTVVMAA
                     KGYPGTYARGSVIEGLDEAAAIEGVEIFHAGTKAEGGRIVANGGRVLNITALGHSVRE
                     AQSRAYEAISRIRWPEGFCRHDIGWRAVEREKQPSEQSQGPAARLSK"
     gene            7944..8117
                     /locus_tag="VNY79_02155"
     CDS             7944..8117
                     /locus_tag="VNY79_02155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HWX71283.1"
                     /translation="MHDQAVLAIRNFLAYGKGRHQAQFNLADCFSYALAKSCGARLLF
                     KGDDFAETDIAPA"
     gene            8179..>8311
                     /locus_tag="VNY79_02160"
     CDS             8179..>8311
                     /locus_tag="VNY79_02160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016920119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HWX71284.1"
                     /translation="MKSFALALGGGGARGLAHIAVLEALDEMGVKPAAIAGTSIGALV
                     "
BASE COUNT         1520 a         2809 c         2761 g         1221 t
ORIGIN      
        1 accaccacgc gggtcttcgc cgccggattg accgaacgcg ctccgagctc gaaggcgttg
       61 atgttgccga tggcgtagcc gatcggaacg ccgaccacga agccgagcgt attcgacttc
      121 gtcatcttgc cggccgctac gcccatggga aaccaggcgg cctgggtggc accgaagaag
      181 ttgccgaaat tcggcgcctg catccagccg ccggcgtgct cgaagaagac gtccgcatgc
      241 cgcttggcga ggttgaaggc aaattgctga tggccgaagc tggtggcaaa aatgagcttc
      301 gctccctgct ggatcatccc ctccatgatc cgttccgact cggccgtctc gggaatgttc
      361 tccgcctcga tgagcttgag cccggggata ttctgtctca tgtgatcgag accgtccttc
      421 atggcgcggt tgtaaccgta atcgttgacg ctgccgacat agaccgctcc aaccgtcagc
      481 gggctgtcct gcgccggtgc cggaccggcc gcgagcaagg cggcgaccgc cacgcaggcg
      541 gctgtcgatg ccggaaatcg tgccatggtc ttctcctctg tcccgcagcg gcgccacgcc
      601 gctgcgcctg cgcatcggcg cggcctattc cacgccgaca aagcttcggc cgagtgccgc
      661 cggagcggcc gtccgccgac tccagcccca gacgacgagc accagcaagg tgagcagata
      721 aggcaacatg ttcatgatga agggtgagac ctcggcgccg gcggcctgaa gttgcagttg
      781 caggccctcg gcgcccccga acaggagtgc cccggcaatg gcccagagcg gatcccattt
      841 ggcgaagatc actagcgcaa tggcaatgaa gccgcggccg gcggtcattc cctcggccca
      901 ggtgagcgtc agcgccaccg aaatatgcgc gcctgcaatc ccgccgagca ggccggctag
      961 gaccaaggcc tgatagcgca gccgctccgg gcgcaagcct gccgcaaatg ccacggccgg
     1021 gctctcgccg gtggtgcgca gagcgagccc ccatcgggtt cggtagagca gccaccacac
     1081 ggtcagcgca acaggcgcgg cgagatagac gagcaagtcg tagctcagca gccgcgcggc
     1141 cgccccaccc gagccgaggc cgaacagcgg caatcgcgga agtcccgtga tcaacgtgcc
     1201 gacgaacggc cggccagtca tcgcgctcaa gccgaagcag aagaacatca gagtgaggcc
     1261 ggtcgcgagc tgattggcgc cgcggccgac aaccaaatag gcaaagatca tattgacggc
     1321 cgctccggaa aaagcggcgg cggcgacgcc cagatacgcg ttgccggtca cggccgtcgc
     1381 ggcaaatccg gtcgacgcgc cgatcaacat gatgccttcg aggcccagat tgacgacgcc
     1441 cgatcgctcg ccgacgattt cgccgagcgt cgcatagagg agcgatgtcc ccgacatgat
     1501 cgagctggca acaacgccga taatgatcgc ggcgttcatc gtcccgtgct cctcgccggt
     1561 tggcggccca gcacgatgaa caggatgacc gccatcagga tattgacgac ggcgaacggc
     1621 agcccctgcg tgatctgcag aatgtcgccg accgagctga tgaccgcgaa gaggaacgcc
     1681 atggcgagaa ttccgccggc ggtggtgcgg gcgagccacg acacgaggaa gccgacgaag
     1741 ccgtagcccg gcgacagctc ggataccagg cggccctgga tggccgtgac ttccgccatc
     1801 ccggcaagcc cggcgattcc gcccgcggcg aacatcacgg ccaggatgta gcccaggacc
     1861 ggaatgccga gacgccgcgc ggcttcagga tttccgccga tcgcccgcat gtcgaggccg
     1921 aagcgcgtgc gcgcggtaac aaaccagtag agcgcaaggc aggcgagcgc gaggagcagg
     1981 cccgcatgca cgcgcgaccg gaggaagctc gggagccggg ccgcgtcggc gaaagccggt
     2041 gattgcggat aaaaggaact ctgaggatcg cgccacggcc cgaaaatgag atagctcacg
     2101 atcagcgggg ccacgtagtt gaggagcagc gtcgagatcg tctcgttgac gagatgaagc
     2161 gctcgcagca cgccgggcac cagcgcccac aggccgccgc cgatgaatcc gagcatgacg
     2221 aggagcggca gcaggacgaa agccggctga tcgggcagcg ccagcgcgcc ggcggtggca
     2281 aggcaagcgc ccatataaag ctggccctcg ccgccgacat tgatcaagcc gatgcgcgcc
     2341 ggtagcgcca ccgcgacggc ggtgaaaaca agcggagtca tccgcaccag aagctcggag
     2401 aagccatagg cattgccgaa cacgtagacg agcgtgtcgg cgtaggcgcg cagcggatcc
     2461 ttgcccgcgg cggctagcag gagcgcaaag acggtaatcg ccaccagcgc ggcgagcgcg
     2521 aaggccttgg cctgcgccga agcaagatgc cacgcggtcg cgccgtcacg ctgcatggct
     2581 ttgcttctcg gcgccgacca tgagggggcc gaccgtctcc gcgcgaaaat cctgcggttc
     2641 gaactcgccg gcgatcgcgc cgtgaaacag caccagcagc cgatcgctca attcaaacaa
     2701 ttcatcgaga tcctcggaca ccaccagcac gccggcgccg cgggtgcggg cctcgcgcag
     2761 caaggcgcga actgccatgg tgctgcgcgc gtcgaggccg cgcgtcggat agagcgcgac
     2821 cacaagcctc ggctggtgcg cgagttcgcg agcaagcacc agacgctgca gattgccgcc
     2881 ggaaagcgtg gcggcccgcg ccgcgaacgg cggacgggca aaccccaagc ggacgaagct
     2941 gcgctgcatg tcggcgtcaa cgccgtccca gttcatgccc agcccggcgc ggtatcgccg
     3001 cccgctgcca agcgccagat tttgccgcac cgtcaagtcg gcgacgcagg cgaacgcaag
     3061 cgcatcttcc ggaatgattg ccaccccgtt cgcgcgtatc ctggcgatcg accagtgcga
     3121 ggcctcttcg ccccacagtc gtttcgctcc ggcggcaggc cactgcaggc cgctgatgag
     3181 atcgccaagc tcgcgctggc cattgcccga tacgccggcg acgccgacaa tctcacccga
     3241 gcgcacggtc agtgaaagag cacacaacgg cgtgcgccca ccctccccgg aagtcgatac
     3301 gccggcgagt tcaagcgcgc aggccgcgtc cttgttgcgc tcgccgcgcg gcggcggcac
     3361 cgggcgcgcc accgcctcgc cgaacatcag cgcaagcagg cccgcctcgg acgcctcgct
     3421 ccggtcgagg acgccggcga tgcgaccctg ccgcatgacg acgatccgat cggcgcaggc
     3481 aagaacctcg tggagcttgt gagtgatcaa cacgacgccc agcccctcgc cccgcagctc
     3541 ggcgatggtt ctgaacaatc cctcgctttc ctgcggggcc agcaccttgg tcggctcatc
     3601 cagaatgagc actcgggcgc cggcgagcag ctgcttgaga atctcgacct tctgctggtc
     3661 cccgaccgca agctgccgca ccggcgccca gggatcgacg gcgaggcgaa accgatcggc
     3721 atagcggcgc atgcgcttaa gtagctcggc gcgcggcacc acggccggaa ggttcggttg
     3781 gaacaacgcc acattttcga acacgctcag cgccgggacg agcgtaaaat tctggaagac
     3841 catgccgacg ccaagcgcgc ggcaatcgct tggcgcggaa atcgcgacgc gctcgccgtt
     3901 caccaggatg tcgccggcat cggccgcgta gtagccgtac aggattttgg cgagcgtgct
     3961 tttgccggcg ccgttctcgc cgaggagcgc aacgacctcg ccggcacgca cgctgaactc
     4021 ggcgacgtcg ttggcgagca acgcaccgaa ccgcttgacg atgccgcgcg cttcgaggag
     4081 gggcggcccg cgatcgatgg cggtcatggc cgcggcggat ctgcgctgcg atttattcgc
     4141 cgcaccagcc ggcagtctgc ctctttattg tgcgcaaggc caagccgccc tgcggacacg
     4201 atcacgaccg cgaccccggt gcggcccggc gccaagcgag acgacaaggc attgacggtg
     4261 cacatggaaa cagtctctgc cgcttggttc gcgtcgcctg cgatggcaag gccgatactg
     4321 caaagtgggg caagtatcgt gccgcgcagc cgcacaacaa ggatgcagcg gccgcggtcc
     4381 gccgagcggc ttgcggttgg gcgaaacgca acgaggaatg ccggatttta cgatcttccc
     4441 gcgtacaagg atccgtgccg ctgcagcact gcctccggcg aaacgtaggc ttcctgcagt
     4501 tcgacgctcc agtatctgag ttcctcgagc ggaatgggca ggccggtcac ggcgcaacgc
     4561 acgaacgcgc ccggccgcac gacgcggaaa tcgccgtcga gatatttgac ctcggcctcg
     4621 ccgggcatgg gggatgggcg atcggtacga ttgagcaact gaacctccgt cgcggatgcg
     4681 actcgcctgc ggcctgcgcg tcgggcaaca taatcactct acgctgagga cggaacaccc
     4741 gcttcgcgac ccggcgcgcc gctgcgttcg accggtcgcg ccgatctcaa tcggtcgagg
     4801 gcaagccgtt tgccggcagc ccccgctagc agacattgtc aacgaaagag ccgcaccgac
     4861 cgaagtcagc gcggccagga gcaatgcacc gtcatcgtgc aggcgctctg cccgattcac
     4921 gtcggcctga accgtagccg cgtgctgtcg tggcgatcgc tgcggcggcg gttcgcgtta
     4981 gaacaagctg ccttgtcccg ggcccggatc gcgccgacgg cgcggccgcg ccggctcctg
     5041 acgcggcgtc gtctgcaccg cctcgactcg cgcgctggca ctgccgtcgg cgaattcgat
     5101 cccgattggc gcgccaagcg cgagcgcggc ggctgtgcgc atgggccggc ccgccttgtc
     5161 gcgcaccaac gtaaagccgc gagccagaac gctgcgatag gagaaggcgg caagcagctg
     5221 ggcgtcgcgc tcgcatcgcg cccagcgcgc ctccaagtag ttgtccatcg caagcccggc
     5281 acgcctggcc agagtgccga cctgctcgcg ctggcgcgcg ttgcgggtgc gatacgcctc
     5341 gaggttcgcg gcagcgctgg cgcgaagacg ctgcgcaaca gcggcgtaac gctcgcgccg
     5401 acgctcgaca ttgttgcgca aaagatgcgg gctgagcctg ccggcggtct gcgaaaagct
     5461 cacgcggtga atgtgcgcgt tggcacgcag tgcgcggctg agcccggcgg cagcatgatc
     5521 gagccgctgc cgcggcaccg ccagcacctc gtcggcgtca ggcagggcgc gagccgccga
     5581 tcgcagctcg ctgcgccgcg cttcctggtt gcgccgccag caagcgagcg cacgccgcga
     5641 caaattgccg acgtcgacca tgagctcgga cctcaccggc accgccatct cggcggcggc
     5701 tgtcggcgtc ggcgcccggc ggtcggcgac aaaatcaagg agcgtcacgt cggtctcatg
     5761 cccgaccgcg gagatcagcg gaatgaggct ctgcgaagct gcgcgcacca cgacctcttc
     5821 gttaaacgac cacaaatcct caagcgagcc gccgccgcgc gcgacgacga tgagatcggg
     5881 ccgcggcagc gcgccgcgct cgggcagcgc gttgaagcca gcgatggcgg cggcgacctc
     5941 ggcggctgag ccgtcgccct gcaccttgac cggccagacc agcacccggc gcggaaaacg
     6001 ctcggcaagc cggtgcggaa tgtcgcgaat gacggcgccg gtcggcgacg tgatgacgcc
     6061 gatcaccccc gggatgtaag gcaggagctg ctttctcgcc tcgtcgaaca atccttccgc
     6121 ggcgagccgc cgcttgcgct cttcgagcag cgccatgagc gcgccaaggc cggccggctc
     6181 cagcgtctcg accacgatct ggtactgcga gcgccccgga taggtggtca ctcgcccggt
     6241 aatcacgact tcgaggccgg cttcgagctt gagcttgatg cgcgctgatg tgctgcgcca
     6301 gatgacgcca gcgatgcagg cgcgatcgtc cttgagatcg aaatagacgt gcccgttgga
     6361 gtgatagctc accttgccga gctcgccgcg cacgcggaca tagccgtagg agtcctcgat
     6421 cgtacgcttg agcgccgccg aaagttcgga gacggtcaat tccggcaggt tgaggcgggg
     6481 ctcgttcatg gccgcatgat tcgctcaggg actggctgtt agagatgggt ttcgtgggcg
     6541 gtggtcaagc ccgggcgccc cccgccacaa tgttgcgccg gcgccctgcc gtgctagagg
     6601 ggcacccgcg atgtgctgca acccatgaac atcctgctcc ttggctccgg cggccgcgaa
     6661 catgcgctcg cctggaagat ggcggcaagc ccgctcgtag accggctcat ctgtgccccg
     6721 ggcaatgcgg gcatcgcgcg tgaggcggag tgcgttgccc tcgatatcgg cgaccatgcg
     6781 gcggtgatcg cgtattgccg tcaaaacagc atcgatttgg tcgttgtagg gcccgaggcg
     6841 ccgctctgcg caggcatcat cgatgacctc gaagccgccg gcaccaagac cttcggcccg
     6901 agccgcgccg ccgcccgcct cgaaggctcc aagggcttca ccaaggactt gtgcaggacg
     6961 cacggcattc ccaccgcgac ctacgaacgc ttccgcgcgg cggcgccggc caaggcctat
     7021 gtccgcgacc gccgcgcgcc ggtcgtcgtc aaagccgacg ggcttgccgc cggcaagggt
     7081 gtcgtcgtgg cggtgaatgt ggccgaggcg gaagcggcga tcgacatgat gttcagcggc
     7141 gccctgggcg aggccggcgg cgaaatcgtc gtcgaggaat tcctcgacgg cgaggaagct
     7201 tccttcttcg cgctatgcga cggcgagacc gccatcgcgc ttgcctcggc gcaggatcac
     7261 aagcgcgtgg gcgacggtga tactggtccg aacaccggcg gcatgggcgc ctattcgccg
     7321 gcgccgatcg tcgacgcggc gacatccgcc cgtgtgatgg agacgatcgt gctgccgacg
     7381 ctgcgcgcca tgaaggcgat gggggcgcct tacaagggcg tgctctttgc cgggctgatg
     7441 ctcaccgccg cgggaccgca gctcatcgaa tacaacgtcc gtttcggcga tcccgaatgc
     7501 caggtgctga tgctgcgcct gatgtcggat ctcattccgg cgctgctcgc gagccgggac
     7561 ggcgttctca agtcgctcga cctgcgctgg tttccgcaag ccgcgctcac cgtggtgatg
     7621 gccgctaaag gctacccggg cacttatgcc agaggctcgg tcatcgaagg ccttgacgag
     7681 gccgccgcca tcgagggcgt ggaaatcttc cacgccggca ccaaggcaga aggcggccgc
     7741 atcgtcgcga acggcggccg ggtgctcaat atcacggcgc tcgggcacag cgtgcgcgag
     7801 gcgcagtcgc gcgcctacga ggccatctcc cgcatccgct ggccggaagg cttttgtcgc
     7861 cacgatatcg gctggcgggc agttgagcgt gaaaagcagc cgagcgaaca atcacaagga
     7921 ccagcagcga ggttgtcgaa gtgatgcacg atcaagctgt gctcgccatc cgcaacttcc
     7981 ttgcttatgg caaaggccgt caccaggcgc agttcaattt ggcggactgc ttctcctatg
     8041 ccctcgccaa atcatgcggc gcgcggctcc tcttcaaggg cgacgatttt gcggagaccg
     8101 acatcgcgcc ggcatgacgg ccatagcagc accgccacaa cggcaaaaac cgtcagcagg
     8161 agatgaaagt aagccggcat gaagagtttc gccctcgcgc tcggcggcgg cggcgcccgc
     8221 ggcctcgccc atatcgcggt gctcgaggcg ctcgacgaga tgggcgttaa gcccgccgcc
     8281 atcgccggca cctcgatcgg cgcgctggtc g
//
LOCUS       DATMQB010000063        10927 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2188203, whole genome shotgun sequence.
ACCESSION   DATMQB010000063 DATMQB010000000
VERSION     DATMQB010000063.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10927)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10927)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10927
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2188203"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..965)
                     /locus_tag="VNY79_02165"
     CDS             complement(<1..965)
                     /locus_tag="VNY79_02165"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX71285.1"
                     /translation="MLEQAAHPAPPPLSLTGRPHALRLGRINLEVRQSIPAWRQALIL
                     AGAVIAGMAISAALLIAAGVKPRALLDEFVVETLTDSENLHSILFQAAPLIFVGVGAA
                     VAFRVRFWNLGIEGQMIWGGIAATFIAFYEIGPPVTRLALMMLSAALAGMAWIMIPTW
                     LRLRLRVNEIITTLLLNYVALNFLLHLVYGPWLDPKDAFPHSPQFHSYERLPEIGWGL
                     SSALVMALVFTALAAWLVQSTRFGFYTRFVHDNPRMALAVGVPIKAVMLISVLLSGGL
                     SALAGFVIATAQEGRLTQSFFEGYGFSGILIAFLARNNPIAAMIVA"
     gene            complement(958..2460)
                     /locus_tag="VNY79_02170"
     CDS             complement(958..2460)
                     /locus_tag="VNY79_02170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012456059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX71286.1"
                     /translation="MVAALKLVGVRKSFDGFLALDDADFAANTGEVHALLGENGAGKS
                     SLMNVAAGLYTAEAGRLFVDGEEVVLSGPRDAMACRIGMVHQEFKLVKPFTVAENVLL
                     ANWRGRFAPGLREVERQITTQAAELGFAIDPRSRVDELSIAERQRVEIIKVLLAGARI
                     LILDEPTAVLTDEEAVRLLTTVRTLAARGAAVVLVTHKLGEVTAFTDRVTVMRNGRAV
                     AVLDSRSTTANELTQLAVGTTVAQPRRASSPPGAPVMTVKGLRAARADGYVTVTDATF
                     HVRAGEIYGIAGVGGNGQTELVEALTGVRAPLAGSVELDGTGDTTGSPAEALRDLGVA
                     SIPADRFGYGLAGGLSVADNFCVGQMHKGCYGTWLRTDSAAMRKATGRAVGEFDVQGV
                     RNLRQKAALLSGGNAQKLIIAREFSRDPKVIIAHSPSRGLDVRACAAVQERLLSARAG
                     GAAIVLISDDLDEVLNLSDRIGVMTRGRIAAEFAAPADRQAVGRVMVHHA"
     gene            complement(2526..3611)
                     /locus_tag="VNY79_02175"
     CDS             complement(2526..3611)
                     /locus_tag="VNY79_02175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012456060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HWX71287.1"
                     /translation="MFNRLVLIAGAAALVAAGSAWSADGFSLKGEPKIAFLYFKAKND
                     GGWTQAFDEAKPKIEATMKQQIPYVENIAEDAAQITPPAEKFIQRGYNVIVGTAFGYS
                     DTFKELAAKHPEVAFLNAAGTTNGTNLQSFYGRTYESQYLCGMVAGAMSKSGKLGFVG
                     ANPFGIVNWTVNAYELGAKKTNPKATLTAVFTGAWNDPVKERAAAEALADQGVDVIGM
                     HVDTPTVQIVAQERGIYGTGHHRDLREFAPKATVCSSIWVWDRYLVPELKKVAGGNWQ
                     TSPYGDFIAIKDGGTDIACCGPMVPKDVVDKVMAERQAIIGGKHVYAGPLKDRDGKER
                     AASGQVLADGDLWKMDWYVDGVITQKK"
     gene            complement(3711..6104)
                     /gene="cutA"
                     /locus_tag="VNY79_02180"
     CDS             complement(3711..6104)
                     /gene="cutA"
                     /locus_tag="VNY79_02180"
                     /EC_number="1.2.5.3"
                     /inference="COORDINATES: protein motif:HMM:NF040766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aerobic carbon-monoxide dehydrogenase large
                     subunit"
                     /protein_id="HWX71288.1"
                     /translation="MSTRQFGARVERNIDPKLLRGEGAFVDDIPLPQALHAAFVRSPF
                     ARARIRSINTAAAERHPGVAVVYTCENIGDLDLDMPLLIPHPSMKHPHTQRPLARGDV
                     YYVGQCVAMVVAVDRYVAEDAAALIEVDYDPLDVEMDLEKAVRDGAPLVHADATNNLA
                     AHFVQVSGNPDDAFAKAEHITKIRVQIDRSTAAPMECRAIAASWDQVSEELTVWDGTQ
                     APISLRGGLSSILKLDEDKVRVIAPNVGGGFGQKIMMFHPDELLVPMAAMKLGRPVKY
                     IEDRRENFIGSSQERTQIHYLELAAKKTGEVLGLRDSFLHDTGAFIPYGIAVAQVAST
                     SIAGAYRIPNIWVEFKAVYTPAVQVTPYRGCGRPHACFAIERAMDQLAEELGLDRFEI
                     RRRNFIGENEFPYPREGLLFADGLRVTLDSGQYHKALDMMGKALDVTNLAAAKERARR
                     DGKYLGLGLAFYVEGTGLGPYEGGHVRIHPITGKVYVNTGLTSQGQGHDTVFAQIVAD
                     QLGVNPQDVIVVEGDTKAYDWGVATFASRAAVVSGNAIHKTAMVVREKTLKAAANMME
                     VDVTDIELHDGAAWVKGSNRFVPLAAVATATNPLRYAFNEAAQAATQFAPASRHDGPP
                     LAEGQAPGLEGTDYYSPPHATWAYGVHGALVEVDPDLCTVKIQKYVCIHDCGNMINPM
                     IVEGQVHGGIAQGLGGALYERLEYEPSGNLANANFVDFLVPYATEIPNIEVLHLETPS
                     PLNPLGVKGVGEAGCIAVGAVVASAVEEALKPLGAGKFHHVPLTPSMIQAALDRAGA"
     gene            complement(6119..6649)
                     /locus_tag="VNY79_02185"
     CDS             complement(6119..6649)
                     /locus_tag="VNY79_02185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018328802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HWX71289.1"
                     /translation="MTRGNLQRRLAQTSDDPTLEVSLTVNGERVERVVSVRMLLSDFL
                     RHELRLTGTHVGCEHGICGCCTVLIDGKSGRSCLTLVAQAQGAEVTTIEALAAEDGRL
                     HAIQQAFKECHALQCGFCTPGMIMNIFGRFNEPQALDLTDDGIRTMLSGNLCRCTGYV
                     NIIAAVRRAAQLAGRA"
     gene            complement(6646..7524)
                     /locus_tag="VNY79_02190"
     CDS             complement(6646..7524)
                     /locus_tag="VNY79_02190"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HWX71290.1"
                     /translation="MKPPLFRYQAPRTLKEAVVALASDPDAMVLAGGQSLLPAMNFRL
                     ANPSLLVDIQHVAELKGIAIEGGQIIVKAMTRHRELELDERVRAANPLLNEAMAHVAH
                     IPIRNRGTVVGSLCHADGAAEVPLVLVLLGGSVLVEGPAGRREIAADEFFRFHLTTTR
                     RRDEIAFEARFPVLRADSGSAFDEVTRRHGDYAIAGVGAVVRMNADGRTSEVRLAACG
                     VTSRPIRLPEAEKLLTGTALSEADLKAAGRAAAEAVTAPDDMHASNAYRRRAVATLVR
                     RMAAKAVTRARERIGR"
     gene            7683..8549
                     /locus_tag="VNY79_02195"
     CDS             7683..8549
                     /locus_tag="VNY79_02195"
                     /inference="COORDINATES: protein motif:HMM:NF013757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HWX71291.1"
                     /translation="MTMQRGLPDRFPPSAAARAARLGRKPKQAPLKANGVEDLRGMAR
                     ALAIIEHLAVRPGRVVDVTHDLRLPWATVHRIIAQLTKADFLRRDPETKRYEIGPALW
                     FAGATYMANHRVLRAALPYLHKAEQISGIAVQLAERVGRQAVAIYSAQPYATNIAKAQ
                     YGYHFPLHCGSKGRVLLAFAGPEFVKQYLHRPLEKLTDATLTDPDELRRELERIRQSG
                     YSITVADVQPFTGSMAAPIRDASGTVVASLCFIARKTLIQNVQRRDTLLEHLLHAAHL
                     ASMDLGWRPDPV"
     gene            complement(8567..9346)
                     /locus_tag="VNY79_02200"
     CDS             complement(8567..9346)
                     /locus_tag="VNY79_02200"
                     /inference="COORDINATES: protein motif:HMM:NF014670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HWX71292.1"
                     /translation="MERRMSSMTQMEIAKVIEARKPVILPTGATEAHGPHMPTDTDTH
                     QVEHIALELSARIDAVVAPPVAYGISKTFEFFPGTISLSIPTYQTMVFEIGAALIRQG
                     FHHLIILNGNRPNGTANDAVARHLVDELDRSFDFVVSAVSYWEPAADRIHAMRKSVVG
                     GMGHGCELETSFQLATRPQLVKMAELATAKYGPVGWDLVAPTNPTRTYMRRPRPDAGH
                     AAIFGDPTKATAESGKAFIAAAVDALAETFKNLQGSYQERR"
     gene            9436..9993
                     /locus_tag="VNY79_02205"
     CDS             9436..9993
                     /locus_tag="VNY79_02205"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HWX71293.1"
                     /translation="MRITRSFTVARPAAAVWAFFQDVPAVASCLPGAELVESRDDRVQ
                     RGRVGISLGPFKASFEGEATIKTDPATRSGHVEGRGVDKRGGSHSRMTLDYRLNDDAG
                     ATRVDIDVDLTLAGPIAQFGRSGLVTETANVLIADFARNLEDRISTSARTAGNVAQPA
                     RRINVLAVLLEAVRTRIRILFGRQT"
     gene            complement(10016..10501)
                     /locus_tag="VNY79_02210"
     CDS             complement(10016..10501)
                     /locus_tag="VNY79_02210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71294.1"
                     /translation="MLIGGIALWALRSLRRGRQLEKSLAEATLDRDAKTHWFTLEIVM
                     RNLQRHPLLVRSVEIIDPPGTKICDRWQAWRPETASVKFVAPELDLTDSASIETTIFP
                     YNSNDYANQADELIRHFYVRPPDAEAAPPLALRARLICELQTRRGRRQELTFRRTLTA
                     A"
BASE COUNT         1907 a         3571 c         3551 g         1898 t
ORIGIN      
        1 gcgacgatca tggcggcgat cgggttgttg cgggcaagaa aggcgatgag gatcccggaa
       61 aagccgtagc cctcgaagaa agactgggtg agccgtccct cctgggccgt ggcgatgacg
      121 aagccggcga gcgcggataa gccgcccgac aacagcaccg aaatcagcat caccgccttg
      181 atcggcacgc cgaccgccag cgccatgcgc ggattgtcgt gcacgaaccg ggtgtagaag
      241 ccgaaccgcg tggactgcac cagccaggcg gcgagcgcgg tgaagacgag cgccatgacc
      301 agcgcactgc tgagccccca accgatctcc ggcagccgct cgtaggagtg gaactgcggc
      361 gagtggggaa acgcgtcttt cggatcgagc cacggaccgt agacaagatg gagcaggaaa
      421 ttgagcgcca cgtagttgag cagcagggtg gtgatgatct cgttgacccg cagacgcagc
      481 cgcagccagg tgggaatcat gatccaggcc atgccggcga gggcggctga cagcatcatc
      541 agcgcaaggc gcgtgaccgg cgggccgatc tcgtagaacg cgatgaaggt ggcggcgatg
      601 ccgccccaga tcatctggcc ttcgatgccg agattccaga agcgcacgcg gaaggcgacg
      661 gcggcgccga cgccgacgaa gatcagcggc gccgcctgaa acaggatgga gtggagattc
      721 tcggaatcgg tcagcgtttc gacgacgaac tcatcgagca aagctctcgg cttcacgccg
      781 gccgcaatca gcagcgccgc cgatatcgcc attccggcga tgacggcgcc ggcgagaatg
      841 agcgcctgac gccacgccgg aatgctctgc cgaacctcga gattgatccg gccgagacgc
      901 agcgcgtgcg gacggcctgt caggctcagg ggcggcggtg ccgggtgagc ggcctgctca
      961 agcatggtgc accatcacgc gtccgaccgc ctgccggtcc gccggcgccg cgaactcggc
     1021 ggcaatgcgg ccccgcgtca tgacgccgat ccggtcggac agattgagga cttcgtcgag
     1081 gtcgtcgctg atcagcacga tcgcggcgcc gccggcgcgc gcgctgagca ggcgctcctg
     1141 caccgcggcg caagcgcgga catcgaggcc gcggcttgga ctgtgggcaa tgatgacctt
     1201 ggggtcgcgg ctgaactcgc gggcgatgat cagcttttgc gcgttgccgc cggagaggag
     1261 cgccgccttc tggcgcagat tgcgcacgcc ctggacatcg aattcgccca ctgcccgacc
     1321 ggtcgccttg cgcatcgccg cactgtcggt gcgcaaccag gtgccgtagc agcctttgtg
     1381 catctgaccg acgcagaaat tgtcggcaac cgacaagccg ccggcgagac catagccgaa
     1441 gcggtcggcg ggaatggagg caacgccgag atcgcgcaac gcttcggccg gcgagccggt
     1501 cgtgtctccc gtcccgtcga gctcgaccga tccggcgagc ggggcccgca cgccggtcag
     1561 cgcctccacc aattccgtct ggccgttgcc gccaacgccg gcgatgccgt agatctcgcc
     1621 ggcgcggaca tgaaaggtcg catccgtgac cgtcacatac ccgtcggcgc gcgccgcccg
     1681 caagcctttg acggtcatca ccggcgcgcc gggaggcgac gaggcgcgac ggggctgagc
     1741 gacggtggtg ccgaccgcaa gctgggtcag ttcgttggcc gtggttgagc gcgaatcgag
     1801 caccgcgacg gctcgcccgt tgcgcatcac cgtgacccga tcggtgaacg cggtcacctc
     1861 gccaagcttg tgagtcacca gcacgacggc ggcgccacgg gcggcgagcg tccgcaccgt
     1921 ggtgagaagg cgcacagcct cctcgtcggt gaggaccgcc gtcggctcgt cgaggatgag
     1981 gatgcgggcg cccgccagca gcaccttgat gatctcgacc cgctgccgct ccgcaatcga
     2041 cagttcgtcg acgcggctgc ggggatcgat cgcaaagccg agctcggcgg cttgggtcgt
     2101 gatctgtcgc tcgacctcgc gaagacccgg tgcgaaacgc ccgcgccaat tggcgagcag
     2161 cacgttttcg gcgacggtga acggcttcac cagcttgaat tcctggtgca ccattccgat
     2221 gcggcaagcc atcgcatcgc gcgggccgga gagcacgacc tcttcgccgt caacgaagag
     2281 ccgcccggcc tccgcggtgt agaggccggc ggccacgttc atcagcgacg atttgccggc
     2341 gccgttctcg cccaagagcg cgtggacctc gccggtgttg gccgcgaaat cggcgtcgtc
     2401 gagggcaaga aatccgtcga aagacttcct gaccccaacg agtttcaggg ccgcgaccat
     2461 ttcgatccaa gctccaggcg tggacgcggc cgagccatca acgcggccgc gtcgcccact
     2521 cggggtcact tcttctgagt aatgaccccg tcaacgtacc agtccatttt ccacaggtca
     2581 ccgtccgcca ggacctgccc ggaagcggcg cgctccttgc cgtcgcgatc cttgagcggg
     2641 ccggcgtaga cgtgcttgcc gccgatgatc gcctgccgct ccgccatcac cttgtcgacc
     2701 acgtccttcg gcaccatggg gccgcagcag gcgatgtcgg tgccgccgtc cttgatggcg
     2761 atgaaatcgc catacggact ggtttgccag ttgccgccgg cgaccttctt cagctccggg
     2821 accagataac gatcccacac ccagatcgag gagcagaccg tcgccttggg agcgaactcg
     2881 cgcagatcgc ggtggtgccc ggtgccgtag atgccgcgct cctgagcgac gatctgcacc
     2941 gtcggggtgt cgacatgcat cccgatcacg tcgacgccct gatcggcgag cgcttcggcg
     3001 gcggcgcgct ccttcaccgg atcgttccac gcgccggtga agaccgcggt cagcgtcgcc
     3061 ttcggattgg tctttttggc gccgagctca taggcattga cggtccagtt gacgatgccg
     3121 aacggattgg cgccgacgaa gccgagcttg ccggatttcg acatggcgcc ggccaccatg
     3181 ccgcagagat attggctctc atacgtcctg ccgtagaacg actgtaggtt cgtgccgttg
     3241 gtggtgcccg ccgcattgag gaaggcaacc tccggatgct tggccgcaag ctccttgaaa
     3301 gtgtcggaat agccgaacgc cgtgccgaca atgacgttgt agccgcgctg gatgaatttc
     3361 tccgccggcg gcgtgatctg cgccgcatcc tcggcgatat tttccacata ggggatctgc
     3421 tgtttcatgg tggcttcgat cttgggcttg gcttcgtcga aggcctgggt ccagccgccg
     3481 tcgttcttgg ctttgaaata gaggaacgcg atcttgggct cgcccttgag cgagaacccg
     3541 tccgcgctcc aggcggagcc ggccgcaacc agcgcagccg ctccggcgat gagcaccaac
     3601 ctgttgaaca tctgtccgtc tcctctggct acgaccgacg gcccgtgccg gcggctacta
     3661 ctaagcgtta cactccccgc acgcgaagcc gcccggccgc ggctctcacg ctatgcgccg
     3721 gcgcgatcga gcgccgcctg aatcatgctc ggcgtcagcg gcacatgatg gaatttgccg
     3781 gcgccgagcg gcttgagcgc ttcctcgacg gccgacgcca cgacggcgcc gaccgcgatg
     3841 cagccggctt cgccgacgcc tttcactccc agcggattga gcggcgacgg cgtttccaga
     3901 tgcaacacct cgatgttcgg gatttcggtc gcgtagggta cgagaaaatc cacgaaattc
     3961 gcattggcca agttgccgct gggttcgtat tcgagccgct cgtagagcgc gccgccgagc
     4021 ccctgggcaa ttccgccgtg cacctgtccc tccacgatca tcgggttgat catgttgccg
     4081 cagtcgtgga tgcacacgta tttttggatc ttgaccgtgc acagatcggg gtcgacctcg
     4141 accagggcgc cgtggacgcc gtaagcccag gtcgcgtgcg gcgggctgta atagtcggtg
     4201 ccttcaaggc cgggcgcctg cccctccgcc aagggcggtc cgtcatggcg gctcgcggga
     4261 gcgaactggg tcgccgcctg cgccgcttca ttgaaggcat accgcagcgg gttggtcgcc
     4321 gtcgcgacgg cggcgagcgg cacgaagcgg tttgaaccct tcacccaggc cgcgccgtcg
     4381 tgcagctcga tgtcggtgac atcgacttcc atcatgttcg ccgccgcctt cagcgtcttc
     4441 tcgcgcacca ccatcgcggt cttgtggatg gcgttgccgc tgacaacggc ggcgcggctg
     4501 gcaaacgtcg ccacacccca atcgtaggcc ttagtgtcac cctcgaccac gatcacgtcc
     4561 tgcgggttga cgccgagctg gtcggcgacg atctgcgcga acaccgtgtc gtggccctgt
     4621 ccctgcgagg ttagccctgt gttcacgtac accttcccgg tgatcgggtg gatgcgcacg
     4681 tggccgccct cgtacggtcc gaggccggtg ccctcgacat agaaggcaag tccgaggcca
     4741 aggtatttgc cgtcacggcg ggctctctcc ttcgcggctg cgaggttcgt cacgtccagc
     4801 gccttgccca tcatgtcgag ggccttgtgg tactggccgc tgtcgagcgt gaccctgagg
     4861 ccatcggcaa acaacagacc ctcgcgcgga taggggaatt cattctcgcc aatgaaattg
     4921 cgccggcgta tctcaaaacg gtcgaggccc agttcctccg cgagttggtc catggcgcgc
     4981 tcgatcgcga agcaggcgtg gggccgcccg catccgcggt acggggtcac ctgaaccgct
     5041 ggcgtataga cggccttgaa ctcgacccag atgttgggga tgcggtacgc acccgcgatc
     5101 gaggtcgacg ccacctgcgc gaccgcaatg ccgtagggaa tgaacgcgcc agtgtcgtgc
     5161 aggaagctgt cgcgcagccc gaggacctcg ccggttttct ttgccgcaag ctcgaggtag
     5221 tggatctgcg tgcgctcctg cgacgagccg atgaagttct cgcgccgatc ctcgatgtat
     5281 tttaccggac gaccgagctt cattgccgcc atcgggacga ggagctcgtc gggatggaac
     5341 atcatgatct tctgtccgaa cccgccaccg acgttcggcg caatgacgcg aaccttgtcc
     5401 tcgtcgagct tgaggatgga cgacaacccg ccgcgcagcg agatcggcgc ctgggtgccg
     5461 tcccagacgg tcaactcctc cgaaacctgg tcccagctcg ccgcgatcgc ccggcattcc
     5521 atcggcgccg ccgtcgagcg atcgatctgg acgcggatct tggtgatgtg ctcggccttg
     5581 gcgaaggcgt catcgggatt gccgctgacc tggacaaaat gcgccgcgag attgttggtc
     5641 gcgtccgcat ggaccagcgg agcgccgtca cgcaccgctt tctcgaggtc catctccacg
     5701 tcgagcggat cgtagtcgac ctcgatgagc gccgcagcgt cttcggcgac gtaacgatcg
     5761 acagcaacca ccatggcgac gcactgcccg acgtaataaa cgtccccgcg ggccagcgga
     5821 cgctgcgtgt gcggatgctt catcgaggga tgggggatga gcagcggcat gtcgagatcg
     5881 agatcgccga tattctcgca ggtatagacc accgctacgc cgggatgccg ctccgccgcg
     5941 gcggtattga tcgaacggat gcgtgcgcgc gcaaacggac tgcgcacgaa ggcggcgtgc
     6001 agcgcctgcg gcagcgggat gtcatcgacg aacgctcctt cgccgcgcag cagcttggga
     6061 tcgatgttgc gctcgacgcg tgctccgaac tggcgggttg acatcctaaa acctcggctc
     6121 aggcgcggcc ggcaagctgc gccgcgcggc gtaccgcggc gatgatgttg acgtatccgg
     6181 tgcagcggca aagattcccc gagagcatcg tgcggatgcc gtcgtcggta agatcaagcg
     6241 cttgcggctc attgaagcgc ccgaatatgt tcatgatcat tcccggcgtg caaaacccgc
     6301 actgcagagc atggcattcc ttgaaagcct gctggatggc atgaagccgg ccatcctctg
     6361 cggccagcgc ttctatggtc gtcacctcgg cgccctgcgc ctgcgcgacc agcgtgaggc
     6421 aggagcgccc agatttgccg tcgatgagca cggtgcagca cccgcagatg ccgtgctcgc
     6481 agccgacgtg agtcccggtc agccgcagct catggcggag gaaatcggac agcagcatgc
     6541 gcacgctgac gactcgttcg acgcgttcgc cgttgaccgt gagcgacact tcgagcgtcg
     6601 gatcgtccga cgtttgcgcc aaccgccgct gcaggttgcc gcgcgtcatc ggccgatcct
     6661 ctcccgcgca cgcgtcacgg cctttgccgc catacggcgc accaaagtcg cgaccgcgcg
     6721 gcgccggtag gcattgctcg cgtgcatgtc atcgggcgcg gtaacggctt cggccgccgc
     6781 cctgcccgcg gccttgaggt cggcttcgct cagcgccgtt ccggtgagca gcttctctgc
     6841 ttccggcaga cgaatgggcc gcgaggtcac gccgcatgcc gctaggcgaa cttctgaggt
     6901 gcggccgtca gcgttcatgc gcacgacggc gccgaccccg gcaatcgcgt aatcgccgtg
     6961 gcggcgcgtg acctcgtcga aggccgatcc gctgtcggcc ctgagaaccg gaaaccgtgc
     7021 ctcgaaggcg atctcgtcgc gccgtcgggt agtcgtcagg tggaaacgga agaattcgtc
     7081 ggccgcaatc tcgcggcggc ccgccgggcc ttcgaccagc acgctgccgc cgagcagtac
     7141 cagaaccagc ggcacttccg ccgcaccgtc ggcatggcac aggctgccca ccacggtgcc
     7201 gcggttgcga atggggatgt gggcgacgtg cgccatggcc tcgttaagga gcggattggc
     7261 tgcgcgcacc cgctcatcga gctcgagttc gcggtggcgg gtcatcgcct tgacgatgat
     7321 ctgcccgcct tcgatcgcga tccctttcag ctcggcgaca tgttggatgt cgacgagcag
     7381 cgacgggttc gcgaggcgga agttcatcgc gggaagaagg ctctggccgc ccgccagcac
     7441 catcgcgtcg ggatcactgg cgagggcgac taccgcttct ttcagggtcc gcggcgcctg
     7501 ataccggaac agcggcggct tcatgcttgc gtggtcccct acccgcgtga catgtatcca
     7561 cgggatgaat acgatatcga gataacggac gaactgtcaa tcagcggtct tgcctgcagc
     7621 cggcgcgtga tacaatggcg ctgtcactca tgcgctcttg acgaggcgct ggaggggaga
     7681 tgatgacgat gcaacgaggg ctgcccgaca ggtttccgcc gtccgcagcc gcgagagcag
     7741 cgcgcctcgg ccgcaagccc aagcaggccc cgttgaaggc aaacggcgtc gaggatctgc
     7801 gcggcatggc ccgcgcgctc gccatcatcg agcatctcgc ggttcgtccg gggcgtgtag
     7861 tcgacgtgac acacgacctc aggcttccct gggcgacggt ccatcggatc attgcgcagc
     7921 tcaccaaggc ggattttctt cggcgtgatc cggagaccaa gcgttatgag atcgggccgg
     7981 cgctgtggtt tgcgggcgcg acctacatgg caaatcatcg cgtgctgcgt gccgccctgc
     8041 cctatctgca taaggcggag cagatcagcg gcattgccgt tcagctcgcc gagcgcgtcg
     8101 gccgtcaggc cgtggccatc tactcggcgc agccatacgc gaccaatatc gccaaggcgc
     8161 agtatggcta tcactttccg ctgcattgcg gatcaaaagg cagggtgcta ctcgccttcg
     8221 ccggaccgga attcgtcaaa caatatttgc atcggccgct ggagaagctg accgacgcca
     8281 cattgaccga tccggacgaa ttgcgccgcg aactggagcg gatccggcaa tccggctatt
     8341 cgatcaccgt cgccgacgtt cagccgttca ccggctcgat ggcagcaccg atccgcgacg
     8401 cgagcggcac cgtcgtcgcc tcgctatgtt tcatcgcacg caagacgctg atccagaacg
     8461 tccagcgtcg cgacacgctc ttggagcact tgctgcacgc ggcgcatctg gcgtcgatgg
     8521 acctcggctg gcggcccgac ccggtatgag ggttcgggcg cccacatcac cggcgctcct
     8581 gataagaccc ctgaagattc ttgaatgttt cggcgagggc atcgacggcc gccgcgatga
     8641 acgccttgcc tgattccgcg gtggccttgg tcggatcacc gaaaatggcc gcatgaccgg
     8701 cgtcggggcg cgggcggcgc atataagtgc gggtcggatt ggtgggcgca acgaggtccc
     8761 agccgaccgg cccgtatttt gcggtcgcaa gctcggccat cttcacgagc tgcggacgcg
     8821 tcgccaactg aaacgacgtt tcgagttcgc aaccgtgccc cattccgccg acgaccgatt
     8881 tgcgcatggc gtgaatgcga tccgcggcgg gctcccaata gctcaccgcc gaaacaacga
     8941 agtcgaagct gcggtcgagt tcgtcgacca gatgccgcgc cacggcatcg ttggcggtac
     9001 cgttggggcg attgccattc aagatgatga ggtgatgaaa gccctgccgg atcaacgcgg
     9061 cgccgatctc gaacaccatg gtctgatagg tcggaatcga gagggagatc gtgccgggga
     9121 aaaattcgaa ggtcttcgag atcccgtagg cgaccggggg cgcgaccacg gcgtcgatcc
     9181 gcgccgacag ttctagcgcg atatgttcga cctgatgcgt gtcagtgtcg gtcggcatgt
     9241 gcgggccgtg cgcttcggtc gctccggtcg ggagtatcac cggctttcgt gcctcaatga
     9301 ccttggcgat ctccatctgc gtcatgctcg acatgcgacg ttccatctct ctcgctccgg
     9361 ttggtcgcgc ctcagcgcgg cgagttgcca caagcgtctg gccggcgcaa gttcatggcc
     9421 gatgagggac cgcgcatgag aatcacgcga tcgttcacgg tagcgcgccc ggcggcagcc
     9481 gtctgggcgt tctttcagga cgtgcctgcc gtagcctcct gcctgccagg ggccgaactc
     9541 gtcgaatcga gagacgaccg cgtgcagcgt ggcagagttg gaataagtct cggtcccttc
     9601 aaggcttcct ttgaaggcga ggcaacgatc aagaccgatc ccgcaacccg ctccggccat
     9661 gtcgaaggcc gcggcgtcga caagcgcggc ggcagccatt cgcggatgac gctcgactac
     9721 cggctgaacg acgacgcagg cgcgacgcgc gtcgatatcg atgtcgatct cactctcgcc
     9781 gggccgatcg cgcagttcgg ccgcagcggc ctcgtcaccg agaccgccaa cgtgctgatc
     9841 gccgattttg cccgcaacct cgaagaccgg atttcgactt ccgcccggac tgcgggcaat
     9901 gtggcgcagc cagcgaggcg aataaacgtg ctcgccgttc tgctggaagc agtccggacc
     9961 aggatcagga ttctcttcgg tcgccagact tgatggcccg acggaccttc tgcgctcagg
    10021 cggccgtgag cgttcgccgg aatgtaagct cctggcgcct tccgcgccgg gtttgcagct
    10081 cgcagatcag ccgggcccgc agcgccaaag gtggcgcggc ctcggcgtcg ggcggccgca
    10141 catagaaatg gcggatcaac tcatccgcct ggttggcgta gtcgttggaa ttgtacggga
    10201 atatcgtcgt ttcgatcgag gcggaatcgg tcaagtccag ctccggtgcc acgaacttga
    10261 cgctcgcggt ctcgggccgc catgcctgcc accggtcaca gattttcgtt cccggcggat
    10321 cgatgatctc gacgctacgc accagcagag gatgccgctg caagttgcgc atgacgattt
    10381 cgagcgtgaa ccagtgcgtc ttcgcatcgc ggtcgagcgt ggcctcggcc agcgatttct
    10441 ccagctgccg acctcgccgc agcgaccgca gcgcccaaag ggcaattccg ccgatgagca
    10501 ctgcgccaga ggcggcagcg atttcgcgac tatgcggaag agcccacgca acgggaccgc
    10561 ccgcatagcg ttgcagccat tccgccggtg cgttcagggc ggggcctgcc caatcggcca
    10621 gcgcgtgaac gcgaagcgca agccaatcgc tgatgtcggt tgccgagatc gtcacgaaac
    10681 gagaacaccg gttggcgcgc cacgctcgag gtcgagattc ccaagcgatc gccgcaacga
    10741 aggtgcatta tgcgcgcaat gctgccgacg cacaatcgtc gtcactagcc tacgcagcgc
    10801 cttgcatgtg aactttgggc agcgaaaccc caggcgtctt gcggatggtc atggtccggc
    10861 ttttcggcgt ctcatcatga agccaacgac cgtaaagacg acgcatccaa tcagcccgac
    10921 gagccaa
//
LOCUS       DATMQB010000064         5007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_946755, whole genome shotgun sequence.
ACCESSION   DATMQB010000064 DATMQB010000000
VERSION     DATMQB010000064.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5007
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_946755"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..727)
                     /locus_tag="VNY79_02215"
     CDS             complement(<1..727)
                     /locus_tag="VNY79_02215"
                     /inference="COORDINATES: protein motif:HMM:NF024816.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HWX71295.1"
                     /translation="MASTFAALALAGCASLGNPPASPRDDALYANSQSNLVSLTEVVE
                     KHPDDPQAYNMRGSVLGGAGRQEQALADFNKAISLDPNYAQAYANRALIYRDAGRLDL
                     ALADYNRALALDGSYASAYLGRGIVHRQQGHGTQALEDFNKAIALKPDNAQAYCNRGL
                     LYQGQRQQQFAIDDFSTAIGLATQKPEPYVARALSYLAVGDAKSATSDLDDAVQIEPR
                     NLQAWTSRGLAYERLGQREKAAGS"
     gene            complement(933..1211)
                     /gene="rpsU"
                     /locus_tag="VNY79_02220"
     CDS             complement(933..1211)
                     /gene="rpsU"
                     /locus_tag="VNY79_02220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006339042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HWX71296.1"
                     /translation="MQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSERKA
                     REKAEAIRRARKLARKRLQREGLLPMKPKPVGAAAGGRSGPPRAPRFG"
     gene            complement(1389..2504)
                     /locus_tag="VNY79_02225"
     CDS             complement(1389..2504)
                     /locus_tag="VNY79_02225"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HWX71297.1"
                     /translation="MSVLAPVLAPGATIGILGGGQLGRMLALAAARIGFKCHVFAPTP
                     DSPAFDVVHRVTHADYADTQALDRFAADVDVVTYEFENVPAETATFLAARVPVLPDPK
                     VLATTQDRLAEKNFVAGLGIRTAPYAAAGAPSELATALDRIGRPAVLKTRRFGYDGKG
                     QATIDNGTDLAAAWSEVGGQPCIVEAFVPFAREVSVVAARGRDGSVECFDVSENEHRA
                     HILKISRVPADLPETTAHAARRIAEAIADSFAYVGVLTVEMFVLRDGGLLVNEIAPRV
                     HNSGHWTIDGASVSQFEQHLRAVAGWPLARPVRRGRVEMINLIGNEVDDFRSWLAVPG
                     ACVHLYGKTAVRPGRKMGHVTRVFADENAPGAGGGSG"
     gene            complement(2501..2968)
                     /gene="purE"
                     /locus_tag="VNY79_02230"
     CDS             complement(2501..2968)
                     /gene="purE"
                     /locus_tag="VNY79_02230"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009320 - phosphoribosylaminoimidazole
                     carboxylase complex [Evidence IEA];
                     GO_function: GO:0004638 - phosphoribosylaminoimidazole
                     carboxylase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HWX71298.1"
                     /translation="MGSQSDWQTMRHAAETLDTLGVSYEARIVSAHRTPERLYAFAKG
                     AKAAGFKVVIAGAGGAAHLPGMTAALTSLPVFGVPIESKALSGLDSLYSIVQMPPGVP
                     VGTLAIGQAGAVNAALLAASVLALSDPALADRLDAWRQRQTAGVGEAPKDGGA"
     gene            3180..3901
                     /locus_tag="VNY79_02235"
                     /pseudo
     CDS             3180..3901
                     /locus_tag="VNY79_02235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003608466.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1614 domain-containing protein"
     gene            complement(3996..4457)
                     /locus_tag="VNY79_02240"
     CDS             complement(3996..4457)
                     /locus_tag="VNY79_02240"
                     /inference="COORDINATES: protein motif:HMM:NF042842.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6790 family protein"
                     /protein_id="HWX71299.1"
                     /translation="MYLASIVLLLFVLPAGCVIGQMLWFGGAADVMLLVGKWFVFWAV
                     GVRLFIAGVRQVAQPQFTAESIFEIKDRAALGIVRELGFANLSTGTLGLASLAVPAWV
                     APAAIVGGLFCGLAAAGHALRGKRNFKEQTALISDIFAFVILAVFVVSRGF"
     gene            4612..5004
                     /locus_tag="VNY79_02245"
     CDS             4612..5004
                     /locus_tag="VNY79_02245"
                     /inference="COORDINATES: protein motif:HMM:NF020457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DOPA 4,5-dioxygenase family protein"
                     /protein_id="HWX71300.1"
                     /translation="MPAIPRAKADRRDHRSIAEYHAHVYYDPATTRGRAERLRQRVAA
                     EFPRAKLGRWHDELVGPHTQAMYQIAFPSGMLSSFVPWLMLNRDGLTILLHPETGDDY
                     RDHTAHAAWFGAVLPVRVEVFQQHRAPE"
BASE COUNT          833 a         1727 c         1605 g          842 t
ORIGIN      
        1 aggagcctgc cgccttctcc cgttgcccaa ggcgctcgta ggccagtccg cggctcgtcc
       61 atgcctgcag gttccgcggc tcgatctgga ccgcgtcgtc gaggtcgctc gtggccgatt
      121 tggcgtcgcc gacggcgagg tagctcagtg cccgcgccac gtagggctcg ggcttctgcg
      181 tcgccagccc gatggcggtc gagaaatcgt cgatcgcgaa ttgttgctgg cgctgcccct
      241 gatagagcag gccgcgattg cagtacgcct gggcgttgtc gggcttcagc gcgatcgcct
      301 tgttgaagtc ctcgagcgcc tgcgtgccgt gcccttgttg gcggtgcaca atgccgcggc
      361 cgagataggc cgacgcgtag gagccatcga gcgcaagcgc ccggttatag tcggcgagcg
      421 cgagatcgag tcgacccgcg tcccgataga tgagggcgcg attggcgtag gcctgagcat
      481 agttgggatc gaggcttatc gccttgttga aatcggccag cgcctgttcc tgccgccccg
      541 ccccgcccag caccgagccg cgcatgttat aggcctgcgg gtcgtcgggg tgcttttcga
      601 cgacctcggt cagtgaaacc aggttggatt gcgagtttgc gtagagcgca tcgtcccttg
      661 gcgaagccgg cggattgccg agcgacgcac agccggccag cgccagtgcc gcgaacgtcg
      721 aagccaccaa ccacacgcgc gccggtgctg tccgcttctt ccggcagcgg cccgtgcttc
      781 gcgcggcaac tgcgtccgtt atccggtctc gtggcacggc ggcaccctcg gcgcctacgg
      841 taaatcacgg agaagctgga cgatagaccc ggccggctaa aacaagacgc gggcaaggca
      901 cggccggcgc cgtcggcaac gttcgtagtg gatcaaccga agcgcggcgc gcgcggcggc
      961 ccggacctgc cgccggcggc ggcaccgacg ggtttcggct tcatcggcaa caagccctcg
     1021 cgctgcaggc gcttgcgcgc gagcttgcgg gcgcgccgga tcgcctcggc cttctctctt
     1081 gcttttcttt ccgatggttt ttcgtaatga ccgcggagct tcatctcgcg gaaaatgccc
     1141 tctcgctgca tcttcttctt cagcgcctta agggcttgat cgacattgtt gtcgcgaacg
     1201 agaacctgca cgcatcctcc tttgtctgtg cacctgtcga tgaaaaggcg gcgcaagcgc
     1261 tgtgcgcctg cgccaacttg acgcgttttc tagcagaatg acgccggcaa gtccacaagc
     1321 cggccgtttg ctgaggttac cgaggcattt ccgctcggag ctggcgtgcc ggcgtcccgc
     1381 gcggccgatc agccgctccc cccgccggca cccggcgcat tctcatccgc aaacacccgc
     1441 gtgacgtggc ccatcttgcg gcccgggcgc accgccgtct tgccatagag gtggacgcaa
     1501 gcgccgggaa cggcgagcca ggatcgaaag tcgtcgacct cgttgccgat gaggttgatc
     1561 atttccacgc gaccgcggcg caccggcctc gccagcggcc agcctgccac cgcccggagg
     1621 tgctgttcga actgcgagac cgaggcaccg tcgatggtcc aatggccgga attatgcacc
     1681 cggggcgcga tctcgttgac gagcagaccg ccgtcgcgca gcacgaacat ctcgaccgtg
     1741 agcaccccga cataggcgaa gctgtccgcg atggcctcgg ctatgcgccg cgctgcgtgc
     1801 gcggtcgtct ccggcaggtc ggccggcacg cgcgagatct tgaggatgtg cgcgcggtgc
     1861 tcgttttcgc tgacgtcgaa gcattcgacg ctgccgtccc tgccgcgtgc ggcgacgacg
     1921 gagacctcgc gcgcgaacgg cacgaacgct tcgacgatgc aaggctgtcc gccgacctcg
     1981 ctccacgccg ccgcgagatc ggtgccgttg tcgatggttg cctggccttt gccgtcgtag
     2041 ccgaaccgcc gcgtcttgag caccgcaggc cggccgatcc ggtcgagcgc ggttgcgagt
     2101 tctgacggcg cgccggccgc ggcatagggc gcggtacgga tgccgaggcc ggcaacgaaa
     2161 ttcttttccg ccagccggtc ctgcgtcgtc gccagaactt tcgggtcggg caggaccgga
     2221 acacgcgcgg caagaaaggt cgcggtctcg gccggaacgt tctcgaactc ataggtcacg
     2281 acatcaacgt cggccgcaaa gcggtcgagc gcctgcgtgt cggcgtagtc cgcgtgggtc
     2341 acgcggtgga cgacgtcaaa ggcaggcgag tcgggagtcg gtgcgaacac gtggcacttg
     2401 aagccgatgc gcgccgccgc cagtgccagc atgcggccga gctgtccgcc gcccagaatg
     2461 ccgatcgtgg ctcccggtgc gagaacgggc gcgaggacgc tcacgcgccc ccatccttcg
     2521 gcgcctcgcc gacgccggcc gtctgacgct gccgccaggc atcgagccgg tccgctagcg
     2581 ccggatcgct caacgccaag acgctggcgg caagcagcgc cgcattgacc gcacccgcct
     2641 gcccgattgc cagcgtcccg accggaacgc ccggcggcat ctgcacgatc gaatagagcg
     2701 agtcgagacc cgacagcgct ttcgactcga tcggtacccc gaacaccggc aggctggtca
     2761 aagcggcggt catgcccggc aggtgcgcgg ccccgcccgc gccggcgatg accaccttga
     2821 agcccgcagc cttcgcgcct ttggcgaaag cgtagagccg ctcgggggtg cgatgggcgg
     2881 aaacgatgcg cgcctcgtag cttacaccca gcgtgtcaag cgtctcggcg gcatgccgca
     2941 tggtctgcca gtcagactgg ctgcccatga tgacggctac ggattttgct cccggcggcg
     3001 ccaaatggaa tcccctgcgc gaaggaagcg ccggattata ggctcgcgca tcagagtcgc
     3061 aaggcggcaa gccgtcgccg cctccaagca aagcggaatc tgcagacttg cggcaacgcc
     3121 ggacgccgat tttcgcaacc tttcgatacg ggttaggtta accgtccgga gcactaccga
     3181 tgcagatgag ccaactccac tacctgccgc tgacgcccgg cttcttttcc attcttgtcg
     3241 gcgttttctt cattctcttc atccttctca tcgtcggcgc gctgcgccgc gcctatctga
     3301 acctgggcgt cagttcgaat accgccatgc tgctgctgct ggcatccctg atcggcagct
     3361 atttcaacat cccgatcgcc gagctgccgc atgagccggt cgtgtccaac caggccatcg
     3421 aattcttcgg catgcagtac accgtgccgg tcgtggagca ctggcgggca ccgtcatcgc
     3481 cctcaatgtg ggcggcgccg tcatcccgac gctgatgtcg ctttatctgc tcatcacccg
     3541 gcagatgtgg gtcaagggac tgatcgccac cgcgatcgtc gccgtcgtgc tgcactggct
     3601 cgcggacccg gtgccggggg tcggcattgc ggtaccggtg ttctggccgg ccttgatcac
     3661 cgccgtggtc gcatggattc tggcgcggga gaacgccgcg ccgctcgcct atgtgggcgg
     3721 cagcctcggc accctcatcg gcgccgacct caccaacctc gacaaagtgc gcggcctcgg
     3781 cgcgccggtc gcttcgctcg gcggcgccgg gactttcgac ggcatctttc tcaccggcat
     3841 cctcgccgtc ctgttggcgg gcctctacca ccctcgccgc cagaccgtgc aggcgcagtg
     3901 agtttcgacc gcggccttgc ccgcatccgc gcctggacct ggacggcgct gcgcaaccgc
     3961 cggccttacg cgcgggccgg accgggacgc cggcttcaaa agccccggct cacgacaaaa
     4021 acagcgagga tgacgaaggc gaaaatgtcg gagatcaatg ccgtctgctc cttgaaattc
     4081 ctcttgccgc gaagcgcgtg gcccgcggcg gcaaggccgc agaagaggcc gccgacaatg
     4141 gcggcaggcg cgacccaggc cggcaccgcc aggctcgcca agcccagcgt gcccgtcgaa
     4201 aggttggcaa agcccaactc gcgcacgatg ccgagtgccg cgcgatcctt gatctcgaaa
     4261 atgctctcag ccgtgaattg cggctgcgcc acctgccgca cgccggcaat gaacagccgg
     4321 acgccgaccg cccagaacac gaaccatttg ccgacgagaa gcatgacatc ggccgcgccg
     4381 ccgaaccaca gcatctgccc gatcacgcag cccgccggca ggacgaagag cagcagaacg
     4441 atcgatgcca gatacatact agccccaggc gcgatcccgg atcggcggag agcatgaggc
     4501 gcgcggcaac ggcttgcaag ctcaagccgg cgcccagcga cacgtgctat cgtctggtga
     4561 tggtcaacgc gttccaagca aaccccgtgc cggatgttga ggtcgaagag aatgcccgca
     4621 attccacgcg cgaaggctga ccgcagagat caccgatcga tcgccgagta ccacgcccac
     4681 gtctactacg atccggcgac gacccgtggc cgggccgagc gcctgcggca gcgcgtcgcc
     4741 gcggaatttc cgcgggctaa actcgggcgc tggcacgacg aactcgtcgg accgcacacg
     4801 caagcgatgt atcagatcgc ttttcctagc ggcatgctgt catccttcgt gccgtggctc
     4861 atgctcaacc gcgacggact gaccatcctc ctccatccgg aaaccggtga cgactatcgc
     4921 gaccatacgg cgcacgccgc ctggttcggc gccgtgctgc cggtgcgggt tgaggttttc
     4981 caacaacacc gcgcgcccga gtgagcc
//
LOCUS       DATMQB010000065         2246 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4357309, whole genome shotgun sequence.
ACCESSION   DATMQB010000065 DATMQB010000000
VERSION     DATMQB010000065.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2246)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2246)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2246
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4357309"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..541
                     /locus_tag="VNY79_02250"
     CDS             <1..541
                     /locus_tag="VNY79_02250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020809838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cobyric acid synthase CobQ"
                     /protein_id="HWX71301.1"
                     /translation="DLAVVRSAGFDIDIAAHRRRGGLVLGLCGGYQMLGRTIADPAGI
                     EGPPATVEGLGLIDVATTLSDSKRLEPVRGSTSDGAAFAGYEMHMGVTAGPDCARPFA
                     RLADGTADGATSPDGRVMGTYVHGLFADDRQRAAWLARLAAGPTKIAYGDLIERTLDA
                     LAAHLAAHLDLDRLLTLAR"
     gene            complement(525..1496)
                     /gene="cbiB"
                     /locus_tag="VNY79_02255"
     CDS             complement(525..1496)
                     /gene="cbiB"
                     /locus_tag="VNY79_02255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008876487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016880 - acid-ammonia (or amide) ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-phosphate synthase CbiB"
                     /protein_id="HWX71302.1"
                     /translation="MSVALALLAMLIELCLGYPQFVQRAIGHPVTWTGRLIAALDRAL
                     NRETAAANARRAAGVAAVAILVAVVGAVAFLVQRELLRWPGGVLAAALLASTLIAQRS
                     LHRHVADVAVTLAQGDIGAARVAVSQIVGRDTAALDAAGVSRAAIESLAENFSDGIVA
                     PVLWLAIAGLPGAALYKAINTADSMIGHRTPRHAAFGWAAARLDDLVNLPASRLSALL
                     LVAAAALVKDASARAAGRAVWRDAARHRSPNAGYPEAAMAGALGLALAGPRVYGGVPV
                     DDAVMGDGRRDAGAADIVRALALYRWADALLIALLAVLWAALLIAPA"
     gene            1495..>2246
                     /locus_tag="VNY79_02260"
     CDS             1495..>2246
                     /locus_tag="VNY79_02260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010910063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HWX71303.1"
                     /translation="MIPYDRVDEAVPHGGDLDAARRQFPDAIEPFIDLSTGINPNPYP
                     LPRFPAGLFARLPSLEAAEALAATAAQAYGAPSAAHVVLAPGTQLLLPLVAALVPPGR
                     AAVLVPSYGEFARAAVLAGHRVKAVRELDACADADLVMVANPNNPDGRLLHRDALLAL
                     AEKNLRQRDGMLIVDEAFMDVGPPGTSLAGEVSHGNVVVLRSFGKFFGLAGLRLGFAL
                     ASPAVAARLRAALGPWAVSGPALAVGAKALADT"
BASE COUNT          333 a          794 c          805 g          314 t
ORIGIN      
        1 ggatcttgcg gttgtgcgca gcgccggctt cgacatcgac atcgccgcgc atcggcgccg
       61 cggcggtttg gtcctcggcc tctgcggcgg ctatcagatg ctggggcgca ccatcgccga
      121 ccccgccggc atcgaaggtc cacccgcaac ggtcgaaggg ctcgggctca tcgatgtcgc
      181 gaccacgctg tcggacagca aacgcctcga accggtgcgc ggatcgacga gcgacggcgc
      241 cgcttttgcc ggctacgaga tgcacatggg cgtgaccgca ggacccgatt gcgcgcgtcc
      301 gttcgcgcgg ctcgccgacg gtacggcgga cggcgcaacc tcgcccgacg gccgggtcat
      361 gggcacctac gtgcacgggc tgttcgccga cgaccggcaa cgcgcggcat ggctcgcgcg
      421 tttggcggcc ggcccgacga agatcgccta cggcgatctg atcgagcgca cgctcgatgc
      481 gctcgcggcg catctcgccg cgcacctcga tctcgaccgc ctgctcacgc tggcgcgatg
      541 agaagagccg cccaaagaac ggcgagcagc gcgatcagca gcgcatcggc ccagcggtag
      601 agcgccagcg cgcggacgat gtcggcggcg ccggcgtctc gccgtccatc gcccatgacg
      661 gcgtcatcga ccggcacgcc gccatagacg cgcgggccgg cgagcgccaa gccgagcgct
      721 ccggccatgg ccgcctcggg atagccggca ttgggcgagc ggtgacgcgc cgcatcgcgc
      781 cacacggcgc gccccgccgc ccgcgccgac gcatctttga cgagcgcggc cgccgcgacc
      841 aggaggaggg ccgaaagacg cgaggccggg aggttgacga gatcgtcgag ccgcgcggcc
      901 gcccagccga aggccgcatg gcgtggcgtg cggtggccga tcatgctgtc ggcggtgttg
      961 atcgccttgt agagtgcggc gccagggagg ccggcgatgg cgagccacag gaccggcgcg
     1021 acgatgccgt cggagaaatt ttccgccagg ctctcgatgg cggcgcggga gacgcccgct
     1081 gcatcgagcg cggccgtgtc gcgtccgacg atttgcgata ccgcgacgcg cgcggcgccg
     1141 atgtctccct gggcgagcgt gacggcgacg tcggccacgt gccgatgcaa gctgcgctgc
     1201 gcgatcaatg tgctggcaag taaggccgcg gccaggacgc cgccaggcca gcggagcagt
     1261 tcgcgctgca cgaggaaagc aacagcgccg acgacggcga cgaggatcgc aaccgcggcg
     1321 acgcctgcgg ctcgccgcgc gtttgctgca gcggtctcgc gattgagcgc gcggtcgagg
     1381 gcagcgatga ggcggccggt ccaggtgacc ggatggccga tcgcgcgctg cacgaattgc
     1441 ggataaccga gacagagctc gatcagcatg gcgagaagtg ccagcgcgac ggacatgatc
     1501 ccctacgacc gcgtcgatga agcggtgccg cacggcggcg acctcgacgc cgcaaggcgc
     1561 cagtttccgg acgccatcga accattcatc gacctctcca ccgggatcaa tcccaatccc
     1621 tatccgctgc cgcgctttcc ggccggcctc ttcgcccgac tgccgtcgct cgaagccgcc
     1681 gaggcgcttg cggcgaccgc cgcgcaggct tatggcgcgc cctcggcggc gcacgtcgtg
     1741 ctggcgccgg gcacgcagct gttgctgccg ctggtcgctg cgctcgttcc accgggccgc
     1801 gcggcggtgc tcgtgccgag ctacggcgaa tttgcgcgcg ctgcggtgct cgccgggcac
     1861 cgcgtgaaag ccgtgcgcga actcgacgcc tgcgccgacg ccgatctcgt catggttgcc
     1921 aatccaaaca atccggacgg caggcttctc cacagagatg ccttgctcgc gttggccgaa
     1981 aaaaatctgc ggcagcgcga cggcatgctg atcgtcgacg aggccttcat ggatgtcggc
     2041 ccgccgggga cgagcctcgc cggtgaggtg tcgcacggca acgtcgtcgt gttgcgctcg
     2101 ttcggaaaat tcttcgggct cgccggcctc cggctcggtt tcgcgctcgc ttcgccggcg
     2161 gtggcggcgc ggctgcgcgc cgcgctcggc ccgtgggcgg tatccggacc ggccctcgcc
     2221 gtcggcgcca aggcgctcgc ggacac
//
LOCUS       DATMQB010000066         5836 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2190220, whole genome shotgun sequence.
ACCESSION   DATMQB010000066 DATMQB010000000
VERSION     DATMQB010000066.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5836)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5836)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5836
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2190220"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1450)
                     /locus_tag="VNY79_02265"
     CDS             complement(<1..1450)
                     /locus_tag="VNY79_02265"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012398.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HWX71304.1"
                     /translation="MYDNLLANVPTDLWIGGKWRKSSDGGRFDVIDPATENKVASVAS
                     ATVEDAKAALDAASAAFPGWAAKKPRERAEVLRKSFELIMRDAERLAKLITIENGKAL
                     SDSRGEVAYAAEFFRWFAEEAVRNVGQNSVAPGSGARILVHHKPAGVAVLVTPWNFPA
                     AMATRKIGPALAAGCAVVLKPASDTPLTMLALMPILEEAGVPAGVVNVVPSRSSGKVV
                     STMLHDPRVRVLSFTGSTEVGRKLLHEAADNVVRPAMELGGNAPFIVFEDADIDAAIE
                     GAMIAKMRNMGEACTAANRFYVHEKVHDEFAKKLTAKMSGLKMGNGLDDGVSLGPLVN
                     KDGLAKVVELVDDAVKKGAKILTGGKAPDGPGFFYPATVLANVSNDAKMLNEEIFGPV
                     ASIQTFKSEDEVVTRANDTEYGLVAYLYTKDVGRGMRVSEKLEFGMIGLNRGLVSDPA
                     APFGGMKQSGIGREGAHEGLMEFLETQYVSVNW"
     gene            complement(1480..2577)
                     /locus_tag="VNY79_02270"
     CDS             complement(1480..2577)
                     /locus_tag="VNY79_02270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018409557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enolase C-terminal domain-like protein"
                     /protein_id="HWX71305.1"
                     /translation="MSERLTYKSVEVRAVAVPLKRPVIAKVGSFKEWPLILIDLWTHE
                     GIVGRSYLGPYLKNAARYVIPAIRDLAAALIGKPVSPLENFQLNRRSLNLIGYEGAAL
                     IAVSGLDMAAWDALAKAAGMPLAVLLGGSLGPVPAYNSNGLWLKSVDALAKEAGELVA
                     EGGFKALKLRLGRERLADDLTAIREVRKAAGDDVKLMVDFNQGLTLGDALARCHALDD
                     EGLYWFEEPIVYDNLAGYAQLARELKTPVQLGENFYGPRVLYEAIRAEAGDYVMPDLT
                     RIGGVSGWLRAAAVAGAAGIQVSSHLYPEVSAHLLRVTETAHWLEWQDWVDPVLQQPY
                     PVKDGCLEIPNRPGAGIEWDEGAVTRYRYDA"
     gene            complement(2589..3569)
                     /locus_tag="VNY79_02275"
     CDS             complement(2589..3569)
                     /locus_tag="VNY79_02275"
                     /EC_number="1.2.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HWX71306.1"
                     /translation="MAELTYRDAVIRGIAQEMTRDPDVVFLGEDIGKAGGVFKATVGL
                     FEQFGPVRVRDTPISEQAILGAAMGAAMTGLKPIAEIMFSDFIAVCFDYIANEFPKSR
                     YMSNGQVKCPLVVRTGNGGGARFGAQHSQSVENWCMMIPGLKVVAPSSPRDVIGLMAA
                     AVRDPDPVIFFEHKSLYATKGEVPDGEIVDTLGSAKIVRPGNDATILALALMVPRALA
                     AAEKLKAEHGIDCEVVDVRSLVPLDTQTILGSVARTHRLFTVEENPRLCGWGAELVSI
                     VADEAFYDLDGPPVRITTPHIPLPASDFLEDLALPTVERIAERVQRSMQS"
     gene            complement(3557..4588)
                     /locus_tag="VNY79_02280"
     CDS             complement(3557..4588)
                     /locus_tag="VNY79_02280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HWX71307.1"
                     /translation="MAKIEDRAPPSPASLNDDIGEAKRLTMYRMQVEIRETEQRAHDL
                     FLQNLVKGTSHLSLGQEAVATGFAAAMRQGDLSFCTYRGHAHTLARGVPIAKVLGELM
                     LRDIGLMRGKGGSMHLTSIDHGVMGSYAIIGSHLPIACGAAWRAQYKGDKDVSVCFFG
                     DGTTNIGAFHEALNFAVVWKLPVVFVCENNLYMEYTPIADVTAVPHPAADRAAAYGLP
                     SIVIDGNDADDVYRTAGSAYDKARAGGGPSLIECMTYRHSGHSRADPAKYRPEGELER
                     WKERDPLKIYRERLKQFGIGEEEIVRIETDVKRRVDEATEECKAAPLPPADILTKDVY
                     ADGGFAWRN"
     gene            4774..5049
                     /locus_tag="VNY79_02285"
     CDS             4774..5049
                     /locus_tag="VNY79_02285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6460 domain-containing protein"
                     /protein_id="HWX71308.1"
                     /translation="MPQDYVQRFFGGPPLAVIGRLILMSILVGVILAAIGLDPWNIVD
                     SVRRLIWHLWNMGFDAVRWLWQYFLLGAVIVLPIWLLVRLARAPRGG"
     gene            complement(5122..>5836)
                     /locus_tag="VNY79_02290"
     CDS             complement(5122..>5836)
                     /locus_tag="VNY79_02290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4167 domain-containing protein"
                     /protein_id="HWX71309.1"
                     /translation="GQNKRMRGRNRKGGHHQNPLSRMYESNGPDVKIRGTASHVAEKY
                     LQLARDAQSSGDPIAAENYYQHAEHYFRLIAAAQEQFRQSQPYFQQQGEPRGNLPDDG
                     YDDGDNEQPSIGGEPFAPREQQLFYPREQQHPQMQPQHPQPRAQHLPQQREEDVERLP
                     SFITGGQAHQQPPQQGQGGNGPNGPNGPNGPNGPNGFDGSADRFPLHRRRRRHRGPRD
                     QAVSGENDAPHPSGGASDD"
BASE COUNT          921 a         1899 c         1940 g         1076 t
ORIGIN      
        1 accagttcac cgacacgtat tgcgtttcca agaactccat caacccctcg tgcgccccct
       61 cgcggccgat gcccgattgc ttcatgccgc cgaacggcgc cgccggatcg gagacgaggc
      121 cgcggttcaa tccgatcatg ccgaactcga gtttttcgga cacgcgcatg ccgcggccga
      181 catccttggt gtagagatag gcgacgagac cgtattcggt gtcgttggcg cgcgtgacca
      241 cctcgtcctc ggacttgaag gtctggatcg acgcgaccgg tccaaagatt tcctcgttga
      301 gcatcttggc gtcattggaa acgttggcga ggacggtggc cggatagaag aagccgggtc
      361 cgtccggcgc cttgccgccg gtgaggattt tcgcgccttt cttcaccgcg tcgtcgacca
      421 gttcgaccac tttggccaga ccgtccttgt ttaccagcgg tcccaggctg acgccgtcgt
      481 cgagcccgtt gcccatcttc agcccggaca tcttggcggt gagttttttc gcgaactcgt
      541 cgtgcacctt ctcgtgcaca tagaagcggt tggcggcggt gcacgcctcg cccatgttgc
      601 gcattttggc gatcatggcg ccttcgattg cggcgtcgat gtcggcgtct tcgaacacaa
      661 tgaacggcgc gttgccgccg agctccatcg ccggacgcac cacgttgtcg gcggcctcat
      721 gcaggagctt gcggccaacc tcggtcgagc cggtgaagga aagaacgcgc acgcgcgggt
      781 cgtgcagcat cgtgctcacg accttgccgg acgaccgcga cgggaccacg ttgaccacgc
      841 cggccggtac gcccgcctcc tcgaggatcg gcatcagcgc gagcatggtc agcggcgtgt
      901 cggacgcggg cttgagcacg accgcgcaac cggcggcgag cgccgggccg atcttgcgcg
      961 tcgccatcgc tgccgggaaa ttccaagggg tgaccagaac cgcaacgccc gccggcttgt
     1021 ggtgcactag gatgcgcgcg ccggagccgg gcgcgaccga gttctggccg acattgcgca
     1081 ccgcctcctc ggcgaaccag cggaaaaact ccgccgcgta ggcgacttcg ccccgcgaat
     1141 cggagagcgc cttgccgttc tcgatggtga tgagcttcgc cagccgctcg gcgtcgcgca
     1201 tgatcagctc gaaggatttg cgcaaaacct cggcgcgctc gcgcggtttc ttggcagccc
     1261 agccgggaaa ggcggcgctc gccgcatcga gcgcggcctt ggcgtcctcg acggtcgcgc
     1321 tcgcgaccga cgcgaccttg ttctcggtgg cgggatcgat cacgtcgaag cggccgccgt
     1381 cggaggattt gcgccacttg ccgccgatcc acaggtcagt cgggacgttg gcgagaagat
     1441 tgtcgtacat gatgctcatc cttcgtagca ctgcgctgtt caagcgtcgt agcggtaacg
     1501 agtcaccgcg ccctcgtccc attcgatacc ggcgccgggc cggtttggaa tctcaaggca
     1561 gccgtccttg acagggtacg gctgctgcag aaccggatcg acccaatcct gccactccag
     1621 ccaatgtgcc gtttcggtga cgcgcagcaa atgcgccgac acctcgggat atagatggga
     1681 ggagacctga atgccagcag cgcccgccac cgccgccgcg cgcaaccagc cgctcacgcc
     1741 gccaatacgc gtgagatcgg gcatgacgta gtcgccggct tcggcgcgga tcgcttcgta
     1801 aaggacgcgc ggcccataaa aattttcgcc gagctgcacc ggcgtcttga gttcgcgggc
     1861 gagctgcgcg tagccggcga ggttgtcgta aacgatcggc tcctcgaacc agtagagtcc
     1921 ctcgtcgtcg agcgcgtggc agcgcgccag cgcatcgccg agagtgagtc cctggttgaa
     1981 atcgaccatg agcttgacgt catcgccggc ggccttgcga acctcgcgga tcgccgtgag
     2041 gtcgtcggcg aggcgctcgc ggccgagccg aagcttcaag gccttgaagc cgccctccgc
     2101 gacaagctcg cctgcttcct tcgccagagc gtcgacgctt ttgagccaga gaccgttgct
     2161 gttgtaagcg gggaccgggc ctaatgagcc gccgagcagg acggcgagcg gcatcccggc
     2221 agccttggcg agcgcatccc atgccgccat gtccaggccc gacaccgcga tcaatgcggc
     2281 cccttcatag ccgatgagat tcaacgatcg ccgattgagc tgaaaattct cgagcggtga
     2341 aaccggcttg ccgatcagcg ctgcggcgag gtcgcgaatc gcgggaatga cgtagcgggc
     2401 ggcgttcttg agatacggcc cgagatagct gcggccgacg atgccttcat gcgtccaaag
     2461 atcgatcagg atgagcggcc actccttgaa cgatccgacc ttggcgatga ccggccgctt
     2521 cagcgggacc gcgacggccc gcacctcaac cgacttgtaa gtcagccgct cgctcatcgc
     2581 gcggagtttc aggattgcat cgagcgctgc acccgctccg cgatccgctc gacggtcggc
     2641 agcgccagat cctcgagaaa gtcggacgcc ggcagcggga tgtgcggcgt ggtgatccgc
     2701 actggcggcc cgtcgagatc gtagaacgcc tcatcggcga cgatggatac gagttcggcg
     2761 ccccagccgc acagccgcgg attctcctcg accgtgaaca gccgatgcgt gcgcgcgacc
     2821 gagccgagga tggtctgcgt gtcgagcggc accagcgaac gcacgtcgac gacctcgcag
     2881 tcgatgccgt gctcggcctt gagcttttcc gccgccgcga gcgcgcgcgg caccatcagg
     2941 gcgagtgcga gtatggtggc atcgttgccc ggccgcacga tcttggcgct gccaagcgta
     3001 tcgacgatct cgccgtccgg cacttcgccc ttggtcgcgt agagcgattt gtgctcgaag
     3061 aagatcaccg gatcgggatc gcgcaccgcc gccgccatca gcccgatcac gtcgcgcggg
     3121 ctcgacggcg ccacgacctt gaggccggga atcatcatgc accagttctc gacgctctgc
     3181 gaatgctgcg cgccgaagcg cgcgccgccg ccattgccgg tgcgcacgac cagcgggcac
     3241 ttgacctggc cgttcgacat gtaacggctc ttggggaatt cgttggcgat gtagtcgaag
     3301 cacaccgcga tgaaatcgga aaacatgatc tcggcgatcg gcttgaggcc ggtcatcgcc
     3361 gcgcccatgg cggcgccgag gatcgcctgc tccgagatcg gcgtgtcgcg cacgcgcacc
     3421 ggtccgaact gctcgaacag tccgacggtc gccttgaaca cgccgcccgc cttgccgatg
     3481 tcctcgccaa ggaaaaccac gtcgggatcg cgcgtcatct cctgggcgat gccgcgaatg
     3541 acggcgtccc ggtaggtcag ttccgccatg cgaaacctcc gtcggcgtag acgtccttgg
     3601 tgagaatatc ggcgggcggc agcggggcgg ccttgcattc ctcggtcgct tcgtcgacgc
     3661 gccgtttcac gtcggtctcg atgcggacga tttcctcctc accgatgccg aactgcttga
     3721 gccgttcacg atagatcttc agcggatcgc gctccttcca gcgctcgagt tcgccctcgg
     3781 gccggtattt agccgggtcg gcgcgcgaat ggccgctgtg gcgataggtc atgcattcga
     3841 tgagcgacgg gccgccgccg gcgcgcgcct tgtcataggc ggagccggcg gtgcggtaga
     3901 cgtcgtcggc atcgttgccg tcgatgacga tgcttggcag cccgtaggcg gcggcgcggt
     3961 cggcggccgg atgcggcacc gcggtcacgt cggcgatcgg cgtgtattcc atgtacagat
     4021 tgttttcgca gacgaacacg accgggagct tccatacgac agcgaaattc agcgcttcgt
     4081 ggaaggcgcc gatattggtg gtgccgtcgc cgaagaagca gaccgagacg tccttgtcgc
     4141 ccttgtactg cgcgcgccag gcggcgccgc aggcgatcgg cagatgcgag ccgatgatgg
     4201 cgtaggaccc catgacgccg tggtcgatcg aggtcaggtg catcgagccg cctttgccgc
     4261 gcatcagccc gatatcgcgc agcatcagct cgcccaaaac cttggcgatt ggcacgccgc
     4321 gggcgagggt gtgggcatgg ccgcggtagg tgcagaagct gagatcgcct tgacgcatgg
     4381 ccgcggcgaa accggtggcg accgcctcct ggccgagcga cagatggctt gtgcccttga
     4441 ccaggttctg caggaagaga tcgtgcgcgc gctgctcggt ctcgcggatc tcaacctgca
     4501 tacgatacat ggtgagccgc tttgcctcgc cgatatcgtc attgaggctc gccggcgatg
     4561 gcggcgcgcg atcctcgatc ttggccatga aatatcctcg gaatgcccgg aaactgcctg
     4621 cggcaggtgc aacttagcgc cacttgcgaa gccgaggcaa cgcccgcgcg cccatcctcg
     4681 ccgcaacgca cggcaagggt ccggcttgcg tgccgtccgg caacttgcct aactggtccg
     4741 gccgctccgc ggtcggcatg cgggagatgg gcgatgcccc aggactatgt tcagcgcttc
     4801 ttcggtgggc cgccgcttgc ggtcatcggg cggctgatcc tgatgtcgat cctggtcggc
     4861 gtgatcctcg ccgccatcgg gcttgatccg tggaacatcg tcgattcggt gcgccggctg
     4921 atctggcacc tgtggaatat gggcttcgat gccgtgcgct ggctctggca gtatttcctg
     4981 ctcggagccg tgatcgttct gccgatctgg cttctggtgc ggctcgccag ggcgccgcgc
     5041 gggggctagc gccggcgacc gccttcggcg tctcgcgccg acgcctgcgg gagcggctcg
     5101 cttgctcggg aagggctcgg ctcagtcgtc gctcgccccg ccggatggat gcggggcgtc
     5161 gttctcgccg gataccgcct gatcgcgcgg cccgcggtgg cggcgacgcc gccggtgcag
     5221 cggaaagcgg tcggccgatc cgtcaaagcc attcgggcca tttgggccgt ttgggccatt
     5281 cggcccgttg ggcccgttgc cgccttgccc ctgttgcggc ggctgctgat gcgcctgtcc
     5341 gccggtgatg aaggagggca gccgttcgac gtcctcctcg cgttgctgcg ggaggtgctg
     5401 cgcgcggggc tgcgggtgct gcggctgcat ttgcgggtgc tgttgctcgc gcggatagaa
     5461 cagctgctgc tcgcgcggcg caaacggttc gccgccgatc gaaggctgct cgttgtcgcc
     5521 gtcgtcgtag ccgtcgtcgg gaagattgcc gcgcggctcg ccctgctgct gaaaataggg
     5581 ctggctctgg cggaactgtt cctgggcggc agcgatcagg cggaagtagt gctccgcgtg
     5641 ctgatagtag ttttccgcgg cgatcgggtc gccggaactc tgcgcgtcgc gcgcgagctg
     5701 aagatatttt tcggcgacgt gggacgccgt tcccctgatc ttcacgtccg gtccgttgga
     5761 ctcgtacatg cgcgataatg gattctggtg atgaccacct ttgcggttgc gaccccgcat
     5821 gcgcttattc tgaccg
//
LOCUS       DATMQB010000067         5390 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3117776, whole genome shotgun sequence.
ACCESSION   DATMQB010000067 DATMQB010000000
VERSION     DATMQB010000067.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5390)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5390)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5390
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3117776"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1032
                     /locus_tag="VNY79_02295"
     CDS             <1..1032
                     /locus_tag="VNY79_02295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015670029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX71310.1"
                     /translation="GDAHSRAFSRRVGAKGWIGMTWPKRYGGHERTYLERYVVTEEFR
                     VANAPVRVHFVADRQSGPILLKYAPEHIKQDILPRICRGELCFVIGMSEPGSGSDLFA
                     AKTKATKTDGGWRINGSKIWTSNAHHADYMLGLFRTSPPTKENRRHGLTQFLVDMKTP
                     GITVNPIYQMTGLHDFNEVVFEDAFVPDDHVMGEIDGAWKQATSELAYERSGPERFLE
                     TFYVLLELIRALGPEPDLRSAEGLGRLVAQLHTLRRMSVSVAGMLQAGKEPVVEGSIV
                     KDLGTMWEQKLPGRVRDLAAFLEPEVMNRATLTEQLAFATMIAPKLTIQGGTTEILRG
                     IIARGLGLR"
     gene            1047..3230
                     /locus_tag="VNY79_02300"
     CDS             1047..3230
                     /locus_tag="VNY79_02300"
                     /inference="COORDINATES: protein motif:HMM:NF024938.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate--CoA ligase family protein"
                     /protein_id="HWX71311.1"
                     /translation="MPDIGKLLWPRSVAVVGASSNTHGLRGRIFEIMRSHPFAGQLYP
                     VSRSAAEVQGVKAYPSVDALPQAADLAMLIVPAEYVPAELERCGRAGIKAAVILSSGF
                     AEEPGGAGAHMQREIIATAQRYDMAVGGPNTEGFANIAAGLCANFSPAMDKDAGPLLP
                     ARPLGDGQVSMISQSGGLGFAFFDRARPRNFRFRYIVTTGNEAVLESADFIDYMLDEG
                     ETDVFLLLVEAVKTPEKFKRVAEKALKAGKPLIVRKIGQSAPGSRAVASHTAALAGSQ
                     AAYRAMFERYGLIEGGDFEEMLDLASGFLACGDRMPAGNRVGICTSSGGAGVWMADAC
                     AAAGLEVPVLDDATRATIDVHLPSYATSQNPVDSTAQGVQKLGYATFARLVAHSPSVD
                     GVVVVITARRSAFLEADLPKLKDLARESRKPVFMWTYTLPSPRTVEILNEAGYPLFTS
                     AHGCARTLRAMADYQILRERLLRPIEIVPAGREAHANARAMLAEPGPVLCEYRARPLL
                     AAYGIGSGDAGKLAHSAEEAVATAQAIGRPVALKVQSADIPHKTEAGAVALGLTGAEA
                     VRAAYDRVLAAARQHAPRAHIDGVLVQPMAPSGREVILGVNRDPTWGLLLMVGLGGVL
                     VEALGDVALAPVPLDHPAARALIDRLKGAQVLGPYRGQPPADAEALVDLMVRLSQFAA
                     DHGDALAEIDLNPVIVHPRGEGVSVVDALIVKRSAEPAQRRGAAE"
     gene            3251..4045
                     /locus_tag="VNY79_02305"
     CDS             3251..4045
                     /locus_tag="VNY79_02305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HWX71312.1"
                     /translation="MGPFKDIAVEKSGHVALVEIRRPPHNFFDVPLIKEIATAFEALD
                     DDADCRVLVLAAQGKAFCAGANFGDSSILDREGARPGERAPGVAPLYVEGNRLFRTKK
                     PIVAAVHGPAVGGGLGLAMVADFRVTCPEARFCANFTRLGFHPGFGLTVTLPAVIGPT
                     KAALLFYTSRRVPGDEAHAMGLADVLVPQDQVRTAALSLAAEIAENSPLGLEATRATL
                     RGDLADRVRAATDHELEEQNRLRKTDDFKEGVKAMAERRVPVFANR"
     gene            4126..>5390
                     /locus_tag="VNY79_02310"
     CDS             4126..>5390
                     /locus_tag="VNY79_02310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HWX71313.1"
                     /translation="MALPRLKHFGWGREGEGLTADETAFVLGRIQARFGPGAEREVKP
                     PPLEDIKLEPPRLKVPPSLPFCTTEHYDRAAHAHGKSFPEYVRGLLGDYSSAPDVVAY
                     PRTEADVAAVLDWAGGAQASVTPFGGGSSVVGGVEPVRDAVRHKAAVTVDLRELGRVL
                     EVDKTSRAARIEGGAFGPALEAQLKPHALTLRHFPQSFECSTLGGWIATRSGGHFATL
                     YTHIDDLVESLRAVTPKGVIETRRLPGSGAGPSPDRLLIGSEGILGIITQAWMRLQDR
                     PKFRAGGAVQFPDFFTAARALRAISQAGLYPANCRILDAEEAFNTGAADGSVAIMVLA
                     FESGDHPLEPWMARARECCAAHGGKADAGDAADAHRAGAAGAWRNAFIRMPFGRERTI
                     ERGVINDTFETAITWERFEAFHDNVKAAT"
BASE COUNT          886 a         1832 c         1804 g          868 t
ORIGIN      
        1 ggcgatgccc acagccgcgc cttcagccgg cgcgtcggcg ccaagggctg gatcggcatg
       61 acctggccga agcgctacgg cggccatgag cgtacttacc tggaacgcta cgtggtcacc
      121 gaggaattcc gcgtcgccaa cgcgccggtg cgtgtccact tcgtcgccga ccgccagagc
      181 ggcccaatcc tgctcaaata cgcgcccgag cacatcaagc aggatattct gccgcgcatc
      241 tgccgcggtg aattgtgctt cgtcatcggc atgagcgagc ccgggtccgg ctccgacctg
      301 ttcgcggcta agaccaaggc gaccaagacc gacggcggct ggcgcatcaa cggttccaag
      361 atctggacca gcaatgccca tcatgccgac tacatgctcg gcctgttccg cacctcgccg
      421 ccgaccaagg agaaccgccg gcacgggctc acgcaattcc tcgtcgacat gaagacaccg
      481 ggcatcaccg tcaacccgat ctatcagatg accgggctgc acgatttcaa cgaggtcgtg
      541 ttcgaggatg cgttcgtgcc ggacgaccac gtcatgggcg agatcgacgg cgcctggaaa
      601 caggcgacga gcgagctcgc ctacgagcgc agcggaccgg agcgcttcct cgaaaccttc
      661 tacgtcctgc tcgagctgat ccgcgcgctt ggacccgagc ccgacctgcg cagcgccgaa
      721 gggctcggcc gtctggtcgc gcagctgcac acgttgcggc gcatgtcggt atcggtcgcc
      781 ggcatgctgc aggccggaaa ggagccggtg gtggaaggct ctatcgtcaa ggacctcggc
      841 accatgtggg agcaaaagct gcccggccgc gtgcgcgacc tggccgcctt cctcgaaccc
      901 gaggtcatga accgcgcgac gctcacggag cagcttgcct ttgccacaat gatcgcgccc
      961 aagctcacaa tccagggcgg caccaccgag atcctgcgcg gcatcatcgc gcgcgggctc
     1021 ggcttgcggt gagaggcgcg gcggccgtgc cggacatcgg caaattgctg tggccgcgct
     1081 ctgtagcggt ggtcggcgct tcgtcgaaca cgcacggtct gcgcggccgg attttcgaga
     1141 tcatgcgcag ccatccgttt gccgggcaac tctatccggt gagccgcagc gcggccgaag
     1201 tgcagggtgt gaaggcctac ccatcggtcg acgcgctgcc gcaagcggcg gacctcgcca
     1261 tgctgatcgt gcctgccgaa tatgtgccgg ccgagcttga gcgttgcggc cgcgccggca
     1321 tcaaagccgc cgtcattctc agctccggct ttgccgagga gccgggcggc gccggcgcgc
     1381 acatgcagcg cgagatcatc gcgactgcgc agcgctacga catggcggtg ggcgggccga
     1441 acacggaggg ttttgccaat atcgcggccg gactgtgcgc caacttcagc ccggccatgg
     1501 acaaagatgc ggggccgctc ctgcccgccc gcccgctcgg ggacggccaa gtgtcgatga
     1561 tctcgcagag cggcggcctc ggctttgcgt tcttcgaccg cgcacggccg cgcaatttcc
     1621 ggtttcgcta catcgtcacc accggcaacg aagccgtgct cgagagtgcc gacttcatcg
     1681 actatatgct ggacgaaggc gagaccgacg tctttctgct gctggtcgaa gcagtcaaga
     1741 caccggaaaa attcaaacgc gtcgcggaaa aggcgctcaa ggccggaaaa ccgctgatcg
     1801 tgcgcaagat cgggcagtcg gcgccaggga gccgcgcggt tgcttcgcac accgccgcac
     1861 tcgccggctc gcaggccgcc taccgcgcca tgttcgagcg ctacgggttg atcgaaggcg
     1921 gcgatttcga ggagatgctc gatctcgcct caggcttcct cgcctgcggc gaccgcatgc
     1981 cggccggcaa tcgcgtcggc atctgcactt cctcaggggg cgcgggtgtt tggatggccg
     2041 atgcctgcgc cgcggcaggg cttgaagtgc cggtgctcga tgacgcgacg cgcgcgacga
     2101 tcgacgttca cctgccttcc tacgccacct cgcagaaccc ggtcgattcc accgcccagg
     2161 gcgtgcagaa gctcggctat gcgacgttcg cgcgcctggt agcgcactcg ccatcggtcg
     2221 acggcgtcgt cgtggtgatc acggcgcgcc gctcagcgtt tcttgaagcc gatctgccga
     2281 agctcaagga ccttgcgcgg gagtcgcgca agccggtgtt catgtggact tacacgttgc
     2341 cgtccccgcg cacggtcgag atactcaacg aggcgggcta tccgctgttc accagcgcgc
     2401 acggttgtgc gcgcacgctg cgcgcgatgg ccgactatca gattttgcgc gaacgtttgc
     2461 tgcgcccgat cgaaatcgtg ccggcgggcc gggaggcgca tgccaatgcg cgggccatgc
     2521 tggccgagcc tggcccggtg ctatgcgagt accgggcgcg gcccttgctg gcggcctatg
     2581 gcatcggcag cggcgatgcg gggaagctcg ctcactcggc cgaggaggcc gttgcaaccg
     2641 ctcaagcaat cggacgtccc gttgcgctca aggttcaatc cgccgacatc ccgcacaaga
     2701 ccgaggccgg tgcggtcgcg ctcggtctta ccggggctga agccgtgcgc gcggcctatg
     2761 atcgcgtgct cgccgcagcc aggcagcacg cgccgagggc gcatatcgat ggcgttctgg
     2821 tgcagccgat ggcgccgtcc ggtcgcgagg tcattctcgg cgtcaaccgc gatcccacct
     2881 ggggattgtt gctgatggtt ggcctcggcg gcgttctggt cgaggcgctc ggcgacgtgg
     2941 cgctcgcgcc ggtgccgctc gatcaccctg ccgcccgcgc gctcatcgac cgcctcaagg
     3001 gcgcgcaggt gctcggtcct tatcgcgggc agccgccggc ggacgccgag gcgctcgtcg
     3061 acctcatggt gcggctgtcg cagttcgccg ccgatcatgg cgacgcgctc gccgaaatcg
     3121 atctcaaccc cgtcatcgtc catccgcgcg gcgaaggcgt ttcggtcgtg gacgcgctga
     3181 tcgtcaaacg cagtgccgag ccggcacaac ggcgcggcgc ggccgagtag caacaggcga
     3241 ggaaactccc atgggtccgt tcaaggatat cgccgtcgaa aaatccggcc acgtggcgct
     3301 ggtggagatc agacgccccc cgcacaactt tttcgatgtc ccgctgatca aggagatcgc
     3361 cacggccttc gaggcgctcg acgacgacgc cgattgccgc gtgctggtgc tggcggcgca
     3421 gggaaaggcg ttctgcgccg gcgccaattt cggcgacagc agcattctcg accgcgaggg
     3481 cgcccgcccc ggcgaacggg cccccggcgt cgcgccgctc tacgtcgaag gcaacaggct
     3541 cttccgcacc aagaagccga tcgtcgcggc ggtccacggc cctgcggtcg gcggcgggct
     3601 cgggttggcg atggtcgccg atttccgcgt cacctgcccc gaggcgcgct tctgcgccaa
     3661 cttcacccgg ctcggctttc atccgggatt cgggctgacc gtcactttac ccgcggtgat
     3721 cggcccgacc aaggcagcgc tgttgttcta taccagccgc cgcgtccctg gcgacgaggc
     3781 gcatgccatg ggtctcgccg acgtgctggt gccgcaggac caagttcgca ccgccgcgct
     3841 gtcgcttgcc gcagagatcg ccgagaattc accactcggg cttgaggcga cacgagcgac
     3901 cttgcgcggc gatcttgccg accgcgtccg cgccgcgacc gatcacgagc tcgaggagca
     3961 gaaccggctg cgcaagaccg acgatttcaa ggaaggcgtc aaggcgatgg ccgagcggcg
     4021 ggtgcccgtg ttcgcgaacc gctagcggct cagtggatag cggatgtcaa atccgctccg
     4081 ctagaatgtt gcgctacgaa gccaaagaaa gcgggaggaa aagcaatggc gctgccacgg
     4141 ctgaaacatt tcggatgggg ccgtgagggc gagggcctga ccgccgacga aacggccttc
     4201 gtgctcggac gcatccaagc gcggttcggc ccgggggcgg agcgcgaagt caaaccgcca
     4261 ccgctcgaag acatcaagct cgaaccgccg cggctcaagg tgccgccatc gctgccgttc
     4321 tgcaccaccg aacactatga tcgcgcggcg cacgctcacg gcaaatcgtt ccccgaatac
     4381 gtccgcgggc ttctcggcga ctattccagc gcgccggatg tcgtcgccta tccgcgcacc
     4441 gaggcggacg tcgcggcggt gctcgattgg gccggcggtg cgcaggcgag cgtgacaccg
     4501 ttcggcggcg gatcgagcgt cgtcggtggc gtcgagccgg tacgcgatgc ggtgcggcac
     4561 aaggcggcgg tgaccgtcga tctccgcgag cttggccgcg tgctcgaagt ggacaagacc
     4621 tcgcgcgcgg cgcgcatcga agggggcgct ttcggaccgg cgctcgaggc gcagctcaaa
     4681 ccgcacgcgt tgacgctacg ccacttcccg cagagtttcg agtgctcgac gctcggcggc
     4741 tggattgcga cccgttcggg cggtcatttc gcaacgctct acacccacat cgacgatctc
     4801 gtggaatcgc tgcgcgccgt cacgccgaag ggcgtgatcg agacgcggcg gctccccggc
     4861 tcgggcgcgg gaccgagccc cgaccgtctg ctgatcggct cggagggcat tctgggcatc
     4921 atcacgcagg cctggatgcg gctgcaggat cggccaaaat tccgcgccgg cggcgcggtg
     4981 caattcccgg atttcttcac tgcagccagg gccttgcgag cgatctcgca agcagggctt
     5041 tatccggcga attgccgcat cctcgacgcc gaggaggcgt tcaacaccgg cgctgccgac
     5101 ggcagtgtcg cgatcatggt gcttgccttc gagtccggcg accatcccct cgagccgtgg
     5161 atggcgcgcg cccgcgaatg ctgcgccgcc cacggcggca aggcggacgc cggcgatgcc
     5221 gccgatgctc atcgcgcggg cgcggccggc gcctggcgca acgcgttcat ccgcatgccc
     5281 tttgggcgcg agcgcaccat cgagcgcggc gtcatcaacg atacgttcga gaccgccatc
     5341 acctgggagc gcttcgaggc cttccacgac aacgtcaagg ccgcaacgga
//
LOCUS       DATMQB010000068         6827 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1568186, whole genome shotgun sequence.
ACCESSION   DATMQB010000068 DATMQB010000000
VERSION     DATMQB010000068.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6827)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6827)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6827
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1568186"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(10..723)
                     /locus_tag="VNY79_02315"
     CDS             complement(10..723)
                     /locus_tag="VNY79_02315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX71314.1"
                     /translation="MTPLFEIENLHVAYGKVEAVRGVSLVMQPGQIVAVIGPNGAGKT
                     TLLAAAAGLLRWRGRVMYDGLDLARLDVEERVERGLCLVPERRELFGDMAVADNLLLG
                     AYSRRGNAADQSLRQVYDRFPRLAERRRQKAQTLSGGERQMLALGRALMAKPRLLLLD
                     EPSLGLAPMMVREILRMVASLREIGVSILLVEQNARAALETADYGYVLETGEITHQGP
                     PAVLANDARVVATYLGGST"
     gene            complement(720..2486)
                     /locus_tag="VNY79_02320"
     CDS             complement(720..2486)
                     /locus_tag="VNY79_02320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     ATP-binding protein/permease"
                     /protein_id="HWX71315.1"
                     /translation="MSAHATRLAAFAVIAALAAAPFWASPFTITLLNYIGIYALVALG
                     VVLLTGVAGLTSFGQAAFVGIGAYATAWLTTAAGASPWFGLAFAFVLTGLVATLLGAV
                     TLRLGGHFLPLGTIAWGLSIYFLFGNMDALGGHNGIAGVPPISIGPLSLERTNAIYYL
                     IWSVLAGATTLIANLLDSRAGRAIRSLRGGVVMVESLGISVFRIRLVTFVIAALLAGL
                     SGWLYAHMERFVSPAPFDVRMGIQYLFMAILGGSGHILGAVVGAALLTMLTNALQDLL
                     PHFARNGAQLEVIVFAVIYVLVLQFARGGVMPFVLRHLPRRVEPAVASAEPLQRRTMP
                     KPGEPLLVVKSLGKRFGGLEAVSRVGFEVSAGEIVGLIGPNGAGKSTVFNLVTGALSV
                     DAGAIFFLGHDITHAGQRRIAGAGIARTYQHVKLRTNMSLVDNVLLGTYLRTGAGFLR
                     GALRLDRAEEARARAEALRQLERVGLGANPHEPAGNLPLGRQRILEVARALAADPALI
                     MLDEPAAGLGRTEKGALADLMRAVRADGVTVLLVEHDMEFVMGLADRIVVMDFGSKLV
                     EGTPAAVRADPRVQEAYLGSVA"
     gene            complement(2483..3535)
                     /locus_tag="VNY79_02325"
     CDS             complement(2483..3535)
                     /locus_tag="VNY79_02325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX71316.1"
                     /translation="MTPDIALILGIDGIATGSIYVLVGLGLVLIFSVTRVVFVPFGDI
                     VAFSALTLASMQLGRLPGTVYLVAVLAILACGVDAIHHLRRGRPDRIARGLLGYGVLP
                     LIPAAAAWLFAGASLPAWAQIPLTIALVVPIAPLIERIALRPIADASVLLLLIVSVAL
                     TFGLSGLGLLFFGPEGFRTKPLTSEVFRFGTVAVTSQTLLMVATAVVFSLLLFLFFEH
                     TLLGKALRATSVNRVGARIVGIRPASTATLAFLLASLLGATSGILIGPVTTLYYDSGF
                     IIGLKAFVGAIIGGLVSYPGTAVGAILVGILESFASFWNSALKEVVVFSVLIPVLLLR
                     SLSLPQADEEDAEIEA"
     gene            3761..4918
                     /locus_tag="VNY79_02330"
     CDS             3761..4918
                     /locus_tag="VNY79_02330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX71317.1"
                     /translation="MNKFLRSVGGVTIASLLALPAGAAEIRVGLITSMTGPGASIGIP
                     YSKGTAAGQVYRDDVNGIKLKVEQLDDTSDPSIGTRDARKLIEQDNVDVLMGAGNTPI
                     TLAIVAVSREQKVPLIALVPTGNLPGDSGSWMISIPQPAPLMVAAVVERMKATGAKTV
                     GYIGYNDAWGDLVYDALKKTAEPAGMQIVTNERYARADTSVTAQALRIVAAAPEVVMT
                     GGSGTPGALPFIALTERGYNGQIYGTHALINPDFVRVGGAAVEGVICPTGPVVVASQL
                     PQSNPIRKVALDYEAAYQKANNEPARGAFGPYAFDGWLIMLDAAKRALATGAQPGTPQ
                     FREAMRDAIVTTKDLVGTHAIYNFAPGTATGVDDRARVLVKLVDGKWKLTE"
     gene            complement(4908..5366)
                     /locus_tag="VNY79_02335"
     CDS             complement(4908..5366)
                     /locus_tag="VNY79_02335"
                     /inference="COORDINATES: protein motif:HMM:NF013052.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SET domain-containing protein-lysine
                     N-methyltransferase"
                     /protein_id="HWX71318.1"
                     /translation="MSSPIFRIGRSKTGLGLFATRPIKRGSYIATYRGRRVTSEEADR
                     REARGARYMFALNKRWTIDGSPRWNVARYINHSCRPNAKPVGRKGRIVIVALRRIDLG
                     EEITYDYGAEYRKFFLDNGGCRCAACIRRKALRRKRARMRRALEAAALTR"
     gene            complement(5454..>6827)
                     /locus_tag="VNY79_02340"
     CDS             complement(5454..>6827)
                     /locus_tag="VNY79_02340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HWX71319.1"
                     /translation="LHEHGLRIVERRAQNFLPLPDGRYLLTGPGRTEREIAKFSAKDA
                     ARYSPYQAEIGRVVQVLRSLLLTAPPNPVPHGFSHAMREFGKMAAIGGRLWKGGSLQA
                     AFRLLRKSAGEMLDSWFESDPIKAVLGFDAVVGNLASPYAQGSAYVLLHHVMGEVNGQ
                     QGAWGHAIGGMGAITGAMASAAGEHGVRIDVRTEVRQVIAENKRAAGVVLKDGTAVRS
                     RAVVANTDPRQLFQALLPRNAVPRTMSARMQAWKAGSGTFRMNVALSKLPNFSALPGP
                     GDHHTAGIILAPSLSYMDQAYRDCIRHGWSQMPIIEMVIPSTLDDSLAPHGAHVASLF
                     CQHVTPQFADGSTWDEHRETVADLMIDTVESYAPGFKATVVARQSLSPLDLERIFSLP
                     NGDIFHGAMTLGQLFSARPMLGYADYRMPIAGLYLCGSGAHPGGGVTGAPGHNAAQAV
                     IADLVRK"
BASE COUNT         1311 a         2195 c         2261 g         1060 t
ORIGIN      
        1 cgcgcgccat caggtcgacc cgccgagata ggtcgcgacc acgcgcgcat cgttggcaag
       61 caccgccggt ggaccctgat gggtgatctc gccggtttcg agcacgtagc cgtaatcggc
      121 ggtttcaagc gcggcgcgcg cgttctgctc gaccagcaag atcgagacgc cgatctcgcg
      181 cagcgaggcg accatgcgca atatctcgcg caccatcatc ggcgccaatc ccaggctcgg
      241 ctcgtccagc aacaacagcc gcggctttgc catcaaggca cgcccgagcg ccagcatctg
      301 ccgctctccg ccggagagcg tctgcgcctt ctggcgccgg cgctcggcga ggcgcggaaa
      361 acggtcgtag acttgccgca ggctctgatc ggcggcgttg ccacgacgcg aataggcgcc
      421 gagcagcaga ttgtccgcga ccgccatgtc gccgaacaac tcgcgccgct ccggaacgag
      481 gcagaggccg cgctcgacgc gttcctcgac gtcgaggcgg gcgaggtcga ggccgtcata
      541 catcacccgc ccgcgccagc gcagcagacc ggcggcggcc gcgagcagcg tcgtcttgcc
      601 ggcgccgttc gggccgatga cggcgacgat ctggcccggc tgcatgacga gactgacgcc
      661 gcgcacggcc tcgaccttgc cgtaggcgac gtgcaagttc tcgatctcga agagcggcgt
      721 catgccacgc tcccgagata ggcttcctgc acccgcggat cggcacgcac ggcggccggc
      781 gtgccctcga cgagcttgga gccgaaatcc atcaccacga tgcgatcggc gagccccatg
      841 acaaactcca tgtcatgctc gaccagcagg acggtgacgc cgtccgcgcg caccgcgcgc
      901 atgaggtcgg cgagcgcgcc cttttccgtt cggcccaagc cggcggccgg ctcgtcgagc
      961 atgatgagcg caggatcggc ggcaagcgcg cgggcgactt cgaggatgcg ctggcggccg
     1021 agcggcagat tgcccgccgg ttcatgcgga ttggcgccga gcccgaccct ttcgagctga
     1081 cgcagcgctt cggcgcgcgc ccgcgcttcc tcggcgcggt cgagccgcag cgcgcccctg
     1141 agaaagccgg cgccggtccg caggtaggtg ccgagcagca cgttgtcgac gagcgacatg
     1201 ttcgtgcgca gcttcacgtg ctgataggtg cgggcgatgc cggcgccggc gatccggcgc
     1261 tgccccgcat gggtgatgtc gtggccgaga aagaagatcg cgccggcgtc gaccgacagc
     1321 gcgccggtga cgaggttgaa tacggtgctc ttgccggcgc cgttcgggcc gatcaggccg
     1381 acgatttcgc ccgcgctgac ctcgaacccg accctgctga cggcttcgag gccgccgaag
     1441 cgcttcccga gcgatttgac gacgagcagc ggctcacccg gtttcggcat cgtccgcctt
     1501 tgcagcggtt cggcgctcgc gactgccggc tcaacgcggc gcggcagatg gcgcagcacg
     1561 aacggcatca cgccgccgcg ggcgaattgc agcacgagca cgtagatgac ggcaaagacg
     1621 atcacttcga gctgcgcgcc gttgcgcgcg aagtgcggca gaagatcctg cagcgcgttg
     1681 gtcagcatgg tgagcagcgc cgcgccgacc acggcgccca gaatatgtcc cgaaccaccg
     1741 aggatggcca tgaacagata ttggatgccc atgcgcacgt cgaacggcgc cgggctgaca
     1801 aatcgttcca tgtgggcgta gagccagccc gataggccgg cgagcagcgc ggcaatgacg
     1861 aaggtgacga ggcggatgcg aaatacgctg atgcccaggc tctccaccat cacgacgccg
     1921 ccgcgcaggc tgcggatggc gcggccggcg cgggagtcga ggaggttggc gatcagggtg
     1981 gttgcgcccg cgagcacgct ccagatcagg taatagatgg cattggtgcg ctcgagcgac
     2041 agcgggccga tcgagatcgg cggcacgccg gcgatgccgt tgtggccgcc gagcgcgtcc
     2101 atgttgccga acaaaaagta gatcgacagg ccccaggcga tggtgccgag cggcaggaag
     2161 tggccgccaa gccgaagcgt caccgcgccg aggagcgtcg cgaccaggcc ggtgagaacg
     2221 aacgcgaacg caagcccgaa ccacggcgag gcgccggccg ccgtcgtcag ccaggccgtg
     2281 gcataagcgc cgatgccgac gaaggccgct tgtccgaagg aggtgaggcc ggcgaccccg
     2341 gtcagcagca cgacccccag cgcgaccagc gcgtagatgc cgatgtagtt gagcagcgtg
     2401 atggtgaacg gcgacgccca gaacggcgcc gcggccaggg ccgctatcac ggcgaatgcc
     2461 gcgaggcggg tcgcatgggc gctcatgcct cgatctccgc gtcctcctcg tcggcctgcg
     2521 gcagcgacag cgaacgcagc agcagcaccg ggatcagcac gctgaacacc accacctcct
     2581 tgagcgcgct gttccagaac gacgcgaagc tttcgagaat gccgaccagg atggcgccga
     2641 ccgccgtccc cggatagctg acgaggccgc cgatgatcgc gccgacgaaa gccttgagcc
     2701 cgatgatgaa gccggaatcg tagtagagcg tcgtcaccgg gccgatcaga atccccgatg
     2761 tagcgcccag gagcgaggcg agcaggaacg cgagcgtcgc cgtgctcgcc ggccggatac
     2821 cgacaatgcg cgcgccgacg cgattgaccg aagtggcgcg cagcgccttg ccgaggagcg
     2881 tatgctcgaa gaacagaaac agcagcaggc tgaacactac ggcggtcgcg accatcagca
     2941 gcgtctgcga ggtgaccgcc acggtgccga aacggaagac ttcgctggtc agcggcttgg
     3001 tgcggaaacc ctccggtccg aagaacagca aacccaatcc ggaaagaccg aaggtcagcg
     3061 cgaccgacac gatgagcagg agcagaacgg atgcgtcggc gatcggccgc agcgcgatgc
     3121 gttcgatgag cggcgcgatc ggcacgacaa gcgcgatggt aagcgggatc tgcgcccagg
     3181 ccggcaggct tgcgccggcg aacagccacg ccgcggcggc ggggatgagc ggcagtacgc
     3241 cgtagccgag gaggccgcgg gcaatgcgat cgggccggcc gcggcgcagg tggtgaatag
     3301 catcgacacc gcaagccagg atcgccagca cggcgacgag atagaccgtg cccggcaagc
     3361 ggccgagctg catcgaggca agcgtaagcg ccgagaaggc gacgatgtcg ccgaacggga
     3421 cgaagacgac gcgggtgacc gagaagataa gcacgagccc aagcccgacc agaacgtaga
     3481 tcgatccggt ggcgatgccg tcgatgccga gaatgagcgc gatgtcgggg gtcatgcgtg
     3541 ctccaacggc tcaccggcgg cgcggcattg gcccgcgacc ggtgttgcga ttttgcgggt
     3601 ctaaagtcgc aagcacgaca gccagcgcga gccccgaacc gctcgtcgag attcgacaaa
     3661 accattgcga ctgcgttgtt acaagcctaa aaagattggc ccgcacgcgc ttgccgacgg
     3721 tgccgaacgg cccgcatcag cagctaattg ggaggcgttc gtgaacaaat ttctccgttc
     3781 cgtcggcggg gtgacgatcg cttcgctgct ggcgcttccc gccggcgccg ccgagatcag
     3841 ggtcggctta atcacgtcga tgactggtcc cggcgcctcg atcggcattc cctattccaa
     3901 ggggacggcg gcgggccaag tgtacaggga cgacgtcaac ggcatcaagc tcaaggtcga
     3961 gcagcttgac gacacttcgg atccttccat cggcacgcgc gatgcccgca agctcatcga
     4021 gcaggacaac gtcgacgtgc tcatgggcgc cggcaacacg ccgatcacgc tggcgatcgt
     4081 cgccgtctcg cgcgagcaga aagtcccgct gatcgcgctc gtgccaacgg ggaatctgcc
     4141 cggcgattcc ggttcgtgga tgatttccat tccgcagccc gcgccgttga tggttgccgc
     4201 ggtggtcgag cgcatgaagg cgaccggtgc caagacggtt ggctacatcg ggtacaacga
     4261 cgcttggggt gacctcgtct atgacgcgct gaaaaagacc gcggagcccg ccggcatgca
     4321 gatcgtgacc aacgagcgct acgcgcgtgc cgatacttcg gttaccgcgc aggcgctgcg
     4381 catcgtcgcg gcggcgccgg aagtggtgat gaccggcggt tcggggaccc ccggcgcgct
     4441 gccgttcatt gccctcaccg aacgcggcta caatgggcag atctacggca cccatgcact
     4501 gatcaatccg gatttcgtgc gcgtcggcgg cgccgcggtc gaaggggtga tctgcccgac
     4561 cgggcctgtc gtggtggcga gccagcttcc gcagtcgaac ccgatccgca aggtggcgct
     4621 cgactacgag gccgcgtatc agaaggccaa caacgagccg gcgcgcggcg cgttcggccc
     4681 ctacgcgttc gatggctggc tgatcatgct cgatgcggcg aagcgcgcgc tcgcaaccgg
     4741 cgcgcaaccg ggcacgccgc aattccgcga ggcgatgcgc gacgccatcg tcaccaccaa
     4801 ggatctggtc ggcacgcatg cgatctataa tttcgcgccc ggcaccgcca ccggcgtgga
     4861 cgatcgcgcg cgcgtgctgg tgaagctcgt cgacggcaag tggaagctca ccgagtgagc
     4921 gctgcagcct ccagtgcgcg gcgcatccgt gccctcttgc gccgcagagc ttttcttctg
     4981 atgcatgctg cacagcggca gccgccgttg tcgagaaaga atttccgata ttcagcgcca
     5041 tagtcgtagg taatctcttc cccaagatcg atccggcgca atgcgacaat cacgatcctt
     5101 cctttccgtc caacgggttt ggcatttggc cggcatgaat gattgatgta acgcgccaca
     5161 ttccatcgtg gcgagccatc aatggtccac cgcttgttga gtgcaaacat atatcgcgcg
     5221 ccgcgcgcct cgcgtcggtc agcttcttca ctggtaacgc gccgcccgcg ataggtagca
     5281 atatagctcc ctcgcttgat cggtcttgtg gcgaagagcc cgagtccggt cttggatctg
     5341 ccaattcgaa agatgggcga tgacatagac cgcgcaataa ctacaaatgg ctgtggtgtc
     5401 acgcatgacc tttggcaatt gacagatttc ttggcgcgat cgaggcagta gtctcacttg
     5461 cgcacaagat ccgcgatcac cgcctgcgct gcgttgtgcc ccggagcacc cgtcacgccg
     5521 ccgcccggat gcgcacccga gccacacaga taaagtccgg caatgggcat tcggtaatca
     5581 gcgtatccca gcatcggtcg agcggaaaaa agctgaccga gcgtcatggc gccgtggaaa
     5641 atgtcgccgt tgggcaagct aaagatgcgc tccaaatcca atggcgagag gctctgccgg
     5701 gcaactacgg tggccttgaa accgggagcg taggattcga cggtgtcgat catcaagtca
     5761 gccacggttt cacggtgctc gtcccaagtc gaaccatcgg cgaattgcgg ggtcacgtgc
     5821 tggcagaaaa ggcttgcaac atgcgcgccg tgcggcgcga ggctgtcatc aagcgtagag
     5881 ggaatcacca tctcgatgat cggcatttgg ctccagccgt gacggataca gtcgcgatag
     5941 gcttgatcca tataggagag gctcggagcc aggatgattc cggcagtatg atgatcgccg
     6001 ggtccgggca gtgcggaaaa attcggcagc ttggaaagtg cgacattcat gcggaaagtc
     6061 ccggaaccag ccttccacgc ttgcatgcga gcagacatcg tgcgcggcac cgcattacgc
     6121 ggcagaaggg cctggaagag ctgtcgcggg tcagtattgg cgacgaccgc tcgcgatcgc
     6181 accgccgtgc catccttaag tacgacgccg gccgcgcgct tgttctcggc gatgacctgg
     6241 cgcacttcgg tgcgtacatc aattcggacc ccgtgttccc ccgccgcact cgccatcgcg
     6301 ccggtaatgg cgcccatgcc gccaatcgcg tgcccccacg cgccctgttg tccgtttact
     6361 tcgcccatga cgtgatggag tagcacatag gcagaacctt gcgcgtaggg gctcgcgagg
     6421 ttgccaacga cggcgtcaaa gccgagcact gccttgatag gatcagattc gaaccagctg
     6481 tcgagcattt cgccggctga cttgcgcagc agacggaaag cggcctgcaa actgccgcct
     6541 ttccataacc tcccgccgat agctgccatt tttccgaatt cgcgcatggc atgagagaag
     6601 ccgtgcggta ctggattggg cggcgcggtc agcaaaaggc tgcgcaatac ctgcacgacg
     6661 cgcccgattt cggcctggta gggagaatag cgagccgcat ccttggcgct gaacttcgcg
     6721 atttcgcgct cggttcggcc cggtccggtg agcagataac gtccgtctgg cagcggtaaa
     6781 aagttctgcg cgcggcgctc gacaatgcgc agcccatgtt catgcaa
//
LOCUS       DATMQB010000069         2427 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1260985, whole genome shotgun sequence.
ACCESSION   DATMQB010000069 DATMQB010000000
VERSION     DATMQB010000069.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2427
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1260985"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..188
                     /locus_tag="VNY79_02345"
     CDS             <1..188
                     /locus_tag="VNY79_02345"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71320.1"
                     /translation="FMPADECLTFARECRRWALETKDKDVREAFLEMAKVWTQLGSQQ
                     QRLSSEVEDPPPSPRAS"
     gene            298..1104
                     /gene="murI"
                     /locus_tag="VNY79_02350"
     CDS             298..1104
                     /gene="murI"
                     /locus_tag="VNY79_02350"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008881 - glutamate racemase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HWX71321.1"
                     /translation="MARRETILVFDSGLGGLTVHREIAAARPGADFVYVADDAAFPYG
                     ALPEKALVARVAGLIGELIGAHRPDIVVIACNTASTIALPELRRRFSTPFVGTVPAIK
                     PACATSVTRRVSVLGTEATVAREYTRALIRDYAQDCRVTLVGSKELAAYAEAELAGAP
                     VGDEALLTEIAACFRDDGGRTDTVVLACTHYPLLIARLRQLSPWPVNFIDPAPAIARR
                     VADLLGPAPSPGAAPGADSTRAIFTSGRAPHAVLAGFGVRAEETAPTSVR"
     gene            1224..2427
                     /gene="oxlT"
                     /locus_tag="VNY79_02355"
                     /pseudo
     CDS             1224..2427
                     /gene="oxlT"
                     /locus_tag="VNY79_02355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019752.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology.
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="oxalate/formate MFS antiporter"
BASE COUNT          343 a          839 c          769 g          476 t
ORIGIN      
        1 gtttcatgcc ggccgacgaa tgtctgacct tcgctcgaga atgccggcgg tgggcgctcg
       61 agaccaagga caaggacgtt cgcgaagcct tcctggaaat ggcgaaagtc tggacccagc
      121 tcggctcgca gcagcagcgg ctgtcgtccg aggttgaaga tccgccgccg tcgccgcgcg
      181 cctcgtgagt gccgcttaca acgggcccgc ccgtctgatc gtccctgcgc cccgccgctg
      241 agcgggaatg acgaagcgat tgcccgcgcc cgattcctcg gtatcttctc ttccgcaatg
      301 gcgaggcggg aaaccatcct ggtctttgat tcgggactcg gcgggctcac cgtccatcgc
      361 gagatcgccg cggcgcggcc gggcgccgat ttcgtctatg tcgccgatga cgcggccttc
      421 ccctacggag ccttgcccga gaaagcgttg gtcgcccgcg tggccgggct gatcggcgag
      481 ctgatcggcg cgcaccggcc cgacatcgtc gtcatcgcct gcaacaccgc ctcgaccata
      541 gcgctgcccg agctgcgccg gcgcttctcg acgccgttcg tcggcactgt gccggcgatc
      601 aagccggctt gcgccacctc ggtcacgcga cgcgtctcgg tgctcggcac cgaggccacg
      661 gtcgcgcgcg aatatacccg cgcgctgatc cgcgactacg cccaggactg ccgggtcacg
      721 ctcgtcggct cgaaagagct tgccgcctac gccgaggcgg agcttgccgg cgcgccggtg
      781 ggcgacgagg cgctgctcac ggagatcgcg gcgtgcttcc gcgacgatgg cgggcgcacc
      841 gacaccgtcg tcctcgcctg cacccattat ccgttgctga tcgcccgatt gcggcagctt
      901 tcgccgtggc cggtgaactt catcgatccg gcgccggcga ttgcgcgccg ggtcgccgat
      961 ctcctcggcc ccgccccttc cccgggcgca gcgccgggcg cagacagcac gcgcgccatt
     1021 ttcacctccg gccgcgcacc gcacgcggtg ctcgccggct tcggcgtccg ggccgaggag
     1081 acggcgccga ccagcgtgcg ctgacgattg cctattcgga tttcggcggc ttaccccaat
     1141 tcggcgttgt cccgcttgtt ccgatgcggg cgcgacgtta cgcttttgcg cgctggcgcc
     1201 ggaggggcag aggcgacacc accatgaacg tcgcaatcca gaccgagcgg gtggcgtggc
     1261 acgccaaccg ctggaatcag ctcattctcg gcatcatcgc gatgatggcg atttcctcgc
     1321 cgcaatatgt ctggacgctg ttcaccggcc cgctcaatca aaaactcgga acgacgctcg
     1381 ccgagttgca gtggacgttc tcgctgctga tcatcctgca gacctggttc tcgccgtttc
     1441 aggcctatct ggtcgaccgc ttcggcccgc gcacgctgat ctcgatcggc gcgctgctgt
     1501 cgggcggcag ctggatcgct tcgggctacg tggacaatct gtgggtgctc tatttcacct
     1561 acggggtgat cggcgggttc ggcaccggca tcatctatgt cggcatcatc ggcctgatgg
     1621 tgcggtggtt tcccgatcgc cgcggactgg cgaccggcct cgccgccgcg ggctacggat
     1681 tcggcgcttt cttcaccagc tttccgatcg acagcatgat caagagctcc ggctatgccc
     1741 acacgttgat cgtctggggc atcgtccagg gcgtgatcgc cgttctggcg gcgcagtggc
     1801 tgcgggtgcc accggaaaac tatcagctcg agagcgccgc gccgccggcc gccgtggcct
     1861 cccagcagac gcaccgcagc tattcaccgc gccagatgct cagaagtccg gtcttctacc
     1921 tcctgttcgt gatgatgagc atgatgtcga cctccggtct catggtcaca tccaatgtcg
     1981 ggccgttcgc caaggaattc ggcgttgccg atatgctggt gctggggatg gcggcgctgc
     2041 cgctttcgct cacgctgtcg cgcgtcacca acggcctaac ccggccgttc ttcggctggg
     2101 tgtccgatca catcggccgc gaagccacga tggcgctcgc cttttcgctg gaggcggtcg
     2161 ccatcctggt gtgttcgcct acatcaatca gcccgctctt ttcgtggtgc tgaccggcct
     2221 cgtcttcttc ggctggggcg aaatcttttc gctgtttccc tcgacgctga ccgatacctt
     2281 cggaccaaaa ttcgcggcga ccaattacgg cttcctctac atcgcgcaag gtgtcggctc
     2341 gatcctgggc ggcccggcgg cggccttcct caagcagtcg accggaagct ggaccgcggt
     2401 gttcatcgtc gtcgcggtcc tggatgt
//
LOCUS       DATMQB010000070        13944 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3119058, whole genome shotgun sequence.
ACCESSION   DATMQB010000070 DATMQB010000000
VERSION     DATMQB010000070.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 13944)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13944)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13944
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3119058"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..462)
                     /locus_tag="VNY79_02360"
     CDS             complement(<1..462)
                     /locus_tag="VNY79_02360"
                     /inference="COORDINATES: protein motif:HMM:NF024750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Arm DNA-binding domain-containing protein"
                     /protein_id="HWX71322.1"
                     /translation="MKMKLTAAVIGRLELPAGKSDDIVFDTTVPGFGVRLRDGGHCSF
                     IFQYKLGSKQRRLSIGSVAAVDFGVACRTAKDLYAQVRLGRDPAGEKERAKRTADETF
                     VAIVTGQYLPHKRRELRPQPYKDVGRHLLRHAKPLHRLQLEKISRRDVAACL"
     gene            complement(609..1931)
                     /locus_tag="VNY79_02365"
     CDS             complement(609..1931)
                     /locus_tag="VNY79_02365"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HWX71323.1"
                     /translation="MKRWMLTAALVGAFLVAAPAAWCQVNLPLPQAQPEQVGVSKEKL
                     DRIHAALSQAIGDGKLAGTVVVVARKGKLIYADAAGFQDKEESKPMALDSIFRIYSMT
                     KPIVSVAAMLLVEDGKIELTDPVSKFLPAFKGQQVSLARADSEFARVTYATVPADREM
                     TVQDLLRHTAGLAYGEITANAPVKEAYAKAGLYLPGVRDYDARDLTPAEEAERLAKAP
                     LAHQPGTVWEYSMAVDLLGRVVEAASGKRLSDFLDERLFKPLKMQDTAFWVPTAKMGR
                     LAQPLAADAASGLPNKLIDVAQEPKNDSGGAGGVSTAIDYLRFAQMLLNGGQLDGARV
                     MSRPTIALMTSDHLGTRIAAPTTPGELLLGTPGYTFGLGFAVRQGGGVAGVPGSAGEF
                     MWAGYAGTYFWVDPKEELVGVYMSQAPSPSRAYYRKLIKQLVYAAIID"
     gene            2205..2960
                     /locus_tag="VNY79_02370"
     CDS             2205..2960
                     /locus_tag="VNY79_02370"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HWX71324.1"
                     /translation="MIDLKTEDGIAVVTLAHGKASALDIELCEALTRCFEELRAPEIR
                     AVVLTGQGRIFSAGVDLVRLSSGGTDYVRKFLPVMNRAFDAVFFLPKPLVAALNGHAI
                     AGGCVLACCADRRLMARGGGRIGVTELLVGVPFPALAFEIVRAAVPSRHFAEFTFGGA
                     TYEADDALARGWVDEIVEADALMENAMAAARRLASLPTFAFAQTKTQMRQPVVERLER
                     SGAAIDKIATEIWAAAETLDRVRDYVARTLKKG"
     gene            complement(2962..3582)
                     /locus_tag="VNY79_02375"
     CDS             complement(2962..3582)
                     /locus_tag="VNY79_02375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxychromene-2-carboxylate isomerase"
                     /protein_id="HWX71325.1"
                     /translation="MIEFFFDCSSPWTYLAFHNIQPMAAELGVPIAWRPILVGGIFNT
                     VNPSVYASRENPVPAKAAYMRKDLADWARAAGLKIVFPPRVFPVNSVKAMRGCLLLEA
                     DGKLTAFARAAFEAYWGDDEDISQDDVLARVADRAGVDPVYLFAGLGEQAVKDRLRAN
                     TEELMRRGGFGSPTMFVGGTDMFFGNDRLALVRAAVERSRKRPAAE"
     gene            complement(3598..4473)
                     /locus_tag="VNY79_02380"
     CDS             complement(3598..4473)
                     /locus_tag="VNY79_02380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX71326.1"
                     /translation="MFKDGLLRGRRILVTGGGTGLGRGMVEKFLALGADIFICGRRKA
                     VCDATAAELTGKYDGRVKSYGVDIRDAGAVDAMVADIFQSGPLTDLVNNAAGNFISRT
                     EDLSTRGFDAVANIVLHGTFYVTHAVGRRWIAGGHRGNVVSIVVTWVYNGSPYVVPSV
                     MSKSGVHAMTMSLATEWAHYGIRLNAIAPGVIPTEGASKRLNPGASPSERAERSNPMG
                     RVGRMEELQNLATFLLADGCEWLTGQTITLDGGQSHATGSNFYELRHWTDAQWQAARA
                     AIKAQNDKDRAQRSV"
     gene            4761..5813
                     /locus_tag="VNY79_02385"
     CDS             4761..5813
                     /locus_tag="VNY79_02385"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HWX71327.1"
                     /translation="MTKGHSWAGIAASLAALAWLGLPTTALAQEESGTKTAHELRADY
                     DKDLKGKTIAFLPIATGVPLMDEWGRVIKTEAEWRGMKFIIRDPALNMSAMQQALTAL
                     VDQKPDVLIVQNPSVTLLMKELKRAESQGIHVIQMNMSSNYKSDAFVGADWYEVGRIL
                     AEDVVKVCGTGSGTSGEVQIVQGELAAAASVDQIAGVMDTLKKDSAVKVVSNQAANWD
                     ANNALNITATVIQQHPNLCASIGFWGIMQSGAAQAIRNAGKIEQVKVYASGEGSQLDC
                     DQVAQGNFHKFLSYTATEQGHDAFLAAEALLEGGTKPGTTHKEFYTRPIWLDKTNASG
                     ANCYPVPKPPTSTASN"
     gene            5894..8047
                     /locus_tag="VNY79_02390"
     CDS             5894..8047
                     /locus_tag="VNY79_02390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HWX71328.1"
                     /translation="MSTTALQAPSRRAPRLGHSFSPRLFLSELLLKQWFEPVIPFTVM
                     VALAVYFSLTIPDYGTLTNALSLMRLFAEFGFVALGMALSLISGGIDLSVGAIFAFCN
                     FTALFCLFVLGLPVGLAIVATLLTGAVIGACNGILIGYLKARPFLTTLVTLIIVRAGV
                     NLLNERYATVFATNSIESDAWDYLGEGSVLGIPINAATLIVVLLIGHVFLSRSRYGWH
                     LTAIGASRKAARHAGIRVERMLLATYVLSGTLCAASGIFYAARQGSTDSTTGVGWEFQ
                     ALTAVIIGGASVLGGRGTVWRALLGAIIIFMMTNGLVRIGIPGYITSSLTGIILLVAI
                     GFDVKWAKNRGKVIQKIYVNPAVLSLSPAPSIERGSKSPYAQNDRLVGAEAIGLDQVE
                     GPEDVILDRQDRLYGSTRDGNIIRFSGPNFEKREVFAHIGGRPYGMQFDKDENLIVCV
                     GGMGVYGVRPSGEVFKVTDETSRTWTKLNDDSRVRMADDLDIAPDGKIYFSDCTTRYE
                     AATYPLEVVEGRPNGRVLCHDPATGKTHKLIKSFYFPNGMCVAHDGRSVLIASTTACR
                     IYRYWLAGPNAGTTEILIDEIPGHPDNINRASDGNYWLALVGVRTPSFDLSMEKAAFR
                     RRMAKQVPTDEWLGPNLNYGSVVKFDEAGNVLESYWDPTGISHATLTSMREHKGDLYL
                     GGLENNRIGRIKLDPAHCDPTWTGYEAYWGNKRRV"
     gene            8052..9170
                     /locus_tag="VNY79_02395"
     CDS             8052..9170
                     /locus_tag="VNY79_02395"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HWX71329.1"
                     /translation="MSFLTYLRRDLEQIFFKDRDPHAIPSMDGAFSPNDRLEQATTIG
                     EPLPGADAVAEAPDGAICVSAANKVWRLSGTGYRDRAVFAEFDGDVGALAFHPDGRLL
                     ACTERGLVAMDAAGRRSVLAEADGEALQCLTAVAVAADGTIFVSDGSTLHPAADWCVD
                     LMEHNARGRIACCRPALDNARVLLSGLNYPGGLVVAPDGHLWFTESFGHCLRRARIAA
                     PGVIGAPEMVIRNMPGYPSRLARAAGGGFWLSLFGVRTHLVEFVLREDDFRNEMMRTV
                     PPAYWIAPIISSTRDCLEPLQLGGLRALGIEKPWAPPRSYGLLARLDADGEVVETLHS
                     RVGGKNHGITSVIETALGVVIVSKGSGRVLLHQSGMRQ"
     gene            9176..10723
                     /locus_tag="VNY79_02400"
     CDS             9176..10723
                     /locus_tag="VNY79_02400"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HWX71330.1"
                     /translation="MAVIDRSAEKVLPQCAREPVLSVSKGSKIYGGVHAIEGVDFDLY
                     PGEVHALVGENGAGKSTLCKAIAGAIRLTSGTYCVDGKPVDFQSPRDALAAGICMVYQ
                     ETSLVPTMTAAQNIELGNEKLLTRFRTLNIQAQQLLQSLNFHVDPAIPVALLGTAKRQ
                     MVEIARAIYNKARIIIFDEPTASLTPEEIVHFFNLVRDLRARGVAVIYISHALEESLK
                     ISDRITVLRDGKLVITAKTSEMTREKLVRHMVGRDITQTHYARQRDGSRRHHSTEKVL
                     AVENVTMGLIVKNMSFSVYAGEVVGIAGLIGSGRTEIAKIVYGALKRNLINGGMIYLR
                     GKPIRYRVPKQAINDGICYITEDRKANGYFETMRIDDNLYVSKLATKAGWSFLVSRFV
                     RNKLASYWIERLKIAALLRKARIVELSGGNQQKVVIAKSLAQDPSIVIFDEPTRGVDV
                     GTIPEIHAQIRRLADEGKAIVVISSYLPEILAVSDRILVARLGRIVAEFDGATATEDK
                     IMYAAIH"
     gene            10749..11765
                     /locus_tag="VNY79_02405"
     CDS             10749..11765
                     /locus_tag="VNY79_02405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX71331.1"
                     /translation="MASVTTTASGKTTPWWRSLNKLSQEQVVAAIVVVLLIVFALALP
                     GFATTRNILGLVRSISILGILGLGMGLIVISRSIDLSEIALMACPWGVALIANQHGLP
                     PFWTAVLALVIAVAVGCINGFMVAFVEAPALFVTLATTLVVYGASYWISPVYVVYAPQ
                     DADALLFAGRGSLFGIPMPIIVFAAAAVVMHFFLSRTSTGRFIYAQGDNPEAAKLSGI
                     ALRPLTILEHVLVALFAWLAGLVWIGQTGNMQTNIVIVGTQIFDVILVVVLGGISLVG
                     GRGGVFSVIVGCALIGTLLNAFTIMDVNTEVQNIIRGVVLLLAIIVDNWLHPRDEETA
                     RQGD"
     gene            12002..13132
                     /locus_tag="VNY79_02410"
     CDS             12002..13132
                     /locus_tag="VNY79_02410"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71332.1"
                     /translation="MFRSSLLGALLLVSISGTLAAQQPTEEQRAAIRSACRADFTANC
                     SGVEPGTKAALMCLVSNETKLSPACRTAVSAVAAQPAAPHHATPAAADAPPAGAPATP
                     APQPPPKAAAEGHAQDQLSAVRQACTLNDMLAHCSWIKPESPEILLCLKANAAELSPS
                     CRAAVGSGEPAPTPPAAQAQPAETAQPAETAPAASPPHGRPGVKRRVGAAPPSAPPPG
                     EAQNPSPEQISAVRAACRSDFRAHCRGVQPGGAEALQYLQQNGSQLSGPCRSAVAAIA
                     GGAPPAGSESAAPGATPPAADAQPGENAQPGDTAPPPRRRPGVKPRVGAAPSSAPPPS
                     EAQQPSPEQISAVRAACRSDFMAHCRGVQPWRRRSAAMSAAE"
     gene            13742..>13944
                     /locus_tag="VNY79_02415"
     CDS             13742..>13944
                     /locus_tag="VNY79_02415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71333.1"
                     /translation="MRKTWVEVCRQAVALERNDLRLKHVLARALTADGQREEAIGVWR
                     ELGEQNDADALFEIYDLYKSYYR"
BASE COUNT         2411 a         4660 c         4454 g         2419 t
ORIGIN      
        1 gaggcaggcg gcgacgtctc ttcggctgat tttttctagc tgcaaacggt ggagcggctt
       61 tgcgtgcctg agtaggtggc gcccgacgtc tttgtatggc tgcggcctaa gctcacggcg
      121 cttatgtgga agatactggc cggtgacgat ggccacgaag gtttcgtccg ccgtgcgctt
      181 ggcccgctcc ttctcgccgg ccgggtcgcg accgagacgc acctgagcgt ataggtcctt
      241 ggcggtcctg cacgccacac cgaagtccac ggccgccacc gagccgatac tgagccggcg
      301 ctgtttgctg cccagcttgt attggaagat gaatgagcag tggccgccgt cgcgcagccg
      361 aaccccgaag ccggggacgg tggtgtcgaa gacgatgtcg tcgctcttgc ccgccggcaa
      421 ttcgagccgg ccgatcaccg cggccgtcag cttcattttc atgggtatcc ccccggtctg
      481 ggaagcttct gggaagattt gggaagccct tccctgtcct ctcgtgtcca cggcgaactt
      541 gtggtctaga ccaggttatg cccgtattcc aaggggtatg tccactcctg tccacgtctg
      601 gggaaccatt agtcgatgat ggcggcataa accaattgct tgatgagctt gcggtagtag
      661 gcgcggctgg ggctcggcgc ctggctcatg tagacgccga cgagctcctc cttcgggtcg
      721 acccagaaat aggtgccggc gtagccggcc cacatgaatt cgccggccga tcccggcaca
      781 ccggcgacgc cgccgccctg gcgcacggca aagccgaggc cgaaggtgta gccgggcgtg
      841 ccgagcagca actcgccggg cgtcgtcggc gccgcgattc gcgtacccag gtgatccgag
      901 gtcatcagtg cgatggtcgg ccgcgacatg acccgcgcgc cgtcgagctg tccgccgttg
      961 agcagcatct gtgcgaaacg caagtagtcg atcgcggtcg agaccccgcc cgcgccgccg
     1021 gaatcgttct tcggctcctg ggcaacgtcg atcagcttgt tcggcaggcc gctcgcggca
     1081 tcggccgcaa gcggctgggc gaggcgtccc atcttcgccg tgggcaccca aaacgcggtg
     1141 tcctgcatct tcagcggctt gaacagccgc tcgtcgagga aatccgacag gcgcttgccc
     1201 gaagccgcct cgaccacgcg gccgagcaga tcgaccgcca tgctgtactc ccacaccgtg
     1261 ccaggctgat gcgcgagcgg cgccttggcc aggcgctccg cctcctccgc cggcgtgaga
     1321 tcgcgcgcgt cgtagtcgcg aacgccgggc aggtacagtc ccgccttcgc gtaggcctcc
     1381 ttgaccggag cattggcggt gatctcgccg taggcgaggc cggcggtgtg ccgcaataga
     1441 tcctgcacgg tcatctcgcg gtcggccggg accgtcgcat aggtcacgcg ggcgaattcg
     1501 ctgtcggcgc gcgccaggct gacctgctgg cccttgaacg caggcaggaa tttcgaaacc
     1561 gggtcggtga gctcgatctt gccgtcctcg accagcagca tggcggcgac cgagacgatc
     1621 ggcttggtca tcgaatagat gcggaagatg gaatcgagcg ccatcggctt gctttcttcc
     1681 ttgtcctgga agccggcagc gtcggcatag atgagcttgc ccttgcgggc gacgaccaca
     1741 accgtgccgg ctagcttgcc gtcgccgatc gcctggctca gcgccgcgtg gatccgatcg
     1801 agcttctcct tggaaactcc gacctgctcg ggctgcgcct gcggcagcgg cagattgacc
     1861 tgacaccagg ccgcgggcgc agcaacaaga aaagcgccga ccagcgctgc ggtaagcatc
     1921 cagcgtttca tttgcatggc ctccctatcg gctcgcgttc aaaaaccgct tggccgcaac
     1981 tcctaccaca accgggccgc gggtcgtaat cggcctcaac gagggcagcc ttcgaccctg
     2041 cttcgggctc gcttttcgcg tctgggcgcc gccgtgcacc acccttttcc tgcgacaccg
     2101 tgccgggctg gtgtaagatc ggacgcggca ttgcgcccgg cctcgagccg tcgtcgaagg
     2161 agccttgcta gcgcgcaggc cggcggcaac cgagggggcc gatcatgatc gatctcaaga
     2221 ccgaagatgg cattgcggtc gtcacgcttg cacacggcaa ggccagtgcg ctcgacatcg
     2281 aattgtgcga ggccctgacc agatgcttcg aggagcttcg cgctcccgaa atccgcgccg
     2341 tcgtgctcac tgggcagggc cgcatatttt ccgccggcgt cgatctcgtg cggttgagtt
     2401 cgggcgggac ggattatgtg cgcaagttcc tgccggtcat gaaccgggcg ttcgacgcgg
     2461 tattcttcct gccgaagccg cttgtggcgg cgctcaacgg ccatgccatt gccggcggct
     2521 gcgtgctcgc ctgctgcgcc gaccgcaggc tgatggcgcg cggaggcggg cgcatcgggg
     2581 tgaccgagct gctggtcggc gtgcccttcc ctgccctcgc cttcgagatc gtgcgtgccg
     2641 ccgttccgtc acgtcatttc gccgagttca cgttcggcgg cgcgacctac gaggccgacg
     2701 acgccttggc gcggggctgg gtcgacgaaa tcgttgaggc cgacgcgctg atggaaaatg
     2761 ccatggccgc cgcgcgccgg ctggcgtcgc tcccgacctt cgcctttgcc cagaccaaga
     2821 cgcaaatgcg ccagccggtg gtcgagcgtc tcgagcgcag cggcgccgcg atcgacaaga
     2881 tcgccaccga gatctgggcg gccgccgaaa cgctcgaccg cgtccgcgac tacgtcgcgc
     2941 gcacgctgaa gaagggctga cctattccgc tgccggtcgc ttgcgcgacc gctcgacggc
     3001 ggcgcgcacc agcgccagcc ggtcgttgcc gaagaacatg tcggtaccgc cgacaaacat
     3061 ggtcggtgag ccgaagccgc cccggcgcat cagctcttcg gtgttggcgc gcagcctgtc
     3121 cttgaccgcc tgctcaccca gtccggcgaa cagatacacg ggatcgaccc cggcgcggtc
     3181 ggcgacgcgc gcgagcacat cgtcctggga aatgtcctcg tcgtcgcccc aatacgcttc
     3241 gaacgccgct cgcgcgaagg cggtgagctt gccgtcggct tcgagcagca ggcagccgcg
     3301 catggccttg acgctgttga ccgggaagac gcgcggcgga aacacgatct tcagtccggc
     3361 ggcacgggcc cagtcggcga ggtccttgcg catataggcg gccttcgccg gcaccgggtt
     3421 ttcgcgcgac gcgtagacgc tgggattgac ggtgttgaat atgccgccga ccaggatcgg
     3481 acgccacgcg atcggaacgc cgagctcggc ggccatgggc tggatgttgt ggaaggcgag
     3541 atacgtccac gggctcgaac agtcgaagaa gaactcgatc atggccacac gccgcgatta
     3601 caccgaacgt tgcgcccggt ccttgtcgtt ctgtgccttg atcgccgcac gcgccgcctg
     3661 ccattgcgcg tcggtccaat ggcgcagctc gtagaaattg gagccagtgg cgtggctttg
     3721 cccaccgtcg agcgtgatcg tctgtccggt cagccactcg cagccgtcgg cgaggagaaa
     3781 cgtggcaagg ttctgcaact cctccatgcg accgacccgg cccatcgggt tgctgcgctc
     3841 ggcgcgctcg ctcggcgagg cgccggggtt tagacgcttg ctcgcgcctt cggtcggaat
     3901 gacgccgggc gcaatggcat tgaggcggat gccgtaatgc gcccactcgg tggcgagcga
     3961 catggtcatg gcgtgaacac cggacttgct catcaccgac ggcacgacat acgggctgcc
     4021 gttgtagacc caggtcacga cgatcgacac gacgttgccg cgatgcccgc cggcgatcca
     4081 gcggcgaccg accgcatggg tgacgtagaa ggtcccgtgc agcacgatgt tggcgacggc
     4141 gtcgaacccg cgcgtgctca gatcctcggt gcgcgagatg aagttgccgg cggcgttgtt
     4201 gacgaggtcg gtgagcggac cggactggaa gatgtcagcc accatggcgt cgaccgcgcc
     4261 cgcatcgcga atgtcgacgc cgtaggactt gacccggccg tcatatttcc cggtgagttc
     4321 ggccgccgtg gcgtcgcaca ccgccttgcg ccgtccgcag atgaagatat cggcgccgag
     4381 cgccaggaat ttttccacca tgcccctgcc gaggccggtg ccgccgccgg tcaccaggat
     4441 gcgccgaccg cgaagaagtc cgtccttgaa catctgcccc ctctccgctt ttccggcact
     4501 ctatcacggc gcggaccgac ccctgatccc gttgggcaag ttgggactga tagcggaggt
     4561 tgcggcccca tggccgcttc aggcctgggt tacgatgttc gcatgcctcc catgcaaaaa
     4621 tgctcgacac ccactcaatt ctaggcaaaa tcgcgcaacg cggctctcgc cttgggggaa
     4681 ttccccctgg gcgcacaaca gacccggccg aaaacacgac agtcggccga cgcggggtca
     4741 ccagggagga gaaagacgac atgaccaagg gacattcatg ggcaggaatc gcggcgtcgc
     4801 tggccgcact cgcatggttg ggcctgccca ccacggcgct ggcgcaagag gagagcggca
     4861 ccaagaccgc gcatgaactg cgcgccgact acgacaagga cttaaagggc aagaccatcg
     4921 ccttcctgcc gatcgccacc ggcgtgccgc tgatggacga gtggggacgc gtgatcaaga
     4981 ccgaggccga atggcgcggc atgaagttca tcatccgcga tcccgcgctc aacatgtcgg
     5041 cgatgcagca ggcgctcacc gcgcttgtcg atcaaaagcc cgacgtgctt atcgttcaga
     5101 atccgagcgt cacgctgctg atgaaggagc ttaagcgcgc ggagtcgcaa ggcattcacg
     5161 tcatccagat gaacatgtcg tcgaactaca agtcggacgc ctttgtcggt gccgactggt
     5221 acgaggtcgg acgcatcctc gccgaggacg tggtcaaggt ttgcggaacc ggaagcggca
     5281 cgtccggcga ggtgcagatc gtccagggcg agcttgccgc ggctgccagc gtcgatcaga
     5341 tcgcaggcgt catggatacg ctgaaaaagg attcggcagt caaggtcgtc tccaaccagg
     5401 cggcgaactg ggatgccaac aacgcgctca acatcaccgc gacggtgatc cagcagcacc
     5461 cgaacctctg cgccagcatc ggtttctggg gcatcatgca gtccggcgcg gcccaggcga
     5521 tccgcaacgc cggcaagatc gagcaggtga aggtctacgc ctccggcgaa ggctcgcaac
     5581 tcgattgcga ccaggtcgcg caggggaact tccataagtt cctcagctat accgcgaccg
     5641 aacaaggtca cgacgcattc ctcgcggcag aggccttgct cgaaggcggc acgaagccgg
     5701 gaacgacgca caaggagttc tacacgcgtc cgatctggct ggataagacc aacgccagcg
     5761 gcgccaattg ctacccggtg cccaagccgc cgacctcgac cgcatcgaac taacaaagag
     5821 acgaccgccg tcgcatgaga ccgccgctcc cgccgtcacg gcgggagcgg atcgtggcgt
     5881 ggagtggagg ccgatgtcga ctactgcgtt gcaggcgccg agccgacggg cgccgcggct
     5941 tggacattcg ttctcgccgc ggctgttcct gtccgaattg ctgctcaagc aatggttcga
     6001 gccggtcatc ccgttcacgg tgatggtcgc gctcgcggtc tatttctcgc tcaccatccc
     6061 ggattacggg acgctcacca acgcattgtc gctgatgcgg ctgttcgccg agttcggttt
     6121 cgtcgcgctc ggcatggcgc tcagcctcat ttccggcggc atcgatctga gcgtcggcgc
     6181 gatctttgcc ttctgcaatt tcactgcgct gttctgcctg ttcgtccttg gcctgccggt
     6241 cgggctcgcg atcgtcgcga cgcttttgac cggcgccgtc atcggcgcat gcaacggcat
     6301 tctgatcggc tatctcaagg cgcggccctt tctgaccaca ctggtgacgc tgatcatcgt
     6361 gcgcgcgggc gttaacctgc ttaacgagcg ctatgccacc gtcttcgcca ccaattcgat
     6421 cgaaagcgac gcctgggatt acctcggcga aggcagcgtt cttggcatcc cgatcaacgc
     6481 ggcaacgctg atcgtcgttc tgctcatcgg ccacgtcttt ctcagccggt cgcgctacgg
     6541 atggcatctg accgcgatcg gcgcgagccg caaggcggcc cgtcatgccg gcattcgtgt
     6601 cgagcgcatg ctgctcgcga cctacgtcct gtcgggcacg ctttgcgcag cgagcggcat
     6661 cttttacgcg gcccggcaag gcagcacgga ttcgacgacc ggcgtcggct gggagttcca
     6721 ggcgctgacc gcggtgatta tcggcggcgc ctcggttctc ggcggccgcg gcacggtatg
     6781 gcgggcgttg ctcggcgcca tcatcatttt catgatgacc aacgggctcg tgcgcatcgg
     6841 catccccggt tacatcacct cgtcgctcac cggcattatt ttgctcgtcg ccatcggctt
     6901 tgacgtgaaa tgggcaaaga accgcggcaa ggtcattcag aagatttacg tcaatcccgc
     6961 cgtgctttcg ctctcgccgg cgccatcgat cgaacgcggc agcaaatctc cctacgccca
     7021 aaatgaccgg ctggttggcg cagaggccat cggactcgat caggtcgaag gcccggaaga
     7081 cgtgatcctc gaccggcaag accggctcta cggcagcacc cgcgacggca acatcatccg
     7141 tttttccggc ccgaacttcg aaaagcggga agtgttcgcc catatcggcg ggcgccctta
     7201 cgggatgcag ttcgacaagg acgagaattt gatcgtctgt gtcggcggca tgggcgtgta
     7261 cggcgtgagg ccgagcggag aggtgttcaa ggtcaccgac gagaccagcc gcacctggac
     7321 caagctcaac gacgattcgc gcgtgcgcat ggcggacgac ctcgatatcg cgcccgatgg
     7381 aaaaatctac ttcagcgact gcaccacccg ttacgaggcg gcgacctatc cgctcgaagt
     7441 ggtagagggc cgtccgaacg gccgcgtact gtgccacgat cccgcaaccg gcaagacgca
     7501 caagctgatc aagagcttct acttcccgaa cgggatgtgc gtcgctcatg acggccgctc
     7561 ggtgctgatc gcgtcgacca ccgcctgccg catctaccgc tactggcttg caggcccgaa
     7621 tgccggcacc accgaaatcc tgatcgacga aatacccggc catcccgaca acatcaatcg
     7681 cgcctccgac ggcaattatt ggctggctct agtcggcgtc cgcacgccga gcttcgacct
     7741 ttccatggaa aaggcggcgt tccgccgccg catggccaag caggtcccaa ccgacgagtg
     7801 gctcgggccg aacctgaact acggtagcgt cgtcaagttc gacgaagccg gcaacgtcct
     7861 ggagtcctat tgggatccga ccggcatctc gcatgcgacc ctgacctcga tgcgagagca
     7921 caaaggcgac ctctacctcg gcgggctgga gaacaaccgc atcgggcgca tcaagctcga
     7981 tccggcgcat tgcgatccga cctggacggg ctacgaggcc tattggggca acaagcggcg
     8041 agtgtgatgc gatgagcttt ctcacgtacc tgcgccgcga cctcgaacag atatttttca
     8101 aagatcgcga cccgcacgca attccgtcga tggacggcgc gttcagtccg aatgatcggc
     8161 tcgaacaggc gacgacgatc ggcgagccgc ttcccggcgc cgatgcggtc gccgaagccc
     8221 cggatggcgc catctgcgtt tccgccgcaa acaaagtgtg gcggctcagc ggcacgggct
     8281 accgggatcg cgccgtattc gcggaattcg acggcgacgt cggtgccctc gccttccatc
     8341 ccgacggccg cttgcttgcg tgcaccgagc gcggcctcgt cgccatggac gcggccggcc
     8401 gcagaagcgt cctcgccgaa gccgatggcg aagcgctgca atgcctcacg gcggtggccg
     8461 tcgccgccga cggcaccatc tttgtcagcg acggcagcac gctccatccc gccgccgact
     8521 ggtgcgtcga tttgatggag cataacgcgc gcggccgtat cgcgtgttgc cggcccgcgc
     8581 tcgacaatgc gcgcgttttg ctgagcgggc tgaactaccc gggcggcctc gtggtcgcgc
     8641 ccgacggcca tctctggttc acggaaagct tcggccattg cctccggcgc gcgcgcattg
     8701 cagcgcccgg tgtcatcggc gccccggaaa tggtgatccg caacatgccg ggctatccgt
     8761 cgcggctggc aagagccgcc ggcggcggct tctggcttag ccttttcggc gtgcgcacgc
     8821 acctcgtgga gttcgtcctg cgcgaggacg atttccgcaa cgagatgatg cggactgttc
     8881 cgccggccta ttggattgcg ccgatcattt ccagcacccg cgactgcctc gaacctctgc
     8941 aactcggcgg gctcagggcg ctcggcattg agaaaccgtg ggcgccgccg cgctcatacg
     9001 ggctgctggc gcggctcgac gccgacggcg aggttgttga gaccttgcac agccgcgtcg
     9061 gcggaaaaaa tcacggcatc acatccgtca tcgaaaccgc gctgggcgtt gtcatcgtgt
     9121 caaaaggcag cggccgcgtg ctgctgcacc aatcgggtat gcgccaatga atgagatggc
     9181 cgtcatcgat cgttccgcgg agaaggtgtt gccgcaatgc gcgcgcgaac cggtcttgag
     9241 cgtcagcaag ggcagcaaga tctacggcgg cgtgcacgcc atcgagggcg tggatttcga
     9301 cctctaccca ggtgaagtgc acgccctcgt cggtgagaat ggcgccggca agtcgacgct
     9361 gtgcaaggcg attgccggcg cgatccggct cacctcgggc acttactgcg ttgacgggaa
     9421 gccggtcgac ttccagtcac cgcgcgacgc gctcgccgcc ggtatctgca tggtctatca
     9481 ggaaacgagc ctggtgccga cgatgacggc cgcgcagaac atcgaactcg gcaacgagaa
     9541 gctgctcaca cgctttcgca cgctgaacat ccaggcgcag cagctcctgc aatcgctcaa
     9601 tttccacgtc gacccggcga tcccggtcgc gctcctcggc accgccaagc ggcaaatggt
     9661 ggagatcgcg cgcgccatct acaacaaggc ccgcatcatc atcttcgacg agccgaccgc
     9721 aagcctcacg cccgaggaga tcgtgcattt cttcaacctg gtgcgcgacc tgcgcgcccg
     9781 cggcgtcgcc gtcatctaca tctcgcacgc gctcgaggaa tcgctgaaga tctccgaccg
     9841 catcaccgtg ctgcgcgacg gcaagctggt gatcaccgcc aagacctcgg agatgacccg
     9901 cgagaagctg gtgcggcaca tggtcggccg cgacatcacc cagacccatt acgcccgcca
     9961 gcgcgacggc agccgaaggc atcactcgac cgagaaggtg ctggccgtcg agaacgtcac
    10021 catgggcctc atagtcaaga acatgtcgtt ctcggtctat gccggcgagg tggtcggcat
    10081 cgccggcctc atcggctcgg ggcgcaccga gatcgccaag atcgtctacg gcgcattgaa
    10141 gcgcaacctt atcaacggcg gcatgatcta cctgcgcggc aagccgatcc gctaccgcgt
    10201 gccgaagcag gcgatcaatg acggcatctg ctacatcacc gaggaccgca aggccaacgg
    10261 ctacttcgag accatgcgca tcgacgacaa cctctatgtg agcaagcttg cgaccaaggc
    10321 cggctggagc tttctggtat cgcggttcgt gcgcaacaag ctggcgagct actggatcga
    10381 gcggctcaag atcgccgcgc tgctgcgcaa ggcgcgcatc gtcgagctct ccggcggcaa
    10441 tcagcagaag gtcgtgatcg ccaaatcgct ggcgcaggat ccctcgatcg tcatcttcga
    10501 cgagccgacc cgcggcgtcg atgtcggcac cattcccgag atccacgccc agatccgccg
    10561 cctcgccgac gaaggcaagg ccatcgtggt catctcctcc tatctgccgg agatcctcgc
    10621 cgtctccgac cgcatcctgg tcgctcgcct tggccgcatc gttgctgaat tcgatggagc
    10681 gacggccacc gaagacaaga tcatgtacgc cgccatccac tgatcgcatt gccccaaagg
    10741 aacgtcttat ggcatccgtc acgaccaccg catccggcaa gacgacgcct tggtggcgca
    10801 gcctcaacaa gttgagccag gaacaggtcg tcgccgcaat cgtcgttgtt ttgctcattg
    10861 tctttgcact ggcgcttcct ggctttgcga cgacgcggaa tatcctcggc ctggtccgca
    10921 gcatctccat tctcggcatc ctcggtctcg gcatggggct gatcgtcatc agccgcagca
    10981 tcgacctgag cgaaattgcg ctgatggcct gcccgtgggg cgtggcgctc atcgccaatc
    11041 agcatggact tccgccgttc tggacagcgg tcctcgcgct cgtcatcgcc gtcgccgtcg
    11101 gctgcatcaa cggtttcatg gtcgcgtttg tcgaggcgcc ggcgctgttc gtcaccctgg
    11161 cgacgacgct cgttgtctac ggcgcatcgt actggatctc gccggtctac gtcgtctatg
    11221 cgccgcagga cgcggatgcg ctgttattcg cgggccgcgg ttcgctgttc ggcataccga
    11281 tgccgatcat cgtgtttgcg gctgcggcgg tggtcatgca cttcttcctg tcacggacct
    11341 cgacgggccg cttcatctat gcccagggcg acaatcccga agccgcgaag ctttcgggca
    11401 tcgcgctgcg accactgaca atactggagc atgtgctggt tgccttgttc gcctggctcg
    11461 cggggctcgt ctggatcggt cagaccggca atatgcagac gaacatcgtg atcgttggca
    11521 cgcaaatctt cgatgtcatc ctcgtcgtcg tactgggcgg catcagcctc gtcggcggac
    11581 gcggcggcgt gttcagcgtc atcgtcggct gcgcgctgat cggcacgctg ctcaacgcct
    11641 tcaccatcat ggacgtgaat accgaggtgc agaacatcat ccgcggcgtg gtgctgctgc
    11701 ttgcgatcat cgtcgacaac tggctgcatc cgcgcgacga agagaccgcg cgccagggcg
    11761 actgatcgtc ggatggggcg aaccgccgct tcgcatcggt cactaaaggg cgccgaagcg
    11821 tccgcgcgaa gcggcggggc gacgctaccg tgcagcgaat gcgtccgtgc cgaaccgcgt
    11881 gagtaaatcg cgcagtaagc cactcgccac ggcacggcaa tgccgccctg gacgcaagcg
    11941 gcccctgcgt gcattgtttc ggccgcactg ctacggtggc caacgtcgtg aggatttttc
    12001 catgttcaga tcgtcgctgc tcggagcttt gcttctcgtc agcatttccg gaacgctcgc
    12061 ggcacagcaa ccgaccgagg aacagcgcgc cgccatccgc tcggcctgcc gcgccgactt
    12121 caccgcgaat tgctccggcg tggagcccgg caccaaggcc gccttgatgt gcctggtcag
    12181 caacgagacg aagctgtcgc cggcctgccg gacagcggtc agcgctgttg ccgcgcagcc
    12241 ggccgcgccc caccacgcga caccggcggc agccgatgcc ccgccggcgg gtgcgccagc
    12301 gactcctgcg ccgcagccgc caccgaaggc cgctgcggaa ggacacgcgc aagatcagct
    12361 cagcgcagtg cggcaggcct gcacgctgaa cgacatgctc gcgcactgtt cgtggatcaa
    12421 gcccgagagc ccggagatcc tgctttgcct gaaggcgaat gccgccgagt tgtcgccgtc
    12481 gtgccgcgca gcggtcggat ctggcgagcc ggcgcccacg ccgccggcag cgcaagcgca
    12541 gccggctgaa accgcacagc ccgcagagac tgcgcccgcc gcgtctcccc cgcatggacg
    12601 accgggtgtc aaacggcgcg tgggcgcggc gcccccgtcg gccccgcctc caggcgaagc
    12661 gcaaaatccc agtcccgagc agatcagcgc cgtccgcgcc gcatgccgat cggatttcag
    12721 ggcgcattgt cggggcgtgc agcccggagg cgccgaagcg ctgcaatatc tgcagcagaa
    12781 tggctcgcag ctctcgggac catgccgcag cgccgtcgcg gcgattgctg gcggcgctcc
    12841 tcctgccgga agcgaatcgg cggcgcccgg agccacgccg ccggcagcgg atgcgcaacc
    12901 gggtgaaaac gcgcagcccg gcgatacggc gcctcccccg cgcagacgac cgggcgtcaa
    12961 gccgcgcgtc ggcgcagcgc cttcgtcggc cccgccgccg agcgaagcgc aacagccaag
    13021 tcccgagcag atcagcgccg tccgcgccgc atgccgatcc gatttcatgg cgcactgccg
    13081 gggcgtgcag ccctggaggc gccgaagcgc tgcaatgtct gcagcggaat agctcccagc
    13141 tctcggggtc gtgccgcagc gccgtcgcgg cgatcggtac cggcgctcct ccttccggaa
    13201 gcgaagcagc ggcgcccgca accgcgccgc cgggcggacc cggacccgcg gtcggtccgg
    13261 ccccgccacc tgggccgatg ccgacgctgc gcccgggcga ggcattctac gtcctgcgca
    13321 tctgcggccc ggataagcgc cgactgtgtg gtgacgttcc gccgggcgga ggccggatca
    13381 tcgcttgcct cgccgagaac gcctcgaacc tgtcgcccga ttgtgccgcg gcgctcgccg
    13441 ccgcacgcag gtaacatcga gatcgctttg cgaaagcctg cgacaccggt gatagcccac
    13501 gtttcgacgc tcgcgtcacg gcgtcatctt gcggtctggg aaaggaatga gccggtcccg
    13561 tcttgtccga caacgttgcc gcgtcgcgcg gcggtttgtt gttttgttgt gtctcggggc
    13621 ggcggcgatg gcgacgaacc cgccgtgcgc tgcggagact ccggcgcaaa gcggccccgc
    13681 gcgcgaatgc ctccgcctga atgacgctgc cttcgacggg gactgggacg aacaggcgcg
    13741 catgcgcaag acctgggtcg aggtctgccg ccaggcggtg gcgctcgaac gcaatgattt
    13801 gcggctcaaa cacgtgctgg cgcgcgcgct gaccgccgac gggcaacgcg aggaagcgat
    13861 cggggtatgg cgtgagctgg gcgaacagaa cgacgcggac gcgctgttcg aaatctacga
    13921 cctgtacaaa tcctattacc gcag
//
LOCUS       DATMQB010000071         5181 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_949907, whole genome shotgun sequence.
ACCESSION   DATMQB010000071 DATMQB010000000
VERSION     DATMQB010000071.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5181)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5181)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5181
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_949907"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            38..1258
                     /locus_tag="VNY79_02420"
     CDS             38..1258
                     /locus_tag="VNY79_02420"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008173 - RNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009451 - RNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TrmJ/YjtD family RNA methyltransferase"
                     /protein_id="HWX71334.1"
                     /translation="MPGAGTDKTKRWAAAAAPVVVLVEPQLGENIGAAARAMANFGLS
                     RLRLVAPRQSWPNAKARIMAAGADRILDDAAIYDSLEAAIADCTFVVAATARAHDQAK
                     QVVGAAEAAALLAPRVDAGETVAIVFGRERNGLENDEVALADRILTLPVNPAFASLNL
                     AQAVAIVAYEWFKLAAGGRLPFAMPEKSAPAPKQQLLAFFASLERELEKVEFFRPPDK
                     RETMQINLRNIFSRMQPTRQDIQTLHGVVMAIAEGRKGPARGGVLDGEEAEMLRALLA
                     EHGGGRVPSERGPVRGLARLLRRNPTEAERTLWQALVNDRRFAGRGFKRQTPVGPHIC
                     DFVSFPLKVVLDVVPSAEEETAAAARQQKRAWLVARGYRVIEMPAGDVEADVGVALDR
                     LAEGLGTAGVVAKR"
     gene            complement(1302..2081)
                     /locus_tag="VNY79_02425"
     CDS             complement(1302..2081)
                     /locus_tag="VNY79_02425"
                     /inference="COORDINATES: protein motif:HMM:NF015297.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase/citrate lyase family protein"
                     /protein_id="HWX71335.1"
                     /translation="MALPGFSFARRLRAGETVFCGWCSMPYPIVAETIGRDGFVAVTL
                     ESQHGLWDMGAMLTGIAAVRQSGAAPLVRVPVGDFVMVSRVLDYGAEGVIAPMINTAA
                     DARAFVAAAKYPPIGERSWGPHRVTTLAGIADQSMYLREANDNIITLAMIETTAALTN
                     LEAILATPGIDGVFVGPADLSIALTGGKSLDPVSPEVDREIDRIIAAAQKVGKTSGVF
                     CHSPERAVALAKRGARFLAVMSDLTLLRSGIATAMKVLKAG"
     gene            complement(2098..2421)
                     /locus_tag="VNY79_02430"
     CDS             complement(2098..2421)
                     /locus_tag="VNY79_02430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1476 domain-containing protein"
                     /protein_id="HWX71336.1"
                     /translation="MTTFDKREEGFEKQFAHDEELKFKATARRNKLLGLWAAEKLGLS
                     GAEAEDYAKSVVRADFEEAGDHDVLHKIRRDFDAKGVAQSDHQISRTMTEFLAKAVAD
                     IKAGR"
     gene            2696..3463
                     /gene="purC"
                     /locus_tag="VNY79_02435"
     CDS             2696..3463
                     /gene="purC"
                     /locus_tag="VNY79_02435"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004639 -
                     phosphoribosylaminoimidazolesuccinocarboxamide synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HWX71337.1"
                     /translation="MSRRRRIYEGKAKVLYEGPEPGTLIQHFKDDATAFNAKKHEVIE
                     GKGVLNNRISEYVFQHLNDIGVPTHFIRRLNMREQLIREVEIIPLEIVVRNVAAGSLS
                     QRLGIEEGTQLPRSIIEFYYKNDQLNDPMVSEEHVTAFGWATPQEIDDIMSLAIRVND
                     FLSGLFLGVGIRLVDFKMETGRLWENDLMRIVVADEISPDSCRLWDIKSNEKLDKDRF
                     RRDLGGLLEAYTEVAKRLGIMSEGERPQGAGPILVKG"
     gene            3543..4121
                     /locus_tag="VNY79_02440"
     CDS             3543..4121
                     /locus_tag="VNY79_02440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016917906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0004519 - endonuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Uma2 family endonuclease"
                     /protein_id="HWX71338.1"
                     /translation="MGVPTIKTGPMTVEEYFAFTETQPDNEKWELIDGEPILNASPSR
                     SHQTIFWNLALLIGTIQRQRPQSWEASPGVGVRVSDTSLPEPDIFIVPAGSARRDPYR
                     RETSDVLVAFEILSPSTAERDLRWKRTAYTSLPSLTHYVVIAQDAVDIVVFARAAGFA
                     ERHLRSLADTLELPALGISLPLAEIYRDTDLR"
     gene            4235..4477
                     /gene="purS"
                     /locus_tag="VNY79_02445"
     CDS             4235..4477
                     /gene="purS"
                     /locus_tag="VNY79_02445"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HWX71339.1"
                     /translation="MKARVTVTLKSGILDPQGKAIEGALRSLGIRGVASVRQGKVFDI
                     EIEGADRAGAEAALKNAAEKLLANTVIENYRVEVTG"
     gene            4513..>5181
                     /locus_tag="VNY79_02450"
     CDS             4513..>5181
                     /locus_tag="VNY79_02450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX71340.1"
                     /translation="MNARLAAPVVAVFALLGGGAAAQEGPVKIGVLTDMNSLYADIVG
                     EGSVVGARLAAEDAGPVLGQPVQVIVGDHQNKADIGSTIVRQWYDTGGVDMVADGGSS
                     AVALAVEEVSREKHKLVLFNGPATSDITGPRCSPYAAHWTYDTYSLAHVTGSAIVKSG
                     GRSWFFVGADYAFGHALQRDTAAVVEQSGGKVLGTVYHPINTADFSSFLLQAQASKAQ
                     IIGLA"
BASE COUNT          868 a         1733 c         1709 g          871 t
ORIGIN      
        1 ctcgacggga tcggcgccgc ggtgcattag aacaaccatg ccgggcgcag gaaccgacaa
       61 gaccaaacgc tgggcggcgg ccgccgcacc ggtggtcgtt ctggtcgagc cgcagctcgg
      121 cgagaatatt ggcgccgccg cacgcgcgat ggcgaatttc ggcttgtcgc ggttgcgcct
      181 cgtggcgccg cggcagtcct ggccaaacgc caaggcgcgg ataatggcgg cgggcgccga
      241 ccgcatcctc gacgatgccg caatttacga cagcctcgaa gccgcgatcg ccgactgtac
      301 tttcgttgtc gcggcaaccg cgcgcgcgca cgatcaggcg aagcaggtcg tcggagcggc
      361 ggaggcggcg gcgttgctgg cgccgcgggt cgatgccggc gagaccgttg ccatcgtctt
      421 cggccgcgag cgcaacgggc tcgagaacga cgaggtcgcg ctcgccgacc gcatactcac
      481 gctgccggtc aatccggcgt tcgcctcgct caatctggcg caggcggtgg cgatcgtcgc
      541 ttacgagtgg ttcaagctgg cggccggcgg caggctgccg ttcgccatgc cggagaaatc
      601 cgcgcccgcg ccgaagcagc agcttctcgc cttctttgcc tcgctcgagc gcgagctgga
      661 gaaggtcgag ttcttccgcc cgcccgacaa gcgcgagacg atgcagatca atctgcgcaa
      721 cattttttcc cgcatgcagc cgacccggca ggacatccag acgctgcacg gcgtggtcat
      781 ggcgatcgcg gaggggcgca agggcccggc gcgcggcggc gtcctcgacg gcgaggaagc
      841 ggagatgctg cgcgcgctcc tggccgagca tggcggcggc cgcgtgccct cggagcgcgg
      901 cccggtgcgc gggctggcgc ggctgctgcg ccgcaacccg accgaagccg agcgcaccct
      961 gtggcaggcg ctggtgaacg atcgccgctt cgccggccgc ggattcaaac ggcagacgcc
     1021 ggtcggtccg cacatctgcg atttcgtctc cttcccgctc aaggtggtgc tcgacgtggt
     1081 gccgagcgcg gaggaggaaa ccgctgccgc ggcgcgccag cagaaacgcg cctggctggt
     1141 cgcgcgcggc taccgcgtga tcgagatgcc ggcgggcgac gtcgaggcgg acgttggtgt
     1201 ggcgctcgat cgcctggcgg aaggactggg cacggccggc gtggtcgcga aacggtagac
     1261 gatccgtcga cgcgccaacg gaagcgcgcg tcagggcgca actagccggc cttgagcacc
     1321 ttcatggcgg tcgcgatccc cgatcgcagc aatgtgagat cgctcatcac cgcgaggaag
     1381 cgtgcgccgc gcttggccag cgccaccgcg cgttcgggcg aatggcaaaa gacgccggag
     1441 gtttttccga ccttctgcgc cgccgcgatg atgcggtcga tttcgcggtc gacctccggc
     1501 gacaccgggt caaggctctt gccgccggtg agcgcgatcg agagatcggc cggaccgacg
     1561 aagacgccgt cgatgccggg agtcgccagg atcgcttcga ggttggtaag cgcggcggtg
     1621 gtctcgatca tcgccagcgt gatgatgttg tcgttcgcct cgcgcagata catcgattgg
     1681 tcggcgatgc cggcgagcgt cgtcacccgg tgcggtcccc agctgcgctc gccaatcggc
     1741 gggtatttcg ccgccgcgac gaaggcgcgc gcatcggcgg cggtgttgat catcggcgcg
     1801 atgacgcctt cggcgccgta gtcgagcacg cgcgagacca tcacgaagtc gccgaccgga
     1861 acgcgcacca gcggcgccgc gccgctttgg cgcaccgccg cgatgccggt gagcattgcg
     1921 cccatgtccc acaggccatg ctggctttcg agcgtgaccg ccacaaaacc gtcgcggccg
     1981 atcgtctcgg cgacgatggg atagggcatg ctgcaccagc cgcagaacac ggtttctccc
     2041 gcgcgcagac ggcgggcaaa gctgaagccg ggaagggcca tgatgtcggc tcccgcccta
     2101 ccgacctgct ttgatgtcgg cgaccgcctt cgctaggaac tcggtcatgg tgcggctgat
     2161 ctgatggtca gattgcgcga cgcccttggc gtcgaagtcg cggcggatct tgtgcaacac
     2221 atcgtgatcg cccgcctcct cgaaatcggc cctcaccacc gatttcgcgt agtcctccgc
     2281 ctcggcgccg ctgaggccga gtttttccgc cgcccacagg ccgaggagct tgttgcgccg
     2341 cgcggtcgcc ttgaacttga gctcctcatc gtgggcgaat tgcttctcga agccttcctc
     2401 gcgcttgtcg aacgtggtca tgcctctcgt cctgagttgc gtggaacctt gcaacgcgcc
     2461 tgccgccttg catatcgggc atgcgccgtc aaggcaaccg cgatgcttcc acacatcgcc
     2521 gttgcggcgc gcggggcgcg ggtctatgtc gattgtactc cgcttcgcgt tcagctagcc
     2581 ttcccgttgc ggaggggctg cgttgagtcg ccgccccttg ccgccgccgc ggatctcgat
     2641 agcagaactg gagccacggc atcccatgga tttcaccaag ccacggtaca ctccgatgag
     2701 ccgccgtcgc cgcatctatg agggcaaggc gaaagtcctt tatgaaggac ccgagccggg
     2761 aacattgatc cagcatttca aggacgacgc gaccgccttc aatgcaaaga agcatgaggt
     2821 gatcgagggc aagggcgtcc tcaacaaccg catctccgag tacgtgtttc agcacttgaa
     2881 cgacatcggg gttccgaccc acttcatccg ccggctcaac atgcgcgagc agctcatccg
     2941 cgaggtcgag atcattccgc tcgaaatcgt ggtgcgcaac gtcgccgccg gttcgctgtc
     3001 gcagcggctc ggcatcgagg aaggcacgca gctgccgcgc tcgatcatcg agttctacta
     3061 caagaacgac cagctcaacg atccgatggt gtcggaggaa cacgtcaccg ccttcggctg
     3121 ggcgacgccg caggagatcg acgacatcat gtcgctcgcg atccgcgtca acgacttcct
     3181 ctccgggctg ttcctcggcg tcggcatccg gctcgtcgat ttcaagatgg agaccggccg
     3241 gttgtgggag aacgacttga tgcgcatcgt cgtcgccgac gagatctcgc cggattcctg
     3301 ccggctctgg gacatcaagt cgaacgagaa gctcgacaag gaccgcttcc gccgcgacct
     3361 cggcgggctc cttgaagcct acaccgaggt cgccaagcgc ctcggcatca tgagcgaagg
     3421 cgagcgcccg cagggcgccg gcccgatcct ggtcaagggc tagtctggag catggtccgc
     3481 gaaagcggcc gccgtattgc gccaaggatc gtgctcgcag gcgcaatcta ggagcgcgtc
     3541 ccgtgggcgt cccgacgatc aaaaccggtc cgatgacggt ggaggagtat ttcgccttca
     3601 ccgagacgca gcccgacaat gagaagtggg agttgatcga cggggagccg atcttgaacg
     3661 cctcgcccag cagatcgcat cagacgattt tttggaatct tgctcttctc attggaacga
     3721 tccagcgcca gcgtccacaa tcgtgggaag cgagcccggg cgttggcgtg agggtatccg
     3781 atacaagcct gcctgagccc gacattttca tcgttccggc cgggtcggcg cggcgcgacc
     3841 cctatcgccg ggaaaccagc gacgtcctcg tcgcgttcga aatcctctcg ccttcgacgg
     3901 cggagcgcga tctgcgctgg aagcgcacgg cctataccag cctgccctcg ctcacgcact
     3961 acgtggtgat cgcccaggac gcggtcgata tcgtggtgtt cgcgcgcgcc gccggattcg
     4021 cggagcggca cctgcgctca ctcgccgata cgctcgaact gccggcgctg ggcatttcgc
     4081 tgccgctggc ggagatttat cgcgacaccg atttgcgata gtgattgaac ggcgcccgtg
     4141 gcgtccgcat cgtcgcggcc atggcggcgc ctccgtaccg gcaggcaacg ctggagcgct
     4201 ttgcccatga aagcttgccc atgaaagctt gcccatgaaa gcccgcgtca ccgtcacgct
     4261 gaaatccggc atcctcgacc cgcagggcaa ggccatcgaa ggcgcgctgc gttcgctcgg
     4321 catccgcggc gtcgccagcg tgcgccaggg caaggttttt gacatcgaga tcgagggcgc
     4381 cgaccgcgcc ggcgccgaag cggcgctcaa gaacgcggcg gagaaactcc ttgccaatac
     4441 cgtgatcgaa aactaccgcg tcgaggtgac gggataggac gcgactgcat aaggacccca
     4501 gggaggacta tcatgaacgc caggctcgca gcccctgttg tcgccgtttt cgcgctgctc
     4561 ggcggcggcg ccgccgccca ggaggggccg gtcaagatcg gcgtcctcac cgacatgaat
     4621 tccctttacg ccgacatcgt cggcgaaggt tccgtcgtcg gcgcgcgctt ggctgccgag
     4681 gatgccgggc cggtcctcgg ccagcccgtg caggtcatcg tcggcgatca tcagaacaag
     4741 gcggacatcg gctcgaccat cgtgcggcag tggtacgaca ccggcggcgt cgacatggtc
     4801 gccgacggcg gctcctcggc ggtggcgctg gcagtcgagg aggtctcgcg cgagaagcac
     4861 aagctcgtgc tgttcaacgg tcccgccacc tcggacatta ccggcccgcg ctgctcgccc
     4921 tacgccgcgc actggaccta cgacacctat tcgctcgccc acgtcaccgg ctcggcgatc
     4981 gtcaaatccg gcggccgaag ctggttcttc gtcggcgccg actacgcctt cgggcacgct
     5041 ctccagcgcg acaccgcggc cgtggtcgag cagtccggcg gcaaggtgct gggcaccgtc
     5101 tatcacccca tcaacacggc agatttttcc tcgttcctgc tgcaggcgca ggcctccaag
     5161 gcgcagatca tcggcctcgc c
//
LOCUS       DATMQB010000072         2024 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4359413, whole genome shotgun sequence.
ACCESSION   DATMQB010000072 DATMQB010000000
VERSION     DATMQB010000072.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2024)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2024)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2024
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4359413"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..735)
                     /locus_tag="VNY79_02455"
     CDS             complement(<1..735)
                     /locus_tag="VNY79_02455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HWX71341.1"
                     /translation="MARLRPTIFALSSGRPPAAIAVVRVCGPQARAALQKLIGRVPPP
                     RQAALARVRDPENGDVIDEALALWFPAPHSETGEDMAELQIHGGHAVVAAVLDALGRI
                     EGCRPAEAGEFTRRAFENGRLDLTAVEGLADLIAAETPAQRRQAFRQLKGLIGDRAEA
                     WRRTLIEALALVEARIDFADEGDVPEDLVGPALASVTRLRDEIAAALADGRRGERLRD
                     GIVIAIAGPPNAGKSTLLNRLARREAA"
     gene            complement(786..>2024)
                     /locus_tag="VNY79_02460"
     CDS             complement(786..>2024)
                     /locus_tag="VNY79_02460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018428609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008452 - RNA ligase activity [Evidence
                     IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RtcB family protein"
                     /protein_id="HWX71342.1"
                     /translation="GALAHRLNIAPEDADEIANVAAVEQHMTELMRVPTVRAGAVMPD
                     ACPAGSAPGTIPVGGVVAAENAIHPGMHSADICCSLAVSIFRDLAPKAALDAAMRLSH
                     FGGGGRPRGEQLRPPADVLSAFANNAFLKERVSDAIEHFATQGDGNHFFFVGRIKSTG
                     DVALVTHHGSRKPGALLYKAGMAVAEKFRQKLSPQTPRHNAWIPAETREGEAYWAALQ
                     GIRAWTKTNHFAIHDRVAEALGAKVADRFWNEHNFIFRKSDGLFYHAKGATPAWSDFA
                     ADSSGLTLIPLNMAEPILIARGRNADNGLGFAPHGAGRNLSRTAYIRRHAEKPESQLV
                     AEQTKGIDVRFFSGIPDVSELPGAYKSAATVRRQIAHYGLAEIVDEIVPLGCIMAGEW
                     QRNAPWRRGRRAVAPTGDEG"
BASE COUNT          319 a          718 c          676 g          311 t
ORIGIN      
        1 cgccgcctcg cgccgcgcca gccggttgag caaggtcgac tttccggcgt tgggcggccc
       61 ggcgatggcg atgacaatcc cgtcgcgcag ccgttcgccg cgccggccgt cggcgagcgc
      121 ggcggcgatc tcatcgcgca gtcgcgtgac cgacgccagc gccggaccca cgagatcctc
      181 tggcacatcg ccttcgtcgg caaagtcgat ccgcgcctcg accaaggcga gcgcttcgat
      241 cagggtacgg cgccaggcct cggcacggtc gccgatcagg cccttgagct ggcggaacgc
      301 ctgccgccgc tgcgccggcg tctccgccgc gatcaggtcg gcaaggcctt ccacggcggt
      361 cagatcgaga cggccgttct caaacgcgcg gcgcgtgaac tcgcccgcct ccgccggccg
      421 gcacccttcg atccttccga gcgcgtcgag caccgcggcg acaaccgcgt ggccgccgtg
      481 aatttgcaac tcggccatgt cctcgccggt ctcgctgtgc ggcgccggga accagagcgc
      541 cagcgcctcg tcgatgacat cgccgttttc cggatcgcgc acgcgcgcga gcgccgcctg
      601 gcgcggcggc ggcacgcggc cgatcagctt ttgcagcgcc gcgcgcgcct gcggaccgca
      661 aacacgcacc accgcaatcg ccgccggcgg ccggccggag gagagggcga agatcgtggg
      721 gcgcagtcgg gccattgacg gaacgccaga ctcaacaaaa tgcaggatag agcaaagcgc
      781 tcccactatc cctcgtcgcc cgtcggcgcc accgcgcgcc gtccgcgacg ccacggggcg
      841 ttgcgctgcc attcgccggc catgatgcag ccgagcggca cgatctcatc gacaatctcg
      901 gcgaggccgt agtgcgcgat ctggcggcgc accgtcgcgg cgctcttgta agcgcccggc
      961 aactcggaga catcgggaat gccgctgaag aagcgcacgt cgatgccttt tgtctgctcc
     1021 gccaccaact ggctctcggg tttctcggca tggcgccgga tatacgccgt gcggctcaaa
     1081 ttgcggccgg cgccatgcgg cgcgaagccg agcccattgt cggcgttgcg tccgcgcgcg
     1141 atcaggatcg gctcagccat gttgagcggg atcaaggtca gcccgctgct gtcagccgcg
     1201 aagtcggacc acgccggcgt cgcgcccttg gcatgataga acaggccgtc cgacttcctg
     1261 aaaatgaaat tgtgctcgtt ccagaaccgg tccgcgacct tggcgccgag cgcctcggcg
     1321 acacgatcgt gaatcgcgaa gtggttcgtc ttggtccacg cgcggatccc ctgcagcgcc
     1381 gcccagtagg cctcgccctc gcgggtctcc gccggaatcc acgcgttatg ccgcggcgtc
     1441 tgcggcgaaa gtttctgccg aaatttttcg gctaccgcca tgcccgcctt gtagagcaac
     1501 gctccgggct tgcgcgagcc gtgatgggtt accagcgcga catcgcccgt ggatttgatc
     1561 cggccgacaa agaaaaaatg attgccgtcg ccctgggtcg cgaagtgctc gatggcgtcg
     1621 ctcacgcgct ctttcaggaa cgcgttgttt gcgaaggccg acagcacatc ggccggcggc
     1681 cgcaactgtt cgccgcgcgg ccggccgcca ccgccgaaat gcgagagccg catcgcggca
     1741 tcgagcgccg ctttcggcgc gaggtcgcga aagattgaca ccgcaagcga gcagcagatg
     1801 tcggccgagt gcatgcccgg atgaatcgca ttctcggccg cgacaacgcc gccgaccggg
     1861 atggtgccgg gcgcagagcc cgccggacag gcgtcgggca tgacggcgcc ggcgcgcacg
     1921 gttggcaccc gcatgagctc ggtcatgtgc tgctcgacgg cggcgacatt ggcgatctcg
     1981 tcggcgtcct caggcgcgat gttcagccga tgggccagcg cacc
//
LOCUS       DATMQB010000073         3353 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2192190, whole genome shotgun sequence.
ACCESSION   DATMQB010000073 DATMQB010000000
VERSION     DATMQB010000073.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3353)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3353)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3353
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2192190"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..531
                     /locus_tag="VNY79_02465"
     CDS             <1..531
                     /locus_tag="VNY79_02465"
                     /inference="COORDINATES: protein motif:HMM:NF015431.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR substrate-binding domain-containing
                     protein"
                     /protein_id="HWX71343.1"
                     /translation="IAIELALTNRNEDLARRDADIAVRMVRPTQSALIARRIGASRIR
                     LYAHRDYLARFGEPRSLADLKNHCVIGFDRDNSSFRGAGDFAQRLHREDFRFRCDSDL
                     AQLAALRAGIGIGGCQENIARRTPELVAVLPNAIQYALEVWLAMHEDLKATRRVGLIF
                     DRLATGLTDFVRGRSV"
     gene            complement(689..1081)
                     /locus_tag="VNY79_02470"
     CDS             complement(689..1081)
                     /locus_tag="VNY79_02470"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012429996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HWX71344.1"
                     /translation="MEILQPPNWPRPNGFSNGIAARGRLIFIAGQIGWDEHCRIQSSD
                     FSEQVRQALKNIIAVLAASDGKPEHIVRMTWYVTSKREYLASYKSIGKVYRELIGRHY
                     PAMTAVEVAALVEDEAKVEIEATAVIPD"
     gene            complement(1152..2342)
                     /locus_tag="VNY79_02475"
     CDS             complement(1152..2342)
                     /locus_tag="VNY79_02475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX71345.1"
                     /translation="MSDKSYLDWPFFEERHRKLERELDAWAAANVAHHHDSDVDAACR
                     TLVGKLGAAGWPRHAIGGTAYGGVSDVIDTRAICLIRETLARHSGLADFAFAMQGLGS
                     GAITLYGTEEQKRAYLPLAASGEAIAAFALSEPDAGSDVAALSCAAREDGDAYVLNGE
                     KTWISNGGIADFYVVFARTGEGEGSRGISAFIVDAGVPGFIIAERIEVIAPHPLARLK
                     FTECRIPKSRLLGAAGEGFKIAMRNLDVFRTSVAAAALGFARRALDEALNRATTRGMF
                     RQTLADFQLTQAKLAQMATAVDASALLTYRAAWLRDQGKTVTREAAMAKLTATEEAQR
                     VIDAAVQMWGGLGLVRGQPVEQLYREIRALRIYEGASEVQQLIVARELLREAKASQAA
                     ASVR"
     gene            complement(2417..3268)
                     /locus_tag="VNY79_02480"
     CDS             complement(2417..3268)
                     /locus_tag="VNY79_02480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006217226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase family protein"
                     /protein_id="HWX71346.1"
                     /translation="MDGEMNAALAAGNRAPIAGYQAKHFIWEVAGKVATVTLNRPERK
                     NPLTFESYAELRDVFRALKNAPDVSSVVIQGAGENFCSGGDVHEIIGPLTKLDMPGLV
                     TFTTMTGDVVKAMRACPQPIVAAIDGICAGAGAIIAMASDLRVGTTRSKVAFLFTRVG
                     LAGCDMGACSILPRIIGQGRASDLLYTGRAMSAEEAYAWGFYNRLCAPEALRGEAMAL
                     AAELANGPSFAHGVTKRMLHQEWAMGVDEAIDAEAQAQAVCMMTQDFRRAYHAFVAKQ
                     KPRFEGN"
BASE COUNT          525 a         1137 c         1103 g          588 t
ORIGIN      
        1 atcgcgatcg agcttgcgct caccaaccgc aacgaggacc tcgcgcggcg cgacgccgat
       61 atcgccgtgc gcatggtgcg gccgacgcaa agcgccctca ttgcgcggcg catcggcgcc
      121 tcgcgcatca ggctctatgc ccatcgcgac tatctcgccc gcttcggcga gccgcgctcg
      181 ctcgccgacc tgaaaaacca ttgcgtgatc ggcttcgacc gcgacaattc ttccttccgc
      241 ggcgccggag acttcgccca gcggctgcat cgcgaggatt tccgcttccg ctgcgacagc
      301 gacctcgctc agctcgcggc gctgcgtgcc ggcatcggca tcggcggctg ccaggaaaac
      361 atcgcacggc gcacgccgga gctcgtcgcc gtgctgccga acgcgatcca gtacgcgctg
      421 gaagtctggc tcgccatgca cgaggattta aaggccaccc ggcgcgtggg tttgatcttc
      481 gaccgcctcg cgacaggtct gacggacttt gtgaggggtc gctccgttta gagcgggtcc
      541 cgatcgaact gaaacagtgc cgtcattgcg aggagcccga acgggcaacg aagcaatcca
      601 gtacttcgcg cgccaacgcc ggattgcttc gctacgctcg caatgacggg tcaatctgat
      661 cggaatctgc ccttgatggc atgacatcct agtcggggat gaccgcggtc gcctcgatct
      721 ccaccttggc ctcgtcctcc accagggccg ccacctcgac cgcggtcatg gccggataat
      781 gccggcctat cagctcgcgg tagaccttgc cgatgctctt gtaggaagcg agatactcgc
      841 gcttgctggt cacgtaccag gtcatgcgca cgatgtgctc gggcttgccg tcgctcgccg
      901 cgagcacggc aatgatgttc ttcaaggcct ggcgcacctg ttcgctgaaa tcgctgctct
      961 ggatgcggca gtgctcgtcc cagccgatct gtccggcaat gaagatgagc cggccgcgcg
     1021 cggcgatgcc gttggaaaag ccgttcggcc gcggccagtt cggcggttgc agtatctcca
     1081 tactcggatt tcctttctgt tcggccgatc cgctttccgg ccgatgctgt ttggtcatcg
     1141 aatttcctgg ctcatcggac ggacgccgcg gcttgtgaag ctttcgcctc gcgcagcagc
     1201 tcgcgcgcga cgatcaattg ctgcacctcg ctcgcgccct catagatgcg tagcgcgcgg
     1261 atctcgcgat agagctgctc gactggctgc ccgcggacga ggcccagtcc gccccacatc
     1321 tgcaccgccg catcgatgac gcgctgcgcc tcctcggttg cggtcaattt cgccatcgcc
     1381 gcctcgcgcg tgacggtctt gccctggtcg cgcagccagg cggcgcggta ggtgaggagc
     1441 gcggaagcat ccacggcggt cgccatctgc gcgagcttcg cctgggtaag ctggaaatcg
     1501 gctagcgtct gcctgaacat gccgcgggtg gtcgcgcggt tgagtgcctc gtcgagcgcg
     1561 cgccgcgcga agccgagcgc cgccgccgcg acggacgtgc ggaagacgtc gaggttgcgc
     1621 atggcgatct tgaaaccctc gccggcggcg ccgagcagcc gcgatttcgg gatgcggcac
     1681 tcggtgaact tgagccgcgc gagcggatgc ggcgcgatca cttcgatacg ctcggcgatg
     1741 atgaatcccg gcacgccggc atcgacgatg aaggcggaga tgccgcggct gccttcgccc
     1801 tcgccggtgc gggcgaacac gacgtaaaaa tcggcgatgc cgccgttgga gatccaggtc
     1861 ttctcgccgt tgagcacata ggcgtcgccg tcctcgcggg cggcgcagct gagcgctgcc
     1921 acgtccgatc cggcgtccgg ctcggagagg gcgaacgccg cgatcgcctc gcccgacgcg
     1981 gcaagcggca gataggcgcg tttctgctcc tccgtgccgt agagggtgat cgcgcccgag
     2041 cccaggccct gcatggcgaa ggcgaaatca gcgaggccgg aatggcgcgc cagcgtctcg
     2101 cggataaggc agatcgcgcg cgtgtcgatc acgtcggaaa cgccgccata ggcagtgccg
     2161 ccgatcgcgt ggcgcggcca gccggcggcg ccgagcttgc cgaccagcgt gcggcaggca
     2221 gcgtccacgt cgctgtcgtg gtggtgagca acgttggcag cggcccaggc gtcgagctcg
     2281 cgctcgagct tgcggtgccg ttcctcgaag aacggccagt cgagataact tttgtcgctc
     2341 atggcgatcg gaaagcgggc gcgacgcgat ctgcacgaag atgcccggcc cgcctgtccc
     2401 ctgccccctt cgattttcag ttgccttcga agcgcggctt ctgcttcgcc acgaaggcat
     2461 gataggcacg gcggaagtcc tgcgtcatca tgcagaccgc ctgcgcctgc gcctcggcgt
     2521 cgatggcttc atccacgccc atcgcccatt cctggtgcag catccgcttg gtgacaccgt
     2581 gggcgaacga cggcccgttg gcgagctcgg cggcgagcgc catggcttcg ccgcgcagcg
     2641 cctcgggcgc gcagagccga ttgtagaatc cccaggcgta cgcctcctcc gcgctcatcg
     2701 cccggccggt gtacagcaga tccgaggcgc gcccctggcc gatgatccgc ggcaggatgc
     2761 tgcacgcgcc catgtcgcag ccggcaagtc ccacgcgggt aaagaggaac gcgaccttgc
     2821 tgcgggtcgt gccgacgcgc aggtcggacg ccatggcgat gatcgcaccg gcgccggcgc
     2881 agatgccgtc gatggcggca acgatcggct gcggacaggc gcgcatcgcc ttcacgacgt
     2941 cgccggtcat ggtggtgaag gtgacgaggc ccggcatgtc gagcttggtc agcggcccga
     3001 tgatctcgtg cacgtcgccg ccggagcaga aattctcgcc cgcgccctgg atgacgacgc
     3061 tgctgacgtc gggagcattc ttcaatgccc ggaacacgtc ccggagctcg gcataggatt
     3121 cgaaggtcag cggattcttc cgctccggac ggttgagcgt caccgtcgcc accttgccgg
     3181 cgacttccca gatgaaatgc ttcgcctggt acccggcgat cggcgcacgg ttgccggcgg
     3241 cgagcgccgc attcatctca ccgtccattg cgcttctcct cccccttgtc gttcggcgac
     3301 acgaggccgg gacgctgcag cccgagcttg agcttggcga gcaggcgata ggt
//
LOCUS       DATMQB010000074         3448 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3740438, whole genome shotgun sequence.
ACCESSION   DATMQB010000074 DATMQB010000000
VERSION     DATMQB010000074.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3448)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3448)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3448
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3740438"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..414
                     /gene="ccmE"
                     /locus_tag="VNY79_02485"
     CDS             <1..414
                     /gene="ccmE"
                     /locus_tag="VNY79_02485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HWX71347.1"
                     /translation="AVALVLGALRDSIVFFNSPSDVVEKHVAPGARIRLGGLVKDGSV
                     VRGSDLKVHFEVTDGSRALPVNYQGVLPDLFREGQGVVAEGVLDGAGIFNADTILAKH
                     DETYMPKEVAAALKKTGHWKDDYGKAAMPVAGAGR"
     gene            554..2542
                     /locus_tag="VNY79_02490"
     CDS             554..2542
                     /locus_tag="VNY79_02490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008135090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme lyase CcmF/NrfE family subunit"
                     /protein_id="HWX71348.1"
                     /translation="MIAELGHYALMLALGLALIQGSMPILGTRSGDAVLASMASPIAL
                     AQFAFVAVAFGALAVCYVTSDFSVLNVYENSNSTMPLVYRLTSIWGNHEGSMMLWVFI
                     LALFGALVAAFGGNLPTALKANALGVQAWIAAAFQLFILTTSNPFLRLADAPFEGRDL
                     NPILQDPGLAFHPPLLYLGYVGFSIAFSFAIAALIEGRIDAAWARWVRPWVLGAWMCL
                     TLGIAGGSYWAYYELGWGGFWFWDPVENASLMPWLAGTALLHSAVVMEKRGALKVWTI
                     LLAILAFSLSLIGTFLVRSGVLTSVHAFAVDPRRGIFILAILVMFIGGALLLFAARAP
                     LLKQGGLFAPISREGALVLNNLFLTTACAAVFVGTLYPLALEALTDDKISVGPPFFNA
                     TFAPLFIPLLLAMPFGPLLGWKRGDIVGAAQRLLAAAMLATLAIAAAFALQHGGPVLA
                     PFGIGLAVFIMMGALVDVAERTMILRLPFGTALRRAAGLPRSAWGTVLAHFGIGVTLF
                     GIVSVTAWGSERIAALRIGDSVDVAHYRLTFEGLSDRAGPNYRERVGRFAVRRTSGEW
                     LGLMEPSRRSFPARNMATTEAALMTRRLSQLYLSLGDRNPDGSVPVRLYFKPQVLMIW
                     LGALIMFAGGGLSLSDRRLRVGAPRPARKAIAALQAAE"
     gene            2548..3030
                     /locus_tag="VNY79_02495"
     CDS             2548..3030
                     /locus_tag="VNY79_02495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008193622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c-type biogenesis protein"
                     /protein_id="HWX71349.1"
                     /translation="MRRLRLCTLLLALLPVLAAPGPALAVEPSEMLKDAALETRARAL
                     SKELRCMVCQNQSIDDSEAPLAHDLRVLVRERLQAGDSDAQVVDFLVARYGEFVLLNP
                     RLSWRTAVLWGLPPAVLLLGMLALIVVVRRRSMTPAAEMANLTAAEEARLSDLLQREN
                     "
BASE COUNT          473 a         1154 c         1147 g          674 t
ORIGIN      
        1 gcggtcgccc tcgtcctcgg cgcgctgcgc gattcgatcg tgttcttcaa ctcgccgagc
       61 gacgtggttg aaaagcacgt cgcgcccgga gcgcgcatcc gcctcggcgg cttggtcaag
      121 gacggcagcg tcgtgcgtgg cagcgatctc aaggtccatt tcgaagtcac cgacggcagc
      181 cgcgcgctgc cggtcaatta tcagggcgtt ctgccggact tgttccggga agggcagggg
      241 gtcgtggccg aaggcgtgct cgacggagcg ggcatcttca atgcggacac gattctcgcc
      301 aagcatgacg agacctacat gccgaaagag gtggccgccg ccctcaaaaa gacggggcac
      361 tggaaggacg actacggcaa ggcggcgatg ccggtcgcgg gagcgggcag gtgatggacg
      421 gcgctggcgc gatttcagct tccgctgaaa aggaagggtc cgatcgccgg aggcgatcgg
      481 gcagggcgtc cgggcagccg acggtcgccg gcttcttcgg tgcagcggcg cggcgtcggg
      541 gggagggccg ccaatgatcg cggaactcgg acattacgcg ctgatgcttg cgctcgggct
      601 tgcgctcatt cagggctcga tgccgatcct cggtacccgc agcggtgacg ccgtgctcgc
      661 gagcatggcc agccccatcg cgctggcgca attcgccttc gtcgccgtcg cctttggtgc
      721 cctcgcggtg tgctacgtca catcggactt ctcggtgctc aacgtttacg agaattccaa
      781 ctcgacgatg ccgttggtct accggctcac cagcatctgg gggaaccatg aaggctccat
      841 gatgctgtgg gtgttcattc tcgccttgtt tggcgcattg gtcgcggcct tcggcggcaa
      901 tctgccgacg gcgctcaagg ccaacgcgct cggggtgcag gcgtggattg ccgccgcctt
      961 tcagctgttc attctcacca cgtcgaatcc gttcctgcgt ctcgccgacg cgccgttcga
     1021 gggccgcgat ctcaatccga tcctccagga cccgggcctc gcctttcatc cgccgctcct
     1081 ctatctcggc tacgtcggtt tctcgatcgc cttctcgttc gcgattgccg cccttatcga
     1141 gggccgcatc gacgcggcgt gggcgcgctg ggtgcggccg tgggtgcttg gcgcatggat
     1201 gtgcctcacg ctggggatcg cgggcggctc gtattgggcg tactacgaac tcggctgggg
     1261 cggcttctgg ttctgggatc cggtcgagaa cgcatcgctg atgccgtggc ttgccggcac
     1321 ggcgctgctg cactccgccg tggtgatgga gaagcgcggc gcgctcaagg tctggaccat
     1381 cctgctcgcc attctcgcct tctcgctgtc gctcatcggt actttcctgg tgcgctcggg
     1441 cgtgctgact tcggtccatg ccttcgccgt cgaccctcgg cgcggcatct tcattctcgc
     1501 gatcctggtg atgttcatcg gtggcgcgct gctgctgttc gcggcccgcg cgccgctgct
     1561 caagcagggc ggcctgtttg cgccgatctc gcgcgaaggc gcgctcgtcc tcaacaattt
     1621 gttcctcacc acggcctgcg ccgcggtctt tgtcgggacc ctctatccgc tcgcgctcga
     1681 ggcattgacg gacgacaaga tttcggtcgg gccgccattc ttcaacgcga cgttcgcgcc
     1741 gttgttcatt ccgcttctgc tggcgatgcc gttcgggccg ctgctcggat ggaagcgcgg
     1801 cgacatcgtc ggcgccgcgc aacggctgct ggcggcggca atgctcgcca cgctcgccat
     1861 cgcagcagca ttcgcgctcc agcatggtgg ccccgtgctc gcgccgttcg gcatcggtct
     1921 ggcggtcttc atcatgatgg gtgcgctcgt cgatgtcgcc gagcgcacca tgatcctgcg
     1981 gctgccgttc ggaacggcgc tgcggcgcgc tgcaggcctg ccgcgctcgg cctggggcac
     2041 tgtgctggcg catttcggca ttggcgtcac gctgttcggc attgtctcag tgaccgcctg
     2101 gggcagcgag cgcattgccg cgctgagaat cggcgacagc gtcgacgtcg ctcactaccg
     2161 gttgaccttc gagggtcttt ccgaccgcgc cggccccaac taccgcgagc gcgtcggccg
     2221 tttcgccgtg cgccgcacca gcggcgagtg gctcggtctc atggagccga gccggcgcag
     2281 cttccccgcc cgcaacatgg cgaccaccga ggccgcgctg atgacgcggc ggttgagcca
     2341 gctctatttg tctctcggcg atcgcaatcc ggacggcagc gtaccggtgc ggctctattt
     2401 caagccgcag gtgctgatga tctggctcgg cgctctgatc atgttcgccg gcggtggcct
     2461 ctcgctctcc gatcggcggc tgcgcgtggg cgcgccgcgg ccggcgagga aggccatcgc
     2521 ggcgctgcag gcggcggagt gactgccgtg aggcggctgc gtctctgcac gctgctgctc
     2581 gcgcttctgc ccgtgctggc ggcgccgggc ccggcgctag ccgtcgagcc cagcgaaatg
     2641 ctcaaagacg ccgcgctcga gacacgcgct cgcgcgttgt ccaaggaatt gcgctgcatg
     2701 gtgtgccaga atcagtcgat cgacgattcc gaggcgccgc tggcgcacga tcttcgcgtg
     2761 ctggtgcgcg agcggctcca agccggcgac agcgacgccc aggtggtcga ctttctggtc
     2821 gcccgctacg gcgagttcgt gctgctcaac ccgcggctct cgtggcgcac ggcggtcttg
     2881 tggggactgc cgccggccgt gctgcttctc ggcatgctgg cgcttatcgt cgttgtcagg
     2941 cggcggagca tgacgcccgc agcagaaatg gcgaacctta ccgccgccga ggaagcgcgg
     3001 ctttccgatc tcttgcagcg cgaaaactga tcgcgcctcc cgaggcggca agcgtccaga
     3061 ttcaattcgc cgccgttccg ctcctgcctc tttctcttgt aattcttggc accggaaccc
     3121 acggcaaacc gcggaacctt gctgtaacag cgtggttgcc cacgaaaatt cccgggcgcc
     3181 gcattacgaa attttaatgt cgccgtcagc gcgccgtaag gcgcgcgctc ccacattgat
     3241 gggaagaacg gggcccgacg gcgccgttgc gaggcaaccc cagatttgga gacggctaaa
     3301 tgaaccaaac aacaccaccc tcacgccgca gcctgtccgc gcggcgcgtg gcgctcctgg
     3361 cgacgactat cgccggtttc ggcgccgcag ccttcctcgc gccgtacgcg gcgccgaagg
     3421 gagatttctt cgccggtccc gcgcatgc
//
LOCUS       DATMQB010000075         2100 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4050983, whole genome shotgun sequence.
ACCESSION   DATMQB010000075 DATMQB010000000
VERSION     DATMQB010000075.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2100)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2100)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2100
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4050983"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..721
                     /locus_tag="VNY79_02500"
     CDS             <1..721
                     /locus_tag="VNY79_02500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
                     /protein_id="HWX71350.1"
                     /translation="LLQIAAHSRLNILISGGTGSGKTTLLNAVSQHIETTERIITIED
                     AVELRLQQPHVVQMETRPPNIEGAGHIPQRELVRNALRMRPDRIIVGEVRGPEAFDML
                     QAMNTGHDGSMTTVHANSPRDALYRVENMVMMANLSLPLRAIRMQVASALNLVVHIER
                     MRDGVRRVQNVAEIAGMEGDVITTRELFSFRYIGEKRDGTIDGVFETTRMRPDFVSRA
                     ARYGLDGELLDVLGIIGAMRA"
     gene            738..1700
                     /locus_tag="VNY79_02505"
     CDS             738..1700
                     /locus_tag="VNY79_02505"
                     /inference="COORDINATES: protein motif:HMM:NF012694.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HWX71351.1"
                     /translation="MSQLVLAVLGGVVLLGAALFAALRADRRRESRQQHLRAVVAVGP
                     REVEPELSLRRPLSRAGVRDFFMLSALWARLEAAFAATGDRIGLPHLAVVGLIAAAAA
                     IGFATGIMGYGPGLAMPVGVTAGVVAAALLLRLAQTRYQNQFLDAFPDALDLIARAVR
                     AGLPVNDAMQVAGHEVRPPVGLEFQRTLEEMRIGIDIDEAMQHTADRIRVPDFRFFVV
                     ALKLQRRTGGSLAETLGNLSSIIRRRKEIRLKSRALTSEAKASATVLGLLPVFVGALL
                     FFLNGELMAPLLSDPRGRFMLGVAVLSLMAGLTVMAVMIRRSVR"
     gene            1703..>2100
                     /locus_tag="VNY79_02510"
     CDS             1703..>2100
                     /locus_tag="VNY79_02510"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71352.1"
                     /translation="MPPTETLFDTIGSYLTIQIGQITLGPVETAIVIAAFAAALLSAY
                     YLWRIGTQEERLDRLVALRGAAVDRVVREERPRWYERIGGIVAASPAIGRAEQQRLLG
                     VLASAGIKGQASLSGFVASKLCAGFVWTALV"
BASE COUNT          327 a          702 c          699 g          372 t
ORIGIN      
        1 tctgctgcag atcgccgcac attcgcgcct caatattctg atctcgggcg gcaccggctc
       61 cggcaagacg acattgctga acgctgtgtc gcaacacatc gagaccaccg agcgcatcat
      121 cacgatcgaa gacgccgtcg agctgcggct gcaacagcca cacgtcgtcc agatggagac
      181 gcgccccccc aacatcgaag gggccggcca tatcccgcag cgcgagctgg ttcgcaatgc
      241 attgcgcatg cgccccgacc gcatcatcgt cggcgaggtg cgcggccccg aggccttcga
      301 catgctgcag gcgatgaata ccgggcacga cggctcgatg acgacggtgc atgccaattc
      361 gccgcgcgat gccctctacc gcgtcgaaaa catggtgatg atggcgaatt tgagcctgcc
      421 cttgagggcg atccgcatgc aggtcgcgag cgcgctcaat ctcgtcgtgc atatcgaacg
      481 catgcgcgac ggtgtccgcc gcgtgcagaa cgtcgccgag atcgccggca tggaaggcga
      541 cgtcatcacc acccgcgagc tcttcagctt ccggtatatc ggcgaaaagc gcgacggcac
      601 gatcgacggc gtcttcgaga cgacccgcat gcgccccgat ttcgtctccc gcgccgcgcg
      661 gtacggcctc gacggggagt tgctcgacgt gctcggcatc atcggagcga tgcgcgcatg
      721 atgccgaggg gcaaggtatg agccagctcg ttcttgccgt cctcggcggc gtcgtcctgc
      781 tcggtgcggc gctgttcgcg gcgctgcgcg ccgaccgccg gcgcgaaagc cggcagcagc
      841 acttgcgcgc cgtggtcgcg gtggggccgc gcgaagtcga gcccgagctc tcactgcggc
      901 ggccgctgtc gcgagcggga gtacgagact tcttcatgct ctcggcgctg tgggcgcggc
      961 tcgaggcggc gttcgcggcg accggcgacc ggatcggcct gcctcacctc gcggtcgtcg
     1021 ggttgatcgc ggcggctgcg gcaatcgggt tcgccacggg catcatgggc tatgggcccg
     1081 gtcttgccat gccagtcggc gtcaccgcgg gggttgttgc ggccgcgctg ctgctgcggc
     1141 tcgcacaaac ccgctaccag aaccagtttc tcgacgcctt tcccgacgcg ctcgatctga
     1201 tcgctcgcgc ggtaagagcc ggtctcccgg taaacgacgc gatgcaagtt gccggccacg
     1261 aggtgcgtcc tccggtgggc ctcgaatttc agcggaccct cgaggaaatg cgcatcggca
     1321 tcgacatcga cgaggcgatg cagcacaccg ccgaccggat ccgcgtgccg gatttccgct
     1381 ttttcgttgt cgcgctcaaa ttgcagcggc gcaccggcgg cagtctggcc gaaaccctcg
     1441 gcaatctgag cagcatcatt cgccggcgca aggagatccg tctcaaatcc cgcgcgctga
     1501 cctcggaagc gaaagcctcc gcgacggtgc tcgggctgct gccggtcttc gtcggggcgc
     1561 tgttgttttt tctcaacggt gagctgatgg cgccgttgct ctcggatccg cgcggccggt
     1621 tcatgctcgg cgtggcagtc ctcagcctga tggccggcct caccgtgatg gccgtcatga
     1681 tcaggcggag cgtgcgatag ccatgcctcc caccgaaacg ctattcgata ccatcgggtc
     1741 ctacctgacg atccaaatcg gtcagatcac cctcggtccg gtggagactg cgatcgtaat
     1801 cgcggccttc gccgcggcgc tgttgtcggc gtactatctc tggcgtatcg gcacgcagga
     1861 ggaacgcctc gaccggctgg tcgcgctgcg cggcgccgcg gtcgaccgag tggttcgcga
     1921 agagcgcccg cgctggtacg agcggatcgg cggtatcgtg gcggcgagcc cggccatcgg
     1981 cagggccgag cagcagagac tgctcggcgt tctcgcctcg gccgggatca aggggcaggc
     2041 cagcctttcc ggctttgtcg cgagcaagct ctgcgccggc tttgtgtgga ccgcgctggt
//
LOCUS       DATMQB010000076         4234 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_330063, whole genome shotgun sequence.
ACCESSION   DATMQB010000076 DATMQB010000000
VERSION     DATMQB010000076.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4234)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4234)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4234
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_330063"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            76..984
                     /locus_tag="VNY79_02515"
     CDS             76..984
                     /locus_tag="VNY79_02515"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: protein motif:HMM:NF024758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HWX71353.1"
                     /translation="MAETTNALAALSDSTAQLVERTARSVVAVHSGGRWPASGIHWRS
                     GIVVTAEEVLERDENIRLTLPGGRLVEASLAGRDPTTDVAVLRFQPDGLPVAATTNAA
                     PRAGDVVLAVGNHEGSSLAALGIVALAGGPWHSARGGTIDNFIRLDLALSPVGEGGAL
                     VGAHGQVMAMTVLGPRHRAIAIPASTIERAVDQLLARGQVFRGYLGAGLRPIGRERAS
                     GGSAGSADGRGVLVVSLDPDGPSRRAGLLLGDIVTAWNGKPIDRVREVMHLLGPESVG
                     TTVDLGLTRGGAPAALKVVIGERPVK"
     gene            1027..1665
                     /locus_tag="VNY79_02520"
     CDS             1027..1665
                     /locus_tag="VNY79_02520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013530169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HWX71354.1"
                     /translation="MVAIVIFSVDQTLRRRLEQLPRKDPAITLVGIADSPAALLALAE
                     RHDLDVVLSGEVPAAELLADWQARHRRPAWIVFLAKADEQKSLEALGAGASAVLSRSA
                     DLTEIVAVLRALASGFIVLQRPLLVALLDQSAAAAEPSNRDADGTPRLTAREIEVLAA
                     LADGASNKEIARRLDISFHTVKFHVAAILDKLEAESRTEAVVKASQLGIVML"
     gene            complement(1680..2831)
                     /locus_tag="VNY79_02525"
     CDS             complement(1680..2831)
                     /locus_tag="VNY79_02525"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013087.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HWX71355.1"
                     /translation="MAAPLSRLFTRVAYGATQLPRVAWYVGHGLALRRLSETAARSEG
                     RKTPRRARTGAPVPDRNSVYADMAALFLQDLANVEAGIYPLPADHDGSWLTSIRRSRL
                     FFADLPDIHRRRERRVHDEVLTDETRGKRPHYYLQNFHFQSGGWMTDESAERYDTQVE
                     VLFNGTANAIRRQALPQLLEAFAGRDQRQLKLLDIGCGTGRFLDFVKQAWPRLAACGL
                     DMSEAYVRHAKRGLARRSRTRFVVGKAEAIPAPDNSHDAVTGIFLFHELPPQVRRAVL
                     AECARVLKPGGRLVLLDSLQRGDRPDYEGLLELFPQNYHEPYYLSYIKEDFGALAGAC
                     GLTHVRDVQAFVAKVMVFDKPAASPVNFTLARTIHSDGRVGIKPRAQRR"
     gene            complement(2873..3187)
                     /locus_tag="VNY79_02530"
     CDS             complement(2873..3187)
                     /locus_tag="VNY79_02530"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71356.1"
                     /translation="MHTVLWTFKVPAGTSKAQLVETINATAHTYEGIPGLIRKYYGIA
                     PEGGSLVGIYLWANKAVADAFYTAEWLAMVAKRWGAPPQRQEWETPMVVESAERRPIA
                     AE"
     gene            3362..3607
                     /locus_tag="VNY79_02535"
     CDS             3362..3607
                     /locus_tag="VNY79_02535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2188 domain-containing protein"
                     /protein_id="HWX71357.1"
                     /translation="MVHVTYKVVRHEDGWAYTVDGVFSESFPTHEEALEAARHAAAEQ
                     GQPGRSETIEYEDEHGKWHTELALGTDRPETDVEDSA"
     gene            complement(3784..4014)
                     /locus_tag="VNY79_02540"
     CDS             complement(3784..4014)
                     /locus_tag="VNY79_02540"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71358.1"
                     /translation="MRTMLVALSVAAGLGLVCWQSASAAPVNPAALQQAATAAAATGQ
                     VQNAGYRHRHGGYVKCYHELVVGPYRCHRFWF"
BASE COUNT          745 a         1377 c         1407 g          705 t
ORIGIN      
        1 gcccatccgg ccagtagcgg cgcgttttgg ccaatgccaa gtctcggcca tgcaaacatc
       61 cccggagaac ttgccatggc cgagaccacc aatgcccttg ctgcgctttc tgacagcacc
      121 gcgcaactcg ttgaacgcac cgcacgcagc gttgtcgccg tccatagcgg cggccgatgg
      181 ccggcgagtg gaatccactg gcgttccggc atcgtcgtta ccgcggaaga agttctggaa
      241 cgagacgaaa acatcagact tacgctcccc ggtggccgcc tcgtcgaagc gtccctcgcc
      301 gggcgagatc cgaccaccga tgtcgccgtc ctgcgctttc agcccgacgg ccttccagta
      361 gcggcgacca caaacgccgc gccgcgcgcc ggcgacgtgg ttctggccgt ggggaatcac
      421 gagggctcat cactggccgc gctgggcatc gtcgccctgg cgggcgggcc ttggcacagc
      481 gctcgcggcg gcaccatcga caacttcatt cgtcttgacc tcgccctgag cccggtcggc
      541 gaaggcggcg ccttggtcgg tgcgcatggc caggtcatgg cgatgaccgt cctcggcccg
      601 cgtcaccgtg ccattgccat tccggcgtcg acgatcgagc gcgcggtcga ccagcttctg
      661 gccaggggcc aagtatttcg cggctatctc ggcgcgggtc ttcggcccat cgggcgcgaa
      721 cgtgcatcgg gcggctcggc gggatcggct gacgggcggg gcgttctcgt cgtcagcctc
      781 gatccggacg ggccatctcg ccgcgccggg ttgctgttgg gcgacattgt caccgcgtgg
      841 aacggcaagc cgatcgatcg tgttcgcgag gtcatgcact tgctcggccc cgagagcgtc
      901 gggacgaccg tcgatctcgg cttgacacgc ggcggggcgc cggctgcgct gaaggttgtc
      961 atcggcgagc gaccggtgaa gtagtcggcg cgactgaaac cagcgcaagc gggcagccaa
     1021 gaattcatgg tcgccatcgt gatcttttcg gtcgatcaaa cattgcgccg ccgcctggaa
     1081 cagctgccgc gcaaggatcc ggcgatcact ctcgtgggta tcgccgacag tcccgccgca
     1141 ctgctcgcac tggcggaaag gcatgacctc gacgtcgtgt tgtcgggaga ggtcccggcg
     1201 gccgagctac tggccgattg gcaagctcgg caccggcgcc cggcgtggat cgtatttctg
     1261 gcgaaggccg acgagcagaa gagcctcgag gcgcttggcg ccggcgcatc ggccgttttg
     1321 tctcgatccg cagatctgac ggaaattgtc gctgtgttgc gggccttggc cagcggcttc
     1381 atcgtgctgc agcgcccgct tcttgtggcg ctgctcgacc agagcgccgc ggccgccgaa
     1441 ccatcgaacc gagatgccga tgggactccg cggttgaccg cccgcgagat cgaggtgctc
     1501 gccgcgttgg cggacggcgc ctccaacaag gagatcgcgc gtcggctgga catttccttt
     1561 cacaccgtca agttccacgt cgccgcgatc ctcgacaagc tcgaggcgga gagccggacg
     1621 gaagcagtcg tcaaggcgag ccagcttgga atcgtgatgc tgtgaaccgc gctgcgcgcc
     1681 taccggcgct gcgcacgcgg cttgatcccg acccggccgt ccgaatggat ggtgcgcgcg
     1741 agagtgaaat tgaccgggct cgcggccggc ttgtcgaaca ccatcacctt ggcgacgaac
     1801 gcctgcacgt cccgcacgtg cgtcagcccg catgcgcccg cgagcgcgcc gaaatcctcc
     1861 ttgatgtagc tcagatagta gggctcgtga tagttctgcg gaaaaagttc cagcaaacct
     1921 tcgtagtccg gccggtcgcc gcgctggagt gaatccaaga gcaccagtcg gccgcccggc
     1981 ttgagcaccc gcgcacattc ggcaagaacg gcgcggcgca cctgcggcgg caattcgtga
     2041 aacaggaaga tgccggtgac ggcatcatgg ctgttgtccg gcgccggaat ggcttccgcc
     2101 ttgccgacaa cgaacctggt gcgtgaccgg cgggctaagc cacgcttcgc gtgccgcacg
     2161 tacgcctccg acatgtccaa cccgcaggcc gcaagccgcg gccaagcctg cttgacgaag
     2221 tcgaggaacc ggccggtgcc gcagccgata tcgagcagct tcaattggcg ctgatcgcgt
     2281 ccggcgaacg cctcgagcaa ctgcggcaag gcttgtcgtc gtatggcatt ggccgtcccg
     2341 ttgaacagca cctcgacctg cgtgtcgtat cgctcggccg actcatccgt catccagccg
     2401 ccggactgga aatggaagtt ctgcagatag tagtggggcc gcttgccccg cgtctcatcg
     2461 gtgaggactt cgtcgtggac acggcgctcg cggcgccgat ggatgtcggg gaggtccgcg
     2521 aagaacagcc gcgagcggcg gatcgaagtc agccaagatc cgtcatggtc cgcgggaaga
     2581 gggtagatgc cggcctccac gttggcgagg tcctgcaaaa acagcgcggc catgtctgcg
     2641 tagacgctat tgcggtccgg caccggcgcg ccggtacggg cgcgccgcgg cgttttgcga
     2701 ccctcgctcc gcgcggcggt ttccgacagt cgacgcaggg cgagaccatg tccgacatac
     2761 caggcgaccc gaggcaactg ggtggcgccg taggcgacgc gcgtgaaaag gcgggacagc
     2821 ggagcagcca ttggtctcgc cacgcgtgat tacaagaggg ccgcctcggc ttctattcgg
     2881 cggctattgg gcgccgctcg gcgctctcga cgaccatggg cgtttcccat tcctgacgct
     2941 gcggcggtgc gccccagcgc ttggcaacca tcgcaagcca ctcggccgta tagaatgcat
     3001 cggcgacggc cttgtttgcc cagaggtaga tgccgacgag cgaaccgccc tcgggcgcga
     3061 tcccgtaata tttccggatc agcccgggga tgccttcgta ggtgtgcgcc gttgcattga
     3121 tcgtctctac gagctgcgcc ttggatgtgc ccgcgggcac cttgaacgtc cacaatacgg
     3181 tgtgcatgga gcatctccat ctggcagctt tcggcagcag gtcgagcttg aatcgatgcg
     3241 gccggcatgt caaagccgac gatcgacccg cgcagccgct tcggggttgg ccggagtcgg
     3301 gatcggcggg aacccggaat ataatacgca cttggtaagg tgcacgaggc aggtgaagcc
     3361 gatggtacac gtcacttaca aggtggtccg ccacgaggat ggctgggcct acaccgttga
     3421 cggggtgttc tcggaaagct ttcccaccca cgaggaagcg cttgaagccg cacgccacgc
     3481 cgccgccgaa cagggccagc cggggcggag cgaaacgatc gaatatgagg acgagcacgg
     3541 caaatggcat accgagctcg cgctcggcac cgatcggccg gagaccgacg tcgaggatag
     3601 cgcttaggcg gcctcaggat cagcgcaaga tagcgagtat cgaggcctgc tcacgccgac
     3661 tccctctccc cggtctggag agggagggca aagcttcatc gccgccgtca tcgaaacgag
     3721 gcaaagaact cgcctcgcgg cgcggcaaag cagctaaacg cacgcctgcg cctgcgcctg
     3781 cgatcagaac cagaagcggt ggcagcggta gggaccgacg accagctcgt gatagcactt
     3841 gacgtagccg ccgtgccgat ggcggtaccc cgcattctgc acctgacccg tagccgcggc
     3901 ggcggtcgcg gcctgctgca gggccgccgg attgaccgga gcggcgctcg cgctttgcca
     3961 gcagacgagg ccgagaccgg cggcgacact caaggcaact aacatcgtac gcatgggtat
     4021 tctaccctcc agacgccaac aaaggaaaat tacgccgcta ccgtgccgtt ccgcaaggct
     4081 gcagcgcgca tccggctcac tcgggcgcgc ggtgttgttg gaaaacctca acccgcaccg
     4141 gcagcacggc gccgaaccag gcggcgtgcg ccgtatggtc gcgatagtcg tcaccggttt
     4201 ccggatggag gaggatggtc agtccgtcgc ggtt
//
LOCUS       DATMQB010000077         4168 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_20759, whole genome shotgun sequence.
ACCESSION   DATMQB010000077 DATMQB010000000
VERSION     DATMQB010000077.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4168)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4168)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4168
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_20759"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..993
                     /locus_tag="VNY79_02545"
     CDS             <1..993
                     /locus_tag="VNY79_02545"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71359.1"
                     /translation="HSRAVRALRARFHVVGAVHPNPTSALIADYFDECIAFPTGDFFA
                     SVRTVAAAIAAHRPALILYLGVGMTAAVIALASLRLAPIQCASYGHTATTMSPVIDYF
                     ILPEDFVGSAECFSEAVLAVPRAAMPFAPRPVPQAARRPADGTVRVAIPASTMKLNPL
                     LFDALASIVAGARSRVAFQFFPLAATGLPYFELSRIERAAIPQATVFPEAPHERYMER
                     LAECDLFLCPFPYGNMNSIIDAFQLGLPGVCLDGIEAHAHADAAFFARIALPAEIVAG
                     SVDDYVAAAVKLIDDEAWRAHCTDIVCRADLDAAFFGGDAGLFAAAVEKLIWPD"
     gene            complement(1116..1376)
                     /locus_tag="VNY79_02550"
     CDS             complement(1116..1376)
                     /locus_tag="VNY79_02550"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008855 - exodeoxyribonuclease VII
                     activity [Evidence IEA];
                     GO_process: GO:0006308 - DNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HWX71360.1"
                     /translation="MAQNNNPNGGDVGQLPFERAIEELESIVRRLEEGKVPLEESIAI
                     YERGEALKRRCEELLRQAEARVEKITLDAAGKPSGAEPLDVE"
     gene            complement(1496..2425)
                     /locus_tag="VNY79_02555"
     CDS             complement(1496..2425)
                     /locus_tag="VNY79_02555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histone deacetylase family protein"
                     /protein_id="HWX71361.1"
                     /translation="MSTLLITHPACLQHLTPLGHPERPDRLRAVEQALEAERFQSLAR
                     VEAPTAPFEVIALCHPMDYIVQIRDATPSAGMVRIDADTSISPGSFEAALRAVGGAVH
                     AVDEVLTRKAANAFVATRPPGHHAETARPMGFCLFDNAAIAARYAQDHHGVARAAIVD
                     FDVHHGNGSQEIFWADKTVLYCSTHQMPLFPGTGAVGESGEHDTIVNAPLRPGDGGKA
                     FRAAFAERILPRLEDFRPELIIISAGFDAHMRDPLANLNLNEEDFAWATRKIMEVADG
                     CAEGRVVSVLEGGYDLEALANSAAAHVTALMRG"
     gene            complement(2534..>4168)
                     /locus_tag="VNY79_02560"
     CDS             complement(2534..>4168)
                     /locus_tag="VNY79_02560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase"
                     /protein_id="HWX71362.1"
                     /translation="AGEVLAPLNRIGDREGVTFKDGAVTTAPGWKEAYKTWRQGGWNG
                     LVAETEWGGQALPHVLNAACVEMWNAAAMAFGVGPLVSMSAIDALTAHGSESLKRAYL
                     GKLVSGEWIATMQLTEPQAGSDVGALRTRAERAAGGTYRITGQKIFITYGEHDLTDNI
                     IHFVLARLPDAPPGTRGISLFVVPKFLLNADGTPGARNDLRAHSVEHKLGIHGSPTCT
                     MIFGDHGGATAFIIGEENAGMACMFTMMNRARLGVGLQGVGIAERATQQALAYARERR
                     QGRTAGMPATESAPIIAHADIKRTLMSMRALTQAARSICYATAMALDRAERGADKATR
                     QAAHARASLLTPVAKAFSSDIGVEVASLGVQVHGGMGFIEETGAAQLLRDARIAPIYE
                     GTNGIQAIDLVTRKLPLAGGTAVEAYIGELRRIVEAVNAINDPALGWTGVRLEDAVES
                     LARTTAWLLAQLERNAQEALAGATPYLRLFGVASGGCLLAQQAVAALRLNIDAAPRIA
                     LARFFAENFAVQAGALERTVVEGAGGVLGADAALAG"
BASE COUNT          604 a         1437 c         1407 g          720 t
ORIGIN      
        1 cactcgcgcg ccgtccgggc gctgcgcgcg cgcttccacg tcgtcggcgc cgttcacccc
       61 aacccgacca gtgccttgat cgccgactat ttcgacgagt gcatcgcctt tcccacggga
      121 gacttcttcg cctccgtccg cacggtcgcc gctgccatcg cggcgcaccg gccggcgctg
      181 atcctctatc tcggcgtcgg aatgacagcc gcggtgatcg cgcttgcctc cctgcgcctg
      241 gcgccgatcc agtgcgcctc ctatggccat accgcaacca cgatgagtcc ggtgatcgac
      301 tatttcattc tgcctgagga ttttgtcggc tcggccgagt gtttttcgga agccgtgctg
      361 gcggtgccga gggcggcgat gccgttcgcg ccgcggccgg tgccgcaggc ggcgcggcgc
      421 ccggcagatg ggacggtacg cgtcgcgatc cctgcctcca ccatgaaact caatccgctg
      481 ctgttcgacg ccctggcgag cattgtcgcc ggcgccaggt cgcgggtcgc gtttcagttc
      541 tttccgctcg ctgccaccgg tcttccctat tttgaactat cgcggatcga gcgcgccgcg
      601 attccgcagg ccactgtgtt cccggaagcg ccgcacgagc gctacatgga gcgccttgcc
      661 gaatgcgact tgtttctttg cccgtttccc tacggcaaca tgaacagcat catcgacgcg
      721 ttccagctcg gtctgcccgg tgtgtgcctc gacggcatcg aggcccatgc gcatgccgac
      781 gccgcgttct tcgcgcgcat cgcgcttccc gccgagatcg tcgccggatc ggtggacgac
      841 tatgtcgcgg cggcggtcaa gctgatcgac gacgaggcgt ggcgtgcgca ctgcacggac
      901 atcgtctgcc gggccgatct cgatgcggca ttcttcggcg gcgatgccgg tctgttcgcc
      961 gcggcggtcg aaaagctgat ctggccggac taatacagac tttcggaatg tcgacgcgct
     1021 ctccccgtca tggccgggct tgtccggcac gaggccgggc gtgacgagtc cgcaattccg
     1081 agcgttggta tgatggggcg cggccgcgca acgcttcatt cgacgtccag cggctcggcg
     1141 ccgctcggct tgcccgcggc gtcgagcgtg atcttctcca cgcgcgcctc ggcctgccgc
     1201 aacagctcct cgcaccggcg cttgagcgcc tcgccgcgct cgtagatggc gatcgattct
     1261 tcgagcggca ccttgccctc ttccagcctt ctcacgatcg attcgagttc ctcgatcgcg
     1321 cgctcgaacg gcaactgtcc gacgtcgccg ccgttcgggt tgttgttttg ggccatgcgc
     1381 cggctctcca agttctgttt caatgtagcc cggatggagc gaagcgcaat ccgggtctgc
     1441 cggcccggat tttcgctgcg gcacgttccg cccgcgcgcg ttgcgttcgc cgcgtttatc
     1501 cccgcatcaa cgccgtgacg tgcgcggcag ccgagttcgc cagcgcctcg agatcgtagc
     1561 cgccctccag caccgagacc acgcggccct cggcgcagcc gtcggccacc tccatgatct
     1621 tgcgcgtcgc ccaggcaaaa tcctcctcat tgaggttgag gttggcaagc ggatcgcgca
     1681 tgtgcgcgtc gaagccggcg gagatgatga tgagctccgg ccggaaatcc tcaagccgcg
     1741 gcaggattct ctccgcgaag gcggcgcgga atgccttgcc gccgtcgccc ggccgcagcg
     1801 gcgcgttgac gatggtgtca tgctcgccgg actcgccgac cgcgccggtg ccgggaaaga
     1861 gcggcatctg gtgggtcgag caatacaaca ccgtcttgtc cgcccagaag atctcctgcg
     1921 agccgttgcc gtgatgcacg tcgaagtcga cgatcgcggc gcgggcgacg ccgtgatgat
     1981 cctgcgcata gcgcgcggca atggcggcgt tgtcgaacag gcaaaagccc atcgggcgtg
     2041 cggtctcggc atgatggccg ggcggccgcg tggcgacaaa ggcgttggcg gctttcctgg
     2101 tcagcacctc gtcgacggca tggacggcgc cgccgacggc gcggagcgcc gcctcaaaac
     2161 ttcccggcga tatcgaggtg tcggcatcga tccggaccat gcctgcgctc ggcgtggcgt
     2221 cgcgaatctg cacgatgtag tccatcggat ggcacaaggc gatcacttcg aaaggcgccg
     2281 tgggcgcttc gacccgcgcc agcgactgaa acctttccgc ctcgagcgcc tgctcgacgg
     2341 cgcgcagccg gtccggccgc tccggatggc cgagcggcgt caagtgttgc aggcaggcgg
     2401 gatgggtgat cagcagcgtg gacatcggcg gcgcagggca gggaggtaaa gcatacttcc
     2461 acagttaagc cggcgcggtc gcgggggaaa gatgcgcgtc aggcaaattc acccgcgtcc
     2521 gcaaaggcga gcttcagccg gcgagtgccg catcggcgcc aagaacgccg cccgcgccct
     2581 cgaccacggt acgttcgagc gcgccggcct gcaccgcgaa attctcggca aagaaccgcg
     2641 ccagcgcgat gcgcggcgca gcgtcgatgt tgagccgcag tgccgcgacc gcctgctggg
     2701 ccaacaggca accgccgctc gcaaccccga acagccgcag atagggcgtc gcgccggcca
     2761 gcgcctcctg cgcattcctc tcgagctggg ccagcagcca cgccgtggtc cgcgccaggc
     2821 tctcgaccgc atcttcgagc cgcaccccgg tccagcccaa ggccggatcg ttgatggcat
     2881 tgaccgcttc gacgatgcgg cgcagctcgc cgatataggc ctcgaccgcc gtaccgcccg
     2941 ccagcggcaa tttgcgcgtg acgagatcga tcgcctggat gccgttggtg ccttcgtaga
     3001 tcggcgcgat ccgcgcgtcg cgcaaaagct gcgccgcgcc ggtctcctcg atgaagccca
     3061 tgccgccgtg gacctgcacg ccgagcgagg cgacctcgac gccgatatcg ctcgaaaacg
     3121 ccttggcgac cggcgtgagc agcgaggcgc gggcatgcgc cgcctggcgc gtggccttgt
     3181 cggcgccgcg ctcggcgcga tcgagcgcca tcgcggtggc gtaacagatc gagcgcgccg
     3241 cctgggtgag cgcgcgcatg ctcatcagcg tgcgcttgat gtcggcatgg gcgatgatcg
     3301 gcgccgactc ggtcgccggc attcccgcgg tgcggccctg ccggcgctcg cgcgcgtagg
     3361 cgagcgcctg ctgcgtggcg cgttcggcga tgccgacgcc ttgcagcccg acgccgagcc
     3421 gcgcccggtt catcatggtg aacatgcagg ccatgccggc gttctcttcg ccgatgataa
     3481 aggccgtcgc ccctccgtgg tcgccgaaaa tcatcgtgca ggtcggcgag ccgtggatgc
     3541 cgagcttgtg ctcgaccgaa tgtgcgcgca ggtcgttgcg ggcgccgggc gtgccgtcgg
     3601 cgttgagcag aaatttgggg accacgaaca aggagatgcc gcgcgtgccc ggcggcgcgt
     3661 cgggcaggcg cgcgagcacg aagtggatga tgttgtcggt gaggtcgtgc tcgccgtagg
     3721 tgatgaagat cttctggccg gtgatgcgat aggtcccgcc ggcggcgcgc tcggcgcgcg
     3781 tgcgcaacgc gccgacgtcg gagccggcct gcggctcggt gagctgcatc gtggcgatcc
     3841 attcgccgga gacgagcttg ccgaggtagg cgcgcttgag cgactcgctg ccatgtgcgg
     3901 tgagcgcgtc gatggccgac atgctcacca gcggaccgac gccaaacgcc atggcggccg
     3961 cgttccacat ttcgacgcag gccgcgttga gcacgtgcgg cagcgcctgg ccgccccact
     4021 cggtttccgc cacgaggccg ttccagccgc cttgacgcca ggtcttgtaa gcctccttcc
     4081 agcccggggc ggtggtgacg gcgccgtcct tgaacgtgac gccctcgcgg tcgccgatgc
     4141 ggttgagcgg ggcaaggacc tcgccggc
//
LOCUS       DATMQB010000078         4596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1264887, whole genome shotgun sequence.
ACCESSION   DATMQB010000078 DATMQB010000000
VERSION     DATMQB010000078.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4596
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1264887"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1457)
                     /locus_tag="VNY79_02565"
     CDS             complement(<1..1457)
                     /locus_tag="VNY79_02565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71363.1"
                     /translation="MNLGVAFAPLVPLQILWAAIAAAVVLALLLIVSSSRGGAIRVVA
                     LLLIALALANPSLTREDRDPLSSVAVVVVDMSPSQNFGERTRQTEEARAAVLERLRRI
                     PGLDVRVVEAGQSDGETDGTRLFTALGAALADVPPDRVAGAVMITDGRVHDAPADANA
                     LGFAAPVHALVTGSKDERDRRVALIAAPRFGIVGQSQTITYRVEDQGATATTAEVTVR
                     RDGDVVQSRTVPVGAPQRIDIPIPHGGANIVEIEASPLAGELTQVNNRAVVAIDGVRD
                     KLRVLLVSGEPNAGERTWRNLLKSDASVDLVHFTILRPPEKQDGTPINELSLIAFPTR
                     ELFQQKIGEFQLIIFDRYARQGVLPIIYFDNITRYVRDGGAVLVAAGPDYASQTSIWR
                     TPLDAILPAEPSGNVTERAFHARLSELGKRHPVTRDLDGSESDPPHWAKWFRMVDTRN
                     NTGTPVMEGPDNKPLLILSRDGEGRVALLLSDQLWL"
     gene            complement(1468..4293)
                     /locus_tag="VNY79_02570"
     CDS             complement(1468..4293)
                     /locus_tag="VNY79_02570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4159 domain-containing protein"
                     /protein_id="HWX71364.1"
                     /translation="MIAGLPLGFAEPLVLIGLLTLPVLWWLLRLMPPRPRRIEFPPTR
                     LLLEIAPREETPARTPWWLTLIRLALAALVIIAAAGPMWNPPVATTKTRAPVAILIDD
                     GWAAAASWDARLRTADDIIARADNDRRAVALIPLSEGTRDISFATAAAARVRLHQIKP
                     KPHTVDRTEALPAITRFLGEAHDVEMVWLADGIDLGRGTDFVKSLAQALEQRPLTIVA
                     GGLAGARALTAIDNAAGALSVKVLRSAADAAETGTVRALDLKGLTLGEAPFALKAADR
                     ETEARFDLPVEIRNDIARVEIAGERSAGAVQLLDKRWRRRTVGIVSGATADTSQPLLS
                     SSYYIGRALGPFADVRLAQGESPAEAVTHFLDQNLPMLILADVGNVAGDAHDRLARWI
                     EDGGVLVRFAGPRLAASDDDLVPVKLRRGGRILGGSLSWDKPQPLAAFAHDSPFNGMN
                     TPNDVTVSRQVLAEPDAGLTENTWATLADGTPLVTAARRGKGLIVLFHVTGDTRWSDL
                     PLSGSFVEMLKRIVALAGTTHVAEAATGTAKTKAAREAAAPSRVLDGFGTFVPPPSTA
                     RPVPADFSGSATAEHPPGFYGAPENLLAVNTLAASDRLAPLDFTPLANAAREIYRRSE
                     PQDLRGPIFLAALAILALDTVIVLFLGGGIARLLPRASRAPATVVVAIAALALAHSLA
                     AAEDSPRGEVPRSALETKLAYVITGNGDVDAISKSGLSGLTLFLAQRTALEPGDPIGL
                     DITRDELAFYPLIYWPIVPGAAHPPEAALKRIDSYMKQGGTVLFDTRDAVVAPPGSGG
                     ETRSPGMLELRKILTSLDIPELEPVPREHVLTKTFYLLRDFPGRFNTGQLWVEALPAS
                     EDEETTRRPARGGDGVSSIIITSNDFAGAWATRPDGQPMLPMVEGEPRQRELSFRAGV
                     NIVMYTLTGNYKADQVHVPALLERLGQ"
     gene            complement(4290..>4596)
                     /locus_tag="VNY79_02575"
     CDS             complement(4290..>4596)
                     /locus_tag="VNY79_02575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HWX71365.1"
                     /translation="IVDPAEETFPYWGRVEFIEPEGGGRITAGRAETWRNDYAARVRR
                     HRAEIRSETDRLGWSFAIHRTDRPASELLLSLHVRIGTGLADGGTRTYASTEPRIPA"
BASE COUNT          697 a         1525 c         1696 g          678 t
ORIGIN      
        1 agccagagct ggtcggagag caggagcgcc acgcggccct cgccgtcgcg cgacaggatg
       61 agcagcggct tgttgtccgg gccctccatc accggcgtgc cggtgttgtt cctggtgtcg
      121 accatgcgga accatttggc ccaatgcggc ggatcgctct ccgacccgtc gaggtcgcgg
      181 gtcaccggat gacgtttgcc gagttcggag aggcgggcgt gaaaggcgcg ctcggtcacg
      241 ttgccgctcg gctccgccgg caggatggcg tcgagcggtg tacgccagat gctggtctgg
      301 ctcgcgtagt cggggccggc ggcgaccagc acggcgccgc cgtcgcgcac gtagcgcgtg
      361 atgttgtcga aatagatgat cggcagcacg ccctggcgcg catagcggtc gaagatgatg
      421 agctgaaatt cgccgatctt ctgctggaac agttcgcgcg tggggaaggc gatcagcgac
      481 aattcgttga tcggcgtgcc gtcttgcttc tccggcggac gcaggatggt gaagtgcacg
      541 agatcgacgg aagcgtcgga cttgagcaga ttgcgccagg tccgctcgcc ggcattcggc
      601 tcgccggaga ccagaagcac gcgcagcttg tcgcgcacgc cgtcgatcgc gacgacggca
      661 cggttgttga cctgggtgag ctcgccggcg agcggggaag cctcgatctc gacgatgttg
      721 gcgccgccgt gcgggatcgg gatgtcgatg cgctgcggcg cgccgaccgg gaccgtacgg
      781 ctctgcacga cgtcgccgtc ccggcgcacc gtgacctccg cggtggtcgc cgtcgcgccc
      841 tgatcctcga cccgataggt gatggtctgc gactggccga cgatcccgaa gcggggcgcg
      901 gcgatgaggg cgacgcggcg gtcgcgctca tccttgctgc cggtgacgag agcatgaacg
      961 ggcgcggcga agccgagcgc gttcgcgtcg gcaggcgcgt catgcacgcg cccgtcggta
     1021 atcatgacgg cgccggccac gcgatccggc ggcacgtcgg caagcgccgc gccgagcgcg
     1081 gtgaagagcc gcgtgccgtc ggtctcgccg tccgactgcc cggcctcgac cacgcgcacg
     1141 tcgagcccgg ggatgcggcg cagccgttcc agcaccgcgg cgcgcgcctc ctcggtctgc
     1201 cgcgtgcgct cgccgaaatt ctggctcggg ctcatgtcga ccacgacgac cgcgacggag
     1261 ctcagcgggt cgcggtcctc gcgggtgagc gacggattgg caagcgcgag tgcgatgagc
     1321 agcagcgcca ccacgcggat cgcgccgccg cggctgctcg agacgatcaa gagcagcgcc
     1381 agcacgacgg ccgcggcgat tgcggcccac aatatctgga gcgggacgag gggagcgaag
     1441 gcgacgccga gattcacgtc cgtcctccta ctgcccgagc cgttcgagca gcgccggcac
     1501 gtgcacctgg tcggccttgt agttgccggt cagcgtgtac ataacgatgt tgacgccggc
     1561 gcggaacgaa agctcgcgct gccgcggctc gccttcgacc atgggcagca tgggctggcc
     1621 gtcgggccgc gtcgcccacg cgccggcaaa atcgttcgaa gtaatgatga tcgaggatac
     1681 gccgtcgccg ccccgcgccg gacgacgcgt cgtctcttcg tcctcgctcg ccggcagcgc
     1741 ctcgacccag agctggccgg tattgaagcg cccggggaag tcgcgcaaca gatagaacgt
     1801 cttggtcaga acgtgctcgc gcggcaccgg ctcgagctcg gggatgtcaa gcgaggtgag
     1861 gatcttgcgc agttcgagca tgcccgggct gcgggtctcg ccaccggagc caggaggcgc
     1921 gacgaccgcg tcacgcgtgt caaacagaac ggtgccgccc tgcttcatgt aggaatcgat
     1981 gcgtttgagc gccgcttccg gcgggtgcgc ggcgccgggc acgatcggcc agtagatcag
     2041 cggatagaac gcaagctcat cgcgcgtgat gtcgagcccg atcgggtctc ccggctcaag
     2101 cgcggtgcgt tgcgcgagaa acagcgtgag gccggaaagg ccggacttgc tgatcgcatc
     2161 gacgtcgccg ttgccggtga tcacgtaggc aagcttggtc tccagtgccg agcgcggcac
     2221 ttcgccgcgc ggcgaatctt cggcggccgc caagctgtgc gcgagggcga gcgctgcaat
     2281 cgccaccacg accgtggccg gcgcccgcga agcgcgcggc aggaggcgcg cgatgccgcc
     2341 gccgaggaac agcacgatta cggtgtcgag cgcgaggatc gcgagcgcgg cgaggaagat
     2401 cggcccgcgt aaatcctgcg gctcgctgcg gcgatagatt tcgcgggcgg cattggcgag
     2461 gggggtgaaa tcgaggggcg ccaggcggtc gctggcggcg agcgtattca cggcgaggag
     2521 gttttccggc gcgccataaa aacccggcgg gtgctcggcg gtggcgctgc cggaaaagtc
     2581 cgccggcacc ggccgcgccg tcgagggcgg cggcacgaaa gtcccgaagc cgtcgagtac
     2641 gcggctcggc gcggccgctt cgcgcgcggc cttcgtcttc gccgtgcccg tggcagcctc
     2701 ggcgacgtga gtggtgcccg cgagcgcaac gatgcgcttg agcatctcca cgaagctgcc
     2761 cgacagcggc agatccgacc agcgggtatc gccggtgacg tggaagagca cgatcaagcc
     2821 cttgccgcgg cgggcggcgg tgacgagcgg cgtgccatcg gcgagcgtcg cccaggtgtt
     2881 ctcggtcagc cccgcatcgg gctccgccag cacctgccgg ctgacggtca cgtcgttcgg
     2941 cgtattcatg ccgttgaatg ggctgtcatg cgcgaaggcg gcgagtggct gtggcttgtc
     3001 ccagctcagg ctgccgccga ggatgcggcc gccgcgccgc agcttgaccg gcacgagatc
     3061 gtcgtcggac gcggcgagcc gcggcccggc gaaacgcacc agcacgccgc cgtcctcgat
     3121 ccagcgcgcg agccggtcgt gcgcatcgcc ggcgacgttg ccgacgtctg cgaggatgag
     3181 catcggcagg ttctggtcga gaaaatgcgt caccgcttcc gccggcgact cgccttgcgc
     3241 aagccgcaca tcggcgaacg ggccgagcgc gcgcccgatg tagtagctcg aggacaacag
     3301 cggctgcgac gtatcggcgg tcgcgcccga gacgatgccg acggtgcggc gcctccagcg
     3361 tttgtcgagg agctgcaccg cgccggcaga gcgctcgccg gcaatctcga cgcgcgcaat
     3421 atcgttgcga atttcgaccg gcagatcgaa ccgcgcctcg gtctcgcggt ccgctgcctt
     3481 gagcgcgaac ggcgcctcgc cgagcgtgag gcccttgaga tcgagcgcgc gcacggtgcc
     3541 ggtctccgcc gcgtccgcag ccgaacgcag caccttcacg ctgagcgcgc cggcggcgtt
     3601 gtcgatggcg gtgagggcgc gagcaccggc caggccgccg gcgacgatgg tgagcgggcg
     3661 ctgctcgagc gcctgcgcga ggcttttgac gaaatcggtg ccgcggccga gatcgatgcc
     3721 gtcggcgagc cacaccattt ccacatcgtg cgcttcgccg aggaagcgcg tgatcgccgg
     3781 caaggcctcg gtacggtcga ccgtgtgcgg cttgggtttg atctggtgca ggcgcacgcg
     3841 cgccgccgcc gccgtggcga atgaaatgtc gcgggtcccc tcggagagcg gaatgagcgc
     3901 cacggcgcgg cggtcgttgt cagcccgcgc gatgatgtcg tcggcggtgc gcaggcgcgc
     3961 gtcccagctc gcggcagcgg cccagccgtc gtcgatcagg atcgcgaccg gcgcgcgcgt
     4021 cttcgtcgtc gccaccggcg gattccacat tggaccggcg gcggcgatga tgaccagcgc
     4081 cgccagcgcc agccgtatga gcgtgagcca ccacggcgtg cgcgccggcg tttcctcccg
     4141 cggcgcgatt tccagaagga gccgggtcgg cgggaactcg atgcggcgcg ggcgcggcgg
     4201 catcaggcgc agcagccacc atagcaccgg cagggtgagc agaccaatga gcaccagcgg
     4261 ttcggcaaag ccgagcggca acccagcgat catgccggta tcctcggctc ggtcgacgcg
     4321 taggtacgcg ttccgccgtc ggcgaggccg gtgccgatgc gcacgtgcag cgacagcagc
     4381 agttcgctcg ccggccggtc ggtgcggtgg atggcgaagc tccagccgag ccggtcggtc
     4441 tcgctgcgga tttcggcgcg gtggcggcgc acgcgtgcgg cgtagtcgtt ccgccaagtc
     4501 tcggcacggc cggcggtgat gcggccgccg ccttccggct cgatgaactc gacgcggccc
     4561 caatacggga atgtctcctc ggcgggatcg acgatc
//
LOCUS       DATMQB010000079         2805 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1572536, whole genome shotgun sequence.
ACCESSION   DATMQB010000079 DATMQB010000000
VERSION     DATMQB010000079.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2805)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2805)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2805
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1572536"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1083
                     /locus_tag="VNY79_02580"
     CDS             <1..1083
                     /locus_tag="VNY79_02580"
                     /inference="COORDINATES: protein motif:HMM:TIGR01470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HWX71366.1"
                     /translation="HSEFGAMRFLPVFLDLAQGAVGLAGSGPAAQSKLRLLRSAGARV
                     RWFAEGAGAIDGDLAADLHSGGVEMSRADPRQADFSGLIAVVSAIGDARDDDLAAQAR
                     RQRIPVNVVDRPDLSTFIFPAIVDRGEVVVAIGTGGAAPVLARRLRERIEALLPARIG
                     DLAALMGRFRAAAARKRRGADSLRQFWERVVDGPIGAAALAGRWHEAETALARASERP
                     GDWHGHSGAVFLVGAGPGDPDLLTLRALQALQAADVVLYDETVSEGILDRARRDAERI
                     FAGRRAGGPGIGQDAINRRLADAARQGRNAVHLKGGDPFSFARGGEEIDYLRHAGVAI
                     VVVPGVTATLARAAVAALPPASEIAA"
     gene            1080..1394
                     /locus_tag="VNY79_02585"
     CDS             1080..1394
                     /locus_tag="VNY79_02585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2849 domain-containing protein"
                     /protein_id="HWX71367.1"
                     /translation="MTSPLQQKLKITGPVVVTANRLSDGAVVYRRVDGDWATALADAT
                     VTTSAAVAQELLAAAKSDRLRAVDPYVAPVKVAAGGRVHPGNLRESIRSAGPTIELPA
                     TG"
     gene            1409..>2805
                     /locus_tag="VNY79_02590"
     CDS             1409..>2805
                     /locus_tag="VNY79_02590"
                     /EC_number="1.8.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0050311 - sulfite reductase (ferredoxin)
                     activity [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrite/sulfite reductase"
                     /protein_id="HWX71368.1"
                     /translation="MYLYDELDRTLVAERVGEFRDQVARRLSGELTEDEFKPLRLMNG
                     VYLQLHAYMLRISIPYGTLSSEQLRMLAHVARRYDRGYGHFTTRQNVQFHWIKLEELP
                     EAMADLASVGMHGMQTSGNNVRNITTDQWAGVATDEIEDPRVWAEVIRQHVTLHPEFS
                     FMPRKFKIAVGASAHDRAALRIHDMALRLHRNGAGEAGFEVMVGGGLGRTPFLAKTIK
                     LFLPQRDVLSYVEAVLRTYNQFGRRDNAWKARIKILVHDLGVEAFAKEVEAEWQSMKD
                     GALALDPAVFAEIAARFRYPAYERLEDGPPALAQARRADRRFDSWMGNAVANHKVPGY
                     AIVTLSLKPQGGTPGDATAEQMHAIADLAERYSHGEIRVGHEQNLVLPHVAQRDLAAL
                     WRALDGLGLATPNVGLVSDIIACPGLDYCSLANTRSIPVAQEIASRFRNLDVARDLGR
                     LHINISGCINACGHH"
BASE COUNT          416 a          995 c          954 g          440 t
ORIGIN      
        1 cattcggaat ttggcgcgat gcgttttttg ccggtgttcc tcgatctcgc ccagggggcg
       61 gtcggcctgg ccggcagcgg ccccgccgcg caaagcaagt tgcggctgtt gcggtcggcg
      121 ggcgcccgcg tgcgctggtt cgccgaaggc gcgggcgcca tcgacggcga tttagcggct
      181 gacctgcatt ccgggggcgt tgagatgtcg cgtgccgacc cgcggcaagc ggatttctct
      241 ggcctcatcg ccgtcgtgtc ggccatcggc gatgcgcgcg acgatgacct cgccgcgcag
      301 gcgcgccggc aacgaattcc ggtcaacgtc gtcgaccggc ccgatttatc gactttcatc
      361 tttccggcca ttgtcgatcg cggcgaggtc gtggtggcga tcggcaccgg cggcgctgcg
      421 ccggtgctgg cgcggcggct gcgggagcgc atcgaagcgc tgctgccggc gcgcatcggc
      481 gacctcgcgg ccttgatggg tcgttttcga gccgccgccg cgcggaagcg gcgcggcgcg
      541 gactcgctgc ggcaattctg ggagcgcgtc gtcgacggac cgatcggcgc ggcggcgctc
      601 gccggacgct ggcacgaagc cgagaccgcg ctcgcgcgcg ccagcgagcg gcccggcgat
      661 tggcacggcc attccggggc ggtctttctg gtaggcgccg gcccgggcga ccccgatttg
      721 ctgaccttgc gggcgttgca ggcactgcag gccgccgatg tcgtcctcta cgatgagacg
      781 gtcagcgagg gaatcctcga tcgcgcccgc cgcgacgccg agcgcatctt cgccggccgg
      841 cgcgccggtg gccccgggat cggtcaggac gcgatcaacc ggcgtctggc cgatgcggcg
      901 cggcagggac gcaacgccgt ccacctcaaa ggcggcgatc ctttcagctt cgcccgcggc
      961 ggcgaggaga tcgactatct ccgccacgcc ggcgtcgcca tcgtcgtcgt gcctggggtg
     1021 accgcgaccc tcgcgcgcgc tgcagtcgcg gcactgccgc cggcatcgga gatcgcggca
     1081 tgacctcgcc actgcagcag aagctcaaga tcaccggacc ggtggtggtg accgccaacc
     1141 gtctaagtga cggcgccgtg gtctaccgtc gcgtcgacgg cgactgggcg accgcactcg
     1201 ccgacgcgac tgtcacgact tcggcggcgg tcgcgcaaga actgctggct gccgccaaga
     1261 gtgatcggct gcgcgccgtc gacccctacg tcgccccggt caaggtcgcg gcgggcggtc
     1321 gcgtgcaccc cggcaacctg cgcgagtcga tccgctccgc cggcccgacc atcgaactgc
     1381 ccgccaccgg ctgaggacaa gggcgcccat gtacctctac gacgagctgg accggacgct
     1441 ggtcgccgaa cgcgtcgggg aattccgcga tcaggtcgcg cgtcggcttt ccggcgagtt
     1501 gaccgaagat gaattcaagc cgctgcggct gatgaacggc gtctatctcc agctccacgc
     1561 ctacatgctg cgcatctcca ttccctacgg cacgttgtcg tcggaacagc tgcgcatgct
     1621 ggcccacgtc gcgcggcgct acgaccgcgg ttacggccat ttcaccacgc ggcagaacgt
     1681 ccagttccac tggatcaagc ttgaggagct gcccgaggcc atggccgatc tcgccagcgt
     1741 cggcatgcac ggcatgcaga ccagcggcaa caatgttcgc aacatcacga ccgatcagtg
     1801 ggccggcgtg gcgacggacg agatcgagga tccgcgcgtc tgggccgagg tgatccgcca
     1861 gcacgtgacg ctgcatcccg aattctcgtt catgccgcgc aagttcaaga tcgcggtagg
     1921 ggcgtcggcg cacgaccgcg ccgcgctgcg cattcacgac atggcgctgc ggctgcatcg
     1981 caacggcgcc ggcgaggccg gtttcgaggt catggtcggc ggcggcctcg gccgtacgcc
     2041 gtttctcgcc aagacgatca agctgttcct gccgcagcgc gacgtgctga gctatgtcga
     2101 ggcggtgctg cgcacctaca accagttcgg acggcgcgac aacgcctgga aggcgcgcat
     2161 caagatcctg gtgcacgacc tcggcgtcga agcgttcgcc aaggaagtcg aggcggaatg
     2221 gcagagcatg aaggacggcg cgctggcgct cgatcccgcg gtgttcgccg agatcgccgc
     2281 ccgcttccgc tacccggcct acgagcggct cgaggacggc ccgcccgcgc tggcgcaggc
     2341 gcgccgcgcc gatcgccggt tcgattcctg gatgggcaac gccgtcgcca atcacaaggt
     2401 gccgggctac gccatcgtca cgctgtcgct caagccgcaa ggcggcacgc ctggcgacgc
     2461 caccgccgag cagatgcacg cgatcgccga tctcgccgag cgctactccc atggcgagat
     2521 tcgcgtcggc cacgaacaga atctcgtcct gccccatgtc gcgcagcgcg accttgcggc
     2581 gctgtggcgc gcgctcgatg ggctcggcct cgccacgccc aatgtcgggc tcgtctccga
     2641 catcatcgcc tgccccggcc tcgactactg cagcctcgcc aatacgcgct cgatcccggt
     2701 cgcgcaggag atcgccagcc gcttccgcaa cctcgacgtg gcgcgcgatc tcggccggct
     2761 gcacatcaac atctccggct gcatcaacgc ctgcggccat catca
//
LOCUS       DATMQB010000080         2299 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1266522, whole genome shotgun sequence.
ACCESSION   DATMQB010000080 DATMQB010000000
VERSION     DATMQB010000080.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2299)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2299)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2299
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1266522"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1065)
                     /locus_tag="VNY79_02595"
     CDS             complement(<1..1065)
                     /locus_tag="VNY79_02595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX71369.1"
                     /translation="MQLVLERRAERSAIIAIASPLIAIALTLVTVAVLFEIMGKSPIT
                     ALSVYFIEPLTDPFSLQEIAVKATPLVMIAIGLSLCYIANIWNIGAEGQFIVGAVCGS
                     WLAVRTNGTGIGPWVLPVMLLLGALGGALYGLIPALCRVYFGASEILTSLMLVYVGNL
                     GMDYLVRGPWRDPHGLNFPTTAEFDRVATVPTLFVGAGRLHAGSVIALVVVMLATVLL
                     GRMIMGFEIRLVGAAPKAARFSGFSTDRLVLFTFAVSGALAGLAGIIEVAGPIGHLDP
                     GLSSGYGFTAIIVAFLGRLNPIGILFAGLFLALTFIGGETAQITMKVSPDFTKVFQGI
                     LLFYVLACDSLIIYRVRLIQS"
     gene            complement(1049..>2299)
                     /locus_tag="VNY79_02600"
     CDS             complement(1049..>2299)
                     /locus_tag="VNY79_02600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HWX71370.1"
                     /translation="VALGLPSTESFAAIVETLAETARIYGLPLHPHREVWQLSVGERQ
                     RIEIVRTLMQNPKLLILDEPTAVLTPQEAEQLFIVLDRLRDEGRAVLYISHKLEEVKR
                     LCNTATILRAGKKVAACDPRRETAASLARMMVGAEIGEVKMASASAASAPRLVVHKLS
                     LEPDDPHGTRLNDVSLAVTGGEIVGIAGVAGNGQDELFAALTGERLSPEPGAVMIDGA
                     AVGTLGVTARRRLGAAFVPEERLGHGAAPRMKLSENALLTGHAASGMVKYGFIDNAAM
                     LAAVDRTTKAFDVRKAKRDPEAASLSGGNLQKFVVGREILREPGILVVSQPTWGVDAG
                     AAATIRQALIDLAGRGAAVLVISQDLDEIEEIADRVAVMFRGNLSAPLRAAEATREAL
                     GLLMGGAAADAPQGRRETQHAVGA"
BASE COUNT          399 a          753 c          790 g          357 t
ORIGIN      
        1 ggactggatg aggcggacgc gatagatgat cagcgagtcg caggcgagca cgtagaacag
       61 caggatgccc tggaagacct tggtgaagtc gggcgagacc ttcatcgtga tctgcgcggt
      121 ctcgccgccg atgaaagtca gcgccaggaa cagtccggcg aagaggatgc cgattggatt
      181 gagcctgccg aggaaggcga cgatgatggc ggtgaagccg tatcccgacg agaggccggg
      241 atcgagatgg ccgatgggcc ccgccacctc gatgattccg gcgagcccgg cgagcgcgcc
      301 cgagaccgcg aacgtgaaca gcaccaggcg atcggtgctg aagccggaaa agcgcgcggc
      361 cttcggtgcg gcgccgacca gccttatttc aaatcccatg atcatgcggc cgagcaggac
      421 ggtcgccagc atgacgacga cgagcgcgat caccgagccg gcgtgcaggc ggccggcgcc
      481 gacgaacagg gtcggcaccg tggcgacccg gtcgaactct gcggtggtcg ggaagttgag
      541 gccgtgcgga tcgcgccagg gtccgcgcac caggtagtcc atgccgagat tgccgacata
      601 caccagcatc aggctggtca ggatctcgct cgcgccgaaa tacacccggc acagcgccgg
      661 gatcagcccg tagagcgcgc cgccgagcgc gccgagcagc aacatcaccg gcaggaccca
      721 ggggccgatc ccggtgccgt tggtgcgcac ggcaagccag cttccgcaca ccgcgccgac
      781 gatgaattgt ccctcggcgc cgatgttcca gatgttggcg atgtagcaga gcgacaatcc
      841 gatcgcgatc atcaccagcg gcgtcgcctt gacggcaatc tcctgcagcg agaacgggtc
      901 ggtcagcggc tcgatgaagt agaccgacag tgccgtgatc gggctcttgc ccatgatctc
      961 gaacaacacc gcgacggtga cgagcgtaag cgcgatcgcg atcagcggcg aggcgatggc
     1021 gatgatcgcg gagcgttccg cgcgccgctc aagcaccaac tgcatgctgt gtctctcgcc
     1081 tgccttgggg cgcatcggcg gcggccccgc ccatcagcag tcccagcgct tcccgcgttg
     1141 cttccgcggc gcgaagcggc gccgaaagat tgccgcgaaa catgaccgcg acgcgatcgg
     1201 cgatctcttc gatttcgtcg aggtcctggc tgatgaccag cactgcagcg ccgcggccgg
     1261 cgagatcgat cagcgcctga cgaatggtcg ctgccgcgcc ggcgtcgacc ccccaggtcg
     1321 gctggctgac gacaaggatg cccggttcgc gcaggatttc gcggccgacc acgaatttct
     1381 gcaggttgcc gccggagagg ctcgcggctt ctggatcgcg cttggccttg cgcacgtcga
     1441 aggccttggt cgtgcgatcg acggcggcga gcatcgccgc attgtcgatg aagccgtact
     1501 tgaccatgcc gcttgcggca tggccggtga gcagcgcgtt ttccgacaat ttcatccgcg
     1561 gcgccgcgcc atggccgaga cgttcctcgg gaacgaaggc tgctcctagg cgccgccgcg
     1621 cggtcacgcc aagcgtgccg accgccgcgc cgtcgatcat gacggcgccc ggctcaggcg
     1681 acaggcgttc gccggtcagg gcggcgaaca gctcgtcctg cccgttgccg gcgacgccgg
     1741 cgatgccgac gatctcgccg cccgtcaccg cgagcgagac gtcgttgagt cgcgtgccgt
     1801 gcggatcgtc gggttcgagc gaaagcttgt ggacgacgag ccgcggcgcc gacgccgcgg
     1861 atgcggaggc catcttcact tcgccgatct cggctccgac catcatgcgg gcaagcgagg
     1921 cggccgtctc gcggcgcgga tcgcatgccg ccaccttctt gccggcgcgc aggatcgtcg
     1981 ccgtattgca gagccgcttc acctcttcga gcttgtggct gatgtagagg accgcccgtc
     2041 cttcgtcccg gagccggtcg agcacaatga aaagctgctc cgcctcctgc ggcgtcagga
     2101 cggcggtcgg ctcgtcgagg atcagcagct ttggattttg catgagcgtg cgcacgatct
     2161 cgatgcgttg gcgctccccg accgacagct gccagacttc ccgatgggga tgcagcggca
     2221 gcccgtagat gcgcgcggtc tctgcgagcg tctccacgat ggcggcaaag gattcggtgg
     2281 acggcaggcc gagcgcgac
//
LOCUS       DATMQB010000081        22223 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1574515, whole genome shotgun sequence.
ACCESSION   DATMQB010000081 DATMQB010000000
VERSION     DATMQB010000081.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 22223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22223
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1574515"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..319
                     /locus_tag="VNY79_02605"
     CDS             <1..319
                     /locus_tag="VNY79_02605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004478 - methionine adenosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006556 - S-adenosylmethionine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="methionine adenosyltransferase domain-containing
                     protein"
                     /protein_id="HWX71371.1"
                     /translation="AKNVVAAGLADSCTIQIAYAIGVADPMSVYVDTHGTGKVEEAKL
                     QKLLPEVFPLQPTAIRRALKLNRPIYRRTAAYGHFGRAPEKDGGFSWERTDLADTLKR
                     GLR"
     gene            complement(335..670)
                     /locus_tag="VNY79_02610"
     CDS             complement(335..670)
                     /locus_tag="VNY79_02610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HWX71372.1"
                     /translation="MSWETMMPSRRLIERTPERPSIRPSELSAADRACIERLVGHTLA
                     RVEREFILQTLRDNQGNRTRSARLLAISIRSLRDKIRSYRNQGESVPEPASSPLQYTA
                     GRRANGFRH"
     gene            953..1174
                     /locus_tag="VNY79_02615"
     CDS             953..1174
                     /locus_tag="VNY79_02615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71373.1"
                     /translation="MKAILGCAALALAVTAATVSADAKGCIKGAIVGGVAGHVAGHHG
                     VLGAAAGCIVGHHEATKHEKALQSSHEQR"
     gene            1292..1984
                     /gene="trmB"
                     /locus_tag="VNY79_02620"
     CDS             1292..1984
                     /gene="trmB"
                     /locus_tag="VNY79_02620"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008176 - tRNA
                     (guanine(46)-N7)-methyltransferase activity [Evidence
                     IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HWX71374.1"
                     /translation="MDVELNRARTFFGRRKGHKLRKRQAELFDTLLPRLAIDLSGPAP
                     TELRTLFPVPVTGIELEIGFGGGESMIAQALARPGTGFIGIEPFANGMAKALAAIERE
                     SLPNVRLHFEEAASLIAWLPDGSMGRVDLIHPDPWPKRRHWKRRFVQDATVTQLARIL
                     RRGGELRFATDVADYAAWTLQRLLRSTAFDWTAQSADDWRKPWPGFMTTRYHAKAARE
                     ERLSCFLIFRRV"
     gene            complement(2232..3005)
                     /locus_tag="VNY79_02625"
     CDS             complement(2232..3005)
                     /locus_tag="VNY79_02625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71375.1"
                     /translation="MENPLFIGLVVFAVILAGAFAGWTARQCLPAHHVTDETKNLVSM
                     SMAVVATISALVLGLLISNANNLFIARGGEVTALSAEILRLDRILRRYGSQTEPARET
                     LRRYAERKSADLFPEHLADVDLGNSSTYELLQQLEDSLLALNPADPRDRWWLGQAMTL
                     AAKIGDTGWLLAQQVGQGTPKAFVALLVFWLTLLFASFGLFAPRNFTSVMILTLCALA
                     VGGAIAMLLELEKGFGGLIHNSPQPMLQVVKALEARPNK"
     gene            complement(3259..4620)
                     /locus_tag="VNY79_02630"
                     /pseudo
     CDS             complement(3259..4620)
                     /locus_tag="VNY79_02630"
                     /inference="COORDINATES: protein motif:HMM:NF021603.4"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2336 domain-containing protein"
     gene            4650..5336
                     /gene="rimP"
                     /locus_tag="VNY79_02635"
     CDS             4650..5336
                     /gene="rimP"
                     /locus_tag="VNY79_02635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HWX71376.1"
                     /translation="MDESLMTFADEPRLITEPGRAARVALIAAPALAALGYRLVRVRI
                     SGAAGQTVQIMAERPDGTMTIEDCELASRTLSPVLDVADPIEGPYRLEISSPGIDRPL
                     VRRSDFDRYAGHVAHVEMLVLVNGRRRFRGELAGTDGDCVRLRRSDAAAGEPLEVLLR
                     IDDMMEARLVLTDALIAESLRRSKQEERAARARGRRDENNNPEPHRPDQTNTNTVPAQ
                     ARRARTAQGE"
     gene            5340..6944
                     /gene="nusA"
                     /locus_tag="VNY79_02640"
     CDS             5340..6944
                     /gene="nusA"
                     /locus_tag="VNY79_02640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006353 - DNA-templated transcription
                     termination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor NusA"
                     /protein_id="HWX71377.1"
                     /translation="MATVSANKLELLQIADAVAREKAIDRKIVLGAMEDAIAKAARSR
                     YGSETDVHAEIDPKSGELHLSRHMLVVEAVENPASQITLDDARRHHPAAQIGDTISDK
                     LPPLEYGRIAAQSAKQVIVQKVREAERDRQYEEYKDRIGDIVNGIVKRVEYGNVVVDL
                     GRGEAIVRRDEMLPREVFRNGDRIRAYIYDVRREQRGPQIFLSRTHPQFMSKLFAQEV
                     PEIYDGIVEVKAVARDPGSRAKIAVVSRDSSVDPVGACVGMRGSRVQAVVNELQGEKI
                     DIIPWSHDIATFVVNALAPAEVAKVVLDEERERIEVVVPDQQLSLAIGRRGQNVRLAS
                     QLTGWDIDILTEQEESERRQAEFENRTRIFIDALNVDEVVGQLLASEGFNSVEELALV
                     DAKEIAGIEGFDNDTALELQTRARDYLAKIEAEFDAKRRVLGVEDAVKDVPGVTTAML
                     VRFGENGIKTVEDLAGCATDDLAGWTERKDGETVREPGILDGFELSREDAEALVMQAR
                     LKAGWVAEADLAPPAVEEAPLPEAQA"
     gene            6976..7665
                     /locus_tag="VNY79_02645"
     CDS             6976..7665
                     /locus_tag="VNY79_02645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HWX71378.1"
                     /translation="MDAARDIELDTGPRAPERERLCVATRTVRPVSELIRFVIGPEGE
                     PVPDLKRKLPGRGIWVTATNGALGEAIKRKAFSRSFKREIRLPADLVARTERLLERAV
                     IDALAIAGKAGLVAAGFGKTAAALEHEKVAGLLHAAEAASDGIRKLDALMRRRFSGKA
                     PAVVRFLTSAQLDLALSRPNVIHAALLAGPASETVLARCRRLERFRTGDPPPKAAEAA
                     PDLAGEGTERV"
     gene            7678..10272
                     /gene="infB"
                     /locus_tag="VNY79_02650"
     CDS             7678..10272
                     /gene="infB"
                     /locus_tag="VNY79_02650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HWX71379.1"
                     /translation="MTETIKNAGEKLSVTSTKTLTLKRGGVEQGVVRQSFSHGRSKAV
                     VVEKVKRRIAGPGEAKPEAVAPAARGAVPKRGIVTAKSPATAPSATPAPGTAAPSPKP
                     SGVVLRTLTDEERSARAHALADARLREAEERKIAEEEARIRQSREEVERSERAKAEAR
                     KRDEEERRKHDEETKRKADEVAKKRFGADTATAAKPGARPALEADEEEAPRSIRRGSA
                     APRPTPAPKPTRTAAEKRRGRLTVVTALSADEERERSVAAFRRRVQRMTGHRDSEPKE
                     KIVREVTIPETITIQELANRMAERAVDVVRLLMKQGHMAKITDTIDADTAQLLAEELG
                     HTVRRVSEADVEEGMFDAADDPASLLPRAPVVTIMGHVDHGKTSLLDAIRSTDVAAAE
                     AGGITQHIGAYQVTSPSGGRITFIDTPGHAAFTAMRARGAKITDIVVLVVAADDGVMP
                     QTVEAIHHAKAAKVPIIVAINKVDKPDAKPERVRTELLQHEIQVESLGGDVLELEVSA
                     KQKLNLDKLLDMIALQAEVLELKANPNRAAEGTVIEARLDRGRGPVATVLVQRGTLKP
                     GDIVVAGSEWGRVRALASDTGHPVIAAGPSMPVEVLGFNGTPEASDRLGVVHSEARAR
                     EIADYRARQKREKMAARQTGMRGSLEQMMNQLKATGRKEFPLLIKGDVQGSVEAIVGA
                     LEKLSTDEVAARIIFAGVGGITESDVTLAEASGTAVIGFNVRAHKEAREAAEHAGIEI
                     RYYNIIYDLVDDVKKAMSGLLAPTLRETMLGNATILEIFKVSKVGNVAGCRVTDGVVE
                     RGANVRLIRDNVVVHQGKLSQLKRFKDDAREVVAGQECGMAFENYHDMKVGDVIECYR
                     VESVQRTL"
     gene            10406..10816
                     /gene="rbfA"
                     /locus_tag="VNY79_02655"
     CDS             10406..10816
                     /gene="rbfA"
                     /locus_tag="VNY79_02655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HWX71380.1"
                     /translation="MPRHHHREQSAGGSQRQLRVGELIRHEVAEMLSRGDVHDPVIEA
                     HMITVPEVRMSADLRLATIYVMPLGGRNEEDVLDALERNKRYMRGEIARRVNLKFAPE
                     IRFRIDERFDEAERIEKLLRTPEVRRDLAGEKDE"
     gene            10876..11850
                     /gene="truB"
                     /locus_tag="VNY79_02660"
     CDS             10876..11850
                     /gene="truB"
                     /locus_tag="VNY79_02660"
                     /EC_number="5.4.99.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004730 - pseudouridylate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HWX71381.1"
                     /translation="MEERAKQKKRHKRDVHGWIVLDKPVGMTSTHAVSVIKHLFTAKR
                     AGHAGTLDPLASGCLPVALGEATKTVPFVVDSRKAYVFTICWGEERDTDDAEGRVTAT
                     SEVRPDAAAIRALLPRFTGTIEQVPPRFSAIKIAGERAYDLAREGETVEIAPRAVTVH
                     RLELAETPGPGHAVLTAECGKGTYVRALARDLGRMLGTFGHVCALRRSRVGPFGEREM
                     ISLERLESLCHRAAAGEGHLADILLPIETALDDIPALAVSPADAARLHRGQAVLLRGR
                     DAAVFRGMVQVASGGQVVAIAEVDRGEIVPRRVFNLAGIAGRAGRREG"
     gene            11856..12125
                     /gene="rpsO"
                     /locus_tag="VNY79_02665"
     CDS             11856..12125
                     /gene="rpsO"
                     /locus_tag="VNY79_02665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HWX71382.1"
                     /translation="MSITTARKAEVIKTYGAKSSDTGSPEVQVALLSERINNLTDHFK
                     THIKDNHSRRGLLKLVSQRRQILDYLRRTNEGRYKELIERLGIRR"
     gene            12373..14547
                     /gene="pnp"
                     /locus_tag="VNY79_02670"
     CDS             12373..14547
                     /gene="pnp"
                     /locus_tag="VNY79_02670"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004654 - polyribonucleotide
                     nucleotidyltransferase activity [Evidence IEA];
                     GO_process: GO:0006402 - mRNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HWX71383.1"
                     /translation="MFDIHRVQLDWGGRKLTLETGRMARQADGAVLATYGDTSVIATV
                     VAAKQPKEGIDFLPLTVNYQEKFYAAGRIPGGYFKREGRPTEKETLTSRLIDRPLRPL
                     FADGWRCDTQVIITTLSHDLENDPDIVALVAASAALTLSGAPFMGPVGGARVGFINNE
                     YVLNPQIDEMTESGLDLVVAGTQDAVLMVESEAKELTEEIMLGGVMFGHRHFQPVIEA
                     IIRLAEKAAKEPRELTLPENAALENEMRALVEQDLRAAYAIPEKTARHKAIDAVKERV
                     LGHFSPQGAESAKYPPLQVAGVFKELEGKIVRWNILDTGTRIDGRNVKTVRPIVCEVG
                     VLPRTHGSALFTRGETQALVVATLGTGEDEQFVDALQGTYKETFLLHYNFPPFSVGET
                     GRIGAPGRREIGHGKLAWRSIHPVLPAHLEFPYTLRVVSEITESNGSSSMATVCGTSL
                     ALMDAGVPLKRPTAGIAMGLILEDKRFAVLSDILGDEDHLGDMDFKVAGTERGVTSLQ
                     MDIKISGITEEIMRIALAQAQEGRMHILTEMGKAITRHRAELGEHAPRIEVFSIPVDK
                     IREVIGSGGKVIREIVEKTGAKIDISDDGTVKVASAKAESIKAALNWIKSITSEPEVG
                     QVYEGTVVKVMDFGAFVNFFGAKDGLVHISQLAPRRVQKTTDVVKEGDKVKVKLLGFD
                     ERGKVRLSMKVVDQESGEDLEAKQKAEGEQGREAAAAGGAAE"
     gene            complement(14974..15534)
                     /locus_tag="VNY79_02675"
     CDS             complement(14974..15534)
                     /locus_tag="VNY79_02675"
                     /EC_number="3.1.1.106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetyl-ADP-ribose deacetylase"
                     /protein_id="HWX71384.1"
                     /translation="MAEAKPLITAEVGAARLEVCVADITTLKLDAIVNAANHTLLGGG
                     GVDGAIHRAAGPELLAECRTLGGCATGSAKITRGYRLPARHVIHAVGPVWSRGRKGED
                     DLLASCYRTALDLAAAHKLASIAFPAISTGVYRFPADRAARIAVGTVAAEVAASARGI
                     ERVVFCCFAPDAADHYGASFTELGLA"
     gene            complement(15548..16642)
                     /locus_tag="VNY79_02680"
     CDS             complement(15548..16642)
                     /locus_tag="VNY79_02680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="patatin-like phospholipase family protein"
                     /protein_id="HWX71385.1"
                     /translation="MKKLLSSLLPGAAADARGAQKTKRVNLALQGGGAHGAFTWGVLD
                     HLLSDERLSVEGISGTSAGAVNAALLADGLVRGGRAEAQKRLADFWRAASSNGNLPAL
                     QRAVMERLLSFMPLEGTPIQAWFDALSRYFSPYDVNPLNINPLKDLIERFVDFEALRA
                     CSDLQIFVSATNVQTGRVRIFPREKITADAVMASACLPLLFRAVEIDGVPYWDGGYLG
                     NPVIFPFFRTTTTEDVLVVQINPLVRERTPTSAPEIMNRINEITFNSSLIGEYRAIDF
                     VARLIDQGRLPRGTGPGQYRRINVHRILLEPVGTHFDSVGKMSTDYDYFEMLRLNGKR
                     AARRFLDDHFDDIGVRSTVDLRAEAQAEWA"
     gene            complement(16782..17564)
                     /locus_tag="VNY79_02685"
     CDS             complement(16782..17564)
                     /locus_tag="VNY79_02685"
                     /EC_number="1.1.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003858 - 3-hydroxybutyrate dehydrogenase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxybutyrate dehydrogenase"
                     /protein_id="HWX71386.1"
                     /translation="MLKGKTALVTGSTSGIGLAVARALAAEGANVTINGFGDKAAIEQ
                     ERSGIEKEYAVKALYSPADMTKPAEIAEMVRTTAQTFGSLDVLVNNAGIQHVAPIEEF
                     PVEKWDQIIAINLSSAFHTIRAALPGMKARKWGRIINTASAHSLVASPFKVAYVSAKH
                     GLAGLTKTVALEAATFGITVNAISPGYVWTPLVEKQIPDTMKARGLTEEQVKRDVLLA
                     AQPTKEFVAVGEIAALAVYLCSDAAKSITGANISIDGGWTAA"
     gene            17868..18272
                     /locus_tag="VNY79_02690"
     CDS             17868..18272
                     /locus_tag="VNY79_02690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor"
                     /protein_id="HWX71387.1"
                     /translation="MLCAARAQRLTPMRRHVLEALLDSHRPLGAYEIIERLARHGRPA
                     PITVYRALDFLRDNGLVHRIESRNAFVACVHNHGGDDLIVFLICERCDAVGEAPGGNV
                     AETLKASSRAAGFVPKSPVIEIAGICAHCRER"
     gene            18355..19251
                     /locus_tag="VNY79_02695"
     CDS             18355..19251
                     /locus_tag="VNY79_02695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HWX71388.1"
                     /translation="MQHSPQSRPLDPLAIALTVALCLIWGFNQVAVKLAIHDIPPLIQ
                     CLIRSVTATVLVLAWTQFRGIPLFKRDGTLLAGIIAGVLFALEFLLIYRGLLYTTATR
                     AVLFLYTAPFLVVLGARWLVKGDHFHLMQWFGMALSFAGIVIAFGLPTPAADPHQMLG
                     DVMMVGAAVAWAATTLVIKVSRLNQVSSEKTMLYQLVVSVPLLAAGVLVFGEHIDVMP
                     SAVALGALAYQAVWVVCVTYMAWFALIVRYSASRLSSFTFLTPLFGVVAGHMVLNEPL
                     SPPFALAVALVAIGLVLVNRPR"
     gene            19378..20634
                     /gene="ispG"
                     /locus_tag="VNY79_02700"
                     /gene_synonym="gcpE"
     CDS             19378..20634
                     /gene="ispG"
                     /locus_tag="VNY79_02700"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046429 - 4-hydroxy-3-methylbut-2-en-1-yl
                     diphosphate synthase activity [Evidence IEA];
                     GO_process: GO:0044237 - cellular metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HWX71389.1"
                     /translation="MMEFSGPAARHQTVAVAVGKVTVGGGAPVVVQSMTNTDTADVQA
                     TAQQVAALARAGSEMVRVTVDRDEAAAAVPHIKERLLRMNVDVPIVGDFHYIGHKLLA
                     DHPACAEALDKYRINPGNVGFKEKKDRQFSAIVETAIRHDKPVRIGANWGSLDQELLT
                     HLMDENASSNAPVDARDVTREAMVQSALLSAARAEEIGLPRSKIIISAKVSAVQDLIG
                     VYGELARRSDYALHLGLTEAGMGSKGVVASSAAMGVLLQQGIGDTIRISLTPEPNGDR
                     TLEVQVGQELLQTLGLRTFVPLVAACPGCGRTTSTTFQELAASIQQFIRDSMPGWKTR
                     YPGVEGLNVAVMGCIVNGPGESKHADIGISLPGTGEQPTAPVFIDGKKAVTLRGPTVS
                     ADFQKLVIDYIERRFGSGGAGRTAAE"
     gene            20651..21109
                     /locus_tag="VNY79_02705"
     CDS             20651..21109
                     /locus_tag="VNY79_02705"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71390.1"
                     /translation="MRRISSDWTFFYKRVFPVLWFGFLAVFVGIGVVNGQGLFIVIVP
                     IATIGFGYFIMQKLVFDLVDEVCDDGDALVVKNRGQEQRIALADIKNVNYSPFISPPR
                     VTLSLRRPTVFGEQIAFCAPVRLVPFSQSPVIADLIERVDHARRHHANGG"
     gene            complement(21124..22014)
                     /locus_tag="VNY79_02710"
     CDS             complement(21124..22014)
                     /locus_tag="VNY79_02710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HWX71391.1"
                     /translation="MAEEAARSRLGRGLAALMGDVRTENSVERPRGQRRLPTGALRPN
                     ARNPRRAFADAELEELAVSVRERGIIQPIIVRPLRGVDDEFEIIAGERRWRAAQRAAL
                     HEVPVVVIEATDAEALQLAIIENVQRADLNALEEAEGYRALIDEFDNSQDEIARIVGK
                     SRSHVANTLRLLKLSDAVKAHIRGGRLSAGHARMLIGTPDADALAEEIVARALNVRQV
                     EALARERAQQNGQKRGNGRSARKSAAKSADTLAFEKRVSDATGLVVSIDHHDDHGTLT
                     IRYRTLDQLDDLVQRLVRGQ"
     gene            complement(22101..>22223)
                     /locus_tag="VNY79_02715"
     CDS             complement(22101..>22223)
                     /locus_tag="VNY79_02715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome partitioning protein ParA"
                     /protein_id="HWX71392.1"
                     /translation="SEAPSYGKPVLVYDLKCSGSEAYLRLATEIIQREKELCAG"
BASE COUNT         3942 a         7337 c         7295 g         3649 t
ORIGIN      
        1 cgccaagaac gtggtcgccg ccggcctcgc cgacagctgc accatccaga tcgcctatgc
       61 gatcggcgtt gccgatccga tgtcggtcta tgtcgacacc cacggcaccg gcaaggtcga
      121 agaggcgaag ctgcagaagc tactgccgga ggtgtttccg ctgcagccga ccgccatccg
      181 ccgggcgctg aagctcaatc ggccgatcta tcggcgcacc gccgcttacg gccacttcgg
      241 ccgcgcgccg gaaaaggacg gcggcttctc ctgggaacgc accgatctcg ccgacacgct
      301 caagcgcggc ttgcgctgag gctccgctcg ccgatcagtg acgaaagccg ttggctctcc
      361 ggccggccgt gtactgcaag ggggatgacg cgggttcggg cacgctctcg ccctgatttc
      421 tgtaactgcg gattttgtcg cgcaacgagc ggatggagat cgcaaggagg cgggccgacc
      481 gggtcctgtt tccttgattg tctctcaacg tctgcagaat gaactcgcgt tcgacccggg
      541 cgagtgtatg cccgaccagg cgttcgatgc aggcgcgatc ggccgccgag agctcggagg
      601 ggcggatcga tggacgctcg ggcgtccttt cgattaagcg gcggctcggc atcatcgtct
      661 cccacgacat cggagtgatg ccccccaagg gaacagcctg attcgacgtg gttaataatc
      721 cgttacggca cccgttgcgg gcgtgatgcc gctggtttcg ccggccgtcg caagtgacgc
      781 accccgcgcc cccgaaccca ttgaccccga ttcgcccgcg cttcgaccag ctgcgcgatc
      841 gggggccatg ccggcgggtg ccgacgattc gcgcgctttc tgcgatcgga cggaaacgga
      901 acaaacccgc gaggcacgaa ttggcgaaaa gaaaacaaac ggaacaactg gcatgaaagc
      961 gattttgggc tgcgccgcac tggcgctcgc cgtcaccgcc gcgactgttt ccgcggatgc
     1021 aaaaggctgc atcaaaggcg ccatcgtcgg cggcgtcgct ggacacgtcg ccggccatca
     1081 tggcgtgttg ggagcggccg caggctgcat tgtcggtcac cacgaggcca cgaagcacga
     1141 gaaggcattg caatcgtcgc acgagcaacg ctgagaggcg ttttgcttcg ccctgctcca
     1201 cgcgcggacc ggccggctgt gccggccgtt tgcgtctttg ctataccggc gggaaacgcg
     1261 gacggccgcg accgcacggc cgcatcggct gatggatgtc gagcttaacc gcgcgcggac
     1321 cttcttcggc cgccgcaagg gacataagct gcgcaagcgg caggctgagc ttttcgacac
     1381 gctgctgccg cgcctcgcca tcgatctttc cggtcccgct ccgaccgagc tccgcacgct
     1441 ttttccggtg ccggtcaccg ggatcgagct cgagatcggt tttggcggcg gcgagtcgat
     1501 gatcgcgcaa gcccttgcgc ggccgggcac gggattcatc ggcatcgagc cgttcgccaa
     1561 cggcatggcg aaggcgctcg cggcgatcga acgcgaatcc ctgccgaatg tccgcctgca
     1621 cttcgaggag gccgcgagcc tgatcgcatg gcttcccgac gggtcgatgg ggcgcgtcga
     1681 tctgatccat cccgatccct ggcccaagcg ccgccattgg aagcgccgct tcgtccagga
     1741 cgcgaccgtc acgcagctcg cccgcatcct gcgtcgcggc ggcgaattgc gcttcgccac
     1801 cgacgtcgcc gactatgccg cctggaccct gcagcgcctg ctccgttcca ccgcattcga
     1861 ctggacggcg caatccgccg acgattggcg caaaccctgg cccggcttca tgaccacgcg
     1921 ctaccacgcc aaggcggcac gcgaggaacg actatcgtgc ttcctgattt tccgcagggt
     1981 ctgaccgcag agcggtatga aatttgattg tccacctgcc ttgcccaggg accgtcccgg
     2041 ctcagacaag cgcgtcggga aacgttgcgc ttcgcaattg gccgcgacgc ggggcggcaa
     2101 tgcgctcagc agcgcgcatc gccggcactt ccacttgagc ggtttgctgg tgtgcggctt
     2161 ttgcccggcc gactacacga tccgcgaccc gaccgtcata ccaagagcca agcagacgat
     2221 gagatcggtt ttcatttgtt tggccgggct tccagcgctt tgacgacctg aagcatgggc
     2281 tgtggcgagt tatggatcag tccaccgaat cccttctcca attcgaggag cattgcaatg
     2341 gcgcccccta cagcgagcgc gcacagcgtc aggatcatca ctgatgtaaa gttgcgcggc
     2401 gcgaacaagc caaaactggc gaaaagcaag gtcagccaga agaccaggag agcgacgaac
     2461 gcttttggag ttccctgccc aacctgctgc gccaacagcc agcccgtgtc gccgatcttg
     2521 gcggcaagcg tcatagcttg tcccagccac catcggtcgc gggggtcggc gggattcaag
     2581 gcaagcagcg aatcctcaag ctgttgcagc agttcgtatg tcgacgaatt gccgagatcg
     2641 acatccgcta gatgttcggg gaacaaatcg gcactcttgc gttcagcgta tcgccgcagc
     2701 gtctctcgag ctggttctgt ctgcgacccg tatcggcgca atatgcggtc aagtcgcagg
     2761 atttccgccg acagcgccgt cacctccccg ccgcgcgcaa tgaacaagtt gtttgcgttc
     2821 gaaatcaaca gcccaagcac cagcgccgaa atcgtcgcaa ccactgccat cgacatcgag
     2881 acgaggtttt tggtttcgtc ggtcacgtga tgcgctggca ggcattgtct tgcggtccag
     2941 ccggcaaatg cccctgccag gattaccgcg aagacgacaa gcccgatgaa tagtggattt
     3001 tccatgatcc aggttccgtc gcagagcgtt caagatgttg gattggggac ggcgaaacaa
     3061 ccattgccga gggggcattt tcgcaatcgg cacaatagca gttggcgact gctccgtgaa
     3121 agcagcccga gcctttattc aatcattgtg cctcgacatc aaagccgaca attatctgca
     3181 cgtgcaatgc gtcctcgcca gcagattttg gtactgaagc agctcgacgt attagccgga
     3241 gtcgagactc actccggcct attggttctg ccgcacctgc cagaagcgga ccacgcgttg
     3301 cgccgtcgat ttcgacagcc ggccgaaatt ggcaagggcg gcatcgaggc cttggctcga
     3361 ggtgcccgtt cggtcagggc gcgccatgat caatgccttc accgtcgccc agctcaggcc
     3421 ggcggctttg cacatgatca ggaccggatc gggccgctct ccgtccatga gccgatcggc
     3481 gacggggatc ggcaccttgg cgagggccgc cagcgccgcc accgcttcct cgtacttgcc
     3541 ctcgctgcag aatgaagcga gcgtcgcctc ggtgaggcgc cctgcccgat cgaggctgag
     3601 caccgtgcgc tgggcggcag cgtagtcgcg cggcgccaca cgcgcgccga cctcctgcta
     3661 cacccttgcc agcacctgct ggatttccgc cttgaagtct ggcttggccg aggcgagcag
     3721 gcgcttgtgc acgaccgccg tcgccttggt cagcaattcg cggaacatcg gtgcgggaat
     3781 atccggccgc agcccgacct tctcggcaag ggtgccgtcc ttctcggcgc gctcgatcaa
     3841 gcgcgaaaag ccggtcttgg aaatgcgcgc gccgcgattg tcggcgatgc ggagcgcgac
     3901 ctcgcgatcg ccgcgccgca ccaactcgtc ggtgaccgcc tcgccgagcg tcgggcgcgc
     3961 cgaaatggcc tgcagatgcg cctgactctt ggttcgcgcg acgccgacaa ggtcgtcctc
     4021 cggcaggcgc gacgccagct tgagcaccgg cccggcgacg gcgatgtcgt cgtcatgagc
     4081 gagccggcgc aagacgttga ccggcgcgtt gctcaccggt gcaagacgat ttgccagctc
     4141 ggcgcgcgcc ttcgcttcga tctcctcgat caaaatcccg aacacgtcgt cgaacaggcc
     4201 gacgtgctgg tcgttgtagc tgcgggctcc atcgagaaag agcgcggtga tgcgccggag
     4261 cgtctccacg cgcttttggc gggagccgtg ctggacgacc tcttcgagtt cggggatcag
     4321 cgagaggctg gcacccattt tccaatccat gaaattcggc gaatggcgcg gtgcccgcga
     4381 ccaagatatt gcgccaatca tgaaggaaat cttgccgcgg aaactcgcgc cgccatggtc
     4441 ggcttgcggt gcgtcgcggc cgtgcggcac ccttgcaacg gctggcgaaa gcgctatatt
     4501 cacggggtcc gtcatggata cctcataacg gtcggttgat ccgaacggtc ttgagagtgg
     4561 gccccccggg acccgctctt ttttgttact tgagaccgac cgttgctccg gcggacgcat
     4621 gtttgcagaa cgcttaagtc gcgaaccgca tggacgagag tctgatgacg tttgccgacg
     4681 agccgcggct catcaccgag ccggggcggg cggcgcgcgt cgccttgatc gccgcgccgg
     4741 cgctggccgc gctcggctat cggctggtgc gtgtgcgcat ttccggcgcc gccgggcaga
     4801 cggtgcaaat catggccgaa cggccggacg gcacgatgac catcgaggac tgcgagttgg
     4861 cgtcgcggac gctctcgccg gtgctcgacg tcgccgaccc gatcgagggg ccgtatcggc
     4921 tggagatttc ctcgccgggc atcgaccgtc cgctggtgcg gcgctcggat ttcgaccgct
     4981 atgccggaca tgtggcgcac gtggagatgc tggtgctcgt caacggccgc cggcggtttc
     5041 gcggcgagct tgccggcacc gacggcgact gcgtgcgtct gcgccgcagc gatgccgccg
     5101 ccggcgagcc gctggaagtc ctgctgcgca tcgacgacat gatggaggcg aggcttgttc
     5161 tcaccgacgc gctcattgcc gagtcgctgc ggcggagcaa gcaggaggag cgcgccgccc
     5221 gggcgcgcgg acgccgtgac gaaaacaaca acccggagcc gcatcgcccg gaccagacga
     5281 acaccaacac cgtgccggcg caggcccgcc gcgcaaggac agcgcaagga gagtgaacca
     5341 tggcgacggt aagcgccaac aaactcgaac tactgcagat cgccgacgcg gtcgcccgcg
     5401 aaaaggcgat cgaccgcaag atcgtgctcg gcgccatgga agacgcgatc gccaaggccg
     5461 cgcgctcccg ctacggcagc gaaaccgacg ttcacgccga gatcgatccg aagagcggcg
     5521 agctgcacct gtcgcgccac atgctggtgg tggaggcggt cgagaatccg gcgtcccaga
     5581 tcacgctcga cgatgcccgc cgtcatcacc cggccgcaca gatcggcgac acgatatccg
     5641 acaagctgcc gccgctcgaa tacggccgca tcgccgcgca atcggccaag caggtcatcg
     5701 tgcagaaggt gcgcgaagcc gaacgcgacc gtcagtacga ggaatacaag gaccgcatcg
     5761 gcgacatcgt caacggcatc gtcaagcggg tcgagtacgg caacgtcgtc gtcgaccttg
     5821 gccgcggcga agcgatcgtg cggcgcgacg agatgctgcc gcgcgaagtg ttccgcaacg
     5881 gcgaccgcat ccgcgcctac atctacgacg ttcgccgcga gcagcgcggg ccgcagatct
     5941 tcctctcgcg tacccacccg caattcatgt cgaagctgtt cgcacaggaa gtgccggaga
     6001 tctacgacgg catcgtcgag gtgaaggcgg tggcgcgcga tccgggatcg cgggccaaga
     6061 tcgcggtggt gtcgcgggat tcctcggtcg atccggtcgg cgcctgcgtc ggcatgcgcg
     6121 gctcgcgcgt gcaggcggtg gtcaacgaac tccagggcga gaagatcgac atcatcccct
     6181 ggtcgcacga catcgccacc ttcgtcgtca acgcgctggc gccggccgag gtcgccaaag
     6241 tggtgctcga cgaggagcgc gagcgcatcg aagtggtggt gcctgaccag cagctctcgc
     6301 tcgccatcgg gcggcgcggg cagaacgtgc ggctcgcctc gcagctcacc ggctgggaca
     6361 tcgacatcct gaccgagcag gaggaatccg agcgccgcca ggccgaattc gaaaaccgca
     6421 cgcgcatctt catcgatgcg ctcaacgtcg acgaggtcgt cggccagttg ctcgcctcgg
     6481 aaggcttcaa ttccgtggag gagctcgctc tggtggacgc caaggagatc gccggcatcg
     6541 aggggttcga caacgacacg gcgctcgagc tgcagacccg cgcccgcgac tacctcgcca
     6601 agatcgaggc cgagttcgac gccaagcgcc gcgtgctcgg cgtcgaggac gcggtcaagg
     6661 acgtgccggg cgtgaccacc gccatgctgg tgcgtttcgg cgagaacggc atcaaaacgg
     6721 tcgaggattt ggccggctgc gcgaccgacg acctcgccgg ctggaccgag cggaaggacg
     6781 gcgaaaccgt gcgcgaaccc ggcattctcg acggcttcga actctcgcgc gaggacgccg
     6841 aggcgctggt catgcaggcg cggttgaagg cagggtgggt tgcggaggcc gatctcgcac
     6901 caccggccgt tgaagaagcc ccgctgcccg aggcgcaagc ctgagcggcg gctgaagaga
     6961 caagagaggc gcatgatcga cgccgcgcgc gacatcgaac tggacaccgg accgcgcgca
     7021 cccgaacggg agcggctatg cgtcgcgact cgcacggtgc ggccggtctc cgagctgatc
     7081 cggttcgtca tcggaccgga aggcgagccg gtgcccgatc tcaagcgtaa attgccgggc
     7141 cgcgggatct gggtgactgc aacaaacggc gcccttggcg aggcgatcaa gcgcaaggcg
     7201 ttctcccgca gcttcaaacg cgaaattcgc ctgcctgcgg acctcgttgc ccggaccgaa
     7261 cggctcctcg agcgcgccgt gatcgatgcg ctggcgatcg ccggcaaggc cggtctggtg
     7321 gccgccggct tcggcaagac ggctgcggcg ctggagcacg agaaggtcgc cggcctgctg
     7381 cacgccgcag aggccgcgtc cgacgggatc cgcaagctcg acgcgctcat gcgccgccgg
     7441 ttctccggta aggcgccggc cgtggtccga tttttgacct cggcgcaatt ggatttggca
     7501 ttgagccgcc caaatgtgat acatgcagcc ctgctcgccg gccctgcgag cgagactgtt
     7561 ttggcgcgct gccggcgcct ggaacggttt cggaccggcg atccgccccc gaaggccgca
     7621 gaggctgcgc cggacttagc cggcgaggga actgagcgcg tatagaaatg gaagcgtatg
     7681 actgagacga tcaagaatgc cggcgaaaag ctgagcgtga cctcgacgaa gacgctgacg
     7741 ctcaagcgtg gcggcgtcga gcagggcgtc gtgcgccaga gcttcagcca tggtcgcagc
     7801 aaggcggtcg tcgtcgagaa ggtaaagcgc cgtatcgccg gtcccggcga ggccaagccc
     7861 gaagcggtgg cgcccgccgc tcgcggcgct gtgcccaagc gcggcatcgt caccgccaaa
     7921 tcaccggcga cggcaccttc ggccacgccg gcgcccggca ccgctgcccc ctcgcccaag
     7981 ccctccggcg tcgtgctgcg caccttgacg gacgaggagc ggagcgcccg cgcgcacgcg
     8041 ctcgccgacg cccgcctgcg cgaggccgag gagcgcaaga tcgccgaaga agaggcccgc
     8101 attcgccaga gccgcgagga agtcgagcgc tcggaacgtg cgaaggcgga agcgcgcaaa
     8161 cgcgacgagg aagagcgccg caagcacgac gaagaaacca aacgcaaggc cgacgaggtc
     8221 gccaagaagc gcttcggcgc cgatactgcg acggcagcga agccgggcgc gcgcccggcg
     8281 ctcgaagccg acgaggagga agcaccgcgg agtatacgcc gcggcagcgc ggcgccgcgt
     8341 ccgacgcccg cccccaagcc gacccgcact gccgcggaaa agcgccgcgg acggctcacc
     8401 gtcgtcaccg ccctttccgc cgatgaggag cgcgaacgtt cggtcgccgc cttccgccgc
     8461 cgcgtccagc gcatgaccgg gcatcgcgac agcgagccga aggaaaagat cgtccgcgaa
     8521 gtgaccattc ctgagacgat caccatccag gagctggcca accgcatggc cgagcgcgcc
     8581 gtcgacgtgg ttcggctcct gatgaaacag ggccatatgg cgaagatcac cgacacgatc
     8641 gacgccgata ccgcgcagct ccttgccgag gaactcggcc acaccgtgcg ccgcgtctcc
     8701 gaggccgacg tcgaagaagg catgttcgat gccgctgacg atccggcgag cctgctgccg
     8761 cgcgcgcccg tcgtcaccat catgggccac gtcgaccacg gcaagacctc gttgctcgac
     8821 gccatccgct cgaccgatgt cgcggccgcc gaggcgggcg gcatcaccca gcacatcggc
     8881 gcctaccagg tgacctcgcc gtcgggcggc cgcatcacct tcatcgacac gcccggccac
     8941 gccgccttta ccgcgatgcg ggcccgcggc gcaaaaatca ccgacatcgt ggtgctggtg
     9001 gtggctgccg acgacggcgt catgccgcag acggttgagg cgattcacca cgccaaagcg
     9061 gcgaaggtgc cgatcatcgt cgccatcaac aaggtcgaca agccggacgc caagcccgag
     9121 cgtgtgcgca cggagctgct gcagcacgaa atccaggtcg aatcgctcgg cggcgacgta
     9181 ctcgaactcg aggtctccgc gaagcaaaaa ctcaacctcg acaagctgct cgacatgatc
     9241 gccctgcagg ccgaggtgtt ggagctcaaa gccaacccga accgtgcggc cgaaggcacc
     9301 gtgatcgagg cgcggcttga ccgcggccgc ggaccggtcg cgaccgtgct ggtgcagcgc
     9361 ggcaccttga aacccggcga cattgtcgtg gccggcagcg aatggggccg ggtgcgcgca
     9421 ctggcgtcgg acaccggcca ccccgtcatc gccgccgggc cgtcgatgcc ggtggaggtg
     9481 cttggcttca acggcacgcc ggaagcgagc gaccggctcg gcgtcgtcca ctcggaagcg
     9541 cgcgcgagag agatcgccga ttaccgcgcc cggcagaaac gcgagaagat ggcggcgcgg
     9601 cagaccggca tgcgcggctc gctcgagcag atgatgaatc agctcaaggc caccgggcgc
     9661 aaggagttcc cgctgttgat caaaggcgac gtccaaggct cggtcgaagc catcgtcggc
     9721 gcgctggaga agctctcgac cgacgaagtg gcggcgcgga tcatctttgc cggcgtcggc
     9781 ggcatcaccg aatccgacgt gacgctggcc gaggcctcgg gcacggcggt gatcgggttc
     9841 aacgtgcggg cgcacaagga agcgcgcgaa gccgccgagc atgcagggat cgagatccgc
     9901 tactacaaca tcatctacga cctggtcgac gacgtgaaga aggcgatgtc cggcctgctt
     9961 gcgccgacgc tgcgcgagac catgctcggc aacgccacga tcctcgaaat cttcaaggtc
    10021 tcgaaggtcg gcaacgtcgc cggctgccgc gtcaccgacg gcgtcgtcga gcgcggcgcc
    10081 aacgtccggc tcattcgcga caacgtggtg gtccatcagg gcaagctgtc gcagctcaag
    10141 cggttcaagg acgacgcgcg cgaggtcgtg gccggccagg aatgcggcat ggccttcgag
    10201 aattatcacg acatgaaggt cggcgacgtc atcgagtgct accgggtgga gagcgtgcag
    10261 cggacgctgt gagttcgagg ctccaggtct gctcccgccg ccattgccgg cccggaccga
    10321 cccggcaatc catgaggcca agtcgatttt ttcaaagttg gacatgaatg cccaggccag
    10381 gctcgggcat gacgagcaga taaaaatgcc ccgccatcat catcgcgaac aatccgccgg
    10441 cggctcgcag cgccagctgc gcgtcggtga attgatccgc cacgaggtcg ccgagatgct
    10501 gtcgcgcggc gacgtgcacg atccggtcat cgaggcgcac atgatcacgg tgccggaggt
    10561 gcgcatgagc gccgacctgc gcctcgccac gatctacgtc atgccgctcg gcggccgcaa
    10621 cgaggaggac gtgcttgacg cgctcgagcg caacaagcgc tacatgcgcg gcgaaatcgc
    10681 ccgccgcgtt aacctgaaat ttgctcccga gattcgcttt cgcatcgacg agcgattcga
    10741 cgaagccgaa cgaatcgaga agcttttgcg aacacccgag gtccgccgcg atcttgccgg
    10801 cgaaaaggac gagtaatggc cacgcccgca ttcccgccgc tcgccggctc tcccgcacct
    10861 gcggagcaag agcgaatgga ggagcgagcg aaacagaaga aacggcacaa gcgcgacgtg
    10921 cacggctgga tcgtgctcga caagccggtc ggcatgacct cgacccacgc cgtgtcggtg
    10981 atcaagcatt tgtttaccgc aaagcgcgcc ggccacgccg gcacgctcga tccgctggcc
    11041 tccggctgtc tgccggtcgc gcttggcgag gcgaccaaga ccgtgccgtt cgtggtcgac
    11101 agccgcaagg cctacgtttt caccatctgc tggggcgagg aacgcgacac cgacgatgcc
    11161 gaaggccgcg tgacggcaac gagcgaagtg cggcccgacg cggcggcgat ccgcgccctg
    11221 ctgccgcgct tcaccggcac gatcgagcag gtgccgccgc gcttctccgc gatcaagatc
    11281 gccggggaac gcgcctacga tctcgcgcgt gagggcgaga ccgtcgagat cgcgccccgg
    11341 gcggtgacgg tccaccggct ggaactcgcc gaaaccccgg ggccgggtca tgccgtcctt
    11401 accgccgaat gcggtaaggg cacctacgtg cgcgcgctcg ctcgcgatct cggccgcatg
    11461 ctgggcacct tcggccatgt ttgcgccttg cgccgaagcc gggtaggccc gttcggcgag
    11521 cgcgagatga tttcgctgga acggcttgaa tctttgtgcc atagagcggc cgctggcgag
    11581 ggtcacctcg ccgacatact cctgccgatc gagaccgcgc tggacgacat cccggcgctg
    11641 gccgtgagcc cggcagatgc ggcgcggctc caccggggcc aagccgtctt gttgcgcgga
    11701 cgggatgcgg ccgttttccg cggcatggtc caggtcgctt cgggcggtca ggtggtggcc
    11761 attgccgagg tcgaccgcgg cgagatcgtc cccaggcgcg tgttcaattt agccggcatc
    11821 gcaggtcgag ccggcagacg agaaggttag tgccgatgtc gattaccacc gcgcgcaaag
    11881 cggaagttat caagacgtat ggcgccaagt ccagcgacac gggctctccc gaggtacagg
    11941 ttgccctgct ctccgagcgg atcaacaacc tgaccgatca cttcaagacc catatcaagg
    12001 acaaccactc gcggcgcggg ctgctcaagc tcgtctcgca gcggcgccag attctcgact
    12061 acctgcggcg taccaacgag ggccgttaca aggagctgat tgaacggctg ggaattcgcc
    12121 gttgagacgt tcgcgcgcgg aagaaaaccc gcgcgctccg tggcggagtg cgtaagacac
    12181 ccgcccactt gcccggcagc aacgctgcca atcatcgcga cgggcgctgc ccgtacgcat
    12241 cgccggaagg tccggaggcc atggcaggat cgccagacgc tgacaggctt tgcagccctg
    12301 ctgcgccgac agcgtctcgc cgtcttgctt atggctttcg ctcttccgcg aaaaccatga
    12361 aagacaatcg caatgttcga tattcaccgt gtgcaacttg actggggtgg ccgcaagctc
    12421 acgctagaga ccggcagaat ggcgcgccag gccgatggcg ccgtgctcgc cacctacggc
    12481 gacaccagcg tgatcgccac cgtcgtcgcc gccaagcagc ccaaggaagg catcgacttc
    12541 ctgccgctca ccgtcaacta tcaggaaaaa ttctacgccg caggccgcat ccccggcggc
    12601 tatttcaagc gcgaaggtcg tccgaccgag aaggagacgc tgacctcgcg gctgatcgac
    12661 cggccgctcc ggccgctgtt cgccgacggg tggcgctgcg atacgcaagt catcatcacc
    12721 acgctgtcgc acgatctgga aaacgatccg gacatcgtgg cgttggtcgc ggcctccgcc
    12781 gccctcaccc tttccggcgc gccattcatg ggcccggtcg gcggcgcccg cgtcggcttc
    12841 atcaacaacg agtacgtgct caatccgcag atcgacgaga tgacggagag cgggctcgac
    12901 ctcgtcgtcg ccggcacgca ggacgcggtg ctcatggtcg agtccgaggc gaaggaactc
    12961 accgaggaga tcatgctcgg cggggtgatg ttcggccacc ggcacttcca gccggtgatc
    13021 gaagccatca tcaggctggc ggaaaaggcg gccaaggagc cgcgcgagct caccctgccg
    13081 gagaatgcgg cgctcgagaa cgaaatgcgt gcgctggtcg agcaggacct gcgcgcggcc
    13141 tatgcgatcc cggaaaagac ggcgcgccac aaggcgatcg acgccgtcaa ggaacgcgta
    13201 ctcggccact tcagcccgca gggcgccgag agcgcgaaat atccgccgct gcaggttgcc
    13261 ggcgtgttca aggagcttga aggcaagatc gtacgctgga acatcctcga caccggcacg
    13321 cgcatcgacg gccgtaacgt gaagacggtc cggccgatcg tgtgcgaggt cggcgtactg
    13381 ccgcgcacgc acggttcggc gctgttcacg cgcggcgaga cgcaggctct ggtggtggcg
    13441 acgctcggca ccggcgagga cgagcagttc gtcgacgcgc tgcagggcac ctacaaggag
    13501 acgtttctgc tgcactacaa tttcccgccg ttttcggtcg gcgagaccgg ccgcatcggc
    13561 gcccccggcc ggcgcgagat cggccacggc aagctcgcgt ggcgctccat ccatccggta
    13621 ttgccggcgc atctcgagtt cccctatacg ctccgcgtcg tctccgagat caccgaatcg
    13681 aacggttcgt cgtcgatggc gacggtctgc ggcacctcgc tcgcgctgat ggatgccggc
    13741 gtgccgctga agcggccgac cgcgggcatc gccatggggc ttatcctcga ggacaagcgc
    13801 ttcgccgttc tctccgacat tctcggcgac gaggatcacc ttggcgacat ggacttcaag
    13861 gtcgccggca ccgagcgcgg cgttacctcg ctgcaaatgg acatcaagat ctccggcatc
    13921 accgaggaga tcatgcgcat cgcgctcgcc caggcgcagg aaggccgcat gcacatcctc
    13981 accgagatgg gcaaggcgat cacccgccac cgcgccgaac tcggcgagca cgcgccgcgc
    14041 atcgaggtgt tctcaatccc ggtcgacaag atccgcgagg tcatcggctc gggcggcaag
    14101 gtgatccgcg agatcgtgga gaagaccgga gccaagatcg acatctccga cgacggcacc
    14161 gtgaaggtcg cctcggccaa ggccgaatcg atcaaggcgg cgctcaactg gatcaagtcg
    14221 atcacctcgg agcccgaggt cggacaggtc tacgagggca cggtggtcaa ggtcatggac
    14281 ttcggcgcgt tcgtgaattt cttcggcgcc aaggacggcc tcgtccacat cagccaattg
    14341 gcgccacgcc gggtgcagaa gacgaccgac gtggtcaagg aaggcgacaa ggtgaaggtt
    14401 aagcttctcg gcttcgatga acgcggcaag gtgcggctgt cgatgaaggt cgtcgaccag
    14461 gagagcggcg aagacctcga ggcgaagcag aaggcggagg gcgagcaggg gcgcgaggcg
    14521 gccgccgcgg gcggcgccgc cgaataacgc ccgcccgtcg tcactgaaag gcacaacacg
    14581 atcgcaaaag gcggccgcgc ggccgccttc tttattgcgc atggccgcag cggcgcgttt
    14641 tttactcgca gcgccgggcg cgcgagccga cagccgcgaa cacacgaaac caatttagct
    14701 aaatatcgcg tcgttaagcg caaaccgacg cgctgtgatc gcggtcacgt cttggcgcgc
    14761 ctcgatgcgg tatgcgtgag gtggtgaggg cgacgtggac cagaaggagg tcacatgacg
    14821 acccttatgc aaaggacgcg ctcaaggatg gttcgctggt tcaggcagat tacgaggccc
    14881 cacaaggcgc cgtaccgctg gtacgagccc gacaacagcg gcgtgtgaat cgatcgggcc
    14941 tcgcgacctt tcccatccct gaaggccggc tcttcaggca agtcccaact cagtgaacga
    15001 agcgccgtaa tgatcggcgg cgtcaggcgc gaagcagcag aacacgacgc gttcgatgcc
    15061 gcgggccgat gcggcgactt ccgcggcgac ggtgccgacg gcgatgcgcg cggcgcgatc
    15121 ggccgggaag cggtagacgc cggtcgagat cgccggaaag gcaatcgacg caagcttgtg
    15181 cgcggcggca agatcgagcg cggtgcggta gcacgacgcc agcaggtcgt cctctccctt
    15241 gcggccgcgg ctccagaccg gaccgacggc gtggatcaca tgcctggcgg gaagccgata
    15301 gccgcgcgtg atctttgccg agccggtcgc gcagccgccc agcgtccggc actccgccag
    15361 cagttcgggc ccggcggcgc ggtggatggc gccgtcgacg ccgccaccgc cgagcagggt
    15421 gtggttcgcg gcgttgacga tggcgtcgag cttgagtgtg gtgatgtcgg ccacgcagac
    15481 ttccagtcgg gcggcgccga cttcggcggt gatcagcggt ttcgcctcgg ccatggcggc
    15541 gagcctatca cgcccattcg gcctgcgcct cggcgcgcag atcgaccgtg ctgcgcacgc
    15601 cgatatcgtc gaaatgatcg tcgaggaagc gccgcgcggc gcgcttgccg ttgagccgca
    15661 gcatctcgaa gtaatcgtag tcggtcgaca tcttgccgac ggagtcgaag tgggtgccga
    15721 ccggctcgag caggatgcga tgcacattga tgcgccggta ttgcccgggc ccggtgccgc
    15781 gcggcaagcg gccctgatcg atcaggcggg cgacgaagtc gatggcgcgg tattcgccga
    15841 tcagcgagga gttgaaggtg atctcgttga tgcggttcat gatctcgggc gccgacgtcg
    15901 gcgtgcgttc gcgcaccagc ggattgatct gcaccaccag cacgtcctcg gtcgtggtgg
    15961 tacgaaaaaa tggaaagatc accgggttgc cgagatagcc gccgtcccag tagggcaccc
    16021 cgtcgatctc gacggcgcgg aacaagagcg gcaggcaagc cgacgccatc accgcatcgg
    16081 ccgtgatctt ctcgcgcggg aagatgcgca cgcgcccggt ctgcacattg gtcgcggaaa
    16141 cgaagatctg cagatcggag caagcgcgca acgcctcgaa atcgacgaag cgttcgatca
    16201 gatccttgag cggattgatg ttgagcgggt tgacgtcgta gggcgaaaaa tagcgcgaca
    16261 gcgcatcgaa ccaggcctga atcggcgtgc cttcgagcgg catgaacgac aacaggcgct
    16321 ccatcaccgc gcgctgcagc gccggcaggt tgccgttgct gctcgccgcg cgccagaaat
    16381 cggcgagccg cttctgcgcc tccgcgcgcc cgccgcgcac caggccgtcg gcgaggagcg
    16441 ccgcattgac cgcacccgcc gaggtgccgg aaatgccttc gacgctgagc cgctcgtcgc
    16501 tcaggagatg gtcaagcaca ccccaggtga aggcgccgtg ggcaccgccg ccctgcaagg
    16561 cgagattgac gcgcttggtc ttctgcgcgc ctcgggcatc cgccgcggcg ccgggcagca
    16621 gcgagctgag aagcttcttc atccgccggt cattccgcgg cacgcgccgc gcgtacgcgg
    16681 aaaccataac cacgaccagc gaggcttttg gattcgcagc atgggatcaa gccgtggtga
    16741 ttatggattc cgggctcgtc gcccggcccc gtaacgacgc gtcatgccgc cgtccagccc
    16801 ccgtcgatcg aaatattggc gccggtgatc gacttcgccg catcggagca gagatagacc
    16861 gcgagcgcgg cgatctcgcc gacggcgacg aactccttgg tcggctgcgc cgcgagcagc
    16921 acgtcgcgct tgacctgttc ctcggtcagc ccgcgcgcct tcatcgtgtc gggaatctgc
    16981 ttctcgacca gcggcgtcca cacatagccg gggctgatgg cgttgacggt gatgccgaag
    17041 gtcgcggcct caagcgcgac cgtcttggtg aggccggcga gaccatgctt ggcggagaca
    17101 taggcgacct tgaacggcga ggcgaccagc gaatgcgcgg aggcggtgtt gatgatgcgg
    17161 ccccatttgc gcgccttcat gcccggaagc gcggcgcgaa tggtgtggaa cgcggacgaa
    17221 agattgatgg cgatgatctg gtcccatttc tcgaccggga attcctcgat cggcgcgacg
    17281 tgctggatgc cggcgttgtt gacgagcacg tcgagagagc cgaacgtctg cgccgttgta
    17341 cgcaccatct cggcgatctc ggccggcttg gtcatatcgg cgggcgaata gagcgccttg
    17401 acggcgtatt ccttttcgat gccgctacgc tcctgttcga tcgcggcctt gtcgccaaag
    17461 ccgttgatgg tgacgttggc gccctcggcg gcaagcgcgc gggcaacggc caagccgatt
    17521 cccgaggtcg agccggtcac gagcgccgtc tttcctttca gcatgccggt ctcccaaatt
    17581 cgcgagacgc cttgatcgaa agcgcggttt ctcgtctgac tgtcccgctg agcggcgaca
    17641 atgtgggagg cttcttgctg cagcgcaaca taaaaagtgg ccggttcgtc acgttttcgc
    17701 gatgccggcc gaaccgatac aatgcgggag actcaagcat gaagctctct cgcgcccgcc
    17761 gggcatgacc cttcgctgcc gggaagtcac gatgccgcag tccgtttttc cggcgcctgg
    17821 accacgacca cggacgctgc gccagcgcgg ccatcgcgca cgcggaagtg ctgtgcgccg
    17881 cccgcgcgca acggctcacc ccgatgcgcc gccacgtgct cgaggcgctg ctggacagcc
    17941 accgcccgct cggcgcctac gagatcatcg agcgacttgc ccggcatggg cgtccggcgc
    18001 cgatcacagt ctatcgcgcg ctcgattttc tgcgcgacaa cggcctcgtc caccgcatcg
    18061 agagccgcaa cgccttcgtc gcctgcgtgc acaatcacgg cggcgacgac ctcatcgtct
    18121 tcctcatctg cgaacgctgc gatgcggtcg gcgaggcgcc cggcggcaac gtagcggaaa
    18181 cgctcaaggc ctcctcgcga gcggccggat tcgtgcccaa gagcccggtg atcgagattg
    18241 ccggcatctg cgctcattgc cgcgagcgat gagggcttgc tttgcgctcg gccggcggtc
    18301 tttgtcgcac cgacattgtg cgcagtgccg atgcgttgaa attgaactga actcgtgcag
    18361 cattcccccc aatctcgccc gcttgatccg ctcgcgatcg cactcactgt cgcgctttgc
    18421 ctgatctggg gattcaatca ggttgcggtc aagctcgcga tccatgatat ccccccgctg
    18481 atccagtgcc tcatccgctc ggtcaccgcc acggtcctgg tcctcgcctg gacgcagttt
    18541 cgcggcattc ccttgttcaa acgcgacggc accttgctgg cgggaattat tgccggggtg
    18601 ttgttcgccc tcgagttcct gctgatctac cgcggcctcc tttacacaac ggcgacccgg
    18661 gcggtgctct ttctctacac cgcgccgttc ctggtcgtgc tgggcgcgcg ctggctggta
    18721 aagggcgacc acttccatct gatgcaatgg ttcggaatgg cgttgtcctt cgcgggcatc
    18781 gtcattgcct tcggcctgcc gacgccggcc gccgatccgc atcagatgct gggcgatgtc
    18841 atgatggtcg gggcggcggt cgcctgggcg gcgacgaccc tcgtgatcaa ggtgagcagg
    18901 ctcaaccagg tcagctccga gaagacgatg ctttaccagc tcgtcgtctc ggtgccgctt
    18961 ctcgccgccg gagtcctcgt cttcggcgag catatcgatg tgatgccctc ggccgtggcg
    19021 ctcggcgccc tcgcctatca ggccgtctgg gtggtgtgcg tcacctatat ggcctggttt
    19081 gctctgatcg tgcgctattc ggcatcaaga ctgtcctcgt ttaccttcct gaccccgttg
    19141 tttggcgtcg tggccggcca catggtcctc aacgagccgc tctctccgcc ctttgccttg
    19201 gcggtggcgc tcgtcgccat cgggttggtg ctcgtaaacc ggccgcggtg aggctatatc
    19261 ccggtcgacc aacccccatg atcacggcca ttgcgcatgc ggcaggacgg tggttatggg
    19321 ttcccgcttg cgcgggagcg acggacaggc ctgccgggca aaggaccagg taacgagatg
    19381 atggaattct ccggccccgc cgcacggcat caaaccgttg ccgtcgccgt gggcaaggtc
    19441 accgtcggcg gcggcgcacc agtcgtcgtg cagtcgatga ccaataccga caccgccgac
    19501 gtgcaggcga cggcgcaaca ggtcgcggcg ctggcgcgcg ccggctcgga aatggtgcgc
    19561 gtgaccgtcg accgcgacga ggcagcggcc gcggtgccgc acatcaagga acggctgctg
    19621 cgcatgaacg tcgacgtgcc gatcgtcggc gatttccact atatcggcca caagctcctt
    19681 gccgatcacc cggcctgcgc cgaagcgctc gacaagtacc gcatcaatcc cgggaatgtc
    19741 ggcttcaagg agaagaagga ccggcagttc tccgccatcg tcgagaccgc gatccgccac
    19801 gacaagccgg tgcgtatcgg cgccaactgg ggctcgctcg accaggagct gctgacgcat
    19861 ctcatggacg agaacgcgag ctccaacgct ccggtcgatg cgcgcgacgt gacgcgcgag
    19921 gcgatggtgc aatcggcgct gctgtcggcg gcacgcgccg aggagatcgg cctgccgcgc
    19981 tcgaagatca tcatctcggc caaagtttcg gcggtgcagg acctgatcgg cgtctacggc
    20041 gaactagcgc ggcgctcgga ctacgcactg cacctcggcc tcaccgaggc cggcatgggc
    20101 tcgaagggcg tcgtcgcctc gtcggcagcg atgggcgtcc tgctgcagca gggcatcggc
    20161 gacaccatcc gcatctcgct cacgcccgaa ccgaacggcg accgcacgct ggaagtgcag
    20221 gtcgggcagg agctgttgca gacgctcggg ctgcgcactt tcgtgccgct cgtcgccgcc
    20281 tgcccgggct gcggccgcac cacctcgacg acgttccagg agcttgcggc gagtattcaa
    20341 caattcatcc gcgactccat gccgggctgg aagacgcgct atccgggagt cgaaggtctc
    20401 aacgtcgcgg tcatgggctg catcgtcaac ggacctggtg agagcaaaca tgccgacatc
    20461 ggcatctccc ttcccggcac cggcgagcag ccgaccgcgc cggtcttcat cgacggcaag
    20521 aaagcggtga cgctgcgcgg cccgaccgtg tcggcggatt ttcagaagct cgtgatcgat
    20581 tacatcgagc ggcggttcgg ctccggcggc gcgggacgaa cggcagcgga gtaagatcaa
    20641 gcgacgcgcc atgcgccgca tttcctcaga ctggaccttc ttctacaagc gggtctttcc
    20701 ggtcctgtgg ttcggattcc ttgctgtgtt tgtcggcatc ggcgtcgtca acggccaagg
    20761 ccttttcatt gtgatcgtgc cgattgccac gatcgggttc ggctacttca tcatgcagaa
    20821 gctggtgttc gatctcgtcg acgaggtctg cgacgacggc gacgcgctgg tggtgaagaa
    20881 ccgcggccag gagcagcgca tcgcgctcgc cgacatcaag aacgtcaact attccccgtt
    20941 catcagtccg ccgcgcgtca ccttgtcgtt gcggcggcca acggtcttcg gcgagcagat
    21001 agctttctgc gccccggtcc gcctcgtgcc gttttcccaa agcccggtca ttgccgatct
    21061 gatcgagcgt gtcgaccacg cgcgccggca tcacgccaat ggtggatagc tgaaattagc
    21121 tgactattgc ccgcgcacca gccgttgcac cagatcgtcg agctggtcga gggtacggta
    21181 gcggatcgtc agcgtgccgt gatcgtcgtg atgatcgatg ctgacgacca gtcccgtggc
    21241 atcggaaacg cgcttttcga acgccagcgt gtcggcgctt ttcgcagccg acttgcgcgc
    21301 gctgcggccg ttcccgcgtt tttgtccgtt ctgctgcgcg cgctcgcgcg cgagcgcctc
    21361 gacctggcgc acgttgaggg cgcgggcgac gatctcttcg gcgagcgcgt cggcgtccgg
    21421 cgtgccgatg agcatgcgcg cgtgcccggc gctgagcctg ccgccgcgga tatgggcctt
    21481 gaccgcatcc gagagcttca acaggcgcag cgtgttggcg acatggctgc ggctcttgcc
    21541 gacgatgcgg gcgatctcgt cctggctgtt gtcgaattcg tcgatcagcg cgcggtaccc
    21601 ttccgcctcc tccagcgcgt tgaggtcggc gcgctgcacg ttttcgatga tcgcgagctg
    21661 cagcgcctcg gcatcggtcg cctcgatgac caccaccggc acctcgtgca gcgcggcgcg
    21721 ctgcgccgcg cgccagcggc gttcgccggc gatgatctcg aactcatcgt cgacgccccg
    21781 caacggccgc acgatgatcg gctggatgat gccgcgctcg cgcactgaaa cggcgagttc
    21841 ctcgagctcg gcgtcggcga acgcgcgccg cgggttgcgc gcgttgggcc gcaacgcgcc
    21901 ggtcggcagc cgccgctgcc cgcgcggccg ctcgaccgaa ttctcagtgc gaacgtcacc
    21961 catgagcgcg gcaaggccgc gccccaatcg cgaccgtgct gcttcttccg ccatcgcggc
    22021 ctccccggcc tcctgggtca cgccggcgat ccgaatattt gttgggtcat gctctactca
    22081 caacgtgacg atttgtttgt tcagccggcg cacagttctt tttcgcgctg gatgatctcg
    22141 gtcgcgagcc gcagataggc ttcgctgccg ctgcatttga gatcgtagac cagcaccggc
    22201 ttgccgtagg acggcgcctc cga
//
LOCUS       DATMQB010000082         4139 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3123589, whole genome shotgun sequence.
ACCESSION   DATMQB010000082 DATMQB010000000
VERSION     DATMQB010000082.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4139)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4139)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4139
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3123589"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1153
                     /gene="mtaB"
                     /locus_tag="VNY79_02720"
     CDS             <1..1153
                     /gene="mtaB"
                     /locus_tag="VNY79_02720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA
                     (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-
                     methylthiotransferase MtaB"
                     /protein_id="HWX71393.1"
                     /translation="NTCAVTAEAVRQARQAIRALRRERPQSKIVVTGCAAQTEPQTFV
                     AMAEADRVLGNAEKLSAAAWTRTAAAFGLDDAPKAIVNDIMAVNETAAHLIEAFDGRT
                     RAFVQVQNGCDHRCTFCIIPFGRGNSRSVPMGAVVEDVRRLVANNYCEVVLTGVDITS
                     YGAGLPGAPKLGTLVKQILKHVPELKRLRLSSIDSIEVDPDLIDALAHESRLMPHLHL
                     SLQAGDDLILKRMKRRHSRADAIAFCNTVRRVRPDVVFGADLIAGFPTETEDMFLRSL
                     DLVAECGLTQLHVFPFSPRPGTPAARMPQLDRCIVKERARRLRERGVLALRAHLEAEV
                     GARRRVLVETHERGRTEQFTPVRLSMRAAPGTILDLHMAGHDGRQLLAG"
     gene            complement(1234..2106)
                     /locus_tag="VNY79_02725"
     CDS             complement(1234..2106)
                     /locus_tag="VNY79_02725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pseudouridine synthase"
                     /protein_id="HWX71394.1"
                     /translation="MTPEQMVSRLLYRDGLMLVIDKPAGLAVHRGPNGGESLEDHFDA
                     LRFGLPRAPALAHRLDRDTSGCLVLGRHRKALAKLGRLFKSGAVGKTYWAVVEGTPDA
                     EAGVVELPLGRLDETRGWWMKHDPQGQPAVTKWEVLGHSSLTSPWRGEVDLPKAGRVG
                     VSDPRASPHPDGFAVDPPPPGEGVKLTWLALEPLTGRTHQLRVHCAEMGWPILGDAIY
                     GRAPRSGGPPLHLHAREIVVPLYKNRAPIAVTAPVPPQMHAVLEKCGWEREQEEFSTT
                     VIPGPEQSEGARNP"
     gene            2146..3108
                     /gene="ftsY"
                     /locus_tag="VNY79_02730"
     CDS             2146..3108
                     /gene="ftsY"
                     /locus_tag="VNY79_02730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005047 - signal recognition particle
                     binding [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HWX71395.1"
                     /translation="MNDSTPGNWWQRLTGGLRRSSSALGSAISDLVTKRMLDEATIAE
                     IEDVLIRADLGLDTAARVADALSEGRYDAEISPEEVKAVVATEVEKALAGVAQPLAID
                     PAKKPFVILVVGVNGSGKTTTIGKLAAKFRAEGRAVMLAAGDTFRAAAIDQLKIWSER
                     TGAAFIAREAGSDAAGLVFDALRAAKERGIDVLLVDTAGRLQNRTELMDELHKIVRVM
                     KKVDPAAPHAVLLVLDATVGQNALSQVDIFRKTVGVTGLAMTKLDGTARGGILVAIAA
                     KFPVPVHFIGVGESVDDLAPFSARDFARAIAGADSNLSAQPDVR"
     gene            3233..3811
                     /locus_tag="VNY79_02735"
     CDS             3233..3811
                     /locus_tag="VNY79_02735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012493981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation protein A"
                     /protein_id="HWX71396.1"
                     /translation="MTATAKPQLNPALKLALDLGPLVLFFFANSRYGIFAATATFMVA
                     VLAALAASYALTRHLPIMPVVTAIIVLVFGGLTLLLHNETFIKIKPTVLYALFGAVLL
                     GGLLFGKSLLGVLFDSLFHLTEEGWRKLTLRWAIFFLVLAVLNEIVWRNTSTDTWVNF
                     KVFGFLPLTLLFGALQYPLLQKYAAEPAPAKE"
     gene            complement(3935..>4139)
                     /locus_tag="VNY79_02740"
     CDS             complement(3935..>4139)
                     /locus_tag="VNY79_02740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HWX71397.1"
                     /translation="GRYGNPFVAAGADQSGRAAIEWGVYGVPETFVIGRDGRIAYKLV
                     GAITPANSPVLKAEIDKALAAGS"
BASE COUNT          643 a         1414 c         1353 g          729 t
ORIGIN      
        1 caacacctgc gccgtcaccg ccgaggccgt gcgccaggcg cggcaggcga tccgcgcgct
       61 gcgccgcgaa cgcccgcagt cgaagatcgt ggtcaccggc tgcgcggcgc agaccgagcc
      121 gcagactttc gtcgccatgg cggaagccga tcgtgtcctc ggcaacgcag aaaagctcag
      181 cgcggcggcg tggacgcgga ccgcggccgc tttcggcctc gacgacgcac cgaaggcgat
      241 cgtcaacgac atcatggcgg ttaacgaaac cgccgcgcac ctgatcgagg ccttcgacgg
      301 ccgcacgcgc gccttcgtcc aagtgcagaa cggctgcgat caccgctgca cgttctgcat
      361 tattcccttc ggccgcggca attcacgctc ggtgccgatg ggcgcggtgg tcgaggacgt
      421 gcggcggctc gtcgccaaca actactgcga ggtcgtgctc accggtgtcg atatcaccag
      481 ctacggcgcc ggcctgccgg gcgcgccgaa gctcggcacg ctggtcaagc agatcctcaa
      541 gcacgtgccg gagctcaagc gactgcgcct gtcgtcgatc gactcgatcg aagtcgatcc
      601 cgacctcatc gacgcccttg cgcacgaaag ccggctgatg ccgcatctgc atctgtcgct
      661 gcaggccggc gatgatctca ttctcaagcg gatgaagcgc cggcactcgc gggccgacgc
      721 gatcgcgttc tgcaacacgg tccgccgggt gcggccggac gtggtgttcg gcgccgatct
      781 gatcgccggc ttcccgaccg aaacggagga tatgttcctg cgctcgctcg acctcgtggc
      841 cgaatgcggc ttgacgcagc tgcatgtgtt tccgttctcg ccgcggccgg gcacgccggc
      901 ggcgcgcatg ccgcagctcg accgttgcat cgtgaaggaa cgcgcgcggc gcttgcgcga
      961 gcgcggcgtg ctggcgctac gggctcatct cgaagcagag gtcggcgcgc ggcggcgcgt
     1021 cctggtcgag acgcatgagc gcggccgcac ggagcagttc accccggtga ggctctctat
     1081 gcgcgcggcg cctggcacga ttctcgacct gcacatggcc ggccacgacg gccggcaatt
     1141 gctggcaggt tgattcaagt cgtcattccg gggcgcgcga agcgcgagcc cggaatccat
     1201 agtcacagca gtcgcagaac catttttcgg tggctatgga ttccgggctc cctcgctttg
     1261 ctcgggcccc ggaatgacgg ttgtcgagaa ttcctcctgc tctcgctccc atccacactt
     1321 ctcaagcacg gcgtgcatct gcggcggcac cggcgccgtc actgcgatcg gcgcgcggtt
     1381 cttgtagagc ggtacgacga tttcgcgggc gtgcagatgg agcggcggcc cgccgctgcg
     1441 cggggcgcgg ccgtagatcg cgtcgccgag gatcggccag cccatttccg cgcagtggac
     1501 ccggagctgg tgcgtgcggc cggtcagcgg ttcgagcgcg agccaggtca atttgacacc
     1561 ctcccctgga gggggagggt cgacggcgaa gccgtcgggg tggggcgagg cgcgagggtc
     1621 actcaccccc acccgacctg ccttcggcag gtcgacctcc cccctccagg gggaggtaag
     1681 ggacgaatgt cccaacacct cccacttcgt caccgccggc tggccttgag gatcgtgctt
     1741 catccaccag ccgcgcgttt cgtcgagccg gccgagcgga agttcgacga cgcccgcttc
     1801 cgcgtccggc gtcccttcga ccacggccca ataggtctta ccgacggcgc cgctcttgaa
     1861 caggcggccg agcttcgcca acgccttgcg gtggcggccg agcaccaggc agccggaggt
     1921 gtcgcggtcg agccggtgcg ccagcgccgg cgcccgcggt agcccgaagc gcagggcgtc
     1981 gaaatgatct tccaggcttt cgccgccgtt cggcccgcgg tgcaccgcca ggcccgccgg
     2041 cttgtcgatc accagcatca gcccgtcgcg gtaaaggagg cgcgacacca tctgttccgg
     2101 ggtcatggtt gcctcccctg gcggaaccgc tatcacgagc gcggcatgaa cgacagcaca
     2161 ccgggcaatt ggtggcagcg cctgaccggc gggttgcggc gcagttcctc ggcgctgggc
     2221 agcgctatca gcgatctcgt caccaagcgc atgctcgacg aggcgacgat tgccgagatc
     2281 gaggacgtgc tgattcgcgc cgacctcggc ctcgacaccg ccgcccgtgt tgccgacgcg
     2341 ctgagtgaag gccgctacga cgccgagatt tcacccgagg aagtcaaggc ggtggtggcc
     2401 acggaggtcg agaaggcgct cgccggcgtg gcgcagccgc tcgccatcga cccggcgaag
     2461 aagcccttcg tcatcctcgt cgtcggggtc aacggctccg gcaagaccac gaccatcggc
     2521 aagctcgcgg ctaagttccg cgccgaaggc cgcgccgtga tgctggcggc tggcgacacc
     2581 ttccgcgccg ccgccatcga ccagctcaag atctggagcg agcgcaccgg cgcggctttc
     2641 atcgcgcggg aagccggcag cgatgccgcc ggtctcgtgt tcgacgcgtt gcgcgcggcg
     2701 aaggaacgcg gcatcgacgt gctgctcgtc gacaccgccg gccgcctgca gaaccgcacc
     2761 gagctgatgg acgaattgca caagatcgtt cgcgtgatga agaaggtcga tccggcggcg
     2821 ccgcatgcgg tgttgctggt gctcgacgcc accgtcggtc agaatgcgct gtcccaggtc
     2881 gatatcttcc gcaagaccgt gggcgtcacc ggcctcgcca tgaccaagct tgacggcacc
     2941 gcgcgcggcg gcattctcgt cgccatcgcc gcgaagtttc ccgtgccggt gcacttcatc
     3001 ggcgtcggcg agagcgtcga cgatctggcg ccgttctcgg cgcgcgattt tgcccgcgcc
     3061 atcgccggcg cggattcgaa tttgagcgcc caaccggacg tacgctaggg cgcaatcgtt
     3121 tcaagttaaa tcgattgcgc tctagttttc cctagtggag catgatcttg tcggaaaacc
     3181 ggtctccact tttcctgatc atgctctttg cccgcgagga agaagcttcg ccatgaccgc
     3241 cacggcaaaa ccgcagctca acccggctct caagctcgct ctcgacctcg ggccgctggt
     3301 cctgttcttc ttcgccaact cccgctacgg cattttcgcc gccaccgcga ctttcatggt
     3361 cgcggtgctc gcggcgctcg ccgcttccta tgcgctgacc cgccacctgc cgatcatgcc
     3421 ggtggtcacc gcgatcatcg tgctcgtgtt cggcgggctg acgctcctcc tgcacaacga
     3481 gacgttcatc aagatcaagc cgaccgtgct ctatgcgctg ttcggcgccg tgttgctggg
     3541 cggtctcctg ttcggcaaat cgctgcttgg ggtgctgttt gattcgctgt tccacctcac
     3601 cgaggaaggc tggcgcaagc tgacgctgcg ctgggcgatc ttcttcctcg tgctcgctgt
     3661 gctcaacgag attgtctggc gcaacacctc gaccgacacc tgggtcaatt tcaaggtgtt
     3721 cggcttcctc ccgctcacgt tgctgttcgg cgcgctgcaa tatccgctgc tgcagaaata
     3781 tgccgcggag ccggcgccgg cgaaggagta gcgcggcggt catttctgat tcgccaagag
     3841 gcgaatggtg gcggtgatac agctatcgtg gattgcttcg tccctctttg ggctcctcgc
     3901 aatgacggct ctggatcaac caaaacagca ggctttagga acccgccgcc agcgccttgt
     3961 cgatctcggc tttgaggact gggctgttgg cgggggtgat cgcgccgacc agcttgtagg
     4021 cgatgcggcc gtcgcggccg atgacgaacg tctccggcac gccgtagacg ccccactcga
     4081 tcgcggcgcg gccgctctgg tccgcgccgg cagcgacgaa cggattgccg tagcggccc
//
LOCUS       DATMQB010000083         2178 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_644148, whole genome shotgun sequence.
ACCESSION   DATMQB010000083 DATMQB010000000
VERSION     DATMQB010000083.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2178)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2178)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2178
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_644148"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..972
                     /gene="kdpA"
                     /locus_tag="VNY79_02745"
     CDS             <1..972
                     /gene="kdpA"
                     /locus_tag="VNY79_02745"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HWX71398.1"
                     /translation="FENPTAFSNYVQMISIFALGAALTNVFGRMVGNQRQGWAVLAVM
                     GVLFIAGVIVCYAAEAHGNDALNALGLTGGNTEGKEVRFGIAASALFAVITTAASCGA
                     VNTMHDSLTALGGMIPLINIELGEIIVGGVGSGMYGMLLFVIISIFVAGLMVGRTPEY
                     VGKKIEAKEVKMAMLAILILPLMYLGWTAVAMLVPPAVAAMNNPGPHGFTEVLYAYTS
                     QTGNNGSAFAGLSANAVFYNLTGAIAMGVGRFWMIIPTMAIAGSLAAKKSVPASAGTF
                     PTTGGLFIGLVVGVIVIVGGLTFFPALALGPIVEQLAISAGTLFSAN"
     gene            990..>2178
                     /gene="kdpB"
                     /locus_tag="VNY79_02750"
     CDS             990..>2178
                     /gene="kdpB"
                     /locus_tag="VNY79_02750"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0031004 - potassium ion-transporting
                     ATPase complex [Evidence IEA];
                     GO_function: GO:0008556 - P-type potassium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006813 - potassium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HWX71399.1"
                     /translation="METSTLRKRMPVSALFDPKIVVPAIGSAFVKLDPRTLMKNPVMF
                     VLEVVTALTTVILIRDLIIGGEHIGFEFQIILWLWFTVLFANFAEAIAEGRGKAQADT
                     LRRQRTETQAKLITGSGDQQNYRLVPSTGLKVGDVVLVEAGDLIPSDGDVIEGMASVN
                     EAAITGESAPVIRESGGDRSAVTGGTLVLSDWIRVRITAAPGSTFLDRMIRLVEGAER
                     QKTPNEIALNILLIGLTIIFVFATATIPSYVAYAGGTISVVILVALFVTLIPTTIGAL
                     LSAIGIAGMDRLVRFNVLAMSGRAVEAAGDVDTLLLDKTGTITLGNRQATEFKPLRGV
                     TEQELADAAQLASLADETPEGRSIVVLAKEKYGIRGRELADMQARFIPFSAQTRMSGV
                     EVGS"
BASE COUNT          365 a          730 c          674 g          409 t
ORIGIN      
        1 ttcgaaaatc cgaccgcctt ttccaactat gtgcagatga tctcgatctt tgcgctcggc
       61 gctgcgctga ccaacgtctt cggtcgcatg gtcggcaacc agcggcaggg ctgggccgtg
      121 ctcgcggtca tgggcgtcct cttcatcgcc ggcgtgatcg tctgctacgc ggcggaggcg
      181 cacggcaacg acgcgctcaa cgcgctcgga ctgaccggcg gcaacacgga gggcaaggaa
      241 gtccgcttcg gaatcgccgc ctccgccctg ttcgccgtca tcaccaccgc ggcctcgtgc
      301 ggcgccgtga acaccatgca cgattcgctg accgcgctcg ggggcatgat cccgctcatc
      361 aacatcgaac tcggcgagat catcgtcggc ggcgtcggct ccggcatgta cgggatgctg
      421 ctcttcgtca tcatctcgat cttcgtcgcc ggcctgatgg tgggccgcac gcccgaatac
      481 gtgggaaaga agatcgaggc gaaggaagtc aagatggcga tgctggccat cctcatcctg
      541 ccgctgatgt atctcggctg gaccgccgtc gccatgctgg tgccgccagc ggtcgccgca
      601 atgaacaatc ccgggccgca cggcttcacc gaagtcctct acgcctacac ctcgcagacc
      661 ggcaacaatg gctccgcttt cgccgggctc agcgccaacg cggtgttcta caatctcacc
      721 ggcgcgatcg cgatgggggt cggacggttc tggatgatca tcccgaccat ggcgattgcc
      781 ggctcgctcg ccgccaaaaa atcggtgccg gcatctgcgg gcacattccc caccacgggt
      841 ggtttgttca tcggcctcgt tgtcggcgtg atcgtgatcg ttggcggcct caccttcttc
      901 ccggcactcg cgctcggccc gatcgtcgag cagcttgcga tcagcgccgg cacgctcttc
      961 tctgccaatt aggcccggag tcatttgcga tggaaacctc gaccctgcgc aagcgcatgc
     1021 ccgtttcggc gctgttcgat ccgaagatcg tcgtgccggc gatcggctcc gccttcgtca
     1081 agctcgatcc gcgcacgctg atgaagaacc cggtgatgtt cgtcctcgag gtcgtcactg
     1141 cgctgaccac ggtgatcctg atccgcgatc tcatcatcgg cggcgaacac atcggcttcg
     1201 agttccagat catcctgtgg ctgtggttca ctgtgctgtt cgccaacttc gccgaagcca
     1261 tcgccgaggg acgcggcaag gcgcaggcgg acacgctgcg ccgtcagcgc accgaaaccc
     1321 aggccaagct gatcaccggg tccggcgacc agcagaatta ccggctcgtg cccagcaccg
     1381 gactcaaggt cggagacgtc gtcctcgtcg aagccggcga cctcattccg tccgacggcg
     1441 acgtgatcga aggcatggct tcggtcaacg aggcggcgat caccggtgaa tccgcgccag
     1501 tgatccgcga gtcgggcggc gatcggtccg cggtcaccgg tggcactctg gtgctttccg
     1561 actggattcg cgtgcgcatc acggcggcgc cgggctcgac cttcctcgac cgtatgatca
     1621 ggctggtcga gggcgccgaa cggcaaaaaa ccccgaacga gatcgcgctc aacattctgc
     1681 tcatcggctt gaccatcatc ttcgtgttcg caacggcgac aatcccgagt tatgtcgcct
     1741 acgccggcgg cacaatctcc gtcgtgatcc tggtcgcgct gttcgtgacg ttgatcccga
     1801 caacgatcgg ggcgctcctt tcggccatcg gcattgccgg catggaccgc ctggtgcgct
     1861 ttaatgtgct cgccatgtcc ggccgcgccg tcgaggccgc gggcgacgtc gatacgttgc
     1921 tgctcgacaa gaccgggacg atcacgctcg gcaatcgtca ggcgaccgag ttcaagccgc
     1981 tgcgcggcgt aaccgagcag gaattggcgg acgcggcgca attggcatca cttgccgacg
     2041 agacgccgga ggggcgctcg atcgtcgtgc tggccaagga gaagtacggc atccgcggcc
     2101 gcgagctcgc cgacatgcaa gcccgcttca ttccgttcag cgcccagacg cgcatgagcg
     2161 gtgtcgaggt cggctcgt
//
LOCUS       DATMQB010000084         2154 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2504145, whole genome shotgun sequence.
ACCESSION   DATMQB010000084 DATMQB010000000
VERSION     DATMQB010000084.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2154)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2154)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2154
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2504145"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            191..>2154
                     /locus_tag="VNY79_02755"
     CDS             191..>2154
                     /locus_tag="VNY79_02755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HWX71400.1"
                     /translation="MPPAQAPATDIAASERRHPLRFVWQMDADGRFAIGSDEFIELMG
                     PRTTSAFGRLWSEIAAELNLDPDNQVARAVATHETWSSITLSWPVDESRERLAVELSG
                     LPVFDRNRNFRGYRGFGVLRDIARTNQLARARRERPMGFGAQPEAPTERDGASASPAS
                     PIAPRADTPPADTPLAHTQPADTQAAAPAPPVAATPEPPSPSAAAAAPPPAPAEIAPR
                     AERPVADAAAANVVPFRSGAPTDAKAPSLSPVERKAFRELAQELNARLRGDETPEAED
                     GSAAPAAEEQRAPAEAAEDQAAPPTNQDLAPTTIAAAAEPVAANAPAIASPRGDDAEA
                     APPAAFSAFEPVLLDRLPVGVLLHQHDTLLYANRRFLEWTGHENLATLAAAGGLATLF
                     ADPGAAALAPGGSARPLLLAARGGDSVPVEGRLFTVPWRDGSALALVLASREMEQERR
                     AIAAALDAAEGQISELKARLQSLDKTEEELRAAKREAHKAATEKADFLAKVSHEIRTP
                     LNAITGFAEVIMAEHFGPIGNERYRDYLKDIHVAGTHLVSLLNDLLDLSKIETGQLDL
                     TFAPVGLNELTQQCVGIMQPQASRARIIIRTSLTPGLPQVKADERSLRQIVLNLLANS
                     IKFTGPGGQVIVSTACADSGETVLRVRDTGV"
BASE COUNT          333 a          819 c          711 g          291 t
ORIGIN      
        1 gccaagttct cggtccgtcc aggaggtgcc cgccaccgcg cccgcttcct tgcacgttga
       61 agcaccgcca agtcctcagg cgcacgtagg cgaggcgtcc gctgtcgccg cgccatcggc
      121 ctcgccatcg gaagcgctca cgaacggtgc ggcgccggcg gaggcaaacg ccggcaccat
      181 ccagctggtc ttgcctcctg cccaagctcc cgcaaccgac atagcggcga gcgagcgccg
      241 ccatccgctg cgcttcgtct ggcagatgga tgcggatggc cgcttcgcca tcggctcgga
      301 cgagttcatc gagctcatgg ggccgcgcac gacgtcggcg ttcggccggc tgtggagcga
      361 gatcgccgcc gaactgaacc tcgatcccga caaccaggtg gcgcgcgcgg tcgcgacgca
      421 cgagacctgg agcagcatca cgctgtcgtg gccggtcgac gagtcgcgcg agcggctcgc
      481 ggtcgagctg tcgggacttc cggtgtttga tcgcaaccgc aattttcgcg gctatcgcgg
      541 cttcggcgtg ttgcgcgaca tcgcccgcac caaccagctg gcgcgcgccc gccgcgagcg
      601 accgatggga tttggcgccc agcccgaagc gccgaccgag cgcgacggcg cgtcagcatc
      661 gccggcttcg ccaatcgcac cgcgtgccga caccccgcct gccgacaccc cgcttgccca
      721 tacgcaacct gccgacacgc aagctgccgc gcccgctccg cctgtcgccg caacaccgga
      781 gccgccctcg ccgtccgctg ccgctgcggc gccaccgccc gccccggcgg aaatcgcgcc
      841 gcgcgccgag cgcccggtag ccgatgccgc tgcagcaaac gtggtgccgt tccgttcggg
      901 ggcgccgacc gacgccaagg cgccgagtct cagtccggtc gagcgcaagg cgttccgcga
      961 gctggcgcag gagctgaacg cgcgcttgcg cggcgacgag acaccggagg ccgaagacgg
     1021 ttccgctgcg cccgccgccg aagagcaaag agcaccggcc gaggccgcgg aggatcaagc
     1081 agcgccgccg acgaaccagg acttggcgcc gacgactatt gccgccgcgg cggagcccgt
     1141 cgcggcgaac gctcccgcca tcgcatcgcc gcgcggtgac gatgcggagg ccgcgccgcc
     1201 ggctgcgttt tccgctttcg agccggtgct gctcgaccgc ctgcccgtcg gcgttctgct
     1261 gcaccagcac gacacgctgc tctatgccaa ccgccgcttc ctcgaatgga ccggccatga
     1321 gaatctcgcc acgctggcgg cggccggcgg cctggctacg ctctttgccg accccggcgc
     1381 cgccgcgctc gcgccgggcg ggtcagcgcg gccgctgttg ctcgcagccc ggggcggcga
     1441 cagcgtcccg gtcgagggcc gcctgttcac cgttccctgg cgcgacggct ccgcactcgc
     1501 gctggtcctc gccagccgcg agatggagca ggagcgccgc gcgatcgcgg ccgcgctcga
     1561 tgccgccgag ggccagatca gcgaactcaa ggcccggctt cagtccttgg acaagaccga
     1621 ggaagagctg cgggcggcca agcgcgaggc gcacaaggcg gcaaccgaaa aggcggactt
     1681 cctcgccaag gtgagccacg agatccgcac gccgctcaac gccatcaccg gtttcgccga
     1741 ggtgatcatg gccgagcact tcggtccgat cggcaacgag cgctaccgcg actatctcaa
     1801 ggacatccac gtcgccggaa cgcatctggt ctcgctgctc aacgacctgc tcgacctttc
     1861 caagatcgag accggccagc tcgacctcac cttcgcgccg gtcggcctca acgagctgac
     1921 ccagcagtgc gtcggcatca tgcagccgca ggcgagccgg gcgcgtatca tcatccgcac
     1981 ctcgctgacg ccgggactgc cgcaggtcaa ggccgacgag cgctcgctgc gccagatcgt
     2041 gctcaacctc ctcgccaact cgatcaagtt caccggtccc ggcggccagg tgatcgtatc
     2101 gacggcgtgc gccgacagcg gcgagaccgt gctgcgcgtg cgcgacaccg gcgt
//
LOCUS       DATMQB010000085         6044 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2814830, whole genome shotgun sequence.
ACCESSION   DATMQB010000085 DATMQB010000000
VERSION     DATMQB010000085.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6044)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6044)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6044
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2814830"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..624)
                     /locus_tag="VNY79_02760"
     CDS             complement(<1..624)
                     /locus_tag="VNY79_02760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC family oxidoreductase N-terminal
                     domain-containing protein"
                     /protein_id="HWX71401.1"
                     /translation="MADEGAGEGEYDYIIVGAGSAGCLLANRLSADAGRRVLVLEAGG
                     RDNWIWFHIPVGYLFAIGNPRSDWCFKTEAEEGLNGRRLDYPRGKVIGGSSSINAMIY
                     MRGQAADYDHWRQLGLAGWGWDDVLPYFKRHENHFMGESDAHSVGGELRIEAPRVRWD
                     LLDAFRKAAEQAGIKSVADFNTGDNEGCCAFHVNQKRGRRWSAARAFL"
     gene            864..1655
                     /gene="modA"
                     /locus_tag="VNY79_02765"
     CDS             864..1655
                     /gene="modA"
                     /locus_tag="VNY79_02765"
                     /EC_number="7.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HWX71402.1"
                     /translation="MFQRRFVVAALAAALVIAAAAPAAAAQDKVITVFAAASMKNALD
                     DLDAAFTKKTGIKVLASYAASSALVKQIEQGAPADVYVSADLQWMDYGVEKKLVKDDT
                     GVNLLGNRLVLIAPEDTKIGNVTIAPGFDLAGLAGKGRIAVGDVRAVPAGLYAKAALE
                     KLGAWAAAEPKLAMTENVRAALLLVARGEAPLGIVYETDAKIEPAVKVVGVFPDDSHP
                     PIIYPVALTVNAKPEAAQYLAFLRTQAARSIFEGYGFSFLIKPTS"
     gene            1697..2392
                     /gene="modB"
                     /locus_tag="VNY79_02770"
     CDS             1697..2392
                     /gene="modB"
                     /locus_tag="VNY79_02770"
                     /EC_number="7.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015098 - molybdate ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter permease subunit"
                     /protein_id="HWX71403.1"
                     /translation="MFHLSPDEWTAVLLSLRISIVATVFALPFGIAVAWVLARTQFYG
                     KALLDGIAHLPLVLPPVVTGYLLLISFGRKGLIGAFLEEYFGLVFSFRWTGAALACGV
                     MGFPLMVRPIRLALEAIDRRLEDAGATLGASRPLVFLTITLPLALPGVIAGLMLCFAR
                     ALGEFGATITFVSNIPGETQTISAAIYTLLQVPGGDAKAAGLVLVAIVLALTAVIASE
                     FFARRAGMRFQGE"
     gene            2395..3081
                     /gene="modC"
                     /locus_tag="VNY79_02775"
     CDS             2395..3081
                     /gene="modC"
                     /locus_tag="VNY79_02775"
                     /EC_number="7.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015412 - ABC-type molybdate transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015689 - molybdate ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter ATP-binding protein"
                     /protein_id="HWX71404.1"
                     /translation="MLAVDVERELGTFKLTARFEAAGGVTGMFGPSGSGKTTIANMIA
                     GLLTPDRGSIALDDRVLFDAADRINVPPHRRGIGYVFQEGRLFPHLSVRQNLDYGRRM
                     SGRAANPKEFERIVTLLEIGHLVDRRPRLLSGGERQRVAIGRALLMHPHLLLLDEPLA
                     SLGSSHKREILPYLTRLRDDAHVPMIYVSHNAAELRRIATSVVRLDAGQVVAAGGLDL
                     LNDAEADALG"
     gene            3186..3623
                     /locus_tag="VNY79_02780"
     CDS             3186..3623
                     /locus_tag="VNY79_02780"
                     /inference="COORDINATES: protein motif:HMM:NF025833.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4430 domain-containing protein"
                     /protein_id="HWX71405.1"
                     /translation="MTNWLGLRDSTRYIARLAAVLLILGGGPAIVSATAAEENTVRLT
                     VDYGDGVAKTISDLAWSKGNTVLDAMKAATSRSHGISFSYTGSGASAALTKIEDVQNQ
                     GGGAGKKNWQYWVNGAYGDRSFAAFELQAQDQVLWRFATEQEK"
     gene            3629..4210
                     /locus_tag="VNY79_02785"
     CDS             3629..4210
                     /locus_tag="VNY79_02785"
                     /inference="COORDINATES: protein motif:HMM:NF042461.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6580 family putative transport protein"
                     /protein_id="HWX71406.1"
                     /translation="MLSTLPNTFRAWRALRTDLAVVAGLVGLDIAARLLPHAPDFTPV
                     AASALFAASVLRVRALSVVVPLAGMILADAWLGFYDLRIMAAVYGTLALPACAAWLSS
                     RWRRPVMIAPVLVSSSLSFFLVTNFAVWAFSPMYAANAGGLLKCYIAALPFLQNMLSG
                     NLFWGIVLFGGYWLARNVRAAKRDDRHTIAARA"
     gene            4233..5114
                     /locus_tag="VNY79_02790"
     CDS             4233..5114
                     /locus_tag="VNY79_02790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007609606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HWX71407.1"
                     /translation="MDRAPSPRSAALGLLCGTGAAFFWALGFVAARQGIEAGLSPFVI
                     ALDRFVWPGLALLPVVAADGFRDLGGLGWRRASALALFGGLPLALLAYIGYVFVPLGH
                     GGIIQPSCAALGGLILARLVLKEPLPPRRIAGALLIVVGLAVIGSEALRTMGAQGVLG
                     DLLFVLAGCFFATFGILVRRWQIAPLRAAAITSVLSLAGLPILLFSWDNLLASSFLEN
                     LMQAVVQGALTGAGATYLFARTVVLLGAGRAVLFPSLVPPFTLLVGFLALGEVPSVSQ
                     LIGLVVVVVGFQLTQKG"
     gene            complement(5208..>6044)
                     /locus_tag="VNY79_02795"
     CDS             complement(5208..>6044)
                     /locus_tag="VNY79_02795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HWX71408.1"
                     /translation="ADILYPDPGFPIYRSMIEFTGARPVPVPIREENNFAFSAEETLS
                     LITQQTRLLIVNSPANPTGGVTPKSEVDKLVAGLERHPDVAIMSDEIYDHMLYDGETH
                     VCLLQYPSIRDRLILLNGWSKTYAMTGWRLGYAVWPGKLYDYARKLAVNLHSCVNAPT
                     QYAGLAALTGPQDAVAAMVAEFDKRRKVVVKGLNGLAGMSCATPKGAFYAFPNIKRTG
                     WKAKPLASALLEDAGVALIGGPDFGVLGEGYVRVSYANSTENILRALDRIGDFLASRK
                     AA"
BASE COUNT          909 a         2028 c         1982 g         1125 t
ORIGIN      
        1 gaggaaggcg cgcgccgccg accagcgccg gccgcgcttc tggttcacgt gaaaggcgca
       61 gcagccctcg ttgtcgccgg tgttgaagtc cgccaccgat ttgatgccgg cctgctcggc
      121 tgccttgcgg aacgcgtcca acaggtccca gcgcacgcgc ggcgcctcga tccgcaactc
      181 gccgcccacg gaatgagcgt cgctttcgcc catgaaatga ttttcgtgcc gcttgaaata
      241 cggcagcacg tcgtcccacc cccagccggc aaggccgagc tggcgccaat gatcgtagtc
      301 ggcggcctgc ccgcgcatat agatcatggc gttgatcgac gacgagccgc cgatcacctt
      361 gccgcgcgga tagtcgaggc ggcggccgtt taggccttcc tccgcctcgg tcttgaagca
      421 ccagtccgac cgcggattgc cgatcgcgaa caggtaaccg acaggaatgt gaaaccatat
      481 ccaattgtcg cggccgcccg cttcgagcac gagcacacgc cgcccggcat cggcggacag
      541 ccgattggcg aggaggcagc cggcggaacc tgcgccgacg ataatgtagt cgtactcgcc
      601 ctcgccggcc ccttcgtcgg ccatggaaac cctcatatcc accaggacca tagcacgccg
      661 cccgatcagc gggcgaccgg cggacgccat gagcggcggc ctggctttgc cgtccccttc
      721 tccggttgct atgcttgatg gacgaacggc gcgctgggcg cgcgccggac gagcctggaa
      781 cggcggttct caaggcgctc gtgcacctga atgttcgcat tgtcgcgcgc ggtttgcgca
      841 cggccgaact atggagaatc gccgtgttcc agcgaagatt tgttgtggcg gctcttgccg
      901 cggctctggt gattgcggcc gcggcgccgg ccgcggcggc acaggataaa gtcatcaccg
      961 tattcgccgc cgcctcgatg aagaacgcgc tcgacgacct cgatgccgcc ttcaccaaga
     1021 agactggaat caaagtgctc gcgagctatg cggcaagctc ggccctggtg aagcagatcg
     1081 agcagggcgc gccggccgac gtctatgttt ccgccgatct ccaatggatg gactacggcg
     1141 tggagaagaa actcgtgaag gacgacacgg gcgtcaacct gctcggcaac cggctcgtgc
     1201 tgatcgcccc cgaggataca aagatcggca acgtgacgat tgcccctgga ttcgatctgg
     1261 ccggtctcgc cggcaagggg cggatcgcgg tcggtgatgt gcgcgcagtt cccgccggcc
     1321 tctatgccaa ggcggcgctg gagaagctcg gtgcatgggc agccgcagag ccgaagctgg
     1381 cgatgaccga gaacgtgcgc gccgcgctcc tcctggtcgc ccgcggcgag gccccgctcg
     1441 gcatcgtcta cgagaccgac gccaagatcg aacccgccgt gaaggtcgtc ggcgtctttc
     1501 ccgacgactc gcatccgccg atcatctatc ccgttgcgct gacggttaat gccaagccgg
     1561 aagcggcgca atacttggcg ttcctgcgca cacaggccgc ccgatcgata ttcgagggct
     1621 acggtttcag ttttctgata aagccaacgt cgtgacaaag ctctgcgcgt tccgcgcatg
     1681 acgagtcgga agggctgtgt tccacctttc tcccgacgaa tggaccgcgg tgctgctgtc
     1741 gctgcgtatc tcgatcgtcg cgaccgtctt tgcgctgccg ttcggcatcg ccgttgcgtg
     1801 ggtgctggcg cggacacagt tctacggcaa ggccctgctc gacggcatcg cgcaccttcc
     1861 gctggtgctg ccgccagtgg tcaccggcta cctgctgctc atctccttcg gacgcaaagg
     1921 actgattggc gcgttcctgg aggagtattt cggcctcgtt ttctcgttcc gctggaccgg
     1981 cgccgcgctc gcctgcggcg tcatgggctt tcccctcatg gtccgcccga tccgcctcgc
     2041 gctcgaggcg atcgaccgcc ggctcgagga cgccggcgca acgctcggcg ccagccgtcc
     2101 gctggtgttc ttgaccatca ccctgccgct cgccttgccg ggcgtgatcg ccggcctgat
     2161 gctgtgcttt gcccgggcgc tcggggagtt cggcgccacc atcaccttcg tctccaatat
     2221 ccccggcgaa acgcagacga tctccgcggc gatctacacc ttgctgcagg ttcccggcgg
     2281 cgacgccaag gcagcgggat tggtgctggt cgcgatcgtg ctggcgctca ctgcggtcat
     2341 tgcttcggaa tttttcgccc gccgcgccgg catgcgcttt caaggggaat gagcgtgctg
     2401 gccgtcgacg tggaaaggga actcggcacg ttcaagctca ccgcgcgctt cgaggcggcg
     2461 ggcggcgtca ccgggatgtt cggaccgtcg ggttcgggca agaccacaat cgcaaacatg
     2521 atcgccggcc ttttgacgcc cgatcgcggc tcgatcgcgc tcgacgaccg ggtgctgttc
     2581 gacgccgccg accgcatcaa cgtccctccg caccgacgcg ggatcggcta cgtgttccag
     2641 gaaggccggc tgtttcctca tctcagcgtc cgccagaacc tcgactatgg acggcggatg
     2701 agcgggcgcg cggccaaccc gaaggaattc gagcgcatcg tgacgctcct ggaaatcggc
     2761 cacctggtcg accggcggcc gcgcctgttg tcgggcggcg agcgtcagcg ggtcgcgatc
     2821 ggccgcgcct tgctgatgca cccgcacctc ctcctgctcg acgagccgct cgcttcgctg
     2881 ggcagcagcc acaaacgtga gatccttcct tatctgacgc ggctgcgcga cgacgcccac
     2941 gtaccgatga tctatgtcag tcacaacgcg gcagagctgc gccggatcgc tacgagcgtc
     3001 gtgcggctcg acgccggcca ggtcgtggct gcgggcggcc tcgatctgct caatgacgcc
     3061 gaagccgacg ccctcggctg ataacgcgcg ttcaaccggc cttcgtctgt gcaaccgcag
     3121 cgccacgggc tatcatgcgg cctcgccgtg gtggcgcgag gcgcggtacg catcgaaggg
     3181 acgcgatgac gaattggctc ggtctgcggg acagtacccg atacattgcg cggctggcgg
     3241 cggtgctgct cattctcggc ggcggcccgg cgatcgtttc cgccacggcg gccgaagaga
     3301 ataccgtccg cctgaccgtc gattatggcg acggggtcgc caagacgatc agcgacctgg
     3361 cgtggtcgaa gggcaacacc gtgcttgacg ccatgaaagc ggcaacgtcg cgttcgcacg
     3421 ggatctcgtt cagctatacc ggctccggcg cgtcggccgc cctcaccaag atcgaggacg
     3481 tgcagaacca gggcggcggc gccggcaaga agaactggca gtattgggtc aacggcgcct
     3541 acggcgatcg aagctttgcc gctttcgaac tgcaagcgca ggaccaggtc ctctggcggt
     3601 ttgccacaga acaggagaaa tgaggccgat gctctccact ttgccgaata ccttccgcgc
     3661 ctggcgcgcg ttgcggacag acttggccgt cgtcgccgga ctcgtcgggc tcgacatcgc
     3721 cgcgcggctc cttccgcatg cgcccgattt cacgccggtc gcggcaagcg cgctgttcgc
     3781 ggcgagcgtg ctgcgcgtgc gcgccctgtc cgttgtcgtg ccgctcgccg gcatgatcct
     3841 cgccgatgcc tggctcggct tctacgatct gcgcatcatg gcagccgtct atgggaccct
     3901 cgccctgccg gcctgcgccg cctggctgtc gagccgctgg cgccggccgg tcatgatcgc
     3961 cccggtcctg gtgtcgtcct cgctgagctt cttcctggtg acgaacttcg ccgtatgggc
     4021 cttcagcccg atgtacgcgg ccaatgccgg cgggctcctc aagtgctaca tcgccgcgct
     4081 gccgttcctg cagaacatgc tgtccgggaa tctgttctgg ggcatcgtcc tgttcggcgg
     4141 ctactggctg gcgcggaacg tgcgcgcagc gaaacgcgat gaccgtcaca ccattgccgc
     4201 acgtgcctga tccccgctgc tcgcgcgcct gaatggatcg cgcgccctct ccgcgctccg
     4261 cggcactggg tctgttgtgc ggcaccggcg ccgccttttt ctgggcgctc ggtttcgtcg
     4321 ccgcgcgcca ggggattgag gccggcctct cgccgttcgt catcgcgctc gaccgcttcg
     4381 tttggccagg cctggcgcta ctgccggtcg tcgccgccga cggcttccgt gatctcggcg
     4441 ggctggggtg gcggcgcgcg agcgcgctcg cgctgttcgg cggactaccg ctcgcgctcc
     4501 tggcctatat cggctacgtg tttgttccgc tcggccacgg cgggatcatc cagccatcct
     4561 gcgcggcact gggcggcctc atcctcgccc gcctggtgct gaaggaaccg ctgccgccgc
     4621 ggcggatcgc cggcgcgctc ttgatcgttg tcggccttgc cgtgatcggc agcgaggcgc
     4681 tgcgcaccat gggcgcgcag ggcgtcctcg gcgatctact gttcgtactg gcgggatgct
     4741 tctttgccac gttcggaatc ctggtgcggc ggtggcagat cgcgccgctg cgcgcggcgg
     4801 cgatcacgag cgtgctgtcg ctcgccggac tgccgatcct gctgttcagc tgggacaatt
     4861 tgctggcctc gagctttctc gaaaacctga tgcaggccgt cgtgcagggc gcgcttactg
     4921 gcgccggcgc gacctacctg ttcgcccgca cagtcgtgct cctcggtgcc ggacgcgcgg
     4981 tgctgtttcc ctcgctcgtt ccgccgttca cgctgttggt cgggtttctt gcgctcggcg
     5041 aggtgccgag cgtttcacag ctcatcgggc tcgtcgtggt cgtcgtcggc ttccagctga
     5101 cgcagaaggg gtgatggcac tcgcatttcg ctcgtccccg cgaaagcggg gacccaggct
     5161 ttgtcgagct gtttggattc ccgctcgcgc gggaatgagc ggaagcacta cgccgccttg
     5221 cggcttgcca agaaatcgcc gatccggtcg agcgcgcgca ggatgttttc cgtcgaattg
     5281 gcgtaggaca cgcgcacata accttcgccg agcacgccga aatccggtcc gccgatgagg
     5341 gcgacgccgg cgtcttcgag cagcgcgctg gcaagcggct ttgccttcca gccggtgcgc
     5401 ttgatgttgg gaaacgcgta gaacgcaccc ttgggcgtgg cgcaggacat gcccgccagc
     5461 ccgttgaggc ctttgaccac gaccttccgc cgcttgtcga actcggcgac catggccgcc
     5521 accgcatcct gcggaccggt gagcgcggca agcccggcat attgggtcgg agcattgaca
     5581 caggaatgca gattgaccgc gagcttgcgc gcgtagtcgt agagcttgcc cggccatacc
     5641 gcatagccga gccgccagcc ggtcatggcg taggtcttcg accacccgtt gagcaggata
     5701 agccgatcgc ggatcgaggg atattgcagc aggcagacgt gggtctcgcc gtcgtagagc
     5761 atgtggtcgt agatctcgtc cgacatgatg gcgacgtcgg gatggcgttc gagcccagcg
     5821 acgagtttgt cgacctcgga cttcggcgtc acgccgccgg tcgggttggc cggcgaattg
     5881 acaatcagca gccgcgtctg ctgcgtgatc aggctcagcg tttcctcggc ggagaaggcg
     5941 aaattgttct cctcgcggat cggcaccggc accggccgcg cgccggtgaa ctcgatcatc
     6001 gagcggtaga tgggaaagcc cgggtcggga tagagaatgt ccgc
//
LOCUS       DATMQB010000086         2574 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4054847, whole genome shotgun sequence.
ACCESSION   DATMQB010000086 DATMQB010000000
VERSION     DATMQB010000086.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2574)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2574)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2574
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4054847"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            147..800
                     /locus_tag="VNY79_02800"
     CDS             147..800
                     /locus_tag="VNY79_02800"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046820 - 4-amino-4-deoxychorismate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HWX71409.1"
                     /translation="MIVLIDNYDSFAFNLVHYLGELGAEVRVHRNDKITSAAVIAADP
                     DAIVLSPGPCTPKEAGICLDLIAAAAGKVPILGVCLGHQAIGDAFGGRVVRAPTPVHG
                     KLSAIRHSGAGIFRGINAPFQATRYHSLVVERASLPEELTVTADTEDGLIMGLAHARL
                     PVHGVQFHPESIASEYGHLLLKNFLDIAASWNAAAGRRAAAPLAPTPDRQRVRAPVH"
     gene            811..1830
                     /gene="trpD"
                     /locus_tag="VNY79_02805"
     CDS             811..1830
                     /gene="trpD"
                     /locus_tag="VNY79_02805"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004048 - anthranilate
                     phosphoribosyltransferase activity [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HWX71410.1"
                     /translation="MTDEVRALIGKVATGAALTREEAASAFEQVMSGEATPSQMGGLL
                     MALRVRGETVEEITGAVSAMRAKMLRVSAPPDAIDVVGTGGDASGSFNISTCAALIVA
                     GAGVPIAKHGNRALSSRSGAADVLTALGVRIDLTPDKIARCIREAGIGFMFAPAHHPA
                     MKNVAATRVELGTRTIFNLLGPLSNPAGVRRQMVGVFSRQWTQPLAQVLKNLGAERVW
                     VVHGSDGLDEITTAGPTSVAALENGTVTSFEISPEEVGLPRVKPEHLRGGDAEANANA
                     LRGVLEGTHSAFRDVALFNAAAALVVAGKANTLKEGLHLAVHAVDSGEAEGRLDRLIV
                     VSNDD"
     gene            1823..>2574
                     /gene="trpC"
                     /locus_tag="VNY79_02810"
     CDS             1823..>2574
                     /gene="trpC"
                     /locus_tag="VNY79_02810"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004425 - indole-3-glycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006568 - tryptophan metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HWX71411.1"
                     /translation="MTDVLARIGAYKREEIAAAKRQRPLARLESEARAAAAPRGFLAA
                     IERRLTAGGYALIAEIKKASPSKGLIREDFDPPALAVAYAAGGATCLSVLTDTPSFQG
                     SLDHLRAVRTACALPVLRKDFMYDAYQVLEARAAGADCILIIMAAVDGGCAAELEAAA
                     AALGMDALVEVHDEEELERALRLKSRLIGINNRNLKTFETTLASCERLARLIPPGRVI
                     IGESGIFSPDDLARLAAAGIATFLVGESLMRQ"
BASE COUNT          413 a          870 c          872 g          419 t
ORIGIN      
        1 tcgcaaggta ttttagcgcc gttgccgaag cctttggaat ccgttacgaa gatgcctcct
       61 ttcggactat tcggctgcac acgcgatgtc gcaccaggaa gggcgcatct ggcgattttt
      121 ggtcggcgac caaacgaagt acgcgaatga tcgtcttgat cgacaattac gacagtttcg
      181 ccttcaacct ggtgcactat ctcggtgaat tgggggccga ggtccgcgtg caccgcaacg
      241 acaagatcac cagcgcggcc gtcatcgctg ccgatcccga cgcgatcgtg ctttcgcctg
      301 gcccgtgcac gccgaaagag gctggcatct gcctcgacct gattgcagcg gcggccggca
      361 aagtcccgat cctcggcgtc tgcctcggcc atcaggcgat cggcgacgcc ttcggcggcc
      421 gggtggtgcg ggcgccgacg ccggtgcacg gcaagctctc cgcgatccgc cattccgggg
      481 ccggcatctt ccgcggcatc aacgcgccct tccaggccac gcgctaccat tcgctcgtgg
      541 tcgagcgcgc gagcctgccg gaggaactga ccgtgacggc ggacaccgag gacggcctca
      601 tcatggggct cgctcacgcc cgcctgccgg tgcacggcgt gcaattccat cccgaaagca
      661 tcgcctccga gtacggccac ctgctgttga agaatttcct cgacatcgcc gcgtcctgga
      721 acgcggcggc tggacggcgc gcggcggcgc cgctcgcgcc gacgcccgac cggcagcgcg
      781 tccgcgcccc ggtacattga ggacttcacc gtgaccgacg aagtcagggc gctcatcggc
      841 aaagtcgcga ccggcgccgc gctaacgcgc gaggaggcgg ccagcgcctt cgagcaggtg
      901 atgtcgggcg aagctactcc ctcgcaaatg ggcggcctcc tcatggcgct gcgcgtgcgc
      961 ggcgagacgg tcgaggagat caccggcgcg gtctcggcca tgcgcgcgaa aatgctgcgc
     1021 gtgagcgcgc cgcccgatgc catcgatgtc gtcggcaccg gcggcgacgc ttcgggctcg
     1081 ttcaatatct cgacctgcgc cgcgcttatc gtcgccggcg ccggcgttcc gatcgccaag
     1141 catggcaatc gtgcgctgtc ctcgcgctcg ggcgcggccg atgtgctgac cgcactcggc
     1201 gtcaggatcg atctgacgcc ggacaagatc gcgcgctgca tccgcgaagc gggcatcggt
     1261 ttcatgttcg cgcccgcgca tcacccggcg atgaagaacg tcgcggcgac ccgcgtcgaa
     1321 ctcggcacgc gcacgatctt caatctgctc ggccccctgt ccaatccggc cggcgtccgg
     1381 cggcagatgg tcggtgtgtt ctcgcggcaa tggacgcagc cgctggccca ggtcctgaag
     1441 aatctcggcg ccgagcgcgt ctgggtggtg cacggctcgg atgggctcga cgagatcacg
     1501 accgccgggc cgacgagcgt cgccgcgctc gagaatggca cggtgacaag cttcgagata
     1561 tcgcccgaag aggtcggctt gcctcgggtc aagccggaac atctgcgcgg tggcgatgcc
     1621 gaagcaaacg ccaatgcgct gcgtggcgtt ctcgaaggca cgcattccgc gtttcgcgac
     1681 gtggcgctgt tcaatgccgc ggccgccctg gtggtcgcgg gcaaggccaa caccctcaag
     1741 gagggactgc accttgccgt ccacgcggtc gattccggag aagccgaggg ccgactcgac
     1801 cgcctgatcg tggtctccaa cgatgactga cgtccttgcc aggatcggcg cctacaagcg
     1861 cgaggagatc gccgcggcga agcggcaacg cccgctcgcg cggctcgaaa gcgaggccag
     1921 ggccgcggcc gcgccgcgcg gcttcttggc ggcgatcgag cggcggctga cggccggcgg
     1981 ctacgcgctt attgccgaga tcaagaaggc gagcccgtcg aagggtttga tccgcgagga
     2041 cttcgatccg ccggcgctgg cggtggccta cgcggcaggc ggcgcgacct gcctttcggt
     2101 gttgaccgac actccctcct tccagggctc gctcgatcac ctgcgggcgg tgcgcaccgc
     2161 ctgcgcgctg ccggtgctgc gcaaggattt catgtacgac gcctatcagg tgctggaagc
     2221 gcgcgctgcc ggcgccgatt gcatcctgat catcatggcc gcggtcgatg gcggctgcgc
     2281 ggcggagctt gaagcggcgg cggcagcgct cggcatggac gcgctcgtcg aggtgcacga
     2341 cgaggaggag cttgaacggg cgctgcgcct gaaatcgcgg ctcatcggga tcaacaaccg
     2401 taacctgaaa acgttcgaga cgacgctcgc gagctgcgaa cgcctggcgc ggctgattcc
     2461 gcccgggcgc gtaatcatcg gcgagagcgg cattttctca cccgacgatc tcgcccggct
     2521 cgccgcggcg gggattgcaa ccttcctcgt cggcgaaagc ctgatgcggc agaa
//
LOCUS       DATMQB010000087         2256 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_335140, whole genome shotgun sequence.
ACCESSION   DATMQB010000087 DATMQB010000000
VERSION     DATMQB010000087.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2256
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_335140"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1578)
                     /locus_tag="VNY79_02815"
     CDS             complement(<1..1578)
                     /locus_tag="VNY79_02815"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HWX71412.1"
                     /translation="MDGAFEPRLEDYRLLTGAGKFQDDEATADAAWGVFVRSPHAFAD
                     IRGVDTASAQAAPGVLAVLTAAALDATGIGSVSVPVPVPGSPGMVSPHRPSLARDCVR
                     HVGDPIALVVAGSETEARDAAELVEVDYAARDAVTDVVRAAAPGAPQIWPEAPGNIAV
                     GWHPYGAKSEDRAELDRIFAGAAHIASVRLVNQRIVMAPMEPRAGVAVHEPETDRYVL
                     HVASQSAFAMRQDVARTMSVPVDKLRVVSRDVGGAFGMRASGYPEYPAMLVAAKMLGR
                     PVRWRSTRQEGFLTDNQARDTIIEGRLAMDADGKFLALDIDSIAALGAYHTSHGAFIA
                     TVNFARCLPCMYDIPAVGLRIRCLFTNTVPTGPYRGAGRPEANYCLERLVDEAARITG
                     IDRIEIRRRNLIAPARMPYKTAVGTTYDSGDFAAVFDEALASADVAGFAARRATSQAA
                     GKRRGLGVSCFLEIAGGQPGEGAAIAFPGSSKLLLAIGVQASGQGHRTVYRRLVADYL
                     GIPAEMVKVAHGDSDDEV"
     gene            complement(1984..>2256)
                     /locus_tag="VNY79_02820"
     CDS             complement(1984..>2256)
                     /locus_tag="VNY79_02820"
                     /inference="COORDINATES: protein motif:HMM:NF040438.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase domain-containing protein"
                     /protein_id="HWX71413.1"
                     /translation="IGAPERLMSLIGSTIPFPATEGQRAAKRDPRRSIAVRYPGKAAY
                     LDEVSHAAQCLIDAGYLLAEDLERILAQSARRWDLLASAPESAAAQ"
BASE COUNT          375 a          752 c          767 g          362 t
ORIGIN      
        1 cacctcgtcg tcactgtcgc catgcgcgac ttttaccatc tcggccggga tcccgaggta
       61 gtcggccacg agccggcgat agaccgtgcg gtgcccctgc ccgctcgcct gcacgccgat
      121 cgccagcagg agcttgctgg acccgggaaa ggcgatggca gcgccctcgc ccggctggcc
      181 cccggcgatc tcgaggaagc acgagacgcc gaggccgcgc cgtttgcccg ccgcttgcga
      241 cgttgcccgg cgcgccgcga aacccgcgac atcggcgctg gcgagggcct cgtcgaacac
      301 ggccgcgaaa tcgccgctgt cataagtggt tccgactgca gtcttgtagg gcatgcgcgc
      361 gggtgcgatg aggttgcggc ggcggatctc gatgcgatcg atgccggtga tgcgcgccgc
      421 ctcgtcgacc agccgctcaa ggcagtaatt cgcctctggg cgccccgcgc cgcggtaggg
      481 cccggtcggc accgtgttgg tgaaaaggca tctgatgcgc agacccaccg ccgggatgtc
      541 gtacatgcac ggcaggcaac gcgcgaaatt caccgtcgcg ataaaagcgc cgtgcgaggt
      601 gtggtaggcg ccgagcgccg cgatactgtc gatgtcgagg gcgaggaact tgccgtcggc
      661 gtccatcgcg aggcggccct cgatgatggt gtcgcgcgcc tgattgtcgg tgaggaaccc
      721 ctcctgtcgg gtcgaacgcc agcgcactgg gcggcccaac atcttcgccg cgaccagcat
      781 tgccgggtat tcgggatagc cggaggcacg catgccgaac gcgccgccga cgtcgcgcga
      841 caccacgcgc agcttgtcga ccggcacact catcgtgcgg gcaacgtcct ggcgcatcgc
      901 gaaggcgctc tgcgacgcga cgtgtagtac gtagcggtcg gtttcgggtt cgtggacggc
      961 gacaccggcg cgcggctcca tcggcgccat gacgatgcgc tgattgacga gccgcacact
     1021 tgcgatgtgg gccgcgccgg cgaagatgcg gtcgagttcg gcgcggtcct cggatttcgc
     1081 gccatagggg tgccagccga ccgctatatt gcccggcgcc tcgggccaaa tttgcggcgc
     1141 cccgggcgcg gcggcgcgga cgacgtcggt gacggcgtca cgcgcggcgt aatcgacctc
     1201 gaccagctcg gccgcatcgc gagcctcagt ctcgctcccg gcgacgacga gcgcgatggg
     1261 atcgccaaca tggcgcacgc agtcgcgggc gagcgagggc cggtgcggcg acaccatgcc
     1321 ggggctgccc ggtaccggga ccggaacgga caccgagccg atgccggtcg cgtcgagagc
     1381 ggcggcggtc agcaccgcga gtacccccgg cgccgcctgg gcggacgcag tgtcgacgcc
     1441 gcgaatgtcg gcgaacgcat gcggtgagcg cacgaacacg ccccaggccg cgtcggcggt
     1501 cgcctcgtca tcctggaatt tgccggcgcc ggtcagaagc cggtaatcct ccagccgagg
     1561 ctcgaacgct ccgtccattc tatcgttttg ctccatggcg gcggttttga tccccatcga
     1621 ttacttcgag accgacattc gccagatgcc gaccagtttc gagtaagagg tcgcggcctt
     1681 tgaacgcttt gatcaacggc aaatcgccgt ccctaagacg aaggtcggtt cgaagccagc
     1741 ggttgacgcc gagctgtacc ctgaaatcca cgattttcag ccctaagcta acgccaggtt
     1801 cgggggcatg aagactggtt tcctgccgga gagcctgaac ggcggcagtc ggtcaagtaa
     1861 agagaccttc accgaaatac gccgcgccgg ctcggaaacg ccgattccag ccgctgatga
     1921 catcgccctc gtcactacgc cgccggatga acgacccctg gaattgaacg atctgactcc
     1981 ttgctattgc gcggcggcgg attccggcgc agatgcgagc agatcccagc ggcgggccga
     2041 ctgcgcgaga atgcgctcca agtcctccgc caacaggtag ccagcgtcga tcaggcactg
     2101 tgcggcgtga cttacctcgt cgaggtaggc ggccttgccg ggatagcgta ccgcgatcga
     2161 ccggcgcggg tcgcgtttcg ctgcgcgttg gccctcggtg gccgggaacg ggatcgttga
     2221 cccgatcagg ctcatcaacc gctcaggtgc gccgat
//
LOCUS       DATMQB010000088         4284 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_956527, whole genome shotgun sequence.
ACCESSION   DATMQB010000088 DATMQB010000000
VERSION     DATMQB010000088.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4284)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4284)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4284
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_956527"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..301)
                     /locus_tag="VNY79_02825"
     CDS             complement(<1..301)
                     /locus_tag="VNY79_02825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71414.1"
                     /translation="MHLLATTSTNLDEIVEAVDLGQPPGEIVVLSFADSDLAGLAAAW
                     EAERTVLPSVRLAHLRDLRHPMSVDLWIDRVAAHARVIVVRLLGGLDWWRYGIERL"
     gene            complement(318..1361)
                     /gene="cobW"
                     /locus_tag="VNY79_02830"
     CDS             complement(318..1361)
                     /gene="cobW"
                     /locus_tag="VNY79_02830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006203259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein CobW"
                     /protein_id="HWX71415.1"
                     /translation="MNGSRQSLARVPCTIVTGFLGAGKTTLIRHVLANAQGRRLAVIV
                     NEFGDVGIDGEILKGCGNEACPEENIVELANGCLCCTVADEFVPALDAILARDGVEHI
                     VIETSGLALPKPLVQAFHWPAIKSRVTVDGVVVVVDGAALASGRVADDLDALARQRAA
                     DSALAHDDPVEEVFDDQIACADLVVLNKRDLIDAAGIAKAQAAIASVLPRSVKVITVA
                     DGKVDQALLLGLGVGTEDDIANRRTRHDDEPEHDHDDFDSFVVPLGEIADPSALAARV
                     AALAGNFDVLRVKGFAAVAGKPLRLLVQAVGPRVTHQYDRPWAAAAPRDGRLVVIGLK
                     GLDRAAVTRALIG"
     gene            complement(1358..1753)
                     /locus_tag="VNY79_02835"
     CDS             complement(1358..1753)
                     /locus_tag="VNY79_02835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003505282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1636 domain-containing protein"
                     /protein_id="HWX71416.1"
                     /translation="MTDRAAAAADAPTIYVCVTCRPVGEPDSELRPGAVLAAAVERAA
                     AGTEVIVRPMRCLANCSRGPSAALRCNGSWTYVFGGLDPAFAGALVEGARLLARAADG
                     ILPWRGRPEPLKRGLIARVPPIGFEEVDA"
     regulatory      complement(1845..2045)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     regulatory      2111..2307
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            2342..2521
                     /locus_tag="VNY79_02840"
     CDS             2342..2521
                     /locus_tag="VNY79_02840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbtB-domain containing protein"
                     /protein_id="HWX71417.1"
                     /translation="MSTLIRSVALPDARRDAMRYGLAAILLGTLFIGVTGFAPLQALH
                     DAAHNTRHAISFPCH"
     gene            2532..3278
                     /locus_tag="VNY79_02845"
     CDS             2532..3278
                     /locus_tag="VNY79_02845"
                     /inference="COORDINATES: protein motif:HMM:TIGR02458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbtA family protein"
                     /protein_id="HWX71418.1"
                     /translation="MFRRIFAAALGAGIGVGVLIAALQQVALVPMILEAEKYEKGTVA
                     PHHEHGAISTQSGMAVASLLVTEAKAHDHEADAPMVAEDSPWRPVFTWMATTLTSVGF
                     ALLLVGAYAVSGRAVDAREGLLWGIAGFAAFALAPAFGLPPELPGSVAADLFPRQAWW
                     IGTAVATAAAIGLMLFARASWAIPGGVALLVAPHVIGAPHPPAGAGLVPAELAAAFAA
                     RSLGINAAFWALLGLATGALYARLGRTAET"
     gene            3290..3808
                     /gene="cobU"
                     /locus_tag="VNY79_02850"
     CDS             3290..3808
                     /gene="cobU"
                     /locus_tag="VNY79_02850"
                     /EC_number="2.7.1.156"
                     /EC_number="2.7.7.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008596010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0043752 - adenosylcobinamide kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
                     /protein_id="HWX71419.1"
                     /translation="MRTLVLGGARSGKSRYAESLIEGLPPPWAYVATAEAGDDEMAAR
                     IKAHRARRGAEWRTVEAPCDLAAALAACGRMPVLVDCLTLWLSNLMLAEADIDAEVER
                     LETALAAAAAPVVLVANEVGSGIVPDHPLGRRFRDLQGTFNQRLAAGADRVVLMVAGL
                     PLAVKGAAKETS"
     gene            3805..>4284
                     /locus_tag="VNY79_02855"
     CDS             3805..>4284
                     /locus_tag="VNY79_02855"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013531120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HWX71420.1"
                     /translation="MTETTDKAEAERHRAKMAKRKAVQDAEVAGKTIEKGLLIVHTGT
                     GKGKSTAAFGLALRMLGRGHRIGVVQFIKGAWHSAERDALVRFGDQVAWHTMGEGFTW
                     DTQDRARDIAAAERAWAKARELMADPSFSLVILDELNIALRYDYLDLGAVVAALAARR
                     "
BASE COUNT          636 a         1483 c         1492 g          673 t
ORIGIN      
        1 acagccgttc gatgccgtat cgccaccaat cgaggccgcc gagcaggcgc acgacgatca
       61 ccctggcgtg ggcggcgacg cggtcgatcc acagatcgac cgacatggga tggcgcaggt
      121 cgcgcagatg cgcgagccgc acgctcggca gcacggtgcg ttccgcttcc cacgccgcgg
      181 caaggccggc gaggtcgctg tcggcgaacg agagcacgac gatctcgccc ggcggctggc
      241 cgagatcgac cgcttcgacg atttcgtcga ggttggtcga agtcgtcgcc aacagatgca
      301 tcgtccgccc cgacggctta cccgatcagc gcgcgcgtca ccgccgcgcg atcgaggccc
      361 ttgagcccga tcaccaccag ccggccgtcg cgcggcgcgg cggcggccca tggccggtcg
      421 tattgatgcg tcacccgcgg tcccaccgcc tgcaccagca gacgcagcgg cttgcccgcc
      481 acggcggcga aacccttgac gcgcagcacg tcgaaatttc ccgcaagtgc ggcgacgcgg
      541 gcggcgagcg cggacggatc ggcgatctcg ccgagcggca cgacgaacga atcgaaatcg
      601 tcgtgatcgt gctccggctc atcgtcgtgc cgcgtgcggc ggttggcgat gtcgtcctcg
      661 gtgccgacgc cgagtccgag cagcagcgcc tgatcgacct tgccgtcggc gaccgtgatc
      721 accttgacgc tgcgcggcag tacgctggcg atcgccgcct gcgccttggc gatgcccgcc
      781 gcatcgatga ggtcgcgttt gttgaggacg acgagatcgg cgcaggcgat ctgatcatcg
      841 aatacttcct cgaccggatc gtcgtgcgcg agcgcgctgt cggcggcgcg ctgtcgggcc
      901 agggcgtcga ggtcgtcggc gacgcggccg ctggccagcg ccgcgccgtc gacgacgacc
      961 acgacgccgt ccacggtgac gcggctcttg atcgccggcc aatggaaggc ctggaccagc
     1021 ggcttcggca gagcgaggcc cgaggtctcg atcacgatat gctcgacgcc gtcgcgcgcc
     1081 aggatggcgt cgagcgccgg tacgaattcg tccgccaccg tgcagcacag gcagccgttg
     1141 gccaattcaa cgatgttctc ctcggggcag gcctcgttgc cgcagccctt gaggatttcg
     1201 ccgtcgatgc cgacgtcgcc gaactcgttg acgatgacgg cgaggcggcg gccctgcgcg
     1261 ttcgccagca cgtgccggat cagcgtcgtc ttgccggcgc cgaggaagcc ggtgacgatg
     1321 gtgcagggaa cgcgcgcaag gctttgccgc gaaccgttca tgcatcaacc tcctcgaatc
     1381 cgatcggcgg gacgcgggcg atcaggccgc gcttgagcgg ctccggccgt ccccgccagg
     1441 ggagaatgcc gtcagcggcg cgcgcgagca gccgcgcgcc ctcgaccagc gctccggcaa
     1501 aagccgggtc gaggccgccg aaaacgtagg tccacgagcc gttgcagcgc agcgcggcgc
     1561 ttgggccgcg cgagcaattg gcaaggcagc gcatcgggcg cacaatcact tccgttccgg
     1621 cggcggcgcg ttcgaccgcc gcggcgagca cggcgccggg acgcagttcg ctgtcaggtt
     1681 caccgacggg ccggcaggtg acgcacacat agatggtcgg cgcgtcggcc gccgcggccg
     1741 cgcgatctgt cacgctcggt tgatcgcaag aactcacccg cgccgctccg acatgcgtca
     1801 cggggtgcag agggtgaacg accgataccg aggcaccccg cccggccaac gaccgcatcg
     1861 acggcaggtc tcctggctcg cggcttgccg cccgttaccg ccttcccggg tgaacccagt
     1921 ggcttcggat tggcacgggc ttgccgctta cagttgcggg ggcagctgcg gattaggaac
     1981 gcgccggttc cgcaccgcat tccctattgg ctctcacatg agaggccgtc gaatagccgc
     2041 gactaaacgg tcgtcccgcg gactttgtca atggcgccac ggacgccttg cggccgcgct
     2101 ggcggccgct attattgtcg gcgctgtcgg ttcccgcatc ggcgggacgc aatagggaac
     2161 gcggtgagag cttgctcgaa gccgcggctg cccccgcaac tgtgagcggc gagcctcctc
     2221 gtcgatccac tggagcccgc tccgggaagg tcgagaccag gcgctgaccc gcaagtcagg
     2281 agacctgccg gcggcgttgg cctctgtctc ggtcctcggg tggaggacga aggagaacga
     2341 aatgtccact ctgatccgtt cggttgcact gccggatgcg cgccgcgacg cgatgcgtta
     2401 cgggctcgcc gcgatcctgc tcggcaccct gttcatcggg gtgaccggtt tcgcgccact
     2461 gcaggcgctg cacgacgccg cgcacaacac ccgtcacgcc atcagcttcc cctgtcactg
     2521 acgggactat catgtttcgc cggatttttg cggccgcgct cggcgccggc atcggcgtcg
     2581 gcgtgctcat tgccgcgctc cagcaggttg cgctggtgcc gatgatcctc gaagcggaga
     2641 agtacgaaaa gggcacggtg gcgccgcacc acgagcacgg cgcgatctca acgcagtccg
     2701 gcatggccgt ggcctcgctg cttgtcaccg aggccaaggc gcacgatcac gaggccgacg
     2761 cgcccatggt cgccgaagac tcgccgtggc gtcccgtctt tacctggatg gcaacgacgc
     2821 tcacctcggt cggattcgcg ctgctgctgg tcggggccta tgcggtcagc ggccgcgcgg
     2881 tcgacgcacg tgaaggcttg ctgtggggga tcgccggttt tgctgcgttc gcgctcgcgc
     2941 ccgcgttcgg cctgccgccg gagctgccgg gatcggtcgc ggccgatctt ttcccccgcc
     3001 aggcgtggtg gatcggaact gccgtggcga cagccgcggc gatcgggctc atgcttttcg
     3061 cccgcgcctc ctgggccatt ccgggcggcg ttgcgctgct cgttgcgccg catgtcatcg
     3121 gcgcgccgca tccgccggcg ggcgcaggcc tcgttccggc cgagcttgcg gcggcgtttg
     3181 ctgcgcgctc gctcggaatt aacgcggcgt tctgggcatt gctcggcttg gcgaccgggg
     3241 cgctctacgc ccgtctcggc cgcaccgccg agacttgacg gcgcgccgct tgcgcaccct
     3301 cgtgctcggc ggtgcccgct ccggcaagag ccgttatgcc gaaagcctga tcgaggggtt
     3361 gccgccgccc tgggcgtacg tggcgacggc tgaggcgggc gacgacgaaa tggccgcgcg
     3421 cataaaggca caccgcgcgc gccgcggcgc cgaatggcgc acggtcgagg cgccgtgcga
     3481 ccttgccgcg gcgcttgccg cttgcgggag aatgccagtg ctggtcgatt gcctgacgct
     3541 gtggctgtca aatctcatgt tggcggaggc cgatatcgat gcggaagtcg agcgcctgga
     3601 aacggcgctg gccgcggcgg ccgcaccggt ggtcctggtc gcgaacgagg tcggctccgg
     3661 catcgtgcct gaccatccgc tcggccgccg ctttcgcgat ctgcagggca ctttcaacca
     3721 gcggctcgcc gcgggcgcgg accgggtcgt gctcatggtc gccggcctcc cgctcgccgt
     3781 gaagggcgcc gcgaaggaaa cgtcatgacc gaaacgaccg acaaggccga agccgagcgc
     3841 caccgcgcca agatggcgaa acgcaaggcg gtgcaggacg ccgaggtggc gggaaagacg
     3901 atcgagaagg gtctcctcat cgtgcacacc ggcaccggca agggaaaatc gaccgcggcc
     3961 ttcggccttg ccttgcgcat gctcggacgc ggccaccgca ttggcgtcgt gcagttcatc
     4021 aagggcgcgt ggcattcggc cgagcgcgac gcgctcgtcc gcttcggcga tcaggtcgcc
     4081 tggcacacga tgggcgaggg cttcacctgg gacacacagg accgcgcgcg cgatatcgcg
     4141 gccgccgagc gcgcctgggc gaaggcgcgc gaactcatgg ccgatccgag cttttccctc
     4201 gtcattctcg acgagctcaa cattgcgctg cgctacgact atctcgatct cggcgccgtg
     4261 gttgccgcgc tcgccgcacg ccgc
//
LOCUS       DATMQB010000089         6101 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4365671, whole genome shotgun sequence.
ACCESSION   DATMQB010000089 DATMQB010000000
VERSION     DATMQB010000089.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6101)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6101)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6101
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4365671"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1604)
                     /locus_tag="VNY79_02860"
     CDS             complement(<1..1604)
                     /locus_tag="VNY79_02860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003611234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HWX71421.1"
                     /translation="MHEPLVFDETASRAEDEWLVETRAAPSQGADLLRFVISGSVDDG
                     KSTLLGRLLYDSQRLRDDELANLVKDSARYGSRGDEIDFALLVDGLAAEREQGITIDV
                     AYRYFATRRRSFIVADTPGHEQYTRNMATGASTADVAVILLDARKGLTAQTRRHLFIV
                     SMLGIRRVVIAVNKMDLVAFARERFDLIADQCRQMTDRLDLARLDFVPVSATSGDNIV
                     NGSRAMPWYRGPTLLRLLETVPVGEERTSASFRFPVQWVTRPNADFRGYGGMIASGSA
                     APGARVICHPSGQTAAIGQILVGGKPVLRARAGQSVLLTLTADLDVARGDVIVAEAGA
                     IKLVREAQAHLFWMDDQPLRKGRSFIARIGTSTATATVAAIDHAIDVDDYREVDAEAV
                     DVNGLAGVTIAFDRPMPLVPYRECRDLGGFILIDRISNDTVALGLIVAEAGGEGKADG
                     AITRTGRRLGRLGALRDRAFARLRRTPERPLRSLFKALTWRTTGSVDTFILSFIFTGS
                     AKVSAAISGTELMTKLLLYYGHERIWA"
     gene            complement(1604..2506)
                     /gene="cysD"
                     /locus_tag="VNY79_02865"
     CDS             complement(1604..2506)
                     /gene="cysD"
                     /locus_tag="VNY79_02865"
                     /EC_number="2.7.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018426908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004781 - sulfate adenylyltransferase
                     (ATP) activity [Evidence IEA];
                     GO_process: GO:0019419 - sulfate reduction [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfate adenylyltransferase subunit CysD"
                     /protein_id="HWX71422.1"
                     /translation="MKPLSHLDWLEAESVYILREVAAECRNPVLLYSIGKDSSVLLHL
                     AAKAFYPGRIPFPVLHIDTTWKFRDMIAFRDRRAAELGLRLIVHTNRDGLVQGIDPFR
                     SGSRLYTDVMKTQALRQALDLYGFDAAIGGARRDEEKSRAKERIFSLRAPQHRWDPRR
                     QRPEPWRLYNTRLAPGESVRVFPLSNWTELDVWMYIEREEIPIVPLYFAADRPVVRRD
                     GTLLMRDDDRLELQPGETVETRKVRFRTLGCYPLTGAIESNAASVAQIVAETAGLRRS
                     ERDGRLIDHDASASMEQKKREGYF"
     gene            complement(2503..3327)
                     /locus_tag="VNY79_02870"
     CDS             complement(2503..3327)
                     /locus_tag="VNY79_02870"
                     /EC_number="1.8.4.8"
                     /inference="COORDINATES: protein motif:HMM:NF002537.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004604 - phosphoadenylyl-sulfate
                     reductase (thioredoxin) activity [Evidence IEA];
                     GO_process: GO:0019379 - sulfate assimilation,
                     phosphoadenylyl sulfate reduction by
                     phosphoadenylyl-sulfate reductase (thioredoxin) [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoadenylyl-sulfate reductase"
                     /protein_id="HWX71423.1"
                     /translation="MERVCSKPIAALDTPLPSAREPLPSDELRTRSTALAAALAPLPL
                     DQRLHLMRREVRGPIVFTTSFGLEDQVILHALRQHQIDVEIVTLDTGRLFPETHDVWM
                     ESEQRYGIRIRSIYPEHAAVEALVAAQGINGFFHSRDARVACCHVRKVEPLNRALAGA
                     TAWITGLRSGQSDARRDVGLVNVDWDRGILKFNPLFDWTREAVLSFTRERDVPVNALH
                     AKGFTSIGCAPCTRAIAPGESERAGRWWWEEDGKKECGLHERHRARATLDIAQATS"
     gene            complement(3469..4881)
                     /locus_tag="VNY79_02875"
     CDS             complement(3469..4881)
                     /locus_tag="VNY79_02875"
                     /EC_number="2.7.7.13"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007595269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004476 - mannose-6-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-1-phosphate
                     guanylyltransferase/mannose-6-phosphate isomerase"
                     /protein_id="HWX71424.1"
                     /translation="MAQPIIPLIMCGGAGTRLWPASRENRPKQFLPLFGTLSTFQETV
                     RRVADPALFARPIVVTNGQYRFLVAEQLAAIGAEADVLLEPARRDSGPAIAAGAGYAL
                     TRDDGAVVVALAADHVVTDPAAFAKVCALGRAAAEEDRIVMFGVEPTRPATEYGYIRT
                     GPSLAPGLFAIERFVEKPDAETAARYLAEGYLWNSGNFMFRARFLLDEYHRFEPDSAA
                     AVAAALAAAGTDLGFVTLGVDAFTRAAAKSIDYAVMERTTRASVMPVSYGWSDVGSWQ
                     AVWELSAHEAADNAAHGPALFVDTRGSYVATDRQFVAVLGLDNVVVVTTADAVLVARR
                     EASDGLRGVVGKLKEVAPALTEDHLKAHRPWGSYQSLDQGERYQVKRIVVKQGGRLSL
                     QMHHHRAEHWVVVRGTARVTIGDNVTFLHENESLYVPNGARHRLENPGKIDLELIEVQ
                     TGSYLGEDDIVRLEDDYHRS"
     gene            5244..>6101
                     /locus_tag="VNY79_02880"
     CDS             5244..>6101
                     /locus_tag="VNY79_02880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013912842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase arm-type DNA-binding domain-containing
                     protein"
                     /protein_id="HWX71425.1"
                     /translation="MPRTKLTKSAIDALPTLPSDTVYWDAALPGFGIKVTPKGRKVFI
                     VLYRTGGAGSKLRKYTIGPTGRVTLHQARIAAQKVFAARLDGRDPAAEKRERKRRAVA
                     DRVEDLLEAFIDQRLSQNRSGGEIARLLRREMGRAWAGRSIHEIGKRDVVEVISAIEQ
                     RGAPVAANKTLKSIKTFLRWCVGRAILDQSPAEGVPAPAKEISRDRVLSDDELAKVIF
                     AAREVDDPYCGIVELLVLTGQRREEVARLAWDELDLTQRIWTIPKSRTKNAKPHVVQL
                     SDQSIAVLRR"
BASE COUNT         1089 a         1979 c         2003 g         1030 t
ORIGIN      
        1 gcccaaatgc gctcgtgacc gtaatagagg agcaatttgg tcatcagctc ggtgccgctg
       61 atggccgccg agaccttcgc gctgccggtg aatatgaacg acaggatgaa agtatcgacg
      121 ctgccggtcg tgcgccaggt caaggctttg aacaggctgc gcagcggccg ctccggcgtt
      181 cgccgcaggc gcgcgaaggc gcggtcgcgc agcgctccca gacggccgag ccgccgcccg
      241 gtcctggtga tcgctccgtc agctttgcct tcgccgccgg cttcggcaac gatcagcccg
      301 agtgcaacgg tatcgttgct gatgcgatcg atcaggataa agccgccgag atcgcggcat
      361 tcccggtacg gcaccagcgg catcggccgg tcgaaagcga tggtcacccc ggcgaggccg
      421 ttgacgtcga cggcctcggc atccacctcg cggtagtcat caacgtcgat ggcgtgatca
      481 atcgcagcga ccgttgccgt tgccgtgctc gtgccgatac gcgcgatgaa gctgcggccc
      541 ttgcgcagcg gctgatcgtc catccagaag aggtgcgcct gcgcctcgcg gacgagcttg
      601 atcgcgcccg cttcggcaac gatgacgtcg ccgcgcgcca cgtcgaggtc ggcggtaagc
      661 gtgagcagga cggactgtcc ggcgcgcgcg cgaagcacgg gcttcccgcc gaccagaatc
      721 tgtccaatag cggccgtctg gccgctcgga tggcagatca ccctggcgcc gggcgcagcc
      781 gaaccgctcg cgatcatccc gccatatccg cggaaatccg cgttgggccg cgtcacccac
      841 tggaccggga aacgaaacga agcgctcgtg cgttcctcgc cgacggggac ggtctcgagc
      901 aggcgcagca acgtaggtcc tcgataccac ggcatcgcgc gcgagccgtt gacgatattg
      961 tcgcccgagg ttgccgaaac cggaacgaag tcgagccttg cgaggtcgag ccgatcggtc
     1021 atctgccggc attgatcggc gatcaggtcg aaccgctcgc gggcaaacgc caccaagtcc
     1081 atcttgttca ccgcgatcac gacgcggcgg atgccgagca tcgacacgat gaacagatgc
     1141 cggcgcgtct gcgcggtcag gcccttgcgc gcatcaagca ggatgacggc gacatccgcc
     1201 gtggaagcgc cggtcgccat gttgcgggta tattgctcgt ggcccggcgt atcggcgacg
     1261 atgaaagagc ggcgccgggt cgcaaagtac cggtaggcga cgtcgatggt gatgccctgc
     1321 tcgcgctcgg cggcaagtcc gtcgaccagc aaggcgaaat cgatctcgtc gccgcggctg
     1381 ccgtagcggg ccgagtcctt gaccagattt gccagttcat cgtcgcgcag gcgctgcgaa
     1441 tcatagagca accggccgag cagcgtcgac tttccgtcgt cgaccgaacc ggagatgacg
     1501 aaccggagca ggtcggcgcc ctgactcggc gccgcgcgcg tttcgacgag ccattcgtct
     1561 tcagcgcggc tcgctgtctc atcgaacaca agcggttcgt gcatcagaag tagccctccc
     1621 gctttttctg ttccatcgaa gccgacgcat cgtggtcgat caggcgtccg tcgcgttccg
     1681 aacgccgcag ccctgcggtt tcggcgacga tctgcgcgac cgaggcggcg ttgctttcga
     1741 tagcgccggt cagcgggtag cagcccaggg tgcggaagcg caccttgcgc gtctccacgg
     1801 tctcgcccgg ctgcagctcg aggcgatcgt catcccgcat cagcagagtg ccgtcgcggc
     1861 gcacgaccgg ccggtcggcg gcaaaataaa gcggcacgat cgggatttcc tcgcgctcga
     1921 tatacatcca gacgtcgagc tcggtccagt tggagagcgg aaacacgcgc acgctctcgc
     1981 cgggcgcgag ccgcgtattg tagagccgcc agggctcggg ccgctgccgc cgcggatccc
     2041 accggtgctg cggcgcgcgc agtgaaaata tgcgctcctt ggcgcgcgac ttctcttcgt
     2101 cgcgccgcgc gccgccgatc gccgcgtcga aaccgtacag gtcgagcgcc tgcctgagcg
     2161 cctgcgtctt catcacgtcg gtatagagcc gcgagccgct gcggaaggga tcgatgccct
     2221 gtaccaggcc gtcacgattg gtatgaacga tcagccggag gccgagctcg gcggcgcgcc
     2281 gatcgcggaa cgcgatcatg tcgcgaaact tccaggtggt gtcgatgtgc agcaccggga
     2341 agggaatgcg gcccggataa aacgccttcg ccgccagatg cagcaggacc gaggaatcct
     2401 tgccgatcga atagagcaga accgggttgc ggcactcggc ggcgacctcg cgcaggatgt
     2461 agacgctctc ggcttcgagc cagtcaaggt gagaaagcgg cttcatgatg ttgcttgcgc
     2521 gatgtccagc gtggcgcggg cgcgatggcg ctcgtgcagt ccacactcct tcttgccgtc
     2581 ctcttcccac caccagcggc cggcacgctc gctctcgccg ggcgcgatgg cgcgcgtgca
     2641 cggggcgcag ccgatggagg tgaagccctt ggcatgcagg gcgttgaccg gaacgtcgcg
     2701 ctcgcgggtg aagctcagca ccgcctcgcg cgtccagtcg aagagcggat tgaatttgag
     2761 aatgccgcgg tcccagtcga cattgaccaa cccgacgtcg cggcgcgcgt ccgactgtcc
     2821 cgacctcagg ccggtgatcc aggccgtggc gccggcgagc gcgcgattga gcggctcgac
     2881 cttgcgaacg tggcagcacg ccacgcgcgc gtcccgcgaa tgaaagaagc cgttgatccc
     2941 ttgcgcggcg accaacgctt cgaccgcggc gtgctccgga tagatcgagc ggatgcgaat
     3001 gccgtagcgt tgctcgctct ccatccagac gtcatgtgtc tccggaaaca gccggccggt
     3061 gtcgagggtg acgatctcca cgtcgatctg atgctgccgc agcgcgtgga ggatcacctg
     3121 gtcctcgagg ccgaagctcg tggtaaagac gatcggtccg cggacctcac ggcgcatgag
     3181 gtgcaatcgt tgatcgagcg gcaacggcgc gagcgcggcc gcgagcgccg tcgaccgcgt
     3241 ccgcaattca tccgatggaa gcggctcgcg agcggagggc agcggcgtat cgagcgcagc
     3301 aattggtttt gaacacaccc tctccatgac cgcgaggtgc gggcaaaagt cgttatctgt
     3361 caagcactaa gacgaagttt gacgccggcg cgcgggcgac gttgcgcaat tcctacctgc
     3421 agtggaaatg ttagaagaat cttcttgtcg gtcgcgcgcg gaccgccctc acgaccggtg
     3481 atagtcgtcc tcgaggcgca cgatgtcgtc ctcgccgaga tagctgccgg tctgtacctc
     3541 gatcagttca aggtcgatct tgccgggatt ctcgagccga tgccgggccc cgtttggcac
     3601 gtagagcgac tcgttctcgt gcaggaaggt gacgttgtcc ccgatcgtca cccgcgcggt
     3661 gccgcgcacg accacccagt gctcggcgcg gtgatgatgc atctgcagcg acagccgccc
     3721 gccctgcttc accacgatgc gcttgacctg ataacgctcg ccctggtcca gcgactgata
     3781 ggagccccac ggccgatgcg ccttcagatg gtcttcggtc agcgccgggg cgacctcctt
     3841 gagcttgccg acgacgcccc gcaatccgtc gctcgcctcg cgccgcgcta ccagcaccgc
     3901 gtccgcggtg gtgacgacga ccacgttgtc gaggccgagc accgccacga actgcctgtc
     3961 ggtggccaca taggagccgc gcgtgtcgac gaagagcgcc ggaccatgtg cggcattgtc
     4021 ggctgcttcg tgcgccgaca gttcccacac cgcctgccat gagccgacat ccgaccagcc
     4081 gtacgacacc ggcatcacgc tcgcgcgcgt cgtgcgttcc atcaccgcat agtcgatcga
     4141 tttcgccgct gcccgcgtga acgcgtcgac gccgagcgtg acaaagccga gatcggtgcc
     4201 ggcggccgcc agcgcggccg cgaccgccgc ggcgctgtcg ggctcgaagc ggtggtattc
     4261 gtcgagcagg aagcgcgcgc ggaacatgaa attgcccgag ttccacagat agccctcggc
     4321 gagatagcgt gccgcggtct cggcgtcggg cttttcgaca aacctttcga tcgcgaagag
     4381 gcctggagcg agcgaagggc cggtccggat gtagccgtac tcggtcgccg gtcgcgtcgg
     4441 ctcgacgccg aacatgacga tccgatcctc ctcggcggcg gcgcggccga gggcgcagac
     4501 cttggcgaac gccgccggat cggtgacgac gtggtcggcg gcaagcgcga cgacgacggc
     4561 gccatcatcg cgcgtcagcg cgtagccggc gccggcggcg atcgctggac cggaatcgcg
     4621 ccgcgccggc tcgagcagga cgtcggcctc ggcgccgatg gcggcaagct gctcggcgac
     4681 gaggaagcgg tactgaccgt tggtcaccac gatcggccga gcaaacaaag ccggatcggc
     4741 aaccctgcgc acggtctcct ggaacgtcga cagcgtgccg aacagcggca ggaactgctt
     4801 cggccggttc tcgcgcgacg ccggccacag ccgcgtgccg gcgccgccgc acatgatcag
     4861 ggggatgatc ggttgagcca atttatgccc gtcgtccgtg tccgccgatg ccgagcccgc
     4921 gccgcggcaa gagcacaccg caaccaagca tcaggtcgca gttgctgcct tccataagcg
     4981 gccagcactg tcaaatgacg tgccgttccg ccacgcgcgc cgagcgacat cgcattgaaa
     5041 atcacatcac gcgcgggcac gccctctccc ctggcgttct cggaatgatg tttccccgag
     5101 atggatgtcg attgccagtc attcataagc ttctgatttt gcttgcgtcg actcggattg
     5161 cgtatcacgt tcgctcccga cgtttccttt ctgctgctac ctatgtgaaa gaaaggtagc
     5221 acggcgtcag gagctttcaa tccatgccgc gcaccaaatt gacgaagagt gccatcgacg
     5281 cactgccaac ccttccctct gatacggtgt attgggatgc agcgctcccc ggcttcggaa
     5341 tcaaggtcac gccgaagggc cgcaaggtgt tcatcgtctt gtaccgcacc ggcggtgccg
     5401 gctctaagct gcgcaagtat accatcgggc caactgggcg cgtcaccttg catcaggccc
     5461 gcatagcggc gcagaaggta ttcgcggcca ggctggacgg acgcgatcca gcggctgaga
     5521 agcgagagag aaaacgccgg gcggtggcgg atcgcgtgga ggacctgctg gaggccttca
     5581 tcgaccaacg gctgtcccag aaccgttctg ggggtgagat tgccaggctg cttcgccggg
     5641 agatggggag ggcttgggcc ggcagaagca tccacgagat cggcaagcga gatgtggtgg
     5701 aggtcatctc cgccattgaa caacgcgggg ctccggtcgc cgccaacaag accttgaaat
     5761 caatcaagac gttcctgcgc tggtgtgtgg ggcgagccat cctcgatcag tcaccagccg
     5821 agggcgtgcc ggcccctgca aaagaaatat ctcgtgaccg ggtgttgagt gacgatgaac
     5881 ttgccaaagt catttttgcg gccagagagg tcgacgaccc ttattgtggc atcgtggagc
     5941 tgttggtgct gaccggacag cgccgcgagg aggtggcaag gctggcttgg gacgaactag
     6001 acctcacgca gcgcatttgg acgattccca aatcgcggac aaagaatgcc aagccccatg
     6061 ttgtccagct ttcggatcaa tcaatcgctg tgttgcgccg g
//
LOCUS       DATMQB010000090         5740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_646248, whole genome shotgun sequence.
ACCESSION   DATMQB010000090 DATMQB010000000
VERSION     DATMQB010000090.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5740
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_646248"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1512)
                     /locus_tag="VNY79_02885"
     CDS             complement(<1..1512)
                     /locus_tag="VNY79_02885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HWX71426.1"
                     /translation="MTDREKPPLAANFAPATREDWRKLVDAVLKGAPFERLRSTTYDG
                     LAIEPLAARRAGAQPRSGRRGAAPWQALARIDHPDPAEANATALHELENGASGLALVF
                     AGAVGDHGFGLPANERTLGRVLEGVDLGAGIAVELDLTPPAEAVIDAALASGLVLSPP
                     ASNLRVGRDPLGAMAIAGGGARRWSEDAPHFARRLAALAREGVAGPQAAADGRVIHNA
                     GGSEAQELAFVLAVATAYLRALEAEGVALDAARRILFFRLCADADQFLTMAKFRALRK
                     LWARVEVSCALAPAPALVSAETAWRMLAARDPHVNILRATIAVVAAALGGADAITVLP
                     FTAARGLPDAFARRIACNTQLILLEESHLAKVADPAAGSGTVEDLTDELCGAAWKLFQ
                     AIEAAGGAVAALENGLIQRNVAAIRAERAAAVARREEALTGVSIFPDLDEPVVPVLAP
                     IPPPPRRAGPEQMFEPLPAIRLAEPFEALRDASDRFLARTGARPKIFLASLGTP"
     gene            complement(1593..2081)
                     /gene="folK"
                     /locus_tag="VNY79_02890"
     CDS             complement(1593..2081)
                     /gene="folK"
                     /locus_tag="VNY79_02890"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003848 -
                     2-amino-4-hydroxy-6-hydroxymethyldihydropteridine
                     diphosphokinase activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HWX71427.1"
                     /translation="MAEAFIALGGNVGDVRSTFERAIVFLCDGADVRLTARSSDYNTP
                     PWGFIQQPPFVNAVIAVATMLPPHVLLARAQQCERTLGRDRGAEPRWGPRTIDLDLLA
                     YDDLVLAGPELTLPHPLLFKRAFVLVPLAEIAPNRVIGGLRVRGALDRIDTSGIEKLA
                     PR"
     gene            complement(2084..2467)
                     /gene="folB"
                     /locus_tag="VNY79_02895"
     CDS             complement(2084..2467)
                     /gene="folB"
                     /locus_tag="VNY79_02895"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004150 - dihydroneopterin aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006760 - folic acid-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HWX71428.1"
                     /translation="MSDAIFVNGLVLHAYHGVMPHEAKVGQPFKLDLMLDVDLGAASR
                     SDMLKDTISYETLVKIASEAFCVRRYRLVEAAAGAVADTVLDRYPQIRCARVTVRKPH
                     APIAATFDDVGVIVVRARDRARGKS"
     gene            complement(2464..3231)
                     /gene="folP"
                     /locus_tag="VNY79_02900"
     CDS             complement(2464..3231)
                     /gene="folP"
                     /locus_tag="VNY79_02900"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004156 - dihydropteroate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009396 - folic acid-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HWX71429.1"
                     /translation="MGVLNVTPDSFSDGGRFLDPQVAIVHARQLAAEGADIIDVGAES
                     TRPYGGAVSVPLDEERARLAPIWPDVVALGVPVSIDTLKAAVAAWALDQGAAIVNDVW
                     GLQRDADMARVVAAGGAAVIIMHNRDRADPAIDIVADVTAFFERSLVIAARAGIARER
                     IALDPGIGFGKTAEQSLTCIARLDQWRGFGVPLIVGASRKRFIHSVAPSEPVERLGGS
                     IAAHLLAVENGASVVRVHDVAPTVQALAVAAAIRRAR"
     gene            complement(3415..3822)
                     /locus_tag="VNY79_02905"
     CDS             complement(3415..3822)
                     /locus_tag="VNY79_02905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4332 domain-containing protein"
                     /protein_id="HWX71430.1"
                     /translation="MGYPITDIQGIGPDTAAILKSEGIRTTLGLLRMAKTPKQRLRIA
                     AKIGTDDKSVLDWVTAADRMRVKGVGCEYSQLLRAAGVRTVAELRFRNPQRLVEKMQE
                     ANTKRKLVRLLPSVNTVARWIEIAKKLPPIVRY"
     gene            complement(3869..4222)
                     /locus_tag="VNY79_02910"
     CDS             complement(3869..4222)
                     /locus_tag="VNY79_02910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006165185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2267 domain-containing protein"
                     /protein_id="HWX71431.1"
                     /translation="MDEVIGRLVANVGIDRAAAENAVGIILDLLAKEGPPDKVQSYLA
                     KLLGADAPRQKAASEVAGGVGGVTGAVMRLMGASPSMGKVQSVSQQFNAYARERIGED
                     EVGGFVAIAGLAQFV"
     gene            4505..>5740
                     /locus_tag="VNY79_02915"
     CDS             4505..>5740
                     /locus_tag="VNY79_02915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase HerA-like domain-containing protein"
                     /protein_id="HWX71432.1"
                     /translation="MTSPDQDGKIFVGKGADDAYLLFALANRHGLATGATGTGKTVTL
                     QVLAEGFSRAGVPVFAADVKGDLSGIAARGEAKPDFVQRAKNMRFDYQPDEFPVIFWD
                     VFGEQGHPIRTTVLEMGPLLVSRMLSLNDVQEGIINIAFRFADDDPELKAAEGRGLVD
                     LKDLRELLAYLAKNAKEVSTRYGNVATAAVAAVQRQLLVLENQGGTKFFGEPALAIED
                     LMKTEPKSGRGYINVLAADKLMTSPQLYATFLLWLLSELFEKLPEVGDPQKPKLVFFF
                     DEAHLLFTDAPKELLDKIEQVVRLIRSKGVGVYFVTQNPLDVPDKVLGQLGNRVQHAL
                     RAFTPRDQKAVKAAADTFRPNPKLDTARVITQLGKGEALVSFLEAAGTPAMVDRAMIR
                     PPSARIGPVTPEERRAAMAK"
BASE COUNT          974 a         1886 c         1983 g          897 t
ORIGIN      
        1 gggggtgccg agactggcga ggaagatctt cggccgcgcc ccagtccgag caagaaacct
       61 gtcggatgca tcgcgcagcg cttcgaacgg ctcggcgagg cggatcgccg gcagcggctc
      121 gaacatttgc tccggcccgg cgcggcgggg cggcggcgga attggcgcga gcaccgggac
      181 gaccggttcg tcgaggtcgg ggaagatgct gacgccggtg agggcctcct cgcgccgcgc
      241 gacggcggca gcgcgttcgg cgcggatggc ggcgacgttg cgctgaatga gaccgttctc
      301 gagcgctgcg acggcgccgc ccgccgcttc aatcgcctga aagagcttcc aggccgcgcc
      361 gcaaagctca tcagtcaaat cttcaacagt gcccgaaccg gcggccggat cggccacttt
      421 ggccagatgc gattcctcaa ggaggatgag ctgggtgttg cacgcgatgc ggcgcgcaaa
      481 cgcgtcgggc aaaccgcgcg cggcggtgaa cggcaggacg gtgatcgcat cggcgccgcc
      541 gagggcggcc gcgaccacgg cgatggtggc gcgcaggatg ttcacgtgcg ggtcgcgcgc
      601 ggcgagcatg cgccacgccg tttccgccga gaccaacgcc ggcgcgggcg cgagcgcgca
      661 cgaaacctcg acgcgcgccc acaatttccg cagcgcgcgg aatttcgcca tggtgaggaa
      721 ctgatccgca tcggcgcaga gtcggaagaa gaggatgcgc cgtgccgcat cgagcgcaac
      781 gccttccgcc tcgagcgcgc gcagataggc ggtcgcgacc gcgagcacga aggccagttc
      841 ctgcgcctcg gagccgccgg cattgtggat cacgcggccg tcggccgcgg cctgcgggcc
      901 cgcaacacct tcgcgggcca gcgcggcaag tcgtcgggca aaatgcggcg cgtcttcgct
      961 ccagcgccgc gccccgcctc ccgcgatcgc catggcgccg agcggatcgc gtccgacgcg
     1021 aagattgctc gccggcggcg acaggaccag tccgctggcg agcgccgcgt cgatgacggc
     1081 ttcggcgggc ggcgtcagat caagctcgac ggcaatgccg gcgccgagat cgacaccctc
     1141 gaggacgcgt ccgagcgtgc gctcattcgc cggcagcccg aagccgtggt cgccgaccgc
     1201 gccggcgaac acgagcgcga ggccgctggc gccgttctca agctcgtgca gcgccgtggc
     1261 gttcgcttcg gccggatcgg ggtggtcgat gcgcgcgagc gcctgccagg gcgcggcccc
     1321 ccgccgcccg gagcgcggct gcgcgccggc gcggcgcgcg gcaagcggct cgatggcgag
     1381 gccgtcatag gtcgtgctgc gcaaccgctc gaacggcgcg cccttgagca cggcgtcgac
     1441 gagcttgcgc cagtcctccc gcgtcgccgg agcaaaattc gcggcaagcg gcggcttttc
     1501 gcgatcagtc atcggttcag aattccacgc cgatcggaat aggccaacag gccggctcca
     1561 gcaatccgcc tctccggccg gcgcgccaga gtttaccgcg gcgccagctt ctcaatcccg
     1621 ctcgtgtcga tgcgatcgag cgcgccgcgg acccgcaacc cgccgatcac gcggttcggc
     1681 gcgatctcgg cgagcgggac gaggacgaaa gcgcgcttga acagaagcgg gtgcggcagg
     1741 gtgagctcgg gaccggcaag gacgagatcg tcataggcaa ggaggtcgag atcgatggtg
     1801 cgcgggcccc agcgcggctc ggcgccgcga tcgcgcccga gcgtgcgctc gcattgctgg
     1861 gcgcgcgcga gcaacacgtg cggcgggagc atcgtcgcga cggcaatgac ggcattgacg
     1921 aacggcggct gttggatgaa gccccagggc ggcgtgttgt agtcggaaga gcgcgcagtc
     1981 aggcgtacgt cggcgccgtc gcacagaaaa acgatggccc gctcgaaggt tgagcgcacg
     2041 tcgccgacat tgccgccgag cgcgatgaac gcttccgcca tggtcagctc ttgccgcggg
     2101 cgcgatctcg cgcgcgcacg acgatcaccc cgacatcgtc gaaggtcgcc gcgatcggcg
     2161 cgtgcggctt gcgcacggtg acgcgcgcgc agcgaatctg cggatagcga tcgagcacgg
     2221 tgtccgcgac cgcgccggcg gcggcctcga ccagccgata gcggcggacg cagaacgcct
     2281 cgctcgcgat tttaaccagc gtctcatagg agatcgtatc cttgagcatg tcgctgcgcg
     2341 aggcggcgcc gagatcgacg tcgagcatga gatcgagctt gaacggctgc ccgaccttgg
     2401 cctcgtgcgg catcacgccg tgataggcat ggagaaccag cccgttgacg aagatggcgt
     2461 cgctcatcgt gcgcgcctga tcgccgccgc gaccgccagt gcctgcacgg tcggcgccac
     2521 gtcgtgcacg cggaccacgc tcgcgccgtt ctcgacggcc agaagatgcg ccgcgatcga
     2581 gccgccgagc cgttccacgg gctcggaagg cgcgaccgaa tggatgaaac gcttacgcga
     2641 agcgccgacg atgagcggga cgccgaagcc gcgccattgg tcgagccggg cgatgcaggt
     2701 caggctctgc tctgccgtct tgccgaagcc gatgccggga tcgagcgcga tgcgctcgcg
     2761 cgcgatgccg gcacgcgcgg caatgacgag cgagcgctcg aagaacgccg tcacgtcggc
     2821 aacaatgtcg attgcgggat cggcgcggtc gcgattgtgc atgatgatga ccgccgcgcc
     2881 gcccgcggcg acgacgcgcg ccatgtcggc gtcgcgctgc aggccccaga cgtcgttgac
     2941 gatcgccgcg ccctgatcga gcgcccaggc ggcgaccgcc gccttgagcg tatcgatcga
     3001 aaccgggacg ccgagcgcga cgacatcagg ccatatcggc gcaagccgcg cccgttcctc
     3061 atcgagcggc acgctgaccg caccgccata ggggcgcgtc gattcggcac cgacatcgat
     3121 aatatcggcg ccttcggcgg caagctgccg cgcatgcacg atggccacct gcggatcgag
     3181 aaagcgtcca ccgtcggaaa aggaatccgg cgtgacgttg agcacgccca tgaccagcgg
     3241 ccgcgctttg gcgaggagtg cggcaaacac gttgccgccg ggcgccaggc ttggcgccgg
     3301 agtggttcgc gtgtcgagac gcgtggccat tctttggcct tgcgcggtca ccggcgagga
     3361 gtcaagccgc cgccgggcag tgcccgcggc gcgcgttcgt tccggctcgc gcgttcaata
     3421 gcgcacgatc ggcggcagct tcttggcgat ctcgatccag cgcgccacgg tattcaccga
     3481 gggcagcagc cgcaccagtt tgcgcttggt gtttgcttcc tgcatctttt cgacgaggcg
     3541 ttgcggattg cgaaatctga gctcggccac ggtccgcacg ccggccgcgc gcagaagctg
     3601 cgaatattcg cagccgacgc ctttgacgcg catgcgatcg gccgcagtca cccaatcaag
     3661 cacgctcttg tcgtcggtgc cgatcttcgc ggcgatccgc agcctttgct tgggggtttt
     3721 ggccatgcgc aacaggccga gtgtggtgcg gatcccttcc gatttcagga tcgctgccgt
     3781 gtccggcccg attccttgaa tatcggtaat gggataaccc atagacgtgc ccctcgaccg
     3841 tgcaacagcc gtgtgtcaat gaccgcactc aaacaaactg cgcgaggccg gcgatggcga
     3901 cgaacccgcc gacctcgtcc tcgccaatcc tttcacgtgc ataggcgttg aattgctggc
     3961 tgacgctctg cactttcccc atgctcgggc tggcgcccat caagcgcatt actgcgcccg
     4021 tcacgccgcc cacgccgccg gccacctcgc tggcggcttt ctgccgcggc gcgtcggctc
     4081 ccaggagctt ggcgaggtac gattgcacct tgtcgggcgg gccttccttg gccagcaagt
     4141 cgaggataat gccgacagca ttctcagcag cggctcggtc gatcccgaca ttggcgacga
     4201 gacgcccgat cacctcgtcc attgtcccct cgacgacccc gcattcccgg caggatttcg
     4261 ccatattgta cgttcgccca acgcatgaca aggcggtggg cgtccattcg tgcgattggg
     4321 cgcgcgcaac tgcgatgaag agcgacgagc gttgcaaaca tgcaacgctt cggcgcgcag
     4381 ccatggtgga aatggcgccg accgccctta tacagacaga gtcagaggct cgagatagtg
     4441 tgcgaagcgc gaggtgctcg cccgccgtcg ttgtgagcgc gggttgcggg cgaggagaag
     4501 atcgatgacg agtccggacc aggacggaaa gatttttgtc ggcaagggcg ctgatgacgc
     4561 ctatttgttg ttcgcgctcg ccaaccggca tggtttggca accggcgcga cgggtaccgg
     4621 caagacggtg acgttgcagg tgctggcgga gggattttca cgcgccggcg tcccggtatt
     4681 cgcggccgac gtgaagggcg acctttccgg catcgccgct cgcggcgagg ccaagcccga
     4741 tttcgtgcaa cgcgccaaga atatgaggtt cgattaccag cccgatgaat tcccggtcat
     4801 cttctgggac gttttcgggg agcagggcca tccgatccgc acgacggttt tggagatggg
     4861 gccgcttctg gtctcgcgca tgctcagtct caacgatgtg caggaaggca tcatcaacat
     4921 cgccttccgt tttgccgatg acgatcccga attgaaggcg gcggagggcc ggggtctcgt
     4981 cgatctcaag gatttgcgcg agctgctggc gtatttggcc aagaacgcca aggaggtgag
     5041 tacgcgctac ggcaacgtgg ccaccgccgc ggtcgctgca gtgcagcgtc agctcttggt
     5101 gctggagaac cagggcggga caaaattctt cggcgagcca gcactggcga tcgaggatct
     5161 gatgaagacc gaaccgaaga gcgggcgtgg ctacatcaat gtgctggccg ccgacaaact
     5221 gatgacgagc ccgcagctct acgccacgtt cctgctctgg ctcctttcgg agcttttcga
     5281 gaagctgccc gaggtcggcg acccgcagaa gccgaagctc gtgttcttct tcgatgaggc
     5341 gcacctgctc ttcaccgatg cgccgaagga actgctcgac aagatcgagc aggtggtgcg
     5401 gctgatccgc tccaagggcg tcggtgtcta tttcgtcacc cagaacccgc tcgacgtgcc
     5461 ggacaaggtg ctcggacagc tcggcaaccg ggtgcagcac gcgttgcggg cgttcacgcc
     5521 ccgcgaccag aaggcggtga aggcggcggc ggatacgttc cggccgaacc cgaaactgga
     5581 cacggcgcgg gtcatcaccc agctcggcaa aggcgaggcc ttggtctcgt tcctcgaagc
     5641 ggcggggacc ccggcgatgg tcgatcgcgc catgatccgt ccaccttcgg cgcgcatcgg
     5701 gccggtcacg ccggaggagc gcagggccgc gatggcgaag
//
LOCUS       DATMQB010000091         2279 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4366000, whole genome shotgun sequence.
ACCESSION   DATMQB010000091 DATMQB010000000
VERSION     DATMQB010000091.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2279)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2279)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2279
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4366000"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            22..588
                     /locus_tag="VNY79_02920"
     CDS             22..588
                     /locus_tag="VNY79_02920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1134 domain-containing protein"
                     /protein_id="HWX71433.1"
                     /translation="MAGLVVGLGAAPGLAQTDSPPPQGPPPANQYSSNEVIDAGHHFF
                     GGISRGLASVVEKAVSQWGLPNGYILGEEASGAFIGGLRYGDGTLYTKNAGDVRVFWQ
                     GPSLGFDAGADGARTMMLIYNLPRTAAIFDRFGGVAGSAYFVGGFGMTALAANNIVVV
                     PIRSGLGLRLGANVGYLKFTTEPTWNPF"
     gene            793..2088
                     /locus_tag="VNY79_02925"
     CDS             793..2088
                     /locus_tag="VNY79_02925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007600524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71434.1"
                     /translation="MIEPIMYFGIGFLVSALLGLLFVPLVHNRAVRLTMRRLEAATPL
                     SIAEIRADKDQLRAEFAMSTRRLEMSVDQMKAKTTTQLAELAKKSDAINQLKKELGEK
                     TAAIFALESRDKALRDQLRDSEQEFELKTSSLYEAERTLADKETGLEKVIAELGERSL
                     AADNQRVELAAARMQIEAMRLSVGEAERAVKAAEERLASERREAEIVTKELNGARGKL
                     DNLAARTDELERQLVMQTTEAEVLSRRVHELEARLNEQGRLLAEREFEIDRLHGELEG
                     ARTLEGDLRGELAHAGNRSDSAANQFRSDIGQLDAQLAAALEERSKLQREIATMKREA
                     ETAWAAERVENALLRERINDVAAEVARLTAVLEGPGSPIETMLAVEGTAVGQGMANGA
                     AGSNGEGAAAAIDSPRQGKGTLADRIRALQSSASRVASN"
     gene            2205..2279
                     /locus_tag="VNY79_02930"
     tRNA            2205..2279
                     /locus_tag="VNY79_02930"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2237..2239,aa:Val,seq:cac)
BASE COUNT          395 a          762 c          770 g          352 t
ORIGIN      
        1 ttcgccgcgc gctttgccgc cattgccggg ctcgttgtcg gcctcggcgc cgctcccggg
       61 ctggcgcaga ccgattcgcc gccgccgcag gggccaccac ccgccaacca atactcgtcg
      121 aacgaggtca tcgatgccgg ccaccatttc ttcggcggca tctcgcgcgg gctcgcttcc
      181 gtcgtcgaga aggcggtaag ccaatggggc ctgccgaacg gctatattct gggtgaagag
      241 gcgagcggcg cgttcatcgg cggcctgcgc tacggcgacg gcacgctcta taccaagaat
      301 gccggcgacg tccgcgtgtt ctggcaggga ccgtcgctcg gcttcgacgc cggcgccgac
      361 ggcgcccgca ccatgatgct gatctataac ctgccgcgga cggcagcgat cttcgatcgg
      421 ttcggcggcg tggccggctc ggcctatttc gttggcgggt tcggcatgac ggcgctggcc
      481 gccaacaaca tcgtcgtcgt gccgatccgc tccggccttg gactgcggct tggggcaaac
      541 gtcggctatc tcaagttcac caccgaaccg acctggaacc cgttctgact gtccaccgcg
      601 gcggcgacgc gccgcgcaca ggcagacgta acaaacctct gtctttttct agcgcagcgc
      661 ccattctcgg tttaggttac ctcgttgtgg gcgtcgtgca tgcggcgccc acgtggcaaa
      721 gtggtgccgc tcccctcccc tccctccccc gcttgcgggg gagcgaaggg aggggcttgg
      781 aggcgtggtg tcatgatcga accgatcatg tatttcggga tcggcttcct cgtttcggca
      841 ttgcttggac tgctcttcgt tccactcgta cataaccgcg ccgtgcgcct gacgatgcgg
      901 cgcctggagg cggcgacgcc gctgtcgatc gccgaaatcc gcgccgacaa ggatcagttg
      961 cgcgccgaat tcgccatgtc gacccggcgg ctcgaaatga gcgtcgacca gatgaaggcc
     1021 aagacgacga cgcagctcgc cgagcttgcc aagaagagcg acgccatcaa tcagctcaag
     1081 aaggagcttg gcgagaagac cgcggcgatc tttgcgctgg aatcgcgcga caaggcgctg
     1141 cgcgatcagc tgcgtgacag cgagcaggag ttcgagctga agacgagctc gctgtacgag
     1201 gcggagcgca cactggccga caaggagacg gggctcgaga aagtgatcgc cgagctcggc
     1261 gagcggtcgc tcgccgccga caaccagcgc gtcgagctgg cggcggcgcg gatgcagatt
     1321 gaggccatga ggctgagtgt cggcgaggcc gaacgcgcgg tgaaggcagc cgaggaacgc
     1381 ctggcgagcg agcgccgcga ggcagagatc gtcaccaagg agttgaacgg ggcgcgcggc
     1441 aagctcgaca atctcgccgc ccggaccgac gagctggagc gccagctggt gatgcagacg
     1501 acggaggccg aggttctaag ccgccgcgtg cacgagctgg aagcgcggct caacgaacag
     1561 ggccgcctgc tcgccgagcg cgaattcgag atcgaccggc tgcacggcga gctcgaaggc
     1621 gcgcgcacgc tcgaaggcga tctgcgcggc gagcttgccc acgccggcaa ccgcagcgat
     1681 tccgcggcca accagttccg ctccgacatc ggccagctcg acgcgcagct cgccgccgcc
     1741 ctcgaggagc ggtcgaagtt gcagcgcgag attgcgacga tgaagcgcga agcggaaacc
     1801 gcctgggcgg ccgagcgcgt cgagaatgcg ctcctgcgcg agcgcatcaa cgacgtcgcc
     1861 gccgaggtgg cgcgcctcac cgccgtgctc gaaggccccg ggtcgccgat cgaaaccatg
     1921 ctcgccgtcg agggaacggc ggtcggccag ggaatggcca acggagccgc aggcagcaat
     1981 ggcgagggcg ccgccgccgc gatcgattcg ccgaggcagg gcaagggcac gctggcggac
     2041 cgcatccgcg cgctgcagtc gagcgcctcg cgcgtcgcat cgaactagcg ttcgtcttta
     2101 ccgctctttc tctgcgcgta ccggcggccg cacctcccaa gtgatttgcc ggcgtcgctt
     2161 gacacccctc gaacccgttc cttaaatcac agccccgatc ggccgggcgc ttagctcagc
     2221 gggagagcgt tcccttcaca cgggagaggt cgtaggttca atccctacag cgcccacca
//
LOCUS       DATMQB010000092         4856 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3126584, whole genome shotgun sequence.
ACCESSION   DATMQB010000092 DATMQB010000000
VERSION     DATMQB010000092.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4856)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4856)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4856
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3126584"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..837)
                     /locus_tag="VNY79_02935"
     CDS             complement(34..837)
                     /locus_tag="VNY79_02935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009030982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX71435.1"
                     /translation="MSEDFLKNPLSLFDVSGKTAIVTGASGAFGALAAKVLAGAGANV
                     VIAAANAAELKKVAESCKKLGGKVEALAKRPSSEANCEAIVKAAVERFGRLDILVVAS
                     GINKVGKIVDQAAADFLEVIDANVTQSWLMARAAGRQMIKQSGGGKVILMSSARGLLG
                     HPAGYSAYCASKSAVDGITKALGCEWGETGITVNALGPTVFRSPLTQWVFEDNERATA
                     VRKGFLMRVPKGRLGEPSDLAGPLLFLASKASDFYTGHILYADGGYTAG"
     gene            complement(940..1281)
                     /locus_tag="VNY79_02940"
     CDS             complement(940..1281)
                     /locus_tag="VNY79_02940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009030983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HWX71436.1"
                     /translation="MQVKRFSEAKTYDAPNHRGCAPLRLFGAEAGGTRNLVVGISHFL
                     PGGGAGPDASPPEKVYFVLAGELTVIAGGKETVLKENDSCFIGPNENREIVNRGNEIC
                     SILVAIASAPK"
     gene            complement(1281..2123)
                     /locus_tag="VNY79_02945"
     CDS             complement(1281..2123)
                     /locus_tag="VNY79_02945"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009030984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HWX71437.1"
                     /translation="MAKKIRGVSFEENENNAMGLSFYNLSHRFGYQSPNWPYFEDVKI
                     ERIHYMAKSGVLSQRITTSMHNTTHIDAPAHVVQGTPFIDEVPLPHFFGSGIVVALPK
                     KKWESITYDDLEKVAGKVVRPRDVVIVNTGWHKKYEDSEDYFCYAPGFVPSAGEWFVE
                     KQVKVVGHDTQANDHPLATAIGPQRNGPLHPHLAAEYKQWSGGRDWKNDFPDWEPVHR
                     ILFKNGILGIENVGGDIDKVTGRRCTFAFFPWNWERGDGCIIRLVAIVDPKGSYRIEK
                     GEKL"
     gene            complement(2241..2996)
                     /locus_tag="VNY79_02950"
     CDS             complement(2241..2996)
                     /locus_tag="VNY79_02950"
                     /inference="COORDINATES: protein motif:HMM:NF013757.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator"
                     /protein_id="HWX71438.1"
                     /translation="MNDKTQVQVIARAAAILHALEDEADGLSLGQIAQRVNLARSTVQ
                     RIVAALAAEKFLIAASPNGRVRLGPTILRLAASARTDFVAIARPFLVQLSNELKETVD
                     LAVVKKDHLVFIDQVIGSHRLRAVSAVGETFPLHCTANGKAYLAGLETDAIARLIGAS
                     YEQRTPRTLTRLEDLLKDLKSVRKTGVAFDREEHTQGICAAGVATRDPLGNVIAISVP
                     VPAQRFYQHQRNIAAQLRATKEALERRLLAAAA"
     gene            3154..4113
                     /locus_tag="VNY79_02955"
     CDS             3154..4113
                     /locus_tag="VNY79_02955"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HWX71439.1"
                     /translation="MISKIALEEHFLCPGFEDYWRATTGSIDPAVASSLFARLTDFGE
                     TRLEAMDRAGIARAVLSIAGPGVQSERDVAVASRRAHEANDFLAREVEKRPDRYSGFA
                     HLAMQDPQAAADELERCLRELKFCGATVNGHTNGQYLDHRALHPFWERAEALQATIYI
                     HPADPITPSPALDGHDGLRRATWEWGFETGSHALRLVFGGVFDRFPRARIALGHLGET
                     LPYLLWRFDSRAKLYRVALEKRPSDYIRQNIVVTTSGMCSPEPLNCALAALGTDHVMF
                     AADYPFESAQEAGQFLDEVPLAHGVREDVAFRNAVSRLGLPTP"
     gene            complement(4280..>4856)
                     /locus_tag="VNY79_02960"
     CDS             complement(4280..>4856)
                     /locus_tag="VNY79_02960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX71440.1"
                     /translation="NFLNQYQQAGGNAHLIGGSIMVDQTVLSSKGKAKDALIGTPAAS
                     GLADADPSPKWQAFVKAYQQMPKEGYFKNPFGSPSLLAISYYNSADAVFKALDEVKGE
                     LSDGNKKFRAALQSMVLDAPNGMIKLDENRQAIGTSFVTEVVKDDKGELVSKLVKTVP
                     NVQQRLGFSKAVYDKFIPPGRDNPPCEKNYN"
BASE COUNT          790 a         1590 c         1558 g          918 t
ORIGIN      
        1 cgatgcgtgc attcgttgga tccttggcca tgctcagcct gccgtgtagc cgccgtcggc
       61 gtagaggata tggccggtgt agaaatcgga cgccttcgaa gcgaggaaca gcagcggacc
      121 ggcgaggtcc gacggctcgc ctaggcgccc cttggggacg cgcatcagaa atcccttgcg
      181 cactgcggtc gcgcgttcgt tgtcctcgaa cacccactga gtcagcggcg aacgaaacac
      241 cgttgggccg agcgcattga cggtgatgcc ggtctctccc cactcgcagc cgagcgcctt
      301 ggtgatgccg tcgaccgccg atttcgacgc gcaataggcg gagtagccgg cgggatggcc
      361 gagaaggccg cgggccgacg acatcaggat gaccttgccg ccgccgctct gcttgatcat
      421 ctgccggccc gccgcgcgcg ccatcagcca ggactgcgtg acgttggcgt cgatgacttc
      481 aagaaaatcc gctgccgcct gatcgacgat cttgccaacc ttgttgatgc ccgaggcgac
      541 gacgaggatg tcgaggcggc cgaagcgctc caccgccgct ttcacgatcg cctcgcagtt
      601 cgcttccgag cttgggcgtt tcgccaaggc ttcgaccttg ccgccaagct tcttgcagct
      661 ctccgcgacc ttcttcagtt cggcggcatt ggcggcagcg atcacgacat tggcgccggc
      721 gcccgcaagc actttcgcgg cgagcgcgcc gaacgccccg gacgctccgg tcacgatcgc
      781 cgtcttgccg ctgacgtcga acagcgagag cgggttcttg aggaagtcct cggacacgcg
      841 tctcctcttt gtgcccggcc ctgtgccggg catgcacgcc ttccgcgcct cctcaagagg
      901 tggatggccg ggaccagccc ggccatcccg cccgcggcat cacttcggcg ccgacgcgat
      961 ggcgaccagg atcgagcaaa tctcgttgcc ccggttgacg atttcgcggt tttcgttcgg
     1021 accgatgaag caggaatcgt tctccttcag cacggtctcc ttgccgccgg cgatcaccgt
     1081 caactcgccc gcaagcacga agtagacttt ttccggcggc gaagcgtccg gcccggcgcc
     1141 gccgccgggc aggaaatgcg atatgccgac gacgaggttc cgcgtgccgc cggcctctgc
     1201 accaaacagg cgcagcggcg cgcaaccgcg gtgattgggg gcatcatagg tcttggcctc
     1261 ggagaaacgc ttcacctgca tcagagtttc tctccctttt cgatccggta gctgcccttc
     1321 ggatcgacga tcgcgaccag gcggatgatg cagccgtcgc cgcgctccca gttccagggg
     1381 aagaacgcaa aggtgcagcg ccggccagtg accttgtcga tgtcgccgcc gacgttctcg
     1441 atgccgagaa tgccgttctt gaacaggatg cggtgcaccg gctcccaatc cgggaagtcg
     1501 ttcttccagt cgcggccgcc ggaccattgc ttgtattcgg cagcaagatg cggatgcagc
     1561 ggcccgttgc gctgcggccc gatggccgtc gccaagggat ggtcgttggc ctgcgtgtcg
     1621 tggccgacga ccttcacctg cttttcgacg aaccactcgc cggccgaggg gacgaagccg
     1681 ggcgcgtagc agaaatagtc ctcgctgtcc tcgtacttct tgtgccagcc ggtattgacg
     1741 atcaccacgt cgcgcgggcg caccaccttg cccgcaacct tctccaggtc gtcataggtg
     1801 atcgattccc atttcttctt tggcaacgcg acgacaatac cgctgccgaa gaaatgcggc
     1861 agcggcacct cgtcgatgaa cggtgtgccc tgcacgacat gggccggtgc gtcgatgtgc
     1921 gtggtgttgt gcatgctggt cgtgatgcgc tgcgacagca cgcccgattt cgccatgtaa
     1981 tggatgcgct cgatcttgac gtcttcgaag tacggccagt tcggagactg atagccgaaa
     2041 cgatgggaga ggttgtagaa ggagagcccc atggcgttgt tctcgttctc ctcgaacgag
     2101 acgccgcgaa tcttcttcgc cactcgcgcc tcccaccttc ctgcggcccg ccatcttgcg
     2161 gcggcgtccg gccgctatgt accaggatat ggtacaactg tatcgaattc cggtaagtgg
     2221 aacaagccgc cacgccgctg tcacgccgcg gctgccagca ggcgccgctc cagggcctcc
     2281 ttggttgcgc gcagctgcgc tgcgatgttc cgctggtgct gatagaagcg ttgcgccggc
     2341 accggcaccg agatggcgat gacattgccg agcgggtcac gggtggcgac gccggcagcg
     2401 cagatgccct gcgtgtgctc ctcgcggtcg aaggcgaccc cggtcttgcg caccgatttc
     2461 agatccttga gcaggtcctc gagccgcgtc agcgtgcgcg gcgtgcgctg ttcgtagctg
     2521 gcgccgatga gccgggcgat ggcgtcggtc tcgagtccgg cgagataggc cttgccgttg
     2581 gccgtgcagt gcagcgggaa ggtttcgccg accgccgaga ccgcacgcag ccggtgcgag
     2641 ccgatcacct ggtcgatgaa cacgagatga tccttcttga ccacggcgag gtcgaccgtc
     2701 tccttgagtt cgttcgacag ctgcaccagg aacggccgcg ctatcgccac gaaatcggtg
     2761 cgcgccgagg cggcgaggcg caggatggtc ggcccaagcc gcacccggcc gttgggcgac
     2821 gccgcgatca gaaatttctc cgccgcgagc gcggccacga tgcgctgcac cgtcgagcgc
     2881 gcaagattca cgcgctgcgc gatctgcccg agactcaagc cgtccgcctc gtcctcgagc
     2941 gcatgcagga tcgccgcggc ccgcgcaatc acctgcacct gggtcttgtc gttcaaactt
     3001 tgtccgccaa ccgcctgcat gcgctgtccc gccgtttgct ccgcgatctt gctgcctggt
     3061 ttacggtttg atacaggatc gccgcgatgc ggtacagaag gacgcgccat caaagccgcc
     3121 gccaacgaag ccggcgcatc gcccggagct gatatgatca gcaagatcgc gctcgaagag
     3181 cacttcctgt gtcccgggtt cgaggattac tggcgcgcca cgaccggtag cattgatccc
     3241 gcggtcgcca gcagcctgtt cgcgcgcttg acggacttcg gcgagacgcg cctggaggcg
     3301 atggatcgcg ccgggattgc gcgcgccgtc ctgtccatcg ccggaccggg cgtgcagagc
     3361 gagcgcgatg tggcggtcgc gagtcggcgg gcgcacgagg ccaacgattt cctagcgcgc
     3421 gaggtcgaga agcgtcccga ccgctattcc ggcttcgcgc atcttgccat gcaggacccg
     3481 caggctgcag cggatgagct ggagcgctgc ctgcgcgagc tgaagttttg cggggcgacg
     3541 gtcaacggcc acaccaacgg ccagtatctc gatcaccggg cgctgcaccc gttctgggaa
     3601 cgggccgagg cgctgcaggc gacgatctac attcatccgg cggacccgat cacgccctcg
     3661 ccggcgctcg acggccatga cggcctgcgg cgcgccactt gggaatgggg ctttgagacc
     3721 ggctcgcatg ccttgcgcct ggtctttggc ggcgtgttcg atcgcttccc gcgggcgcgg
     3781 atcgccctcg gccatctggg cgagacgctc ccttacctgc tgtggcgttt cgacagccgc
     3841 gccaagctct accgcgtcgc cctcgagaag cggccgtcgg actacatcag gcagaatatc
     3901 gtggtgacga cgtccggaat gtgctcgccc gagccgctga actgcgcgct cgccgcactt
     3961 ggaaccgacc acgtgatgtt cgccgccgac tacccgttcg agtcggcgca ggaagcgggg
     4021 cagttcctgg acgaagtacc gctcgcgcac ggtgtgcgcg aagacgtcgc gttccgcaat
     4081 gccgtctcgc gcctcggact gccgacccct taaagcggaa agcgtttgcc tgcagattgg
     4141 gggcaccgcg agaagcgcgg agcgctgtca attggacgcc aggcaattgc gcgccattgc
     4201 gaccgagacc gctgccgcct caacaaaaaa attctcggcc gcgccgcgcg cggccgagat
     4261 tgttgtttgc cgcgaaacct cagttgtagt tcttctcgca gggcgggttg tcgcgtccgg
     4321 gtggaatgaa cttgtcgtac accgccttgg agaagccgag ccgctgctgc acgttgggta
     4381 cggtcttgac gagcttggag accagttcac ctttgtcgtc cttaacgacc tcggtgacaa
     4441 agctggtgcc gatcgcctgg cgattttcgt cgagcttgat cattccgttc ggcgcgtcga
     4501 gcaccatgct ctgcagcgct gcgcggaact tcttgttgcc gtcgctgagt tcgcctttga
     4561 cctcgtcgag cgccttgaac acggcgtccg ccgagttgta gtagctgatc gccagaagcg
     4621 atgggctgcc gaacggattc ttgaaatacc cctctttcgg catctgctgg taggccttca
     4681 cgaaagcctg ccatttcggg cttgggtcgg cgtcagccaa gccgcttgcg gcaggcgtgc
     4741 cgatcagagc gtccttggcc ttgcccttcg acgacagcac ggtctggtcg accatgatcg
     4801 agccgccgat gaggtgggca ttgccgcccg cctgttggta ctggttgagg aagttc
//
LOCUS       DATMQB010000093        22058 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_28184, whole genome shotgun sequence.
ACCESSION   DATMQB010000093 DATMQB010000000
VERSION     DATMQB010000093.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 22058)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22058)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22058
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_28184"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            74..1450
                     /locus_tag="VNY79_02965"
     CDS             74..1450
                     /locus_tag="VNY79_02965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-efflux pump"
                     /protein_id="HWX71441.1"
                     /translation="MNEKEKAALVSIAASAGLTAAKAAIGLLTGSLAILSEAGHSLID
                     LAATVLTYFAVRISGKPADAEHQYGHGKVESVTALVETAFLFVLGAIVVFEAAQRLLA
                     ERTVAVEATPAAFFVIAASIAVDFLRARALDRVAKRTMSQALEADALHFRSDMVSSIA
                     VLVGLIGVALGYLRADAAAAIVVAIFICVAGWRLGRRTIDTLTDTAPAGVSERIAAIA
                     RSVPGVVAVERVRARHGGAVLFVDLGVGVSRTLPLDRVAAIKERATRAIRAAMPETEV
                     TITTEPRALDDETVRERVILIARNRGLAVHHVAVQAIADRLSVSTDLEVDGTLALAAA
                     HDIASRLEESIREELGPNVEVETHIEPLPAVVLAGRDAPPARVGAIGDALAALASEVS
                     GLGEMHDVRVRETADGEIVNFHCRLDPAVTVSAAHELVDAVERGLRRRFPTIRRVIGH
                     AEPRPSGG"
     gene            2332..4596
                     /locus_tag="VNY79_02970"
     CDS             2332..4596
                     /locus_tag="VNY79_02970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TOMM precursor leader peptide-binding protein"
                     /protein_id="HWX71442.1"
                     /translation="MTGNRDNGFPQFDSKDVPQFTQNFSVYVLPPDAVCLYSEDRKFF
                     LRGELYCALADAIAAGRSFRQIVRDLEKKFPADKIHEALKRLLDRRYIVSKRRSSANP
                     TAAAYWASLGLPPETAEKNLQRCRVRLQSVDVKGAKELAAALGKLGVRVVKGAADLTV
                     TLANDYLDGKLGELNQQHLAKSTPWLLVQPSGIFPLVGPVFRPRESACWVCLAHRMQR
                     NREVRTLLNWTGVRPVADSPLSRDTLGQNSIELAAVEIAKAIATDFRTELRDHIMSLD
                     LLGATIAKHYLPRRPQCPACGSKKLRDPRRAPVPIELAAGAKLVMTSGGYRSIPSRAT
                     VARYRKHVSPLTGVVSRLERIEADLPLNTNWRAAHNFSAPAENVDQLRAGLSGGSFGK
                     GSTAEQGEASALMEAIERYSGIYQGDEIRVRRRFTDFPAGDAILPNEVLLFSDAQYRL
                     QAPPSNSDEMPTPDPFDRSALIDWSPVWSLRDERFKYLPTSLLYFFYNDGSGRDHFHA
                     DSNGCAAGNTLEEAIVQGFLELVERDSYAIWWYNRVQRPAVDLGQFDDSYVRDLQSQL
                     AETGRRLWMLDITTDLGIPSFVAMSHSTDGGGDFVEYGSGSHFDARIAVLRSLTEVNQ
                     FLSIGLVGGRDTGSTDSDGAGPFLLRDHPYLIPNGNSGMRPDLGATFAGLDKREQVMA
                     CVEFAKRQGLDFLVLDQTRPDIEVPVVRVIVPGLRHFYRRFAPGRLYDIPVKLGWRDR
                     PMLEGEVNPMHPHT"
     gene            4657..6090
                     /locus_tag="VNY79_02975"
     CDS             4657..6090
                     /locus_tag="VNY79_02975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SagB family peptide dehydrogenase"
                     /protein_id="HWX71443.1"
                     /translation="MARLPGHVALDTQASGEIVARIDGYAENLGKFSARAANRAEGLR
                     SGLSLGSIERDGSDTDKEVHLLVRRLARRGLLEYRLARSPNGEDEVVIEPQVPAYWPR
                     MPPLGSDDVLVLSRFAYLRRRANAMVLESPRAGALFKIGNPQIAAALASLSAPQQIRR
                     FGRRADFPGAELLALLVDCQILFKVDAAGDKVLRAAEGDDNLVVWDFHDLLFHARSTE
                     GRHANPVGGLYPHVGIVTPPPAVRPPWPGRKLDLGKFSAADNEAVSPAVKLLRERRST
                     RDFDDQRPITLAELARFLDRTARVQSTWTSRLDLGGEGRGGGPMLAYTARPYPSGGSS
                     YELELYLAVDKCDGLARGIYHYDAGDHALAPIGAGAAELDALLREAAFAMGVSAPPQI
                     VITIAARFGRTAWKYSSIAYALILKDVGVLLQTFYLMATDMGLGGCAIGTVNIDRFAK
                     ITGIELHAEGPVGQFALGRGAEPTAPG"
     gene            complement(6116..6958)
                     /locus_tag="VNY79_02980"
     CDS             complement(6116..6958)
                     /locus_tag="VNY79_02980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020175824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HWX71444.1"
                     /translation="MDGSHGRFLWYELMTTDVAAAKAFYADVFGWGTQDASMPDSAYV
                     LFTVGEAAIGGMVDLPEEARKTGATPQWLGYVGVDDVDAAAERVALLGGAVHVPPTDV
                     PNISRFALVADPQMATLVLLRWLNPVTEQAAELGAPGRVGWHELLTSDWHEAFAFYAD
                     LFGWKKADAAVDAMGTYQDFSVGGQTLGGMFTKPPAVPIPFWLYYFGVGDIDAAARRV
                     KAGGGRILEGPIELPRGNRIARCVDPQGAMFALTAKRSENVIGYFEPTDSANPSAARF
                     FVRR"
     gene            complement(7133..8125)
                     /locus_tag="VNY79_02985"
     CDS             complement(7133..8125)
                     /locus_tag="VNY79_02985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-dependent alcohol dehydrogenase family
                     protein"
                     /protein_id="HWX71445.1"
                     /translation="MSTMRAMVLDRPHTRLVLRERPIPRPAGGEILVEVAACGVCRTD
                     LHVVDGELPNATLPIVPGHEIVGRVAAIGPGVNGLKLGERVGVPWLGSTCGTCPYCRS
                     ERENLCDHAVFTGYTRDGGYATHILADPRFCFPLPQKLDALEAAPLLCAGLIGWRCYR
                     MAGTGLALGLYGFGAAAHILAQVAAWQGRRVYAFTRPGDAASQRFATSLGAVWAGSSE
                     EPPPEPLDAAIIFAPVGTLVPLALSAVKKGGRVICGGIHMSDLPRIPYRLLWEERQIR
                     SVANLTRADAREFLALAPQAGIKMKVTRYPLIEANAALNDLRAGRFDGAAVLVP"
     gene            8308..10953
                     /gene="pepN"
                     /locus_tag="VNY79_02990"
     CDS             8308..10953
                     /gene="pepN"
                     /locus_tag="VNY79_02990"
                     /EC_number="3.4.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase N"
                     /protein_id="HWX71446.1"
                     /translation="MRTEEPRPVRLKDYRPPDWLIETVDLDVSLDPTATTVRAKLRVK
                     PNGAGAPAPLVLDGEELKLRSLALDGRPLPEGSFLATPERLTIAQPPNRPFELTIETV
                     VDPTNNTQLMGLYRAGTTYCTQCEAEGFRRITYFLDRPDVMAVYTTRIEADKGEAPVL
                     LSNGNLIAQGDVPGAGRHFAVWHDPFPKPCYLFALVGGELACVSDSFTTMSGRNVALR
                     IYVEPGKEERSLYAMDSLKRAMRWDEEAFGREYDLDIFMIVAVSAFNMGAMENKGLNV
                     FNDKYVLASPSTATDDDFARIEAIIAHEYFHNWTGDRITCRDWFQLCLKEGLTVFRDQ
                     EFSADQRSRAVERISDVRSLRAHQFVEDAGPLAHPVRPELYHEINNFYTTTVYDKGGE
                     VVRMIKALLGPDLFRKGMDLYFDRHDGEAATVEQFVKCFADVSGRDFSQFMRWYTQAG
                     TPEVVAAPHYDARAKTFRLDVTQTVPPTPGQPTKEPMVIPLTVGLVGRDGADLALALD
                     GRPLARGVVELKEAGHSFVFTGVAERPIPSLNRGFSAPIKLRLPIEPDDLRFLAAHDP
                     DPFNRWQAVQTLAMSLLTGNVSALRAGAPAREDEGLMAALAAILADRRLEPAFVALAL
                     TPPSEADIGREIGSDVDPDAVFAARKGLRAATGERLGAALAETYARMITPGPYRPDAA
                     GAGRRALRNVCLDLLAATQASDAIARALAQYDAADNMTARMAALETLSQHDRPERAHA
                     LDDFYRRYADDPLIIDKWLSLQAVIPEPATLERVRALTSHPAFSMANPNRVRSLIGAF
                     ALANHTQFNRSDGAGYDFVADIVLTLDPKNPQVAARIVGAFRSWRALEEGRRARAEAT
                     LRRVAAAPSLSRDVGDIVARTLAAN"
     gene            11316..13673
                     /locus_tag="VNY79_02995"
     CDS             11316..13673
                     /locus_tag="VNY79_02995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HWX71447.1"
                     /translation="MARADAASASLRSDSIKGLAQSIAKPAYRRLLSAEPLLRRAVPV
                     LIIAFLATICVGALVQVLEQRRQVVIGARQAIEALGDQLALALDRPGRDARATTARTA
                     DALEHALPPWAAQGGRLVLVADADGTIVASVPNDPQTIGRPVLDVLGPAQPLTTFGAA
                     AGTLEITLPDGASAYATVRALKNPLGLVAVIETTNEALANWRSTTALTVTLSATTGFV
                     VLILGFAFHWQATRAREADLIHDTVRSRIDTALNRGRCGLWDWDIARGRVFWSRSMFD
                     LLGLTAKDDLLTFGEINALVHQGDIDLFEVARQLADGTVVSIDRDFRMRHADGSWLWL
                     RARCELARQEEESSLHLIGIAVDITEQKTLVERTTAADLRLRDAIETIPEAFVLWDAD
                     NRLVLCNSNFQALHHLPDAAVTAGTSYEAVVAAGRKPIVRTTLANEDGQPPGARTFEA
                     QLDDGRWMHISERRTKDGGYVSVGTDITKLKLHEQKLVEGEKRQMATIYDLRKSQQAL
                     ERQTGELADLAGKYAEEKTRAEEANQTKSKFLANMSHELRTPLNAIIGFSEIMESAMF
                     GPLGADKYTEYSRDIRESGQYLLDVINDILDMSKIEAGGIRLNPETVELDRILADCVR
                     VIWGRANEKNLVVGSRVAPGIRFTADRRALKQIALNLLSNAVKFTQDGGKVTVRGRVR
                     GDKVTIAIEDNGIGIPRDALGKLGRPFEQVESQLTKRHQGSGLGLAIANSLAELHGGV
                     MRIRSVLGTGTMVIVRLPLEARPPARAESEFVASPPLAATDSTLP"
     gene            13757..14173
                     /locus_tag="VNY79_03000"
     CDS             13757..14173
                     /locus_tag="VNY79_03000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HWX71448.1"
                     /translation="MPQEIKHGYRALIDDAEREIETLSIEDALALHGRADVAFIDVRD
                     IRELDREGRVPGAFHCPRGMLEFWIDPASPYHKPEFAQDKRFVFFCAGGWRSALAAQT
                     AHRMGLGPVAHIAGGFGAWRKANGPLEAPAAKPKFT"
     gene            complement(14207..17179)
                     /locus_tag="VNY79_03005"
     CDS             complement(14207..17179)
                     /locus_tag="VNY79_03005"
                     /EC_number="2.7.7.89"
                     /inference="COORDINATES: protein motif:HMM:NF010706.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008882 - [glutamate-ammonia-ligase]
                     adenylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional [glutamine synthetase]
                     adenylyltransferase/[glutamine
                     synthetase]-adenylyl-L-tyrosine phosphorylase"
                     /protein_id="HWX71449.1"
                     /translation="MWRSSPAGAAVREDFAPPLAAGRGRDRLAEWLTAIGRKGAAGEK
                     LKSLLKDHPAADDLLGAVAEASPYLWDLVRADPRRTLRLLTANPDEAFAALLAEARRS
                     PAAAPRQEGVMRGLRRMKAEAALLIALADIGGAWPVARVTQALTEVAETALGAAVRYL
                     LGEAVKRGKLTPGDLQHPETGSGFIVLAMGKMGGHELNFSSDIDLMVFFDPAAAGLAP
                     EVEPGPFYVRLTRELVKLFQERTPDGYVFRIDLRLRPDPSSTQIAISTDAALDYYESR
                     GQNWERAALIKARPCAGDLAAGEKLIGDLSPFVWRKYLDYATVADVHAMKQQIHAYRG
                     HGEIAVEGHNVKLGRGGIREIEFFVQTQQLIAGGRHRELRGRSTVATLAVLAAGGWID
                     ATARDELTAAYTFLRRAEHRLQMQADEQTHTLPSDPAALGEFARFLGFLSRDEFAEAL
                     LSHLGAVERHYVRLFERAPAVLAEQQNLSFSTPEGESETLDRLAEMGFRQPRAVAAAA
                     HRWHTAIYRSLRGEQARENLDALVPVIIDQFARVQNPDAAFAAFDGFLAGLRAGGRFL
                     SLLRQNPDLIRFVALIVGVAPRLADILAHNPHVIDPLIDPSFFGSVPDEKRLAAELAQ
                     ALGETRSYEDVLDAIRQFGQERMFLIGARILSGSISAEQSGEVYARLAEVLIRALYAR
                     VDEDFIAGHGHVRGQETAIMALGRLGAREMTATSDLDLIVVYDFDAAHPESDGKRPLY
                     GPQYFARLTQRLISALTVQTNYGVLYPVDMRLRPSGRSGPLATQIEGFISYQEREAWT
                     WEHMALTRARVVCGSPEFTARVAAAIRDVLCRKRDERAVTEDVIEMRAAIATEKGDAD
                     PWDLKYAAGALVDIEFIAQYLQLVHAAAMPDILDTSTARVLEKAAQLGLLAAADAVVL
                     RGAVRLYHDLTQILRVCLPGAFDPKTASAGVLGLLARAADLPDFPALEAHVMETQRQV
                     RECFVRILGRVPGRDASS"
     gene            complement(17239..18645)
                     /locus_tag="VNY79_03010"
     CDS             complement(17239..18645)
                     /locus_tag="VNY79_03010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HWX71450.1"
                     /translation="MSALGKLLRTTAFQLTLAYLLIFILFAVSLLGYFALNTRRLITE
                     QITRTVNTEIGRLREQYNEAGIRGLVLVLDLRSRRPGSSLYLVTTPTGEGLAGNVGSL
                     EPGVLDHPGWLETSYRRIEAPDGVEHRALVQVVELPGGFRLLVGRDLEERERIYGIIS
                     NAGRWSFALVVVLGLAGGFFVSRRVLKRIDAMTDTANTIMAGDLGGRLPIAGTGDELD
                     RLAGNVNAMLERIEALMRGLKEVTDNIAHDLKTPLTRMRNRCEQALRGEQGRDYRAAL
                     ESTIAESDDLIRTFDALLMIARAESGQARGNMDEFDAAEIARDVGELYEPLAEQKGLV
                     LKIDAPAPAGVRGNRELVSQALANLVDNAIKYAGPDASKINGAAAEILVKAGADGERI
                     TLSVADRGPGIPEADRGRVVERFVRLEQSRSEPGSGLGLSLASAVARLHGGELRLEDN
                     RPGLRSIIALPRTGPAGT"
     gene            19003..20154
                     /locus_tag="VNY79_03015"
     CDS             19003..20154
                     /locus_tag="VNY79_03015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HWX71451.1"
                     /translation="MGPLAGFRIVEFAGIGPGPMAAMLFADLGANVIRLDRLSKSGLG
                     IDMPTRFQLLSRARPSVAVDLKHPDGLKLAADLVAKADALIEGFRPGTMENLGLGPEV
                     VFARNPRLVYGRMTGWGQSGPLSEAAGHDLNYLALTGALAAIGRAGSKPTPPLNLGAD
                     FGGGALYLAFGMACAMVEAQRSGKGQVVDAAMTEGAASLMTTFYGLYAAGLHKLERGT
                     NLLDSGSAIYEVYECADGQYISIAPIELKFRKVLFELLGLPYTADDGPQVRGELEELF
                     RTRTRDEWCSLLEGTDACFAPVLTMEEAPHHPHNVARGSFIEIDGVVQPGPAPRFSRT
                     PAGQPAPPRALGEGTHAALAEWGIGNERVETLFTAGVLGGSEAKRLSPA"
     gene            complement(20263..20943)
                     /locus_tag="VNY79_03020"
     CDS             complement(20263..20943)
                     /locus_tag="VNY79_03020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HWX71452.1"
                     /translation="MRLLIIEDDRDAADYLVKAFREVGHVADRATDGEEGLAMALDGQ
                     YDVLIVDRMLPKRDGLSLIGSLRSQSVETPVLILSALGQVDDRVKGLRSGGDDYLAKP
                     YAFSELLARIEALARRRGSRGEETVYRVADLELNRLSHEVSRAGQELQLQPREFRLLE
                     YLMRHAGQVVTRTMLLENVWDYHFDPQTNVIDVHISRLRSKIDKGFAQPLLHTVRGAG
                     YMIREGAR"
     gene            complement(21239..>22058)
                     /locus_tag="VNY79_03025"
     CDS             complement(21239..>22058)
                     /locus_tag="VNY79_03025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HWX71453.1"
                     /translation="GPYDDFIQIDAPVNKGNSGGPTFDVDGNVIGVNTAIFSPSGGSV
                     GIAFAIPSETVKTVVAQLRDKGTVTRGWIGVQIQPVTPEIADSLGLKKAAGALVSEPQ
                     TNSPAANAGIASGDVITSLDGAAVRDARELARKIGTMAPGTSVKLGMIHDGQEKTVTL
                     TLGTLPNEKQAANQQKEHEVPDSDVPKLGLTLAPGKADGGVVVTAVDPNGVAADHGFQ
                     VGDVILDISGKSVASPSDVRRQIADARKEGKHTLLFRVKSNAGTRFVALPLGNA"
BASE COUNT         3770 a         7366 c         7274 g         3648 t
ORIGIN      
        1 tcagtcgcgc gtaaggctcg agctggcgag atcatgatcg cttgcgtgag gccacgggac
       61 cggcgctgat ccgatgaacg agaaggaaaa ggccgcgctc gtgtcgatcg ccgcctcggc
      121 ggggctcacc gcggccaagg cggccattgg gctgctcacc ggctcactcg cgattctgtc
      181 ggaggccggc cattccctca tcgacctcgc cgcgaccgtg ctcacctatt tcgccgtccg
      241 catctccggc aagccggcag acgccgagca tcaatacggg cacggcaagg tggaaagcgt
      301 cacagcgctc gtcgaaaccg ctttcctgtt cgtgctcgga gctatcgtgg ttttcgaggc
      361 agcacagcgg ctgctcgccg agcgtaccgt tgcggtcgag gccaccccgg ccgccttctt
      421 cgtcatcgcc gcgtcgatcg ccgtggattt ccttcgtgcc cgggcgctcg atcgcgtggc
      481 caaacggaca atgagtcagg cgctcgaagc tgacgcgctg cacttccgct ccgacatggt
      541 ttcctcgatc gcggtcctgg tcgggctcat tggcgtggcg ttgggatacc tccgggccga
      601 cgcagccgcg gcgatcgtgg tcgcgatctt catctgcgtt gccggctggc ggctcggccg
      661 ccgcaccatc gacaccctga ccgatacggc gccggccggc gtgagcgagc gcatcgccgc
      721 gattgcgcgg agcgtgcccg gcgtcgtcgc ggtcgagcgg gtgcgcgcac ggcatggcgg
      781 cgccgtgctg ttcgtcgatc tcggcgtcgg cgtcagccgc acgctgccac ttgaccgggt
      841 ggcggcgatc aaggagcgcg cgacgcgcgc cattcgcgcc gccatgcccg agaccgaagt
      901 cacgatcacc accgagccgc gtgcgctcga cgacgagacg gtgcgcgagc gcgtcatact
      961 gatcgcccgc aaccgcggcc ttgccgtcca ccacgtcgcc gtgcaggcga tcgccgatcg
     1021 gttgtcggtc tcgaccgacc tcgaggtcga tgggacgctg gcgctggctg cagcgcacga
     1081 tatcgcgagc cggctcgagg agtcgatccg cgaggagctc ggcccgaacg tggaggtcga
     1141 aacgcacatc gaacccctgc ccgcggtggt tcttgccggc cgcgatgctc cccctgcgcg
     1201 ggtcggcgcg atcggcgatg cgctcgccgc gctcgcctcg gaggtctccg ggctcggcga
     1261 gatgcacgat gtgcgcgtgc gcgagaccgc cgacggcgag attgtcaact tccattgccg
     1321 cctggacccg gcggtcacgg tgagcgccgc gcacgaactc gtcgacgccg ttgaacgcgg
     1381 gttgcgccgc cgtttcccga ccatcaggcg cgtcatcggc cacgccgaac cgcggccgag
     1441 cggtggctga aatgcgcccg gcacggagaa gggcgaactt gccaagtttg gaagaaatcg
     1501 aatcaggatt gggatttgtg cagtgcatcc ttgtaatcga cgtgtcaaaa agtcggctca
     1561 cattgacgct tcgctaagga acaaggcagc tgcgcccgac tttcaacgta atcggctccg
     1621 catagtggct atgcaaaccg ataggaatga tggtacgttt ctgcgccatc cgtgaaacct
     1681 ggcttgaacg tatgggagac ccataaatgt cgaatgtgaa acaggcttcc aagcgaaagc
     1741 gtcggagtaa agccgtaccc gtgttgggag ttgctggagt atctttggcc atggccggcg
     1801 gagcttccgc agcgaccacc gggcaggcta cggatactca gtcgaatatc tctccgcgtc
     1861 acgaagtctt cctcggcgag caggaagtct ctgacgtgag cttgtcgact ttctacgtat
     1921 tcgacaagga gaacgcgaag ccccaggctg gcgaaaaggt tgcctggtgg ggcggttgca
     1981 gaggctgcgg cggttgcagg ggctgcggct ggagaggctg cggcggctgc ggcggctgcg
     2041 gcggcggctg ctgcttctct tggggacgct gtcgcgcctg ctaaacggca cggtccgaat
     2101 cctcttgccg atgcaaatcg ttctggccgg gtctttttcg acccggccag tcttatatta
     2161 tttgcggcgc cagcgcgcca acgagcgctg ataaccaatt aagcgactgc ccgtgtcgac
     2221 aagcgccggc gcgcggggta gacggtggcg ctcccgcaac agaacaatgc caaccttgca
     2281 atggtgatcc acaccggtgg tgctaaacgt cggggtcccc gtgccgacgt cttgacaggc
     2341 aatagggata acggcttccc acaattcgac agcaaagacg ttccgcagtt tacgcagaat
     2401 ttctccgtct atgtgctgcc tccagatgcc gtgtgcctct attccgagga ccggaagttt
     2461 tttcttcgcg gcgagctcta ctgcgcgttg gcggacgcca tagcggccgg acggagcttt
     2521 cgacagatcg ttcgcgatct ggaaaagaaa tttcccgccg acaagatcca cgaagccctg
     2581 aagcggctgc tcgaccggcg ctacatcgtg tcgaagcgcc gctcttccgc gaatcctacg
     2641 gccgccgcct attgggcgag cctcggcctc ccgcccgaga ctgcggagaa aaacctgcag
     2701 cggtgtcgcg tacgccttca atcggttgac gtgaaaggcg cgaaggagct tgccgctgcg
     2761 ctcggtaagc tcggggtgcg cgtggtgaag ggcgcggccg acctgaccgt cacgctggcg
     2821 aacgactacc ttgacggaaa actcggggaa ctgaaccaac agcacttggc gaagagtacg
     2881 ccctggctgc tggtccagcc ctccggcatc tttcctctgg tgggaccggt attccgcccg
     2941 cgcgagagcg cgtgctgggt ctgtcttgcg caccgcatgc agcgcaaccg ggaagtcagg
     3001 acgcttctca actggacagg cgtacgcccc gtcgccgatt ctccgctctc gcgtgacacg
     3061 ctcggacaga acagcatcga gcttgcagcg gtcgagattg cgaaggcgat cgccaccgac
     3121 tttcgtaccg agctgcgcga tcatatcatg agcctcgacc tgctgggcgc gacgatcgcg
     3181 aaacactacc tgccgcgccg tccgcaatgt ccggcgtgcg gcagcaagaa gctgcgcgac
     3241 ccgcgccgcg cgccggtgcc gatcgagctt gccgccggcg ccaagctggt catgaccagc
     3301 ggcgggtatc ggagcattcc gtcgcgggcc acggttgcgc gctaccgcaa gcacgtaagc
     3361 cccctcaccg gcgtggtctc gcggctcgaa cgcatcgagg cggaccttcc cctcaacacc
     3421 aactggcgcg ccgcgcacaa tttctctgcg cccgcggaaa acgttgatca gttgagagcg
     3481 ggattgagcg gcggcagctt cggcaagggc agcaccgcgg agcagggcga ggccagcgcc
     3541 ctcatggagg cgattgagcg ctattcggga atctaccagg gcgacgaaat cagggtaagg
     3601 cgccgattca ccgatttccc ggcgggcgat gccattctcc cgaacgaggt cctgctgttc
     3661 agcgatgcgc aataccgcct tcaggctccg ccgagcaact cggacgaaat gccgacaccg
     3721 gaccccttcg atcgctcggc gctgatcgac tggtcgccgg tgtggtcgct gcgcgacgag
     3781 cgcttcaaat acctgccaac cagccttctg tattttttct acaacgatgg ctccggcagg
     3841 gaccacttcc acgccgattc caacggctgc gccgccggca acacgctcga ggaagccatc
     3901 gtccagggat tcctggagct ggtggaacgc gattcctacg cgatttggtg gtacaatcgc
     3961 gtgcagcggc cggcggtgga cctcggtcag ttcgacgatt cctacgttcg cgatctgcaa
     4021 agtcagcttg ccgaaaccgg gcgccggctt tggatgctcg acatcaccac cgatctcggg
     4081 attccgagct ttgtcgcgat gtcgcactcg accgacggcg gcggggattt tgtcgagtat
     4141 ggttccggtt cgcatttcga tgcccggatt gccgtgctgc gctcgttgac cgaggtcaac
     4201 caattcctgt ccatcggact cgtcggcggc cgcgacacgg gaagcacgga cagcgacggc
     4261 gcgggtccgt ttctgctgcg cgaccatccc tacctgatac ccaacggcaa ttccgggatg
     4321 cggccggacc tcggcgcgac attcgccggc ctcgacaagc gcgagcaggt gatggcctgc
     4381 gtagaattcg ccaagcgcca ggggcttgat tttctggttc ttgatcagac acgtcccgac
     4441 atcgaggtcc cggtggtgcg cgtgatcgtt ccaggtttgc ggcatttcta tcgccgcttt
     4501 gctcccggcc ggctctacga cataccggtg aagctggggt ggcgcgaccg gccgatgttg
     4561 gaaggcgaag tcaatccgat gcatcctcat acctgagggc atcacggctt gcgcgcttcg
     4621 ggaaccaggc gaaggcgggc agtgaaggca accttgttgg cccgactccc cggtcacgtc
     4681 gctctcgata cgcaagcgag cggggagatc gtcgcccgca tcgacggtta tgcggagaac
     4741 ctgggaaaat tcagcgcgcg cgccgcgaat cgagcggagg gtttgcgcag cggtctatcg
     4801 ctcggttcga tcgaacgaga cggcagcgat accgacaaag aggttcacct cctcgtccgg
     4861 cggttggcca gacgcggcct gttggagtac cgcctcgcgc gatcgccgaa cggcgaggac
     4921 gaggtcgtca tcgagccgca ggtccccgcc tattggccgc gaatgccgcc ccttggcagc
     4981 gatgacgttc tcgtcctgtc gcggttcgcg tatttgcggc ggcgcgccaa tgcgatggtt
     5041 ttggaatccc cgcgcgccgg cgcgctgttc aagataggca atccgcagat cgctgccgcc
     5101 ttggcgagcc tgtccgcacc gcaacaaatc aggcggttcg gccgccgcgc ggattttccg
     5161 ggggccgagc ttctcgcttt gctcgtcgac tgccagatcc tcttcaaggt cgacgcggcc
     5221 ggcgacaaag tccttcgcgc ggccgaaggc gacgacaacc tcgtcgtctg ggattttcac
     5281 gatctcctgt tccacgcgcg cagcacggaa ggccggcacg ccaacccggt tggtgggctt
     5341 tatccacatg tcggcatcgt cactccgccg ccggcggtac ggccgccctg gccgggacgg
     5401 aagttggatc tgggcaagtt ctcggccgcg gacaacgagg ccgtctcgcc ggcggtgaag
     5461 cttctgcgtg aacgccgttc gacgcgcgat ttcgacgacc agcggccgat cacgcttgcc
     5521 gagctcgcgc gttttcttga ccgcaccgcc cgtgtccagt cgacctggac cagcaggctc
     5581 gatctcggcg gcgaaggccg aggcggcggt ccgatgctcg cctacaccgc ccggccatat
     5641 ccatcgggcg gcagcagcta cgaactcgaa ctctatctgg ctgtcgacaa gtgtgacggg
     5701 ctggcgcgcg gaatctatca ctacgatgcc ggcgaccatg cgctcgcgcc aatcggcgcc
     5761 ggcgccgccg agctcgacgc gctgttgcgg gaagccgcat ttgcaatggg ggtgtccgcg
     5821 ccgccgcaga tcgtgatcac cattgcggcg cgcttcggca ggaccgcgtg gaaatacagc
     5881 tcgatcgcct atgcgctgat cctcaaggac gtcggcgtgt tgctgcaaac attctacctg
     5941 atggccacgg atatggggct tggcggatgc gcgatcggga ctgtcaatat tgatcggttc
     6001 gcgaagataa cgggaataga actccacgcc gagggcccgg tcggtcaatt tgcgctgggc
     6061 cgcggcgcgg aaccgacggc tcccggatga cgatccggcg acggagtcgg cgcggctagc
     6121 gccgcacaaa gaaccgcgcg gctgaaggat tagccgaatc ggtcggttca aaatatccga
     6181 tgacgttttc gctccgcttt gcggtcagcg cgaacatggc gccttgaggg tcgacgcagc
     6241 gggcgatgcg gttgccgcgc ggcagttcga tcggaccctc aaggatgcgg ccgccaccag
     6301 ccttcacgcg cctggccgcc gcgtcgatgt cgccgacgcc gaagtagtag agccaaaagg
     6361 ggatcggaac cgccgggggc ttggtgaaca tgccgccgag cgtctgaccg ccgacggaga
     6421 aatcctgata cgtgcccatc gcgtcgaccg cggcgtccgc tttcttccag ccaaaaaggt
     6481 cggcgtagaa ggcaaacgcc tcgtgccaat cgctggtcaa gagttcgtgc cagccgacgc
     6541 ggcccggtgc tcccagctca gccgcctgtt ccgtgacggg gttcagccac ctcagcagaa
     6601 cgagggtcgc catttgcggg tcggcgacga gtgcaaaacg gctgatgttg gggacatctg
     6661 tcggtgggac atgcaccgct ccgccaagaa gcgccacgcg ttcggccgcg gcgtcgacgt
     6721 catcgacgcc gacatagccg agccactgtg gcgtcgcgcc ggtcttcctc gcctcctcgg
     6781 gcaggtccac catcccgccg atggccgcct cgccgacggt gaacaggaca taggccgaat
     6841 cgggcatcga ggcgtcctgc gtgccccaac caaagacgtc ggcgtagaag gccttagcgg
     6901 ccgccacgtc ggtcgtcatc aactcgtacc agaggaaacg gccatgtgag ccgtccatgt
     6961 gcacttctcc gttcgcgccg cgcttggatg taggcctcgg cggtcgctcg accgctctcg
     7021 cgtcgtccgt cacgcctgac aaattactac gacacaacgg cgcgaacccc aatcgcaagc
     7081 acaacgatcc gccccaggag atggagggct tgccggaacc gcgcgctgat gctcagggaa
     7141 cgaggaccgc ggcgccgtcg aagcggcctg cccgcagatc gttgagcgcc gcgtttgcct
     7201 cgatcagcgg atagcgcgtt actttcatct tgatgccggc ctgaggcgcc agcgccagaa
     7261 attcgcgcgc gtcagcacgg gtgaggttgg cgaccgagcg gatttggcgc tcctcccaaa
     7321 gcaggcgata gggaatgcgc ggaaggtccg acatgtgaat cccgccgcag atgacgcgcc
     7381 cgcccttctt caccgcgctg agcgccagcg gaacgagcgt cccgaccggc gcgaagatga
     7441 tcgccgcatc gagcggctcc ggtggcggct cctcggaact cccggcccag accgcgccga
     7501 gcgaggtcgc gaaacgctgc gacgccgcgt cccccggtcg cgtgaatgcg tagacgcgcc
     7561 ggccttgcca ggcagcgacc tgcgccagga tatgggcggc tgcgccgaag ccgtagaggc
     7621 cgagcgcaag ccccgtcccg gccatgcgat agcagcgcca gccgatgagg ccggcgcaca
     7681 gcaacggcgc cgcttccaag gcatcgagct tctgcggcag cggaaagcag aatctcgggt
     7741 cggcgaggat gtgcgtggca tagccaccgt ctctggtata gccggtgaag accgcatggt
     7801 cgcatagatt ttcccgctcc gaacggcagt aggggcaggt gccgcaggtc gagccgagcc
     7861 atggcacgcc cacgcgctcg ccgagcttga gcccgttgac ccccggcccg atcgctgcga
     7921 cccggccgac gatctcgtgg cccggcacga tgggcagggt cgcattgggc agttcaccgt
     7981 cgaccacgtg cagatcggtg cgacagactc cgcacgccgc gacctcgacc agaatttcgc
     8041 cacccgccgg ccgcggaatc ggccgctcgc gcagaacgag ccgcgtgtgc ggccggtcca
     8101 gaaccatcgc gcgcatggtt gacatgggaa gcgtcccgaa cgagtgacgg cgcgatggtc
     8161 tcgcgctttc aattggcgcg caaagccctt acatcaagca cgcgtaaccc ggatggggcg
     8221 cggccaatcc gggatcggtg gcgcaagctg cacaatcgtt cccgcactcg ctccgctcaa
     8281 tgcgggtatt tttctgaaag agcaatcatg cgcactgaag aaccgcgtcc ggtccgcctc
     8341 aaggattatc gtccgcccga ctggctcatc gaaaccgtcg atctcgacgt ctcgctcgat
     8401 ccgacggcga ccacggttcg cgccaagctc cgggtcaagc ccaacggcgc cggcgcgccg
     8461 gcgccactcg tgctcgacgg ggaagagctc aagctccgct cgcttgcgct cgacgggcgg
     8521 ccgctgccgg aaggaagctt tctcgccacg cccgagcggc tcactatcgc gcagccaccg
     8581 aaccggccgt tcgagctcac catcgaaacg gtcgtcgacc cgaccaacaa cacgcaactg
     8641 atgggcctct accgcgccgg cacgacctat tgcacgcagt gcgaggccga aggcttccgg
     8701 cgcatcacct acttcctcga ccgcccggac gtgatggccg tctacacgac gcggatcgag
     8761 gccgacaagg gcgaggcgcc agttctgctg tccaacggta atctcatcgc gcagggcgac
     8821 gtgcccggcg cgggccggca cttcgcggtc tggcacgatc cgttcccgaa gccctgctat
     8881 ctgttcgcgc tggtcggcgg cgagctcgcc tgcgtctctg acagcttcac caccatgtcc
     8941 gggcgcaacg tcgcgctacg catctatgtc gagcccggca aggaggagcg ctcgctctac
     9001 gccatggaca gcctcaagcg cgccatgcgc tgggatgagg aggccttcgg gcgcgaatac
     9061 gacctcgaca ttttcatgat cgtcgccgtc tccgccttca acatgggcgc gatggagaac
     9121 aagggcctta acgtcttcaa cgacaaatac gtgctggcct ccccgtcaac ggcgaccgac
     9181 gacgatttcg cccgcatcga ggcgatcatc gcccatgaat actttcacaa ctggaccggc
     9241 gaccgcatca cctgccgcga ctggtttcag ctctgcctga aggaggggct taccgtcttc
     9301 cgcgaccagg agttttccgc cgatcagcgc tcgcgtgcag tcgagcgtat cagcgacgta
     9361 cgctcgctgc gcgctcatca gttcgtggag gatgccggtc cgctggcgca tccggtgcgg
     9421 cccgagcttt atcacgagat caacaacttc tacacgacga cggtatacga caagggcggc
     9481 gaggtcgtgc gcatgatcaa ggccctgctc gggccggatc tgttccgcaa gggcatggac
     9541 ctttatttcg accggcacga cggcgaggcc gcgaccgtcg agcagttcgt aaaatgcttc
     9601 gccgacgtca gcggccgcga tttttcgcag ttcatgcgct ggtacacgca ggcgggaacg
     9661 ccggaagtcg tggcggcgcc gcactacgat gcgcgggcaa agaccttccg gctcgatgtc
     9721 acgcagacgg tcccgccgac gcccggccag ccgaccaagg agccgatggt gattccgctc
     9781 acggtcgggc tcgtcggccg cgacggcgcc gatctcgcgc tcgcgctcga tggacgcccg
     9841 ctcgcccgcg gcgtcgtgga gctgaaggaa gcgggccaca gctttgtgtt caccggagtc
     9901 gcggagcggc cgattccatc gctcaaccgc ggcttctcgg cgccgatcaa gctcaggctc
     9961 cccattgagc cggacgacct gcgcttcctc gccgcgcacg atcccgatcc gttcaaccgc
    10021 tggcaggcgg tgcagacatt ggcgatgtcg ctcctgaccg gcaatgtctc ggccctgcgc
    10081 gccggcgcgc cggcgcgcga ggatgagggg ctgatggcgg cgctggccgc gatcctagcc
    10141 gaccggcgcc tcgagcccgc gttcgtcgcg ctcgcgctta caccgccgag cgaggccgat
    10201 atcggccgcg agatcggcag cgacgtcgat cccgacgcgg tgttcgccgc gcgcaaagga
    10261 ctgcgcgccg cgaccggcga acggctcggc gctgcgcttg cggaaaccta tgcgcgcatg
    10321 atcacgcctg gcccctatag gcccgacgcc gcgggcgccg gacggcgcgc gctgaggaac
    10381 gtctgcctcg acctcttggc ggcgacgcag gccagcgacg cgatcgcccg ggcgctggcg
    10441 cagtatgacg cggccgacaa catgaccgcg cggatggcgg cactcgagac attgtcgcag
    10501 catgaccggc cggagcgcgc gcacgcgctt gacgatttct accggcgtta cgccgacgat
    10561 ccactgatca tcgacaaatg gctttcgctg caggccgtca ttcccgagcc ggctaccctc
    10621 gagcgcgtgc gagcgctgac ctcgcacccc gctttctcca tggccaatcc caatcgcgtg
    10681 cgctccctca tcggcgcgtt cgcgctggcg aaccacaccc agttcaaccg cagcgacggc
    10741 gccggctacg acttcgtcgc cgatatcgtg ctcacgctcg atccgaaaaa cccgcaggtg
    10801 gcggcgcgca tcgtgggcgc attccgctcc tggcgcgctc tcgaagaagg gcggcgcgcg
    10861 cgcgctgagg cgacgctgcg gcgtgtcgcg gcagcgccgt cgctctcgcg cgacgtcggc
    10921 gacatcgtcg cccgcacact cgccgccaac tgagcgccca cgccgatcat tgtgagcgcg
    10981 cgccagctgc cgagcccggc gatcttggag catgatctgg aaaagtggac accggttttc
    11041 cgacaagacc atgctcaatt gaggaaaacc ggagcgcaat cggttcaact tgaagcgatt
    11101 gcgctccacg tcgcccaccc tgcttgacag atttccggat cggtcgatgc tcgctcgcgc
    11161 ggcgaccaaa tagctcggga tagctccgac aaaaatattg actcgcgact ctcgacaaat
    11221 cggcgagcat cgattcttat caaggtgatt cggaaagtga tgcggcacat ccttccgagc
    11281 gcgggcggcg gggacggtcc gaacggaggc aggcgatggc gcgcgccgac gcggcgagtg
    11341 cgtccctacg ttccgattcc atcaagggat tggcacaatc gatcgccaag ccagcctatc
    11401 ggcggctgtt gagcgccgaa ccgctgctgc gccgtgccgt tccggttctc atcatcgctt
    11461 ttcttgccac catctgcgtt ggcgcgctgg tgcaggtgct cgaacagcgc cgccaggtcg
    11521 tcatcggcgc ccggcaggcg atcgaggcgc tgggcgacca gctcgctttg gcgctcgatc
    11581 gcccggggcg cgatgcccgc gcgaccacgg cgcgcaccgc cgatgcgctt gagcacgcgc
    11641 tgccgccatg ggcggcgcag ggcggccggc tggtgctcgt ggccgatgcc gacggtacca
    11701 tcgtcgccag cgtaccgaac gacccgcaga cgatcgggcg cccggtgctc gacgtgctcg
    11761 gaccggccca gccgctgacc accttcggcg ctgccgcagg cacgctcgag atcacgctgc
    11821 ccgacggcgc cagtgcctac gccaccgtgc gggcgctcaa gaacccgctc ggcctggtcg
    11881 ccgtcattga aacgacgaac gaagcgctgg cgaactggcg atcaacgacc gcactcaccg
    11941 tgaccctctc ggcgacgacc ggcttcgtgg tgctgatcct cggcttcgcc ttccactggc
    12001 aggcgacgcg ggcgcgcgag gcggacctca tccacgacac ggtgcgcagc cgcatcgaca
    12061 ccgcactcaa ccgcggccgc tgcgggctgt gggattggga cattgcgcgc ggccgcgtgt
    12121 tctggtcgcg ctcgatgttc gaccttctcg gcctcaccgc aaaggacgat ctcctcacct
    12181 tcggcgagat caacgcgctg gtgcaccaag gcgacatcga cctcttcgag gtggcgcggc
    12241 agctcgccga cggcacggtc gtctcgatcg atcgcgactt ccgcatgcgc cacgccgacg
    12301 gaagctggtt gtggctgcgg gcgcgctgcg aactggcgcg ccaggaggaa gagagttcgc
    12361 tgcacctcat cggcatcgcc gtcgacatca ccgagcagaa gaccctggtc gagcggacga
    12421 cggcggcgga tctgcggctg cgcgacgcga tcgagaccat cccggaagcg ttcgtgctct
    12481 gggacgccga caaccggctg gtgctgtgca actcgaattt ccaggccctg catcacctgc
    12541 ccgacgctgc ggtgaccgcc ggcacctcct acgaggcggt ggtggccgcc gggaggaagc
    12601 cgatcgtccg caccacgctc gccaacgaag acggtcagcc gccgggcgcg cgcaccttcg
    12661 aagcgcagct cgacgacggt cgctggatgc acatcagcga acggcgcacc aaggatggcg
    12721 gctacgtctc cgtcggcacc gacatcacca agctcaaact gcacgagcag aagctcgttg
    12781 agggcgagaa gcggcagatg gcgacgatct acgacctgcg caaatcgcag caggcgctgg
    12841 aacgccagac cggggaactc gccgacctcg cggggaaata cgccgaggaa aagacgcgcg
    12901 ccgaggaagc aaaccagacc aagtcgaagt tcctggccaa tatgagccac gagctgcgca
    12961 cgccgctcaa cgccatcatc ggcttctccg agatcatgga atcggcgatg ttcgggccgc
    13021 tgggcgcgga caagtacact gaatattcgc gcgacatccg cgaaagcggc cagtacctgc
    13081 tcgacgtcat caacgacatt ctcgacatgt cgaagatcga ggccggcggc atccgcctca
    13141 atcctgaaac cgtcgagctc gaccgcatcc tggcggattg cgtgcgcgtg atctgggggc
    13201 gcgcgaacga aaagaacctg gtcgtcggct cgcgggtcgc acccggcatc cgcttcacgg
    13261 ccgatcgccg cgcgctcaag cagatcgcgc tcaatctcct gtccaatgcg gtgaaattca
    13321 cgcaggatgg cggcaaggtc accgtgcgcg ggcgcgtacg cggcgacaag gtcaccatcg
    13381 ccatcgagga caacggcatc ggcatcccaa gggacgcgct gggcaagctc gggcggccat
    13441 tcgagcaggt cgaaagccag ctgaccaaac ggcaccaggg ctcgggcctc ggcctcgcca
    13501 ttgccaattc gctggccgag ctgcacggcg gcgtgatgcg catccgctcc gtcctcggca
    13561 ccggcacgat ggtcattgtg cggctgccgc tcgaagcacg gccgccggcg cgcgcggaga
    13621 gcgagtttgt cgcctcccct cccctcgccg ccaccgactc gaccttgccg tagcgtcgcc
    13681 gccggtggta tgggcggggc cacgcggagc ccgttttcgc caagcttcgc gggcaagtat
    13741 cgggacggac agccccatgc ctcaagagat caagcacggc tatcgtgcgc tcatcgacga
    13801 cgccgagcgc gagatcgaga ctttgtcgat cgaggacgcc cttgctttgc acgggcgcgc
    13861 tgacgtcgcc ttcatcgatg tgcgcgacat ccgcgaactc gaccgcgagg gccgtgtgcc
    13921 cggcgcgttt cattgtccgc gcgggatgct cgaattctgg atcgacccgg cgagccctta
    13981 ccacaagccc gagttcgctc aggacaagcg tttcgtgttc ttttgcgccg gcggctggcg
    14041 ttcggcgctc gccgcgcaaa ccgcccatcg catgggcctt ggtcccgtcg cgcatatcgc
    14101 gggcggcttc ggcgcgtggc gcaaggccaa cggtccgctc gaagcgccgg cagccaagcc
    14161 gaaattcact taggcgcgcc cgttcctttc cactgtcgcc cgcgtctcag gacgatgcgt
    14221 cgcgaccggg caccctgccg agaatccgga cgaagcattc ccgcacctgg cgctgcgttt
    14281 ccatgacatg ggcctcgagt gccgggaaat ccggcagatc ggcggcgcgg gcgaggaggc
    14341 cgagcacgcc ggcgctcgcc gtcttcggat cgaaagcgcc gggcagacag acccggagaa
    14401 tctgcgtgag atcgtggtag agccgcaccg ccccgcgcag tacgacggcg tcagcagcag
    14461 cgagcaggcc aagctgggcg gccttttcca ggacgcgcgc cgtcgaggtg tcgagaatgt
    14521 cgggcatcgc cgcagcgtgc acgagctgta gatattgggc gatgaactcg atatcgacga
    14581 gtgcgccggc cgcgtatttg aggtcccaag gatcggcgtc gcccttctcc gtggcgatcg
    14641 cggcgcgcat ctcgatcaca tcctcggtga cggcgcgctc gtcgcgcttg cggcagagca
    14701 cgtcgcggat cgccgccgcg acgcgtgcgg tgaattccgg cgatccgcag acgacgcgcg
    14761 cgcgcgtcag tgccatatgc tcccaggtcc aggcctcgcg ttcctggtaa ctgatgaagc
    14821 cttcgatctg ggtcgccagc ggaccggagc ggccggaagg ccgcagccgc atgtcgaccg
    14881 gatagagcac cccgtaattg gtctgcacgg tcagcgcgct gatcaggcgc tgggtgagcc
    14941 gcgcgaagta ctgcgggccg tagagcggac gcttaccgtc ggactccgga tgtgcggcgt
    15001 cgaaatcgta gacgacaatg aggtcgaggt cggacgtcgc cgtcatctcc cgcgcgccga
    15061 gccggccgag cgccatgatc gccgtctcct ggccgcggac gtggccgtgc ccggcaatga
    15121 agtcttcgtc gacgcgggca tagagcgcgc ggatgagcac ctcggcgagg cgggcgtaga
    15181 cctcgcccga ctgctcggcc gagatcgacc cggacaggat tcgcgccccg atcaggaaca
    15241 tgcgctcctg gccgaactgg cggatcgcat caagcacgtc ctcgtagcta cgggtctcgc
    15301 cgagcgcttg cgccagctcc gccgccagcc gcttctcgtc cggcaccgag ccgaagaagc
    15361 tcgggtcgat gagagggtcg atgacgtggg ggttgtgcgc caggatatcg gcgaggcggg
    15421 gcgcaacgcc gacgatcagg gcgacgaaac ggatcaggtc cggattttgc cgcagcagcg
    15481 agaggaagcg cccgccagcg cgcagcccgg cgaggaagcc gtcgaaggcg gcaaatgccg
    15541 catcgggatt ttgcacgcgg gcgaactggt cgatgatgac aggcaccagc gcgtcgagat
    15601 tttcccgcgc ctgctccccc cgcagcgagc ggtagatggc ggtgtgccag cgatgcgccg
    15661 ccgccgccac cgcgcgcggc tgccggaagc ccatttccgc gaggcggtcc agcgtctcgc
    15721 tctcaccctc cggcgttgaa aaagaaagat tctgctgctc ggcgaggacc gcaggcgcgc
    15781 gttcgaacaa cctgacatag tgccgctcca ccgcgcccaa gtgggaaagc aaagcttcgg
    15841 caaactcgtc ccggctgagg aaaccgagaa agcgcgcgaa ttcgccgagc gcggccggat
    15901 cggagggcag cgtgtgggtc tgctcgtcgg cctgcatctg caggcggtgc tcggcccggc
    15961 gcaggaatgt gtaagccgcg gtgagctcgt cgcgcgcggt ggcatcgatc catccgccgg
    16021 cagcgaggac ggcgagggta gcgacggtcg agcgcccgcg cagctcgcgg tgacggccgc
    16081 cggcgatcag ctgctgcgtc tgcacgaaaa attcgatctc gcggatgccg ccacggccga
    16141 gcttgacgtt atggccttcg acggcgatct cgccatgacc gcggtaggcg tggatctgct
    16201 gcttcatcgc gtgcacgtcg gcgaccgtcg cgtagtcgag atacttgcgc cagacgaacg
    16261 gggagaggtc gccgatgagc ttttcgccgg cggcgagatc gccggcgcag ggccgcgcct
    16321 tgatcagcgc cgcgcgttcc cagttctgcc cccggctttc gtagtagtcg agcgcggcgt
    16381 ccgtggagat cgcgatctgc gtcgaggacg gatcggggcg aagccgcaag tcgatgcgaa
    16441 agacgtaacc gtcgggcgtg cgctcctgaa agagcttcac cagctcgcgc gtcaggcgca
    16501 cgtagaacgg cccgggctca acttcaggcg cgagcccggc ggcggccgga tcgaagaaga
    16561 ccatgagatc aatgtcgctg gagaagttga gctcgtgacc gcccatcttg cccattgcca
    16621 gcacgatgaa gccggaaccg gtctcgggat gttgcagatc gccaggcgtg agcttgccgc
    16681 gtttgaccgc ctcgccaagg agataccgca cggcggcgcc gagcgcggtc tcggcgacct
    16741 cggtgagcgc ctgcgtcacg cgcgcgaccg gccaggcgcc gccgatatcg gcaagcgcga
    16801 tgagcagcgc cgcttccgcc ttcatgcggc ggaggccgcg catgacgcct tcctgccttg
    16861 gcgccgccgc gggagaacga cgcgcctccg cgagcagcgc agcgaacgcc tcgtccggat
    16921 tggcggtgag caggcggagc gtgcgcctcg gatccgcgcg cacaaggtcc caaagatacg
    16981 gggaggcttc ggcgacggcc ccgagcaagt cgtcggccgc cggatgatcc ttgagcaggg
    17041 atttgagctt ctcgccggcg gcgcctttgc ggccgattgc cgtgagccat tcggcgaggc
    17101 ggtcgcggcc ccgccccgcg gcgagcggcg gcgcaaaatc ttcgcgaacg gcggcgccgg
    17161 ccgggcttga ccgccacacc aatgccgact cgtcgagatt ctgtttcggc cgttttttcc
    17221 cggattgagg ccgccgcatc atgtccccgc cggcccggta cgcggcaggg cgatgatgct
    17281 cctcaacccc ggacgattgt cctcgagcct gagttcgccg ccgtgcaggc gggcgaccgc
    17341 ggaggcgagg ctcaggccca ggccggagcc gggctccgac cggctctgct cgagccgcac
    17401 gaagcgttcg acgacgcggc cgcgatcggc ttcgggaatg ccgggaccgc gatccgccac
    17461 gctgagcgtg atgcgctcgc cgtcggcgcc ggctttcacc aggatttcgg cggcggcgcc
    17521 attgatcttg ctcgcgtccg ggccggcata tttgatcgcg ttgtcgacca ggttcgccag
    17581 cgcctggctt accaattcgc gattgccgcg cacgcccgcg ggcgccggcg cgtcgatctt
    17641 cagcacaagc cccttctgtt cggcgagcgg ctcgtacaat tcgccgacgt cgcgggcgat
    17701 ctcggccgcg tcgaactcgt ccatgttgcc gcgtgcctgc cccgattcgg cgcgcgcaat
    17761 catcaacaac gcgtcgaagg tgcgaatgag gtcgtcggat tcggcgatcg tcgattcaag
    17821 cgccgcccgg tagtcgcggc cctgctcgcc gcgcagcgcc tgctcacagc ggttgcgcat
    17881 ccgcgtcagc ggcgtcttga ggtcatgggc aatgttgtcg gtgacctcct tgagaccgcg
    17941 catgagcgcc tcgatgcgtt cgagcatggc gttgacgttg ccggcgaggc ggtcgagctc
    18001 gtcgccggtg ccggcgatgg gcagacggcc gccgagatcg ccggccatga tcgtgttcgc
    18061 cgtgtcggtc atggcgtcga tgcgcttgag cacgcggcgg ctgacgaaga agccgccggc
    18121 gagcccgagc acgaccacga gcgcaaacga ccaacgcccg gcattggaga tgatgccgta
    18181 gatgcgctcg cgttcctcga ggtcgcgccc gaccagcagc cggaagccgc cgggcagctc
    18241 caccacctga acgagcgccc gatgctcgac gccgtccggc gcctcgatgc ggcgatagga
    18301 ggtttcgagc caccccgggt gatcgagaac tccgggttcc agcgagccga cgttgccggc
    18361 aagcccctcc ccggtcggcg tcgtgaccag atagaggctc gaccccggcc ggcgcgagcg
    18421 caaatcaagc acgagcacga gccccctgat ccccgcttcg ttgtattgtt cacgcaggcg
    18481 gccgatttca gtattgacgg tacgggtgat ctgctcggtg atgaggcgcc gcgtgttgag
    18541 cgcgaaataa ccgagcagcg acaccgcgaa caggatgaaa atcaagagat aggcgagcgt
    18601 cagctggaac gccgtcgtgc gcaggagctt gccgagcgcg gacacggatc agggcctcgc
    18661 tttgcctgtc gcgctccggc acggcgggcg aagagcttgc atgaaggcaa gcggaaattc
    18721 ggatggcttg cgaagtacca tgtcactcaa aaatttcgtt ctggcgacgc gggcggaggc
    18781 caccgcgccg gtgccccgga tcggccccaa cgccaaaatg aaatatgcct ttccagttgc
    18841 caatgaaata tgcacacact gcagtctcgg cacagccgtc cgccgggcaa ccggagaacg
    18901 acatgagcga gcgggcgcaa gcgcgccgaa attctgatcg gaactggtct cttttgaact
    18961 actcgccact gcgctgcagg cgcggcaatc aggatcgggg tgatgggacc tctggccggt
    19021 tttcggatcg ttgaattcgc tgggatcggc ccggggccga tggcggcgat gctgttcgcg
    19081 gacctcggcg cgaacgtcat ccgcctggac cggttgagca agagcgggct tggcatcgac
    19141 atgccgaccc gctttcaact cctgtcccgc gcgcgcccct cggtggcggt cgatctgaag
    19201 cacccggacg ggcttaagct cgccgcggat cttgtcgcca aggctgatgc tctgatcgaa
    19261 ggttttcggc cgggcacgat ggaaaatctc ggtctcggac ccgaggtggt gttcgcgcgc
    19321 aacccgcgtc tcgtctacgg gcgcatgacc ggatgggggc agtccgggcc gctctccgag
    19381 gcggccgggc atgacctcaa ctatctcgcc ttgaccggcg ccctggcggc catcggccgc
    19441 gccggctcca agcccacgcc gccgctcaat cttggcgcgg attttggcgg cggggcgctc
    19501 tatctcgcct tcggcatggc gtgcgccatg gtggaggcgc agcgatccgg caagggccaa
    19561 gtggtcgacg cggcgatgac ggaaggcgcc gcctcgctga tgacaacctt ctacgggctc
    19621 tatgcggccg gactgcacaa gctcgagcgc gggacgaacc tgctcgattc cggatcggcg
    19681 atctacgaag tctacgaatg cgcggacggc caatacattt cgattgcgcc gatcgagctc
    19741 aagttccgca aggtgctgtt cgagctgctc ggcctgccct atacggccga tgacggcccg
    19801 caggtgcgcg gcgagctgga agaacttttc aggacgcgga cgcgggacga atggtgctcg
    19861 ctgctggagg gtacggacgc ctgcttcgcg ccggttctca ccatggaaga ggcgccgcac
    19921 catccgcaca acgtcgcccg cggctccttc atcgaaatcg atggcgtggt gcaaccgggg
    19981 cccgcgccgc gcttcagccg cacgcctgcc ggacagcccg caccgccacg cgccctcggg
    20041 gaagggacgc acgcggcgct cgccgaatgg ggcattggga acgagcgggt cgagacgctc
    20101 ttcaccgcgg gcgtgctcgg cggctcggag gcgaagcgcc tttcgccggc ctagctttgc
    20161 ctgtcggcga tttctcacgg ccccgtaacg gcccccgtcg ccacgacgct gtcccgcgcg
    20221 cacatcgcgg agatcatggc accgatgagg gcgtgacggc agctacctcg ccccctcgcg
    20281 gatcatgtaa cccgcgccgc gcacggtgtg cagcagcggc tgggcgaaac ccttgtcgat
    20341 cttcgaacgc agccgcgaaa tgtgcacgtc gatgacgttg gtctgcgggt cgaaatgata
    20401 gtcccagaca ttctccaaca gcatggtgcg ggtgaccacc tggccggcat gccgcatcag
    20461 atattcaagg agacggaatt cgcgcggctg cagctgcagt tcctgcccgg cgcggctcac
    20521 ctcgtgcgac aggcgattga gctcgagatc ggcgacccga tagaccgtct cctcgccgcg
    20581 gctgccgcgc cggcgcgcga gcgcctcaat gcgcgccagc agctcggaga aggcataggg
    20641 tttagccaga tagtcgtcgc cgccgctgcg cagccccttc acccggtcgt cgacctggcc
    20701 gagagcggac aggatgagca cgggcgtctc gaccgactgg ctgcgcaagc tgccgatgag
    20761 cgaaagacca tcgcgcttcg gcagcatgcg atcgacgatc agcacgtcgt attggccgtc
    20821 gagcgccatc gccaggcctt cttcgccgtc ggtcgcccga tcggcgacgt ggcccacctc
    20881 gcggaacgcc ttgacgaggt agtcggcagc gtcgcggtca tcctcgatga tgagaaggcg
    20941 catggtcgct cgctgcacct gcggaggctg atcggccagc cggcctgtca cgccatcaat
    21001 attgtctcgc atgggtcgcg cagcaatgca ctgccttcaa aacgaaacat cgccccgcaa
    21061 acgtgagaaa aaagggtggc gagagctaac tcgccaccct ctcgaccagc tccaccccgg
    21121 cgggggcgac ggatgccggg agcggaaccg gtaacggcgg ggacgggcct tgcggcccgc
    21181 ccccagggta cgcccgccag cgggggcgac ggatgccggc ggatcgcccc attacttgtc
    21241 aggcattgcc gagcggaagc gcgacgaagc gtgtgcctgc gttcgacttc acccgaaaca
    21301 acagtgtgtg cttaccctcc ttgcgcgcgt ccgcgatctg cctgcggacg tccgacgggc
    21361 tcgcgaccga tttgccgctg atgtcgagaa tgacgtcgcc gacctggaag ccgtgatcgg
    21421 cggccacccc gttcgggtcg acggcggtga cgaccacacc gccatcggcc ttgcccggcg
    21481 ccagcgtgag gccgagcttc ggcacgtcgc tatcgggaac ttcgtgctcc ttctgctggt
    21541 tcgccgcctg cttttcattc ggcagcgtgc cgagcgtcag cgtcaccgtc ttctcctgac
    21601 cgtcatggat catgccaagc ttcaccgagg tgcccggcgc catcgtgccg atcttgcgcg
    21661 ccagctcgcg cgcatcgcgg acagccgcgc catcgagcga ggtaatgacg tcgccactcg
    21721 cgatgccggc gttggccgcc gggctgttcg tctgcggctc cgagacgagc gcgccggcgg
    21781 ccttcttcag gccgaggctg tcggcgatct cgggcgtgac cggctggatc tggacgccga
    21841 tccacccgcg ggtgacggta cccttgtcgc gcaactgggc gacgacggtc ttcaccgtct
    21901 cggaggggat cgcgaaagca ataccgaccg agccgccgga gggagagaag atcgcggtgt
    21961 tgacgccgat gacattaccg tcgacgtcaa aggtcgggcc gccggaattc cctttgttga
    22021 ccggcgcatc gatctggatg aagtcgtcat agggaccg
//
LOCUS       DATMQB010000094         5102 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_647274, whole genome shotgun sequence.
ACCESSION   DATMQB010000094 DATMQB010000000
VERSION     DATMQB010000094.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5102
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_647274"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(21..404)
                     /locus_tag="VNY79_03030"
     CDS             complement(21..404)
                     /locus_tag="VNY79_03030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly accessory protein"
                     /protein_id="HWX71454.1"
                     /translation="MAAVRPRPQVVRLTDAAAERIKAVMAKAESRIAAVRVGVKNGGC
                     AGMAYTMEYADKINPLDEVVEDKGVRILIDPKAVLFLLGTEMDYKVDKLSAQFVFNNP
                     NQTSACGCGESVQLEPASGEAAAVH"
     gene            complement(537..842)
                     /locus_tag="VNY79_03035"
     CDS             complement(537..842)
                     /locus_tag="VNY79_03035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009797059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system Fe-S cluster assembly protein"
                     /protein_id="HWX71455.1"
                     /translation="MARLTDEIVGALKTVYDPEIPADIYELGLIYKVDIDDDRVVKVD
                     MTLTTPNCPSAAELPIMVENAVASVPGVREAKVSIVWDPPWDASRMSDEARAVLNMW"
     gene            complement(923..2164)
                     /locus_tag="VNY79_03040"
     CDS             complement(923..2164)
                     /locus_tag="VNY79_03040"
                     /EC_number="2.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_function: GO:0031071 - cysteine desulfurase activity
                     [Evidence IEA];
                     GO_process: GO:0006534 - cysteine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HWX71456.1"
                     /translation="MHDALTNGTYDVNRIRADFPILATQVYGKPLVYLDNAASAQKPR
                     AVLDRLDRAYTAQYANVHRGLHYLANEATEAYEGAREKVAAFLNAGRKEEVIFTRNAT
                     EAINLVAYTFGRERIKAGDEIVLSIMEHHSNIVPWHFLRERQGAVIKWAPVDDEGHFL
                     VDEFEKLIGPRTRLVAVTHMSNMLGTLVPVKEVTRIAHAHGVPVLIDGAQAAVHVDVD
                     VRDIDCDFYAFTGHKTYGPTGIGVLYGKYAHLAAMPPFNGGGEMIREVFEDRITYGDP
                     PHKFEAGTPSIVQAIGLGAALDYVASVGKARIRSHEEGLMRYAHDRLREINSLRIFGT
                     TKDKGPIVSFEIKGAHPHDVATIIDRSGVAVRAGTHCVMPLLARFGLTASCRASFAMY
                     NTPAEVDRLAQALLKAQDFFA"
     gene            complement(2157..3494)
                     /gene="sufD"
                     /locus_tag="VNY79_03045"
     CDS             complement(2157..3494)
                     /gene="sufD"
                     /locus_tag="VNY79_03045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013949294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005198 - structural molecule activity
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HWX71457.1"
                     /translation="MADVKVIKTAAETALAHAYAQVRTRLPGDGAIAAQRAAAFDVFA
                     REGLPHRRVEEWKYTDLRALMREAKPLASPPDAAAKARAKSAGAMIGDVECRRLVFVD
                     GAFVPELSDTAALEPGLTVGSLADALADNDAAVVEKIGTLAPASDVAVALNTALMGDG
                     AVIRIGAGSTTERPLHLLFVASEKPAATFVRSLVVVEQGARAMLIESHEGPAGSEYQV
                     NAALELFVGDEAHVDHVKLIGEGADALHVSTLAAAIGGKARFNAFTFTIGGAVVRNQL
                     FLRFDGEETVAGIRGASLLNGRQHADTTLVATHIARGCQSRELFKTVLDDEAHGVFQG
                     RIIVRQGAQQTDAKMMTQALLLSDRAEADNKPELEIFADDVQCGHGATAGALDEELKF
                     YLMARGIPAAEAEALLIQAFLGGAVEGIEHAGLREALMEQVAAWLKARVFRHA"
     gene            complement(3534..4292)
                     /gene="sufC"
                     /locus_tag="VNY79_03050"
     CDS             complement(3534..4292)
                     /gene="sufC"
                     /locus_tag="VNY79_03050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HWX71458.1"
                     /translation="MPLLEIKNLHVEIDGKEILKGLDLVVEPGEVHAIMGPNGSGKST
                     LAYVLAGKPDYEPTAGEVLLDGKNLFDMGPDARAAAGLFLAFQYPLEIPGVATMTFLR
                     TALNAQRKKRGEAELSTPEFLKKVREVAGKLGINQEMLRRPVNVGFSGGEKKRNEILQ
                     MALFEPRLAVLDETDSGLDIDALKIVSDGVNRLRAPTRSTIVITHYQRLLNYIVPDVV
                     HVLSRGRIVRTGGKDLALELEARGYAEYQEEAVA"
     gene            complement(4430..>5102)
                     /locus_tag="VNY79_03055"
     CDS             complement(4430..>5102)
                     /locus_tag="VNY79_03055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="SufD family Fe-S cluster assembly protein"
                     /protein_id="HWX71459.1"
                     /translation="LDDAEIKYSTIQNWYPGDASGRGGVYNFVTKRGDCRGQNAKISW
                     TQLETGSAITWKYPSCILRGDNSRGEFYSIAISNGHQQIDSGTKMLHLGRNTTSRIIS
                     KGIAAGNSNNTYRGLVTAHRRASGARNFTNCDSLLIGDQCGAHTVPYIEAKNSSTVFE
                     HEATTSKISEEMLFYCRQRGLSAEEAVALVVNGFVKDVLQQLPMEFAVEAQKLISISL
                     EGSVG"
BASE COUNT          826 a         1666 c         1669 g          941 t
ORIGIN      
        1 attcggacgt atctttgcga ttagtgtacg gcggcggctt cgccgctcgc cggctcgagc
       61 tgcaccgatt cgccgcagcc gcaggctgag gtctggttcg gattgttgaa aacgaactgc
      121 gccgacagct tgtcgacctt gtaatccatc tcggtgccga gcagaaacag caccgccttc
      181 ggatcgatga ggatgcgaac ccccttgtcc tcgaccactt cgtcgagcgg attgatcttg
      241 tccgcatatt ccatggtgta ggccatgccg gcgcagccgc cgtttttgac gccgacgcgg
      301 accgccgcga ttcggctctc cgctttcgcc atcaccgcct tgatgcgttc cgcggcggcg
      361 tcggtgagcc gcaccacctg aggtctcggc cggacagcgg ccattgtcac atcctcctcg
      421 cctcgacttc gcaagaggcg cacagtttcg atccagaata actcaaaaat acaaacaaat
      481 ctcaccaccg tttatgtaat ccgccgcgac gcggcgcgca actcaccggc cgagactcac
      541 cacatgttga gcactgcgcg cgcctcatcc gacatgcggc tcgcatccca tggcgggtcc
      601 cagacgatgc tgaccttggc ctcgcgcacg cccggcacgc tggcgacagc gttctcgacc
      661 atgatcggca gctctgccgc cgacgggcag ttcggcgtcg tcagcgtcat gtcgaccttg
      721 accacgcggt cgtcgtcgat atcgaccttg tagatcaggc cgagctcgta gatgtcggcc
      781 gggatctccg gatcgtagac ggtcttgagc gcgccgacga tctcgtcggt caggcgcgcc
      841 atctcgtccg ccgggatcgc ggaaggccgc tccgccgcct cggcgacggc agcgctggcc
      901 gcttgcgggt tggtttcgtc ggtcatgcga aaaagtcctg cgccttgaga agggcctgcg
      961 ccaggcgatc tacctcggcc ggagtattgt acatggcaaa cgaggcgcgg cagctcgcgg
     1021 tcaagccgaa tcgcgcgagc agcggcatga cgcaatgggt gccggcgcgc accgccacgc
     1081 cggagcggtc gatgatcgtc gccacgtcgt gcggatgcgc ccctttgatc tcgaaggaga
     1141 cgatcggccc cttgtccttg gtggtgccga agatgcgcag agagttgatc tcccgcagcc
     1201 ggtcgtgggc gtagcgcatc agcccctcct cgtggctgcg gatgcgcgcc ttgccaacgg
     1261 aggcgacata gtcgagcgcg gcgccgagcc cgatcgcctg cacgatcgaa ggcgtgccgg
     1321 cttcgaattt gtgcggcgga tcgccgtagg tgatgcggtc ctcgaacacc tcgcggatca
     1381 tctcgccgcc gccgttgaac ggcggcatgg cggcaagatg cgcgtatttg ccgtagagca
     1441 cgccgatgcc ggtcggccca taggtcttgt ggcctgtgaa ggcatagaag tcgcagtcga
     1501 tgtcgcgcac atcgacgtcg acgtgcaccg cggcctgcgc gccatcgatc agcaccggaa
     1561 cgccgtgcgc gtgcgcgatg cgggtgacct ccttcaccgg caccagcgtg ccgagcatgt
     1621 tcgacatatg cgtcacagcg accagcctgg tgcgtgggcc gatgagcttc tcgaactcgt
     1681 cgacgagaaa atggccttcg tcgtcgaccg gcgcccattt gatcaccgcg ccctggcgct
     1741 cgcgcagaaa atgccatggc actatgttgg agtggtgctc catgatcgag agcacgatct
     1801 cgtcgcccgc cttgatgcgc tcgcgcccga acgtgtaggc gacaagattg atggcctcgg
     1861 tagcgttgcg ggtgaagatg acctcttcct tacggccggc attgaggaag gccgcgactt
     1921 tctcgcgggc gccttcgtag gcttcggtcg cctcgttggc gagatagtgc aggccgcgat
     1981 gcacattggc atattgcgcg gtgtaggcgc gatcgagccg atcgagcacc gcccgcggct
     2041 tctgcgccga agcggcgttg tcgaggtaga ccagcggctt gccgtacacc tgcgtcgcca
     2101 ggatcggaaa atccgcgcgg atgcggttga cgtcgtaggt gccgttggtc agtgcgtcat
     2161 gcatggcgga atacccgtgc cttgagccac gccgcgacct gctccatcag cgcctcgcgc
     2221 aggccggcat gctcgatgcc ctcgaccgcc ccgccgagga aggcctggat cagcaaggcc
     2281 tcggcttccg ccgccgggat gccgcgcgcc atcaggtaga atttgagctc ctcgtcgagc
     2341 gcgcctgcgg tggcgccgtg gccgcactgc acgtcgtcag caaagatctc gagctccggc
     2401 ttgttgtcgg cctcggcgcg atcggagagc agaagcgcct gcgtcatcat cttggcgtcg
     2461 gtctgctgcg cgccctggcg cacgatgatg cggccctgaa acacgccgtg ggcctcgtcg
     2521 tcgagcaccg tcttgaacag ctcgcggctc tggcagccgc gcgcaatgtg agtggcgacg
     2581 agcgtcgtgt cggcgtgctg ccgcccgttg aggaggctcg cgccgcgaat gccggcgacg
     2641 gtctcctcgc cgtcgaacct gaggaacagc tggttgcgca ccacggcgcc gccaatggtg
     2701 aaggtaaagg cgttgaagcg ggctttcccg ccgatcgccg ccgcgagtgt cgagacgtgg
     2761 agcgcgtctg cgccctcgcc gatgagcttc acatgatcga cgtgggcctc atcgccgacg
     2821 aagagttcga gcgccgcgtt gacctggtac tcgctgccgg ccggcccctc gtggctctcg
     2881 atgagcatgg cgcgggcgcc ctgctcgacc acgaccagcg agcgcacgaa ggtcgcggcc
     2941 ggcttttccg aggcgacgaa gaggagatgc agcggccgct cggtcgtcga cccggcgccg
     3001 atgcggatga ccgcaccgtc gcccatgagc gccgtgttga gcgccacggc gacatcgctt
     3061 gccggcgcca gcgtgccgat cttttccaca accgccgcat cgttgtcggc gagcgcatcg
     3121 gcgagcgaac cgacggtcag gccgggctcc agtgccgcgg tgtcggacag ttccggcacg
     3181 aacgcgccgt cgacgaacac gagccggcgg cactcgacgt cgccgatcat ggcgccggcg
     3241 gatttggcgc gcgccttggc cgcagcatcc ggcgggctag caagcggctt tgcctcgcgc
     3301 atcagcgcgc gcaggtcggt gtacttccat tcctcgacgc ggcgatgcgg caggccctcg
     3361 cgggcgaaca catcgaaggc ggcggcgcgc tgcgcggcaa tggcgccgtc gccgggaagc
     3421 cgcgtgcgca cctgcgcata ggcgtgcgcc agcgcggtct ccgccgcggt cttgatcacc
     3481 ttcacgtcag ccatggcatt cattcgtctg cgatcgtggc ggccgctgcg ggctcacgcc
     3541 accgcctctt cctgatattc cgcatagccg cgcgcctcga gctccagcgc caaatccttg
     3601 ccgccggtcc gcacgatgcg cccgcgcgaa agcacgtgca ccacgtcggg cacgatgtag
     3661 ttgagcagcc gctggtaatg ggtgatgacg atcgtcgaac gggtcggcgc ccgcagccgg
     3721 ttgacgccgt cggagacgat cttgagcgca tcgatgtcga ggccggaatc ggtctcgtcg
     3781 agtaccgcga gccgcggctc gaacagcgcc atctggagga tctcgttgcg cttcttctcg
     3841 ccgccggaga agccgacatt gaccgggcgg cgcagcatct cctgattgat gccgagcttg
     3901 ccggcgacct cgcgcacctt cttgaggaat tccggcgtcg acagctcggc ctcgccgcgc
     3961 ttcttgcgct gcgcgttgag cgccgtgcgc agaaacgtca tagtagcgac gccggggatt
     4021 tccagcggat attgaaaggc gaggaacagt ccggcggcgg cgcgtgcgtc gggtcccatg
     4081 tcgaacaggt tcttgccgtc gaggagcacc tcgccggcgg tcggctcata gtcgggcttg
     4141 ccggcgagca cgtaggcgag cgtcgatttt cccgagccgt tcgggcccat gatcgcgtgc
     4201 acctcgcccg gctcgacgac gagatcgagg cccttgagga tttccttgcc gtcgatctcg
     4261 acgtgcaggt tcttgatttc cagtaatggc atttcgcagc tctacttctg tgaccggcat
     4321 ccttcgaggc tcggccttcg gcctcgcacc tcaggatgac gaatttattt tgcggcccgt
     4381 catcctgagg tgaccgcgaa agcggccctc gaaaggatgc ggcccggaac tagcctacgc
     4441 tgccctccag cgagatcgag atcagcttct gcgcctcgac cgcgaattcc atcggcagct
     4501 gctgcagcac gtccttgacg aagccgttga ccacgagcgc cacggcctcc tcggccgaga
     4561 gcccgcgctg ccggcaatag aacagcatct cctcggagat cttcgaggtg gtcgcctcgt
     4621 gctcgaacac ggtcgaggaa ttcttcgcct cgatgtaggg cactgtgtgc gcaccgcact
     4681 gatcgccgat gagaagcgag tcgcagttcg tgaaattacg agcgcccgag gcgcggcggt
     4741 gcgcggtcac gaggccacga taggtgttgt tcgaattgcc ggcggcgatg cccttggaga
     4801 tgatgcggct cgtcgtattc cggccgagat gcagcatctt ggtgccagaa tcgatctgct
     4861 ggtgcccgtt ggagatggcg atcgaataga attcgccgcg cgaattgtcg ccgcgcagga
     4921 tgcagctcgg atatttccag gtgatggccg agccagtctc aagctgggtc caggaaatct
     4981 tcgcgttctg gccgcggcaa tcgccgcgct tggtgacgaa attgtagacg ccgccgcggc
     5041 cggaggcgtc gcccggatac cagttctgga tggtcgaata ctttatctcg gcgtcatcga
     5101 gc
//
LOCUS       DATMQB010000095         2018 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_647276, whole genome shotgun sequence.
ACCESSION   DATMQB010000095 DATMQB010000000
VERSION     DATMQB010000095.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2018)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2018)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2018
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_647276"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..338
                     /locus_tag="VNY79_03060"
     CDS             <1..338
                     /locus_tag="VNY79_03060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647710.1"
                     /note="activates fatty acids by binding to coenzyme A;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HWX71460.1"
                     /translation="GFLYLTDRVKDMIISGGENIASSEVERVVYQLPQVREAAIIGVP
                     DETWGERPVAVVALNAGHSLDYETLAKHCRAHLAGFKVPKQLIVRDQLPRNPSGKVLK
                     RLLRDELQQ"
     gene            390..1058
                     /locus_tag="VNY79_03065"
     CDS             390..1058
                     /locus_tag="VNY79_03065"
                     /inference="COORDINATES: protein motif:HMM:TIGR02118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EthD domain-containing protein"
                     /protein_id="HWX71461.1"
                     /translation="MVKIAILMKRRTGLSVEDFQDHLRTRYGRLALCGPGLRRYVQSC
                     ALPQGYARGELLFDAVGEMWFDSLDDYEHSMRSPEFAPARDEESAFLDRARTVAMPVD
                     VHVIKDGAIPGNAVKNIEFVKRRPGMALDEFRTYWRNVHGPLAAKIPSICRYEQNHLA
                     LGEYQKGAAPPYDGLAVTWFASTAEMRSGAATAEYAATRADEAHFLPEGHLPIIITRE
                     HVVL"
     gene            1118..1795
                     /locus_tag="VNY79_03070"
     CDS             1118..1795
                     /locus_tag="VNY79_03070"
                     /inference="COORDINATES: protein motif:HMM:NF013488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HWX71462.1"
                     /translation="MDEAKTIVVYTDYKSPYAYLAKDLIYRLEDEFRVRLDWLPYTLD
                     IPSYLGSARLDERGEVVESERSPHQWRRVRYSYMDCRRQARKRGLVILGTRKIWDSST
                     AAIGMLWAKRQGTAAFRAYHDRVFERFWRRDLDIEDARVVAAALAETGADATGFNDFL
                     AGDGRREHDAIRAAAETAGVFGVPTLLVDGELFWGREHLPDIREMLAPLARSGADSLV
                     VGAAAGR"
     gene            complement(1811..>2018)
                     /locus_tag="VNY79_03075"
     CDS             complement(1811..>2018)
                     /locus_tag="VNY79_03075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="putrescine ABC transporter permease PotI"
                     /protein_id="HWX71463.1"
                     /translation="VIASFTTGPGATTLPIRIYSEVRLGVKPEMNAVCSIMVAVVGVA
                     VIAASLLAKLTGGAGASRRPNVDR"
BASE COUNT          349 a          665 c          682 g          322 t
ORIGIN      
        1 agggattttt gtatctcacc gaccgggtga aggacatgat catctccggc ggcgagaaca
       61 tcgcctcctc cgaggttgag cgcgtcgtct atcagctgcc gcaggtgcgc gaagcggcga
      121 tcatcggcgt gccggacgag acatggggcg agcggccggt cgccgtggtc gcgctcaacg
      181 ctggacacag cctcgactac gagacgctgg caaaacattg ccgcgcgcat cttgccggct
      241 ttaaggtgcc gaagcagctg atcgtgcgcg accagctgcc gcgcaatcct tcgggcaagg
      301 tattgaagcg gctgctccgg gatgagctgc agcagtaggc gatggcggcg gggcggccgc
      361 gggccgcgca accggccggg agagcgggca tggtgaagat tgcgatcctg atgaagcgcc
      421 gcaccggcct ctccgtcgag gacttccagg accatctgcg gacccgatac gggcggctgg
      481 cgctatgcgg tcccggcctg cgccgctatg tccaatcctg cgcgctgccg cagggctatg
      541 cccgaggcga actcctgttc gatgccgtcg gcgagatgtg gttcgattcg ctcgacgact
      601 acgagcattc catgcgctcg ccggaattcg ccccggcgcg cgacgaggag agcgcgttcc
      661 ttgaccgcgc gcggacggtg gcgatgccgg tcgacgtcca cgtgatcaag gacggcgcca
      721 ttcccggcaa cgcggtaaag aacatcgagt tcgtcaagcg ccgcccgggc atggcgctcg
      781 atgagttccg cacctattgg cgcaacgtcc acgggccgct cgccgcgaaa atcccctcga
      841 tctgccgcta cgagcagaat catctggcgc tcggcgaata tcaaaaaggg gcagcgccgc
      901 cctatgacgg gttggcggtc acgtggttcg cctcgaccgc cgagatgagg agcggcgcgg
      961 cgacggcgga atatgccgcg acccgcgccg acgaagccca tttcctgccc gaggggcatc
     1021 tgccgatcat catcacccgc gagcacgtgg ttctctgatg gccggaacag acaagcgaag
     1081 cgccggcgat gcgccaagcc gaagcgtcgg tgccgtcatg gatgaggcaa agacgatcgt
     1141 cgtctacacc gactacaaga gcccctatgc gtatctcgcc aaggatttga tctatcgcct
     1201 cgaagacgaa tttcgggtcc ggctcgactg gctcccctac accctcgaca tccccagcta
     1261 cctcggcagc gcgcgcctcg atgagcgggg cgaagtcgtc gagtccgaac gcagcccgca
     1321 tcagtggcgg cgggtgcgct actcctacat ggactgccgg cggcaggcgc gcaaacgcgg
     1381 cctcgtcatc ctcggcacgc gcaagatctg ggactcctcg accgccgcca tcggcatgct
     1441 ctgggcgaaa cggcagggca cagccgcctt ccgcgcctac cacgaccggg tgttcgagcg
     1501 cttctggcgg cgcgacctcg atatcgagga cgcgagagtg gtcgcggcgg cgctggccga
     1561 gaccggcgcg gacgcgacgg gtttcaacga ctttctcgcg ggcgatggcc ggcgcgaaca
     1621 cgacgcgatc cgcgcggcgg cggaaacggc cggcgtcttc ggcgtgccga ccctcctcgt
     1681 cgacggcgaa ctcttttggg gacgcgagca cctgcctgac atccgcgaga tgctggcgcc
     1741 gcttgcgcgc tccggcgcag acagtttggt cgtcggtgcg gcggctggac gctgatcggg
     1801 aatggaccat tcaacggtcc acgttcggcc gccttgatgc accggcgccg ccggtgagct
     1861 tggcgagcag cgaagcagcg atgaccgcga cgccgaccac ggcgaccatg atgctgcaca
     1921 ccgcgttcat ctccggtttt accccgaggc ggacctcgga atagatgcgg atcggcagcg
     1981 tggtcgcgcc cggtccggtg gtgaagctcg cgatgacc
//
LOCUS       DATMQB010000096         2145 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3127752, whole genome shotgun sequence.
ACCESSION   DATMQB010000096 DATMQB010000000
VERSION     DATMQB010000096.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3127752"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..781
                     /locus_tag="VNY79_03080"
     CDS             <1..781
                     /locus_tag="VNY79_03080"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71464.1"
                     /translation="ASRTAPEDFGGTMLRLLAYMAGLAVLGGLAAIFFRLPAVVAAVG
                     PAPRLQWIEVERPRPAFELSLPELGGPASRYAIFRRDADGARKDVLSWGEPAGSGPYV
                     MLEVYRPRVPGDRFIDPLSEVAARLIAFTVTDDVKPAGVIDGKFGAVPLVDFAIAPDG
                     RERRCLGFARAFDDPSMQLAGWYCSAGNEVVDRAVLACALDRFTILSAAGDSKVADVF
                     ARAELKRSFCGRRNPILAATPEGRTRSAEPRSVKLRGHRLQ"
     gene            988..1362
                     /locus_tag="VNY79_03085"
     CDS             988..1362
                     /locus_tag="VNY79_03085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71465.1"
                     /translation="MRAIVVRFVAALVVAAFAGAAEAATRKQQPEVMRSASGTVIQPT
                     RTIIHHLDGRTTIIVVPRRSYLDVGNNVPVGYGSHMDYAFPPDGDPGRPYWFYGPDVR
                     GTGSFPIPPAFYIPGWNPNNPF"
     gene            complement(1365..>2145)
                     /gene="leuB"
                     /locus_tag="VNY79_03090"
     CDS             complement(1365..>2145)
                     /gene="leuB"
                     /locus_tag="VNY79_03090"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003862 - 3-isopropylmalate dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HWX71466.1"
                     /translation="PALADASSLKREVVEGLDIIILRELTGGVYFGEPKTITDLGNGQ
                     KRAVDTQVYDTYEIERIARVGFELARERRNKVTSMEKRNVMKTGVLWREVVEDVHARE
                     YKDVGLEHMLADAGGMQLVRWPKQFDVIVTDNLFGDMLSDIAAMLTGSLGMLPSASLG
                     EVDAKTKRRKALYEPVHGSAPDIAGKGVANPIAMLASFGMALRYSFNMGKEADLLDAA
                     IAAALARGLRTADLKSDGTTVVGTAEMGEAIVGEMERLAAA"
BASE COUNT          325 a          767 c          695 g          358 t
ORIGIN      
        1 ggcctcgcgg accgcgccgg aggatttcgg cggcaccatg ctgcgcctgc tcgcctatat
       61 ggccgggctc gccgtgctcg gcggccttgc cgcgattttc ttccgcttgc ccgccgtcgt
      121 cgctgcggtc gggcccgcgc cgcggctgca atggatcgag gtcgagcgcc cgcgtccggc
      181 gttcgagctc agcctgcctg agctcggcgg gccggcctcg cgctacgcca tcttccgccg
      241 cgacgccgat ggcgcgcgca aggacgtgct gagctggggg gagcccgcgg gcagcggacc
      301 ctatgtcatg ctcgaggtct accgtccacg cgtcccgggc gaccggttca tcgacccgtt
      361 gagcgaggtc gccgcgcgcc tcatcgcctt caccgtcacc gacgacgtca agcccgccgg
      421 cgtgatcgac ggcaagttcg gcgcggtgcc actggtcgat ttcgccattg cgccagacgg
      481 ccgcgaacgc cgctgcctcg gcttcgcccg cgcctttgac gatccttcga tgcagcttgc
      541 cgggtggtat tgcagcgccg gaaacgaggt cgtcgaccgc gccgtgctcg cctgcgcgct
      601 cgaccggttc accattctct ccgccgcagg cgattccaag gtggccgacg tgttcgcgcg
      661 cgccgagctc aagcgcagct tctgcggccg gcgcaatccg atcctggcgg cgacgcccga
      721 gggccgaaca cgcagcgccg aaccgcgatc tgtgaagctg cgcggacacc ggctgcagta
      781 ggtacgccgt ttcgcgccca gtcgccgcgc tgcttgtcga gcaaaatcat gcggataacc
      841 gatgccgcga atgccttcgg gtcgccaagg ggcgcgccaa gcgcacagag caccgacttc
      901 gccaccaaaa acgcggacca ccgccggaaa ggctgttccc gacggcgcaa gccggttaca
      961 ttgtcagcac agaacaagcg aggcgccatg cgtgcaatcg tcgttaggtt tgtagcagcc
     1021 cttgtcgttg cggctttcgc cggcgccgcc gaggccgcaa ccaggaagca gcagcccgag
     1081 gtgatgcgct cggcgagcgg gacggtgatc cagccgacgc gcacgatcat ccatcacctc
     1141 gacggccgca ccacgatcat cgtcgtccct cgccgctcct acctcgatgt cggcaacaac
     1201 gtgcccgtcg gctacgggag ccacatggac tacgcgtttc cgcccgacgg cgatccgggc
     1261 cgcccctact ggttctacgg gcccgacgtg cgcggcaccg gcagcttccc gatcccgccc
     1321 gcgttctaca ttccgggctg gaatcccaac aacccgttct gacgtcaggc ggccgccagc
     1381 cgctccatct cgccgacgat cgcctcgccc atctcggcgg tgccgaccac cgtggtgcca
     1441 tcggatttga ggtcggcagt gcgcaggccg cgcgccagcg cggcggcgat cgccgcatcg
     1501 agcagatcgg cctccttgcc catattgaag gagtagcgca gcgccatgcc gaaggaggcg
     1561 agcatggcga tcggattggc gacgcccttg ccggcgatat cgggggccga accgtgcacc
     1621 ggctcgtaca acgctttgcg ccgcttcgtc ttggcatcga cttcgccgag cgaggccgag
     1681 ggcagcatgc cgagcgagcc ggtcagcatc gcggcgatgt cggagagcat gtcgccgaac
     1741 agattgtcgg tgacgatgac gtcgaactgc ttcggccagc gcacaagctg catgccgccg
     1801 gcatcagcga gcatgtgctc gagcccgacg tccttgtatt cgcgcgcatg cacgtcctcg
     1861 acgacctcgc gccagagcac cccggtcttc atcacgttgc gcttctccat cgacgtgact
     1921 ttgttgcgcc gctcgcgggc aagctcgaag ccgacccgcg cgatgcgctc gatctcgtag
     1981 gtgtcgtaga cctgcgtgtc gacagcgcgc ttctgcccgt tgccgaggtc ggtgatggtc
     2041 ttcggctcgc cgaaatagac gccgccggtc agttcgcgca ggatgatgat gtcgagcccc
     2101 tccaccacct cgcgcttgag gctcgaggcg tcggcgagcg ccgga
//
LOCUS       DATMQB010000097         5295 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3444884, whole genome shotgun sequence.
ACCESSION   DATMQB010000097 DATMQB010000000
VERSION     DATMQB010000097.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5295
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3444884"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(5..196)
                     /locus_tag="VNY79_03095"
     CDS             complement(5..196)
                     /locus_tag="VNY79_03095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71467.1"
                     /translation="MNHSMYSADGRTHLKIVVIGLLCATLVAAVGIFAQVRDVDLGTA
                     PLVKAGQPTAMTGRLPSIR"
     gene            complement(395..517)
                     /locus_tag="VNY79_03100"
     CDS             complement(395..517)
                     /locus_tag="VNY79_03100"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71468.1"
                     /translation="MTGTTVAQDGAASAALSRLADLGTMLRRSGRMAAIRFPEQ"
     gene            777..1748
                     /gene="dmeF"
                     /locus_tag="VNY79_03105"
     CDS             777..1748
                     /gene="dmeF"
                     /locus_tag="VNY79_03105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007565336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008324 - monoatomic cation transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDF family Co(II)/Ni(II) efflux transporter
                     DmeF"
                     /protein_id="HWX71469.1"
                     /translation="MHSRSITPWTHGHAFLGERHDEHERRTWGVVALTAAMMVVEIVG
                     GSLFGSIALVADGWHMATHVAALAIAGFAYLFARRHARDARFSLGTGKFGELAAFTSA
                     IILGLIALGIGYESVLRLFHPVVIHFEEAVPIAVLGLCVNLASAWLLRAPQDQEHVHS
                     GADHHHLHEARHGAHHHDTNFRAAYVHVLADAVTSVGAIAGLSVAWAFGWSFMDPVVG
                     LLGMIVMASWAVSLIRSAGRVLLDAVPDPELAQTIRQRMEIGGDRLTDLHVWQLGPGH
                     AAVMASVVSDSPQAPAAYKRRLEGLAGLSHVTVEVNACGNAQMGNHE"
     gene            1752..2468
                     /locus_tag="VNY79_03110"
     CDS             1752..2468
                     /locus_tag="VNY79_03110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M15 family metallopeptidase"
                     /protein_id="HWX71470.1"
                     /translation="MGNRGQEGREENPSRFAVLLLAGMLAICTPPAAVAQTPPAAFID
                     AATVVPALIVDMRYAGAHNFVGRPIPGYDAARCWLTQPAGAALGEVARDFAPRGLVLK
                     VFDCYRPARAVASFMRWARDLNDTAGKAEFYPQIDKRTLFRDGYIAARSGHSRGSTVD
                     ITLAEAGGRELDMGTPFDFFSPRSSPADPSVAGSARANRALLAAAMRRRGFRPYAKEW
                     WHFTLAREPFPATYFDFPVR"
     gene            complement(2537..3268)
                     /locus_tag="VNY79_03115"
     CDS             complement(2537..3268)
                     /locus_tag="VNY79_03115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016558545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX71471.1"
                     /translation="MASSLAIAGVHAAYGAVRVINGVSLGIGAGETVVLLGTNGNGKS
                     TLMKCIMGIVRPSAGSIIADIDGVHHDLIGRTTEEIVDLGIALVPEGRRLFPRLTVEE
                     NLLLGAFRRAARRELARNLQMCFETFPRLAERRGVLAGSLSGGEQQMLALGRALMLAP
                     KILLVDEPSVGLAPILVARTIDAIAEMKARYRLTVLMAEQNFTQAVRIADRGYVIVHG
                     RIAFEGGSAQALNNNDLIKKFYLGL"
     gene            complement(3258..3989)
                     /locus_tag="VNY79_03120"
     CDS             complement(3258..3989)
                     /locus_tag="VNY79_03120"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX71472.1"
                     /translation="MSQLLEIERLGKRFGGFVALEDISFSVAAGERVGLIGPNGSGKS
                     TLVNCICGTLRNEAGSVRFDGHRLDGSTAHQRTHRGLARTFQLPRPFASLCLLDNMRI
                     PLLYTVAARGGGRSAPDIEARCFEVLREVGLEDKARRLPRELTQVEMRKLELARAMAA
                     EPKLLIADESMAGLTHSEVEDIVALLKRLNEHGVTIILIEHIMRAVMSFSQRLIVLVS
                     GRKIADGLPDQVVRDPDVERAYLGQ"
     gene            complement(3986..4981)
                     /locus_tag="VNY79_03125"
     CDS             complement(3986..4981)
                     /locus_tag="VNY79_03125"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX71473.1"
                     /translation="MRSDFFLLICIAACAALYGAAAALGNDYVFFAGYVVLQYVVLST
                     AWNILGGYCGYVNFGSAAFFALGAYSTVAMHKLHPLPIPLLVLVGGVVSGVVGLGMGY
                     LTLRLRGAFFAIATLALAVVLQTLVVNWDYVGGSRGAYIVRPETLAPFGPYIRYLFTV
                     MLLLAAGAVTVARLIERSRPGFGFATIRDDELAAEASGVPTLRLKLVATMISGALMGM
                     AGAPFPYYIGFLQPSSAFGLDYAVNSIAMPLIGGTTSWVGPLIGAVLLGSLQQIATVT
                     ISSAVNLLIVGCLLVAFVIIAPNGIVGLVRHYIQHKPEDFVGRRKVEADAPEHAP"
     gene            complement(4984..>5295)
                     /locus_tag="VNY79_03130"
     CDS             complement(4984..>5295)
                     /locus_tag="VNY79_03130"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX71474.1"
                     /translation="VDPIRIKRIAFGISIATASLAGAFLIIIQPVEPSVGREYIGRVF
                     AICVLGGMGSLPGTVIAAMLVGIVESLTATFYGPSWAPAVSFGFLLLTLAVRPAGLLG
                     R"
BASE COUNT          925 a         1685 c         1814 g          871 t
ORIGIN      
        1 gaaatcagcg gatggaaggc agacgcccgg tcatggctgt gggttgcccg gccttgacga
       61 gcggcgcagt gccgagatcg acatcgcgga cctgggcgaa tatgccgact gccgcgacca
      121 atgtcgcgca cagaaggccg atgaccacga tcttcaaatg agtgcgccca tcggcgctat
      181 acatcgaatg attcatggcg tccctccggt cattccgggc caaggagaat ggtcggctcc
      241 cacagccaaa ggagaattgt ctagctcccg tagctaagtg cgagctgttg ccctgaaaac
      301 gcggcttcac tgaaccttga acaaccgtga taacgggtga ggggcttctt tgttccgccg
      361 cggctcagca cggcgcgctg gaacaagcca caagtcattg ttcgggaaaa cgaattgcgg
      421 ccatccggcc gctgcgccgg agcatggtgc cgaggtcggc gaggcgcgag agcgccgcgg
      481 acgccgcgcc gtcctgcgcc acggtggtac cggtcatgcc ggttgatcgt cctggtcggc
      541 ggtcgcgtgt ttcaaagctc tgtgcggcgg ctgacggacc gccggcacgc aaccgaggag
      601 ccgcgctcgc gtccaaggct gtccccgaag gcgctgggat atgaatacct ccccggcaaa
      661 atctgccggg tatagggcta ccgcggcgtt aacgcggggc cggccacctg cagatttgcg
      721 aagagtgcgg gtaatctcca gcttcgtggg gagttaaaag tgaatcgagg tgcaacatgc
      781 attcgcgctc cataaccccc tggacgcacg gtcacgcctt tctcggcgag cgtcacgacg
      841 agcatgagcg gcgcacctgg ggcgttgtag ccttgaccgc ggccatgatg gtcgtcgaaa
      901 ttgtcggcgg ctcgctgttc ggctcgattg cccttgtcgc cgacggttgg cacatggcga
      961 cccacgtcgc cgcgctggcg atcgccggct tcgcctattt gttcgcccgc cggcatgccc
     1021 gcgatgcgcg cttttcgctc ggcaccggca agttcgggga actggcggca tttaccagcg
     1081 ccatcatcct ggggctgatc gcgctcggga tcggctatga gtcggtcctg cggctcttcc
     1141 acccagttgt catccatttc gaggaggcgg tgccgatcgc ggtgctggga ctgtgcgtca
     1201 atctcgccag cgcttggctc ttgcgcgcgc cgcaagacca ggagcacgtc cactccggcg
     1261 cggaccacca tcacctgcat gaggcacgcc acggagcaca tcatcacgac accaattttc
     1321 gcgccgccta cgtgcacgtc cttgccgatg ccgtgacctc agtgggggcg atcgcggggt
     1381 tgtcggtggc ctgggcgttc ggatggagtt tcatggatcc ggtggtggga cttctgggca
     1441 tgatcgtgat ggcgtcatgg gcggtaagcc tcatccgctc cgccggccgc gtgctgctgg
     1501 acgccgttcc cgacccggag cttgcgcaga ccattcggca gcgaatggag atcggcggcg
     1561 accggctaac cgacctgcat gtgtggcaac tcgggcccgg ccacgccgca gtgatggcgt
     1621 cggtcgtgtc cgattccccg caagcgccgg cggcctacaa gcggcgcctt gaaggtttgg
     1681 ctgggttgtc gcatgtgacg gtcgaggtga atgcgtgcgg taatgcgcaa atggggaatc
     1741 acgagtagcg aatggggaat aggggccagg agggacgcga agagaacccc tctcgattcg
     1801 ccgttttgct gctcgctggg atgcttgcga tctgcactcc gcccgcagcc gtcgcgcaaa
     1861 cgccgcccgc cgctttcatc gatgcggcga ctgtggtgcc ggctctcatc gtcgacatgc
     1921 gctacgccgg cgcccacaat ttcgtcggcc ggccgatccc cggctacgat gcggcgcgtt
     1981 gttggctcac gcaaccggct ggtgccgcgc tcggcgaggt agcgcgcgac tttgcgccgc
     2041 gtggcctcgt gctcaaggtc ttcgactgct atcgcccggc gcgcgcggtg gcgagcttca
     2101 tgcgctgggc gcgcgacctc aacgacaccg ccggcaaagc ggaattctat cctcagatcg
     2161 acaagcgcac gctgttccgc gacggctata tcgccgcgcg ctcaggccat tcgcgcggct
     2221 cgaccgtcga tatcacgctc gcagaggccg gcggccgcga actcgacatg ggaacgccgt
     2281 tcgatttctt cagcccgcgg tcttcgcctg ccgatccgag cgtcgccggt tccgcccgcg
     2341 ccaatcgtgc cttgctcgcc gctgcgatgc ggcgccgcgg cttccggcct tacgcgaagg
     2401 agtggtggca tttcacgctg gcgcgagaac catttcccgc aacttatttc gattttccgg
     2461 tgcggtgatg ccggggtcgt gggcgcggcg tgcgccgcgg ccgccgctgc ggcgcgggga
     2521 gggcgcgacc gcgcgttcac agccccagat aaaacttctt gatcagatcg ttgttgttga
     2581 gcgcctgcgc cgagccgcct tcgaaggcga tcctgccgtg cacgatcaca tagccgcggt
     2641 cggcgatacg gacagcctgc gtgaaattct gttcggccat cagcacggtg aggcggtagc
     2701 gcgccttcat ctcggcgatc gcgtcgatgg tgcgggcgac gagaatcggc gcgagcccga
     2761 ccgagggttc gtcgaccagc agaatcttcg gcgccagcat gagcgcgcgg ccgagcgcaa
     2821 gcatctgctg ctccccgccg ctcaagctgc cggcgagcac gccacggcgc tcggcgaggc
     2881 ggggaaaggt ctcgaagcac atttgcagat tgcgcgcgag ctctcgccgc gcggcgcggc
     2941 ggaaggcgcc gagcagaagg ttctcctcga cggtgagcct cggaaacagg cgtcgcccct
     3001 ccgggaccag cgcaatgccg aggtcgacga tctcctcggt ggtgcggccg atcagatcgt
     3061 gatggacgcc gtcgatgtcg gcgatgatcg aaccggcgct cggccgcacg atgcccatga
     3121 tgcacttcat gagcgtcgac ttgccgttgc cgttggtgcc gaggagcacg acggtctcgc
     3181 ccgcgccgat gccgagcgaa acgccgttga tcacgcgtac cgcaccgtag gcggcgtgaa
     3241 cgccggcgat ggcgaggcta ctggccaaga taggcccttt ccacgtccgg gtcgcgcacg
     3301 acctggtccg gcaggccgtc ggcgatcttg cgcccggaga cgagcacgat gagccgctgc
     3361 gagaagctca tcaccgcgcg catgatgtgc tcgatgagaa tgatggtgac gccgtgttcg
     3421 ttcaggcgtt tgagcagcgc cacgatgtcc tcgacctccg aatgggtgag cccggccatc
     3481 gattcgtcgg cgatcagaag cttgggttcc gctgccatgg cgcgggcgag ttcgagcttg
     3541 cgcatctcca cctgggtcag ctcgcgcggc aggcgccgtg ccttgtcttc gagaccgacc
     3601 tcgcgcaaca cctcgaagca tcgcgcctcg atgtccggcg cggagcggcc gccgccgcgc
     3661 gccgcgacgg tgtagaggag gggaatgcgc atgttgtcga ggaggcagag gctcgcgaac
     3721 ggccgcggca actgaaaggt acgggcaagg ccgcggtgcg tgcgctggtg cgcggtcgag
     3781 ccgtcgagcc ggtggccgtc gaagcgcacc gaaccggcct cgttgcgcag cgtgccgcag
     3841 atgcagttga ccagcgtact cttgccggag ccgttcggtc cgatcaggcc gacgcgttcg
     3901 ccggcggcta ctgagaacga gatgtcttcc agcgcgacga agccgccaaa acgtttgccg
     3961 aggcgttcga tctcgagcag ctggctcatg gcgcgtgttc cggtgcgtcg gcttcgacct
     4021 tccggcggcc gacgaaatcc tccggcttgt gctggatgta gtggcgcacc agcccgacga
     4081 tgccgttggg cgcgatgatg acgaaggcga cgaggaggca gccgacgatc agcaggttga
     4141 cggcggacga gattgtcacc gtcgcgatct gctgcagcga accaagcagg acggcgccga
     4201 tcagcggacc gacccagctg gtcgtgccgc cgatcagcgg catcgcgatc gagttgaccg
     4261 cgtagtcgag gccgaacgcc gaggacggct gcaggaagcc gatgtaatac gggaacggcg
     4321 cgccggccat gcccatgagc gcgcccgaga tcatggtggc aacgagcttg agccgaagcg
     4381 tcgggacccc ggaggcttct gcggcgagtt cgtcgtcgcg gatggtggcg aagccgaagc
     4441 cggggcgcga gcgctcgatc agccgcgcga ccgtcaccgc gccggcggca agcagcagca
     4501 tgaccgtgaa cagatatctg atataggggc cgaacggagc gagcgtttct ggccgtacga
     4561 tataggcgcc gcgcgagccg ccgacatagt cccagttgac gaccagcgtc tgcagcacga
     4621 cggcgagcgc aagcgtggcg atggcgaaga atgcgccgcg cagccgcagc gtcagataac
     4681 ccattccgag accgacgacg cccgacacca cgccgccgac caggaccagg agcgggatcg
     4741 gcagcggatg aagcttgtgc atggcgacgg tcgaataagc gccgagggcg aagaaggcgg
     4801 cggagccgaa attcacgtag ccgcaatagc cgccgagaat attccatgcc gtcgagagca
     4861 cgacatattg cagcaccacg tagccggcaa agaacacgta gtcattgccg agcgcggcgg
     4921 cggcgccgta gagcgcggca caggcggcga tacagatgag caagaagaag tccgagcgca
     4981 cggctagcgc cccaacaggc cggccggccg caccgccaag gtgagcagta agaagccgaa
     5041 ggacaccgcc ggcgcccacg aggggccgta gaacgtcgcg gtcaggctct cgacgatgcc
     5101 gaccagcatg gcagcgatca cggttcccgg caggctgccc atcccgccga gcacgcagat
     5161 cgcgaacacg cggccgatat attcgcgtcc gaccgacggc tcgaccggct ggatgatgat
     5221 gaggaacgcg ccggccagcg atgcggtcgc gatcgaaatg ccgaaggcga tgcgtttgat
     5281 gcggatcggg tcgac
//
LOCUS       DATMQB010000098         2027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3748888, whole genome shotgun sequence.
ACCESSION   DATMQB010000098 DATMQB010000000
VERSION     DATMQB010000098.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3748888"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            162..293
                     /locus_tag="VNY79_03135"
     CDS             162..293
                     /locus_tag="VNY79_03135"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71475.1"
                     /translation="MLDGFNEGWIEFSDYGRSAVKDTTTLDSVIAELVEASRAKAAA"
     gene            397..1212
                     /locus_tag="VNY79_03140"
                     /pseudo
     CDS             397..1212
                     /locus_tag="VNY79_03140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972049.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
     gene            complement(1211..1357)
                     /locus_tag="VNY79_03145"
                     /pseudo
     CDS             complement(1211..1357)
                     /locus_tag="VNY79_03145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020487022.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
     gene            1492..>2027
                     /locus_tag="VNY79_03150"
     CDS             1492..>2027
                     /locus_tag="VNY79_03150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017961779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HWX71476.1"
                     /translation="MTTPTNRVAIVTGASGGIGAAVAERLAKDGFTVVVNYAGNSASA
                     AAVVARIQRAGGRAVAAQADISDVAAAARMFDSAETAFGGVDVLINNAGIMNLAPIAD
                     SSDALFDRHIAVNLKGTFNTLREAARRLRDGGRIVNFSSSVTSLLQPTYGVYAATKAA
                     VEAMTSILAKELRGRNITV"
BASE COUNT          375 a          663 c          639 g          350 t
ORIGIN      
        1 gagcgacggt cccttcgggc tgcattatag atctcgttcc tcaacactct attggtgcag
       61 gatgacatac gttctcaaga taaatgggaa gtcgcataac gtggacgtgg acggcgatct
      121 tccgttctca gggcacgcaa aatccgttgc ctcggattcg gatgcttgac ggcttcaacg
      181 agggctggat cgagttcagc gactacggcc ggtcggcggt caaagatacg acgacgctcg
      241 acagcgtcat cgccgaactc gtcgaggcga gccgggccaa ggcagccgcc taacacgatc
      301 acgacttgcc gcatggactt ccgaaccagc cggcggcgcg aaacggcggc gggtgcgtgt
      361 gccctgccgc cgccacatcc tcgaaaggac accatcatgg aatcaatcac cacacagggc
      421 gttgcgatcc cgcgcctcgg cttcggcacg ttccgcatgc caggaggcga cgctcagccg
      481 gtcgtcgaga gtgcgattgc gctcggctac cggcatatcg acaccgcggc gatgtacgag
      541 aacgaggccg ccgtcggcgc cgccatcacg gcgtccggcg tgaaccggaa cgaactcttc
      601 gtcacgacga aggtctggca cgaccagctt gcgccggatg cgctctgccg ggcctttgac
      661 gccagcctgg gcaagctgcg gctcgaccat gtcgattttt acatgatcca ctggccgtcg
      721 atagacatgg acatggcggc gacgctggag gcgctgatgt cgctgcgaga gcgcggcctc
      781 acgcgtgcga taggcgtgtg caacttcaac ctgccgatga tccgccgcgc cgtggaggag
      841 atcggcgcgc cgatcgcacg cgtacaggtc gaataccacc cattcctgtc gcaggaccgg
      901 ttgctgtcct acctgcgggg caacggcatc cccttgacgg cctacgcacc gctcgcccag
      961 ggccgggccg cgagcgacgc aacgctcgct gccctcggac gcaagcatgg ctgcagcgcc
     1021 gcgcaggcgg ccatcgcctg gcttctggat caggagggca tcatcgtgat cccgaaagcc
     1081 gcgcgccccg aaagccagaa gtccaatatc ggcgcgctcg gcatccggct cgacgatgag
     1141 gatcgcgcgg tgatcgctgc tctctcgaag gaccagcgct tcgtccggcc acccttcgca
     1201 ccggaatggg atgccgtgtc gtgcgctcca atagccgtac ccccaaccgc gactccagtc
     1261 ccttcacggc atcggtcatg gaggatcgcg gcaggccaag atcgtcggcg gcctggatga
     1321 aactgcgccg ttccaccatg cgggcgaaga cgcgcatggc gtcgaagcgg tccgttgttc
     1381 gatctctcga attatgatgt cggattatgc gtaattatcc gccgcttggg aaggcgcgtc
     1441 ttgcttgtgt caagcgccga ttgtcggcgc ccaacccaaa ggagaaagat catgaccacc
     1501 ccaaccaatc gcgttgccat cgtcaccggt gcttcgggcg gcatcggcgc cgcggttgcc
     1561 gagcgtctgg cgaaggacgg cttcaccgtg gtggtgaatt atgccggcaa cagtgcttca
     1621 gctgcggcgg tggttgccag gatccagagg gccggcggcc gggctgtggc ggcccaggcc
     1681 gacatctcgg atgtcgccgc cgcggcacgc atgttcgact cggctgaaac cgcgttcggc
     1741 ggcgtcgacg tgctgatcaa caacgcaggc ataatgaacc tggcgcccat cgccgacagc
     1801 agcgatgcgc tgttcgatcg ccacatcgcg gtcaatctga agggcacctt caataccctg
     1861 cgcgaagcgg cccgccgcct gcgtgacggc ggccggatcg tcaacttttc ctcgagcgtc
     1921 accagcttgc tgcagccgac ttacggcgtc tatgccgcca ccaaggcggc ggtcgaggcc
     1981 atgaccagca ttctcgccaa ggagctgcgc ggcaggaaca tcaccgt
//
LOCUS       DATMQB010000099         5092 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3128666, whole genome shotgun sequence.
ACCESSION   DATMQB010000099 DATMQB010000000
VERSION     DATMQB010000099.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5092)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5092)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5092
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3128666"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..796)
                     /gene="egtD"
                     /locus_tag="VNY79_03155"
     CDS             complement(<1..796)
                     /gene="egtD"
                     /locus_tag="VNY79_03155"
                     /EC_number="2.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030745 - dimethylhistidine
                     N-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HWX71477.1"
                     /translation="MTRGLQTALRPATSTEATEGFAADVVAGLAAKPKRLPAKYFYDS
                     AGSALFEQITRLPEYYPTRCELALLQQYAPAMASFFPSGCALIEFGSGSSRKARILLR
                     PAASVEAYVPVDISGDFLREDAARLRRDFPHLSIIPVVADFTAMSGLPAEIAPMARAG
                     FFPGSTIGNFEPHEACAFLRRAAGILGPGSVLIVGIDLEKAPDILYRAYNDAEGVTAQ
                     FNLNLLVRINRELGGNFDLGAFEHHAFYNAERHRIEMHLASTRRQRV"
     gene            complement(805..2076)
                     /gene="egtB"
                     /locus_tag="VNY79_03160"
     CDS             complement(805..2076)
                     /gene="egtB"
                     /locus_tag="VNY79_03160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ergothioneine biosynthesis protein EgtB"
                     /protein_id="HWX71478.1"
                     /translation="MSRSAAFPAVRLLDPADEDAAVARGGARTRRYWLDAFRAVRAET
                     ERRAAPLGAEDQVVQSMPDASPIKWHRAHVTWFFEHFLLRPFVPGYRVFDERFAFLFN
                     SYYVAAGPRQERPQRGLVTRPGVVETTAYRAHVDAAVAALIETTDDLEAVASIVEIGL
                     HHEQQHQELMLTDILHAFAQNETHPAYDADWQWPRSERAAATAAPVNALVADIHLIGH
                     DGAGFSFDNECPAHQVLLQPVGVARTLITNGTWLEFMADGGYATPSLWLSDGWAACEA
                     EGWNAPGYWRKIDGAWFSMTLAGLRPVDPALPACHISYYEADAFARWCGKDLPSEAEW
                     EVAAASGALDDAFGVVWQWTRSAYSPYPGYRAAAGALGEYNGKFMVNQMVLRGSSLAT
                     PAGHSRKTYRNFFYPSARWQFSGLRLAEFER"
     gene            2399..3610
                     /locus_tag="VNY79_03165"
     CDS             2399..3610
                     /locus_tag="VNY79_03165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HWX71479.1"
                     /translation="MHGRGLTGGALLLLSTLATNNAFAAPSCRTAGSYESWLAGFERE
                     AAAQGISQRAIAAAVPSLTYDQRIINIDRGQRVFTQTFLQFSDRMAAAYRIQRGQALI
                     KTNAAVFARIEQQYGVPAAVIVAFWALESDFGANMGNYRSLSAIASLAYDCRRSDKFR
                     AQLLDALRLIDRGDLTPDDMIGSWAGELGQTQMMPSEYFRYAIDFDGDGRRDLVHSVP
                     DMLASTGNYLAGLDWRRGEPWLTEVRLPANLPWDQADLTIELPRAKWAAYGVTFADGR
                     PLPADNLSASLLLPMGRFGPAFLAYKNFQVYLQWNNSLVYSTTAAYLATRIDGAPALH
                     RGTQPPALSFNDVKAMQGLLARAGYDVGAIDGFLGLKTRQAVKAMQIKYALPADSYPT
                     AELLARMRAPR"
     gene            complement(3797..4186)
                     /locus_tag="VNY79_03170"
     CDS             complement(3797..4186)
                     /locus_tag="VNY79_03170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71480.1"
                     /translation="MGECNQRQQRRKHGEYAETERQSPYRRGSRDAATAMATPRFRLH
                     VSPTQATQHANVTDRKFVQQMTLFNKRRYNVAARKSSRIRPCAASQRALELIERKFGL
                     FSIFVCGAGARAARPSTMAALPAGSTH"
     gene            4370..>5092
                     /gene="exbB"
                     /locus_tag="VNY79_03175"
     CDS             4370..>5092
                     /gene="exbB"
                     /locus_tag="VNY79_03175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013528968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0015291 - secondary active transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tonB-system energizer ExbB"
                     /protein_id="HWX71481.1"
                     /translation="MPAPPADAAPAATPPAPPSPPVNTAAPGADSGPANAPAPSTNAP
                     SVNAAPSPPGETSISTAELPQDLSPWGMFVHADIIVKLVMIGLAIASLVTWTVWLAKW
                     LELRSARTAVRRDLRTLENCPTLSQAHEQLRNGTSPTAFLMQAAGNEIRLSASLRGDG
                     LKERIAWQLERIEQAASRKMARGTGVLATIGSTAPFVGLFGTVWGIMDSFIGISKAHT
                     TNLAVVAPGIAEALLATALGLVA"
BASE COUNT          893 a         1735 c         1630 g          834 t
ORIGIN      
        1 gcaccctctg ccgcctggtg ctggcgagat gcatttcgat gcggtgccgc tccgcattgt
       61 agaaggcgtg gtgctcgaaa gcgccgagat caaagttgcc gcccaattcg cgattgatgc
      121 gcaccaagag attgagattg aactgcgcgg taacgccctc ggcatcgtta taggcgcgat
      181 agagaatgtc gggcgccttt tccagatcga tgccgacgat cagcaccgat ccgggaccga
      241 ggattcccgc agcccggcgc aggaacgcgc atgcctcatg cggctcgaaa ttgccgatgg
      301 tcgagccggg aaagaacccg gcgcgcgcca tcggcgctat ctcggccggc aatccgctca
      361 tggcggtaaa atccgccacc accggaatga tcgacagatg cgggaaatcg cggcgcagcc
      421 gcgccgcatc ctcacgcaga aaatcgcctg agatatcgac cggcacatag gcttcgacac
      481 ttgcggcggg gcgcagcagg atgcgcgcct tgcggctcga gccgctgccg aactcgatca
      541 gcgcgcagcc cgacgggaag aacgaagcca tggccggcgc atactgctgc agcagcgcaa
      601 gctcgcagcg cgtcgggtag tattccggca ggcgggtgat ctgctcgaac aacgccgacc
      661 cggccgaatc atagaaatat ttggccggca gccgttttgg tttcgcggca aggccggcga
      721 cgacatcggc ggcgaaccct tcggtcgcct cggtcgaggt cgccggtcgc agcgcggttt
      781 gcaaacccct cgtcatcgga cggctcagcg ttcgaattcc gccagacgca gtccactgaa
      841 ctgccagcgc gccgaaggat aaaagaaatt gcgataggtc ttgcgtgaat gacctgcggg
      901 cgtcgccagc gaggagccgc gaagcaccat ctgattgacc atgaacttgc cgttgtattc
      961 gccaagcgct ccggccgcgg cgcgatagcc cggatagggc gaataggcgc tgcgcgtcca
     1021 ctgccagacg acgccgaagg cgtcatcaag cgcgccgctt gcggcggcga cctcccattc
     1081 ggcttcgctc ggcaggtcct tgccgcacca gcgggcaaac gcatcggctt catagtagct
     1141 gatgtggcag gccggtagcg ccggatcgac cggacgcagc cccgcgagcg tcatcgagaa
     1201 ccaggcgccg tcgatcttgc gccaatagcc tggtgcgttc cagccttccg cctcgcacgc
     1261 cgcccacccg tcggagagcc acagactggg cgtcgcataa ccgccgtcgg ccatgaattc
     1321 gagccacgtg ccgttggtga tgagcgtgcg cgcgacgccc accggctgca gcagcacctg
     1381 atgcgcgggg cactcgttgt caaacgagaa ccccgcgcca tcgtgaccga tcagatgaat
     1441 atcggcaacg agcgcgttga ccggcgccgc cgtcgccgcc gcgcgctcgc ttcgcggcca
     1501 ctgccaatcg gcgtcatagg ccggatgcgt ctcgttctgc gcgaaggcgt ggaggatgtc
     1561 ggtgagcatc agttcctgat gctgctgctc gtgatgcagt ccgatctcga cgatcgaggc
     1621 caccgcttcg agatcgtccg tggtctcgat cagcgcggcc acggccgcgt cgacgtgggc
     1681 gcggtaggcg gtcgtttcaa cgacacccgg ccgcgttaca aggccgcgct gcggccgctc
     1741 ctgccgcggg cccgccgcca cgtagtacga gttgaacaga aaggcgaagc gctcgtcgaa
     1801 cacgcgatat ccgggcacaa acggacgcag cagaaaatgc tcgaagaacc aggtcacgtg
     1861 ggcgcgatgc cacttgatcg ggcttgcgtc cggcatcgac tgcacgacct gatcctcggc
     1921 gccgagcggc gcggcgcggc gctcggtctc cgcgcgcacc gcgcggaagg cgtcgagcca
     1981 ataacggcgc gtccgagcac cgccgcgcgc aaccgcggca tcctcgtccg ctggatcaag
     2041 caaccgaacg gcaggaaaag cggcggagcg cgacatcgtt tggtccgaaa aacggggcgg
     2101 gcacgaatag ctgaacgtca atgtaggaag ttaatcagcg catggaagga tggttccata
     2161 ccgattcgcc ccggtccgcg gcaatgccat tcgcgctttg ctaacgggga tgtgatcgga
     2221 cgagaatttc ccttgacctt cattgcggcc tgccaggctc ggatgcagat ggtgattcgc
     2281 ccacgttgca caagctccgc cgaggtgctg ttgtggtccc tcggtgtaat ggggattccg
     2341 cccaagcccg ccgaccggaa cgaacgccgc aggccttgcg agggggagcc taccaaacat
     2401 gcacggacgc ggattgaccg gaggggcatt gctgctcctg agcacgcttg cgacaaacaa
     2461 cgctttcgcc gcgccgtctt gccgcaccgc cggaagctac gagagctggc tcgcgggctt
     2521 cgagcgcgaa gccgcggcgc aaggcatttc ccagcgcgcc attgccgctg ccgtcccttc
     2581 cctcacctac gaccagcgca tcatcaatat cgatcgtggg cagcgagtgt tcacccagac
     2641 attcctgcaa ttctccgacc gcatggccgc cgcgtatcgc attcagcgcg gacaagcact
     2701 catcaaaacg aatgccgcgg tgttcgcgcg catcgagcaa cagtacggcg tgccggccgc
     2761 ggtcatcgtg gcgttctggg cgctggaaag cgacttcggc gccaacatgg gcaactatcg
     2821 ttcgctcagc gccatcgcct ccctcgccta tgactgccgg cgcagcgaca aatttcgcgc
     2881 gcagctcctc gacgcacttc gcctgatcga tcgcggcgat ctgacgccgg acgacatgat
     2941 cggatcctgg gcgggcgaac tcggccagac ccagatgatg ccgtcggaat atttccgcta
     3001 cgcaatcgac tttgacggcg acggccgccg cgatctcgtt cacagcgttc ccgacatgct
     3061 ggcgtcgacc ggaaactatc tcgccggact cgactggcgg cgcggcgagc cgtggctgac
     3121 cgaggtgcgc ttgccggcga acctgccgtg ggatcaggcc gacctcacga tcgagctgcc
     3181 gcgcgcgaaa tgggcggcgt acggcgtgac gtttgccgac gggcggccgc tcccggccga
     3241 caacctttcc gcttcgctgc tgctgcccat gggacggttt gggccggcgt tcctcgccta
     3301 caagaacttc caggtctatc tgcaatggaa caactcgctc gtctattcga cgacggctgc
     3361 ctatctcgcg acccgcatcg acggggcgcc ggcgcttcac cgcggcacgc agccgccggc
     3421 gctgagcttc aacgacgtca aggcgatgca ggggctcttg gcgcgcgccg gctacgacgt
     3481 cggcgccatc gacggatttt tgggactgaa aacgcggcag gcggtcaagg ccatgcagat
     3541 caaatatgcc ttgcctgccg attcctatcc gacggcggag ttgctggcgc gcatgcgcgc
     3601 tccccgctag agattgcggc gcgcgcgagc ggtgcgcaga cgccgccgac ctcgcggcga
     3661 agccttcttg ctttgctggt gcgaccgcgg cccggcgcgc gtcgatcggc gctgccggca
     3721 tgcggccgcg atcgcagccg tcccatattg cgacaagtca ttccctggcc agaccacgtc
     3781 ggcgatggta gaccggtcaa tgcgtggagc cggccggaag cgccgccatc gtgcttggcc
     3841 gggccgcccg agcgcccgcg ccgcagacga agatgctgaa aaggccgaac tttcgctcga
     3901 tgagttccaa ggcgcgctgg gacgccgcgc acggccgaat tcgggatgac tttcgagctg
     3961 ctacattata acgtcgtttg ttgaatagcg tcatttgctg gacaaatttg cggtctgtaa
     4021 cgttggcgtg ctgggtggct tgggtgggtg agacatgaag acggaaccgt ggggtagcca
     4081 tggcggtcgc cgcgtcgcgc gatccgcgtc gataagggct ttgccgttcc gtttctgcat
     4141 attcgccatg cttgcggcgc tgctgccgct ggttgcattc gcccattccg cgtccgcgca
     4201 gaccaatact cccgccccgg tgcgcccgcg gccgcacgcg gctgcacccc gtcccgctgc
     4261 tgcggggcaa gcgccagcaa tgacgcctgc cgccccgttc cccaatccgt cgccgcccgt
     4321 tgccggtccg gccacaacgg ccgccaatcc atcgatgccc cccgctgcga tgcccgcgcc
     4381 acccgccgac gccgcgccgg cggcgacgcc gcccgccccg ccatcgccgc cggtaaacac
     4441 ggcagccccg ggcgctgact cgggcccggc gaacgcgccg gcgccaagca ccaacgcgcc
     4501 gagcgtcaac gcggccccgt cacccccggg cgagacctcg atcagcaccg cagagctgcc
     4561 gcaggatctc tcgccgtggg gcatgttcgt ccatgccgat atcattgtga aattggtgat
     4621 gatcggcctc gccatcgcct cgctggtcac ctggacggtc tggctcgcca aatggctcga
     4681 actgcgcagc gcgcgcacgg cagtacggcg cgacctgcgc acgctggaga attgcccgac
     4741 gctctctcag gcccacgagc agctccgcaa cggcaccagc ccgaccgcgt ttctgatgca
     4801 ggcggccgga aacgagatcc ggctttccgc gagcctgcgc ggcgacggcc tcaaggaacg
     4861 catcgcctgg cagctcgagc gtatcgagca ggcggccagc cgcaaaatgg cgcgcggcac
     4921 cggcgtcctt gccacgatcg gctcgacggc ccccttcgtc ggcctgttcg gcacggtctg
     4981 gggcatcatg gacagcttca tcggcatctc gaaggcgcac accaccaacc tcgccgtggt
     5041 ggcgccgggc atcgccgaag ccctgctcgc gaccgcgctg ggactggtcg cc
//
LOCUS       DATMQB010000100         5650 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3749013, whole genome shotgun sequence.
ACCESSION   DATMQB010000100 DATMQB010000000
VERSION     DATMQB010000100.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5650)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5650)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5650
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3749013"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2928)
                     /locus_tag="VNY79_03180"
     CDS             complement(<1..2928)
                     /locus_tag="VNY79_03180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HWX71482.1"
                     /translation="MLLQGWIVVVIALAYIGFLFLVASYGDRRRELARGSRSRLLIYP
                     LTLAIYCTSWTFFGSVGLASRTGFDFLAIYIGPMLMVGLGYPLIIRLVRLAKGQNITS
                     IADFIAARYGKSQAVAATVALIAIVGMVPYIALQLKAVSSSVGTILAQASAASGTAQP
                     LIGDIALFVALLMAAFAVLFGTRHVDATEHQDGLMVAIATESVVKLVAFLAVGVFVTF
                     VMFPGPLALFARALQLPQTAAMLTHPPPLSTFCAMTALSLFAIVLLPRQFHVAVVENH
                     SEAEIRRAAWLFPLYLVLINLFVVPIATAGLLAFPAGGMDGDMFVLGLPLKAHSELFA
                     LVAFIGGLSAATAMVIVESVALAIMVSNDIVMPLALKRRATQAGAPSGAGAQLLTVRR
                     IAIFAILLLAYVYYRSAGAAQLASIGLLSFAAIAQFAPAFFGGLIWRRGTAVGAIAGM
                     SAGILVWGYTLLLPSISDAGILGARILAEGPFGLALLRPQALFGLDLPPLVHGVVLSL
                     AVNIALYVACSLAGRPTAIERVQADVFVPSTLAPIAPSFRLRRASVTIEELTATIARY
                     LGEERTRESFASFAASRRLTIEPQAEADFQLLQYGEYLLASAIGAASSRLVLSLLLRQ
                     RTVSTKAALKLLDDANAAIHYNREILQTALDHVRQGIAVFDKELALVCWNRQFGEIFD
                     LPHGLTRIGIALDEILRHIAEQSARDPRDLDRQVADRIARYTSEAEPFLERFPERELV
                     IEVRANRMPDGGLVMTFTDITPSVQAAEALERANATLERRVRERTGELTRLNTALERA
                     KAEADDANVSKTRFIAAASHDILQPLNAARLYVTSLIERQRAGEDAELVRNVDASLEA
                     VEEIFAALLDISRLDTGAMKPEMADFRIDELMQRLEVEYAPLAREKRLDLVFVPCSAT
                     VRSDRALLRRLLQNLVSNAIKYTPAGRVLVGCRRRGSCLRIDVCDTGIGIPQAKRRAV
                     FKEF"
     gene            complement(3117..4346)
                     /gene="hemA"
                     /locus_tag="VNY79_03185"
     CDS             complement(3117..4346)
                     /gene="hemA"
                     /locus_tag="VNY79_03185"
                     /EC_number="2.3.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003870 - 5-aminolevulinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0006783 - heme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-aminolevulinate synthase"
                     /protein_id="HWX71483.1"
                     /translation="MDYNSYFTAALARLRDERRYRVFADLERIAGRFPHAVWHSPHGP
                     RNVVIWCSNDYLGMGQHPKVVGAMVETATRMGTGAGGTRNIAGTNHPLVELERELADL
                     HRKEAALVFTSGYISNETGISTLARQMPDCLILSDAWNHNSMIEGVRQAHCEKQIFRH
                     NDMAHLEQLLASADPGRPKLIVFESLYSMDGDTAPINRICDLAERHGAMTYVDEVHAV
                     GMYGPRGGGISERDGAMGRIDVIEGTLAKAFGCLGGYIAGSHVLIDTVRSYAPGFIFT
                     TALPPAVCAAATAAIRHLKTSRWERERHQDRAARTKAVLAAASLPVMTSPTHIVPLFV
                     GDPERCKGASDLLLAEHGVYIQPINYPTVPRGTERLRITPSPYHDDVLIDALAEALVD
                     VWQRLGLPLKERALAAE"
     gene            complement(4504..5271)
                     /locus_tag="VNY79_03190"
     CDS             complement(4504..5271)
                     /locus_tag="VNY79_03190"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HWX71484.1"
                     /translation="MNSDAPPRLDIIIPVYNEGANILPTLQSILRTVKTPPRVLICYD
                     REDDDTLPAINDNRTALGPLAISLVRNRGRGAHGAVLSGFAASTAPFAIVLPADDDYN
                     AGILDAMVARAEAGCDIVCASRFIPGGSMTGCPWLKAALVRAGNFSLFHLARLPTRDA
                     SNGFRLFSRRVMDDIVVESDRGFCYSIELLVKCHRLGWRIGEVPARWFERAHGTSRFQ
                     VIRWLPAYLRWYLYAFATTYLRRPARTVRVKAPSPPA"
     gene            complement(5268..>5650)
                     /locus_tag="VNY79_03195"
     CDS             complement(5268..>5650)
                     /locus_tag="VNY79_03195"
                     /inference="COORDINATES: protein motif:HMM:NF015665.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UDP binding domain-containing protein"
                     /protein_id="HWX71485.1"
                     /translation="QFGLGHAALLINEGLVLHVVDDIKRRYDLANTSVGLLGMAFKAE
                     SDDIRASLSYKFKKVLNGQARAVLTTDPFVTTDPDLRPLNEVIAASDLLILCAPHAAY
                     RDADFKGRPVFDVWGHLQGANIIR"
BASE COUNT          986 a         1756 c         2026 g          882 t
ORIGIN      
        1 gaactccttg aacacggcgc gccgcttcgc ctgtgggatg ccgatgccgg tgtcgcagac
       61 atcgatgcgc aggcacgagc cacggcgccg gcaaccgacc agcacgcgac ccgctggcgt
      121 atatttgatc gcgttcgaaa ccaggttctg gagcaggcgc cgcagcaagg cgcggtcgga
      181 gcgcaccgtg gccgagcagg gcacgaagac gaggtcgaga cgtttctcgc gcgccagcgg
      241 cgcgtattcc acttccagcc gctgcatcaa ttcgtcgatg cggaaatcgg ccatttccgg
      301 cttcatcgcg ccggtatcga gccgcgaaat gtccagcagc gcggcgaata tctcctcgac
      361 cgcctctagc gaggcgtcga cgttgcggac gagttcagca tcctcgccgg cgcgctggcg
      421 ctcgatcagg ctggtgacgt agagccgtgc ggcattgagc ggctgcagga tgtcgtggct
      481 cgcggcggcg atgaagcgcg tcttggagac gttggcatcg tcggcttcgg ccttggcgcg
      541 ctcaagcgcg gtgttgagcc gcgtcagctc gccggtacgt tcgcgcacgc gacgctccaa
      601 cgtcgcgttg gcgcgctcca gggcctccgc cgcctgcacg ctcggggtga tgtcggtgaa
      661 ggtcatgact aggccgccgt cgggcatgcg gttcgcccgt acttcgatca ccagttcgcg
      721 ctcggggaac cgttcgagga acggctcggc ttccgacgtg tatctggcga tgcggtcggc
      781 gacctgccgg tcaagatccc tggggtcgcg cgcgctttgc tcggcgatat ggcggagaat
      841 ctcgtcgagc gcgatgccga tgcgggtgag cccgtgcggc agatcgaaga tctcgccgaa
      901 ctgccggttc cagcagacca gcgcgagctc cttgtcgaac acggcgatgc cctgccgcac
      961 gtggtcgagc gcggtctgca ggatttcccg attgtagtgg atcgcggcgt tggcatcgtc
     1021 gagcagcttg agcgcggcct tggtcgagac cgtgcgctgg cgcagcagca gcgagaggac
     1081 gaggcgcgag gacgcggcgc cgatcgccga cgccaacaga tattcgccgt attgcagcag
     1141 ctggaagtcg gcctcggcct gcggctcgat cgtgaggcgg cgcgaggcgg cgaagcttgc
     1201 gaaggattcg cgcgtgcgtt cctcgccgag gtagcgggcg atggtcgccg tgagctcctc
     1261 gatcgtgacc gacgcgcgcc gcagccggaa gctcggcgcg atgggcgcaa gcgttgaggg
     1321 cacgaacacg tcggcctgca cgcgctcgat cgcggtgggc cgcccggcga gcgagcaggc
     1381 gacatagagg gcgatgttga cggcgagact gagaacgacg ccgtgaacga ggggcggcag
     1441 gtcgagcccg aacaaggcct ggggacgcag cagggcgagg ccgaacggac cttcggcgag
     1501 aatgcgcgcg ccgaggatgc cggcgtcgga gatgctcggc agcagcaggg tatagcccca
     1561 caccagaatg ccggcgctca tgccggcgat ggcgcccacg gcggtgccgc gccgccagat
     1621 caatccgccg aagaacgccg gcgcgaactg ggcgatggcg gcgaacgaaa gcaggccaat
     1681 ggaggcgagc tgcgccgcgc ccgccgagcg gtagtacaca taggcgagga gaaggatggc
     1741 aaagatcgcg atgcggcgca cggtgagaag ctgcgccccg gcgccgctgg gcgcgccggc
     1801 ttgcgtcgcc cggcgcttga gcgcgagcgg catcacgatg tcgttcgaca ccatgatcgc
     1861 gagcgcgacg gattcgacga tcaccatggc ggtcgcagcg gagaggccgc cgatgaaggc
     1921 gacgagggcg aacagttcgg agtgcgcctt gagcggcagc ccgagcacga acatgtcgcc
     1981 gtccatgccg ccggcgggaa acgccagcag gcccgcggtc gcgatcggca ccacgaacaa
     2041 attgataagg acgaggtaca gcgggaacag ccacgcggcg cggcggatct cagcctcgct
     2101 gtggttctcg accacggcaa cgtggaactg ccgcggcaac agcacgatgg cgaacagcga
     2161 cagcgccgtc atcgcgcaga acgtgctgag cggcggcgga tgcgtcagca tcgccgcggt
     2221 ctgcggcagt tgcagcgcgc gcgcaaacag cgccagcggc ccggggaaca tgacgaaggt
     2281 cacgaagacg ccgacggcga gaaaagcgac gagcttgacg accgactcgg tggcgatcgc
     2341 taccatcaat ccatcctggt gctcggtggc gtcgacgtgc cgggtcccga acaggaccgc
     2401 gaaggccgcc atcagcagcg caacgaacag cgcgatgtcg ccgatcagcg gttgcgcggt
     2461 gccgcttgcc gccgaagcct gggcgaggat ggtgccgacc gatgacgaca cggctttgag
     2521 ctggagggcg atgtagggga ccatgccgac gatcgcgatg agcgccacgg tcgccgccac
     2581 ggcctggctc ttgccgtagc gcgcggcgat gaagtcggcg atcgaggtga tgttctggcc
     2641 tttggcgagc cgcacgaggc ggatgatgag cgggtagccg aggccgacca tgagcatcgg
     2701 cccgatatag atggcgagga agtcgaaccc ggtgcgcgaa gcgagaccga ccgagccgaa
     2761 gaaggtccac gaggtgcaat agatggcgag ggtcaatgga tagatcagca gccgcgaccg
     2821 gctgccgcgc gcgagctcgc gcctgcgatc gccgtagctc gccaccagga acaaaaagcc
     2881 gatgtaggcg agcgcgatga cgacaacgat ccagccctgc agcagcatgg cgtttcctga
     2941 tcgatccgcg gcgcctttgc cggctgtttg cgcgggtttt cgcgcaagtc accacagttt
     3001 gccggggctg tccatcggac gccgggtggg cggtgccagc aaccaaatac cgctgcccgc
     3061 gctgttgcaa aagaacaatc tctgatccgt ggccgccggt taccgtggtt ccggcgtcac
     3121 tcggccgcga gcgcgcgctc cttcagcggc agccccaacc gctgccatac atcgacaagc
     3181 gcctcggcga gcgcgtcaat cagcacgtcg tcgtgatacg ggctcggtgt gatgcgcagc
     3241 cgttcggtcc ccctcggcac cgtcggatag ttgatcggct gaatgtagac gccgtgctcg
     3301 gcaagaagga gatcgctcgc ccctttgcag cgctcggggt cgccgacgaa gagggggacg
     3361 atgtgcgtgg ggcttgtcat caccggcaga gaggcggccg cgagcacggc cttggtccgc
     3421 gcggcgcggt cctggtgccg ctcccgctcc caccgcgagg tcttgaggtg gcggatcgcc
     3481 gcggtggccg cggcacacac cgccggcggc agcgcggtcg tgaagatgaa gccgggcgcg
     3541 taagagcgca ccgtgtcgat cagcacgtgc gagccggcga tatagccgcc gaggcagccg
     3601 aacgccttgg cgagcgtccc ttcgatcacg tcgatgcggc ccatggcgcc gtcgcgctcg
     3661 ctgatgccgc cgccgcgcgg tccgtacatg ccgacggcgt gcacttcgtc gacataggtc
     3721 atcgcgccgt ggcgttcggc gagatcgcag atgcggttga tcggtgcggt atcgccgtcc
     3781 atggagtaaa ggctctcgaa cacgatcagc ttgggccggc cgggatcggc agaagcgagc
     3841 agctgttcga ggtgggccat atcgttgtgg cggaaaatct gcttctcgca gtgtgcctgg
     3901 cgcacgccct cgatcatcga attgtgattc caggcatccg acaggatgag gcagtccggc
     3961 atctgccgcg cgagcgtgga gattccggtc tcgttggaga tgtagcccga agtgaagacc
     4021 agggccgctt ccttgcggtg caggtcggcg agttcgcgct cgagttcgac gagcgggtga
     4081 ttggtaccgg caatattgcg ggtgccgccg gcgccggttc ccatccgcgt cgcggtctcg
     4141 accatggcgc cgaccacttt ggggtgctgg cccatgccga ggtagtcatt cgagcaccag
     4201 atcacgacgt tgcgcgggcc gtgtggcgaa tgccatacgg cgtgcgggaa gcgtccagcg
     4261 atgcgctcga ggtcggcaaa cacgcggtag cgccgctcgt cccgcaggcg ggccagagcg
     4321 gcggtgaaat aactattgta gtccatcggt tccccgcctc ccggagatcg cagcgcccgg
     4381 ggacgccttt ttagaggggt tccaagcggg ttgtcgaggc ggtctttggc gtaaaatcgt
     4441 cgcgccgtat ggtgcggatg acggcgggca gccgtggtaa atgcacggtt ttcggccgcc
     4501 cgctcaagca ggtggcgacg gcgccttcac acgcacggtg cgggccggcc gcctgaggta
     4561 ggtggtggcg aacgcgtaga ggtaccagcg cagataggcc ggcagccacc tgatgacctg
     4621 gaagcggctg gtgccgtggg cgcgttcgaa ccaccgcgcc gggacttcgc caatacgcca
     4681 gccgagccga tggcatttca ccagcaactc gatgctgtaa cagaagccgc ggtccgattc
     4741 gaccacgatg tcgtccatca cacgccgcga gaacagacgg aaaccgttgc tggcgtcccg
     4801 cgtcggcagg cgtgcgaggt gaaagagcga gaaattgccg gcccgcacca gtgccgcctt
     4861 gagccagggg cagccggtca tgctgccgcc cgggatgaag cggctggcgc agacgatgtc
     4921 gcagccggcc tcggcgcgcg cgaccatggc gtcaagaatg ccagcattgt agtcgtcgtc
     4981 cgccggcagc acgatcgcaa acggcgccgt gctcgcggca aagcccgaga gcacggcgcc
     5041 atgggcgccg cgcccgcggt tgcgcaccaa tgaaatcgcc agcgggccca gcgccgtgcg
     5101 attgtcgttg atcgccggca gcgtgtcgtc gtcttcacgg tcgtagcaga tgagcacgcg
     5161 cggcggtgtc tttacggtgc gcagaatcga ctgcagcgtc ggcaaaatgt tggcgccctc
     5221 gttgtagacc gggatgatga tgtcgaggcg cggcggcgcg tccgaattca tcggatgatg
     5281 ttggcgcctt gcagatggcc ccagacgtcg aacaccggtc ggcccttgaa gtcggcgtcc
     5341 cggtaagcgg cgtgcggcgc gcacaggatc aggagatcgc tcgcggcaat cacttcgttg
     5401 agcggccgta ggtcggggtc cgtggtcacg aacgggtcgg ttgtgagcac ggcgcgcgcc
     5461 tgcccgttca acaccttctt gaacttgtag ctgagcgaag cgcggatatc gtcgctttcc
     5521 gccttgaagg ccatgccgag caggccgacg ctggtgttgg cgaggtcgta gcggcgcttg
     5581 atgtcgtcga ccacgtgcag caccagcccc tcgttgatca gcagggcggc atggccgagg
     5641 ccgaactggt
//
LOCUS       DATMQB010000101         4326 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1889459, whole genome shotgun sequence.
ACCESSION   DATMQB010000101 DATMQB010000000
VERSION     DATMQB010000101.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4326)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4326)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4326
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1889459"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..172
                     /locus_tag="VNY79_03200"
     CDS             <1..172
                     /locus_tag="VNY79_03200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71486.1"
                     /translation="IEHDMEAVFALADRLTVLVYGRIIASGDPEAVRADTAVRQAYLG
                     EKDGAQQGGRHG"
     gene            165..881
                     /locus_tag="VNY79_03205"
     CDS             165..881
                     /locus_tag="VNY79_03205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX71487.1"
                     /translation="MAEVPLLEIAGIETSYGASRVLFGISLAIAAGEMVSLLGRNGMG
                     KTTTVRSIMGLTPPTAGSVRFAGTELRTLPAYRIAKLGLGLVPEGRQVFPNLTARENL
                     LATAANRSGAAAPWTLDRIFALFPRLAARAGAMANLLSGGEQQMLAIGRALMTNPRLL
                     ILDEATEGLAPLIRDEIWRCLELLRAAGQSILVIDKNVDALTRIADRHYIIERGRVVW
                     AGASKELAAAPDIQHRYLGI"
     gene            complement(944..1654)
                     /locus_tag="VNY79_03210"
     CDS             complement(944..1654)
                     /locus_tag="VNY79_03210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX71488.1"
                     /translation="MLSIEGLKVAYGHVEALRGIDLEARQGEITAIIGSNGAGKTSTL
                     MAISGLAPISAGDIRFEGQSIARRRPHDITRLGITHILEGRQLFADQTVADNLLLGGY
                     TRLPRHRARVAELLEREMTRFPILRERRAQLAGTLSGGEQQMLAIARGLMSEPRLILM
                     DEPSMGLAPLVVKGIVSTIRSLREEGATIVLVEQMAAVALRLADRAYVLENGQIKLSG
                     TGAELAHTPEVRRAYLGG"
     gene            complement(1647..3461)
                     /locus_tag="VNY79_03215"
     CDS             complement(1647..3461)
                     /locus_tag="VNY79_03215"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     ATP-binding protein/permease"
                     /protein_id="HWX71489.1"
                     /translation="MRLPIFAYSGPRDWALVALAALVLALLPIVFDDPFFILVMQSLG
                     YLFIATLGLDILVGWTGQISLGHAGLYAVGAYTSALAATRLGLPFWLSAPLGVTLAGL
                     FGVALAVPSLRARGPYLAMVTIAFGFMAEVTSNRWSLTGGPMGIMSIPAPTLPDGSEM
                     TARQYFWLIAGVALMCQLLAANLFRARLGRTLLALQGSEVAAQSVGINVYRYKVLAFV
                     ISSVYAGIGGVFFAHQNGFINSDTFVFSLSVSFLTSALMGGTGTLLGPLVGSVILNLI
                     PTVFASLQEYQLYIYGGIILITIVFLPKGIVGSLRQTALFRRWQRPPAPIEADPSVLD
                     FARGTAGNEPVLAVRGLAKNFGGIRALSGVDVAIERGSVHGLIGPNGSGKSTFVNVVT
                     GVFRPSAGTIILGGKALPPQGPHRMARYGITRTFQAIRLFGELSVIDNVMVGFHLQLR
                     CGFFANLLQTRAAVAEEAAFRRKAMALLEFVGIAERAHDRAQNLSYGQQRLLEIARAL
                     AARPQLLMLDEPAAGVNPTELHHLARIIRDIKAAGVTLLVIEHHMELIMGISDVISVL
                     DFGQKIAEGSAATVRGDPKVIEAYLGVAEPEEAVPAHA"
     gene            complement(3463..>4326)
                     /locus_tag="VNY79_03220"
     CDS             complement(3463..>4326)
                     /locus_tag="VNY79_03220"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX71490.1"
                     /translation="WQALVSGLSIGSIYALIAEGYYITFITTGALNFSQGEFLMIGAL
                     FGLTCYVSFGLPYALAVFAVVLLSSAMGAGLERVAIRPVMRHALSLSWVLSTVAVSIV
                     LKNAAVQLWGPEQIKFPSPFGDAVVLIGSAGIFPQELFIIFAALGTVFALQVFLRRSL
                     LGKALIAVAYNRNAAAVMGINVKRMVVLAFVLSSALAGLGGILIAPITFAWAYMGTTP
                     GIKAFAAAIFGGLENPIGILIGGLVIGLLEQLFGIVNSNFKEGVTFLFILIVLAISPT
                     GLMGRREISKV"
BASE COUNT          805 a         1425 c         1443 g          653 t
ORIGIN      
        1 gatcgagcac gacatggaag cagtgttcgc gctcgccgac cgcctcaccg tgctcgtcta
       61 cggccggatc atcgccagcg gcgatccgga agcggtccgg gccgacaccg ccgtgcgcca
      121 agcttatctc ggtgaaaagg atggcgcgca gcaagggggg cgtcatggct gaggtccctc
      181 tgctcgagat cgccggcatc gagacgagct acggcgcgag ccgcgtgctg ttcggcattt
      241 cgctcgccat cgccgccggc gagatggtgt cgctgctcgg ccgcaacggc atgggcaaga
      301 ccacgaccgt gcgctcgatc atggggctga cgccgccgac ggcgggctcg gtccgcttcg
      361 ccggcaccga gctgcgcacg ctgcccgcct accgcatcgc caagctgggg ctgggccttg
      421 tgcccgaagg ccgccaggtc tttcccaatc tcacggcgcg cgaaaatctt ctcgccaccg
      481 cggccaaccg cagcggcgcc gccgcgccat ggacgctcga ccgcatcttc gccttgtttc
      541 cgcggctcgc cgcccgcgcc ggcgccatgg cgaacctgct ctccggcggc gagcagcaga
      601 tgctggcgat cggccgggcg ctgatgacca atccgcggct cctgatcctc gatgaggcga
      661 ccgaaggcct cgcgccgctc attcgcgacg agatctggcg ctgcctcgaa ctcctccgtg
      721 ccgccgggca gtcgatcctg gtcatcgaca agaacgtcga tgcgctgacc cggatcgctg
      781 accgccacta tatcatcgag cgcggccgcg tcgtgtgggc gggggcctcg aaggagctcg
      841 ccgccgcgcc cgacatccag caccgctatc tcgggatttg agccgacgat cgtcgcgccg
      901 gttttcgttc cgccggttct ggaccgacca agacaatcaa ggttcagccg ccgagatagg
      961 cgcggcgcac ctcaggcgtg tgggcgagtt cggcgccggt gccggagagc ttgatctgtc
     1021 cgttttcgag cacataggca cggtcggcca ggcgcaatgc cacagccgcc atctgctcga
     1081 ccaggacgat ggtcgctcct tcctcgcgca gtgagcggat cgtgctcacg atccccttga
     1141 cgaccagcgg ggccagtccc atcgaaggct cgtccatcag gatcaggcgc ggctccgaca
     1201 tgagcccgcg ggcgatcgcg agcatctgct gctcgccgcc cgacagcgtg ccggcgagct
     1261 gggcgcgacg ttcacgcagg atcgggaagc gcgtcatctc acgctcgagc agctcggcaa
     1321 cgcgcgcgcg atggcgcggc aggcgcgtgt agccgccgag cagcaggttg tccgcgaccg
     1381 tctggtcggc gaacaactgg cgaccttcga gaatgtgggt gatgccgagc cgcgtgatgt
     1441 cgtgcggccg gcgccgcgcg atgctctggc cttcgaagcg aatatcgccg gcactgatcg
     1501 gcgcgagccc ggagatcgcc atcaaggtcg aggtctttcc cgccccgttc gaaccgatga
     1561 tcgccgtgat ttcgccctga cgcgcctcga ggtcgatgcc gcgcaacgcc tcgacatgac
     1621 cgtaggcgac cttgagcccc tcgatgctaa gcatgggccg gcaccgcctc ctcgggttcg
     1681 gcgacgccca gataggcctc gatcaccttg ggatctccgc gcaccgtggc ggcgctgcct
     1741 tccgcgatct tttgtccgaa atccagcacc gaaatgacgt cggagattcc catgatcagc
     1801 tccatgtggt gctcgatcac gaggagcgtg acgccggccg ccttgatatc gcggatgatg
     1861 cgcgcgagat gatgcagctc ggtcggattg acgccggcgg ctggctcatc gagcatgaga
     1921 agctgcggcc gtgctgcaag cgcgcgggcg atctcgagga gccgctgctg gccgtaggaa
     1981 agattctgcg cgcgatcgtg cgcgcgctcg gcgataccga cgaattccag gagcgccatg
     2041 gccttgcgcc ggaacgccgc ctcctcggcg acggccgcac gggtctgcag cagattggca
     2101 aagaatccgc atctgagctg cagatgaaaa ccgaccatga cgttgtcgat gactgaaagt
     2161 tcgccgaaca gccggatcgc ctgaaatgtg cgcgtgatgc cgtagcgggc catgcggtgc
     2221 ggtccctgcg ggggcagggc cttgccgccg aggatgatcg tgccggcgct cggccggaac
     2281 acgcccgtca ccacgttgac gaaagtgctc ttgccggagc cgttcgggcc gatcaggccg
     2341 tgcacgctgc cgcgctcgat cgccacgtcc acgccgctca acgcgcgaat cccgccgaaa
     2401 ttcttcgcca ggccgcgcac cgccagcacg ggctcgttgc cggccgtacc gcgagcgaag
     2461 tcgaggacgc tgggatcggc ttcgatcggg gccggcgggc gctgccaacg gcggaagagg
     2521 gcggtttgcc gcaagctgcc gacaatccct ttgggcagga acacgatcgt tatcaggatg
     2581 atgccgccgt agatataaag ctgatattcc tgcaggctgg cgaacacggt cggaatcaaa
     2641 ttgagaatga cactgccgac caatggtccg agcagcgtgc cggtgccccc catcagcgcc
     2701 gaggtgagga aggaaaccga gagcgagaac acgaaggtat cgctgttgat gaagccgttc
     2761 tggtgggcga agaacacgcc gccgatgccc gcgtagaccg agctgatgac gaaggcgagg
     2821 accttgtagc ggtagacgtt gatgccgacc gattgggcgg cgacctcgct gccctgcagc
     2881 gccagcagcg tgcggcccaa gcgagcgcga aacaggttgg cggcgaggag ctggcacatg
     2941 agcgccacgc cggcgatgag ccagaagtac tgccgcgccg tcatttcact tccgtccggc
     3001 agggtcggcg ccgggatcga catgattccc atcggtccgc cggtgaggct ccaccggttg
     3061 ctcgtcacct cggccatgaa gccgaacgca atcgtcacca tcgcgaggta gggaccgcgc
     3121 gcccgcagcg acgggaccgc gagcgcgacg ccgaacaatc cggcaagggt cacgccgagc
     3181 ggcgcgctca gccagaacgg aaggccgagc cgcgtcgccg cgagtgcgct ggtgtaggcg
     3241 ccgaccgcgt agagcccggc gtggccaagc gagatctgcc cggtccaccc gaccaagatg
     3301 tcgaggccca gcgtggcgat gaacagatag ccgagcgact gcatcaccag gatgaaaaat
     3361 ggatcgtcga agacgatcgg cagcagcgcc agcaccagcg ccgccagcgc gaccagcgcc
     3421 caatcgcgcg gcccggaata ggcgaaaatc ggcagccgca tgtcagacct tgctgatctc
     3481 gcgtcggccc atgaggccgg tcgggctgat tgccagcacg ataaggatga acaggaaggt
     3541 gacgccttcc ttgaagttcg agttgacgat cccgaacaac tgctcgagca gcccgatcac
     3601 caggccgccg atcaggatgc cgatcggatt ctcaaggccg ccgaagatcg ccgccgcaaa
     3661 tgccttgatg ccgggcgtcg tacccatgta ggcccaggcg aaggtgatcg gcgcgatcag
     3721 gatgccgccg agcccggcca gggctgacga caggacgaag gcgaggacga ccatgcgttt
     3781 cacgttgatc cccataacgg ccgcggcatt gcggttgtag gccaccgcga taagggcctt
     3841 gccgagcagc gatcggcgca ggaacacctg cagcgcgaag acggtgccga gcgcggcgaa
     3901 gatgataaac aactcctgcg ggaaaatgcc ggccgagccg atcagcacca ccgcgtctcc
     3961 gaacggggag ggaaacttga tctgctcggg cccccagagc tgcaccgccg cgttcttgag
     4021 aacgatgctg accgcgaccg tgctgagcac ccaggaaagc gaaagcgcat ggcgcatcac
     4081 cgggcggatg gcaacgcgtt cgagcccggc gcccatcgcc gaggacagca gcaccacggc
     4141 gaatacggca agcgcatagg gcaagccgaa gctcacgtag caggtgagcc cgaacagcgc
     4201 cccgatcatc aggaactcgc cctggctgaa gttcaaggcg ccggtggtga tgaaggttat
     4261 gtaatagcct tcggcaatga gagcgtagat gctgccgatc gacaggccgc tgaccagggc
     4321 ctgcca
//
LOCUS       DATMQB010000102         5501 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_338726, whole genome shotgun sequence.
ACCESSION   DATMQB010000102 DATMQB010000000
VERSION     DATMQB010000102.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5501)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5501)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5501
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_338726"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..508)
                     /locus_tag="VNY79_03225"
     CDS             complement(<1..508)
                     /locus_tag="VNY79_03225"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030272 - 5-formyltetrahydrofolate
                     cyclo-ligase activity [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HWX71491.1"
                     /translation="MAEAPAIEKSRLRAEAMTRRDALSADQRQAASEAIAARPFPLPI
                     RTGTIVSGFMPLMSEINPLPLLRKLAREGARLALPVIGGRGQPLVMREWTWGEPLAAG
                     VWGIREPLAQAPAVDPDIVLTPLLAFDRARHRLGYGGGYYDLTIAQLRGRKTIVAVGL
                     AFAVQEVFT"
     gene            complement(637..795)
                     /gene="ssrS"
                     /locus_tag="VNY79_03230"
     ncRNA           complement(637..795)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="VNY79_03230"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(945..1328)
                     /locus_tag="VNY79_03235"
     CDS             complement(945..1328)
                     /locus_tag="VNY79_03235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HWX71492.1"
                     /translation="MSQVNVTINGRQFRMACEDGQEDHVTDLARDLDARIEGLRAKFG
                     EIGDTRLTVMAALTVADELAGMGLRVKRLEQELAALQDARVSAADRSKTAQAAVAAAL
                     AAAAERVENVTRKLNRTIGGSGALG"
     gene            complement(1370..1648)
                     /locus_tag="VNY79_03240"
     CDS             complement(1370..1648)
                     /locus_tag="VNY79_03240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014439722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4164 family protein"
                     /protein_id="HWX71493.1"
                     /translation="MSETDSIEIASRRLSLALEALDEAAEREREAGRGGDALAAQIQA
                     LDTDRARLASELDHATARSRGLEAANREVVQRITHAIETIRRVLADDD"
     gene            1901..3997
                     /gene="tkt"
                     /locus_tag="VNY79_03245"
     CDS             1901..3997
                     /gene="tkt"
                     /locus_tag="VNY79_03245"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004802 - transketolase activity [Evidence
                     IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HWX71494.1"
                     /translation="MTIPDGLHAAGAALAQASHFPSADPAARAEHDRMANAIRALAMD
                     AVEQAKSGHPGLPMGAADVATVLFTRFLTFDPADPAWPDRDRFVLSAGHGSMLLYAVL
                     HLLGYEKMKIGEIKRFRQLGSLTPGHPEHRQASGIETTTGPLGQGLANAVGMAIAERH
                     LAALFGSAIVDHKTYVLASDGDLMEGISQEAIALAGHLKLRKLIVLYDDNGISIDGPT
                     ALADSVDQVQRFKSAGWAATRIDGHDPAAIAAALDAALESDRPSLVACRTTIGFGAPT
                     KGGTEKAHGAPLGADEIAAARARLGWSAPAFEIPASIRDAWRAAGARGRPARLAWAER
                     LAALDADKRAEFERRTHSELPSLLAAAVRDVKEKLSASPKEIATRVASEMALDALTVA
                     LPEMVGGSADLTGSNNTRPKAMKVLSAGDYAGRFIHYGVREHGMAAAMNGMALHGGII
                     PYSGTFLVFSDYCRPAIRLAALMGQRVIHVMTHDSIGLGEDGPTHQPVEHLAALRAIP
                     NLKVFRPCDAVETIECWQLALETTGGPSVLALTRQNVPQIRQGFDEANRCARGAYELI
                     AAPSPSSSPRAGDAASADVSLFASGSEVAVAVAARELLAARGISARVVSVPCFEHFLA
                     APEAERAAVIGKARVNVAVEAGIREGWDAIIGSDGAFVGMTGFGASAPYKDLYRHFGV
                     TPEKVTDTALARLQGR"
     gene            complement(3994..4818)
                     /locus_tag="VNY79_03250"
     CDS             complement(3994..4818)
                     /locus_tag="VNY79_03250"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HWX71495.1"
                     /translation="MPQPQVSPSNIAGFPALRTAGTADRPLLLFIHGAFASHEPFANW
                     MQTLGRDGWRCVAAGRRNQLGHGPAGVADVTINDYVADTLRVIDALNEKPVVIGHSLG
                     GLIAQKIAELGKCSAAVLVAPAPSGMLTAQLAALPALLPMVPSILRGRPLLPSCATCE
                     AIVLNRVPQSERARIHGALVHESGKVYREMIFGTFRVDAQKVRCPLLVVGGSDDRVVS
                     VTLLRATAKYYGAALKLYEGRGHWLLEEPGWDKIASDFGAWLRTTLAVPAPLPVAS"
     gene            4981..5379
                     /locus_tag="VNY79_03255"
     CDS             4981..5379
                     /locus_tag="VNY79_03255"
                     /inference="COORDINATES: protein motif:HMM:NF024212.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HWX71496.1"
                     /translation="MTLETVERVRALGITQMQPSFPWLLGNLDTEGTRIGALARRMGT
                     SRQAASQLSKEIEAAGLVERRPDPHDRRGVIVSFTPHGRSVLASAVEVMTEIEAEYAG
                     VISDQGMTRLKRSLKRLLDRVDKSGEFGLD"
BASE COUNT          894 a         1880 c         1819 g          908 t
ORIGIN      
        1 cagtgaagac ctcctgaact gcaaacgcca agccgacggc gacaatggtc ttacgcccgc
       61 gcagttgggc aattgtgaga tcgtagtagc cgccgccgta gccgagacga tggcgggcgc
      121 ggtcaaaggc gaggagcggc gtcagaacaa tgtctggatc gaccgcgggt gcctgcgcca
      181 gcggctcgcg aatgccccag acgccggcgg cgagcggctc gccccatgtc cattcgcgca
      241 tgacgagcgg ctggccgcgg ccgccgatga ctggaagcgc gagccgtgcg ccctctcgcg
      301 cgagcttgcg cagcagcggc agcgggttga tctcgctcat gagcggcatg aagccggaga
      361 cgatcgtgcc ggttcgtatc ggcaacggaa acggccgcgc ggcgatcgcc tccgacgcgg
      421 cctggcgttg atcggcggac agcgcgtcgc ggcgcgtcat cgcctcggcg cggagccggc
      481 tcttttcaat cgcaggcgct tcggccatgt cgcagtcaat ttccggctgg gcgccgggca
      541 gccacatctg aaggtcgcgc caagctagag atgcgcgagg ccggagcaag cccccgggcc
      601 ttgaccaatt cgcgaccgta gatatgagcc gggaagtgcg gagccgcgcc ggccgttgga
      661 gcgctcgatc ccgggttccc tacgaaaagt aggtgggcgc catatgtccg agcccacgag
      721 cccggccagg gacagctccc gtcaggatcg ataaggcccc ggggatttgg ctcctgacgt
      781 accaggcagc tccgcatggc caatgtaatg cgcgccggcg gccgaagcta cttcatctcg
      841 gccgcacgcc tcgcctgtcg tggggatctg tctctccgtc cggcgggtgg gccgggcgtg
      901 tcgctgcgcg ccgcggcgcc tctcccgcag gcgggaacgc gaactcagcc gagcgcgccg
      961 ctgccgccga tggtccggtt gagttttcgg gtgacgtttt cgacacgctc ggcggcggcg
     1021 gcgagcgccg cggcgaccgc cgcctgtgcg gtcttgctgc gatccgctgc gctaacccgc
     1081 gcatcctgca gggccgccag ctcctgctcc agccgtttga cgcgcagccc catcccggca
     1141 agctcgtcgg caacggtgag cgccgccatg acggtgagcc gggtatcgcc gatctcgccg
     1201 aacttggcgc gcaagccctc gatgcgggcg tcgagatcgc gggcgagatc ggtgacgtga
     1261 tcctcctggc cgtcctcgca ggccatgcgg aactgccggc cgttgatggt gacgttgacc
     1321 tgggacatct gcctccctcg gctcacgctc gcgcaacccc gcgcccggct caatcgtcgt
     1381 cggccaggac gcgccggatc gtttcgatcg catgagtaat gcgttgcacc acttcccggt
     1441 tggcggcttc aagcccgcgc gagcgcgccg tcgcgtggtc gagttcgctg gcaaggcgcg
     1501 cgcgatcggt gtccagagcc tggatctgcg ccgcgagcgc gtcccctccg cggccggcct
     1561 cgcgctcgcg ttcggccgct tcgtccagcg cctcaagtgc cagcgaaaga cgccggctcg
     1621 ctatctcgat tgaatcggtc tcgctcattt cggccatccg ccaaggccat tgccgctgcc
     1681 gcaccgctcg tgaaagttat gcgacagcaa ctatttatag aaagaacctt acgtcgcgtg
     1741 gagcgagagc gtcaacgcct aaagccggcc gcgccagcac cctgtgcacg atccggccgg
     1801 cgcggcggcg cacattgact caagggtccc ccatgctatc tgtgcgccgg cttttcccat
     1861 cactgcggcg cgtcagcatg agcgccgcct ggcccgtttc atgacgatcc cggacggtct
     1921 tcacgcggcg ggcgcagccc tcgctcaagc ctcccatttt cccagcgccg acccggccgc
     1981 gcgcgccgag cacgaccgca tggcgaacgc gatccgcgcc ctggcgatgg acgctgtcga
     2041 gcaggcgaag tcaggtcatc cgggcctgcc gatgggcgcc gccgacgtcg ccaccgtcct
     2101 gttcacccgc ttcctcacgt tcgatccagc cgatcccgcc tggcctgacc gtgatcgctt
     2161 cgtgctctcg gccggccacg gctcgatgct gctgtacgcg gtgcttcatc ttctcggcta
     2221 cgagaagatg aagatcggcg aaatcaaacg cttccgccaa ctcggctcgc tcacgcccgg
     2281 tcacccggaa cacaggcaag cgtccggaat cgagaccacg accgggccgc tcggccaagg
     2341 ccttgccaac gccgtcggca tggccatcgc cgaacgccat ctcgccgcgc tgttcggcag
     2401 cgccatcgtc gatcacaaga cctacgtgct cgcctccgac ggcgacctga tggaaggcat
     2461 cagccaggag gcaatagcgc tcgccggcca cctgaagctg agaaagctga tcgttctata
     2521 cgacgacaac ggcatctcga tcgacggtcc caccgccctt gccgattccg tcgaccaggt
     2581 gcagcgcttc aagtctgcgg gctgggcggc gacgcgcatc gacggtcacg atcccgctgc
     2641 cattgccgcg gctctcgatg ccgcactgga atccgacagg ccatcgctcg ttgcctgccg
     2701 cacgacgatc ggcttcggcg cgccgacgaa gggcgggacc gagaaggctc atggcgcccc
     2761 gctcggcgcg gatgagatcg ccgcggcgcg cgcacggctc ggctggagcg cgccggcctt
     2821 cgagattccc gcgagcatcc gcgacgcgtg gcgcgccgcc ggcgcgcgcg ggcgcccggc
     2881 gcgtctcgcc tgggccgagc gccttgccgc gctcgacgcg gacaagcgcg ccgagttcga
     2941 acggcgcacg cacagcgaac tccccagctt gctcgcggcc gcagtacgcg acgtgaagga
     3001 aaagctcagc gcctcgccga aggagatcgc cacccgcgtc gcgtctgaaa tggcgctcga
     3061 cgccttgacc gtagcgttgc cggagatggt cggcggctcg gccgacctca ccggctccaa
     3121 caatacgcgg ccgaaagcga tgaaagtgct gagcgccggc gactatgccg gccgcttcat
     3181 ccactacggc gtgcgcgagc acggtatggc cgctgccatg aacggcatgg cgctgcacgg
     3241 cggcatcatt ccgtattccg gcacattcct ggtcttctcc gactattgcc ggccggcgat
     3301 ccgccttgcc gcgctgatgg gccagcgcgt cattcacgtg atgacgcatg attcgatcgg
     3361 actgggcgag gacgggccga cgcatcagcc ggtcgagcat ctggctgcct tgcgcgccat
     3421 cccgaacctc aaggtgtttc ggccatgcga cgcggtcgaa acgatcgagt gctggcagct
     3481 tgcgctcgag acgaccggcg gaccgagcgt gctggcgttg acgcgacaga acgtgccgca
     3541 aatccggcaa ggcttcgacg aggccaatcg ctgcgcgcgc ggcgcctatg agctgatcgc
     3601 ggcgccctcg ccctcttctt ccccgcgcgc tggcgatgcg gcgtccgccg acgtgtcgct
     3661 gttcgcctca ggctccgaag tcgccgtcgc ggtcgcggcg cgcgaacttc tcgctgcacg
     3721 cgggatctcc gcccgggtcg tctcggtgcc gtgctttgag cacttcctcg ccgcaccgga
     3781 agcagagcgc gccgccgtca tcggcaaggc cagggtcaat gtcgccgtcg aagccggcat
     3841 tcgcgagggc tgggatgcga tcatcggttc cgatggagcg ttcgtgggaa tgaccgggtt
     3901 tggggccagc gctccctaca aggaccttta ccggcacttc ggcgttacac cggagaaggt
     3961 aaccgacacc gcgctcgcca ggctccaggg ccgctagctc gccacgggca gcggcgcggg
     4021 gactgcgagc gtcgtgcgca gccacgctcc gaagtcactc gcaatcttgt cccagccggg
     4081 ttcttcaagc agccaatggc cgcgcccctc atagagcttg agcgcagcgc cgtaatattt
     4141 cgccgtcgcc cgcagcagcg tcaccgatac gacgcgatca tcgctgccgc cgaccaccaa
     4201 cagcggacag cgcacttttt gtgcatcgac gcggaacgtg ccgaagatca tctcgcgata
     4261 gactttgccg gactcatgca ccagggcgcc gtggatgcgc gcgcgctcgg attgcggaac
     4321 gcggttgagg acgatcgcct cacaggtggc acagctcggc aacagcggcc gtcccctcag
     4381 gatactcggc accatcggca gcagcgccgg aagcgcggcc agctgcgcgg tcagcatccc
     4441 tgacggcgcc ggggcgacca gaactgcggc gctgcacttt cccaactcgg cgatcttctg
     4501 tgcgatcaga ccgccgaggc tgtgaccgat gacgaccggc ttctcattga gggcgtcgat
     4561 gacgcggagg gtgtcggcga cgtagtcgtt gatggtcacg tcagcgacgc cggctggtcc
     4621 gtggccgagt tggttgcgac ggccggccgc gacgcagcgc cacccgtcgc ggcccagcgt
     4681 ctgcatccag ttcgcaaacg gctcgtggct ggcgaacgct ccatggatga agaggagcag
     4741 cggccggtcg gccgtacctg cggtcctgag cgcggggaac cctgcaatat tcgaaggcga
     4801 aacctgcggc tggggcatgg cgtcctccgt ccgttcggct aaaactgtca aggagcttgc
     4861 ctatattggc aatgtagttt cctattttgt caagaagctt gcataatgag gaatgtggca
     4921 tcgtttcgcg cccgccgcga gcaggtcctg ttacggttgt tcttgcggat tacgcgggtc
     4981 atgaccctcg agacggtcga gcgcgtgcgc gcccttggaa tcacgcagat gcagccctcg
     5041 tttccgtggc ttctcggcaa ccttgatacc gagggcacac gcatcggtgc gctggcgcgg
     5101 cggatgggaa cttcgcgcca ggcggcaagc cagctgagca aggaaatcga ggctgctgga
     5161 ttggtcgaac gtcgtccgga cccgcacgac cggcgcggcg ttatcgtcag cttcaccccg
     5221 cacggccgca gcgtgctcgc aagtgccgtg gaggttatga ccgagatcga ggccgagtat
     5281 gccggcgtga tcagcgatca gggcatgacc cggctcaaac gcagccttaa gcggctgctc
     5341 gatcgcgtcg acaaatcagg cgagttcggc ctcgactgag cggcaatcgg acggcggggg
     5401 cgaattgcgc cgcgggcgcg gttgtgactc gtatcgaacg gccgtaaaag ggcgccgaat
     5461 tgcccgagac ttagccggag gaacgcatgt cggttcgcgt a
//
LOCUS       DATMQB010000103        10616 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_650127, whole genome shotgun sequence.
ACCESSION   DATMQB010000103 DATMQB010000000
VERSION     DATMQB010000103.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10616)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10616)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10616
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_650127"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            14..1267
                     /locus_tag="VNY79_03260"
     CDS             14..1267
                     /locus_tag="VNY79_03260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015316471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF763 domain-containing protein"
                     /protein_id="HWX71497.1"
                     /translation="MRRSGSADLPLHNGHVPKWLADRMTRLGAVISQAIVHHYGRDEL
                     LRRLAHPFWFQSFGAVMGMDWHSSGITTSVLGALKRGLAPLDRELGLYVCGGRGKHSR
                     RTPDELVAIGERVGFDGDSLATASRLVAKVDSAAVQDGFDLYLHGFVVAEDGGWVVVQ
                     QGMNGASRQARRYHWLSEGLKSFVEAPHAAIEGRAQGDIFNLTDRRAEASRRGQLELL
                     AALGPDGIARELAAIGAEDVKVQVQGTLPFLVMPEHHDVRTGDVHLRRLHGNLAAAAE
                     RGAADFPDLLLTPGVGARTVRALALVAEVVNGAPCRFSDPARFSLAHGGKDRHPFPVP
                     LKVYDETIRVLKSAVQRAKLGQDEQLAALQRLDEESRKLERAAKGPTFEGLLAEERAH
                     SHQYGGRSVFGWEPPVEPAADCRPA"
     gene            1462..3120
                     /locus_tag="VNY79_03265"
     CDS             1462..3120
                     /locus_tag="VNY79_03265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019862649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding dehydrogenase"
                     /protein_id="HWX71498.1"
                     /translation="MAYDADAIIVGAGLAGLVAAAELVEAGKRVIVLDQEPEQSLGGQ
                     AFWSLGGIFLVNSPEQRRMRIRDSHALALDDWMGTAAFDRDEDFWPRQWAEAYVAFAA
                     GEKRSWLHERGVRFFPVVGWAERGGHNAIGHGNSVPRFHLTWGTGPGVVAPFIQRMRE
                     GEKRGLVVFKFRHRVNELVKSGAVVDGVRGDILEPSNVGRGQKSSRQVVGGFELRAQA
                     VIVASGGIGASHELIRKNWPQRLGPAPKRMIAGVPDHVDRRMLAITAAAGGTIINPDR
                     MWHYVEGIKNWNPIWTAHAIRILPGPSSLWLDARGRRLPAPLYPGFDTLGTLKHIMET
                     GYDYSWFLLTQRIIEKEFALSGSEQNPDFTGKSWRKVLGRARGGVPGPVKAFMDKGED
                     FIVERELTTLVKRMNALAGGEPLLSVETIQREIIARDRQLDNPFCKDMQIMAIRAARR
                     YLGDRLIRTARPHRLLDPDAGPLIAVRLQVLTRKTLGGLQTDLDSRVLGSHGQPVQGL
                     YAAGEVAGFGGGGVHGYAALEGTFLGGCIFSGRAAGRAAARSVA"
     gene            complement(3156..4118)
                     /gene="meaB"
                     /locus_tag="VNY79_03270"
     CDS             complement(3156..4118)
                     /gene="meaB"
                     /locus_tag="VNY79_03270"
                     /inference="COORDINATES: protein motif:HMM:TIGR00750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016772 - transferase activity,
                     transferring phosphorus-containing groups [Evidence IEA];
                     GO_process: GO:0015819 - lysine transport [Evidence IEA];
                     GO_process: GO:0015822 - ornithine transport [Evidence
                     IEA];
                     GO_process: GO:1903826 - L-arginine transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HWX71499.1"
                     /translation="MSPSEPAQRGESRPTHDDFIDRLAAGDPSRLARCITLMERGGAA
                     ADLIYRRICPRVGRATVIGFTGPPGAGKSTLIDAYIAALRTRGHSVAVAAVDPSSPIS
                     GGAVLGDRMRMRRHAEDPGVFIRSVASHGHLGGLSESIHCIVDAMDAAGRDLIIIETV
                     GAGQSEIEVVEIADICVVVNAPNMGDEVQAMKAGILEIADVLEVNKADLPLAQRTTKQ
                     LTNMLELRRQNRDVPVLETVALTETGIDALHDAIMSRLAASAGDKRSRRERRMRRLIA
                     DCAGHIVRDLIRDAGDELADLVQAAASREIGVDAAARRALRTVR"
     gene            complement(4105..5787)
                     /locus_tag="VNY79_03275"
     CDS             complement(4105..5787)
                     /locus_tag="VNY79_03275"
                     /inference="COORDINATES: protein motif:HMM:NF013781.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA mutase large subunit family protein"
                     /protein_id="HWX71500.1"
                     /translation="MSKEAVQLSLPGFEQAHGRWRAEYGRQIGAERAIRNRSQIEIKP
                     LYTPRDWNGESFLETLGFPGQYPFSRGIYPTMHRGRTWTQRQLIGLGTPEDYNKRVRV
                     ILDAGATAISLLPCNSGFRGVDCDEVDPVLLGTCGTVINTTDHMDRALDGVPLGDISA
                     AMNDPSPFTLLAFTLAVAKRRGIPWTSITGTSNQSDYISHFIANQMFYRLSLPGARRV
                     LLDHIEFCRRHVPGWNPVSVVGQHMQQAGATPVETMAFTISTALQYAQDCIDRGMDID
                     VVLRRFTFFFDISISFFEEVAKFRAGRRIWARMARERLGAKEPASCRFKFHAQTSGVD
                     LTEQQPLNNIARVAVQAMAGIMSGLQSLHTDAYDEAITTPTEETARIAVATQNILREE
                     AHLCDVIDPLGGSYYVETLTDQMEREIGALIGKIDAAGGMYKAAEAGLVQSMIGTSAL
                     AFQQRVESGEEKVVGVNCYQNDNGPSLSRATERPDLARMAEHVARFKAYKEERSPSDV
                     RRALDALARAANSERENVFERIVEAAEAGITHGEIVGCLRKELGFGHPLVTV"
     gene            complement(5784..6233)
                     /locus_tag="VNY79_03280"
     CDS             complement(5784..6233)
                     /locus_tag="VNY79_03280"
                     /inference="COORDINATES: protein motif:HMM:TIGR00640.1"
                     /note="Presence of a B(12) (cobalamin)-binding domain
                     implies dependence on cobalamin itself, in one of its
                     several forms, or in some unusual lineages, dependence on
                     a cobalamin-like analog; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-dependent protein"
                     /protein_id="HWX71501.1"
                     /translation="MTAAALSPPARVLVTKIGLDGHDRGSRIVAAFLRDAGVEVIYTP
                     PWQSIAAVVKLAMEEDVDVIGISSLATDHLIVPRLTEALRAAGLGYVGVVVGGIVPED
                     ERPALIAAGVNAIFGPGSARDEIIEHVAALAARVREMKDAELEEIAP"
     gene            complement(6230..6844)
                     /locus_tag="VNY79_03285"
     CDS             complement(6230..6844)
                     /locus_tag="VNY79_03285"
                     /inference="COORDINATES: protein motif:HMM:NF036525.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HWX71502.1"
                     /translation="MDIEPVATTSAKRQPNRWPALLDAAAAQFAERGYHATSMRDLAA
                     ATAMTPGAIYFHVASKQALLLAVYEEGVQRILDRVEAAVAAEREPWARLEKAVVAHLE
                     SILDASAYARVVIRILPGDAPEIAAELKELRDRYEARLSRCFSAIPLPRERDATIARL
                     ALLGAMNWTPVWYHQGGKSVQAVARELLAPLRALAGVKALRGRK"
     gene            complement(7084..7719)
                     /locus_tag="VNY79_03290"
     CDS             complement(7084..7719)
                     /locus_tag="VNY79_03290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HWX71503.1"
                     /translation="MDVYFSPLACSLASRIVLYEAGADARFIEVDPKSKRTLDGDDYR
                     EIYPLGLVPLLRLDDGSLLRENAAILQYIAARYPHAELAPADAVERARLQQWLSFIGT
                     ELHKGLFIPLFDQKAPEGTHAHTLKKQEPRLKYLSSHLAGRDFLLDRFTVADAYLYTV
                     LNWTAPTRVDLAPFPAIQQYHQRLQKRPSVAKAFQEELALYKAELARHQAA"
     gene            7788..8474
                     /locus_tag="VNY79_03295"
     CDS             7788..8474
                     /locus_tag="VNY79_03295"
                     /inference="COORDINATES: protein motif:HMM:NF012655.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HWX71504.1"
                     /translation="MVQKKSSPQQGRRGRPRQYDPDSALARAAAAFWKNGYAGTSLDD
                     LAAATGMNRPSLYAAFGDKRDLYLKTLERYQQQSRALSAQLLADSATLREFLTRFYDG
                     ALELYRAGEADARGCFSISTAPAQATSDPAVHAFLSESIRGTDAFLADVIGNARDRGE
                     IAASGDPSALAQVATATLHTLAVRSRVGVPRHQLKALAAAAIDLICGTAPRQRPRPAG
                     KRGGNGPPAR"
     gene            9373..>10616
                     /locus_tag="VNY79_03300"
     CDS             9373..>10616
                     /locus_tag="VNY79_03300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018245886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HWX71505.1"
                     /translation="MRVGDFSVRMSGDQIGIMGKVADTFNEIVAANQRIAQQLERVGQ
                     VVGREGKTRQRVRFGFSEGAWGEMESSVNTLIDDLLWPTTEVTRAIAAVAQGDLLETV
                     QLDVDGRPLQGEFLRSAKIVNRMIKQLNVFTSEVTRVAREVGTEGKLGGQAQVREVSG
                     VWRELTESVNSMASNLTAQVRNIAEVTIAVANGDLSKKITVDVRGEILQLKEAINTMV
                     DQLNAFAGEVTRVAREVGTEGKLGGQAQVRGVAGTWKDLTDSVNSMASNLTGQVRNIA
                     DVATAIAGGDLSKKITVNVSGEILQLKETLNTMVDQLNAFAGEVTRVAREVGTEGRLG
                     GQANVLGVAGTWKDLTESVNSMASNLTAQVRNIADVTTAVANGDLSKKITVDVRGEIL
                     ELKDTINTMVDQLNAFAGEVTRV"
BASE COUNT         1794 a         3464 c         3579 g         1779 t
ORIGIN      
        1 gaccgcatag gcgatgcgaa gatcaggaag cgccgacctg ccgctgcaca acgggcacgt
       61 cccgaaatgg ctcgccgacc ggatgacgcg gctcggggcg gtgatcagcc aggcgatcgt
      121 gcaccactac gggcgggacg agctcctgcg ccggcttgcg catccgttct ggtttcaatc
      181 cttcggcgcg gtgatgggga tggactggca ttcctccggc attacgacga gcgtgctcgg
      241 cgccctcaag cgcgggctcg ctccgcttga tcgcgagctc ggcctctacg tctgcggcgg
      301 gcgcggcaag cattcgcggc gaacgccgga cgagctggtg gctatcggcg aacgcgtcgg
      361 ctttgacggc gacagccttg ccaccgccag ccggctagtc gcgaaggtcg acagcgctgc
      421 cgtgcaggac gggttcgatc tttacctcca tggattcgtg gtcgccgaag acggcggctg
      481 ggtcgtggtg cagcaaggaa tgaacggggc gagccgccag gctcgccgct atcactggct
      541 gtcggaagga ctgaaaagct tcgtcgaggc gccgcatgcc gcgatcgaag gccgggcgca
      601 aggcgacatc ttcaacctca ccgaccggcg ggccgaagcc tcgcggcgcg ggcagctcga
      661 gcttcttgcc gcgctcggtc ccgacggcat cgcccgcgaa ctcgccgcaa tcggggccga
      721 agatgtgaaa gttcaggtgc aagggacgtt gccgttcctc gtgatgccgg agcaccacga
      781 tgtgcggacg ggcgacgttc atctgcggcg cctccacggc aaccttgcgg cggcggccga
      841 gcgcggcgcc gccgattttc ccgatctcct gctcacgccc ggcgtcgggg cgcgaacggt
      901 acgcgcgctg gcgctagtcg ccgaggtcgt caacggcgcg ccgtgccggt tcagcgatcc
      961 ggcacgcttc tctctcgccc acggcggcaa ggaccggcat ccgttcccgg tccctctcaa
     1021 agtgtacgac gaaaccatcc gtgtccttaa atcggccgtg caacgcgcca agctcggcca
     1081 ggacgaacaa ctggcggcgc tgcaaaggct cgatgaggaa tcgcgcaagc tggaacgggc
     1141 ggcgaaaggc ccgacgttcg agggcctgct tgcggaggag cgcgcgcact ctcatcagta
     1201 tggcggccgc agcgttttcg gctgggagcc tcccgtcgaa cccgccgccg attgtcgccc
     1261 ggcataggcg cggccggaac gacgcgctcc gcgaacctgc gccagtcccg cctgagagtg
     1321 atttgggtgc ggacgcggca cttgttccat ccggtcggac acccgacaat tgagagcagc
     1381 gcattcgggc gtgagccgag gtttggcagt agcccggcgc gacggctccg gccgaaattt
     1441 tctgatcggg gaggggaagg catggcgtat gacgccgatg cgatcattgt cggagccggg
     1501 ctcgccggac tggttgccgc tgccgaactc gtcgaagccg gaaagcgggt catcgttctc
     1561 gatcaggagc ccgagcagtc gctaggcggc caggcattct ggtcgctcgg cgggatcttt
     1621 ctggtcaact cgcccgagca gcggcgcatg cgcatccgcg attcgcacgc actcgcgctc
     1681 gacgattgga tgggaacggc ggccttcgac cgcgacgagg atttctggcc gcggcaatgg
     1741 gcggaggcct acgtggcctt cgccgccggc gagaagcgct catggctgca cgagcgcggc
     1801 gtccgcttct tcccagtcgt cggctgggca gagcgcggcg ggcacaacgc catcggccac
     1861 ggcaattcgg tgccgcgctt ccatctcacc tggggaaccg gcccgggagt cgtcgcgccc
     1921 ttcattcagc gcatgcgcga gggggaaaag cggggactcg tcgtcttcaa gttccgtcat
     1981 cgggtcaacg aactggtaaa gtccggcgcc gtcgtcgacg gtgtgcgcgg cgacatcctc
     2041 gaaccgtcga acgtcgggcg cggccagaaa agttcgcgcc aggtggtcgg cggcttcgag
     2101 ctcagggcgc aggcggtcat cgtcgcctcc ggcggcatcg gcgccagtca tgagctgata
     2161 cgcaagaact ggccgcagcg tctcggaccg gcgcccaagc ggatgatcgc cggcgtcccc
     2221 gatcacgtcg accgccgcat gctggcgatc accgcggccg ccggcggcac gatcatcaac
     2281 ccagaccgca tgtggcacta tgtcgagggc atcaaaaact ggaatccgat ctggactgcg
     2341 cacgccatcc gcatcctgcc cggtccctcg tcgctctggc ttgacgcgcg cggccggcgg
     2401 ctgccggcgc ccctttaccc cggcttcgac acgctcggca ccctcaagca catcatggag
     2461 accggctacg attattcctg gttcttgctc actcaacgga tcatcgagaa ggagttcgcg
     2521 ctgtccggtt cggagcagaa tccggatttc accggcaaga gctggcggaa agttctgggc
     2581 cgggcacgcg gcggcgttcc cggcccggtc aaggccttca tggacaaggg ggaagatttc
     2641 atcgtcgaac gcgagctcac gacgctggtg aagcgcatga acgcactcgc cggcggcgaa
     2701 cccctgctga gcgtcgagac cattcagcgc gagatcatcg cccgcgatcg tcagctcgac
     2761 aatccgttct gcaaggacat gcagatcatg gccattcgcg cggcgcgccg ctatctcggt
     2821 gaccggctca tccgcaccgc ccggccgcat cgtctgctcg atcccgacgc gggtccgctg
     2881 attgcggttc gcctccaggt cctgacccgc aagacgctgg gcggcctgca gaccgatctc
     2941 gacagccgcg tgctgggctc ccacggtcaa ccggtgcagg ggctttacgc cgccggagag
     3001 gttgcgggat tcggcggcgg cggcgtgcac ggttacgcgg cgctggaggg caccttcctc
     3061 ggcggctgca ttttctcggg gcgggcggcg gggagggcgg cagcgcggag cgtggcttga
     3121 gcttcgccat cccccctcgg cgatttcggc agcgctcagc gaaccgtccg cagcgcgcgc
     3181 cgggccgccg catcaacgcc gatctccctc gacgcggcgg cttgaaccag gtcggccaac
     3241 tcgtcgcccg catcgcgaat gagatcgcgg acgatgtggc cggcgcagtc ggcgatgagc
     3301 cgacgcatgc gccgctcgcg cctgctgcgc ttgtcgccgg cgctggcggc aaggcggctc
     3361 atgatcgcgt cgtgcagcgc gtctattccg gtctcggtca acgcgacagt ctcgagaacc
     3421 gggacatcgc gattctgccg gcgcagctcg agcatgttgg tgagctgctt ggtggtgcgt
     3481 tgcgcaagcg gcaagtcggc cttgttgacc tccagcacat cggcgatttc gaggatgccg
     3541 gccttcatcg cctgcacctc atcgcccatg ttgggcgcat tcaccaccac gcatatatcg
     3601 gcgatctcga cgacctcgat ttccgactgg ccggcgccga cggtctcgat gatgatgaga
     3661 tcgcggccgg ccgcatccat ggcatcgacg atgcagtgga tgctttccga caggccgccg
     3721 agatggccgt gcgatgccac cgagcggatg aacacgccgg gatcctcggc gtgacgccgc
     3781 atccgcatgc ggtcgccgag aacggccccg ccggagatcg ggcttgacgg atcgacggcg
     3841 gcgacggcga cgctgtggcc gcgggtgcgc aaggcggcga tataggcgtc gatcaatgtc
     3901 gatttgccgg ccccgggcgg accggtaaag ccgatcaccg tcgcgcggcc gacgcgcgga
     3961 cagatgcgcc gataaatgag atccgcggcg gcgccgccgc gctccatcag ggtgatgcag
     4021 cgtgccagcc tcgacggatc gcccgctgcg agccggtcga tgaaatcgtc atgcgtcggg
     4081 cgggattcgc cgcgctgcgc tggctcagac ggtgacaagg ggatggccaa agccgagctc
     4141 tttgcgcaag cagccgacga tctcgccgtg ggtgatgcct gcttccgcgg cctcgacgat
     4201 ccgctcgaac acgttttcgc gctcgctgtt ggcggcccgt gcgagcgcgt cgagcgcgcg
     4261 gcgcacgtcg cttgggcttc gctcctcctt gtaggccttg aagcgtgcca cgtgctccgc
     4321 catgcgagca aggtcgggcc gctcggttgc gcggctcaag ctcggtccgt tgtcgttctg
     4381 atagcaattg accccgacta ccttctcctc gccgctttcc acccgttgct ggaaggcgag
     4441 cgccgacgtg ccgatcatgg attggacgag gccggcttcg gcagccttgt acatgccgcc
     4501 ggccgcatcg atcttgccga tcaacgcccc gatctcccgt tccatctggt cggtcagcgt
     4561 ctcgacgtag taggagccgc cgagcgggtc gatgacgtcg cacaggtgcg cctcctcgcg
     4621 caggatgttc tgcgtggcca ccgcgatgcg cgcggtctcc tcggtcggcg tggtgatcgc
     4681 ttcgtcgtag gcgtcggtgt gcaaggattg cagtccgctc atgatgccag ccatggcctg
     4741 caccgcgacg cgcgcgatat tgttgagcgg ctgctgctcg gtgagatcga caccggaggt
     4801 ctgggcgtgg aatttgaaac ggcacgaggc cggctccttg gcgccgagcc gttcgcgcgc
     4861 catccgcgcc cagatgcgcc ggccggcgcg gaatttggcg acctcctcga agaagctgat
     4921 cgatatgtcg aagaagaaag tgaaacgccg cagcacgaca tcgatgtcca tgccgcgatc
     4981 gatgcagtct tgcgcatatt ggagcgcggt cgagatggtg aaggccatgg tctcgaccgg
     5041 cgtcgccccg gcctgctgca tgtgctgacc gacgaccgac accggattcc agcccggcac
     5101 gtgcctgcgg cagaactcga tatggtcgag caggacgcgc cgcgcgccgg gcagcgacag
     5161 ccggtagaac atctgattgg cgatgaaatg cgagatgtag tcgctctggt tcgaggtgcc
     5221 ggtgatcgac gtccacggaa tgccgcgccg cttggcgacg gcgagcgtga aggcgagcaa
     5281 cgtgaacggc gacggatcgt tcatcgcggc ggagatgtcg ccgagcggca cgccgtcgag
     5341 cgcccggtcc atgtgatcgg tggtgttgat cacggtgccg caggtgccga gcagaaccgg
     5401 atcgacctcg tcgcagtcca cgccgcgaaa gccggaattg cacggcaaga ggctgatcgc
     5461 ggtggcgccg gcgtcgagaa taacgcgcac gcgcttgttg tagtcttcgg gcgtgcccag
     5521 gccgatcaac tggcgttgcg tccaggtgcg gccgcggtgc atggtcggat agatgccgcg
     5581 gctgaagggg tattggccgg gaaagccgag ggtctcgaga aagctctcgc cgttccagtc
     5641 gcgcggcgtg tacagcggct tgatctcgat ctgcgagcgg ttcctgatcg cgcgctcggc
     5701 gccgatctgc cgcccatact cggcgcgcca gcggccgtgc gcctgctcga acccgggaag
     5761 cgagagttga acggcttcct tgctcatggg gcgatctcct ctagttccgc gtctttcatt
     5821 tcgcgcactc tggcggcgag cgcggcgaca tgctcgatga tttcatcgcg ggcgctgccc
     5881 ggtccgaaaa tcgcgttcac tcccgcggcg atgagcgccg ggcgctcgtc ttccggtacg
     5941 atgccgccga ccaccacgcc aacgtagccg aggccggccg cgcgcagcgc ctccgtcagc
     6001 ctcggcacga tgaggtgatc ggttgccaag gagctgatgc cgatgacgtc cacatcctct
     6061 tccatcgcca gcttgaccac ggcggcaatc gactgccacg gcggcgtata gatgacttcc
     6121 acgccggcat cgcgcaggaa tgccgcgacg atccggctgc cgcggtcgtg cccgtcaagt
     6181 ccgatcttgg tgaccaggac gcgcgcgggc ggcgacaggg cggcggcggt catttgcggc
     6241 cccgcaaggc cttgacgccg gcaagcgctc gcagcggcgc gagcaattcc cgcgccacgg
     6301 cttgcaccga tttgccgccc tgatggtacc agaccggcgt ccaattcatg gcgccgagca
     6361 aagcgaggcg cgcaatggtg gcatcgcgct cgcgcggcag ggggatcgcc gagaaacagc
     6421 ggctcagccg cgcctcgtag cggtcgcgca gttccttgag ctcagcggcg atctccggag
     6481 cgtcgcccgg caggatgcgg atgacgacgc gcgcgtaggc gctggcatcg aggatggact
     6541 ctagatgcgc gacgacggcc ttctccagcc gcgcccacgg ctcccgttct gccgccacgg
     6601 ctgcttcgac ccgatcgagg atgcgctgga cgccttcttc gtagacggcg agcagcagcg
     6661 cctgcttgct ggcgacgtga aaatagatcg cgcccggcgt catggcggtt gccgccgcga
     6721 ggtcgcgcat gctggtggcg tgatagccgc gctcggcgaa ctgggctgcg gcggcgtcga
     6781 gcagggccgg ccaccgattg ggttgacgct tcgcgctggt tgtcgccaca ggctcgatgt
     6841 ccacgccgga tcgccaatcg gtcgtttagc accaattggc tggcgggaga agctttcatc
     6901 tggacacgcg cgctggtatt gctggcctgt ctaacccgct cgcagtgccg ctggctgaac
     6961 ggccgtttag gagcttttgg gcaagaggaa gacctaacgg ggcacgcgtc ggcggaatga
     7021 ctgtgccggc atgccgtcgc gggcgggcgc ggaacgcacc caccccgggc ggctaagccg
     7081 ggctcacgcc gcctggtgac gcgccagctc ggccttgtac agcgccagct cttcctggaa
     7141 ggccttggcg acgctcggac gtttttgcag acgctggtgg tattgctgga tcgccgggaa
     7201 gggcgcgaga tcgacgcgtg tcggcgccgt ccagttgagc acggtgtaga ggtaggcgtc
     7261 cgccaccgtg aaacggtcaa gcagaaaatc acgaccggcg agatggctgc tgagatactt
     7321 cagccgcggc tcctgcttct tcagcgtgtg cgcatgggtg ccctccggcg ccttttgatc
     7381 gaacagcggg atgaacaggc ccttgtgcaa ttcggtgccg ataaaggaga gccattgctg
     7441 cagccgcgcc cgttcgacgg catcggccgg cgcaagctcg gcgtgcggat agcgggcggc
     7501 gatgtattgc aggattgcag cgttctccct cagcagcgag ccgtcatcga ggcgcagcag
     7561 cgggaccagc ccaagcggat agatttcgcg gtagtcgtcg ccgtcgagcg tccgcttgct
     7621 cttggggtcg acctcgatga aacgggcgtc ggcgccggcc tcgtagagca ctatccggct
     7681 cgccagcgaa caggccagcg gcgagaaata gacatccatg gcagcacttc ctttgctttt
     7741 ttgtactgtc tcgcataaat tagcgggcgt caaggattac ttgcgaaatg gtacaaaaaa
     7801 aatcgagccc gcagcagggc cgccgcggtc ggccgcgcca atacgatccc gacagcgcgc
     7861 tcgcccgggc cgcggcggca ttctggaaga atggctatgc ggggacctcg ctcgacgacc
     7921 tggccgccgc gaccggcatg aaccggccga gtctctatgc cgccttcggc gacaagcgcg
     7981 acctctatct caagacgctc gaacgatatc agcagcaatc ccgcgccttg tcggcccaac
     8041 tccttgccga cagcgcgacg ttgcgggagt ttttgacccg cttctacgac ggcgcgctcg
     8101 aactttatcg ggccggagag gccgacgcgc gcgggtgctt ttccatttcg accgctccgg
     8161 cgcaggctac cagcgacccg gcggtgcacg cgttcctctc cgagagcatc cgcggtaccg
     8221 acgcatttct ggccgacgtc atcggcaacg cgcgcgaccg cggggagatc gcggcgagcg
     8281 gtgacccttc ggcgctggcg caagtcgcga ccgcgaccct gcataccctg gctgtgcgtt
     8341 cgcgcgtcgg ggttccgcgg caccaactca aggcgctcgc cgcggccgcc atcgacctga
     8401 tttgtggaac tgccccccgg caacggcccc ggccggcggg caagcgcggc gggaacggtc
     8461 cgccagcgag gtagcacgtc ccggctgggc gcaactgcca gatcgcgcgc ggcaccaact
     8521 caaggtgctc gccgcggggc cgccatcgac ctgatttgtg gagctacccc ggggcaacag
     8581 cctcgctcgg tgggtaagcg cggcgggaag cgtcagccag cgcggtagca cgtcccggct
     8641 gagcgcaacg gccatatcgc cgaagcgaca cccacgaccg aagcggatga agtggtgccg
     8701 gcaaaagcaa agccgctggc cgctagggca aattctattg tagcaccata tatttatagg
     8761 acagcacctg gtcccattca ggcaactttt ttggcagcaa gtcggcgccg ccctgttccg
     8821 gtcgagccca tgtcggcgat cttcagccag ttgactgtct ccaaaaagcg ccacgcaaaa
     8881 attttttgat cgacgcggtc ttgagccgga accttccatg gcgggaggcg ttgcgcgtta
     8941 cggcttagga ggtgtccttt ggtgaggggg caatctcagt ccgcactggt gacggcgcgg
     9001 tggatgacgg cgcggtggaa caagacatcg cgggcggaag gttccgcgcg gctcattggc
     9061 gcgcgtgccg tagtgttcac cctcgctcaa ccaggttccc tcatcaaaac gtccgtctgg
     9121 ccgcaacggg ctagcaaacg ccccattcga cagccattgt ccacgtcacg tcagatcccg
     9181 tccgcgccgc acgatgccga cggcgccgca taggcgaggg atcaggagat tcccatggaa
     9241 cagacccccg acgtcgccgg cgccgcgaac accaatggtt cggccgccgg ctcgctcgac
     9301 caggcgcgct tgccggaggt caactggagc gaaaacgggg aacttcgcca attgctgcat
     9361 gccctgcagt ccatgcgcgt gggggatttt tccgtgcgca tgtccggcga ccagatcggc
     9421 atcatgggca aggttgccga caccttcaac gaaatcgtgg ccgccaacca gcgcatcgcc
     9481 cagcagcttg aacgtgtcgg tcaggtcgtg ggccgtgagg gcaagactcg ccagcgtgtg
     9541 cgtttcggct tctccgaggg cgcctggggc gagatggaat cttcggtcaa cacgctcatc
     9601 gacgatctgc tgtggccgac caccgaagta acgcgcgcca tcgccgcggt ggcgcagggc
     9661 gatctcctgg agaccgtgca gctcgacgtc gatggccgac cgctgcaggg cgaattcctg
     9721 cgctcggcca agatcgtcaa ccgcatgatc aagcagctca acgtgttcac ctcggaagtg
     9781 acgcgcgtcg cgcgggaggt cggcaccgaa ggcaagctcg gcggccaggc tcaggtgcgc
     9841 gaggtgtccg gcgtgtggcg cgagctgacc gagagcgtca actccatggc ctcgaacctc
     9901 accgcccagg tgcgcaacat cgccgaggtg accatcgccg tcgccaatgg cgacttgtcg
     9961 aagaagatca ccgtcgacgt ccgcggcgag atcctgcagc tcaaagaagc catcaacacc
    10021 atggtggacc agctcaacgc ctttgcaggc gaagtcacgc gcgtggcgcg cgaggtcggc
    10081 accgaaggca agctcggcgg acaggcgcag gtgcgcggtg tcgccggaac gtggaaagat
    10141 ttaacggact ccgtcaactc gatggcgtcg aacctcaccg gccaggtccg caacatcgcc
    10201 gatgtggcga ccgcgatcgc cggcggcgac ctttcgaaga aaatcaccgt gaacgtgtcg
    10261 ggcgaaatcc ttcaactgaa ggaaacgctc aacaccatgg tcgaccagct caacgcgttc
    10321 gccggcgagg tgacgcgcgt ggcgcgcgaa gtcggcaccg agggtcgcct cggcggtcag
    10381 gccaacgtgc tcggcgtcgc cggcacctgg aaggacttga ccgagagcgt caactcgatg
    10441 gcctcgaacc tgaccgcgca ggtccgcaac atcgccgacg tgaccaccgc ggtcgccaat
    10501 ggcgacctgt ccaagaagat caccgtggac gtacgcggcg aaattctgga gctgaaggac
    10561 accatcaaca ccatggtcga ccagctcaac gcgtttgccg gcgaagtcac gcgtgt
//
LOCUS       DATMQB010000104        11470 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3130179, whole genome shotgun sequence.
ACCESSION   DATMQB010000104 DATMQB010000000
VERSION     DATMQB010000104.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11470)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11470)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11470
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3130179"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..582)
                     /locus_tag="VNY79_03305"
     CDS             complement(<1..582)
                     /locus_tag="VNY79_03305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HWX71506.1"
                     /translation="MPLAIKALFFDVFGTLVDWRTSVARETQALLAPRGYALDWLAMA
                     DAWRGEYQGAMEEVRAGRIPFCKLDVLHRRNLERILPRFGVASLGDDVLHDLNLAWHR
                     LDAWSEVPPALARLKRRYLLAPVSNGNISLMVDLARRNDFPWDAVLGAEIAGDYKPKP
                     GVYLAAAEAFDLAAHECMMVAAHSSDLKAAAAPG"
     gene            661..1293
                     /locus_tag="VNY79_03310"
     CDS             661..1293
                     /locus_tag="VNY79_03310"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HWX71507.1"
                     /translation="MEAEQTAGSKMSDFERWEKRYGAPGYLFGTAPNAFLAAQADRLR
                     GRKTALSVADGEGRNGVWLAEQGLDVLAIDYSPTALAKAETLARERGVRLHTEVADLT
                     RWHWPRAAFDVIAAIFAHFAGAERDAFFANLTNALKPGGLLLMQSYRPEQLAYRTGGP
                     PDAERMVTRALLEQAFGDWAEFDIREHDSVIDEGTGHVGMSALIDLVAIR"
     gene            1454..2014
                     /locus_tag="VNY79_03315"
     CDS             1454..2014
                     /locus_tag="VNY79_03315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HWX71508.1"
                     /translation="MPMLALDTLTQEQQALVAAIKSGPRGRFSNDGPFAVYLQAPGFG
                     QLAQQLGAHLRFGTSVPPRLAEVAILFTAQYWKAQYEWAAHAVFAGRHGVKEAAIRDL
                     QAGRAPKSAPRDEQAIYAFVKELYATRRVSNATYARVHKLLGDAGTVELVGMLGYYVM
                     VSMILDAFRMPAPEGTPPPFREPGSK"
     gene            complement(2172..2732)
                     /locus_tag="VNY79_03320"
     CDS             complement(2172..2732)
                     /locus_tag="VNY79_03320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016531 - copper chaperone activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone PCu(A)C"
                     /protein_id="HWX71509.1"
                     /translation="MKKKTVARGTICNGLAAALAVVLGQPSVPPAEAGDYDVGAIHIA
                     DTWARATPKGASAAAGYMTVTNNGTTPDRLSCVSSDASAKCQIHSMTMENGVMKMRPV
                     EGGLDVKPGESVMLKPAGVHMMFLDLKHPLEPGKTVAATLQFEKAGTVQVEFPIAAIG
                     APAPGAATGGGTMMQGGSMMQVKPQR"
     gene            complement(2940..3764)
                     /locus_tag="VNY79_03325"
     CDS             complement(2940..3764)
                     /locus_tag="VNY79_03325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71510.1"
                     /translation="MRNMRRLAAIGVLSVVMVAGFGTTPGMAQSRAHVYLLRGLMNIF
                     SLGMDTLAEKIQHRGIYATVHNYSEWQTLADHAAAAYHAGTEGPIIIIGHSLGADAVM
                     EMSAYLGRKGVPVALAVPFDGTQSFATPSNVARVLNLTHADYGRVYRGAGFHGSISNV
                     DVSSDRNIDHLNIDKSARLHAQVIGAILAVVGNGNGNQKPGPAANDHRAPRSAATPDS
                     GNDGATKPGDSKRIPAKPADGATNSKDAVKPLADGGTPVITGPEKSGSAGAASSTR"
     gene            complement(3946..4530)
                     /locus_tag="VNY79_03330"
     CDS             complement(3946..4530)
                     /locus_tag="VNY79_03330"
                     /EC_number="2.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004671 - protein C-terminal
                     S-isoprenylcysteine carboxyl O-methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-S-isoprenylcysteine O-methyltransferase"
                     /protein_id="HWX71511.1"
                     /translation="MTATISKFVWLGFALLWSVLRLRPGRRSRKTAVRYSGRDVREIV
                     LLGCSLTGLGIVPFIYVVTGFPRFANYPFTPVQAYLGIAVFVAVLWLFYRTHHDLGAN
                     WSVSLDLRERHTLVTTGVYARIRHPMYTGFWLMALAQVLLLPNWIAGPAGFVGFGALF
                     FGRVGREERMMINAFGEEYRSYMQRTARVVPWIY"
     gene            complement(4527..5762)
                     /locus_tag="VNY79_03335"
     CDS             complement(4527..5762)
                     /locus_tag="VNY79_03335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71512.1"
                     /translation="MPPALVRKRCFVQMIGYEPVGAEHHHRRFVREMARFQKAWNVSG
                     SVSPLSVSADGAVANWTVETSGPNWRVATDYHYFRWDDFVSADAQESDWWRFPLGVAA
                     LIEFILTGTATKYFVVAWRYGGFFLSPLIYILGMIWLSIGLTRLVVGHSGLPYSLFWA
                     PLLAFALFVALRLIFGQRLFIRYALDDWYFARDFIHRVRPGIEERLDRFAAELVRIAR
                     ETDADEIIVDGHSLGAPLSLVVVDRALKLDPELSRRGRPLHLISSGSSLLKVALHPAA
                     GWLREAVARVATAPIYWVEFQALVDIINVYKVDPVVALGLATTGKPIIKIMRIRAMVE
                     EATYRGFHLNFLRIHRQAMMGNERRYYYDYYMLCCGPIPLAERVADGDAAVAAFTGEG
                     ALTAVWQAAAPAGATEPAP"
     gene            6049..6330
                     /locus_tag="VNY79_03340"
     CDS             6049..6330
                     /locus_tag="VNY79_03340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HWX71513.1"
                     /translation="MSTTFDKVAEIIAETCDIPRENIKPESHAINDLEIDSLDFLDIA
                     FAIDKAFGIKLPLEQWTQEVNDGKATTDQYFVLKNLSERIDELIAAKGA"
     gene            6341..6811
                     /locus_tag="VNY79_03345"
     CDS             6341..6811
                     /locus_tag="VNY79_03345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-hydroxyacyl-ACP dehydratase"
                     /protein_id="HWX71514.1"
                     /translation="MRLEYFQMIDRFVEVNIGERRTRSICTVPKESTVFEGHFPGYPL
                     MPGVLLIECMAQTTGWLVSALTGFTGLPALAGVKEGKIRAAVFPGDELEFEGKVIHEG
                     SGYAVGEAKGWCKGAPVCDATLTYRIIPYPSPELRAGLWDWAERINFPAKEFVK"
     gene            6808..7995
                     /locus_tag="VNY79_03350"
     CDS             6808..7995
                     /locus_tag="VNY79_03350"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HWX71515.1"
                     /translation="MTARREVWITGVGLLTCLGEGLESVWSHLERGDPPPYDDKSFAP
                     YVVHPLAPMSFDKQIPKKSDQRQMETWQRVGVYTAGLALSDAGIAGKPDLLDHTDMII
                     DAGGGERDIAVDTAILSGMRKVAEPAAFLNERLMRDLRPTLFLAQLPNLLAGNISLVH
                     GVVGSSRTFMGEEGAGVDAVRVAQARIAAGQSELTLVGGSYHGPRWDVLFSFELTNSA
                     LKGKFAPVWDRGPQGGIAFATMGAFLVLESREHAQARGARPRGRISEVYSDRNLRKPG
                     DIEASLRRQFAAVAPRVEHAHAAVISGASGLEPATSAELSVLKEFGLPVRNAGTYIGH
                     GVDTQFAANIGIASAVLEHGKLFAPAGSGDSGATPPSLSQVVVTSVGNWRGEGLALVT
                     RAE"
     gene            8019..9293
                     /locus_tag="VNY79_03355"
     CDS             8019..9293
                     /locus_tag="VNY79_03355"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase"
                     /protein_id="HWX71516.1"
                     /translation="MTRDKAGRQVVAITGMGVVTSLGVGKSDNWAKLTAGASGIRRIS
                     RFPLDSMRTTIAGTANDVYKDYMPPAELSKRVALLAGEEAIAESGIGGKGHFPGPLFI
                     ALPPLEIEWHYRVQVAETAAPTGEAGYPDLVRVAREPQFAPISNTLRYGIIGEHVAAH
                     FGTEGSPISLTTACASGATAIQLGVEAIRRGECSAALAIGADGSLTPESLVRFSLLSA
                     LSTQNDPPEQASKPFSKNRDGFVLAEGGGALVLEDLDYARARGARVLGILEGCGEKSD
                     SFHRTRSSPDGKPIIACMRNALADAGVGAEDVDYINAHGTSTPENDKMEHLGVSAVFG
                     ERIRGIPISSNKSMIGHTLTAAGAVEAVFSLLTLEHQRIPPTINHNVPDPAILLDVVP
                     NVARDARVTRVISNSFGFGGQNVCLVMTREPA"
     gene            9377..10426
                     /locus_tag="VNY79_03360"
     CDS             9377..10426
                     /locus_tag="VNY79_03360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HWX71517.1"
                     /translation="MRALSLVGDRKIELVEIAAPAAPAVGEVQIAIKAIGLNHIDVWG
                     WRGMAFAKRKLPLIVGVEAAGEIVAVGPSPAPAATAASSEAFKVGDPVVAYGGLTCGT
                     CKACREGRDNLCENVAGIMGFHVDGFARDRLNMPARLAVPVPAGVSFRDAACAPVAFS
                     TVQHMLFDNAKLEPGETILVQAGGSGIGTAAIKMAKAIGCTVITTVGDDEKAAKAKAL
                     GADHVINYRTERFEGVVRKLTAKKGVDVAFEHVGPDTFNGSLLCLKRGGRLVTCGSTS
                     GQSTTINLFQLYLQQYRIFGSFGASIRNIGESLAKMASGLTPVIDTEVALADFERGLA
                     RLESRQVFGKIIVNF"
     gene            10515..11444
                     /locus_tag="VNY79_03365"
     CDS             10515..11444
                     /locus_tag="VNY79_03365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipid A biosynthesis lauroyl acyltransferase"
                     /protein_id="HWX71518.1"
                     /translation="MLGEPFKALLDGAVGASAVGLVRAVKLMDRRSTADFAGALVRKT
                     GPLFKEHRLGRENLRAAFPEKSDAEIEKILAGVWDNLGRIAIEFAHLDEFHPAGLGPA
                     SADVITYPPDTQERGERLMKTGKATIGFAAHLANWELPALGAKLMGIKSAVLYRRPNI
                     TSISNAIVRLRAPLMGDLIPTGLDAPVKLARLLQSGVHVGMLVDQHYTRGIEVTFFGR
                     PCKVNPLIALLARQTECAIHGMRVVRQPDGNSFRGEITDAIEPPRDAEGRVDIRGTMQ
                     AITSVVEGWVREYPEQWLWLHRRWRDEKADTRW"
BASE COUNT         1996 a         3849 c         3764 g         1861 t
ORIGIN      
        1 gcccggcgca gccgcagcct tgagatcgga gctgtgcgcg gcgaccatca tgcattcgtg
       61 cgcggcgaga tcgaaggctt cggcggcggc gagatagacg ccgggcttgg gcttgtagtc
      121 gccggcgatc tcggcgccga gaaccgcgtc ccagggaaaa tcgttgcgcc gcgcgagatc
      181 gaccatcagc gaaatgttgc cgtttgatac cggcgccaag agatagcggc gcttgaggcg
      241 ggcgagagca ggcggcacct cggaccaggc atccagccgg tgccaggcga ggttgagatc
      301 gtgcagcaca tcatcgccga gcgaagcgac gccgaagcgc gggagaatgc gctcgaggtt
      361 gcgccggtgc agcacgtcga gcttgcagaa tgggatgcgg ccggcgcgca cctcttccat
      421 ggcgccctga tactcgccgc gccaggcgtc cgccatggcc agccagtcga gcgcgtagcc
      481 acgtggcgcg agcaacgctt gcgtctcgcg cgccaccgag gtgcgccaat cgaccagcgt
      541 gccgaacaca tcgaagaaga gggcttttat cgcgagcggc atggctgcac ctggcacaat
      601 cctatatcaa tcaatcgatc cgcgacgacc gggcgcgagg gccccaatga cggatgaggc
      661 ttggaggcgg agcaaaccgc gggcagcaag atgtcggatt tcgagcgctg ggaaaagcgc
      721 tatggcgccc ccggctatct gtttggcacg gcgccgaacg cgttccttgc ggcgcaggcc
      781 gaccgcctcc gcgggcgcaa gacggcgctt tcggtggcgg acggcgaagg ccgcaatggg
      841 gtgtggctcg ccgagcaggg gctcgacgtg ctcgccatcg actattcgcc gacggcgctc
      901 gccaaggcgg aaacgctggc gcgggagcgc ggcgtacggc tgcacaccga agtcgccgac
      961 ctgacccgct ggcattggcc gcgcgccgcc ttcgacgtga tcgcggcgat cttcgcgcac
     1021 ttcgccggtg ccgagcggga cgcgtttttc gccaacctca cgaacgcgct taagcccggc
     1081 gggctcctgc tcatgcaaag ctatcggccc gagcagctcg cctatcggac cggcgggccg
     1141 cctgacgcgg agcgcatggt cacgcgcgcg cttctcgaac aggcgttcgg cgactgggcc
     1201 gaattcgata tccgcgagca tgacagcgtc atcgacgaag gcaccgggca cgtcggcatg
     1261 tcggccctga tcgaccttgt cgccatcagg taggcagggc ggctgtcagc aacgcgcagt
     1321 cctccatagt gcgccgccta gcggcggggt atctttgcca cgccgcccca ggggcctgca
     1381 ggaggaacac atgcccaaat cgccgtcacc ccgctctcgc gcgaaaggag cgccgcgggc
     1441 gccctcccct cgcgtgccca tgctcgccct cgacaccctg acgcaggagc agcaggcgct
     1501 ggtggcggcg atcaaatccg ggccgcgcgg ccgtttcagc aatgacggcc cgttcgcggt
     1561 ctatctgcag gcgcccggct tcggccagtt ggcgcagcag ctcggcgcgc atctgcgctt
     1621 cggcaccagc gtgccgccgc ggctcgccga ggtcgccatc ctgttcaccg cgcaatactg
     1681 gaaggcgcag tacgagtggg cggcgcacgc ggtgtttgcc ggacggcatg gcgtgaagga
     1741 agcggccatc cgcgatcttc aggccggccg cgcgccgaaa tcggcgccgc gcgacgagca
     1801 ggcgatctac gccttcgtca aggagcttta cgccacgcgg cgggtgagca acgccaccta
     1861 tgcccgcgtg cacaaattgc tcggcgatgc gggcacggtc gagctcgtgg gcatgctcgg
     1921 ctattacgtc atggtgtcga tgatcctcga cgccttccgc atgccggcgc cggaaggaac
     1981 gccgccgccg ttccgcgagc ctgggagcaa atagcccgat cggcagcgct cgccgccatt
     2041 cgtcgccgca agagcgcggg cgttaggcag aagatcgcga acctttgctg cggcccgaag
     2101 cccggaccgc aatcgctcaa gttgcagcga tatgctcgct tcttctgcag ccgctcttgc
     2161 gcatcggtgc gctagcgctg cggcttcacc tgcatcatgc tgccgccttg catcatcgtg
     2221 ccgccgcccg tcgccgcgcc gggtgccggc gccccgatcg cggcgatcgg aaattccacc
     2281 tggactgtcc cggccttctc gaattgcagc gtcgccgcaa cggtcttgcc cggctccagt
     2341 ggatgtttga gatcgagaaa catcatgtgt acgcccgccg gcttgagcat gacgctctct
     2401 cccggcttga cgtcgagccc cccctctacc ggccgcattt tcatgacgcc gttttccatg
     2461 gtcatgctgt ggatctggca tttggcactc gcgtcgctcg aaacacaact caggcgatca
     2521 ggcgttgtgc cgttgttggt gaccgtcatg tagccagccg cggcgcttgc gcccttcggc
     2581 gtcgcccgtg cccaggtgtc ggcgatgtgg atcgcgccga cgtcgtagtc gcccgcctcg
     2641 gccggtggga ccgacggttg acccaggacg acggcaagcg cggccgcgag gccgttgcaa
     2701 atggtgccgc gagcaacggt cttcttcttc atcgaatcgc tccgtgccga aacggcggac
     2761 cggacgcgcc gcgcccgacg ctctcgcacg cagtgccgat cgcatcaagc gcggtgtatg
     2821 gccgcatcgt tctcggcaga ttttgggatc gccgccggcg agtcggagcg ggcgatagcg
     2881 cgaccgctcg atccggcatc gaacgatgcc ggcatgagcc aagccccgga cttgcggcgt
     2941 taccgcgtgc tcgaggccgc gccggcgctg ccagactttt cgggcccggt gatcaccggc
     3001 gtgccgccat cggccagcgg cttcacggcg tccttcgagt tcgtagcccc atcggcgggc
     3061 ttggccggga tccgcttcga atctcccggc ttggtggcgc cgtcgttccc cgagtcaggc
     3121 gtggcggcgg agcggggagc gcggtgatca ttcgccgcgg gccccggctt ctgatttccg
     3181 ttgccgttgc ccacgaccgc gagaatggcg ccgatcactt gggcgtgcag ccgcgccgat
     3241 ttgtcgatgt tgagatggtc gatgttgcga tcgctgctca cgtcgacgtt ggatatcgag
     3301 ccgtggaagc cggccccgcg atacacgcgg ccgtagtcgg catgggtcag gttgagcacg
     3361 cgggcgacat tgctcggcgt agcaaaggat tgtgtaccgt cgaacggaac cgcgagcgcc
     3421 actggaacgc ctttcctgcc gaggtaggcg gacatctcca tgacggcgtc ggcgccgagc
     3481 gaatgcccga tgatgatgat cggcccctcg gtgccggcgt gataggcggc cgcagcgtgg
     3541 tcggcgagcg tctgccactc cgaatagttg tggaccgtcg cgtagatgcc gcggtgctga
     3601 atcttctccg cgagagtatc catccccagc gagaaaatgt tcatcagccc gcggagcagg
     3661 taaacgtgcg cgcgggactg cgccatgccc ggagtcgtcc cgaagccggc caccatcacc
     3721 acagaaagca caccgatcgc cgctaatcgc cgcatatttc tcatggccgc ctcttggcat
     3781 ccggacccgg cacctcaccg tggagtccgc ttcttcttga ctggtattct aaggaataga
     3841 gcccgcatcg ccagtgcgat gatgccatat tccctgcgaa atgcgcctgg taacacaacg
     3901 tacgcgaacc tgtagcaaaa atgccacgct gcaggccggc cgacgtcagt agatccaggg
     3961 cacgacgcgc gcggtccgtt gcatatacga ccgatactcc tcgccgaagg cgttgatcat
     4021 catgcgctcc tcccgcccga cccgaccgaa aaagagcgcg ccaaagccga cgaacccggc
     4081 cggcccggcg atccaattcg gcagcagcag gacctgggcg agcgccatga gccagaagcc
     4141 cgtgtacatc ggatggcgta tgcgggcgta gacgccggtt gtgaccaggg tgtggcgttc
     4201 gcgcagatca agactcaccg accagttggc gccgaggtcg tgatgcgtgc ggtagaacag
     4261 ccacaggacc gccacgaaca cggcgatccc aagataggcc tgcaccggcg tgaacgggta
     4321 attggcgaac cgcgggaacc cggtcaccac gtagatgaag ggcacgatgc cgagcccagt
     4381 cagcgagcag ccgagcagga cgatttcgcg gacgtcgcgg ccggagtagc gcaccgccgt
     4441 cttgcgcgag cgccggcccg gccgtagccg tagcactgac cagagcaggg cgaagccgag
     4501 ccacacaaat ttcgagattg tcgcggtcac ggcgcgggct ccgtcgcgcc tgccggcgcc
     4561 gccgcttgcc acactgcggt caaggccccc tcgccggtaa aggccgccac cgccgcatcg
     4621 ccatcggcga cccgctcggc gagcgggatc gggccgcagc agagcatgta atagtcgtaa
     4681 tagtagcggc gctcgttgcc catcatcgcc tggcggtgga tgcggaggaa gttgaggtgg
     4741 aaaccccggt aggtcgcctc ctcgaccatc gcccggatgc gcatgatctt tatgatcggc
     4801 ttgccggtcg tcgcgagacc gagcgccacg accggatcga ccttgtagac attgatgatg
     4861 tcgacgagcg cctggaactc gacccagtag atcggcgcgg tcgcgacccg ggccacggcc
     4921 tcgcgcagcc agccggcggc cgggtgcagc gcgactttga gcagcgagga gccgctggaa
     4981 atgaggtgca gcggcctgcc gcgccggctg agttccgggt cgagtttcaa ggcgcggtcg
     5041 accacgacga gggagagcgg cgcgcccagg ctgtggccgt cgacgatgat ctcgtcggcg
     5101 tcggtctcac gcgcgatgcg gaccagttcc gccgcaaagc ggtcgagccg ctcctcgatc
     5161 cccggccgca cgcgatgaat gaagtcgcgc gcgaagtacc aatcgtcgag cgcatagcgg
     5221 atgaacagcc tctggccgaa gatcagccgc agcgccacga agagcgcgaa cgcaagcagc
     5281 ggcgcccaga acagggaata cggcaggccg ctgtggccca cgacgagccg cgtgagcccg
     5341 atcgacagcc agatcatgcc gagaatgtag atgagaggag agagaaagaa gccgccgtat
     5401 cgccacgcca cgacgaaata tttggtcgct gtgccggtga gaataaactc tatcaaggcg
     5461 gcgacgccga gcggaaagcg ccaccagtcg ctctcctgcg cgtccgccga cacgaagtcg
     5521 tcccagcgga agtaatgata gtcggtggcg acgcgccagt tcggcccgct ggtctcgacc
     5581 gtccagttcg cgaccgcgcc gtcggcggaa acgctgagcg gggaaacgct gccgctcacg
     5641 ttccacgcct tctggaaccg cgccatctcg cggacgaagc gccgatggtg gtgttcggcg
     5701 ccgaccggct cgtagccgat catctgcaca aagcaacgct tgcgcaccag cgctggcggc
     5761 atggataacc ctctcggccg ttcattaggg aatatgcgtt cgccaatcaa gcgaagcggt
     5821 gacccaagct tttgcgtgaa caagttccga taacctgccg cccgccgggc gcaatcggcg
     5881 ctaccaggcg cgcggcggcg agcacacttt ggccgaagcc gccgttgaac ttggcgacat
     5941 ccttcgctat acggggcatt gacgatctga ggggcccgga acgatcgggc tggttggcgc
     6001 cgtcgttgcg acggcacctt ttacgccgtc aagaaatgag cacgcccgat gtccaccacg
     6061 tttgataaag tggctgaaat cattgcggaa acctgtgaca tcccgcgtga gaacatcaag
     6121 ccggaaagtc acgcgatcaa cgatctggag atcgacagtc tcgacttcct cgatatcgcc
     6181 ttcgccatcg acaaggcgtt cggtatcaag ctgccgctcg agcaatggac ccaggaggtc
     6241 aacgacggca aggcgacgac cgaccagtac ttcgtgctca agaatctcag cgagcgcatc
     6301 gacgaactga ttgcggccaa gggcgcctga ggcgccgcaa atgcgtcttg aatattttca
     6361 gatgatcgac cgcttcgtcg aggtcaatat cggcgagcgc cggacacgct cgatctgcac
     6421 agtgcccaag gagagcacgg tgttcgaagg ccacttcccg ggctatccgc tgatgccggg
     6481 cgtgctgctg atcgaatgca tggcgcagac caccggctgg ctcgtgagcg cgctcaccgg
     6541 cttcaccggc ctgcccgcgc ttgccggcgt caaggaaggc aagatccgcg ctgccgtgtt
     6601 tcccggcgac gagctggaat tcgaaggcaa ggtgattcac gaaggctccg gctacgccgt
     6661 cggtgaggcc aagggatggt gcaagggcgc gccggtctgc gacgccacgc tcacctaccg
     6721 catcattccc tatccgagcc cggagctgcg cgccggcctg tgggattggg ccgagcgcat
     6781 caatttcccg gccaaggagt ttgtgaagtg accgcacgcc gcgaggtgtg gatcaccggc
     6841 gttggtcttc tcacctgcct tggagagggg ctcgaatcgg tctggagcca tctcgagcgc
     6901 ggcgatccgc cgccctacga cgacaagagc ttcgcgccct acgtcgtgca tccgctggcg
     6961 ccgatgagtt tcgacaagca aattccgaag aaaagcgacc agcggcagat ggagacctgg
     7021 caacgggtcg gcgtctacac ggcgggcctc gcgctcagcg acgccggcat cgccggcaag
     7081 cccgatctcc tcgaccacac cgacatgatc atcgacgccg gcggcggcga gcgcgacatc
     7141 gccgtcgaca ccgcgatcct cagcggcatg cgcaaggtcg cggaacccgc cgcgtttctc
     7201 aacgagcggt tgatgcggga cctgcgtccc acgctgttcc tggcgcagct gccgaaccta
     7261 ttggccggca acatctcgct ggtgcacggc gtcgtcggct cctcgcgcac cttcatgggc
     7321 gaggaaggag ccggcgtcga cgccgtgcgc gtcgcccaag cgcgcatcgc cgccggtcag
     7381 agcgaactca ccttggtcgg cggctcctac cacgggccgc gctgggacgt cctgttctca
     7441 ttcgagctca cgaactcggc actcaagggc aaatttgcgc ctgtctggga tcgcggtccg
     7501 cagggcggca tcgcgtttgc gaccatgggc gcttttctcg tcctcgaaag ccgcgagcat
     7561 gcgcaggcgc gcggcgcacg ccccaggggg cgcatctcgg aggtctattc cgaccgcaat
     7621 cttcgcaagc cgggcgacat cgaagcgtcg ctgcggcggc agttcgcggc ggtcgcccct
     7681 cgggtcgagc acgcccacgc agccgtcatc tccggcgctt ccgggctcga gccggcgact
     7741 tcggcggagc tgagcgtgct caaggagttc gggcttcccg tccgcaacgc tgggacttat
     7801 atcggacacg gggtcgatac tcagttcgcg gcgaatatcg gcatcgcctc cgcggtactc
     7861 gagcacggca agctgttcgc cccggccgga agcggcgaca gcggcgcaac tccgccgtcg
     7921 ctgtcccagg tcgtggtcac cagcgtaggc aattggcgcg gagaagggct cgcgctggta
     7981 acgcgagccg aatgaaggag gggttcatgg caggcccaat gacccgcgat aaggcaggcc
     8041 gtcaggtcgt cgccatcacc ggcatgggcg ttgtcacctc gctcggcgtc ggcaagtccg
     8101 acaattgggc gaaattgact gccggcgcct ccggcatccg ccgcatctcg cgctttcccc
     8161 tggacagcat gcgcaccacg atcgctggga cggccaacga cgtgtacaag gactatatgc
     8221 cgccggccga gctgtcgaaa cgtgtcgctc tcctcgccgg cgaagaggcg atcgcggagt
     8281 cgggcattgg cggcaagggc cactttcctg gccccctgtt cattgctttg ccgccgctcg
     8341 aaatcgagtg gcactatcgc gtgcaggtcg ccgaaacggc ggcaccgacc ggcgaggccg
     8401 gctaccccga cctggtgcgg gtggcgcgtg agccgcagtt cgcgccaatt tcgaacacgc
     8461 tcagatacgg catcatcggc gagcacgtcg ccgcgcattt cggcaccgag ggatccccga
     8521 tctcgctgac gacagcttgc gcctccggcg cgacggcgat ccagctcggc gtcgaagcga
     8581 tccggcgcgg cgaatgctcg gcagcgctgg cgatcggcgc cgacggttcg ttgacgccgg
     8641 aatcgctcgt gcgcttctcg ctcctgtcgg cgctctcgac ccagaacgac ccgccggaac
     8701 aggcctcgaa gccgttctcg aaaaaccgcg acggcttcgt gctcgccgaa ggcggcggcg
     8761 ccctggtgct cgaggatctc gattacgccc gagcgcgcgg ggcgcgcgta ctcggcattc
     8821 tcgaaggctg cggcgaaaaa tccgattcct tccaccggac ccggtcgagc ccggacggca
     8881 agccgatcat cgcctgcatg cgcaacgcgc tggccgacgc cggcgtcggc gccgaagacg
     8941 tggattacat caacgcgcac ggcacctcga cgcccgagaa cgacaagatg gagcatctgg
     9001 gtgtctcggc cgtgttcggc gaacgcattc gcggcatccc gatctcgtcc aacaaatcga
     9061 tgatcggcca caccttgacc gcggccggcg cggtggaagc ggtgttctcg ctgctcacgc
     9121 tcgagcacca gcgcattccg ccgacgatca atcacaatgt tcccgatccc gcgattctgc
     9181 tcgacgtcgt gcccaacgtg gcgcgcgacg cgcgggtcac gcgcgtcatc tccaattcgt
     9241 tcggcttcgg cggccagaac gtttgcctgg tcatgacccg ggagccggcg tgagcgacgc
     9301 ggcaccaccc gcgctgggcg gcgagcgcga ggctcccacc cgatccccgc ccggccgcag
     9361 cggcgcggat gcgcgcatgc gcgcgctcag cctcgttggc gaccgcaaga tcgagcttgt
     9421 cgaaatcgcc gccccagcgg cgcccgcggt aggcgaggtg cagatcgcca tcaaggcgat
     9481 cggcctcaac cacatcgacg tgtggggctg gcgcggcatg gccttcgcca agcgcaagct
     9541 gccgctcatc gtcggcgtcg aggcggccgg cgagatcgtc gccgtcgggc cgtctcctgc
     9601 gcctgccgca acggcggcaa gcagcgaggc gttcaaggtc ggcgaccccg tcgtcgccta
     9661 tggcgggctc acctgcggca cctgcaaagc ctgccgcgaa ggccgcgaca atctttgcga
     9721 gaacgtcgcc ggcatcatgg gcttccacgt cgacggcttc gcccgtgatc ggctcaacat
     9781 gccggcgcgg ctcgcggtgc cggtgccggc aggcgtgagc tttcgcgacg ccgcctgcgc
     9841 gccggtcgca ttctcgaccg tgcagcacat gctgttcgac aacgccaagc tcgaaccggg
     9901 cgagaccatc ctggtgcagg ccggcgggtc gggtatcggc accgccgcca tcaagatggc
     9961 gaaggcgatc ggctgcaccg tcatcaccac cgtcggcgac gacgagaagg cggcgaaggc
    10021 caaggcgctc ggcgccgacc acgtgatcaa ttaccggacc gagcgtttcg aaggcgttgt
    10081 gcgcaagctc accgccaaga agggcgtcga tgtcgctttc gagcacgtcg gacccgacac
    10141 cttcaacggt tcgctcctct gcctcaagcg cggcggacgg ctggtgacct gcggctcgac
    10201 ctcgggccag tcgacgacga tcaacctgtt ccagctctat ctgcagcaat atcgcatctt
    10261 cggctcgttc ggcgcctcga tccgcaacat cggcgagagc ctggccaaga tggcttccgg
    10321 gctcacgcct gtgatcgaca ccgaagtcgc cctcgccgac ttcgagcgcg ggctcgcgcg
    10381 gctggagagc cggcaggtct tcggcaagat catcgtcaat ttctagaacg cgatcgttga
    10441 tcgcgttctc atctcctttg gtggagcatg atcccttcgg aaaaccggcg tccacttttc
    10501 cggatcatgc tctgatgctc ggcgagccct tcaaggcgct gctcgacggc gcggtcggcg
    10561 cgtcggccgt tgggctggtg cgtgcggtga agctcatgga tcgccggagc accgccgact
    10621 tcgccggcgc gctggtgcgc aagaccggac cgctgttcaa ggaacaccgc ctcggtcgcg
    10681 agaacctgcg tgcggccttt ccggaaaaat ccgacgccga gatcgaaaag atcctggccg
    10741 gcgtgtggga caatctcggc cggatcgcca tcgagttcgc gcacctcgac gaatttcatc
    10801 cggcagggct cggccctgcg tccgctgacg tcatcaccta cccgcccgac acgcaggagc
    10861 gcggcgagcg cctgatgaaa accggcaagg cgaccatcgg ttttgccgcc catctcgcca
    10921 attgggagct tcccgcactc ggcgccaagc tcatgggcat caaatccgcg gtgctctacc
    10981 ggcgcccgaa cattacctcg atcagcaatg ccatcgtcag gctgcgcgcg ccgctcatgg
    11041 gcgatctgat cccgaccggc ctcgacgcgc cggtgaagct cgcgcggctt ctgcaatcgg
    11101 gcgtccatgt cggcatgctg gtcgaccagc attacacccg cggcatcgag gtgaccttct
    11161 tcggccggcc ctgcaaggtg aacccgctga tcgcgctgct cgcccgccag accgaatgcg
    11221 ccatccacgg catgcgcgtc gtgcgccagc ccgacggcaa cagcttcagg ggcgagatca
    11281 ccgacgccat cgagccaccg cgcgacgccg agggacgcgt cgatatccgc ggcaccatgc
    11341 aggcgatcac ctcggtggtc gagggctggg tgcgcgaata tcccgagcag tggctctggc
    11401 tgcaccggcg ctggcgggac gagaaagccg acacgcgctg gtagatcgat gagcgttgct
    11461 ggcgtgtgcc
//
LOCUS       DATMQB010000105         3142 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2509393, whole genome shotgun sequence.
ACCESSION   DATMQB010000105 DATMQB010000000
VERSION     DATMQB010000105.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3142
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2509393"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1103)
                     /locus_tag="VNY79_03370"
     CDS             complement(<1..1103)
                     /locus_tag="VNY79_03370"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HWX71519.1"
                     /translation="MPDAFIYDHVRTPRGRGKVDGSLHEVTALNLASQALGAIKSRNN
                     LDPTMVDDVVLGVVDPVGEAGADIARTAALVAGYGDTVAGVQINRFCASGLDAVNFAS
                     AQIMSGQQDMAIGGGVESMSRVGIGSSGGAWAVDPTIAVAEYFLPQGISADLIATKYG
                     FSRDDVDAYAVESQKRAAAAWNDGRFSRSVMTVKDVNGLPILAKDEHMRPDTTMQSLA
                     ALKPSFVQMGEMAGFDFVAVQKHPEVEYVKHVHHAGNSSGIVDGAAAVLLGNGRAGKR
                     AGLKPRARVRAFANIGTEPAIMLTGPVDVTKKVLKRAGMTINDIDLFELNEAFASVVL
                     RYLQAFDLDPAKMNVNGGAIAMGHPLGATGAMIL"
     gene            complement(1354..>3142)
                     /locus_tag="VNY79_03375"
     CDS             complement(1354..>3142)
                     /locus_tag="VNY79_03375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase C-terminal
                     domain-containing protein"
                     /protein_id="HWX71520.1"
                     /translation="TYKAPVDDVMFLLSDVFHIDRYNNLPGFADATPDLLEAVLAEAA
                     KFCEDVLTPLNRVGDKEGCHRHDDGSVTTPSGFKDAYKRLNEAGWMGAAAPAEFGGQD
                     LPTALAQAINEFTCSANMAFAMYPGLTLGAAAALATHGSAEQKATYLPKLINGQWTGT
                     MNLTEPQCGTDLGLVRTRAVPQADGSYKITGTKIFISAGEHDLAENIVHLVLARIEGA
                     PPGVKGISLFVVPKFLVSRDGAVGARNGVSCGSIEEKMGIHGNSTCVMNYDDATGWLV
                     GEANRGLNAMFVMMNEARLGVGVQGLALSEVAYQNAASYAKERLAGRALTGAKFKDKP
                     ADPIIVHPDVRRMLMTMRAFNEGARALVLWTALKSDVAHRSGDAKERQAADDHMGLMT
                     PVIKGVLTDQGFANTVLAQQVFGGHGYIAEHGMEQFVRDARIAMIYEGANGIQALDLV
                     GRKLPKDGGRALQAFLAEVNGYIKERGAEAALAPYVKPLAQALGELQQATMWFMQNAL
                     ANPENAGAGSTDYMHLFGLVALGYMWCLIAEAAKAKAAAGNGAAERMEAKLVTGRFFA
                     ERMLPAATTHLARIKAGASSTMALPAEAF"
BASE COUNT          483 a         1028 c         1061 g          570 t
ORIGIN      
        1 aggatcatcg cgccggtggc gccgagcggg tgccccatgg cgatggcgcc gccgttgacg
       61 ttcatcttcg ccggatcgag atcgaacgcc tgcagatagc gcagcaccac cgaggcgaac
      121 gcctcgttga gctcgaacag gtcgatgtcg ttaatcgtca tgccggctct tttcaggacc
      181 ttcttggtga cgtcgaccgg gccggtcagc atgatcgccg gctcggtgcc gatattggcg
      241 aaggcgcgta cgcgcgcccg cggcttgagg ccggcgcgtt tgcccgcgcg gccgttgccg
      301 aggagaaccg cggcggcgcc gtcgacgatg cccgaggagt tgccggcgtg atgcacgtgc
      361 ttgacgtatt cgacttccgg atgcttctgc acggcgacga aatcgaagcc cgccatttct
      421 cccatctgca cgaacgacgg cttgagggcg gcgagcgact gcatggtcgt gtccgggcgc
      481 atgtgctcgt ccttggcgag gatcggcagc ccgttcacgt ctttcacggt catgaccgag
      541 cggctgaagc ggccgtcgtt ccacgcggcc gcggcgcgct tctggctctc gaccgcatag
      601 gcgtccacgt cgtcgcgcga gaatccgtat ttggtggcga tgaggtcggc ggatatgccc
      661 tgcgggagga aatactcggc gaccgcgatc gtcggatcga ccgcccaagc gccgccggag
      721 gaaccgatgc cgacgcggct catcgactcg acgccgccgc cgatcgccat gtcctgctgt
      781 ccggacatga tctgcgccga ggcgaagttg accgcgtcga ggcccgacgc acagaagcgg
      841 ttgatctgca cgccggcgac cgtatcgccg taaccggcga cgagcgccgc cgtgcgcgcg
      901 atatcggcac cggcctcgcc gaccgggtcg accacgccca gcaccacgtc gtcaaccatc
      961 gtgggatcga ggttgttgcg gctcttgatg gcgccgagcg cctggctcgc cagattgagc
     1021 gcggtcacct cgtggagcga gccgtccacc ttgccgcggc cgcgcggggt gcgcacgtga
     1081 tcgtagataa acgcatcggg catgggcgtc tcctcgaaat gatgacctcc tcccgctggg
     1141 agaaggcggc caggcggccg gtggccgcga agccggattg ggggctgatc gtccgtcaga
     1201 ccgagaatac ccttcgatat agtccacctg ccggggaatt acagcggcta tgaggcgtcg
     1261 ggtgtcatgc acaaggccgg cgcaaaggcg ttcggctatt gcggctcggg gatcgcgcaa
     1321 ttcgctttcg tttctggccg cgacccgcgg cgcttagaac gcctccgcgg gcaaagccat
     1381 ggtcgaactg gcgccggctt ttatgcgcgc gaggtgagtg gtggccgccg gcagcatgcg
     1441 ctcggcaaag aagcggccgg tgacgagctt tgcttccatg cgctcggccg cgccgtttcc
     1501 tgccgcggct ttggccttcg ctgcctcggc gatgagacac cacatgtagc cgagcgcgac
     1561 gagcccgaag aggtgcatgt aatctgtcga gccggcgcca gcattttcgg gattggcgag
     1621 agcattctgc atgaaccaca tcgtcgcctg ctgcagctcg ccgagcgcct gcgccagcgg
     1681 cttcacgtag ggcgccagcg ccgcctcggc gccgcgctct ttgatgtagc cgttgacctc
     1741 ggcgaggaac gcctgcagcg cgcggccgcc gtccttcggc agcttgcggc cgacgaggtc
     1801 gagcgcctgg atgccgttcg cgccctcgta gatcatggcg atgcgcgcat cgcgcacgaa
     1861 ctgctccatg ccgtgctcgg cgatgtagcc atggccgccg aacacctgct gcgccagcac
     1921 ggtgttggcg aaaccctggt cagtgagcac gcctttgatc accggagtca tcaggcccat
     1981 gtggtcgtcg gcggcctgcc gttccttggc atcgccggag cgatgcgcaa cgtcgctctt
     2041 gagcgccgtc cacagcacca gcgcccgcgc cccttcgttg aacgcgcgca tcgtcatcag
     2101 catgcgccgt acgtcgggat gcacgatgat cggatcggcg ggcttgtcct tgaactttgc
     2161 cccggtgagc gcgcggccgg cgagccgctc cttggcatag ctggcggcgt tctgataggc
     2221 gacttcggac agcgccagcc cctgcacgcc gacgccaagc cgcgcctcgt tcatcatcac
     2281 gaacatcgca ttgagcccgc ggttcgcctc gcccacgagc cacccggtcg cgtcgtcgta
     2341 attcatcacg caggtggaat tgccgtggat gcccatcttc tcttcgatcg agccgcagga
     2401 gacgccgtta cgggcgccga cggcgccgtc cctgctgact aagaatttgg ggacgacgaa
     2461 cagcgatatt cccttgacgc cgggcggcgc gccttcgatg cgggcgagca cgagatggac
     2521 gatgttctcc gcgagatcat gctcgccggc ggagatgaaa atcttcgtgc cggtgatctt
     2581 gtagctgccg tcggcctgcg gcactgcgcg ggtgcgcacc aggccgagat cggtgccgca
     2641 ttgcggctcg gtcaggttca tcgtgccggt ccactggccg ttgatcagtt tcggcagata
     2701 ggtcgccttc tgctcggccg agccgtgggt ggcgagcgcg gcggccgccc ccagcgtcag
     2761 gcccggatac atggcgaacg ccatgttggc cgagcaggtg aactcgttga tcgcctgcgc
     2821 cagcgcggtc ggcaggtcct ggccgccgaa ttcggctggc gccgcggctc ccatccaacc
     2881 ggcctcgttg agccgtttgt aggcgtcctt gaatcccgac ggcgtggtga cactgccgtc
     2941 gtcgtggcgg tggcagcctt ccttgtcgcc gacgcggttg agcggcgtga gtacgtcctc
     3001 gcagaatttt gccgcctcgg cgagcaccgc ctcgaggaga tccggcgtgg cgtcggcaaa
     3061 gccgggcagg ttgttgtagc gatcgatgtg aaacacgtcg ctcaagagga acatcacgtc
     3121 gtcaacgggg gccttgtagg tc
//
LOCUS       DATMQB010000106         9431 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1274263, whole genome shotgun sequence.
ACCESSION   DATMQB010000106 DATMQB010000000
VERSION     DATMQB010000106.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9431)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9431)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9431
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1274263"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..549)
                     /locus_tag="VNY79_03380"
     CDS             complement(<1..549)
                     /locus_tag="VNY79_03380"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HWX71521.1"
                     /translation="MSEPVVETQDLAVQFGGVHAVDHVNFILRERELRCLIGPNGAGK
                     STFFKSITGQIRAANSSGRVFIRGQDVTGWATRHIMRLGIGVKTQVPSVMNGLTVLEN
                     LWLSARRTAGHDGADAAVEEVVAELELNGIARRLVGELAHGQRQLVEIGTVLANKPWL
                     VLLDEPAAGLTNAETDRLVAIIK"
     gene            complement(546..1598)
                     /locus_tag="VNY79_03385"
     CDS             complement(546..1598)
                     /locus_tag="VNY79_03385"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX71522.1"
                     /translation="MTSSGFGIGRIRWNWLGALAVLLAALPLVYETSTPTLLAIWALF
                     ALSLALMWGYAGILSFGHAAYFGLGAYTYAIASFNIGESTVPLLLALVVPAIVAAIIG
                     ALMFYGRISDVYLGVMTLVVTLILNRFMNATAGDAYRIGNARLGGFNGIPAFPTLNVP
                     GDPNWAIYGTAYYYVVIVCLLAAYLIGRWILSSAFGRTLIGIRENEQRMELLGYDVAG
                     YKTAIFSVSGAMAGLAGSLFANWAEIVTPSVFSLGQTAEVLIWVIVGGLGTLIGPMIA
                     AVALGSLKLGLGHQTTIDNSLVLGAILILVVLLIPRGFAPSFAAWRRLFAQAQVHRRQ
                     ARGTRRRRLALQDAKQ"
     gene            complement(1595..2461)
                     /locus_tag="VNY79_03390"
     CDS             complement(1595..2461)
                     /locus_tag="VNY79_03390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX71523.1"
                     /translation="MDYAAIVVLEILYMIAFLALISAGLAIVFGMMRVINLAHGEFVM
                     LGGYATIASAKAGINIYLAMLVISPIVVGVIGLIVERLIVRFLYGRMIDVMLATWGLS
                     LLLIGLVTLIFGNTAVSVPAPIPGYQIGHYQMGGYNLFVIAVAAILMSAMWFALRYTR
                     IGLVARGAMQGREIISALGYNPNTIYMLTFMVGAALSGLAGGVMAPLTGLLPSVGGAY
                     IAKAFITVITGGAAVIAGTLTTAALFGTVDQLVSFASTPVVGEIAMLGLALILLRLMP
                     QGITGQFFRNST"
     gene            complement(2615..3793)
                     /locus_tag="VNY79_03395"
     CDS             complement(2615..3793)
                     /locus_tag="VNY79_03395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX71524.1"
                     /translation="MTAGFPLLHAHAADGPIKVGCIEDNSGVLDIYGKPIVMANALAI
                     DEINAAGGLLGRKLELKQYDSQSDIALYTKYAQQLVREDKVDVAHAGITSASREAMRQ
                     TYRRANTLYFYNILYEGGVCDRNCFVTGTTPAQAVEPIIDYAMKKWGNKTYVLAADYN
                     YGQITAKWIAHYVEERKGTVQKTDFFPLDVSDFASTIAKIQDAAPNFICAALVGGAHI
                     SFFRQWAASGMNKKIPLTSTTFGVGNEHLALSAAEGDGILIAGNYSPELDTPANKNFL
                     AAWAKRYGDAKVVHELAVSQYQGIMLWAEAVRKAGTVEREALIKTLETGLKIEGPAGT
                     VAVDPKTHHASLDIHLMVVKDQKLTIIDTAKQRPPADTAQYCDLLKNPDDNKQYEVKI
                     "
     gene            complement(3889..5511)
                     /locus_tag="VNY79_03400"
     CDS             complement(3889..5511)
                     /locus_tag="VNY79_03400"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin domain-containing protein"
                     /protein_id="HWX71525.1"
                     /translation="MVVLAWLLAIAIAVVVVAIAVMFLNRFYRKSTREIALVRTGFGG
                     QRILISGGCLALPFLHKVEEINMRTLRIEVRRAAEKSAITEDRLRVDVELEFYVRVMP
                     SAEGIATAAQALGAKSFTPDGLRNLLEGRFIDAVQAVAARHTMDGLHEHRAEFVASIS
                     ELLRDNLKQNGILLDSVSLTRLDQSAFSAFDENNAFNAVGLRKLAEIIAVNRKKRAEI
                     EADADVSVRQTQLEATKQRLLLTQQEEEAQINQNLEIEKMRAASNAETAKAREGSMIA
                     SEDARIERERQTRAMELAKQSEVRKIELESQLAVELKKVDNAIRLAAKHVEEAKSQAQ
                     AQLARTEVVLAEEHVQTERDRAVADRSHEIALKRVNEQGAVEQAKAETDADVLLRRIR
                     AESEAVRTKAEAERLRLLAQSEGERAVIDAENSRSEALIRMKLEQYRLDRLPEIVSQM
                     MKPAEKIDSIRIHQISGLGGAPGTAPANGDAGQKTPINQVMDSILGMALQLPALRSIG
                     DSIGLDFSSTINSPPTAVAERKPGSDPDRGKK"
     gene            complement(5676..6434)
                     /locus_tag="VNY79_03405"
     CDS             complement(5676..6434)
                     /locus_tag="VNY79_03405"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HWX71526.1"
                     /translation="MDSRGGHPYADRQVARAAAAARNRGSHTGTSRLRATRWGDLIAM
                     TDFKFDPRRTALLNIDMQNCFVENSPVAAPRGREILPRINKLAEVCRKRGALVIHTVH
                     VVRPDGSNTGVMGVIIPAIAAGLINKGNKQAELHPEIIVGKHDIVLEKPRYGAFHGTD
                     LDLILRNRGIDTVIITGICTNVCCETTAREANMRDYKVFFISDATATFNTPEASADQI
                     QPVVLATMKAAFAQVETTAAMIRKLDEQRSAVAA"
     gene            6507..6881
                     /locus_tag="VNY79_03410"
     CDS             6507..6881
                     /locus_tag="VNY79_03410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin"
                     /protein_id="HWX71527.1"
                     /translation="MTFDKGHKEFHTLDMQGGWQVPPGYPPGFQQKIIAGALDENSKR
                     GNRTRLLRIAPGTFSTAPFVHDYWEEVFLLAGDLIVGNDANGKGGEQFRDYTYAVRPP
                     GVHHGPFKSETGCLLLETHYYD"
     gene            7043..8521
                     /locus_tag="VNY79_03415"
     CDS             7043..8521
                     /locus_tag="VNY79_03415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011996035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HWX71528.1"
                     /translation="MADCKTGAEHLKSLQDGRTVYLDGELVGDVTTHKAFRNSVRSAA
                     ALYDFQARPENIELMTFQPESSNRRVNRGWQMPRSYEEMLKRRKALQAWAKLSCGFMG
                     RSPDHLASSLVGQRMGIDVFRRHSEPRAKAFQDYFDYAVKSDLFLTYVIINPQAERGK
                     AWSEQEEDLVARVVDEDSTGITIRGAKMLGTSSIMANEVFVANMQPLKPGEESLAFSC
                     ALPMNAKGLRVLSRKSYEAHAVSVYDNPISSRFDENDALMYFDDVKVPWERLFLYRDT
                     DMCRAQFHDTQGHTYQNYQAQIRLTVKLAFLAGLARRLTEAIGTTKMPAVAEQLGVLA
                     AQVGGVSAMLSGMEASGSQLGEWWVPNKNFMYSAQVLTQELYPRLVQTIRDLAGGALI
                     MLPSSVLDFSNPVMEAIIKKTQRAAAMEPEQKVKFLKAAWDAIGSEFGSRHTQYEMFY
                     AGARFVTAGHSLRTFDWNYATGLLDSLLASYDLQDALRQAEH"
     gene            8540..>9431
                     /locus_tag="VNY79_03420"
     CDS             8540..>9431
                     /locus_tag="VNY79_03420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013945918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HWX71529.1"
                     /translation="MKVAIVNLGQIISGDWRAPFAAGDTIISEGDRITLVGTAAAAAV
                     ESADVVIDAGGMTAIPGLIDSHVHITFGDYTPRQRTVGYLESYLHGGITTAISASEVH
                     VPGRPSDPEGIKALALAAQRCFATYRPADMRVIAGSVILEPGLQACDFTELAELGVTL
                     AKAGFGAVKTAYDYVPLVREAKAAGLITTCHTGGSSIPGSGAITGDHLLAMHPHVSFH
                     INGGPTAMPDSDFERVIKESDIALQVCTAGNLRTTLLCARLAEEHGAFDRFIMGTDTP
                     TGSGVMPLGLLYTIAHCASLT"
BASE COUNT         1642 a         3055 c         3034 g         1700 t
ORIGIN      
        1 cttgatgatg gcgacgagcc ggtcggtctc ggcattggtg aggccggccg cgggctcgtc
       61 gagcagaacg agccacggct tgttggcgag aacggtgccg atctccacca attggcgttg
      121 cccgtgcgcg agctcgccca ccagccggcg ggcgatgccg ttgagttcaa gctcggcgac
      181 gacctcctcg accgcggcgt cggcgccgtc gtgcccggcg gtgcgccggg ccgacagcca
      241 aaggttttcg agcacggtga gcccgttcat caccgagggc acctgcgtct tcacgccgat
      301 gccgagccgc atgatgtgac gcgtcgccca gccggtcacg tcctggccgc ggatgaagac
      361 gcggccgctg gaattggcgg cacggatctg gccggtgatc gacttgaaga acgtgctctt
      421 gcccgccccg ttggggccaa tcaggcagcg cagttcgcgt tcgcgcagaa tgaaattcac
      481 gtggtcgacc gcgtgcacgc cgccgaactg cacggcgaga tcctgggtct cgacgacggg
      541 ctcgctcact gcttggcgtc ctgcagcgca aggcggcgcc ggcgggtgcc gcgggcctga
      601 cggcggtgaa cctgagcctg ggcgaacagc cgccgccacg cggcgaagct cggcgcgaag
      661 ccgcgcggga tcagcaacac caccaggatc aggatcgccc ccagtaccag ggaattgtcg
      721 atggtggtct gatgtccgag tccgagcttg agcgagccca gcgctaccgc ggcgatcatc
      781 ggaccgatca aggttccgag gccgccgacg atcacccaga tcagcacctc agcggtctgc
      841 ccgaggctga acacgctcgg cgtcacgatc tccgcccagt tggcgaacag cgagccggca
      901 aggccggcca tcgcgccgct gactgagaag atcgccgtct tgtagccggc gacgtcgtag
      961 ccaaggagct ccatgcgctg ctcgttctcg cggatgccga tcagcgttcg tccgaaggcg
     1021 ctcgacagaa tccagcggcc aatcaggtag gcagcgagga gacagacgat gaccacgtag
     1081 tagtaggctg tgccgtagat cgcccagttc ggatcgccgg gcacgttcag cgtcgggaag
     1141 gccgggatgc cgttgaagcc gccgagccgc gcattgccga tcctataggc gtcgccggcg
     1201 gtcgcattca tgaagcggtt gaggatcagc gtgaccacga gggtcatgac gccgagatag
     1261 acgtcgctga tgcggccgta gaacatcagc gccccgatga tcgccgcgac gatggccggg
     1321 acgacgagcg ccagcagaag cggcaccgtg ctctcgccga tgttgaacga ggcgatggca
     1381 taggtgtagg cgccgaggcc aaaataggcg gcgtgcccga agctgagaat gccggcgtag
     1441 ccccacatca gcgcgagcga gagcgcaaac agcgcccaga tcgccagcaa tgtcggggtg
     1501 ctggtctcgt acaccagcgg cagcgccgca agcaggacgg cgagcgcgcc tagccagttc
     1561 cagcggatgc gcccaatgcc gaacccggag ctggtcatgt cgaattgcgg aagaactggc
     1621 cggtgatgcc ttgcggcatc agtcgcagca ggatcagggc gagaccgagc atggcgattt
     1681 cgccgaccac cggcgtcgag gcgaacgaca cgagctggtc gacggtgccg aacagcgccg
     1741 cggtcgtcag cgttccggcg atgaccgcag caccgccggt gatcacggtg atgaacgctt
     1801 tggcgatgta ggcgcccccg accgaaggca gcagcccggt cagcggcgcc atgaccccgc
     1861 cggccaatcc ggaaagcgcc gccccgacca taaaggtcag catgtagatc gtattcgggt
     1921 tatagccgag cgccgagatg atttccctcc cctgcatggc gccgcgcgcc acaaggccga
     1981 tgcgcgtgta gcgaagcgca aaccacatcg cgctcatcaa gatagcggcg acggcgatga
     2041 caaacagatt gtatccgccc atctggtagt ggccgatctg gtagcccggg atcggcgccg
     2101 gcacgctgac tgcggtattg ccgaagatca gcgtcacgag gccgatcagc agcaggctca
     2161 gtccccaggt cgccagcatc acgtcgatca tgcgcccgta caggaagcgc acgatcagcc
     2221 gttcgacgat gagcccgatc accccgacga cgatcgggga aatgaccagc atggcgaggt
     2281 agatgttgat gcccgccttg gccgaggcga tcgtcgcata gccgccgagc atgacgaatt
     2341 cgccgtgggc gagattgatg acgcgcatca tgccgaacac gatcgccagt cccgcgctga
     2401 tcagcgcgag aaaggcgatc atgtacagta tctcgagaac gacgatcgcc gcgtagtcca
     2461 ttccctcgct tcccctagag catgatccgg aaaagtggaa accggttttc cgaaaagatc
     2521 atgctccacc aaggaaaacc agagcgcaat cgactcgact tgaaacaatt gcgcttttgg
     2581 cgatggcccg accggatcgc ggcgggctgc ctctctagat tttcacctcg tattgcttgt
     2641 tgtcgtccgg attcttcagc agatcgcaat actgggcggt atcggccggc ggacgctgct
     2701 tggccgtgtc gatgatcgtg agcttctggt ccttgacgac catgaggtgg atatcgagcg
     2761 acgcatggtg tgtcttcgga tcgaccgcga ccgttcccgc cggaccttcg atcttcagtc
     2821 cggtctcgag cgtcttgatc aaggcctcgc gctcgaccgt tccggccttc cgcaccgcct
     2881 ccgcccacag catgattccc tgatactgcg aaacggcaag ttcgtgcacc accttggcgt
     2941 cgccgtagcg cttcgcccac gccgccagga agttcttgtt ggccggcgta tcgagttccg
     3001 ggctgtagtt gccggcgatg aggatgccgt cgccctcggc cgccgagagc gccaggtgct
     3061 cgttgccgac gccgaaggtg gtcgaggtca gcgggatctt cttgttcatg cccgaggcgg
     3121 cccactgccg gaagaacgag atgtgcgcgc cgccgaccag cgcggcacag atgaagttcg
     3181 gcgccgcgtc ctggatcttg gcgatcgtcg aagcgaagtc ggacacgtcg agcgggaaga
     3241 aatcggtctt ttgcacggtg cccttgcgct cctcgacgta gtgcgcgatc cacttcgcgg
     3301 tgatctgccc gtaattgtag tcggcggcga gcacataggt cttgttgccc cacttcttca
     3361 tcgcatagtc gatgatcggc tccaccgcct gcgccggcgt ggtgccggtg acgaagcagt
     3421 tgcggtcgca cacgccgcct tcgtagagga tgttgtagaa gtagagcgtg ttggcgcggc
     3481 ggtatgtctg ccgcatggct tcgcgcgagg ccgaggtgat gccggcgtgg gcgacatcga
     3541 ccttgtcctc gcggacgagt tgctgcgcgt atttcgtata aagcgcaatg tccgactggc
     3601 tgtcgtactg cttgagctcg agcttgcggc cgagcaggcc gccggcggcg ttgatctcgt
     3661 cgatcgccag cgcattcgcc atcacgatcg gcttgccgta gatgtcgaga acgccggaat
     3721 tgtcctcgat gcacccgacc ttgatcgggc cgtcggcggc gtgcgcgtgc aggagcggga
     3781 agcccgccgt caaggccgtt gcacctgcgg tattcagcaa tgtcctgcgg gatatggcca
     3841 tgacgtgctc cttggtttgc gtggccgtcc gttacaaagg cgatttcgtt acttcttgcc
     3901 gcgatcggga tcgctgccgg gcttgcgctc ggcgaccgcg gtcggcggcg agttgatcgt
     3961 ggacgaaaag tcgaggccga tcgaatcgcc gatgcttctg agcgcgggaa gctgcagcgc
     4021 catgccgaga atactgtcca tcacctgatt gatcggcgtc ttctgcccgg cgtcgccatt
     4081 ggcgggtgcc gttcccggcg ctccgccgag gccgctgatc tggtgaatgc ggatcgagtc
     4141 gatcttctcc gccggcttca tcatctggga aacgatctcc ggcaggcgat cgagccggta
     4201 ctgctcgagc ttcatgcgga tcagcgcctc gctgcgcgag ttttcggcgt cgatgaccgc
     4261 gcgctcaccc tcggactgcg ccaagagccg cagccgctcc gcttccgcct tggtgcggac
     4321 cgcctcggac tcggcgcgga tgcgccgcag cagcacatcg gcgtcggtct cggccttggc
     4381 ctgctcgacg gcgccctgct cgttcacgcg cttgagcgca atctcgtgcg agcggtccgc
     4441 cacggcgcgg tcgcgttcgg tctgcacgtg ctcttccgcg agcacgacct cggtgcgggc
     4501 caactgcgcc tgggcctgcg atttcgcctc ctccacgtgc ttggcggcga gccggatggc
     4561 gttgtcgacc ttcttcagct ccaccgcgag ctgcgactcg agctcgatct tgcgcacctc
     4621 gctctgcttg gcgagctcca tcgccctggt ctgccgctcg cgctcgatgc gcgcgtcctc
     4681 cgaggcaatc atcgagccct cgcgcgcctt ggcggtctcg gcattgctgg ccgccctcat
     4741 cttttcgatc tcgaggttct gattgatctg cgcctcttcc tcctgctgag tgagcaagag
     4801 ccgctgcttg gtggcctcga gctgcgtctg ccgcaccgaa acgtcggcgt cggcctcgat
     4861 ctcggcgcgc ttcttgcggt tgaccgcgat gatctccgca agcttgcgca ggccgacggc
     4921 gttgaaggcg ttgttctcgt cgaacgcgga gaacgccgat tggtcgagcc gcgtcaacga
     4981 gaccgaatcg aggagaatgc cgttctgctt gagattatcg cgcagcagct cggagatgct
     5041 ggcgacgaat tcggcgcggt gctcatgcag cccgtccatc gtgtggcgcg cggcgaccgc
     5101 ctgcaccgcg tcgatgaagc ggccctcgag caggttgcgc aggccgtcgg gcgtgaacga
     5161 tttggcgccg agcgcctgcg ccgcggtggc gatgccctcc gccgatggca tgacgcgcac
     5221 gtagaattcg agttcgacat cgacgcgcag gcggtcctcg gtgatggccg atttctccgc
     5281 cgcgcgccgc acctcgatgc gcagcgtgcg catattgatc tcttcgacct tgtgcaagaa
     5341 cggcagcgcc aggcagccgc cggagatcaa aatgcgctgg ccgccgaaac cggtgcgcac
     5401 cagcgcgatt tcgcgcgtcg atttacggta gaagcggttg aggaacatca ccgcgatcgc
     5461 gacaacgact accgcgatcg cgatggcgag cagccatgcg aggacgacca tgttgccccc
     5521 ttcccatttc aggcgcgagc ctgaattcct acaatcccgg cttggattta tttgacatgt
     5581 gaagcgtcgc ccctgtcaat agggagacgc ccgcgcgcga gcgacaaatc gcgcttctcg
     5641 cgccgcggcg agcggaaccg accgcccgta accggtcagg ccgccaccgc gctcctttgc
     5701 tcgtccagct tgcggatcat cgccgccgta gtctcgacct gagcgaatgc agccttcatt
     5761 gttgccagca cgaccggctg aatctggtcg gcagatgcct ccggcgtgtt gaacgttgcc
     5821 gttgcatcac tgatgaagaa caccttgtag tccctcatat tggcttcgcg cgcggtcgtt
     5881 tcgcagcaca cattggtgca gatgccggtg atgatcaccg tgtcgatgcc gcgattgcgc
     5941 aggatcaggt cgaggtcggt gccgtggaag gcgccgtacc gcggcttctc cagcacgatg
     6001 tcgtgcttgc cgacgataat ctcaggatgc agttccgcct gtttgttgcc tttgttgata
     6061 aggccggcgg cgatcgccgg aatgatcaca cccattacgc cggtgttgct gccgtccggc
     6121 cgcacaacat gcacggtatg gatcacgagc gcgccgcgtt tgcggcagac ctcggcgagc
     6181 ttgttgatcc gcggcaggat ttcccgcccg cgcggcgcgg cgaccggcga gttttcgacg
     6241 aagcagttct gcatgtcgat attgaggaga gcggttcggc gcggatcgaa cttgaagtcg
     6301 gtcatggcga tcaggtctcc ccatcgtgtg gcgcggagcc ggctcgtgcc cgtatgactg
     6361 cccctgttac gcgcagctgc ggcggcccgc gcgacctgcc gatcagcata ggggtggccg
     6421 ccacggctgt ccatcgcgcc cggtaagtct gctagtcttg acgagtgtcg gcaccgaact
     6481 gaaggccgta cgcgccggag acgacaatga cgttcgacaa gggtcacaaa gagtttcata
     6541 cgctggacat gcagggcggc tggcaagtcc cgcccggcta tccccccggc ttccagcaga
     6601 aaatcatcgc cggtgcgcta gacgaaaaca gcaagcgcgg caatcgcacg cgcctgctgc
     6661 gcatcgctcc tggaacgttc tcgaccgcac cgttcgtgca tgattattgg gaagaggttt
     6721 ttctgctcgc cggcgacctg atcgtcggta acgatgcgaa cggcaaaggc ggcgagcagt
     6781 ttcgcgacta cacctacgcc gttcgtccgc ccggggtcca tcacgggccg ttcaagtccg
     6841 agaccggatg cctgctcctg gagacgcact actacgattg aggcgcccgc gttcgatcct
     6901 cgcggcgtcg gtcggccggc agtccgcagg gcggcaggag tccggcttgg tatccgatag
     6961 gcgcaaggct agcatcagtc cccaggcggg cagtcccaag tgatgcaatt cgcgtcccgg
     7021 catcattcag acggagcaga ccatggccga ctgcaaaacc ggcgcggagc atctcaaatc
     7081 attgcaggac ggccgcaccg tctatctcga cggcgaactg gtcggcgacg tcaccactca
     7141 caaggcgttc cgcaattcag tgcgctccgc cgccgcgctc tacgactttc aggcgcggcc
     7201 cgaaaatatc gagctgatga ccttccagcc cgaaagctcc aaccggcggg tgaaccgcgg
     7261 ctggcagatg ccgcgcagtt acgaggagat gctcaagcgc cgcaaggcgc tgcaggcttg
     7321 ggcgaagttg tcctgcggtt tcatggggcg ctcgcccgat cacctcgcct cctcgctggt
     7381 cggccagcgc atgggcatcg acgtcttccg ccgccacagc gaaccgcgcg ccaaggcgtt
     7441 ccaggattat ttcgattacg cggtcaagag cgacctgttc ctcacctacg tgatcatcaa
     7501 tccgcaggcc gagcgcggca aggcctggag cgagcaggaa gaggatctcg tcgcccgcgt
     7561 cgtcgacgag gattcgaccg gaatcaccat ccgcggcgcg aagatgctcg gcacttcctc
     7621 gatcatggcc aacgaggtct tcgtcgccaa catgcaaccg ctcaagccgg gcgaggaaag
     7681 cctcgccttc tcctgcgccc tgccgatgaa cgccaagggt ctgcgcgtgc tttcgcgcaa
     7741 gtcctacgag gcgcacgcgg tgtcggtcta cgacaatccg atctcgtcgc gcttcgacga
     7801 gaacgacgcg ctgatgtatt tcgacgacgt gaaagtgccg tgggagcggc tgttcctcta
     7861 tcgcgacacc gacatgtgcc gcgcgcaatt ccatgatacc caggggcaca cctatcagaa
     7921 ctaccaggcg cagattcgcc tgaccgtgaa gcttgccttc ctggccgggc tcgcccgccg
     7981 cctgaccgag gcgatcggta cgaccaaaat gccggcggtg gccgagcagc ttggcgtgct
     8041 tgcggcccag gtcggcggcg tcagcgccat gctgtcaggc atggaggcat cgggctcgca
     8101 gctcggcgag tggtgggtgc cgaacaagaa cttcatgtat tcggcgcagg tcctgacgca
     8161 ggagctctat ccgcgtctgg tgcagaccat tcgcgatctt gccggcggcg cgttgatcat
     8221 gctgccctcc tcggtgctcg atttcagcaa cccggtgatg gaggcgatca tcaagaagac
     8281 gcagcgcgcc gccgccatgg agccggagca gaaagtgaaa ttcctcaagg ccgcctggga
     8341 cgccatcggc tcggaattcg ggtcgcgcca cacccagtat gaaatgttct atgccggcgc
     8401 gcgtttcgtc accgccggcc acagcttgcg caccttcgac tggaactacg cgaccggcct
     8461 cctcgactcg ctgcttgcct cctacgattt gcaggatgcg ctcaggcagg cggagcattg
     8521 atggcgggag cgcacgcggg tgaaggtcgc aatcgtcaat ctcggacaga tcatctccgg
     8581 cgactggcgc gcaccgtttg ccgcaggcga cacgatcatc agcgagggtg accgcatcac
     8641 gctcgtcggc accgccgcgg ccgccgccgt cgaaagcgcc gatgtggtga tcgatgccgg
     8701 cggcatgacc gcgataccgg gattgatcga ctcgcatgtc cacatcacct tcggcgacta
     8761 taccccgcgc cagcgcacgg tcggttacct cgaaagctac ctccacggcg gcatcacaac
     8821 ggcgatctcg gcgtcggagg tgcacgtgcc gggccgcccc agcgatccgg aaggcatcaa
     8881 ggcgctggcg ctcgcggcgc agcgctgctt cgcgacctac cggccggccg acatgcgcgt
     8941 gatcgccggc tcggtgatcc tggagccggg attgcaggcg tgcgacttca ccgagcttgc
     9001 cgagctgggc gtcacgctcg ccaaggccgg cttcggcgcg gtcaagaccg cgtacgacta
     9061 cgtgccgctg gtgcgcgagg ccaaagccgc gggcctgatc accacatgcc acactggcgg
     9121 ctcgtccatt cccggctcgg gcgcgatcac cggcgaccac ctgcttgcga tgcatccgca
     9181 tgtatcgttc cacatcaacg gcgggccgac cgcgatgccc gacagtgact tcgagcgcgt
     9241 gatcaaggag agcgatatcg cgctgcaggt ctgcaccgcc ggcaacctgc gcaccacgct
     9301 tttgtgcgcg cggctcgccg aggaacacgg cgccttcgac cgcttcatca tggggaccga
     9361 cacgccgacc ggttcgggcg tcatgccgct cggcctgctg tacacgatcg cgcattgtgc
     9421 gagcctgacc c
//
LOCUS       DATMQB010000107         4008 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_961548, whole genome shotgun sequence.
ACCESSION   DATMQB010000107 DATMQB010000000
VERSION     DATMQB010000107.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4008)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4008)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4008
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_961548"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..338
                     /locus_tag="VNY79_03425"
     CDS             <1..338
                     /locus_tag="VNY79_03425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2244 domain-containing protein"
                     /protein_id="HWX71530.1"
                     /translation="LGLDVLLIYWAFRINYRAARAYEEVTVTTSELTVRKVSHRGSVR
                     EWTLNPLWVRLERVAHEEFGIERLFLISHGRRLSIAACLGPDEKASFAGALSTALSEA
                     KRGPTRTVP"
     gene            482..1369
                     /locus_tag="VNY79_03430"
     CDS             482..1369
                     /locus_tag="VNY79_03430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional helix-turn-helix domain-containing
                     protein/methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HWX71531.1"
                     /translation="MLSPDRLTDLTPLADAAADYDVVRRAIGHIRGHWREQPEIEAIA
                     EAAGVTPTELHHLFRRWAGITPKAFLQALTLDSARQLLRDSASVLDATYEVGLSGPGR
                     LHDLFVTHEAMSPGEWKSGGEGLTVRFAFHPSPFGNALVMATERGLAGLAFADPGAEE
                     ATLAEMKARWPKASYVADAARTAPIARRIFDPTLWQAEQPLRVVLIGTDWEVRVWQAL
                     LRIPMGRLATYSGIAGKVCSPTAARAVGAAVGKNPLAFVVPCHRVIGKAGELTGYHWG
                     LTRKRAMLGWEAGKMAAAA"
     gene            complement(1496..2119)
                     /locus_tag="VNY79_03435"
     CDS             complement(1496..2119)
                     /locus_tag="VNY79_03435"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004619 - phosphoglycerate mutase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HWX71532.1"
                     /translation="MGERILVLVRHGESEWNLKNLFTGWRDVGLTEKGIREAQAAGRR
                     LKAQGLRFDVAFTSALVRAQHSLDLMLDELAQKNIPVLRDQALNERDYGDLSGLNKDD
                     ARAKWGADQVHVWRRSYDVAPPGGESLKDTAARVLPYYIEEILPRVLRGENVLVSAHG
                     NSLRALIMVLERLSPREIVARELATGAPQIYRLNPDATVAEKQDLAA"
     gene            complement(2185..3012)
                     /gene="dapB"
                     /locus_tag="VNY79_03440"
     CDS             complement(2185..3012)
                     /gene="dapB"
                     /locus_tag="VNY79_03440"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008839 - 4-hydroxy-tetrahydrodipicolinate
                     reductase [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HWX71533.1"
                     /translation="MSAANSDMRVVIAGAGGRMGRTLIHAIAATKGVALSSAAEAADS
                     AVIGRDAGELAGLGPNGIKVVSDVAPLLAAADGLIEFTIPAATLALAELTAAAGIVHV
                     IGTTGHSAEEEAVIAKAADRATIVKSGNMSLGVNLLAALVKRVARTLDENYDIEILEM
                     HHNRKIDAPSGTALMLGRAAAAGRGVDLGQRSVRGRDGMTGARCAGDIGFAALRGGTV
                     VGEHSVIFAGPAERVELTHRAEDRMIFARGALHAALWARGKKPGLYSMADVLGLGDI"
     gene            complement(3104..3406)
                     /locus_tag="VNY79_03445"
     CDS             complement(3104..3406)
                     /locus_tag="VNY79_03445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009031324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1330 domain-containing protein"
                     /protein_id="HWX71534.1"
                     /translation="MAKGYWIGRVDVANEEGYKPYSAANAAIFRKYGGRFVVRAGKFE
                     GVEGASRSRNVVIEFPDYATALACYRSPEYQANIKVRLPHATADIIVIEGYDGPQP"
     gene            complement(3408..>4008)
                     /gene="pyrF"
                     /locus_tag="VNY79_03450"
     CDS             complement(3408..>4008)
                     /gene="pyrF"
                     /locus_tag="VNY79_03450"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0044205 - 'de novo' UMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HWX71535.1"
                     /translation="IGYQLAFAGGLAYAQALAGAGKRVFLDLKLHDIGNTVAQGVKSV
                     SRLGASFLTVHGYPQTMQAAVEAREGLLRILAVTVLTSYDNRDLKAAGYAASVPELAA
                     GRAAQAREIGVDGIVCSAEEAARLRAIIGPKLALVTPGIRPSGSDRGDQKRIMTPTAA
                     IVSGADYLVVGRPIVAAADPRTAAEAIVGEIAQQANKEK"
BASE COUNT          620 a         1392 c         1340 g          656 t
ORIGIN      
        1 tcctcggcct cgacgtgctg ctgatctact gggcgttccg gatcaactat cgtgcggcgc
       61 gcgcctatga ggaggtgacg gtcacgacct cggaactcac cgtgcgcaag gtcagccatc
      121 gcgggagcgt gcgggaatgg accctcaacc cgctgtgggt gcgcctcgag cgcgtcgccc
      181 acgaggagtt cggcatcgaa cgcctgttcc tgatctccca cggccggcga ttgtcgatcg
      241 ccgcctgcct ggggccggac gaaaaggcga gtttcgcggg cgcgctttcg accgcgctga
      301 gcgaagccaa gcgcgggccg acgcgaacgg tgccgtaacg agcccgaatg gcgaatggtc
      361 cgagcaaatg gcggggaacc gttccattcg ctcctcgcta ttcgccattc gcctctccag
      421 aaatcgggtg gttgcggtgc tggcggcggc ctagatgggg agcagaatga tggaggcatc
      481 catgctgtcg cccgatcgat tgaccgactt gaccccgctc gccgatgccg ccgccgacta
      541 tgacgtggtg cgccgcgcca taggccatat ccgcggccac tggcgcgagc agcccgagat
      601 cgaggccatc gccgaggccg cgggcgtcac cccgaccgag ttgcatcacc tgttccgccg
      661 ctgggccggg attacgccga aggcgttctt gcaggcgctc acgctcgata gcgcgcggca
      721 attgctgcgc gattcggcga gcgtgctcga cgccacctac gaggtcggcc tatccggccc
      781 tggccgcctg cacgaccttt tcgtcaccca cgaagcgatg tcgcccggcg agtggaaatc
      841 gggcggcgag ggcctcacgg tgcggttcgc gttccatccg tcgccgttcg gcaatgcgct
      901 ggtcatggcg accgagcgcg ggctcgccgg gctggccttt gccgatcccg gcgccgagga
      961 agcgacgctc gcggaaatga aagcgcgctg gccgaaggcg agctacgtcg ccgacgcggc
     1021 gcggaccgcg ccgatcgcgc ggcgcatctt cgatccgacc ttgtggcagg cggagcagcc
     1081 gctgcgcgtc gtgctcatcg gcaccgactg ggaagtacgg gtctggcagg cgctcctcag
     1141 gataccgatg ggccggctcg ccacctattc cggcatcgcc ggcaaggtct gctcaccgac
     1201 ggccgcgcgc gccgtcggcg ccgcagtcgg caagaacccg ctcgccttcg tcgtgccctg
     1261 ccaccgcgtc atcggcaaag ccggcgagct caccggctat cactggggcc tcacccgcaa
     1321 gcgcgccatg ctcggctggg aggcgggcaa gatggccgct gcggcgtaga cgctctttct
     1381 cgtcattgcc gggctgaccc ggcaaacatg cggcagcgcc gcaccagcgg cgattaggct
     1441 atggacccgc gggtcagcgg ggtgcccgtc ccgcgggtga cgatcgaata gattgctatg
     1501 ccgctaggtc ctgcttctcc gccacggtcg catcggggtt gagccggtag atctggggcg
     1561 ccccggtcgc cagctcgcgc gccacgatct ccctcggcga gaggcgctcg agcaccatga
     1621 tcagcgcccg cagcgaattg ccgtgtgcgg aaacaagcac gttctcgccg cggagcacgc
     1681 gcggcaggat ctcctcgatg taatagggaa ggacgcgcgc cgcggtatcc ttgaggctct
     1741 caccgcccgg cggcgccaca tcgtaggagc ggcgccagac gtgcacctgg tcggcgcccc
     1801 acttcgcccg cgcgtcgtcc ttgttgaggc ccgacagatc gccgtagtcg cgctcgttga
     1861 gcgcctgatc tctgagcacc ggaatattct tctgcgcgag ctcatcgagc atgagatcga
     1921 gcgagtgctg cgcgcgcacc agcgccgagg tgaaggcgac atcgaagcga aggccttgcg
     1981 ccttcagcct gcgcccggcc gcttgcgctt ccctgatccc cttttcggtc agaccgacgt
     2041 cgcgccagcc ggtgaacaga tttttcagat tccactcgct ctcgccatga cgcacgagga
     2101 cgagaatgcg ctcacccatc ggttttcctt ctactgcttt cccatcatcc cgaggtgcgc
     2161 gcgaagtggg gatcacggaa caagtcagat atcgcccaat cccaacacgt ctgccatcga
     2221 gtagagtccc ggcttcttgc cgcgcgccca cagagccgcg tgcagggcgc cgcgggcgaa
     2281 gatcatgcgg tcctcggcgc ggtgcgtgag ctcgacgcgt tccgccgggc cggcgaagat
     2341 cacgctgtgc tcgccgacga cagtgccgcc gcgcagcgcc gcaaaaccga tatcgccggc
     2401 gcagcgcgca ccggtcatgc cgtcgcggcc gcgcaccgaa cgctgcccga gatcgacgcc
     2461 gcggccggcg gcggcggcac ggccgagcat gagcgcggtt ccggacggcg cgtcgatctt
     2521 cctgttgtga tgcatctcca gaatttcgat gtcgtagttc tcgtcgagcg tcctggcgac
     2581 gcgcttgacc agggcggcga gaagattgac cccgaggctc atgttgccag atttcacgat
     2641 cgtggcgcgg tcggccgcct tggcgatcac cgcctcttcc tcggcggaat ggccggtggt
     2701 gccgatgacg tgcacgatgc cggcggcggc ggtcagctcg gccaaggcaa gcgtcgcggc
     2761 tggaatggtg aactcgatga gcccgtcggc ggccgcaagc agcggcgcca cgtcgctgac
     2821 gaccttgatc ccgttcggcc ccagcccggc aagctcgccg gcgtcgcgcc cgatgacggc
     2881 ggaatccgcg gcctcggcag cgctggaaag cgcgacgccc ttcgtcgccg cgatcgcatg
     2941 aatgagcgtg cgccccatgc gcccgcccgc gccggcgatc accacgcgca tgtccgaatt
     3001 cgccgccgac atcgggactg gtctccggtt gccgcggata tagcggggcc gccggacgcc
     3061 agcaacacgc gccctgcgtc ggtccgcttg cgggagagcg agcctacggc tgcgggccgt
     3121 cgtagccctc gatcacgatg atgtcggcgg tcgcgtgcgg cagccgcacc ttgatattgg
     3181 cctggtattc gggcgagcga tagcaggcga gcgcggtggc ataatcggga aactcgatca
     3241 ccacgttgcg cgagcggctc gcgccctcga cgccctcgaa ctttccggcg cgcaccacga
     3301 agcggccgcc gtatttgcgg aagatcgcgg cattggcggc ggagtagggc ttgtaaccct
     3361 cctcgttggc gacgtcgacg cgtccgatcc agtagccttt ggccatatca tttctccttg
     3421 ttcgcctgtt gcgcaatttc cccgacgatc gcctccgccg ccgtcctggg atcggccgcg
     3481 gcgacaatgg gccggccgac gaccagatag tccgcgccgg aaacaatggc cgcagtcggg
     3541 gtcatgatgc gtttctgatc cccacggtcg ctgccggacg ggcgaatccc cggcgtcacc
     3601 agcgcgagct tcgggccgat gatcgcgcgg agcctcgccg cctcctccgc cgagcaaacg
     3661 atcccgtcga ccccgatctc gcgcgcctgc gccgcgcgcc cggcggcgag ctccggtacg
     3721 ctcgcggcgt atcccgccgc cttgaggtcg cgattgtcgt aggaggtgag caccgtcaca
     3781 gcgaggatgc gcaacagccc ctcgcgcgct tcgaccgccg cctgcatggt ctgcggatag
     3841 ccgtgcacgg tgaggaagct cgcgccgagc cgcgacacgc tcttgacgcc ttgcgccacc
     3901 gtgttgccga tgtcgtgcag cttgagatcg aggaacacgc gcttgccggc gccggcaagc
     3961 gcctgcgcat aggcaagccc gccggcaaag gcgagctgat agccgatc
//
LOCUS       DATMQB010000108         2205 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2509837, whole genome shotgun sequence.
ACCESSION   DATMQB010000108 DATMQB010000000
VERSION     DATMQB010000108.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2205)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2205)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2205
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2509837"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(28..450)
                     /locus_tag="VNY79_03455"
     CDS             complement(28..450)
                     /locus_tag="VNY79_03455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008960205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71536.1"
                     /translation="MCDYSLHLVASRPAKVGDVLVATDFERSITRGFAAVGEPGVAVC
                     LLPGTELAFEDNVQYDRAFSLFGRARVEHKVARFRQVNMDDPNIHHDALEFPGGLIVM
                     VTRLTPGQKATVLQLPATAHDQRVKASGEQRTPASLDL"
     gene            complement(633..1862)
                     /locus_tag="VNY79_03460"
     CDS             complement(633..1862)
                     /locus_tag="VNY79_03460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HWX71537.1"
                     /translation="MASGGRILTASRSVIVAGAGIGGLTAALALARNGFRVTVLEQSE
                     RLEETGAGIQLSPNAARTLIDLGLAPMLRPYAVAPTALRVLSATTGLEIVRVPLGEAE
                     QRYGAPYWVIHRGDLQAALTSAIAGRLDVVLKLGMQVEDFVAHRNGVTVSARGRGGLT
                     DERGLALLAADGLWSLVRRRLGHDEAPRFSGRAAWRCLIPAKEVAPEFREPLIHLWLG
                     RDAHLVHYPVKSGRAINVVAITADSSNAPGWIEPAGRADFVAHLAAEPWAPAALSLVR
                     LPEAWLKWTLYDRAPVRRWSQDAVALLGDAAHPMLPYLAQGAAMAIEDAAVAAQCLAR
                     MPDDAAKALRVYCAIRRARTAKVQRLASRNGARYHLAGARARLRDTALRMIGGARLLR
                     HYDWLYDWRPPAALSLS"
     gene            complement(1863..2108)
                     /locus_tag="VNY79_03465"
     CDS             complement(1863..2108)
                     /locus_tag="VNY79_03465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-finger domain-containing protein"
                     /protein_id="HWX71538.1"
                     /translation="MAEIIVPHFHNEPGVAVIEIGAKEFMCVGALPPFDHPHVYCDMG
                     DDDDYTCPYCSTLFRHNAALAPDEARPAECALHDLRA"
BASE COUNT          362 a          745 c          770 g          328 t
ORIGIN      
        1 tctcgccgga gatgcgtccg gctgctgcta gaggtcgagc gaagccggcg tgcgctgctc
       61 gccgcttgcc ttgacgcgct gatcatgcgc ggtcgccggc agctgcagca ccgtcgcctt
      121 ctggccgggt gtcaggcgag tgaccatcac gatcaggccg ccgggaaatt ccagggcgtc
      181 atgatggatg ttcggatcgt ccatgttcac ctggcggaag cgggccacct tgtgctcgac
      241 gcgcgccctg ccgaagaggc tgaaagcgcg atcgtattgg acgttatcct cgaacgccaa
      301 ctcagtgccg ggaagcaggc agaccgcgac gcccggttct ccgaccgcgg cgaagccgcg
      361 cgtgatcgac ctctcgaagt ccgtcgcgac caaaacgtct ccaacctttg ccgggcgcga
      421 ggcgacgaga tgcaggctgt agtcacacat ggaaatactc ctctccagcg aagctcacgc
      481 gaacagctac caggctgttc ttctggctga acacgcgggt tggccaaatg ttcctatgcc
      541 gcggcgacgg cttgagcgcg cgccgaggcg gcgaaccgcg gccggcggct gcccgatccg
      601 gcagcagcgc cgagcttggg ttcattcttt catcagctga gcgaaagggc cgcaggcggc
      661 cgccaatcgt agagccaatc atagtgccgc agcagccgcg cgcccccgat catgcgcagg
      721 gcggtatcgc ggagccgcgc ccgcgcgccg gcaaggtggt agcgcgctcc gttacggctc
      781 gcgaggcgct gtaccttggc cgtgcgcgca cggcgtattg cgcagtagac ccgcagggcc
      841 ttggccgcgt cgtcaggcat gcgcgccagg cattgcgccg ccaccgcggc gtcctcgatc
      901 gccatggcgg ccccctgcgc caggtagggc agcatgggat gggcggcgtc gccgagaagc
      961 gccacggcgt cctgcgacca gcgccgcacc ggcgcgcggt cgtagagcgt ccatttgagc
     1021 caggcctcgg gcagccggac gagcgagagc gcggccggcg cccacggttc ggcggccaag
     1081 tgcgcgacga agtccgcacg gcccgccggc tcgatccatc cgggcgcgtt cgagctgtcg
     1141 gcggtgatgg cgacgacatt gatggcgcgg cctgacttga ccgggtagtg gacgagatgg
     1201 gcgtcgcgcc cgagccagag atggatcagc ggctcgcgga attcgggtgc gacctccttg
     1261 gcggggatca gacagcgcca ggcagcgcgg ccgctaaagc gcggcgcctc gtcgtgcccc
     1321 agacgccggc gcacgagcga ccagagcccg tcggcggcga gaagtgccaa gccccgctcg
     1381 tcggtgaggc cgccgcggcc gcgggccgag acggtcacgc cgttgcggtg ggcgacgaaa
     1441 tcctcgacct gcatgccgag cttgaggacg acatcgagac ggccggcaat cgcactcgtg
     1501 agtgctgctt gcaggtcgcc gcggtggatc acccaatagg gggcgccgta gcgctgctcg
     1561 gcctcgccga gcggcacgcg cacgatttcg agaccggtcg tggcgctgag cacgcgcagc
     1621 gccgtgggcg ccacggcata cggacgcaac atcggcgcca ggccgagatc gatcagcgtg
     1681 cgcgcggcgt tgggcgaaag ctggatgccg gcgcccgtct cctcgagccg ctccgactgc
     1741 tccagcaccg tgacccggaa gccgttgcgc gcgagcgcga gcgccgcggt caatccgccg
     1801 atgcccgctc cggcaacgat gacgctgcgc gaagccgtca ggatacgccc tcccgaggct
     1861 attcaggcgc gaagatcgtg caaggcgcat tcggccggcc gcgcctcgtc gggcgccagg
     1921 gccgcattgt ggcgaaacag cgtcgagcaa tacggacagg tgtagtcgtc gtcgtcgccc
     1981 atgtcgcagt agacgtgcgg atgatcgaac ggcggcaggg cgccgacgca catgaattcc
     2041 ttggcgccga tctcgatcac cgcaacgccg ggctcgttgt gaaaatgggg aacgatgatc
     2101 tccgccatgc ttgcgcgatc cgcttgtgcc gggcggcgac atggccgccc gcgccgccca
     2161 ttcctagcaa tgcgtcctat cccatgcatc acaattttca tgcaa
//
LOCUS       DATMQB010000109         5172 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3130912, whole genome shotgun sequence.
ACCESSION   DATMQB010000109 DATMQB010000000
VERSION     DATMQB010000109.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5172)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5172)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5172
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3130912"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(103..339)
                     /locus_tag="VNY79_03470"
     CDS             complement(103..339)
                     /locus_tag="VNY79_03470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71539.1"
                     /translation="MAATGKFVCAGCRWWHYHPTEGAEPGSEQAVGYCRRFPPARREN
                     GVGAWPITFGSDWCGEFTDKAEVSWPISRVAPSH"
     gene            605..2680
                     /locus_tag="VNY79_03475"
     CDS             605..2680
                     /locus_tag="VNY79_03475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018431426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HWX71540.1"
                     /translation="MARVGVDVGGTNTDLVLEADHGVFVHKVASTPHDQSEGVLKGLR
                     ELCEISGVRPDDVSLIVHGTTIATNITIEHNGAEVGMLTSRNFRDILHIGRHKRPYNF
                     SLHFEVPWQQRPLVKRRNRIAVTERIVPPDGKVETPLDESEVAEAIKLFKRRGIKSVV
                     IGFLFSFLNDAHERRAAELVRAEMPDAYICTSSEVANVIREYERFSTAAMNAFVGPKT
                     SLYLNNLQSKLSDSGFRANLRVIQSNGGIATVETCAQKAVGILMSGPAGGVIGGRAEG
                     MLCGRSNLITVDIGGTSADISTIPDGRIKIMNARDSYVNGHPILVPMIDLVSIGAGGG
                     SIAYIDSAGGFHVGPRSAGAEPGPACYGKGGEEPTVTDAQVVLGRLDADKMLGGDLPL
                     DPDLAHKAVEAKVAKPLGLSVKDAALGIIKVINSNMALAIRSNSVARGIDPREFALVP
                     FGGAGPLHGVALAEAIAAKEIIVPVAPGITAAMGLLQTDMQYEHARSLIVSLKHVDQA
                     AIARINAVIDELVERCRRDLEKDGVKPERQKFQKLAECRYHGQGFELRASLPDGKVTA
                     ANLADVVTGFHQQHRLDYGYHFDDGEVELITIRVIGREDVVPLKVAQIDKANGQAISD
                     AVLYSRPTTFDDGVTVETPRYDRGRLKAGHRVAGPAILIQHNSTTLLPPGYVAEVAEF
                     GNLHVRRTG"
     gene            2713..4875
                     /locus_tag="VNY79_03480"
     CDS             2713..4875
                     /locus_tag="VNY79_03480"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HWX71541.1"
                     /translation="MSREAIDPITLQVINGALQTIAEEMGHVLYRMSFSSIIRESQDL
                     GAGLFDTDFNTLCESESTPLHIGSLPGYLAGIRDTLQGGEWHEGDLVIHNHPYHGSSH
                     SPDIAVVVPVFHEGTLVGFSANTAHHLDIGAATPGLIIDIPDVFAEGMLFAGTKLYER
                     GKRNEALWDYIGRNSRAARQLQDDLDAQIASARLGAKRFVELMDRCGRQTVFDATQQL
                     MDYTERVLRQRIAAIPDGEYRAEGFLDDDGKNRDVRLPIKVCVRVEGDGIEIDLTGSS
                     KQVETAFNVPFEGSTKVACFCAIRSLLLDAVTSDVKVPSNQGSFRPVKVTAPKGSIYN
                     PIFPAAAEARFAQINRVIDLIYKALAPVLPNDIIAGSSASLSFCSYAGVRPSGDYWVF
                     LEVNEGSYGGRPRADGPDSIDNLMANTRNNPLEDLAMHLPMICDRYELRDDVMPGAGR
                     SRGGIGVVKAQRVLTDAFITHENERHHDVPWGIFGGGPGAVGKVDIYNVARPTDVKHM
                     PAKFSGLRVAAGDVHVFYGPCGGGFGDPLERPAEKVLDDVLDGFCTVEHARAAYGVVL
                     DPVAETVDAAATRALRERMQSAPQLPAAAAEEPRATPRPQAPPARLPEPPRPVDPPPR
                     PRAAPQSIAARQEHPLAEVLRGLRDAHGDAWSFEIVRHSAYGNTIEVVGELRANGSTV
                     RESAAAAGGQGRSLGELLERAANDSLQKCVDTLLRNGR"
     gene            4914..>5172
                     /locus_tag="VNY79_03485"
     CDS             4914..>5172
                     /locus_tag="VNY79_03485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71542.1"
                     /translation="MEQRATIFVEAMVVVAIIGVLAFLIAWLVRSAQTPQAAGTVAGA
                     PAQSPRWYEFTLALLLLAAIAAFAIWLISSGRQWAWGETFED"
BASE COUNT          887 a         1790 c         1672 g          823 t
ORIGIN      
        1 ccgcgcaagc ggcaatccag ggatttcgtt gtcgccacgc acgctgggtc ctcgcgtccg
       61 cggggacgag cggatcgcag ctttgatccg agccgattga cctcagtggg aaggcgcgac
      121 gcgcgagatc ggccacgaca cctcggcctt gtcggtgaat tcgccgcacc aatcgctgcc
      181 gaaggttatc ggccaggcgc cgacgccgtt ctcgcgacgc gccggcggaa agcgccggca
      241 gtatccgacc gcctgttccg agcccggctc ggcgccctcg gtcgggtgat aatgccacca
      301 cctgcagccg gcgcagacga atttaccagt cgccgccatc gctcgcgttc ctttttctgc
      361 cctgaacggc attcaaccac tatttggttg cagcgctcaa cctcgctgag cgacgcgctc
      421 gggcgccgcc ccgcaccggc ggagcgttcc cgcggcgcgg cgcccggcga tgcctcccgg
      481 gccgcatgtg cgggggttgc acgggcgtac caatgctgac aatgtttcct cgacgatcag
      541 tcgatagcaa aggcgttgtg cacccgggtc tggcacggcg gcgcggggac gattcaggcg
      601 atccatggcg cgcgtaggcg tcgatgtcgg cgggaccaac accgacctcg ttctcgaggc
      661 ggaccacggc gtctttgtcc acaaggtcgc cagcaccccg catgaccagt ccgagggcgt
      721 gctcaaggga ctgcgcgagc tgtgcgagat ttccggcgtc cgtcccgatg acgtgtcact
      781 gatcgtgcat ggtacgacga tcgccaccaa catcacgatc gaacacaacg gcgccgaagt
      841 cgggatgctg acgtcgcgaa acttccgcga catcctgcac atcggccggc acaagcggcc
      901 gtataatttc tcgctgcatt tcgaggtccc ctggcagcag cggccgctgg tcaagcggcg
      961 caaccgcatc gcggtgaccg aacgcatcgt gccgcccgac ggcaaggtcg agacgccgct
     1021 cgacgagagc gaagtcgccg aggccataaa gctgttcaag cgccgcggca tcaagtcggt
     1081 ggtcatcggc ttcctgtttt ccttcctcaa cgacgcccac gaaaggcgcg ccgccgaact
     1141 ggtgcgcgcc gagatgccgg acgcctatat ctgcacctcg tccgaggtcg ccaacgtcat
     1201 ccgcgagtac gagcgctttt cgaccgcggc gatgaacgct ttcgtcgggc cgaagacctc
     1261 gctctatctc aacaacctgc agagcaagct cagcgacagc ggctttcgcg ccaatctgcg
     1321 cgtcatccaa tcgaacggcg gcatcgccac cgtcgagacg tgcgcgcaga aagcggtcgg
     1381 catcctgatg tcggggcccg ccggcggcgt gatcggcggc cgcgccgaag gcatgctctg
     1441 cggccggtcg aacctcatca ccgtcgacat cggcggcact tcggcggaca tcagcaccat
     1501 ccccgatggg cgcatcaaga tcatgaatgc gcgcgactcc tacgtgaacg gccatccgat
     1561 tctggtgccg atgatcgatc tcgtctcgat cggcgccggt ggcggctcga tcgcctacat
     1621 cgattccgcc ggcggctttc acgtcgggcc gcgctcggcc ggcgccgaac cgggcccggc
     1681 ctgctacggc aaaggcggcg aggagccgac cgtcaccgac gcgcaggtcg ttctcggccg
     1741 cctcgacgcc gacaagatgc tcggcggcga cctgccgctc gatcccgacc tcgcccacaa
     1801 ggccgtcgaa gcgaaggtgg cgaagccgct cggcctgtcg gtcaaggacg ccgcgctcgg
     1861 catcatcaag gtcatcaact cgaacatggc gctggcaatc cgctcgaact cggtggcgcg
     1921 cggcatcgat ccgcgggaat tcgcgctcgt tcctttcggc ggcgccggcc cgctgcacgg
     1981 tgtcgcgctc gccgaggcga tcgcggcgaa ggagatcatc gtgccggtgg cccccggcat
     2041 caccgcggcg atggggctgt tgcagaccga catgcagtac gagcatgcgc gctcgctcat
     2101 cgtgtcgctc aagcacgtgg atcaggccgc cattgcccgg atcaatgcgg tgatcgacga
     2161 actggtcgaa cgctgccggc gcgatcttga gaaggacggg gtgaagcccg agcggcagaa
     2221 attccaaaaa ctcgcggaat gccgctatca cggacaagga ttcgagctgc gggcaagtct
     2281 tccggacggc aaggtcaccg cggcgaatct ggccgacgtg gtcacgggct ttcaccagca
     2341 gcaccgcctc gactacggct accatttcga cgacggcgag gtcgagctga tcacgatccg
     2401 cgtcatcggc cgcgaggacg tcgtgccgct caaggtggcg cagatcgaca aggctaacgg
     2461 ccaagccata tccgacgccg tgctctacag ccgtccgacc acattcgacg acggagtgac
     2521 cgtcgagacg ccgcgctatg accgcggccg gctcaaggcc ggccaccgcg tcgccggacc
     2581 ggcgatcctg atccagcaca actcgacaac gctgctgccg cccggctatg tcgccgaggt
     2641 cgcggaattc ggcaatctgc acgtccgtcg caccggctga aggcgataga ggcgctagag
     2701 aagcgatcga gcatgtcccg cgaagccatc gaccccatca cgctccaggt gatcaacggc
     2761 gccctgcaga ctatcgccga ggagatgggc cacgtcctct accgcatgtc gttctcctcg
     2821 atcatccgtg aatcgcagga cctcggcgcg ggcttgttcg acaccgattt caacacgctg
     2881 tgcgaatcgg aatcgacgcc gctgcacatc ggctcgctgc ccggctatct cgccggcatc
     2941 cgcgacacgc tgcagggcgg cgaatggcac gagggcgatc tcgtcattca caatcatccc
     3001 tatcacggct cgagccattc gccggacatc gcggtcgtgg tgccggtctt ccacgaaggg
     3061 acgctggtcg gattctccgc caacaccgcg caccacctcg acatcggcgc ggcgacgccg
     3121 ggactgatca tcgacatccc cgacgtcttc gccgagggca tgctgtttgc cggcaccaag
     3181 ctttacgagc gcggcaagcg caacgaggcg ctgtgggact atatcggccg caacagccgc
     3241 gccgcgcgcc agctgcagga cgacctcgac gcgcagatcg cctcggcgcg gctcggcgcc
     3301 aagcgcttcg tcgagctgat ggaccgctgc ggacggcaga ccgtgttcga cgcgacgcag
     3361 cagctgatgg actacaccga gcgcgtgctg cgccagcgca tcgccgccat tcccgacggc
     3421 gaataccgcg ccgaaggctt tttggacgac gacggcaaga accgcgacgt gcggctgccg
     3481 atcaaggtgt gcgtccgcgt cgagggcgac ggcatcgaga tcgatctcac cggctcgtcc
     3541 aagcaggtcg agaccgcctt caacgtacct ttcgagggtt cgaccaaggt cgcctgcttc
     3601 tgcgccatcc gctcgctgct tctcgatgcg gtgacctcgg acgtgaaagt gccctccaat
     3661 cagggatcgt tccggccggt gaaggtcacc gcgccgaagg gctcgatcta caacccaatc
     3721 tttcccgccg ccgccgaggc gcgctttgcc cagatcaacc gcgtgatcga tctgatctac
     3781 aaggcgctgg cgccggttct gcccaacgac atcattgccg gcagctcggc gagcctgtcg
     3841 ttctgctcct atgccggcgt ccgcccgagc ggcgactatt gggttttcct cgaggtcaac
     3901 gagggctcgt acggcggccg cccgcgcgcc gacggccccg acagcatcga caatctgatg
     3961 gccaatacgc ggaacaaccc gctcgaagac ctggcgatgc atctgccgat gatctgcgac
     4021 cgctacgagc tgcgcgacga cgtcatgccc ggcgccggcc gttcccgcgg cggcatcggc
     4081 gtggtcaagg cgcagcgggt cctcaccgac gccttcatca cccatgagaa cgagcgccat
     4141 catgacgtac cctggggcat attcggcggc gggcccgggg ccgtcggcaa ggtcgacatc
     4201 tacaacgtgg cgcggccgac cgacgtgaag catatgccgg cgaagttttc cggcctgcgt
     4261 gtcgccgccg gcgacgtgca cgtgttttac ggcccctgcg gcggcggctt cggcgacccg
     4321 ctggaacggc cggcggaaaa ggtcctcgac gacgtgctcg acgggttttg caccgtcgag
     4381 catgcccgcg ccgcctatgg cgtcgttctc gatccggttg ccgagacggt ggacgcggcg
     4441 gcgacccggg cgcttcgcga acgtatgcaa tcagcaccgc agctcccggc cgccgcggcc
     4501 gaggagccac gcgcaacgcc gcgaccgcag gccccgccgg cgcggttgcc cgaaccgccc
     4561 cgcccggtcg acccgccgcc gcgcccgcgg gcggcgccgc agtcgatcgc cgcgcgccaa
     4621 gagcacccgc tcgcagaggt gctgcgcggc ttgcgcgacg cccacggcga cgcctggagc
     4681 ttcgagatcg tgcgccacag cgcctacggc aacacgatcg aggtcgtcgg ggagctgcgc
     4741 gccaatggct cgaccgtgcg tgaaagcgcg gcggcggcag gcggccaggg ccgctcgctc
     4801 ggtgagttgc tggagcgcgc ggcgaacgac agcctccaga agtgcgtcga cacgctcctg
     4861 cgcaacggtc ggtaggcaat ccgtcgaggg cttagcgaaa ggtcaggacg tccttggaac
     4921 aaagagcgac aatcttcgtc gaggccatgg tcgtggtcgc cattatcggc gtgctggcct
     4981 tcctgatcgc atggctggtg cgctcggcgc aaacgccgca agcggcgggc accgttgccg
     5041 gcgcgccggc gcaatcgccg cggtggtacg aattcacgct ggccttgctg ctccttgccg
     5101 cgatcgcggc gttcgccatc tggctgattt ccagcggccg gcaatgggcg tggggcgaga
     5161 cgttcgaaga tt
//
LOCUS       DATMQB010000110         3503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4370710, whole genome shotgun sequence.
ACCESSION   DATMQB010000110 DATMQB010000000
VERSION     DATMQB010000110.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3503
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4370710"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..190
                     /locus_tag="VNY79_03490"
     CDS             <1..190
                     /locus_tag="VNY79_03490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003533961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71543.1"
                     /translation="AGLARHPHLRRITVETPSGPVSYPAPAARSAAASRRYGKVPALG
                     EHTARVRGEFTAAAVTAD"
     gene            206..1099
                     /locus_tag="VNY79_03495"
     CDS             206..1099
                     /locus_tag="VNY79_03495"
                     /EC_number="1.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050661 - NADP binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HWX71544.1"
                     /translation="MEIGFIGLGNMGAPMARRLVEAGHHLTVYDTRQESIGNLTALGA
                     VAARSPAEVADAAETVMASLPTPDIVLAVATGARGVIEGKRVRRFVDLSTTGSVMAQR
                     IFALMAARNIVQIDSPVSGGVTGAERGTLAVMASGPRADVEAVEPALSVIGKVFFIGE
                     RPGAGQTMKLVNNVLSATAVAATAEAMVTGAKAGLDPRIMLDVINAGSGRNTASADKF
                     PRCVLPGTFDVGFTAGLMTKDVKLFLSESAALGVPTQVIEAVARLLQMTCDELGSDTD
                     LSTVVRPVEKRAGVEVRAPRS"
     gene            1673..2356
                     /locus_tag="VNY79_03500"
     CDS             1673..2356
                     /locus_tag="VNY79_03500"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0030552 - cAMP binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HWX71545.1"
                     /translation="MPKNTRSGPSLLSALPEHLSKDLFASAKPVRVAADEVLFLAGDK
                     GDGCYRIEEGLLKVTMVSRAGTERILAFFGPGAIVGELSIIDGLPRSASVVAVRNSAL
                     CFLSRAAFDAFALQHPELYKSLVTLLATRLRETDLVIAAGSFLPLKGRVATTLLELAE
                     NFGQDVGAGRIVIRQKIGQSDLAAMAGIARENVSRILNDWKRRKLVSRLSGYYCLENK
                     AQLQTEAEL"
     gene            2376..3500
                     /gene="proB"
                     /locus_tag="VNY79_03505"
     CDS             2376..3500
                     /gene="proB"
                     /locus_tag="VNY79_03505"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004349 - glutamate 5-kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006561 - proline biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HWX71546.1"
                     /translation="MNTPALGDFRRIIVKVGSSLLVDAKAGAIRESWLASLTADLASL
                     HRDKRDILVVSSGAIVLGRAVLKLASSPLKLEDSQAAAAVGQIALARTWTEALSRHGI
                     TAGQVLVTPGDTEERRRYLNARSTIDKLLEWRAVPVINENDTVATTEIRYGDNDRLAA
                     RVATMVSADLLVLLSDVDGLYDAPPDADASARHVPCVARVTPEIEAMAGAAGSELSRG
                     GMQTKIEAARIATNGGTHMVIASGRVEHPLRAVAEGARCTWFLTAANPVTARKKWIAG
                     TLEPKGTLVIDAGAVAALRRGKSLLPAGIVRVEGAFARGDAVIIRGPDGAEIGRGLSA
                     YDADDAEKIRGRSSADIASILGFSGRTEMVHRDDLVVGRE"
BASE COUNT          595 a         1187 c         1151 g          570 t
ORIGIN      
        1 ggccgggctt gcgcgccatc cgcatctgcg ccggatcacg gtcgagacgc cgagcgggcc
       61 ggtttcctat cccgcgcccg ccgcgcggag cgccgcagcg tcgcggcgtt acggcaaggt
      121 gccggcgctc ggcgagcaca ctgcaagagt gcgcggggaa ttcacggcgg cggcggtcac
      181 cgcggactag ccagggagag acacgatgga aatcggcttc attggactcg gcaatatggg
      241 cgcccccatg gcgcgcaggc tcgtcgaggc cgggcatcac ctcacggtct acgacacccg
      301 ccaggaatca atcggcaatc tcacggcgct cggcgccgtt gccgcacgct ctccggccga
      361 agtcgccgac gccgccgaaa cggtgatggc gagcctgccg actcccgaca tcgtgcttgc
      421 agtcgcgacc ggcgcccgcg gcgtgatcga aggcaagcgc gtgcgccgct ttgtcgatct
      481 ctccacgacc ggctcggtga tggcgcaacg catcttcgcg ctgatggccg cgcgcaatat
      541 cgtgcagatc gacagcccgg tgagcggcgg cgtgaccggt gccgaacgcg gcacgctggc
      601 ggtgatggcg tcgggcccgc gcgccgatgt cgaggcggtc gagccggcgc tctccgtgat
      661 cggcaaggtc tttttcatcg gcgaacggcc cggcgccgga cagacgatga agctcgtcaa
      721 caacgtgctc tcggccacgg cggtggcggc aaccgcggaa gcgatggtca ccggggcgaa
      781 agcagggctc gatccgcgca tcatgctcga cgtgatcaac gccggcagcg ggcgcaacac
      841 cgcgagcgcg gacaagtttc cccgctgcgt cctccccggc acgttcgatg tcggcttcac
      901 ggccggtctg atgacgaagg acgtgaagct gttcctttcc gagagcgcgg cgctcggcgt
      961 gccgacgcag gtgatcgaag cggtcgcccg gctcctgcaa atgacctgcg acgaactcgg
     1021 ttccgacacc gatctcagca ccgtcgtgcg accggtggaa aaacgcgccg gggtcgaggt
     1081 gcgggccccg cgcagctgat tcgttggcgg cgcccgtcgc gcgcaatcga gtttggctga
     1141 cacatagccg catctgataa tcggcacggg cgtcgtcggg cgcggcgcgt ttcgtttgtc
     1201 gagctttcaa aaaattttat ttttattcaa aggtctgagc ggaaaagacc tttctgtgat
     1261 ggcggtcact tcaccctcgc gccgggccga ataggtttca atcgttaagt ttcggaccca
     1321 ggagagcgcg gcacatgacg aaaatcggca gacgacccgc tcctaatcga ctggctgttt
     1381 ggcgcagttc cggatgaaga aattcccgac tcacacgcct gatcagcaac aagactagcc
     1441 tgctaaagca cttcttgaga gcaatctgaa atcggctcgc cgtttggccc cgcgcacccc
     1501 cccaaccccc cacggggccg gcggcgaacc tgaaggggtg caatctcggt cccccgacac
     1561 cccaagaccc gcaggtgggt caccttcccg ctcggacggt atgttcgggc gggcttttat
     1621 tatgggcaat tctgccgcat ggttggggcg tccgagtacg aggccttcgg tcatgccgaa
     1681 aaatacccgt tcaggtccga gcctgctctc agcgttgccc gagcatcttt caaaggattt
     1741 gttcgccagc gccaagccgg tgcgagtcgc cgccgacgag gtgctgtttc tcgccggcga
     1801 caagggcgac ggctgctatc gcatcgagga ggggctgctc aaggtcacca tggtctcgcg
     1861 cgccggcacc gagcgcatcc tcgccttctt cggccccggc gccatcgtcg gcgagctgtc
     1921 gatcatcgac gggctgccgc ggtcggcatc ggtggtagca gtgcggaatt ccgcgctgtg
     1981 ctttctcagc cgcgccgcct tcgacgcatt cgccttgcaa catcccgagc tgtacaaatc
     2041 gctggtcacg ctgctggcga cgcgactgcg cgagaccgac ctggtgatcg ccgccggaag
     2101 tttcctgccg ctcaagggcc gcgtcgccac gacactgctc gagctggcgg agaatttcgg
     2161 ccaggatgtc ggcgccggcc gcatcgtcat ccgccagaag atcgggcaga gcgaccttgc
     2221 ggccatggcc ggcatcgcgc gcgagaatgt gagccgcatc ctaaacgact ggaagcgccg
     2281 caagctggtc agccggcttt ccggctacta ctgcctcgag aacaaggcgc agctgcaaac
     2341 cgaagccgag ctgtagcgac atccgccctg ccccgatgaa cacgcctgcg ctcggcgact
     2401 tccgccgcat catcgtgaaa gtcggctcct cgctcctggt cgatgccaag gccggcgcga
     2461 tcagggagtc ctggctcgca tcgctcacgg cggatctcgc cagcctgcat cgcgacaagc
     2521 gcgacatcct cgttgtttct tcgggagcga tcgtgctcgg ccgcgccgtg ctcaagctcg
     2581 caagcagtcc gctgaaactc gaagacagcc aggctgccgc ggccgtgggc cagatcgcgc
     2641 tcgcgcgcac ctggacggaa gcgctgtcgc gccatggcat cactgctggg caggtgctgg
     2701 tgacgcccgg cgacaccgag gagcgccggc gctacctcaa tgcgcgctcg accatcgaca
     2761 agctcctcga atggcgcgcc gtcccggtga tcaacgagaa cgatacggtt gcgaccaccg
     2821 agatccgtta cggcgacaat gaccggctgg ccgcgcgcgt cgccacgatg gtgagcgccg
     2881 acctcctggt gctcttgtcc gatgtcgacg gactttatga cgcgccgccc gacgcggacg
     2941 cttccgcgcg gcacgtgccg tgcgtcgccc gcgtgacgcc cgagatcgag gcgatggccg
     3001 gcgcggccgg ctcggaactc tcgcgcggcg gcatgcagac caagatcgaa gccgcgcgga
     3061 tcgccaccaa cggcgggacg cacatggtca tcgcctccgg ccgcgtcgaa catccgctgc
     3121 gcgccgtcgc cgagggcgca cgctgcacct ggtttctcac ggccgccaac ccggtcaccg
     3181 cgcgcaagaa atggatcgcc ggcacgttgg aaccgaaggg aaccctggtg atcgatgccg
     3241 gcgcggtcgc ggcgctgcga cgggggaaga gcctgctgcc ggccggaatc gtgcgggtcg
     3301 aaggcgcttt cgcgcgcggc gacgcggtca tcatccgcgg ccccgacggc gcggaaatcg
     3361 ggcgcggcct atccgcctac gatgccgatg acgccgagaa aatccgcggc cgctcgtcag
     3421 ccgacatcgc ctcgatcctc ggcttcagcg gccgcaccga gatggtccac cgcgatgatc
     3481 tggtcgtcgg ccgggaatga cag
//
LOCUS       DATMQB010000111         2145 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3131071, whole genome shotgun sequence.
ACCESSION   DATMQB010000111 DATMQB010000000
VERSION     DATMQB010000111.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2145
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3131071"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..457
                     /locus_tag="VNY79_03510"
     CDS             <1..457
                     /locus_tag="VNY79_03510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HWX71547.1"
                     /translation="VDEETGVVTVDKVWVAHDCGKALNRLTVEGQVQGSVWMGMGQAM
                     SEEAAYHGGLMLTANMLDYRVPTIQDSPPIEVGIVESNDPYGPFGAKEAGEGSLAAFL
                     PALTNAIADATGLRFNDLPVTPDRVFAAIEKRHRLSRSPRGEGARAGGV"
     gene            457..1476
                     /locus_tag="VNY79_03515"
     CDS             457..1476
                     /locus_tag="VNY79_03515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HWX71548.1"
                     /translation="MDALPSFDLIRPRTLDELIRARAQHSGSSLLGGGTDLMVNIRRG
                     IVAPPVLVEINGVSELRGIKADAHTLEIGAAVTLSDLAAHPEMARHYPVVAQAAAHIA
                     GPTHRNMGTVGGNLALDTRCIFYNQSEWWRAANHHCLKTTGEICHVAPKSRGVCFATF
                     SGDLAPALLTLDAEIDIAGPAGRRTMPLADLYIGYARQDEPITETRGDGKFFLSLRPG
                     EIITAARAKNTPGLRSAYDKIRIRRSIEYPVTGVAVALRREGESLADLRVAFTGTNPR
                     PVRLAGTAELCGGALDARAFAGLDALVRDQIMAMKTTFTPGHYRRRVAGVLARRLVQR
                     LFDAL"
     gene            complement(1546..>2145)
                     /locus_tag="VNY79_03520"
     CDS             complement(1546..>2145)
                     /locus_tag="VNY79_03520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HWX71549.1"
                     /translation="STEMFQTFLSNRPGDVRYGTTGKTVPGYDLKIVDEQGREATVDE
                     IGELVVRGPTAGEGYWNQRAKSRRTFAGEWTYTGDKFSRDADGYYHYCGRTDDMFKVS
                     GMWVSPFEVEAALATHEAVLEAAVIGKEDADGLIKPKAFIVLRDGYVMDEHLRETLRV
                     HVKECAGPWKYPRWIDTRPDLPRTATGKIQRFKLREFEG"
BASE COUNT          337 a          742 c          703 g          363 t
ORIGIN      
        1 cgtcgacgag gagaccggcg tggtcacggt cgacaaggtc tgggtggcgc acgattgcgg
       61 caaggcgctc aaccggctca cggtcgaggg ccaggtgcag ggctcggtgt ggatgggcat
      121 gggccaggcg atgagcgaag aagccgccta tcacggcggc ctgatgctta ccgccaacat
      181 gctcgactac cgcgtgccga cgatccagga ttcgccgccg atcgaggtcg gcattgtcga
      241 gagcaacgat ccgtacgggc cgttcggcgc caaggaagcg ggcgaaggct cgcttgcggc
      301 tttcctgccg gcgctgacca atgccatcgc cgatgcgacc gggctgcgct tcaacgatct
      361 gccggtgacg cccgaccggg tctttgccgc gatcgaaaaa cgccaccgcc tttcgcgttc
      421 cccgcgagga gagggcgcaa gagcgggcgg cgtttgatgg acgcgctgcc gtccttcgat
      481 ctcattcgcc cgcgcacgct cgacgagttg atccgcgccc gcgcgcaaca ttcgggcagc
      541 agtctccttg gcggcggcac cgacctgatg gtgaatatcc ggcgcgggat cgtcgcgccg
      601 ccggtgctcg tcgagatcaa cggcgtcagc gaactgcgcg gcatcaaggc ggacgcccat
      661 acgcttgaga tcggcgccgc ggtgacgctc tccgatcttg ccgcgcatcc ggaaatggcg
      721 cgccactacc cggtggtggc gcaggcggct gcgcatatcg ccggcccgac ccaccgcaac
      781 atggggacgg tcggcggcaa tctcgccctc gacacccgct gcatcttcta caatcagagc
      841 gaatggtggc gggccgcgaa ccatcactgt ctcaagacca ccggcgagat ttgccacgtc
      901 gcgccgaaga gccgcggcgt ctgcttcgcc actttcagcg gcgacctcgc cccggcgctg
      961 ctgacgctcg acgccgagat cgatattgcc ggaccggccg gccgccggac catgccgctt
     1021 gctgatctct atatcggcta tgcgcgccag gacgagccga tcacggagac gcgcggcgac
     1081 ggcaaatttt tcctgtcgct gcgcccgggc gagatcatca ccgcggcgcg ggcgaaaaac
     1141 acgcccggac tgcgctcggc ctacgacaag atccgtatcc gccgctcgat cgaatatccg
     1201 gtcaccggcg tcgccgtggc gctgcggcgc gagggagaga gtctcgcgga tctgcgcgtc
     1261 gccttcaccg gcaccaatcc gcgcccggtg cggctcgccg gcaccgccga actctgcggc
     1321 ggcgcgctcg atgcgcgggc cttcgccggg ctcgacgctc tcgtgcgcga ccagatcatg
     1381 gcgatgaaga cgacgttcac gcccggccat taccgccggc gcgttgccgg cgttctggcg
     1441 cggcgcctgg tgcagcggct gttcgacgcg ttgtaggtcg cttcgcgccg tcgccgtacc
     1501 cttcgacgct catcgccgtg caacgcgcgc gtcggggtga cggtatcagc cctcgaattc
     1561 ccgcagcttg aaccgctgaa tctttcccgt ggcggtgcgc ggcaggtcgg gccgggtatc
     1621 gatccagcgt ggatacttcc acggtccggc gcattccttc acgtgcacgc ggagcgtctc
     1681 cctgagatgc tcgtccatga catagccgtc gcgcagcacg atgaaggcct tcggcttgat
     1741 caggccatcg gcatcctcct tgccgatgac agcggcctcg agcaccgcct cgtgcgtagc
     1801 gagcgcggcc tcgacctcaa acggcgacac ccacatgccg ctcaccttga acatgtcgtc
     1861 ggtgcgcccg cagtaatgat agtagccgtc ggcgtcgcgg gagaacttgt cgccggtgta
     1921 ggtccattcg ccggcaaagg tgcgccggct cttggcgcgc tggttccagt aaccctcgcc
     1981 ggcggtgggc ccgcgcacga ccaactcgcc gatctcgtcc accgtcgcct ctcgcccctg
     2041 ctcatcgacg atcttgaggt cgtaaccggg aaccgtcttg cccgtggtgc cgtagcggac
     2101 gtcgcccggc cgattgctga gaaaggtctg gaacatctcg gtcga
//
LOCUS       DATMQB010000112         7240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3131292, whole genome shotgun sequence.
ACCESSION   DATMQB010000112 DATMQB010000000
VERSION     DATMQB010000112.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7240
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3131292"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            16..645
                     /locus_tag="VNY79_03525"
     CDS             16..645
                     /locus_tag="VNY79_03525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71550.1"
                     /translation="MRIQRWDDHRYYHHSRINQSLHFVSAISFLFSYVMIFKDPAIAA
                     LAGWLVAMTTRQAGHFFFEPRDYDVVNEATHEHKEEIKVGYNLRRKVVLLSVWALSPL
                     PLYFDPTFFGIFTPHASKTEFVRHVAEIWLAIGVGGVLFRTLHLFLIKDVQTGLVWAT
                     KILTDPFHDIKLYHKAPLALLRGELIDPGIRATWDEHEADEAEEAPRPT"
     gene            complement(849..2498)
                     /locus_tag="VNY79_03530"
     CDS             complement(849..2498)
                     /locus_tag="VNY79_03530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class III-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HWX71551.1"
                     /translation="MGGAALATSLVTLRRRLELSHAKHASLAGHARIARRLAALVPFY
                     EYDEAQFFNSDGAPVDIAARRRAGFERLSALYATRFAETIRCSAEAAASISDLQFTDA
                     YRVPFQYSGYARARLPSAAFVQSSDGVTVTDLDGNRFYDLTGSYGVNVLGYDFYKEAI
                     ERGAARVRALGPVLGPYHPLIAENVAMLKEISGLDEVSFHMSGTEAVMQAVRLARYHT
                     RRTHLVRFCGAYHGWWGDVQPGIGNPLPAHETYTLRDLSEDSLRVLQTRRDIACVLVN
                     PLQALHPNAGAPSDSALLDSARRAHFDKVAYGNWLKRLRAVCTEQNIVLVFDEVFVGF
                     RLARGGAQEYFDVRADLVTYGKTLGGGLPIGVVCGRCDLMKRFRSDRPADICFARGTF
                     NSHPYVMAAMNEFLRHLHTPQAEGLYRDLDRTWNERAQRLNQRLRAEALPVAVANMSS
                     IWTVCYEQPSRYNWMFQYYLRAEGLALSWVGTGRLIFSLNYTNADFDAVVDRFVAAAK
                     AMEQDGWWWGNPAVANRSIKGAILKEMIAHRLFPERGGNWR"
     gene            2570..3436
                     /gene="asd"
                     /locus_tag="VNY79_03535"
     CDS             2570..3436
                     /gene="asd"
                     /locus_tag="VNY79_03535"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259710.1"
                     /note="Phosphatidylserine decarboxylase is synthesized as
                     a single chain precursor. Generation of the pyruvoyl
                     active site from a Ser is coupled to cleavage of a Gly-Ser
                     bond between the larger (beta) and smaller (alpha chains).
                     It is an integral membrane protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="archaetidylserine decarboxylase"
                     /protein_id="HWX71552.1"
                     /translation="MTVRSELLRVLQQEDINFLLTNRIPRRLVTQFIGWFSRIEQPLV
                     RDLSIGTWRLFSDLDLREAKKTSFRSMHDCFVRELKDGARPIDGRADVLVSPCDAIVG
                     ACGAIAGTRLYQAKGFPYALGELLPERDLVEAHRNGRYVTLRLTASMYHRFHAPHDCR
                     VERVVYVSGDAWNVNPIALRRIERLFCKNERAIVSTRLAAGGHPVTLVAVAAILVASI
                     RLRCLDVLLNLRHRGPNVIACDASYRKGEELGWFEHGSTIIVFAPAGFTLCDNVRDGA
                     TVRVGEPLMRLP"
     gene            complement(3459..4082)
                     /locus_tag="VNY79_03540"
     CDS             complement(3459..4082)
                     /locus_tag="VNY79_03540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007773369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HWX71553.1"
                     /translation="MANELVLYTNPRSRGRIARWMLEEVGQPYRTEILDFATTMKAPA
                     YLAINPMGKVPALRHGDAVVTETAAICAYLADAFPQTGLAPPPGDRLRAPYYRWMFFT
                     AGPMEAATSNKAMGFAVPPEREGMMGYGSYDRAMKVLEEAVSRGDYLVGGTFTAADVY
                     VGSHVGFGLMFGTLEKRPAFQQYWQRLSARPAYARARELDEAPQAKP"
     gene            complement(4169..4858)
                     /locus_tag="VNY79_03545"
     CDS             complement(4169..4858)
                     /locus_tag="VNY79_03545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008133403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HWX71554.1"
                     /translation="MSAAPLRVLVVDDEPPIRKLLRMGLTAQGYQTLEAANGKAALDL
                     LKEAPDLIILDLGLPDTLGHDLLRTIRARNEGVPVIVLSSRGDEASKVQALDLGADDY
                     VTKPFGMDELLARMRAALRHQLQTHGERPVFRLGDLSVDLVRRIVKVGTREVKLSPKE
                     YDLLRVLVQHAGKVLTHKFLLGELWDDLTDAQYLRVYVRQLRQKIEADPEQPQYILTE
                     TGIGYRLRALD"
     gene            complement(4855..>7240)
                     /locus_tag="VNY79_03550"
     CDS             complement(4855..>7240)
                     /locus_tag="VNY79_03550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HWX71555.1"
                     /translation="VDELAHTNVEGSRHPKRYLDVEELLGRGIDVYTTVNIQHIESLN
                     DVVAQITHVRVRETVPDAVFDRADAVELVDLTPDDLIQRLKEGKVYFPKQAERALEHF
                     FSPANLTALRELALRRTAERVDEQLLTEMQAHAIQGPWAAGERILVCISEDPRCAGLV
                     RYAKRLADRLHGPWVALSVEGRRALQLSEEERDRIADTLRLAEALGGEAVTLPASERP
                     IADDVIGYAQANNVTQIVIGKSARTRWFEIIHGSVVHDLVRRSGNISVHVIAGDTIAG
                     EPIPKKSIRAAKRDDAFDARPYVFALLAVAVALGCSEAIQPWVGVENVDLVFLTGVVG
                     VAVRFGLWPSLFASVASSLAYNFFFLPPIYTFTITDPTNVAAFVFLTVVAVIVSTVAA
                     RGRTQTLTATDRARTTESLYSFSRKLAGAGTLDDVLWATAYQTALMLKVRVVLLLPDD
                     GSIAVKAGYPPEDILDDADIAAAKWAWENNRAAGRGSDTLPGAKRLFLPMHTGRGAIG
                     VMGIDSDKPGPLLTPDQRRLLDALRDQGALAIERVKLVEEMDRVERAVETERLRSALL
                     TSISHDLKTPLAAVLGAAGTLREFGQKLGDAEKADLLATIIDESERLNRFIANLLDMT
                     KLESGAVTPNVALHDIGEIIGSALRRASRILSRHKIALELAPNLPMLELDAVLFEQAL
                     FNLLDNAAKYAPPETTIRIQDWRNGDSVCLRVLDEGGGIPPNDLEHIFDKFYRAQKTD
                     QVRAGTGLGLAISRGFVEAMHGTIVAANRSDRSGAAFTISLPIPRQGQRLDAAA"
BASE COUNT         1234 a         2368 c         2396 g         1242 t
ORIGIN      
        1 ggattccgcg aggcactgcg aattcagcgc tgggacgatc atcgctacta tcatcacagc
       61 cgcatcaatc aatcgctcca cttcgtcagc gcgatcagct ttctgttctc ctatgtgatg
      121 atcttcaagg acccggcgat cgcggcgctc gccggctggc tggtggcgat gaccacgcgg
      181 caggccgggc atttcttctt cgagcccagg gactacgacg tggtcaacga ggcgacccac
      241 gagcacaagg aagagatcaa ggtcggctac aatctccgcc gcaaagtggt tctgctgtcg
      301 gtgtgggcgc tgtcgccgct gccgctctac ttcgacccga ccttcttcgg cattttcacg
      361 ccgcacgcga gcaagaccga gttcgtccgc catgtcgcgg agatctggct cgccatcggc
      421 gttggcggcg tgctgttccg caccctccat ctgttcctca tcaaggacgt gcagaccggc
      481 ttggtgtggg cgaccaagat cctcactgac ccgttccacg acatcaaact ctaccacaag
      541 gcgccgctgg cgctgctgcg cggcgagttg atcgaccccg gcattcgcgc gacctgggac
      601 gagcacgaag cggacgaagc cgaagaggcg ccgcggccga cctgagcggc ggccgtcatg
      661 ccgcaatccc ggggcgcggg tcgaaggatg cggctgatgc ttggccacag tccgatcaag
      721 ccacccaatt tccgctcatt cccgcgtaag cgggaatcga gaggcggacc gccgacattg
      781 cgacaagcct gctgggtccc cgctttcgcg gggacgaacg ctcagagtag tcggatcgat
      841 cttgtaaatt agcgccagtt cccgccgcgc tcaggaaaca accgatgggc gatcatctcc
      901 ttcaggatcg cccccttgat cgagcggttg gccaccgccg gattgcccca ccaccagccg
      961 tcctgctcca tggccttggc ggcggcgacg aagcgatcca cgaccgcgtc gaaatcggcg
     1021 ttggtgtagt tgaggctgaa gatcaggcgg ccggtgccga cccagctcag cgccagccct
     1081 tcggcgcgca gatagtattg gaacatccag ttgtagcgcg acggctgttc gtagcagacg
     1141 gtccagatcg aggacatgtt ggcgaccgcg accggcagtg cttcggcgcg caggcgctgg
     1201 ttgagccgct gcgcccgttc gttccaggtg cggtcgaggt cgcggtagag tccctctgcc
     1261 tgcggcgtat gcaaatgacg gagaaattcg ttcatcgccg ccatgacgta gggatgcgaa
     1321 ttgaatgtgc cgcgggcaaa gcagatgtcg gccggacgat cgctgcggaa acgcttcatg
     1381 agatcgcagc ggccgcagac gacgccgatg gggagcccgc cgccgagcgt ctttccgtag
     1441 gtaacaagat cggcgcgcac gtcgaaatac tcctgcgctc cgcctcgggc gaggcgaaag
     1501 ccgacaaaca cttcatcgaa gaccaggacg atgttctgct cggtgcaaac ggcgcgcagg
     1561 cgcttgagcc agttgccgta ggccaccttg tcgaaatggg cgcgtcgcgc gctgtcgagc
     1621 agcgcggaat cgcttggcgc ccctgcgttc gggtgcagcg cctgcagcgg attgaccagc
     1681 acgcaggcga tgtcgcgccg cgtctgcagc acccgcaacg agtcctcgga cagatcgcgc
     1741 agcgtatagg tctcgtgcgc gggcagcggg ttgccgatgc ccggctgcac gtcgccccac
     1801 cagccatggt aggcaccgca gaatcgcacc agatgcgtgc gccgcgtgtg gtagcgcgca
     1861 agccgcaccg cctgcatgac ggcctcggta ccggacatat ggaaagagac ctcgtcgagg
     1921 cccgaaatct ccttcagcat cgcgacgttc tcagcgatca aaggatgata agggccgagc
     1981 accggcccga gcgcgcgcac ccgggcggcg ccgcgctcga tcgcctcctt gtagaagtcg
     2041 tagccgagga cgttcacacc gtaggagccg gtgaggtcgt agaaacggtt gccgtcgaga
     2101 tcggtgacag tcacgccatc gctcgactgc acgaaggcgg cggagggcag gcgggcgcgc
     2161 gcgtagccgc tgtactggaa cggcacgcgg tacgcgtcgg tgaactgcag gtcggaaatg
     2221 ctggcggcgg cctcggcgct gcaccggatg gtctcggcaa agcgcgtcgc atagagcgcc
     2281 gagagccgct cgaatccggc gcggcggcgc gcggcaatgt cgacgggcgc tccgtcggaa
     2341 ttgaagaatt gcgcctcgtc gtattcgtag aacggcacca gggccgcgag ccgccgcgcg
     2401 attcgcgcat ggccggcaag ggaggcgtgc ttggcgtgcg acagctcgag ccgtcggcgc
     2461 aacgtcacca gcgaggtcgc aagcgccgcc ccgcccattc catagagcgc cagtgtcgtc
     2521 gtggcccact ccatcgaatc gcggtgtacc cggcggagtt gacagcgcca tgacggtccg
     2581 ttccgagctt ctgcgcgtcc tgcagcagga ggacatcaat ttcctgctca ccaaccgcat
     2641 tccgcgccgg ctggtcacgc aattcatcgg ctggttcagc cgcatcgagc agccgctggt
     2701 gcgtgatctg tcgatcggca cgtggcgcct cttttccgat ctcgacctgc gggaggcgaa
     2761 gaaaacgagc ttccgcagca tgcacgattg cttcgtccgc gaactcaagg acggcgcgcg
     2821 tccgatcgac ggtcgggcgg acgtcctggt gagcccgtgc gacgccatcg tcggcgcttg
     2881 cggcgcaatc gccggcaccc ggctctacca ggccaaggga tttccgtacg cgctcggcga
     2941 actcctgccc gagcgcgacc tcgtggaagc gcaccgcaac ggccgctatg tcacgctgcg
     3001 gctcaccgcg agcatgtatc accgcttcca tgcgccgcac gactgccgcg tcgaacgcgt
     3061 cgtctacgtg tcgggcgacg cctggaacgt caatccgatc gcgctcaggc ggatcgagcg
     3121 gctattctgc aagaacgaac gcgccatcgt gagcacccgg ctcgcggccg gcggccatcc
     3181 ggtgacgctg gtcgcggtcg ccgccatcct ggtcgccagc atacgcctgc gttgtctcga
     3241 cgtgctgctc aacctgcgcc atcgcggccc caacgtcatc gcctgcgatg cgagctaccg
     3301 caagggcgag gagctgggct ggttcgagca cggctcaacg atcatcgtct tcgcgcccgc
     3361 aggtttcacg ctatgcgaca atgtccgcga cggcgccacg gttcgcgttg gcgagccgct
     3421 gatgcggttg ccctgagatt ttgcggccgg cccgcggcct acggcttcgc ctgtggcgcc
     3481 tcgtcaagct cgcgcgcgcg ggcgtaggcc ggacgcgcac tgagcctttg ccaatattgc
     3541 tggaacgccg gacgcttctc gagcgtgccg aacatcaggc caaatccgac gtgcgagccg
     3601 acatagacat ccgccgccgt aaacgtcccg ccgaccaggt aatcgccacg cgacaccgcc
     3661 tcttcgagca ccttcatcgc tcgatcgtag ctgccgtagc ccatcatgcc ctcgcgttcg
     3721 ggcggcaccg cgaaacccat cgccttgttg ctggtcgccg cctccatcgg cccggcggtg
     3781 aagaacatcc aacggtaata aggggcgcgc agccggtcgc ctggcggcgg cgccagcccg
     3841 gtctgcggaa acgcgtcggc gagataggcg cagatggcgg ccgtctcagt cactaccgca
     3901 tcgccatggc gtagtgccgg caccttgccc atcggattga tggcaagata cgcgggcgcc
     3961 ttcatggtgg tggcgaagtc gagtatctcg gtgcggtagg gctggccgac ctcctcgagc
     4021 atccagcgcg cgatgcggcc gcgcgagcgc ggatttgtgt agagaacaag ttcgttggcc
     4081 atggtcggtc ctcgcctgtc tcgctgatcg cgtgctcaat agccgacgcc gccggttttt
     4141 gcacgcgtca tgtggcacca cgatgcgcct aatcgagcgc gcgcaggcga tagccgatgc
     4201 cagtctcggt gaggatgtat tgcggctgtt cgggatcggc ttcgatcttc tgccgcaact
     4261 ggcgcacata gacccgcaga tattgcgcgt cggtcaaatc gtcccatagc tcgccgagca
     4321 ggaacttgtg cgtgagcacc ttgccggcgt gctgcaccag cacgcgcagg agatcgtatt
     4381 ccttcggcga cagcttgacc tccctggtgc cgaccttgac gatgcggcgc acgaggtcga
     4441 cggaaagatc gccgaggcgg aaaacgggcc gctcgccgtg ggtctgcagc tgatgccgaa
     4501 gcgccgcccg catccgggcg agcagttcgt ccatgccgaa cggcttggtc acgtaatcgt
     4561 cagcgccgag atcgagcgcc tgcaccttgc tcgcttcgtc gccgcggctg gagaggacga
     4621 tgacgggaac gccctcgttg cgcgcgcgga tcgtgcgcag caaatcgtgc ccgagcgtat
     4681 cggggaggcc gagatcgaga atgatcaggt cgggagcctc tttcagcaga tcgagcgcgg
     4741 ccttgccgtt cgcggcctcc agcgtctggt aaccctgcgc ggtcaggccc atgcgcaaca
     4801 gcttgcgtat ggggggctcg tcgtcgacca ccagcacgcg gagcggagct gcactcatgc
     4861 ggcggcgtcc aggcgctggc cttggcgcgg gatcggcagg ctgatggtga acgcagcgcc
     4921 gctgcggtcg gagcggttcg ccgcgacgat ggtcccgtgc atcgcttcta cgaagccgcg
     4981 cgagatggcg agcccgagcc cggtgccggc gcgcacctga tcggtcttct gcgcccggta
     5041 gaacttgtcg aatatgtgct cgagatcgtt cggcggaatg ccgcctccct cgtcaagcac
     5101 gcgcaagcag accgagtccc cgttgcgcca gtcctgaata cggatcgtcg tctccggcgg
     5161 agcgtatttc gcggcattgt cgaggagatt gaacagcgcc tgctcgaaca gcacggcgtc
     5221 gagttcgagc atcggcagat taggagcgag ctcgagcgcg atcttgtggc gcgagaggat
     5281 gcggctggcg cggcgcaacg cgctgccgat aatctcgccg atgtcatgca gcgccacatt
     5341 aggcgtgacc gcgccggatt cgagcttggt catatcgagc aggttggcga tgaagcggtt
     5401 gagccgctcg gattcatcga tgatcgtcgc caggaggtct gccttctccg cgtcgccgag
     5461 cttctgcccg aattcgcgca gcgttcccgc cgccccgagc accgcggcga gcggcgtctt
     5521 caggtcgtgg gagatcgagg ttagcagcgc cgagcgcagc cgctcggtct cgacggcgcg
     5581 ctcgacgcga tccatctcct cgaccagctt gacgcgctcg atcgcgagcg cgccctggtc
     5641 gcgcagcgcg tcaagcagcc gccgctggtc gggcgtcagc aggggaccgg gcttgtcgct
     5701 gtcgatcccc atgacgccaa tggcgccgcg cccggtgtgc atcggcagga acagccgctt
     5761 ggcgccggga agcgtatcgg acccgcggcc ggccgcgcgg ttgttctccc atgcccactt
     5821 cgcggcggcg atgtcggcat cgtcgagaat gtcctccgga ggatagccgg ctttcaccgc
     5881 gatcgatccg tcgtccggca gcagcagcac cacccgcact ttcagcatca gcgcagtctg
     5941 ataggccgtc gcccacagca cgtcgtcgag cgtgccggcg ccggcgagct tgcggctgaa
     6001 cgagtagagc gactcggtgg tgcgggcgcg gtcggttgcc gtcagcgtct gggtgcggcc
     6061 gcgcgcggcg accgtggaga cgatgacggc cactaccgtc aggaacacaa aggccgcgac
     6121 attggtcgga tcggtgatgg tgaaggtata gatcggcggt aggaagaaaa agttgtaggc
     6181 gagcgaagaa gcgacgcttg cgaacagcga gggccacaat ccgaagcgca cggcgacgcc
     6241 gaccacgcca gtcagaaaca ccagatcgac attttccacg ccgacccagg gttgaattgc
     6301 ctctgagcag ccgagcgcaa ccgccaccgc cagaagcgcg aacacatatg gccgcgcatc
     6361 gaacgcgtcg tcacgtttgg cggcgcggat cgacttcttc gggatcggct cgccggcaat
     6421 cgtgtcgccg gcgatcacgt gaacgctgat gttgccggag cggcggacga ggtcgtgcac
     6481 caccgaacca tggatgatct cgaaccagcg cgtgcgcgcg gacttcccga tcacgatctg
     6541 ggtaacgttg tttgcctggg cgtagccgat gacgtcgtcg gcgatgggtc gctcgctcgc
     6601 cggaagcgtc accgcttcgc cgccgagcgc ttcggcgagc cgcagcgtgt cggcgatgcg
     6661 gtcgcgctcc tcctctgaaa gctgcagcgc gcgccgccct tcgacagaga gcgccaccca
     6721 cggcccatgc aggcggtcgg cgagccgctt ggcatagcgc acgagtccgg cgcagcgcgg
     6781 atcttcgctg atgcacacca ggatgcgttc gcccgccgcc cacggtccct ggatggcgtg
     6841 cgcctgcatc tcggtgagca attgctcgtc gacgcgctcc gcggtgcgcc gcagggcgag
     6901 ctcgcgcaat gccgtcaggt tggcgggaga gaagaagtgc tcgagcgccc gctcggcctg
     6961 cttcggaaag taaaccttcc cttccttgag ccgctggatc aggtcgtcgg gcgtcagatc
     7021 gaccagttcg accgcgtcgg cgcggtcgaa cactgcgtcc gggaccgtct cgcgtacccg
     7081 cacatgcgtg atctgcgcca ccacgtcgtt gaggctttcg atgtgctgga tgttgaccgt
     7141 ggtgtagacg tcgatgccgc ggcccaacag ctcctcgaca tcgagataac gtttcggatg
     7201 gcggctgcct tcgacgttgg tatgcgcgag ctcgtcgacc
//
LOCUS       DATMQB010000113        13129 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1276069, whole genome shotgun sequence.
ACCESSION   DATMQB010000113 DATMQB010000000
VERSION     DATMQB010000113.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 13129)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13129)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13129
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1276069"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1584
                     /locus_tag="VNY79_03555"
     CDS             <1..1584
                     /locus_tag="VNY79_03555"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HWX71556.1"
                     /translation="SLPTMLLDTCMRHAARAAFECLDTRMGYAEWERASRAFAAFLVE
                     QAKCRPGERVGIMLPNLIAYPVVFFAVLRAGLIVVNVNPLYTPRELKEQLADSGATVI
                     VIMENFAHKLESVIAETQIRHVVVARLGDFMPALKRTLFNFVNARIRRAVPPWRFASF
                     TMLQAACRRPPGARYADAKPQANAPAVLQYTGGTTGVPKGAILTHRNLVANALQCRAW
                     IEPNLPKEQGSVLTPLPLYHIFSLTANLLAFALMGGLSVLVPDPRDLKRLIRAMGKAH
                     VTTMTGVNTLFNALINTPEFAALDFSKLAFAIGGGAAVQSTVALRWREITGGNLVEGY
                     GLTEASPVVCINPVRRPKLGTVGLPVSSTEVAIRDDAGNDVAVGESGEICVRGPQVMQ
                     GYWQRPDETRLVLAGDGWLRTGDIGAFDAQGFLKILDRKKDMVNVSGFKVFPNEVEDV
                     IAQHPGVLEAAVIGVTDEHTGQAVKLFLVRRDPELQAEELTRYSRERLAAYKVPKLIE
                     FVDSLPKSNIGKIIRKDLR"
     gene            complement(1608..2450)
                     /locus_tag="VNY79_03560"
     CDS             complement(1608..2450)
                     /locus_tag="VNY79_03560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HWX71557.1"
                     /translation="MKSILVPTEHNSAMQSALDTALLLAQKFVGCIEGFALRPAVADM
                     VAMDPDAGLTMIAVKENDAQMVRQAADLFRSFMERHSVVQRADETPATSPCWAWLDAA
                     PSGHDFVGSYGRVFDAIVLARPGEEWQSPSMVTLESALFESGRPVVIAPPDSPRSLGR
                     NVLIAWNASTEQGRATAFAMPLLRLAERVTVVTVEGVTVAGPTGAEMARTLKINGIAA
                     EPITLAAGKRTAGETILAKADELGCDLIVKGAYTQSRLRQMIFGGTTRHILAHAKLPV
                     LMAH"
     gene            2746..3714
                     /locus_tag="VNY79_03565"
     CDS             2746..3714
                     /locus_tag="VNY79_03565"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018266749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004413 - homoserine kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HWX71558.1"
                     /translation="MAVYTDVAAEDLVPFLAGYDIGELMAYKGIAEGVENSNFLVHTS
                     RGYFFLTLYERRVAERDLPFFLALMEHLANRGITCPQPVKNRAGETVGRLAGRPAAIV
                     TFLEGMWIRRPSASHCGALGEALARLHLAGADFAMQRENALSVAGWRQLYAVCRERAN
                     EVQRDLRTVLTAELEQLEREWPRGLPQGVIHADLFPDNVFFLGAKLSGLIDFYFACTD
                     TLVYDVAICLNAWCFEPDHSYNVTKGRALLANYARTRPLSAAEWDKLPLLARGAALRF
                     LLTRLVDWLDVPPGALVRPKDPLEYLRKLRFHQKVKSPADYGVIEP"
     gene            3714..4187
                     /gene="rnhA"
                     /locus_tag="VNY79_03570"
     CDS             3714..4187
                     /gene="rnhA"
                     /locus_tag="VNY79_03570"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI"
                     /protein_id="HWX71559.1"
                     /translation="MAQLPHVVIHTDGACSGNPGPGGWGAILAFGDREKELKGGEALT
                     TNNRMELMAAISALEALKRPCRVDLHTDSQYLRNGVMSWMGTWKRNGWRTADKKPVKN
                     VDLWQRLEAALAPHQVRWHWLRGHAGHVMNERADALAREAIAQIRNAGGAAAQGR"
     gene            4316..4810
                     /locus_tag="VNY79_03575"
     CDS             4316..4810
                     /locus_tag="VNY79_03575"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71560.1"
                     /translation="MIESLMLLGIGVCAGCLLVLAFIPLVHRRATRITTRHMDDATPL
                     AINAIQADKDRLRAEFATSVRRLEVGVEEMRTKAAGHLGEIGRQKMEIQRLRLELDKK
                     MALVFALRYRDKVRKSIVRRLAKLVFYAFIRSERRTRRELFGMVQARSLAHARRAHMA
                     GSQT"
     gene            complement(4912..5397)
                     /locus_tag="VNY79_03580"
     CDS             complement(4912..5397)
                     /locus_tag="VNY79_03580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003600710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HWX71561.1"
                     /translation="MTIKVGDRLPEAKFRVMGPDGPAVKSTADIFKGKKVVLFAVPGA
                     FTPTCNNNHLPGFLQNADAFKKKGIDTIAVTGVNDVFVMDAWKKASGASGKIEFLSDG
                     NGEFAKALDMTLDGSGFGLGTRSKRYAMLVDDGVVKKLNVEEVAGKAEVSGAENLLNQ
                     I"
     gene            complement(5488..6282)
                     /locus_tag="VNY79_03585"
     CDS             complement(5488..6282)
                     /locus_tag="VNY79_03585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-disulfide reductase DsbD
                     domain-containing protein"
                     /protein_id="HWX71562.1"
                     /translation="MARAQDSSAWDAEPHAAARLIAGAALRSADAAWLRAGIEIRLDT
                     GWKTYWRYPGDSGVPPTLDFAGSENVKSVTVLWPAPTRFADGAGGHSIGYHGDVVLPL
                     RVLANDAAKPAALHLKLSYAVCSNLCVPVEAELDLALSGKRGAEEATLVAAEARVPRR
                     AALGAGSAAGGLAIRSARRERGGAGERVVVEVAAPAGTPVDLFAEGPAADWALPLPEA
                     SGGGAGTRRFTFDLDGLPPGAHVDGATLTLTATSPDDAIEVPVHLD"
     gene            6610..7233
                     /locus_tag="VNY79_03590"
     CDS             6610..7233
                     /locus_tag="VNY79_03590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HWX71563.1"
                     /translation="MKLPRGASGKNRGRGRGYLDGQMLIAMPAMMDERFARSLIYVCA
                     HSSEGAMGIVVNHPAPNINFSDLLVKLDVIPAADIIRLPSRAGVVKVMRGGPVETERG
                     FVLHSADFFIENSTLPIDDGICLTATIDILKAIARGDGPASAILALGYAGWAPGQLEN
                     EITGNGWLHCAADPELIFGTDIGGKYEKAMKKIGIDLGMLSSEAGHA"
     gene            complement(7284..10112)
                     /locus_tag="VNY79_03595"
     CDS             complement(7284..10112)
                     /locus_tag="VNY79_03595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HWX71564.1"
                     /translation="MLGVSAAGAVEAVNVRLDASAIDLTDAIELLRAEADRVQVSTAP
                     GADGIVRRIEVRGREAGNYWAVFALANDGDEQIDRLIAAPHYRMVGSGLLWPDLGLSR
                     IVYITPSSGDPPERLESPTADVFRITLDPGTVITFVAELRTPNLPQLYLWEPDAYKDK
                     VNSLTLYQGIVIGIAGLLALFLTILFVVKGSIMFPAAAALGWAVLIYIGVDFGFWGKV
                     FDMSSGAERIWRASGEAILAATLLVFLFAYLNLNRWHVRYAHITVGWLAFLGALVAVA
                     LFSPAIASGIARISLFLVAVLGFGLVVYLSTHGFDRAVMLIPTWLLLVVWVIGAALTA
                     LGFLTNDVVGPALLGGLVLIVMLIGFTVMQHAFAGGITQPLVSDVERRALALTGAGDM
                     IWDWDVSADKVFTSPECEAMLGLKSGSLDGAAARWLEVLHPLDRDRFRATLDSVVEQR
                     RGRVAQDFRLRTFDGHYVWLALRARPVVGSDGEVIRLVGTLTDVTEFKTVEERLLHDA
                     VHDNLTGLPNRELFIDRLESALGFAKADPTIRPAVMVVDLDRFKQVNDSVGMAIADSI
                     LLTLARRLGRLIKPQDTLARLSGDQFGLLLLSERDSSRVIAHAETIRRTLRAPITFND
                     REIVLTGSIGLTLGDGDAQRGDERLKDAELAMYHAKRIGGDRIDVFKPAMRSRKVDRL
                     SLESDLRRAIEREEITILYQPIVRLDDRVVAGFEALARWNHPRLGRMAPGEFITIAEE
                     TGLIVQLGLFVLERTARQLSIWQRALRQRDPVFASVNVSSRQLLRHDLIQDLRTVLAR
                     APLARGTLKLELTESVVMDNPEHAAQMLHRIRELGAGLALDDFGTGYSSLAYLQRFPF
                     DTIKIDQSFVRTTAKGTRPVILRSIIALAHDLGMDVVAEGAETDSDAVELFQLGCEYA
                     QGFVFGEPMPPEHARDLLQSRGSVEFAR"
     gene            complement(10359..11357)
                     /locus_tag="VNY79_03600"
     CDS             complement(10359..11357)
                     /locus_tag="VNY79_03600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-quinone oxidoreductase"
                     /protein_id="HWX71565.1"
                     /translation="MTTLPDRMTVIAIRSPGGPDVLVPEQRPTPTPGAGEIMVKVAAA
                     GVNRPDVMQRMGLYPPPPGATDIPGLEIAGEVLARGAGATRWKDGDKVMALVVGGGYA
                     EYCLAHESHALPIPADLSPIAGAAIPETFFTVWHNAFERGRLAAGETLLVHGGSSGIG
                     TTAIQLAKAFGARVIATAGTAEKCAACRELGADDAVNYKTEDFVAATKKATDGRGADV
                     ILDMVGGSYIERNYEAAAVEGRVVQIAFQSASHADVDFRRLMFKRLTHTGSTLRARAI
                     ADKAAIARAVEDRVLPLIAGGRVKPVIDSTFPLREAAKAHARMETSQHIGKIVLTL"
     gene            11457..11651
                     /locus_tag="VNY79_03605"
     CDS             11457..11651
                     /locus_tag="VNY79_03605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1192 domain-containing protein"
                     /protein_id="HWX71566.1"
                     /translation="MPAIDPDDLPKKKITHEIGQDLALLSVGELAERIGLLREEIVRL
                     EAEMARKRVSQTAADAFFKK"
     gene            12005..12526
                     /locus_tag="VNY79_03610"
     CDS             12005..12526
                     /locus_tag="VNY79_03610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1465 family protein"
                     /protein_id="HWX71567.1"
                     /translation="MSEKRLSDAGAVSFSERLASSQIFATLFRDGMALVEETATYLDG
                     SGRNESKKLERSAAMVYATESMRLTTRLMQLASWLLLHRAVKEGEMTLAQASKEKSKV
                     RLAACDPGDAKSIALLPGKLQELIVRSVKLQAEVRRLDATMHASAPLQVAVGNPVERQ
                     LGLLKAAFEQDGP"
     gene            complement(12577..12801)
                     /gene="rpmE"
                     /locus_tag="VNY79_03615"
     CDS             complement(12577..12801)
                     /gene="rpmE"
                     /locus_tag="VNY79_03615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L31"
                     /protein_id="HWX71568.1"
                     /translation="MKSEIHPDYHLVTVIMTDGTEFTTRTTWGKPGDTLHLDIDPKSH
                     PAWTGGQQHLIDRGGRLSRFQKKFSGFLKK"
BASE COUNT         2195 a         4303 c         4405 g         2226 t
ORIGIN      
        1 tcacttccga cgatgctgct cgatacgtgc atgcgccatg ccgctcgcgc ggcgttcgaa
       61 tgcctggaca cgcgcatggg ctacgccgag tgggaacgcg ccagccgcgc ctttgcggct
      121 ttcctcgtcg agcaggcgaa atgccggccg ggcgagcgcg tcggcatcat gctgccgaac
      181 ctcattgcct atccggtcgt cttcttcgcg gtgctgcgcg ccggcttgat cgtcgtcaac
      241 gtcaatccgc tgtacacgcc gcgcgaactg aaagagcagc ttgccgattc cggtgcgacc
      301 gtcatcgtca tcatggagaa tttcgcccac aagctcgaat cggtcatcgc cgagacgcag
      361 atccggcacg tggtggtggc tcggctcggc gatttcatgc ccgcgctcaa gcgcacgctg
      421 ttcaatttcg tcaacgcgcg catcaggcgc gcggtgccgc cgtggcgctt tgcgagtttc
      481 acgatgctgc aggcggcctg ccgccgtccg ccgggcgcgc gctatgccga cgccaagccg
      541 caggcgaatg cgccggcggt gctgcaatac accggcggca ccacgggcgt gccgaagggc
      601 gccatcctca cgcaccgcaa tctcgtcgcc aacgccctgc agtgccgcgc ctggatcgaa
      661 ccgaatctgc cgaaggagca ggggagcgtg ctgaccccgc tgccgctgta tcacatcttc
      721 tcgttgacag cgaacctatt ggctttcgcg ctcatgggcg gattgagcgt gctcgttccc
      781 gacccgcgcg acctcaagcg gctcatccgc gccatgggca aggcgcacgt caccaccatg
      841 accggcgtca acacgctgtt caacgcgctg atcaacacgc cggaattcgc ggcgctcgat
      901 ttcagcaaat tggccttcgc catcggcggc ggcgccgcgg tgcaaagcac ggtggcgctg
      961 cgctggcgcg agatcaccgg cggcaatctg gtcgagggct atggcctgac cgaggcctct
     1021 ccggtcgtgt gcatcaatcc ggtacgccgc ccgaagctcg gcactgtcgg gctgccggtc
     1081 tcgtcgaccg aggtagcgat ccgcgacgac gccggcaacg acgtggccgt gggcgagtcc
     1141 ggcgagatat gcgtgcgcgg gccgcaggtc atgcagggct actggcagcg acccgacgag
     1201 accaggctcg ttctcgctgg cgacggctgg ctgcgcaccg gcgatatcgg cgcgttcgac
     1261 gcgcaggggt tcttgaaaat cctcgatcgc aagaaggaca tggtcaacgt ctccggcttc
     1321 aaggtatttc ccaatgaagt cgaggacgtg atcgcccagc atccgggcgt gctcgaagcc
     1381 gccgtgattg gcgtcaccga cgagcatacc gggcaggccg tgaagctgtt cctggtcagg
     1441 cgcgatccgg aactgcaggc cgaggagcta acgcgataca gccgcgagcg gctcgccgcc
     1501 tacaaggtgc cgaagctgat cgagttcgtc gacagtctgc ccaagagcaa tatcggcaag
     1561 attatccgca aggacttacg ctgacccgca gcctcgctcc gccgcgctca atgcgccatc
     1621 agcaccggca gcttggcgtg agcgaggatg tggcgcgtgg tgccgccgaa gatcatctgc
     1681 cgcagtcggc tttgcgtgta ggcgcccttg acgatgagat cgcagccgag ctcgtcggcc
     1741 ttggcgagga tcgtttcgcc ggcggtgcgc ttgccggccg cgagcgtgat cggttcggcg
     1801 gcgatgccgt tgatcttgag cgtgcgcgcc atctcggcgc cggtcgggcc ggcgacggtg
     1861 acgccctcca cggtgacgac ggtgacccgc tcggcgagcc gcagcagcgg catggcgaac
     1921 gcggtggcgc gcccctgctc ggtgctggcg ttccacgcga tcagcacgtt cctgccaagc
     1981 gagcgcggcg aatccggagg ggcgatgacc acggggcgtc cgctttcgaa cagcgccgat
     2041 tcgagcgtga ccatcgacgg gctctgccat tcctcgcccg ggcgcgccag cacgatggca
     2101 tcgaacacgc gtccatagct gccgacgaag tcgtgtccgc tcggcgcggc gtcgagccac
     2161 gcccaacacg gcgatgtcgc cggcgtctcg tcggcgcgtt gcacaacgct gtggcgctcc
     2221 atgaacgagc ggaacaggtc ggcggcctgc cgcaccatct gcgcatcgtt ctccttgacg
     2281 gcgatcatgg tcaggccggc gtcgggatcc atggccacca tgtcggcgac ggccggtcgc
     2341 agcgcaaagc cctcgatgca accgacgaac ttctgtgcca gcagcagcgc cgtgtccaag
     2401 gccgactgca tcgcggaatt gtgctcggtg ggaacgagaa tgctcttcat gcgcacatcc
     2461 cgcatgtccg cgacgaagcg gcaacacacg ccacccggcg cgttctcatc cgcgcaattg
     2521 tgccgcgcgg gcgcttgctc gacaagctcc ccgcagcgcg aacagcgcac gagcggcggt
     2581 gcatcatacg gcgaaccggc ccgatcaagg gcgtgcgcgt tgccttccgc acatgcccac
     2641 ccggctcaaa tcgcgccgtc ctgcgttgct tgcgttgcgg cttgcggccg gtcgtcttga
     2701 cgcggatgtg ccgctcgcgc tagccgcgca cggctggaga ttctcatggc ggtctatacc
     2761 gatgttgcgg cggaagacct cgtacccttc ctcgccggtt acgacatcgg cgagctcatg
     2821 gcttacaagg gcatcgccga gggcgtcgaa aactcgaatt ttctggtcca caccagccgc
     2881 ggctacttct tcctgacgct ttacgagcgg cgggtggccg aacgcgacct gccgttcttt
     2941 ctggcgctca tggagcatct ggcgaaccgc ggcatcacct gcccgcagcc ggtcaagaac
     3001 cgcgccgggg agacggtggg ccggctcgcc ggccggcccg cggccatcgt caccttcctc
     3061 gagggcatgt ggattcggcg cccgagcgcc tcgcattgcg gggcgctggg agaggcgctg
     3121 gcgcggctgc atctcgccgg ggccgacttc gccatgcagc gcgagaacgc gctgtcggtc
     3181 gccggctggc ggcagctcta cgcggtctgc cgcgagcggg cgaacgaggt gcaacgcgac
     3241 ctcaggacgg tgctcaccgc cgaactcgaa cagctcgaac gcgaatggcc gcgcggactg
     3301 ccgcagggcg tcatccacgc cgacctgttt cccgacaacg tctttttcct cggcgccaag
     3361 ctctccgggc tgatcgattt ctatttcgcc tgcaccgaca cgctggtcta cgacgtggcc
     3421 atctgcctca acgcctggtg cttcgagccg gatcattcct acaatgtcac caagggccgc
     3481 gcgctgctcg ccaattacgc ccggacccgg ccgctctcgg ccgcagagtg ggacaagctg
     3541 ccgctgctcg cgcgcggagc ggcgctgcgc tttctgctca cgcggctggt cgattggctc
     3601 gacgtgccgc cgggcgcgct ggtgcggccg aaggacccgc tcgaatatct gcgcaagctg
     3661 cgcttccacc agaaggtcaa gagcccggcc gactacggag tgatcgagcc gtgatcgcgc
     3721 aactgccgca tgtcgtcatc cataccgacg gcgcctgctc gggcaacccc ggccccggtg
     3781 gctggggcgc gatcctggcc ttcggcgacc gcgagaagga gctcaaaggc ggcgaggcgc
     3841 tgaccaccaa caaccgcatg gagctcatgg ccgcgatctc cgcgctcgaa gcgctcaagc
     3901 ggccgtgccg cgtcgatctt cacaccgaca gccaatattt gcgcaacggc gtcatgtcgt
     3961 ggatggggac ctggaagcgc aacggctggc gcaccgctga caagaagccg gtcaagaacg
     4021 tcgacctctg gcagcggctc gaagcggcgc tagcgccaca ccaggtgcgc tggcattggc
     4081 tgcgcggcca cgccggtcat gtcatgaacg agcgcgccga cgcgctggcg cgcgaggcga
     4141 ttgcccaaat ccgcaatgcc ggcggcgccg ccgctcaagg ccgctaggac cgcggctttt
     4201 ccattccggg agcagcgtgc gccgcgccgg ccggtttggg ttaacaggcg gctcttctgg
     4261 aacgaccggt cgcggcgtga caagctcgac ggcgaaccaa catcgtgtcc gtttcatgat
     4321 cgaatcactc atgttgctcg gtatcggggt ctgcgccgga tgcctgctcg tgctggcgtt
     4381 cataccgctc gtgcaccgcc gggccacgcg catcacgacg cggcatatgg acgacgcgac
     4441 gccgctcgcc atcaatgcaa tccaggcgga caaggatcgc ctgcgcgctg aattcgccac
     4501 gtcggtgcgc cgcctcgagg tcggcgtcga agagatgcgg accaaggccg ccggtcatct
     4561 tggggaaatc ggtcggcaaa agatggaaat ccagcggctg cgcctcgagc tcgacaagaa
     4621 aatggcgctc gtctttgcgc tccgctaccg ggacaaggtg cgcaagagca tcgtgcggcg
     4681 gctggcgaaa ctggtgttct acgcattcat ccgctcggag cgccggacca ggcgtgaact
     4741 gttcggcatg gtgcaagcgc gctcgttggc gcacgcccgc cgggcgcaca tggccggcag
     4801 tcagacctga aagcaaccgc tccggcgcgt aacgctgccg gccgccgtcg agcgacaacg
     4861 gccggcgtct tcatcgttcc tcctcacgga ggagggctca ctcaggatgc ctcaaatctg
     4921 attcagcaga ttctccgcac ctgagacttc ggctttgccg gccacctctt cgacgttgag
     4981 tttcttcacc acgccgtcgt cgaccagcat ggcgtagcgt ttggagcggg tgccgagccc
     5041 gaagcctgag ccatccagcg tcatgtccag ggccttggcg aactcgccgt tgccgtcgga
     5101 gagaaattcg atcttgccgc tggcgcccga cgctttcttc cacgcgtcca tcacgaaaac
     5161 gtcgttcacg ccggtgaccg cgatcgtgtc gatgcccttc ttcttgaaag cgtcggcgtt
     5221 ttgcaggaac cccggcaggt gattgttgtt gcaggtcggc gtgaaggcgc cgggaacggc
     5281 gaacaggacc accttcttgc ccttgaatat gtcggcggtg ctcttcaccg ccgggccgtc
     5341 gggccccatc actctgaatt tcgcctcggg caggcggtcg ccaaccttga tggtcatggt
     5401 cgtctcctct cgcgttcggg attgatgatc ggggttggtg tcgtccgctg gcgcgtccgg
     5461 cgccgcaaaa ctatcgcacc gggcgaatta gtcgagatgg accggaacct cgatggcgtc
     5521 gtcgggggaa gtggcggtca acgtcagcgt cgccccatcg acatgcgcgc cggggggcag
     5581 gccgtcaaga tcgaaggtga agcgtcgcgt tcccgcgccg ccgccgctcg cctcgggcag
     5641 cggcagcgcc cagtccgctg ccggcccttc ggcaaaaaga tcgaccggcg ttcccgcggg
     5701 tgctgcgacc tcgaccacga cccgctcgcc cgcgccgccc cgttcgcggc gcgccgagcg
     5761 aatggcgagg ccgccggcgg cactgccggc gccgagcgcc gcgcggcgag gaacgcgcgc
     5821 ttcggctgca acgagcgtcg cctcctcggc accgcgcttg cccgacagcg cgaggtcaag
     5881 ttcggcttcg accggcacgc acaggttact gcacactgca tagctgagct tcaggtggag
     5941 cgcggccggc ttggcggcgt cgttcgcaag gacgcgcaac ggcagtacga cgtcgccgtg
     6001 ataaccgatc gagtggccgc cggcgccgtc cgcgaaccgc gtcggtgccg gccacagcac
     6061 ggtcaccgat ttcacgttct cggagccggc gaaatcgagc gtcggcggta cgccggaatc
     6121 tccgggatac cgccaatagg tcttccagcc ggtgtcgagc cgaatttcga tgcccgcccg
     6181 cagccacgcc gcgtcggccg accgcagcgc ggcgccggcg atgagtcgcg ccgccgcgtg
     6241 cggctccgcg tcccacgcag aagagtcctg cgcgcgcgcc atgccgggta tgcaggggag
     6301 ggcgatagcc gcaatcgtta atagccgact tgccgcgcga agcatcgccg ctgtctagtg
     6361 cgcggcggcc cacacgcgcc actgacatga tcgtgaccat gacatgatca tgaccaagct
     6421 ctctgcgcat ctggcgatgc cggcgcctgg ctgcatccgt gcgcacagaa cgcggctggg
     6481 ctttgacata gagccgcctt accatcgcca tggcctgccg cccactgccg ggcaacgtca
     6541 aggtattggc gtgaactttt gtcgctgcca ttcgtttgca aaagcggatc gatcggctac
     6601 ctttcggcta tgaaattgcc gcgtggcgca tcgggaaaga atcgaggtcg gggccggggt
     6661 tatctcgacg gccagatgct gatcgccatg ccggcgatga tggacgaacg tttcgcccgc
     6721 tctctcatct atgtttgcgc ccattcctcc gagggcgcga tgggtattgt cgtcaaccat
     6781 ccggcgccca acatcaactt ttccgatctg ctggtgaagc tcgacgtgat tccggcagcc
     6841 gacatcatcc gcctaccttc ccgcgccggc gtggtgaagg tcatgcgcgg cgggccggtc
     6901 gaaaccgagc gcggcttcgt gctgcacagc gccgatttct tcatcgagaa ctcgacgctg
     6961 ccgatcgacg acggcatctg cctcaccgct acgatcgaca tcctcaaggc gatcgcgcgc
     7021 ggcgacgggc cggcgagcgc gatcctggcg cttggctacg ccggctgggc cccgggccag
     7081 ctggaaaacg agatcaccgg gaacggctgg ctgcattgcg ccgctgatcc ggagctcatc
     7141 tttggcaccg atatcggcgg caaatacgag aaggcgatga agaagatcgg catcgatctc
     7201 ggcatgctgt cgagcgaggc cgggcacgcg tgagcccgtt ctttccgatt tctgatttgt
     7261 aacgtctgat tccgcgcctc aactcagcgc gcgaactcca cgctgccccg cgactgcagc
     7321 aggtcgcgcg cgtgctcggg cggcatgggc tcgccgaata cgaatccctg cgcgtattcg
     7381 cagccgagct gaaacagctc gaccgcgtcg gaatcggttt ccgccccttc cgccacgacg
     7441 tccatgccga ggtcgtgggc cagcgcaatg atcgagcgca ggatcaccgg tcgcgttccc
     7501 ttggccgtgg tgcgcacaaa agactggtcg atcttgatgg tatcgaacgg aaaacgctgc
     7561 agataggcaa gcgaggaata gccggtgccg aaatcgtcga gggcaaggcc ggcgccgagt
     7621 tcgcggatcc ggtgcagcat ctgcgcggcg tgctccgggt tgtccatcac caccgactcg
     7681 gtgagctcga gcttgagcgt tccgcgcgcg agcggcgcgc gcgccagcac cgtgcgcagg
     7741 tcctggatca ggtcgtggcg cagcagctgc cgcgaggaga cgttgacgct ggcgaagacg
     7801 ggatcgcgct ggcgcagcgc ccgctgccag atgctgagct gccgcgccgt gcgttcgagg
     7861 acgaacaggc cgagctggac gatcagtccc gtctcctcgg cgatggtgat gaactcgccc
     7921 ggcgccatgc ggcccagccg cggatgattc cagcgcgcca gcgcttcgaa gccggcgacg
     7981 acgcggtcgt cgaggcgcac gatcggctga tagaggatgg tgatctcttc gcgctcgatc
     8041 gcccggcgca gatcggattc gagcgacagc cggtcgacct tgcgcgagcg catcgccggc
     8101 ttgaacacgt cgatgcggtc gccgccgatg cgcttggcgt gatacatggc gagttcggcg
     8161 tccttgagcc gctcgtcgcc gcgttgcgcg tcgccgtcgc cgagcgtcaa gccgatcgaa
     8221 ccggtgagaa cgatttcgcg atcgttgaag gtgatcggcg cccgcagcgt gcggcggatg
     8281 gtctcggcgt gggcgatgac gcgcgaggag tcgcgctcgg acaggagcag gagcccgaac
     8341 tgatcgccgg agaggcgcgc cagcgtgtcc tgcggcttga tcagtcgccc gaggcggcgt
     8401 gcgagcgtga gcaggatcga gtcggcgatc gccatcccca ccgagtcgtt gacctgcttg
     8461 aagcggtcga gatcgaccac catcaccgcc gggcggatgg tcgggtcggc cttggcgaag
     8521 ccgagcgccg actcgaggcg gtcgatgaac agttcgcggt tgggcaggcc ggtgaggttg
     8581 tcgtgcacgg cgtcgtgcag caggcgctcc tccaccgtct tgaattcggt gacgtcggtg
     8641 agcgtgccga cgaggcggat cacctcgccg tcggagccga ccacggggcg cgcccgcagc
     8701 gccagccaca cgtagtgacc gtcgaacgtg cgcaggcgga agtcctgcgc cacccggccg
     8761 cggcgctgtt cgacgacgct gtcgagcgtg gcgcggaagc ggtcgcggtc gagcggatgc
     8821 aggacttcga gccaccgcgc cgccgcgcca tcgagcgatc cgctcttgag cccgagcatc
     8881 gcctcgcatt ccgggctggt gaagaccttg tcggcggaca cgtcccagtc ccagatcatg
     8941 tcgccggcgc cggtgagcgc gagcgcgcgc cgctcgacat cggacaccag cggctgggtg
     9001 atgccgccgg caaaggcgtg ctgcatcacc gtgaacccga tcagcatcac gatgaggacg
     9061 agcccgccga gcagtgccgg tccgaccacg tcgttggtga gaaagccgag cgccgtgagt
     9121 gcggctccga tcacccagac cacgagcagc agccaggtcg ggatcagcat caccgcgcgg
     9181 tcgaagccgt gggtggagag atagacgacg agcccgaagc cgagcaccgc gacgaggaac
     9241 agcgatatgc gcgcgatgcc cgaggcgatc gccggcgaga acagcgcgac cgccaccagt
     9301 gcgccgagaa aggcgagcca gccgacggtg atgtgcgcgt agcgcacgtg ccagcggttg
     9361 aggttcagat aggcgaacag gaacaccagc agcgtggccg ccaggattgc ttcgcccgat
     9421 gcgcgccaga tgcgctcggc gcccgaggac atgtcgaaca ctttgcccca gaagccgaag
     9481 tcgacgccga tatagatcaa taccgcccag ccgagcgccg cggcggccgg gaacatgatg
     9541 ctgcctttca ccacgaacag gatcgtgagg aacagcgcca gcaatccggc gatgccgatc
     9601 acgatgccct ggtagagggt gagcgaattc accttgtcct tgtaggcgtc cggctcccag
     9661 agatagagtt gcggcaggtt cggcgtgcgc agttcggcga cgaaggtgat caccgtcccg
     9721 ggatcgagcg tgatgcggaa gacgtccgcg gtcgggctct ccaggcgttc cggcggatcg
     9781 ccagatgaag gcgttatgta cacgatgcgc gacaggccga gatcgggcca caacagcccg
     9841 gagcccacca tccgatagtg cggcgccgcg atcaggcggt cgatctgctc gtcaccgtcg
     9901 ttggcgagcg cgaacaccgc ccaatagttg ccggcttcgc ggccgcgcac ctcgatgcgg
     9961 cggacgatgc cgtcggcgcc gggcgcggtc gatacctgca cgcgatcggc ctcggcccgc
    10021 aggagttcga tggcatccgt gaggtcgatc gccgaggcgt cgaggcggac gttgacggct
    10081 tcgaccgcgc cggcggcgga gacaccgagc aggacggtga acgcaagggc cgcgagcgcc
    10141 gtagcggcac gaacgaatgc caagagacaa cctccgaact cggcagccgg cgcagatcac
    10201 gccccgacgt tgatcaaatc ctcacgcaat ttagccggtt tttgcgccga attcgcggct
    10261 tattcggtcc ccgtcgagtt cttgcgcatc cacgcaacat cccgccaacc atgagtaacc
    10321 gctgcggctt gccggcgcaa gaatattcct ttgtcttttc aaagggtcag gacgatcttg
    10381 ccgatgtgct ggctcgtctc catgcgagcg tgggctttgg cggcttcgcg cagcgggaag
    10441 gtcgaatcga tcaccggctt gacccggcct cccgcgatca gcgggagcac gcggtcctcg
    10501 acggcgcgag caatggcggc cttgtccgcg atggcgcggg cgcggagcgt cgagcccgta
    10561 tgagtgagcc gcttgaacat gaggcgccgg aaatcgacgt cggcatgtga ggcgctctgg
    10621 aaagcgatct gcacgacgcg tccttcgacg gcggctgcct cgtagttgcg ttcgatatag
    10681 ctgccgccga ccatgtcgag gatgacgtcg gcgccgcggc cgtcagtcgc cttcttggtc
    10741 gcggcgacga agtcttcggt cttgtagttg acggcgtcgt cggcgccgag ctcgcggcag
    10801 gccgcgcatt tttccgctgt gccggccgtg gcgatgacac gggcgccgaa agccttggcg
    10861 agctggatcg cggtggtgcc aatccccgag gaaccgccgt gcacgaggag cgtctcgccc
    10921 gcggcaaggc gcccacgctc gaaggcgttg tgccagacgg tgaagaaggt ctcgggtatg
    10981 gccgcgcccg cgatcggcga caggtcggca gggatcggca gcgcgtggct ttcatgcgcg
    11041 aggcagtatt cggcgtaacc gccgccgacg acgagcgcca tgaccttgtc gccatccttc
    11101 cagcgggtgg ccccggcccc gcgcgcgagg acttcgccgg cgatttcgag cccgggaata
    11161 tcggtggcgc ccgggggcgg cggataaagg cccatccgct gcatgacgtc gggccggttg
    11221 acgccggcgg cggcgacctt gaccataatc tcgccggcgc ccggcgtcgg cgtcgggcgc
    11281 tgctccggga ccagaacgtc cggtccgccc ggcgagcgga tcgcgatgac cgtcatgcgg
    11341 tctggaagcg ttgtcatggg aaggccttca agcgtggcgt cgcttttaga ggcgcgccgc
    11401 cgatgtgaca acgggcgccg tagccgataa aatttcaacc cccagaggaa gccggaatgc
    11461 ccgccatcga tcccgacgat ctgccgaaga agaaaatcac ccacgagatc gggcaggact
    11521 tggcgctgct ttcggtcggc gagcttgctg agcgcatcgg gctgcttcgc gaagagatcg
    11581 tgcggcttga agcggaaatg gcgagaaaac gcgtctcgca aaccgcggcg gacgcatttt
    11641 tcaagaaata gccgtcatgc tgcgggcgag gctcctttgc ggctcgcgcg ttcgcacctc
    11701 cggtcggtga ccttatggta aaactgcaga aacatattgc aactttttgc gattccttaa
    11761 ccttttgtta agctttctcc ttcattacgg atatgtccac ttctggacat cgagtggctc
    11821 ctgtccactc tgtttgacgc ctccctgtta tcgccttgag ccgccggcaa cggcggctcc
    11881 ttttttgtcg accgcggccg cgccgccgcg gtcgggccgg aaactatgcc gagagcttgc
    11941 ctgcgttggc cgctggactt gagagcccag ccgcgcgatg ttgggtttgg tgtgaggcgt
    12001 acccatgtcc gagaagcgtt tgagtgatgc cggcgcggta tccttcagcg agcggctggc
    12061 cagttcgcaa atctttgcca cgctctttcg cgatggcatg gcgctggtcg aggaaacggc
    12121 gacctatctc gacggctccg gccgcaacga atccaagaaa ctcgaacgca gcgcagcgat
    12181 ggtctacgcg accgagagca tgcggctgac cacccggctg atgcaacttg catcctggct
    12241 tctgctgcac cgggcggtga aggaaggcga gatgacgctc gcccaagcga gcaaggaaaa
    12301 gagcaaggtc aggctcgccg cctgcgatcc cggcgatgca aaatcgatcg cgctcttgcc
    12361 cggaaaactg caggagctga ttgtgcgctc ggtcaagctg caggccgagg tgcgacgtct
    12421 cgacgcgacc atgcacgcgt cggcgccgct tcaggtcgcg gtgggcaatc cggtcgagcg
    12481 gcaattggga ctgctgaagg cggccttcga gcaggacggc ccctaacctc gtttcgcgcg
    12541 ttggcgtgga cgcgccaccg ccgcttcggg ggaccgctac ttcttcagga agccggaaaa
    12601 cttcttttgg aatcgcgaca accggccgcc gcggtcgata aggtgctgct ggccgccggt
    12661 ccaggcgggg tgcgacttcg ggtcgatgtc gagatggagc gtatcgcccg gcttgcccca
    12721 ggtcgtgcgc gttgtgaact cggtgccgtc ggtcatgatc accgtgacga ggtggtagtc
    12781 ggggtggatc tcggatttca tcgctgttgc cgcgtttccg ttggcgcgcc gctgcggccg
    12841 cttgtcgctg gtgaaaattt cgccgctcta tacctcgccg gctgggggga aacaagcgcg
    12901 cgttgcctgc ggtgcgcggc cggcgcattg tccggcgctc gcgccggaac ggcgaaaggt
    12961 gtggcggtgc atgaacttca gggcggaaaa ggatgcggcg accatcgcgg cggtaatggc
    13021 gtcgccgccc gcggcggccg agccggaagc cgctacgccg tctgcaaagc cagcgtccgg
    13081 ggggaggggg gtcaatgtgc ggccgctcgc ggcgctcctc ccctacgtc
//
LOCUS       DATMQB010000114         2700 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4372010, whole genome shotgun sequence.
ACCESSION   DATMQB010000114 DATMQB010000000
VERSION     DATMQB010000114.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2700)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2700)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2700
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4372010"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..690)
                     /locus_tag="VNY79_03620"
     CDS             complement(<1..690)
                     /locus_tag="VNY79_03620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HWX71569.1"
                     /translation="MGEDRERGEQQPSKLAPPPDNSWDRRADFANAHTARASVARGFG
                     EAPQQGYVGKTPVPPGELDPDLARALGIDEDEGDAKSDAERGVITPDMGPAHLRLRRP
                     GRGEVATIAGLASQQSLDRLLREGRAEFLDRPWTPHRPPRPEKSEGGRRLVIKADFEP
                     QGDQPQAIAELVEGVRRNDRTQVLLGVTGSGKTFTMAKVIEETQRPGLILAPNKTLAA
                     QLYGEFRTFFPD"
     gene            1156..2391
                     /locus_tag="VNY79_03625"
     CDS             1156..2391
                     /locus_tag="VNY79_03625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HWX71570.1"
                     /translation="MTSFDFAPLLAPGLPPPAVKWTGFAKYNFTGGHNDADHVPVDEL
                     LKAATDVLAREGRNLATYGLASGPLGYRPLRDFLAQKLKRAAGISCDADEILITSGSL
                     QAIDLVNGILLDRGDTVIIEQATYQGALTRLVRLGVTAVGVPLDAEGMRMDALAAALD
                     DLKRRGVRPKYIYTIPTVQNPTGTIMSEARRHELLRLAAEHGVPIFEDDCYADLIWDG
                     RRPPALHGMSQHGGVIHIGSFSKSIAPALRVGYIVAEWDVLARMLALKTDAGSGALEQ
                     MVLGEFCAPHFDAHVPRLTRGLRAKLETLMDALNEQFGTAAEFDDPKGGIFLWVKLPD
                     AVDTQKLFQPALAAGVAINPGAEWSTDPGHGKSRTRLCFANPSHETIRAGVAMLAEVC
                     RREFGVPDRIANVEQRARA"
     gene            complement(2547..>2700)
                     /locus_tag="VNY79_03630"
     CDS             complement(2547..>2700)
                     /locus_tag="VNY79_03630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HWX71571.1"
                     /translation="YRLFVTWETVENHNIDFRGSPDFQEWRKLVGHCFASPPQVEHVQ
                     QVLQGF"
BASE COUNT          430 a          937 c          887 g          446 t
ORIGIN      
        1 gtcgggaaag aaggtcctga actcgccata gagctgcgcc gccagcgtct tgttgggcgc
       61 gaggatcagt ccggggcgct gcgtctcctc gatcaccttc gccatggtga aggtcttgcc
      121 cgagccggtg acgccgagca gaacctgggt gcggtcgttg cgccgcacgc cttcgaccag
      181 ctcggcgatc gcctgcggct ggtcgccctg cggctcgaaa tcggccttga tgacgagccg
      241 ccggccgcct tccgacttct ccggccgcgg cggccggtgc ggcgtccacg ggcgatcgag
      301 aaactcggcc cggccttcgc gcaacaacct gtcgagcgat tgctggctgg cgaggccggc
      361 aatagtcgca acctcgccgc ggcccggccg ccgcaagcgc aagtgcgccg gccccatgtc
      421 gggcgttatc acgccgcgct ctgcgtcgct cttggcgtct ccttcgtcct catcgatccc
      481 caacgcgcgg gcaaggtccg gatcgagttc gcccggcggc accggcgtct tgccgacata
      541 accctgctgc ggcgcctcgc caaagccgcg cgccaccgag gcgcgcgccg tgtgcgcgtt
      601 ggcgaaatcg gcacggcgat cccacgaatt gtcgggcggc ggcgccagct tcgatggctg
      661 ctgttccccg cgctctcgat cctcccccac cgctcgctct tcccctcccc cttgtgggga
      721 ggggccaggg gtgggggtcg ggaggcgacg ctctggttct gacgggccct gtgcggtagc
      781 cgacgcgtgg tgcccggccg cacgcccccc ctcccttccc tcccccacaa ggggggaggg
      841 agtagacgcg cgcttctttt catcgaggcc ggtctgcgat ccgacgccgg cgcggccgcg
      901 gccgatgccg gggttgagca aatccgcaag cgatgggtca agcggcgccg aatccggccg
      961 cgccgccttg gcgcgcgtcg gtttcgcggg gtctttcttc gaatgtttag ccggatcgcg
     1021 atacttcggc ggagccggcc ggtcggggct tttcgccatg gctcgaatat gggccgagtc
     1081 cggtagcggg gaaagtgtgg ctgttctagc attccgccac acgaagatgg cgggcaccgc
     1141 aggggaaatg gatcaatgac ttcattcgat ttcgcgccac tgctggcacc cgggctgccg
     1201 ccgccggccg tcaagtggac gggcttcgcc aagtacaatt tcaccggcgg ccacaacgac
     1261 gccgatcatg ttccggtcga tgagttgctg aaggcggcga ccgacgtgct cgcgcgcgaa
     1321 ggcaggaacc tcgcgacgta cgggcttgcc agcggcccgc tcggctaccg tccgctgcgc
     1381 gacttcctcg cgcagaagct caagcgcgcc gccggcatct cgtgcgatgc cgacgaaatc
     1441 ctcatcacct ccggctcgct gcaggcgatc gatctcgtca acggcatcct cctcgatcgc
     1501 ggcgataccg tcatcatcga gcaggcgacg tatcagggcg cactgacgcg tctggtgcgg
     1561 cttggcgtta cggccgtcgg cgtcccgctc gacgccgagg gcatgcgcat ggacgcgctc
     1621 gcagccgcgc tagacgacct caagcgccgc ggcgtgcgcc cgaaatacat ctacaccatt
     1681 ccaaccgtgc agaatccgac cggcacgatc atgagcgaag cacgccggca tgagctgttg
     1741 cgcctcgccg cagagcacgg cgtgccgatc ttcgaggacg attgctacgc cgatctcatc
     1801 tgggacggcc ggcggccgcc ggcgctccac ggcatgagcc aacacggcgg cgtcattcat
     1861 atcggctcgt tctccaagtc gatcgcgccg gcgctgcgcg tcggctacat cgtcgccgaa
     1921 tgggacgtgc tcgcgcgcat gctcgcgctc aagaccgatg ccggctccgg cgccctcgaa
     1981 cagatggtgc tcggcgaatt ttgcgccccg catttcgacg cgcacgtgcc gcggctgacg
     2041 cgcggactgc gggccaagct cgaaacgctg atggatgcac tcaacgagca gttcggcacc
     2101 gcggccgagt tcgacgatcc gaagggcggc atctttctct gggtgaaact tccggacgcg
     2161 gtcgataccc aaaaattgtt tcagccggcg ctcgccgccg gcgtcgccat caatccgggc
     2221 gccgagtggt cgacagaccc gggccacggc aaaagccgca cgcggctgtg ctttgccaat
     2281 ccctcgcacg aaacgatccg cgccggcgtc gccatgctgg ccgaagtctg ccggcgcgag
     2341 ttcggcgtgc cggaccggat cgccaacgtc gagcagcggg cacgcgcctg acgccgtcat
     2401 ttcccgtggg gccgagccaa cgggcctgcc ccgaaggggc cggcccgatg acagctccgc
     2461 gaggagcccg gaaccaacaa tcatagtccg tgggaatgga ttccggcctt gccgcttcgc
     2521 agcaatcggg actgacaaac aggcggtcaa aacccttgca aaacctgctg cacgtgctcg
     2581 acctgcggcg gggaggcaaa gcaatggccg acgagcttgc gccattcctg aaaatcgggc
     2641 gagccgcgaa agtcgatatt gtggttctcg accgtctccc aggtgacgaa cagccgatag
//
LOCUS       DATMQB010000115         2900 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3449558, whole genome shotgun sequence.
ACCESSION   DATMQB010000115 DATMQB010000000
VERSION     DATMQB010000115.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2900
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3449558"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1614)
                     /locus_tag="VNY79_03635"
     CDS             complement(<1..1614)
                     /locus_tag="VNY79_03635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HWX71572.1"
                     /translation="MSTMTINGQSRPLPDDADALLVDVIRDQLALTGTKLVCGSGVCG
                     ACTVLLDGSPVASCLLPAQAAAGKTLTTVEGIGGTKLHPIQKAFMAHDALQCGFCTPG
                     FILEAAAFHGYWRAAKRAATPSREEIAAALSGHLCRCGAYENIFRAVADACAGRFDGD
                     NVIAPRTEARDKVTGAARYTVDIRHDGQLEGVILRSPAAHAKITALDLAPARVLPGVA
                     AAIPLLADDNVVRYVGAPIAAVAAKDRRTALAAIAAIKFSSETLPAAIGLDAARRADA
                     PVVFARADRKYAGNVSEGGGSPASWKGNVRGPSAAFSQKGKRAKAWLTEAHERRDPLL
                     VEATFHVATQSHACLEPHAAVARFDGDRLTVHASTQAVYEAMEKLSKRYKLPHDKVRV
                     IADHVGGGFGSKGSLGMETIAAVELARAANAPVRVAYDREEELSVAGYRPAAEIKVGL
                     LPSAKGDLKALSLTAYADTGAATNSTIAALARLIYPAEAKELADFDVISNLPPGAPFR
                     GPGGPPMAFALEQAVDEAALRLKVDPISLR"
     gene            complement(1611..2264)
                     /locus_tag="VNY79_03640"
     CDS             complement(1611..2264)
                     /locus_tag="VNY79_03640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HWX71573.1"
                     /translation="MPTQAEPQDRILDAAMRVFRRHGFRRSSIEQAAEEAGLTRQALY
                     HHFSSKEALFRAVITRLYESALAAEVAAAEAEVDAGQDLGEILVAEVSARLRLLLTSL
                     EGSPHTEELFSEHLAQTPDLYQLYASRYAEQVTTTITRVCRKRDVTLDRGMTPRALAR
                     LIEMAVHGTKSAYPSMLPADAFLKDLGVMLRTLVAGAVVSPMKRPAEKSRRKGESRK"
     gene            complement(2558..>2900)
                     /locus_tag="VNY79_03645"
     CDS             complement(2558..>2900)
                     /locus_tag="VNY79_03645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aldehyde dehydrogenase family protein"
                     /protein_id="HWX71574.1"
                     /translation="TVFADVRDDMRIAQEEIFGPVISAIPFKDMDELVQRANATMFGL
                     GSGVWTRDVSKAHHLAAAIRAGSVWVNCYQAMDPAVPFGGYKMSGYGRESGLQQMEEY
                     LNVKAVWIKTG"
BASE COUNT          506 a          933 c          933 g          528 t
ORIGIN      
        1 gcgtaagctg atcgggtcaa ccttgagccg cagggcagct tcgtcgaccg cctgttccag
       61 cgcaaaagcc atcggcggac cgccggggcc gcggaatggt gcgccgggcg gcaggttgct
      121 gatgacgtcg aaatcggcga gctccttcgc ttccgccgga tagatcagcc gcgccagtgc
      181 ggcaatggtc gagttcgtcg ccgcccctgt gtcggcatag gcggtcagcg acagtgcttt
      241 gagatcgcct ttcgcggacg gcaggagccc gaccttgatt tccgcggccg gccgatagcc
      301 ggcaacggac agttcttcct cgcggtcgta ggcgaccctg accggcgcat ttgccgcgcg
      361 cgcgagctcg acagcggcga tcgtttccat gccaagactg cccttggagc caaagccgcc
      421 gccgacatgg tcggcgatga cgcgtacctt gtcgtgcggg agcttgtaac gcttgctcag
      481 cttttccatc gcctcgtaga cagcctgcgt cgaggcatgg acggtcaagc gatcgccgtc
      541 gaaccgcgcc actgcggcgt gcggctcgag gcacgcgtgc gactgcgtcg caacgtggaa
      601 ggttgcttcc acgagcagcg gatcgcgcct ttcgtgcgcc tcggtgagcc aggccttggc
      661 gcgcttgccc ttctgggaga aggccgccga cggtccgcgg acattgccct tccaagacgc
      721 cggagagccg ccgccttcgg agacgttgcc ggcgtacttt cgatctgccc ttgcaaagac
      781 aaccggcgcg tccgcgcgtc gggctgcatc aagcccgatc gccgcgggca gggtttcgct
      841 ggagaacttt atcgcggcga ttgcggcaag ggcagtgcgg cggtctttcg cggccacagc
      901 cgcaatggga gcgccgacat agcgcacgac gttgtcgtcg gcgagcagtg ggatcgcagc
      961 agcaaccccg ggaagcacgc gcgcgggcgc aagatcaagc gcagtgattt tagcatgcgc
     1021 ggcaggagag cgcaggatga cgccttcaag ctgcccgtca tggcggatgt cgaccgtata
     1081 gcgcgccgcg cccgtcacct tgtcgcgcgc ctctgtccga ggtgcaatga cattgtcgcc
     1141 gtcgaaacgc cctgcacagg catccgcaac cgcgcgaaag atgttctcat aggcgccgca
     1201 gcggcagaga tgtcccgaca gtgcggcggc gatttcctcg cgcgacggcg tcgccgcgcg
     1261 cttggccgcg cgccagtagc cgtgaaacgc ggcggcttcc aggatgaacc cgggtgtgca
     1321 gaatccacac tggagtgcat cgtgcgccat gaaggccttc tggatcgggt gcagctttgt
     1381 gccgccgatg ccttcgacgg tggtcagtgt cttgccggcc gctgcttgcg cgggcagcag
     1441 gcagcttgcg accggggagc cgtcgagcag cacggtgcat gcgccgcaca cgccggaccc
     1501 gcatacgagc ttggttccgg tcagggcgag ctgatcgcgg atcacatcca cgagcagtgc
     1561 gtcggcgtca tcgggcagcg gtctggattg gccgttgatc gtcatggtgc tcatttccgg
     1621 ctctcccctt tgcggcggga tttttccgca ggccgcttca tcggcgacac aactgcgccg
     1681 gcgaccagcg tccgcagcat gactccaaga tccttcagga acgcgtcggc cggcagcatg
     1741 gacggatagg ctgatttggt cccgtgaacg gccatctcga tcaagcgagc cagcgcacga
     1801 ggggtcatgc ccctgtccag tgtgacgtcc cgcttgcggc agacgcgcgt aatcgtcgtg
     1861 gtgacctgct cggcatagcg tgacgcatag agctggtaga gatcaggcgt ctgcgcgaga
     1921 tgctcggaga acaactcttc cgtatgcggc gatccctcga gcgaagtcag aagcaaccgt
     1981 aaccgcgcgg atacctcggc cacgagaatc tcaccgagat cttggcccgc atctacttca
     2041 gcctccgcgg ccgctacctc ggcggcaagc gcgctttcat acagccgcgt gatgaccgct
     2101 cggaacaagg cctccttcga cgagaaatga tgatagagcg cctgccgcgt caggccggct
     2161 tcctccgcgg cctgctcgat cgaggagcgc cgaaagccgt ggcgtcggaa cacgcgcatg
     2221 gcggcatcaa gaatgcggtc ttgtggctcg gcctgggtcg gcatttgaca aactttacaa
     2281 atgccgcaga aatgtaaaat cacggtttgg tgacgggcgg ggccgggcgg tcaccatggc
     2341 gtcattgtca tccactagtc gccgtatcgg ttacgtaaca aactcggcga ttgtctgcga
     2401 cttagcattc gaggggttca cgcataccgg cggcgtagcg cgcctgcgcg gacggcgaag
     2461 tgcccgaaat atgcgatgtc ctaccgtggc cgccgctcaa cttgcggagc ggaattcaca
     2521 gatgagagaa ggttcccgcc gccggccggc gtatcggcta tccggtcttg atccacaccg
     2581 ccttgacgtt gagatattct tccatctgct gaaggcctga ctcgcggccg tatccgctca
     2641 tcttgtagcc gccgaacggt accgccgggt ccatcgcctg atagcaattc acccataccg
     2701 aaccggcgcg gatcgccgcc gccaggtgat gcgccttgct cacgtccctc gtccacacgc
     2761 cgctgcccag cccgaacatc gtggcattgg cgcgttgcac cagttcatcc atgtccttga
     2821 acggaatcgc cgagatgacc ggaccaaaaa tctcctcttg cgcgatccgc atgtcgtcgc
     2881 ggacgtcggc gaaaaccgtc
//
LOCUS       DATMQB010000116        12133 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2512451, whole genome shotgun sequence.
ACCESSION   DATMQB010000116 DATMQB010000000
VERSION     DATMQB010000116.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 12133)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12133)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12133
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2512451"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            12..686
                     /locus_tag="VNY79_03650"
     CDS             12..686
                     /locus_tag="VNY79_03650"
                     /inference="COORDINATES: protein motif:HMM:NF016163.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF429 domain-containing protein"
                     /protein_id="HWX71575.1"
                     /translation="MFVGLDGCAKGWVAVRLDENGTREIDFLTDLKDCLSGSFTRAMI
                     DIPIGLPDSQYRNCDLEGRKLLGGNRSRLFSGARRPLLSYEKREDAHACGKATDGIGV
                     SCQLFCLLPKIRQVDELMTSRRQARVRESHPELIFQRLNDCASLPSKKTHDGRRLRRR
                     ILLDQGFASIDAWLDRRSGTGTKPDDVLDACAGAVAAREACEERRLPRKRQPPDAKGL
                     KMEIWF"
     gene            complement(751..1455)
                     /locus_tag="VNY79_03655"
     CDS             complement(751..1455)
                     /locus_tag="VNY79_03655"
                     /inference="COORDINATES: protein motif:HMM:NF013382.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HWX71576.1"
                     /translation="MTVWIDRDRAFVARRYDYLARLITLFEWLLFVSGKFREQAVATL
                     ELKPGDRVLEIGCGTGRNLPPLRAAVGDTGHVYGIDLSAGMLTRARSLVDRHRWRNVT
                     LEHGDAVDYQAPEPLDGVLFGFSYSTMPHHHAVLRRALAQLRPGGRVCVMDATLPPGR
                     WGRMILPLSVWLMKHTLLGNPYNHPWEHVARATVDFQIRHFLFSAYYVCRGTKRTDTQ
                     QSSVLEGPFVQSEAAE"
     gene            complement(1694..2782)
                     /locus_tag="VNY79_03660"
     CDS             complement(1694..2782)
                     /locus_tag="VNY79_03660"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HWX71577.1"
                     /translation="MQLGFFTMPIHPLGKDWRTSLREDREAFLLADQLGFVEGYVGEH
                     ATDRAENITSSAMFIASLADATRTIKLGTGTINMPNAHPVATASQIAMLDHMLDGRFI
                     FGISPGGLLSDAEAFGNLDADRNAMFVEAISAVLEIWAREPPYDIKGKYWTIRIERQA
                     MLEIGQGFLPRPLQKPHPPIVVTVVAPFSKGVTEAAARGWEPISANFLMPEWVKSHWP
                     KYVEGCARAGRTADPVNWRVAKSIFVADDERTAKAYATDPASPYRYYYSQLYSKLKKG
                     RLELFKTRRDQPDHEVTLDGICDELIIHGSPDKVADEILKFRERVGDFGTLLYAGKDW
                     RDPALAKRSMILMAEQVLPKINAAIGTE"
     gene            2899..3084
                     /locus_tag="VNY79_03665"
     CDS             2899..3084
                     /locus_tag="VNY79_03665"
                     /inference="COORDINATES: protein motif:HMM:NF016167.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF433 domain-containing protein"
                     /protein_id="HWX71578.1"
                     /translation="MTHPVISRDSDVMGGTPVFCGTRVPVQTLIEYLDAGETIDAFLE
                     GFPSVTREQVIALLESR"
     gene            complement(3234..4085)
                     /locus_tag="VNY79_03670"
     CDS             complement(3234..4085)
                     /locus_tag="VNY79_03670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HWX71579.1"
                     /translation="MKLVRYGALGREKPGMLDAQGRIRDLSKIVPDIAGEALSPKGLA
                     KLRKLKPDKLPLVRGTPRIGACVGKVGNFIAIGLNYADHAAEAGMPLPKEPLVFNKAP
                     SSISGPNDDTMIPKSSTKLDYEVELGIVIGSRARYLAKDKAMEAVAGYCLGNDVSERV
                     FQIERVGQFTKGKSAETFGPLGPWLVTKDEIRDPQRLDMWLTVNGESRQKGTTRNMVF
                     GVAHVVWYCSQFFVMEPGDVILTGTPPGVGMGFKPEPKFLKAGDVVRLGIDGLGEQQQ
                     KVVKFKM"
     gene            complement(4100..4879)
                     /locus_tag="VNY79_03675"
     CDS             complement(4100..4879)
                     /locus_tag="VNY79_03675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013531889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX71580.1"
                     /translation="MDLGIAGRKAIVCASSRGLGRACAKALAEAGCEVVINGRDRDRL
                     AETAAELRKMGGGKIVPVVADVASPEGQKALFDACPEPDILVNNNAGPPFRDFRELDR
                     QKMIDGVIANMIVAIELIQKAIGPMTAKKFGRIVNITSGSVRMPLVGLDLSSGARAGL
                     TAFLAGVARSVAASNVTINSVLPGAFETDRFRGHVEATAKSKGISREAVFAERIGGVP
                     ARRVGDPDELGAACAFLCSAHAGYITGQNLLMDGGVFPGAF"
     gene            complement(5009..5902)
                     /gene="hemF"
                     /locus_tag="VNY79_03680"
     CDS             complement(5009..5902)
                     /gene="hemF"
                     /locus_tag="VNY79_03680"
                     /EC_number="1.3.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004109 - coproporphyrinogen oxidase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-dependent coproporphyrinogen oxidase"
                     /protein_id="HWX71581.1"
                     /translation="MEVDRLEIRKRRARAWSETLRDRIVAAFEELEDALPADAPQGTS
                     TAGRFVRTPWNRTDHRGAPGGGGVMAMMKGRVFEKVGVHLSTVFGEFAPEFRKEVPGA
                     ADDPRFYANGVSVIAHLHNPHVPAVHMNTRFVVTTKAWFGGGADLTPLLAGRRTQDDP
                     DTVAFHAAMKAACDAHAAAAPYDRFKAWCDEYFFLKHRGEMRGIGGIFYDWLDSGDFE
                     ADFAFTQEVGRAFLGVYPGLVRRNFAKPWTEAERDEQLVRRGRYVEFNLLYDRGTVFG
                     LRTGGNVESILSSMPPVAKWP"
     gene            6030..7637
                     /locus_tag="VNY79_03685"
     CDS             6030..7637
                     /locus_tag="VNY79_03685"
                     /inference="COORDINATES: protein motif:HMM:NF020976.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase D family protein"
                     /protein_id="HWX71582.1"
                     /translation="MSVRLTPNPLTRRRLLAGAGSSGLLLVAAPSLLRHATAQVWRAG
                     DPFSLGVASGAPRADGFVLWTRLAPDPLSSNPATPGGMIGGDVTVGYEIADDPGMREI
                     VRRGEAVAEQAFAYSVHLDVRGLQPGRPYWYRFLSGDAASRVGRASTLPAPGAGLERL
                     RFGFVSCSNYEHGYFSAYRHLADENPEVVLYLGDYIYEHIEERRPVVRRHSDGIEAAT
                     LPTYRNRHAQYRLDPDLQRLHAEVPALITWDDHDVQNDYADKWSQYFDDPELFLLRRA
                     AAYQAFYEHMPLRPIVSRPEGPRMRIYDRFSFGDLIEISMIDGRQYRSREPCYAPPDK
                     GGMHLETNAGCPERLEAGRTMLGFAQEVWLHSNLAHSKAQWNLIAQDVLMAQYRVKQG
                     SADAFSTDNWDGYPANRARLLKRIQQTQVSNPVVIGGDIHSFFANDLKLDFDNPASPV
                     VATEFVGTSISSHGPPYEVIAPALPDNPHVHFFESRRRGYVCVDLDRAQMQVRMRVVS
                     DAADPKADISTLKTFAVEGGRPGVVAA"
     gene            complement(7751..8029)
                     /locus_tag="VNY79_03690"
     CDS             complement(7751..8029)
                     /locus_tag="VNY79_03690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007636217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnA antitoxin family protein"
                     /protein_id="HWX71583.1"
                     /translation="MRRKLKPITGAIPRFRSEAEEREFWETHDSADYVDWSKAQRARF
                     PNLKLSTTAISLRLPQGLLDRIKIAANKRDVPYQSLIKVWLAEKLDAE"
     gene            complement(8013..8315)
                     /locus_tag="VNY79_03695"
     CDS             complement(8013..8315)
                     /locus_tag="VNY79_03695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007636209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BrnT family toxin"
                     /protein_id="HWX71584.1"
                     /translation="MLDLSQTIGFDWDEANSGKSASKHSLSRAEAEQIFFDEQLLLAD
                     DVKHSQDEPRYHALGQTIEGRLLHVTFTLRDNQTRIRVISARDANRRERAAYAQKA"
     gene            complement(8347..8823)
                     /locus_tag="VNY79_03700"
     CDS             complement(8347..8823)
                     /locus_tag="VNY79_03700"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0008175 - tRNA methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (cytidine(34)-2'-O)-methyltransferase"
                     /protein_id="HWX71585.1"
                     /translation="MRIALYQPDIPQNTGTILRLCACLGIEAHLIGPAGFPTSDRAFR
                     RAGMDYLDAVAIVRHRSWRDFESWHRGGDHRLVLFTTAGALSYLDYRYQADDILLFGR
                     ESAGVPAEVHAAADARLVIPMRPGLRSLNIAAAAAIGAGEALRQTGGFRTGPDPRA"
     gene            9082..9630
                     /gene="petA"
                     /locus_tag="VNY79_03705"
     CDS             9082..9630
                     /gene="petA"
                     /locus_tag="VNY79_03705"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HWX71586.1"
                     /translation="MTTISAAEPSRRDFLLVATGTVAAVGAAAALVPLIGQMEPDAST
                     IAAGAPLDVNLAPIAEGQIVKVFWRSKPIFIFHRSKRDIDSAREVNWHTLPDPAPDSA
                     RVQAGHEQWLVLIGICTHLGCIPLAHQGNYDGWFCPCHGSQYDTSGRIRQGPAPLNLA
                     LPPYKFVSDTTIRIGETAPAKA"
     gene            9640..11809
                     /locus_tag="VNY79_03710"
                     /pseudo
     CDS             9640..11809
                     /locus_tag="VNY79_03710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014497387.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c1"
     gene            complement(11824..12021)
                     /locus_tag="VNY79_03715"
     CDS             complement(11824..12021)
                     /locus_tag="VNY79_03715"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71587.1"
                     /translation="MTETGQRVVVVDLRIPFVRLVLFFVKAAFAAIPAAIIVGFLLML
                     VTALFAGLAGDGGFVMMRRSF"
BASE COUNT         2055 a         3960 c         3885 g         2233 t
ORIGIN      
        1 tcaagtagcc gatgttcgtc gggctcgacg gctgtgcaaa aggctgggtc gccgtccggc
       61 tcgacgagaa cggaacaaga gagatcgact tcctgaccga cctgaaggat tgccttagcg
      121 gctcttttac gagagcgatg atcgacattc cgatcggctt gcccgacagc caatatcgaa
      181 attgcgacct cgaggggcgc aagctgcttg gcggaaatcg atcccgcctg ttcagcggcg
      241 cccgtcgtcc gctgctttca tacgaaaagc gcgaagatgc tcatgcctgt ggaaaggcta
      301 ccgacggcat cggggtctcg tgtcagcttt tctgtctgtt gccgaagatc agacaagtcg
      361 atgaacttat gacttcgcgc cgccaggcgc gcgttcgcga aagtcatccc gagctgatct
      421 ttcaacgctt gaacgactgc gcttcgctgc cgtccaagaa gacccacgat ggcagacggc
      481 tgcgtcgccg gattttgttg gaccagggct ttgcgtcaat tgacgcttgg cttgaccggc
      541 gcagcgggac gggcacgaaa ccggatgacg ttcttgatgc gtgcgccggc gccgtcgccg
      601 ccagggaggc gtgcgaagag cggcggcttc ccaggaagcg gcaaccgcca gatgccaagg
      661 gcctgaaaat ggaaatctgg ttctaagcgg agtgggagtt tgcgcaccga cgccgtccgg
      721 tctccgtccg gaggcacccg gctttcccgc ctactccgca gcctccgact ggacgaatgg
      781 tccttcgagc acgctcgatt gttgagtgtc ggtgcgcttg gtcccgcggc agacgtagta
      841 agcggaaaac agaaaatgtc ttatttgaaa gtcgacggtt gctcgcgcca catgctccca
      901 cggatgatta taggggttgc ccaggagcgt gtgcttcatc aaccagacgc tcaagggcaa
      961 aatcattctg ccccatcggc ctggcggcag cgtcgcatcc atcacgcaga cccgtccgcc
     1021 tggccgcagc tgcgccagtg cccggcgaag gaccgcgtga tgatgcggca ttgtgctgta
     1081 ggagaagccg aacagcacgc catcgagcgg ctcgggcgct tgatagtcta ccgcgtcgcc
     1141 atgctccaac gtcacgttcc gccaccgatg ccggtcgacg aggctacgcg cccgcgtcag
     1201 cattcccgcc gacagatcga tgccatagac gtggccggtg tcgccaaccg ccgctcgcaa
     1261 ggggggcaga ttgcggcccg tgccgcagcc gatctcgaga accctgtctc cgggcttcag
     1321 ttcgagcgtc gcgaccgcct gctcgcgaaa ttttcccgaa acaaacaata accattcgaa
     1381 caaggtgatg agtctcgcca aataatcata ccgccgcgca acgaacgcgc ggtcgcgatc
     1441 gatccacacc gtcacggaac gcccccaaac gtttcttatt ctttatgccg atgttaactt
     1501 actattgtgc cgccaccggc gcaactgcga agccaaatcc gggcaattaa ttcacagagt
     1561 ccaccgctgt tacggcaatc tgcaatttga agctgtgcgg actgacactc atgtcaagat
     1621 gtgacgtcca tgtcatgata acgtcacagc agtcgccttc ggcgcgcggc gcgcggcgcg
     1681 cgaagatcgc cgctcactcg gtcccgatcg cggcgttgat cttgggcagc acctgctccg
     1741 ccatcaaaat catcgaccgc ttggcgagcg ccgggtcgcg ccagtccttg ccggcgtaga
     1801 ggagcgtgcc gaagtcgccg acgcgctcgc ggaatttcag gatctcgtcg gcgaccttgt
     1861 cgggcgagcc gtggatgatg agctcgtcgc agatgccgtc gagcgtcact tcgtggtcgg
     1921 gctggtcgcg gcgcgtcttg aacaactcga gccgcccctt cttcagcttg ctgtagagct
     1981 ggctgtagta atagcggtac gggcttgccg ggtcggtggc gtaggccttc gcggtccgct
     2041 cgtcgtcggc gacgaagatc gatttggcga cccgccagtt caccggatcg gcggtgcggc
     2101 cggcgcgtgc acagccctcg acgtatttcg gccagtggct cttgacccac tccggcatca
     2161 ggaaattcgc cgagatcggc tcccagccgc gtgccgcggc ctcggtcacg cccttggaga
     2221 acggcgccac cacggtcacc acgatcggcg gatgcggctt ctgcagcggc ctgggcagaa
     2281 aaccctgacc gatctcgagc atcgcctgcc gctcgatcct gatggtccag tacttgccct
     2341 tgatgtcgta gggcggctcg cgcgcccaga tctccagcac cgcgctgatc gcctcgacga
     2401 acatggcgtt gcggtcggcg tcgaggttgc cgaacgcctc ggcgtcggag agaagcccgc
     2461 ccgggctgat gccgaagatg aagcggccgt cgagcatgtg gtcgagcatc gcaatctgcg
     2521 aggcggtcgc gaccggatgc gcgttcggca tgttgatggt gccggtgccg agcttgatcg
     2581 tgcgggtggc gtcggcgagg ctcgcgatga acatcgcgct cgaggtgatg ttctcggcgc
     2641 ggtcggtcgc gtgctccccg acatagcctt cgacgaagcc gagctggtcg gcgagcagaa
     2701 acgcttcgcg gtcctcgcgc agcgacgtcc gccagtcctt gcccagcgga tgaatcggca
     2761 tggtgaaaaa gccgagttgc atggtgcgtg gccgttctca gatctcgctt gactcacctg
     2821 tgtcggaaaa gtgcccagcg tgcaagacgc catcgcgtgc gggctgctga gcgtggtggc
     2881 gtggactaat ttgcttccat gacacaccca gtgatcagcc gtgactcgga cgtgatggga
     2941 ggaacgcccg tcttttgtgg tacccgcgtg ccggtgcaga ccctcatcga atatctcgac
     3001 gccggagaga cgatcgatgc gtttctcgag ggctttccgt cggtgacgcg cgagcaggtg
     3061 atcgccctgc tcgaatctag atgatcgtca cggccggact tgctctggcc accgacgtct
     3121 ttcttccatg catttcgctg cagacatgaa atagagccgg cgaaacggcc atcaaagaag
     3181 acgcggatgg ccgggacaag cccggccatg aggcgcgacg aacggaattc ccctcacatc
     3241 ttgaacttca ccaccttctg ctgctgctcg ccgaggccgt cgatgccgag gcgcaccacg
     3301 tcgccggcct tgaggaattt cggctccggc ttgaacccca tgccgacgcc cggcggggtg
     3361 ccggtgagga tcacgtcgcc cggctccatg acgaagaact gcgagcagta ccagaccacg
     3421 tgggcgacgc cgaacaccat gttgcgcgtc gtgcccttct gccggctctc gccgttgacc
     3481 gtgagccaca tgtcgagccg ctgcgggtcg cggatctcgt ccttggtcac gagccacggc
     3541 ccgagcgggc cgaaggtctc ggcgctcttg cccttggtga actggccgac ccgctcgatc
     3601 tggaagaccc gttcggagac gtcgttgccg aggcaatagc cggcgaccgc ctccatggcc
     3661 ttgtccttgg cgagatagcg ggcacggctg ccgatgacga tgccgagctc gacctcgtag
     3721 tcgagcttgg tcgagctctt cgggatcatg gtgtcgtcgt tcggcccgct gatggagctc
     3781 ggcgccttgt tgaagaccag cggctccttg gggagcggca tgccggcctc ggcggcatgg
     3841 tcggcatagt tgagcccgat ggcgatgaag ttgccgacct tgccgacgca ggcgccgatg
     3901 cgcggggtgc cgcgcaccag cggcagcttg tcgggcttga gcttgcgcag cttggcgagg
     3961 cccttgggcg agagcgcctc gccggcaatg tcgggcacga tcttcgacag gtcgcggatg
     4021 cggccctgcg catcgagcat gccgggtttt tcccggccca gtgcgccgta gcggacaagc
     4081 ttcatcgaaa ttctcctggt tagaatgcgc ccggaaaaac cccgccgtcc atgagcagat
     4141 tttgaccggt gatgtagccg gcgtgcgccg agcagaggaa ggcgcaggcc gcgccgagct
     4201 cgtcggggtc gccgacccgc cgcgccggca cgccgccgat gcgttcggcg aacacggctt
     4261 cgcggctgat gcccttgctc ttcgcggtgg cttccacgtg gccgcgaaag cgatcggtct
     4321 cgaacgcgcc gggcagcacg gaattgatgg tgacgttgga cgcggcgacg gagcgggcga
     4381 cgccggcgag aaaggcggtg aggccggcgc gcgcgccgga ggaaaggtcg agccccacga
     4441 gcggcatccg cacggagccg gaggtgatgt tgacgatgcg gccgaatttt ttggccgtca
     4501 tcgggccgat ggccttctgg atcagctcga tcgccacgat catgttggcg atgacgccgt
     4561 cgatcatctt ctgccggtcg agctcgcgga agtcgcggaa gggcgggccg gcattgttgt
     4621 tgaccaggat gtccggctcc gggcaggcgt cgaacagcgc cttctgtccc tcgggcgagg
     4681 cgacgtcggc caccacggga acgatctttc caccgcccat cttgcgcagt tcggcggcgg
     4741 tctcggcgag gcggtcgcgg tcgcgcccat tgatgaccac ctcgcacccg gcctcggcca
     4801 gcgccttggc gcaggcccgg ccgagcccgc ggctggaggc acagacgatc gctttgcggc
     4861 cggcaatacc aaggtccatg cttacccccc ggtgggtgtt gcgccccagt gcgcagggcg
     4921 aattagcgca gcgccatgcc cggttcaagg aaaggattgg cagtccggcc gcggccatgc
     4981 ccgccggccc gccagggccg ccgggccatc acggccattt agccaccggc ggcatcgagg
     5041 agaggatcga ctcgacgttg ccgccggtac gcaggccgaa caccgtcccc cggtcataca
     5101 gcaggttgaa ctcgacatag cgtccgcggc gcacgagctg ctcgtcgcgc tcggcctcgg
     5161 tccagggctt ggcaaaattt cgccgcacca gcccgggata gacgccaagg aaggcgcggc
     5221 cgacctcctg ggtgaaagcg aaatcggctt cgaaatcgcc gctgtcgagc cagtcgtaga
     5281 agatgccgcc gatgccccgc atctcgccgc ggtgcttgag aaaaaagtat tcgtcgcacc
     5341 acgccttgaa cctgtcgtac ggcgcggccg ccgcgtgggc atcgcaagcg gccttcatcg
     5401 ccgcgtggaa ggcgaccgtg tcagggtcgt cctgggtacg ccggcctgcg agcaaggggg
     5461 tcaggtcggc gccgccgccg aaccaggctt ttgtcgtcac gacgaagcgg gtattcatgt
     5521 gcaccgccgg cacgtggggg ttgtgcaggt gggcgatgac cgaaacgccg ttggcgtaga
     5581 agcgcgggtc gtcggcggcg ccgggaacct ccttgcgaaa ttccggcgcg aactcgccaa
     5641 aaacggtcga gaggtggacg ccgaccttct cgaacacgcg tcctttcatc atcgccatga
     5701 cgccgccccc gcccggcgcg ccgcggtggt cggtgcggtt ccagggcgtg cgcacgaagc
     5761 ggccggcagt actggtccct tgcggcgcgt ccgcgggcag ggcgtcctcc agttcctcga
     5821 acgccgcgac gatccggtcg cgcaaggttt cggaccaggc acgcgcccgc cgcttgcgga
     5881 tttccaatcg gtcgacttcc atggtctgtc gggtcgaaaa ttgataacga gggcggaacc
     5941 tgcagaatgc aatttggtcc ggtgcttgca cagattgtca caaatctggg cgagtatcgg
     6001 tcccttggag ccgcaggccg ggccgtatca tgtccgtcag gttaacgcca aaccccttga
     6061 cccgccgccg cctgctcgcc ggcgcgggca gctcaggcct tctcctcgtc gcggcgccgt
     6121 ctttgctgcg gcatgcgacg gcccaggtct ggcgcgccgg agaccctttc agccttggcg
     6181 tcgcctcggg tgctccgcgc gccgacggct tcgtgctgtg gacacgcctt gcgcccgacc
     6241 ccctgtcgag caatccggcc acgcccggcg ggatgattgg gggcgacgtc accgtcggct
     6301 acgagatcgc ggacgatccg ggcatgcgcg agatcgtgcg ccgcggcgaa gcagttgccg
     6361 agcaggcgtt cgcctattcg gtgcatctcg atgtgcgcgg cttacaaccc ggccggccgt
     6421 actggtatcg cttcttaagc ggcgacgcgg cgagccgcgt cgggcgcgcc tcgacgttgc
     6481 cggcgccagg cgccgggctc gagcggctgc gcttcggctt cgtgtcctgc tccaactacg
     6541 agcacggcta cttctccgcc taccggcacc tcgccgacga gaatccggag gtcgtcctct
     6601 acctcggcga ctatatctac gaacacatcg aggaacggcg tccggtcgtg cgccgccact
     6661 cggacggcat cgaggcggcg acgctgccga cctaccgcaa tcgccacgcc caatatcggc
     6721 tcgacccgga cctacagcgc ctgcacgccg aagtgccggc gctcatcacc tgggacgacc
     6781 atgacgtgca gaacgactat gccgacaagt ggtcgcaata tttcgacgat cccgagctgt
     6841 tcctgttgcg gcgggcggcg gcctaccagg cgttctacga gcacatgccg ctgcgtccga
     6901 tcgtgtcgcg gccggaaggg ccgcggatgc ggatctatga ccgtttcagc ttcggcgacc
     6961 ttatcgaaat ctccatgatc gacggccggc agtaccgctc gcgcgagccc tgctacgcgc
     7021 cgcccgataa gggcggcatg catctcgaaa ccaatgccgg ttgtccggag cgcctggagg
     7081 ccggtcgcac catgctcggc tttgcccagg aggtttggct ccacagcaac ctcgcgcaca
     7141 gcaaggcgca atggaatttg atcgcgcagg acgtgttgat ggcgcagtac cgggtcaagc
     7201 agggcagtgc ggacgcgttc tcgaccgaca attgggacgg atatccagcg aaccgcgcgc
     7261 gcctgctcaa gcgcatccag cagacgcagg tgtccaatcc cgtggtcatc ggcggcgaca
     7321 tccattcgtt cttcgccaac gacctcaagc tcgatttcga caatcccgct tccccagtcg
     7381 tcgccaccga atttgtcggt acctcgatct cgtcccatgg gccgccgtac gaggtgatcg
     7441 cgccggcgct gccggacaat ccgcacgtgc acttcttcga gagccgccgg cgcggctatg
     7501 tctgcgtcga tctcgaccgc gcgcagatgc aggtgcgcat gcgcgtcgtc tccgacgccg
     7561 ccgaccccaa ggcggacatt tcaacgctga agacctttgc cgttgagggg ggccggcccg
     7621 gcgtcgtggc ggcctaaaag gcacgattcc gaaaggtgga aaccgatttc cgacaagatc
     7681 gtgcttcgct agcggaagcc ggagcgcaat cggttcaact tgaaaacgat tgcggcccgc
     7741 cgcgctcgcc ttactcggcg tcgagtttct ccgccagcca gaccttgatc agcgactgat
     7801 acggcacgtc gcgcttgttg gcggcgatct tgatacgatc gagcaggcct tgcggcaggc
     7861 gcagcgaaat ggcggtcgtg gacagcttaa ggttagggaa ccgcgccctt tgcgccttgc
     7921 tccaatcgac gtagtcggcc gaatcgtggg tctcccaaaa ctcccgttcc tccgcctcgc
     7981 tgcgaaaacg ggggatcgcc cctgtaatcg gtttaagctt tctgcgcata ggcggctctt
     8041 tccctgcggt tcgcgtcgcg cgcggagatc acgcgaattc tcgtttgatt gtcacggagc
     8101 gtgaacgtga catggagcaa gcggccttcg atcgtttgtc ctagcgcgtg atatcggggt
     8161 tcgtcctggc tgtgctttac atcatcggca agcagcaatt gctcgtcgaa gaaaatctgc
     8221 tctgcctcgg ctcgggatag ggaatgcttc gaagcgctct tgccgctgtt cgcttcgtcc
     8281 cagtcaaacc cgatggtttg gctcagatcg agcatgtttg tatattacca taacatacac
     8341 aatgcatcaa gctcggggat cggggccggt gcgaaagccg ccggtctgcc gcagcgcttc
     8401 gcctgccccg atcgccgcgg cggccgcgat attgagcgag cgcaggccgg gacgcatcgg
     8461 aatgaccagg cgagcgtcgg ccgcggcatg gacttccgcc ggcacgccgg ccgattcgcg
     8521 gccgaacagc aggatgtcgt ccgcctggta gcggtagtcg agataggaga gggcgccggc
     8581 ggtggtgaac agcacgaggc ggtggtcccc gccgcggtgc caggattcga aatcgcgcca
     8641 cgagcgatgc cgcacgatcg cgacagcatc gagatagtcc atcccggcgc gccgaaaagc
     8701 gcggtcggag gtcggaaagc cagccggccc gatgaggtgc gcttcgatgc cgaggcaggc
     8761 gcacaggcgc agaatcgtcc cggtattctg cgggatatcc ggttgataga gggcgatgcg
     8821 catcggagcg gctcgggcct tgcaaggccg ctgcggcagg cttgcagccg cgttggttgg
     8881 catacttgcg ctccggcggt aagggtgcca ataaaccgcc gccggattgc gttgcttctg
     8941 gtctccccca ggttggaagc caacgcggcc gtccgccgcc ggacccgctc cttccgtctc
     9001 ccgcagccgg gaggttgggg agagggtggt cggttcgcag cgcggatgga atgcccggca
     9061 agacggacga ggattgagac cgtgacgaca atctccgcag cggagccttc gcgccgcgat
     9121 ttcctcctcg ttgcgaccgg aaccgtggca gccgtcggcg cggccgcggc ccttgtcccg
     9181 ctgatcggcc agatggaacc ggacgcctcc accatcgccg ccggcgcccc gctcgatgtc
     9241 aatctcgcgc ccatcgccga gggccagatc gtcaaggtgt tctggcgcag caagccgatc
     9301 ttcatcttcc atcgcagcaa gcgcgacatc gacagcgcgc gcgaggtgaa ttggcacacg
     9361 ctgcccgatc cggcgccgga ttcagcgcgg gtgcaggccg gccacgagca gtggctcgtc
     9421 ctgatcggca tctgcacgca tctcggctgc attccgctgg cgcatcaggg caactatgac
     9481 ggctggttct gcccctgcca cggctcgcag tacgacactt ccggccgcat ccggcagggt
     9541 ccggcgccgc tcaatctcgc gctgccgccc tataaattcg tctccgacac cacgatccgg
     9601 atcggcgaaa ccgcgcccgc caaagcataa ggttcgatca tgagcggaca ttcgatctac
     9661 aagccgcaaa gccccttcat gcggtggttg gaacggcggc tgccgatcgc gagcctcgtc
     9721 tattcgtcct tcatcaccta tccgacgccg cgcaatctga actattggtg gacgttcggc
     9781 gccattctca ccttcatgct cggcgcgcag atcgtgaccg gcatcgtgct ggcgatgcac
     9841 tacacgccgc acgtcgacta cgctttcaac tcggtcgaat cgatcatgcg cgacgtcaac
     9901 tacggctggc tgctgcgcta tctgcattcg aacggcgcct cgttcttctt cgtcgccgtc
     9961 tatgcccaca tcgcgcgcgg catgtattac ggctcctaca aggagccgcg cgaggtgctg
    10021 tggattctcg gcgtcatcct gttcctgctg atggtggtga ccggcttcat gggttacgtg
    10081 ctgccgtggg ggcagatgag cttctgggcg gcgactgtga tcaccaacct gttctcggcg
    10141 atccccttgg tcggcgaccc gatcgtcacc tggctgtggg gcggctatgc cgtcggcaat
    10201 ccgacgctca accgcttcta ctccctgcac tacctcttgc cgttcgtcat cgtcggcgtc
    10261 gtcgtgctgc acatctgggc gctgcacatg gtcgggcaaa acaatccgac cggcgtcgaa
    10321 cccaaggccg agaaggacac ggtcgcattc acgccctacg ccaccgtgaa ggacgttttc
    10381 ttcaccggcg tgttctgtct gttctttgcc tggttcgtgt tctacatccc gaattatctc
    10441 ggccatccgg acaactacat tcccgccaac cccgggcaga ccccgccgca tatcgtcccg
    10501 gaatggtact acctgccgtt ctacgccatt ctgcgcgcca ttccgaacaa gctcctcggc
    10561 gtcatcgcgc tcggcggctc gatcgtcctg cttgctttcc tgccctggct cgacacctcg
    10621 cgggttcgct cggccgagta tcggccgctg taccggcaat ttctcttcgt cttcttcgcg
    10681 gtcgtcatcg gcctcggtta tctcggctcg cggccgccgg agggcggata cgtgatcacg
    10741 gcgcggatac tcaccgcgta ttatttcgtc ttcctgctcg tcatcctgcc gctgctcggc
    10801 ctgttcgaga cgacgaagcc tttgcccaac tcgatctcgg aatcggtatc gcgcgaaggc
    10861 cttcccgccg gcgcgtcggc gccgccgccc tcgggcgcca aggcgtagag gagggccggc
    10921 catgcatgct cgtcgcgccg tcattgtcag cctggcgttt gcggctttcg ttgcagtgcc
    10981 gatcgggtgc gcggccgtgg cgcaggagca agaggcgccg ccgcggcagc gctggtcgtt
    11041 cgccgggcct ttcggcatgt acgacccgca gcagctccag cgcggcttca agatctatcg
    11101 cgaggtctgc tccgcctgcc acagcctcaa gctcgtggcg ttccgcaacc ttgccgatcc
    11161 cggcggcccg ggcttcaccg aggagcaggc ggcggctgtc gcggccgagt tcaaggtcca
    11221 ggatggcccg aacgaccagg gcgaaatgtt ccagcgaccg ggccgcctcg ccgatcattt
    11281 tccgccgccg ttcgccaacg atcaggcggc gcgcaatgcc aacggcggcg cgctgccgcc
    11341 ggacatgtcg gtgctggcca aggcgcgcgg cttcgagcgc ggctttccgt ggttcatctt
    11401 cgatgccttc acccaatacc aggaggatgg gccggactat atccacgcca ttctcgacgg
    11461 ctacgcggac gcgcccgccg ggttcgcgct gccgccgggc gcgcaataca acaaatattt
    11521 tcccggccac gccatcggca tgcccaagcc gctgagcgac gggcaggtcg aatacaccga
    11581 cggcacgccg acaactgtgg accagtacgg ccgcgacctc gccgcttttc tgatgtgggc
    11641 ggccgagccg acgcaagacg cgcgcaagcg gctcggcttt caggtgttca cgtttttgat
    11701 cgtgctgacg ggtctcctgt acttcaccaa gaagcgggtc tggcatgagg tcctgcatca
    11761 cccgaagtcg ctcgagccgc gctcgccgac ggagtatcgg cgcggctgat ggccggccgg
    11821 cgctcagaac gaccgccgca tcatgacgaa gccgccgtca ccggcgaggc cggcgaaaag
    11881 ggccgtgacc agcatcaata gaaaaccgac gatgatggct gcaggaatgg cggcgaacgc
    11941 cgctttgacg aagaacagca ccagacggac gaagggaatg cgcagatcga caacgacgac
    12001 gcgctggcca gtctcggtca tgacagggtt ctccggttgc gccggccgtc atggttcgcc
    12061 agagtgacgc cggctgcaag ctcttcgcgc tgaatggaat ggggccccgc tcatgaccac
    12121 cctggcactg gaa
//
LOCUS       DATMQB010000117        12414 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1893544, whole genome shotgun sequence.
ACCESSION   DATMQB010000117 DATMQB010000000
VERSION     DATMQB010000117.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 12414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12414
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1893544"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..426
                     /locus_tag="VNY79_03720"
     CDS             <1..426
                     /locus_tag="VNY79_03720"
                     /EC_number="1.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009030920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004146 - dihydrofolate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HWX71588.1"
                     /translation="MGRKTFLSIGKPLRGRTTIVVSRDREFTASGAVVAPSLDAALAA
                     ARGDALRRQVDTIVVAGGAEIYAQALPFASRLIITRVHRRVAGDAYFPAIDPEVWRET
                     AREEHAPAEGDDSAFAFVTCQRQSAAVASEREKRGRAPG"
     gene            542..1684
                     /gene="hflK"
                     /locus_tag="VNY79_03725"
     CDS             542..1684
                     /gene="hflK"
                     /locus_tag="VNY79_03725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsH protease activity modulator HflK"
                     /protein_id="HWX71589.1"
                     /translation="MPWSNQSGGPWGSGPRGPWGSGPQQQGPRPPDLEEFLRRSQDRL
                     RSVLPGNLGGRGVALIALAAVVLWGFSGFFRVEPDELGVVLRFGKFVREVQPGLNYHL
                     PYPIETALTPPALRVNKIDVGTLPVENVRRGAPVREVPEESLMLTGDENIVDVDFSVL
                     WRVKPNGVGDYLFNIQNPEGTVKAVAESAMREVIGRSTIQPILTGARQNIETGVQQLM
                     QKTLDNYGAGVLVQQVQLQKVDPPTQVIDSFRDVQAARSDLERAQNEAQTYANRVVPE
                     ARGRAAKVTQDAEAYREQTVAEAKGQTSRFLQIYDQYKKAPDVTRERMYLETMERVLG
                     GSEKTIIDTGPQQTSPGVVPYLPLTELPRQRPPSPAGSPSSSGASQ"
     gene            1681..2619
                     /gene="hflC"
                     /locus_tag="VNY79_03730"
     CDS             1681..2619
                     /gene="hflC"
                     /locus_tag="VNY79_03730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0045861 - negative regulation of
                     proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protease modulator HflC"
                     /protein_id="HWX71590.1"
                     /translation="MKQSLAGVGFAVVLLLVVIVGYSTLFTVNQTKQALVVRLGEPVR
                     VITEPGLNVKVPFIDSVIYVDKRILDLESPAQEVIASDQKRLVVDAFARYRVKDPLKF
                     YQTVGETGANSQLAILLNSALRRVLGEATLTEVVRDVREQLMARVREQLDHEAQSFGI
                     QVVDVRIRRADLPEQNSQAVYQRMQTERQREAAEFRAQGSQKSQEIRARADRDVTVLL
                     AEANSQAEQARGQGDSERNRIFADAYNRDPDFFAFYRSMQAYEKSLQHGDTRLVLRPD
                     SDFFRYFSTPLPRARAEAAAPPAPQKPAASPAPDAK"
     gene            2665..2850
                     /locus_tag="VNY79_03735"
     CDS             2665..2850
                     /locus_tag="VNY79_03735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002964504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2065 domain-containing protein"
                     /protein_id="HWX71591.1"
                     /translation="MSDFLAAIGLFFAIEGILFAAFPMTAKQAMAAALGVPDSRLRLA
                     GLVSGALGVLIVWLVRG"
     gene            3062..4546
                     /locus_tag="VNY79_03740"
     CDS             3062..4546
                     /locus_tag="VNY79_03740"
                     /EC_number="3.4.21.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Do family serine endopeptidase"
                     /protein_id="HWX71592.1"
                     /translation="MSCHLYGLPRPALALAALAAAIALALARPAAARGPENIADVAEQ
                     VIDAVVNISTSQKVDARMSGVPDLPPGSPMEEFFDEFFKNRRGGQGGGDQDRPARRVN
                     SLGSGFIIDSSGLVVTNNHVISDADEISVILNDGAKLTAELVGKDSKSDLAVLRVRPD
                     KPLKAVKFGDSDKLRLGEWVIAIGNPFSLGGTVTAGIVSARNRDINSGPYDNYIQTDA
                     AINRGNSGGPLFNLSGEVIGVNTAIISPSGGSIGIGFAVPSNSALAVIEQLRQFGETR
                     RGWLGVRIQQVTDDIAESLSIKPAHGALVAGLDDRGPAKPAGIEPGDVIIRFDGRDIK
                     DMHDLPRIVADTPVGKEVDVVVIRKGKEETHKVKVGRLEDGEKLAAANKKDSAPEEKS
                     VVQKTLGLELSSLTDDLRKKYKIRDNIKGVIITAVDPSVAAAPPDKRLSSGDVIVEVQ
                     YQSVGNPTDLQTRLDQLKGQGKKVAVLLVSNADGETRFVALSLQ"
     gene            4651..5075
                     /gene="ssrA"
                     /locus_tag="VNY79_03745"
     tmRNA           4651..5075
                     /gene="ssrA"
                     /locus_tag="VNY79_03745"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF01849"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="alphaproteobacterial-type; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /db_xref="RFAM:RF01849"
     gene            5191..5742
                     /locus_tag="VNY79_03750"
     CDS             5191..5742
                     /locus_tag="VNY79_03750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012045982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClpXP protease specificity-enhancing factor
                     SspB"
                     /protein_id="HWX71593.1"
                     /translation="MAFDHIRYDVLAQAALRGVVRTVLADVAKNGLPGEHHFRITFNT
                     MAPGVRLSDRMRAQYPQDMTIVLQHQFWDLAVTEQAFEVGLSFGGIPERVGAPFEAVT
                     AFYDPAVQFGFQFEAVDGGAAAEASAATQTVDKSAAPAPALTAGERPEPLPAPAAVTP
                     PAPAPDGADAGGEVVRLDRFRKK"
     gene            5828..7219
                     /gene="fumC"
                     /locus_tag="VNY79_03755"
     CDS             5828..7219
                     /gene="fumC"
                     /locus_tag="VNY79_03755"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HWX71594.1"
                     /translation="MKTRIETDSMGPIEVAADRYWGAQTERSRINFRIGEERMPRPLI
                     TALAIVKRAAAQANLELGVLDARWAKAIIQVADEVIAGKLDDHFPLVVWQTGSGTQTN
                     MNMNEVIANRANELLGGTLGSKSPIHPNDHVNMSQSSNDCFPTAMHIAAVEEIAGRLL
                     PALAHLHAALEAKTKAFASIIKIGRTHVQDATPLTLGQEFSGYAAQVKSGITRIRAGV
                     KELYPLAQGGTAVGTGLNAKREFGKVFATKVAAITGLPFVSAPNKFEALASHAALTFA
                     HGALNALAADLFKIANDIRLLGSGPRSGFGELILPENEPGSSIMPGKVNPTQCEALTM
                     VCCRVFGNDTTITVAASQGHFELNTYKPVIIYAALQSIRLIADAAVSFTDHCIAGIRA
                     NEPRIREAMERSLMLVTALTPRIGYDKAAQIAKAAHANGTTLREEAVRLGFVSAEEFD
                     RLVQPARMTRPDS"
     gene            7863..8162
                     /locus_tag="VNY79_03760"
     CDS             7863..8162
                     /locus_tag="VNY79_03760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribbon-helix-helix domain-containing protein"
                     /protein_id="HWX71595.1"
                     /translation="MKSPVIKRSIVIAGHKTSVSLENAFWRGLKEIAQSRGVTLSDLV
                     AAIDSERQLGNLSSAIRLFVLDHYKARIGVHADGRPAPREMMMMPPSAASVMRAE"
     gene            complement(8142..11915)
                     /locus_tag="VNY79_03765"
     CDS             complement(8142..11915)
                     /locus_tag="VNY79_03765"
                     /inference="COORDINATES: protein motif:HMM:NF017021.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HWX71596.1"
                     /translation="MQTTLLGLGIAIILALVSALAAPLVIDWNRYRPRFEQEASRLTG
                     LAVRVNGTIEARILPTPRIKLADVAVGAAGQKPQIQAATLELEVSLGPLLRGEVEATE
                     LHLVAPKINLGLDRNGAVDWPSISPSLSPDRLTISHLTIDDGQAVLTDAASGFRLVLK
                     ELAFKGDVRSFGGPFKGEGAFRSGDQVYGYRIAATRPEDGGALRLKVGVDPAGYQLTT
                     EIEGTLNLDHGAPQFDGTLAARPVTAALARGERVTTDVWHLAGKLRMASASASLQELA
                     FQFGPEEAAINLNGSAELTLGEHPHLDGAISAKQVDLDRALATPDAPLRPPFVLIRSA
                     VEAFFAAAAKPPIPTKIAVALDAMTLGGSLLESVHGNIGFDGKGWNLDGLELRAPGAT
                     EVKLSGRLDDSPKGLTFSGPASLETHDLKVLVARLEGRGNPAPSAAQTLSARGVVTIG
                     RDRFALERMTATLDQENVTGRLAYSWTTGTRPAVLDGEIHAAALDVDTLAAFAKAAAS
                     DASFEVPHEVALVLDIGKARIAGVDAQTVNARVKLDAGVLHIERLSVGDLGGAALDVS
                     GRIDDLYAQPRGRLTLDLDAKALAGVTGFVGTFAPRTADWFRRIADRLAPAKIHGVLT
                     VERASASGSLAKLDLSGKAGALRVALNGQANGAADHPGDAVVRIDSRLDSDGGSALVS
                     LLGLDRAVAVDQTPGQMVISAAGQLGGNLRVNGIANAGGFSAAVDGALRLNGDEASIG
                     TLQVKVSAADLRPLRRAMTGQAGVAMPISARATVAVSDTDMSFTNLTVTAGKTSVRGR
                     LGLKLSSPIKIDGDIAADDVDAAALSAMLLGLPVAAAAGGNSWSSELIGAGVFSTANG
                     SLAFKFDHAAFSPTLAARDLTGVVRLQPARIAVNDIGGSIAGGRLGGELTFHRNADGF
                     AGQGHIDLAGAEAAKLFGSNTKAVDGVVTLSLQGDSTGLSPEGLIGALRGSGSIALMD
                     VHFGGIDAGAFDTAIRTADQSGSVDAAKIRAAVAAVMDRGRLAVLKGGADLTMAGEQI
                     RVSNATLQLQDGAELLLSGSLDFGKGAVDARMTLAGRPAANPLAGAKPELSVTLKGPL
                     AAPERTVDVSSLLGWLTLRSTELQTRRLQWLEANGRPDVSGAAVVRPGSPAVRFLPLG
                     TVLESGASANTPAPRGAGTAERLQPTPPGLVPDDTHSDAGGTSRGAAAAIAMPPTAPH
                     TDNSAGITGTAAPPPRRATPAAPTPQAAPPQAAPRATAPAARSPLELLFGSHN"
     gene            complement(12119..>12414)
                     /locus_tag="VNY79_03770"
     CDS             complement(12119..>12414)
                     /locus_tag="VNY79_03770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HWX71597.1"
                     /translation="NLVAPIVGHVGDGNFHVGLMVDLDDREEVARVEAFLERLVERAL
                     AMDGTCTGEHGIGQGKMKYMQAEHGEGALAAMRAIKRALDPLDIMNPGKVVNL"
BASE COUNT         2124 a         4235 c         4069 g         1986 t
ORIGIN      
        1 atggggcgca agacctttct ttcgatcggc aagccgctca gaggacgcac caccatcgtc
       61 gtaagccgtg atcgcgaatt cacggcttcg ggcgcggtgg tcgcgccgag cctcgacgcc
      121 gcccttgccg ccgcccgcgg ggacgccctg cgccggcagg tggacacgat cgtcgtcgcc
      181 ggcggcgccg aaatctacgc ccaagcgctg cccttcgcgt cgcgcctcat catcaccagg
      241 gtccatcgcc gcgtcgcggg cgatgcgtac tttccagcga ttgatcccga agtctggcgc
      301 gagaccgcac gcgaggagca tgcgccggcc gaaggcgacg acagcgcttt cgccttcgtc
      361 acctgccagc gtcaatccgc cgccgtggcg tccgaacgag agaagcgagg tcgagcgccg
      421 ggctgacccg caggtgaagg gccaacgcgg cattgctgcg cgttgcaagg agcagtgcac
      481 ttccctatat ccgcatccat gccggctggg ttggcccggc gctcaggaga tcttttaccc
      541 gatgccgtgg agcaaccagt ccggcggccc ctggggttcg gggccgcggg gaccctgggg
      601 ctcgggtccg cagcagcaag ggccgcggcc gcccgatctc gaggaattcc tgcgccgcag
      661 ccaggaccga ttgcgcagcg tgctgccggg caatctcggc ggccgcggtg tggcgctgat
      721 cgcgctggcg gcagtcgtgc tctggggctt ctccggcttc ttccgcgtcg agcccgacga
      781 gctcggcgtg gtgctgcggt tcggaaagtt cgtgcgcgaa gtgcagccgg ggctgaacta
      841 ccacctgccc tatccgatcg agaccgcgct gacgcctccg gcgttgcgcg tcaacaagat
      901 cgacgtcggc acgctccccg tcgagaacgt gcgccgtggc gcaccggtgc gtgaagtgcc
      961 ggaggaaagc ctgatgctca ccggcgacga gaacatcgtc gacgtcgatt tctccgtgct
     1021 gtggcgggtc aagccgaacg gggtcggcga ttatctgttc aacatccaga accccgaggg
     1081 aacggtgaag gcggtcgccg aaagcgcgat gcgcgaagtg attgggcgct caaccatcca
     1141 gccgatcctc accggtgcgc ggcagaacat cgagacgggg gtgcagcagc tgatgcagaa
     1201 gaccctcgac aattacggcg ccggcgtcct ggtgcagcag gtgcagctgc agaaggtcga
     1261 tccgccgacc caggtcatcg attccttccg cgacgtgcag gcggcgcgct cggatctcga
     1321 acgcgcgcag aacgaggcac agacctacgc caatcgcgtg gtgccggagg cgcgcggccg
     1381 cgccgccaag gtcacccagg acgccgaggc ctatcgcgag cagaccgtcg ccgaggccaa
     1441 gggccagacc tcgcgcttcc tgcagatcta cgaccagtac aagaaagcgc cggacgtgac
     1501 ccgcgagcgc atgtatctcg aaaccatgga acgcgtcctc ggcggcagcg agaagacgat
     1561 catcgatacc ggcccgcagc agacgagccc cggcgtggtg ccttacctgc cgcttaccga
     1621 gctgccgcgc cagcgtccgc cgtccccggc cggcagcccg tcgtcttccg gagccagcca
     1681 atgaagcaga gccttgccgg agtgggcttc gccgtcgtgc tgctgctcgt cgtcatcgtc
     1741 ggctacagca ccctgttcac cgtcaaccag accaagcagg ccctggtggt gcggctcggc
     1801 gagccggtgc gggtgatcac cgagcccgga ctcaacgtga aagtgccgtt catcgacagc
     1861 gtgatctacg tcgacaaacg catcctcgac ctcgaatcgc cggcgcagga ggtgattgcc
     1921 tccgaccaga agcgtctagt cgtcgacgcc ttcgcgcgct atcgcgtcaa ggatccgctc
     1981 aaattctacc agacggtcgg cgagaccggc gcgaactcgc aactcgcgat cctgctcaac
     2041 tcggcgctgc ggcgcgtgct cggcgaggcc acactgaccg aggtcgtgcg cgacgtgcgc
     2101 gaacagctga tggcgcgcgt gcgcgagcag ctcgaccatg aggcgcagtc gttcggcatc
     2161 caggttgtcg acgtgcgcat ccgccgcgcc gacctgccgg agcagaacag ccaggcggtg
     2221 taccagcgca tgcagactga gcgccagcgc gaagcggccg agttccgcgc ccaaggaagc
     2281 cagaagagcc aggagatccg ggccagggcc gaccgcgacg tgaccgtgct gctggccgag
     2341 gccaactccc aggccgagca ggcccgcggt cagggcgaca gcgagcgcaa tcgcatcttt
     2401 gccgacgcgt ataaccgcga tcccgacttc ttcgctttct accgttccat gcaggcctac
     2461 gagaagagcc tgcaacacgg cgatacgcgg ctggtgcttc ggcctgattc ggatttcttc
     2521 cgctacttct ccacgccgtt gccgcgggcc cgcgcggaag cggcagcccc gcccgcgccg
     2581 cagaaaccgg cggcctcccc cgcgcccgac gccaaatagg cttttcgtca agttgcgccc
     2641 gccgtacccc cggggcccgc aggcatgtcc gacttcctgg ccgcgatcgg attgttcttc
     2701 gcgatcgaag gtattctctt tgccgcattc ccgatgaccg cgaagcaagc gatggctgca
     2761 gcacttggcg tgccggatag ccgattgcgc cttgcgggcc tcgtttcggg ggcgctcggc
     2821 gtgctcatcg tctggttggt gcgcggctga ggcgcgtttg ttcggcggga cggcgcggca
     2881 gatcgtgccg gcacggcgcg cgacgcgggg gggcgcgcgg cgtgacgccg ggatagaccg
     2941 gtccgccttt ccgccccaat cccgttccta actgccgctg cgccgccggt atgggcttgc
     3001 gtccgacccc ggacgggggc acatccttcc agaactcaat gcttcaggag cacagacgtc
     3061 catgtcttgc catctgtacg gtttgccgcg gcccgctctg gcgctcgccg cgcttgcggc
     3121 ggcgatcgcg ctggcgctcg cccggccggc ggcagcgcgc ggaccggaaa acatcgccga
     3181 cgttgccgaa caggtgatcg acgccgtcgt caacatctcg acgtcgcaga aggtcgacgc
     3241 gcgcatgagc ggggtgcccg atctgccgcc tggttcgccg atggaggagt ttttcgacga
     3301 attcttcaag aaccggcgcg gtggccaggg cggcggcgat caggaccgtc cggcgcggcg
     3361 ggtcaactcg ctcggctccg gtttcatcat cgattcctcc gggctcgtcg tcaccaacaa
     3421 tcacgtcatt tccgatgccg atgagatcag cgtcatcctc aacgacggcg ccaagctcac
     3481 ggccgaactc gtcggcaagg actcaaagag cgatctcgca gtgctgcgcg tgcgccccga
     3541 caagccgctc aaggcggtga agttcggcga ttccgacaag ctgcggctgg gcgaatgggt
     3601 catcgccatc ggcaacccgt tcagcctcgg cggcacggtc accgccggca tcgtctccgc
     3661 ccgcaaccgc gacatcaatt ccggccctta cgacaactac atccagaccg acgccgccat
     3721 caatcgcggc aattccggcg ggccgctgtt caacctcagc ggcgaggtga tcggcgtcaa
     3781 caccgcgatc atttcgccgt ccggcggctc gatcggcatc ggcttcgcgg tgccgtcgaa
     3841 ctcggcgctt gccgtcatcg aacagctccg ccagttcgga gaaacgcggc gcggttggct
     3901 cggcgtgcgc atccagcagg tcaccgacga catcgccgaa agcctgagca tcaaaccggc
     3961 gcacggcgcg ctcgtcgccg gcctcgacga ccgcggcccg gcgaagcccg ccggcatcga
     4021 gccgggtgac gtgatcatca ggttcgacgg ccgcgacatc aaggacatgc acgatctgcc
     4081 gcgcatcgtc gccgatacgc cggtgggcaa ggaggtcgat gtcgtcgtca tccgcaaggg
     4141 caaggaagaa acccacaagg tcaaggtcgg ccgcctcgag gacggcgaaa agctcgccgc
     4201 cgccaacaag aaggattcgg cgccggaaga aaaatccgtc gtgcagaaga cgctgggcct
     4261 cgaactctcc agcctcaccg acgatctgcg caagaagtac aagatcagag acaacatcaa
     4321 gggcgtgatc atcaccgcgg tcgatccgag cgtcgccgcg gcgccgcccg acaagcggct
     4381 ttcctccggc gacgtcatcg tcgaggtgca ataccagagc gtgggcaatc cgacagacct
     4441 gcagactcgg ctcgatcagc tcaagggcca gggcaagaaa gtcgcggtcc tgctcgtctc
     4501 caacgccgac ggcgagaccc gcttcgtggc attgagcctg cagtaagcgg cgcattcgca
     4561 ccgtcggcga ctcccgacgg gttgcgcgca agcgcaattc accgcggctg tgggcgcggc
     4621 gggcttgagc cgccgcgccc acagccgcac cctctttttt cgtcaatgct ttgcgcttat
     4681 attccgtggc gccggagcaa tccggctatg gcgataaatg gccgtcgaaa taaacctttc
     4741 ggacccgggg gcagtacccg gcgactccac caatttggag ggcaggcgac agacggcaga
     4801 tgacagaccg ggcgtccttg cagccggcga tttgtcttct gcgttctgat ctcggtcctc
     4861 cgcctgcggg gtcgaaatag gatcgacgag ggcgtaaagg acgtgctttt gctcggcatg
     4921 gttccgccgt tatcgggcca aactcatagt tgccaacgac aactatgctc cggttgctct
     4981 ggctgcgtaa gcagcttgaa agaccgatct gaagccctgg cgtcttagca gcgtcaggcg
     5041 gggttcggag gcacctggca acagaagcct ccactttttt ggaggacgga agacggacga
     5101 cagaggacag aatcggtctg ggcctctatc atcgatctgt cctcggtcac tccgtcgcgc
     5161 gtcatcgtcg tccgtcagcc gtcgtctgcc atggccttcg atcacattcg ttatgacgtt
     5221 ctcgcgcaag cggccctgcg cggcgtcgtg cgcaccgtgc tcgccgacgt cgccaagaat
     5281 ggcctgccgg gcgaacatca tttcaggatc accttcaaca ccatggcccc gggcgtgcgg
     5341 ctgtccgacc gcatgcgggc gcaatatccg caggacatga ccatcgtcct gcagcatcaa
     5401 ttctgggacc tcgccgtaac cgaacaggcc ttcgaagtgg gcctgtcgtt cggcggcatt
     5461 cccgaacgcg tgggcgcacc cttcgaggcg gtgacggcgt tctacgatcc ggccgtccag
     5521 ttcggcttcc agttcgaagc cgtcgacggg ggcgcggcgg cggaagcgtc tgctgcgacc
     5581 cagactgtgg acaaatcggc cgcgccggcg ccggcgctga ccgccggcga acggccggaa
     5641 cccttgccgg ctcccgctgc cgtgacgccg cccgcgcccg cccctgatgg cgccgatgcc
     5701 ggcggcgaag tcgtgcggct ggaccggttc aggaagaaat gagagccagc gagcggtcga
     5761 cgaccggcga cggacggcag gcgctaaaga agctgttcca ccggtcgtcc gtgctccatc
     5821 tccggcaatg aaaacgcgta tcgagaccga ttccatgggg ccgatcgaag tcgcagccga
     5881 tcggtactgg ggcgcgcaga ccgagcgctc gcgcatcaac ttccgcatcg gcgaggagcg
     5941 catgccgcgc ccgctgatca cggcgctcgc gatcgtcaag cgggcagcag cgcaagccaa
     6001 tctcgaactc ggcgtgctcg acgcgcggtg ggcaaaggcg atcatccagg tcgccgacga
     6061 ggtcatcgcc ggcaagctcg acgatcattt cccactggtc gtatggcaga ccggatcggg
     6121 cacgcagacc aacatgaaca tgaacgaggt gatcgccaat cgcgccaacg aactgctcgg
     6181 cggcacgctc ggcagcaagt cgccaatcca tcccaacgat cacgtcaaca tgagccagtc
     6241 gtcgaacgac tgctttccca ccgccatgca catcgcggcg gtggaggaga tagccggacg
     6301 gctccttccg gcgctcgcgc atctgcatgc ggcgcttgag gcaaagacga aggcgtttgc
     6361 ctcgatcatc aagatcggcc gcacccatgt tcaggacgcc acgccactga cgctcggcca
     6421 ggaattttcc ggctacgcag cgcaggtcaa gtccgggatc acccgcatcc gcgcgggcgt
     6481 gaaggaactc tacccgctgg cgcaaggcgg cactgcggtc ggcaccgggc tcaacgccaa
     6541 gcgcgaattc ggcaaggtgt tcgcgacgaa ggttgcggcg attaccggcc tgccgttcgt
     6601 gagcgcaccg aacaaattcg aggcgctcgc gtcgcacgcc gccctcacct tcgcgcacgg
     6661 cgcgctcaac gcgctggccg ccgacctgtt caagatcgcc aacgacatcc gcctgctcgg
     6721 ctccggcccg cgctccgggt tcggcgaatt gatccttccg gaaaacgagc cgggatcatc
     6781 catcatgccg ggcaaggtca atccgaccca atgcgaggcg ctgaccatgg tgtgctgccg
     6841 cgtgttcggc aacgacacca cgatcaccgt cgcggcaagc cagggccatt tcgagctcaa
     6901 cacctacaag ccggtgatca tctacgcggc gctgcagtcg atccggctca tcgccgacgc
     6961 agcggtctcg ttcaccgacc attgcatcgc cggtatccgt gccaacgagc cgcgcatccg
     7021 cgaggcgatg gagcgctcgc tgatgctggt caccgcgttg acgccgcgga tcggctacga
     7081 caaggcggcg caaatcgcca aggccgcgca cgccaacggc accacgctgc gggaagaggc
     7141 ggtcagactc ggcttcgtat cggccgagga attcgatcgg ctggtgcagc ccgcgcggat
     7201 gacgcgcccg gattcgtgat cggccccgcc cccgcccctg caccctgacg ctgcgtcaac
     7261 gccgaaaggt cgcccaaaag ccgcgccttt gacgaccggc accgatgaaa gcgcgacata
     7321 gagcggttgc gcagtcccct cggcagtgtc tgcatgcagg attgagaatg agtcgcaata
     7381 ttcatcgact ctgacgtaac gtttctcggg gcgacgactg atgctctacg agctggaatt
     7441 gtgacaaata cctgttgaag ctgcccgcat tatttggctg gacgcgcttt tgtcccatgg
     7501 gctgcccttg cgggggccga gacactcaaa ggaggtatct ctttttcaaa gaatattgtg
     7561 ttgcctgggt ggacggtatg gccacactcc tgactcgcaa gtgtagagtc gcaacgcgtc
     7621 accgtatcgg cgtaattttt ccggaccacg caggcccgaa tggccgcagc cacctcatct
     7681 ggtaccgcca cgctttgaat gggtgacctc gtcaatctgc ggatagagcg aaagcgcctc
     7741 acgcggcggc gagccggaca aacggctccg tgcccgcagc ctcgtcgaca cgcccggagc
     7801 aggtccgcaa cgacagagcc cacgaggacc tggccctacc ggatcgaaac gggagacggg
     7861 caatgaaatc gccggtcatc aagcgatcaa tcgtcatcgc cggccacaag acaagcgtca
     7921 gcctcgaaaa tgcattctgg aggggtctca aggagatcgc gcagagccgc ggtgtaaccc
     7981 tctcggacct cgtcgcggcg atcgattccg agcgacagct cggcaacctg tcgtcggcga
     8041 tcaggctgtt cgtcctcgac cactacaagg cgcgtatcgg cgtgcacgcc gacggccgcc
     8101 cggcaccgcg cgaaatgatg atgatgccgc cttcggccgc gtcagttatg cgagccgaat
     8161 agcagttcga gcggcgatcg cgccgccggg gcggtggcgc gaggcgcggc ctgcggcggc
     8221 gcggcctgcg gcgtcggcgc cgccggcgta gcacgacgcg gcggcggggc ggcggttcct
     8281 gttatcccgg cggagttgtc ggtgtgcggc gccgttggcg gcatcgcaat cgcggcggcg
     8341 gcgccgcggc tggtgccgcc ggcatccgaa tgcgtgtcgt cggggaccaa gccgggcggg
     8401 gtgggctgaa ggcgctcggc ggttccagcc cctctgggcg ccggcgtatt ggccgaagcc
     8461 cccgattcga gcacggtccc gagcggcagg aagcggacgg ccggcgagcc ggggcgtacc
     8521 acggcggcgc ccgaaacgtc cggccgcccg ttggcctcga gccattgcag gcggcgggtc
     8581 tgcagctcgg tggaccgcaa ggtcagccaa ccgagcaatg acgaaacgtc gactgtccgc
     8641 tcgggcgcgg cgagcgggcc cttgagcgtg acagaaagtt ccggcttggc tccggccaac
     8701 ggattggccg ccgggcggcc ggccagcgtc atccgcgcat caaccgcgcc cttgccgaag
     8761 tcgagcgaac cgctgagcag aagctcggcg ccgtcttgga gctgcagcgt cgcgttggag
     8821 acacggattt gctcaccagc catggtcagg tcggcaccgc ccttgagaac ggcgagccgg
     8881 ccgcggtcca tgaccgccgc gaccgcggcg cgaatcttcg ccgcgtcgac cgagccgctc
     8941 tggtcggcgg tacgaatggc ggtatcgaat gcgccagcgt cgatccctcc gaaatgcacg
     9001 tccatcagcg cgatcgagcc gctgccgcgc agagcgccga tcaaaccttc ggggctcagt
     9061 cccgtgctgt cgccctggag ggacaatgtc accaccccgt cgaccgcttt ggtgttcgat
     9121 ccgaagagct tggcggcttc ggcgccggcg aggtcgatgt gtccctggcc ggcaaagccg
     9181 tccgcattgc ggtggaacgt caactcgccg ccgagccgac cgccggcgat gctgccgccg
     9241 atatcgttca cggcgatccg agccggctgc aaccgcacca cgcccgtgag gtcgcgggcg
     9301 gccaaggtcg gcgaaaaagc cgcgtgatcg aacttgaacg cgagggatcc gttggcggtc
     9361 gagaatacgc cggcgccgat cagttcggat gaccaggagt ttccgccggc ggccgccgcg
     9421 acgggcaggc ccaacagcat tgccgacagc gctgcggcgt cgacgtcatc ggccgcgatg
     9481 tcgccgtcga tcttgatcgg actggaaagc ttgagcccca agcggccgcg cactgacgtc
     9541 ttgccggcgg tgacggtcag gttcgtgaac gacatgtccg tatcgctcac cgcgaccgtt
     9601 gcacgcgcgg agattggcat cgcgacgccg gcttgtcccg tcatcgcccg ccgcaatggc
     9661 cgcagatcgg cggccgacac ttttacctgc agcgtgccga tcgaggcttc gtcgccgttc
     9721 aaacgcaacg ccccatcgac cgcggccgag aagccgcccg cgttggcgat gccgttgacg
     9781 cgaaggttgc cgccgagctg cccggcggcc gaaatcacca tctggccagg ggtctggtcg
     9841 actgcgaccg cccggtcgag gccgagcagg ctcaccagcg cgctgccgcc gtcggaatcg
     9901 aggcggctgt cgatccgcac gacggcgtcg cccggatgat ccgccgcgcc gttcgcctgg
     9961 ccgttgaggg cgacacgcag cgctcccgcc tttccgctga gatcgagctt ggcgagactg
    10021 ccggatgccg acgcccgctc gaccgtcagc acgccgtgga tcttggccgg ggccagccgg
    10081 tcggcgattc ggcggaacca gtccgccgtc cgcggcgcga aggtgcccac gaagccggtc
    10141 acgccggcca acgccttggc gtcgagatcg agcgtcaaac gtccccgcgg ctgcgcgtaa
    10201 aggtcgtcga tgcgtccgct gacatcgagg gccgcgccgc cgagatcgcc caccgagagc
    10261 cgctcgatgt gcaatacgcc ggcgtcgagc ttgacccggg cattgaccgt ctgcgcgtcg
    10321 acaccggcga ttctcgcctt gccgatatcg agcacgagcg cgacctcgtg cggcacctcg
    10381 aagctcgcgt ccgatgccgc cgccttggcg aacgccgcca aggtatcgac gtcgagcgcg
    10441 gcggcgtgga tttcgccgtc gagcaccgcc ggacgggtgc cggtggtcca gctataggcg
    10501 agccgcccgg tgacgttctc ctgatcgagt gtcgccgtca tccgctcgag cgcgaaccgg
    10561 tcacgcccga tggtgaccac gccgcgcgcg ctgagcgtct gcgccgcgct cggggccgga
    10621 ttgccgcggc cttcgagccg cgccaccagc accttcagat catgcgtctc gaggctcgcg
    10681 ggtccgctga aggttagtcc cttgggcgaa tcatcgaggc gcccgctcag cttcacctcg
    10741 gtcgcgcccg gggcgcgcag ctcgaggccg tcgagattcc agcccttgcc gtcgaagccg
    10801 atattgccgt gcaccgattc gagcaggctc ccgccgagcg tcatcgcatc gagggcaacc
    10861 gcgatcttcg tcggtatcgg cggtttcgcc gccgccgcga agaacgcctc gacggcgctt
    10921 ctgatcagga cgaagggggg ccgcagcggc gcatccgggg tagccaaggc gcgatccagg
    10981 tccacctgct tcgccgagat ggcgccgtcg agatgcggat gctcgccgag cgtgagctcc
    11041 gcgctgccgt tgagattgat cgcggcctcc tcgggcccga actggaacgc cagttcctgc
    11101 agggacgccg aagcggatgc catgcgcagt ttgccggcga ggtgccagac atcggtggtc
    11161 acccgctcgc cgcgcgccag cgcggcggtg accggccgcg ccgccagcgt cccgtcgaat
    11221 tgcggcgcgc catgatcgag gttcagcgtg ccctcgatct ccgtcgtcaa ctgatagcct
    11281 gccgggtcga cgccgacttt gagcctgagc gcgccgccgt cctcgggccg cgtcgccgcg
    11341 atgcgatagc cgtagacttg atcgccgctg cggaaggcgc cttcgccctt gaacggcccg
    11401 ccgaacgagc ggacgtcgcc cttgaacgcc agctccttca gcaccagccg gaagccggag
    11461 gccgcgtcgg tcaggacggc ctgcccgtca tcgatcgtca gatgcgagat ggtgagccga
    11521 tcgggactga gcgacggtga gatcgacggc caatcgaccg cgccgttgcg gtcgagaccg
    11581 aggttgatct tcggcgcaac gagatggagc tccgtcgcct ccacctcgcc gcggagcagc
    11641 ggaccgaggc tgacttcaag ctcgagggtc gcggcctgta tttgcggctt ctggccggcc
    11701 gcgccgaccg cgacgtcagc gagcttgatc cgcggggtcg gcaggatgcg ggcctcgatc
    11761 gtgccgttca cgcggacggc gagcccggtg aggcggctcg cctcctgctc gaagcgcgga
    11821 cggtaccggt tccaatcgat cacaagcggc gcggccagcg ccgagaccag cgccaggatg
    11881 atagcgattc ccaatccgag cagcgtcgtc tgcacggcgc ctccgagcct ttccgtggtc
    11941 ggctgtacga aacccgcgca cccgctccgc gaagcctaga tcaggccacc gcggattgca
    12001 cgttcaagct gccgttgccc accggccggc aaacagtgcg ggccaccacc tcaccgcgcc
    12061 tcaagcgttc cttgtttgcg gcgttcaggg cgattctgtg tcgcttgcga cctcttgatc
    12121 agaggttaac caccttgccg gggttcatga tgtccagcgg gtccagggcg cgcttgatcg
    12181 cgcgcatggc agccagggct ccttcgccat gctcggcctg catgtacttc atcttgccct
    12241 gcccgatgcc gtgctcgccg gtgcaggttc catccatcgc caaagcgcgc tcgaccaggc
    12301 gttcgaggaa agcctcgacc cgcgcgacct cctcgcggtc gtcgaggtcg accatcagcc
    12361 cgacgtgaaa attgccgtcg ccgacatggc ccacgatcgg ggcgacaaga ttgt
//
LOCUS       DATMQB010000118        14688 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2823077, whole genome shotgun sequence.
ACCESSION   DATMQB010000118 DATMQB010000000
VERSION     DATMQB010000118.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 14688)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14688)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14688
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2823077"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..344
                     /locus_tag="VNY79_03775"
     CDS             <1..344
                     /locus_tag="VNY79_03775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HWX71598.1"
                     /translation="HVTRLSPLDPFGHLVKFAFALAHLQSARYQQAIEWADRALIQKP
                     GFTNAMIVRTAACGHLERRDEAREWVGRIREIAPQLTVSSIRDFLSGFFVPEALAYQV
                     DGLAKAGLPRD"
     gene            complement(608..1003)
                     /locus_tag="VNY79_03780"
     CDS             complement(608..1003)
                     /locus_tag="VNY79_03780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71599.1"
                     /translation="MDLHADSVAGGHVGGRRRTDLVARELPPKRLALEGRYRLTGPET
                     QLGVKTERAIVVAGLQQAYAGFLLPRRTIKNVLHQAQPEAAVLCCRINGDRSDAGNAR
                     SLVEEITADDLPLVLGDDRVEARMGQRHG"
     gene            1143..1325
                     /locus_tag="VNY79_03785"
     CDS             1143..1325
                     /locus_tag="VNY79_03785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71600.1"
                     /translation="MALIAAAPEFGGPGFLLPTRNHEVLKWSLEAGLKLVFQMTLMTI
                     GLYNEPTAAYMPSIHY"
     gene            1678..2403
                     /locus_tag="VNY79_03790"
     CDS             1678..2403
                     /locus_tag="VNY79_03790"
                     /inference="COORDINATES: protein motif:HMM:NF012920.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LexA family transcriptional regulator"
                     /protein_id="HWX71601.1"
                     /translation="MTGLYHARQARGMSRSELVRLSGVSKQQLSRLENGLIRLRLDHL
                     KPFAGPLGYTPEQILLWGRYPGTGGVAGSHVESSDVLREEAAQEDFGPAPGQVPELDT
                     RAGLGGGGLPAREVRKEGRYADPLKAEGWLFPASFVREQLHASAARLLVLDTTGDSMA
                     PTIMSGERVIVDTGHKTPTPDGLYAIRDTFQCIVVKRLQVLRSSRPTRVRVISDNPNH
                     PSEEAPLGEVEIVGKVLCCLKLF"
     gene            2663..3040
                     /locus_tag="VNY79_03795"
     CDS             2663..3040
                     /locus_tag="VNY79_03795"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71602.1"
                     /translation="MAIALAQIGAAFDAAAVASAFKIRVEHLLRLGQQHPAVRARFGA
                     RAEMLAGRGLDAAIVVTERWWRDERRAFQIASVFGCAPRLSLEVLRELRLILRWMRLK
                     RMAAQYSAIIEALGEARAARAAE"
     gene            complement(3067..4944)
                     /gene="aspS"
                     /locus_tag="VNY79_03800"
     CDS             complement(3067..4944)
                     /gene="aspS"
                     /locus_tag="VNY79_03800"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HWX71603.1"
                     /translation="MHRYRSHTCGALRAGDIGSEVRLSAWCHRIRDHGGVLFIDLRDH
                     YGITQVVADPDSPAFKTAETLRAEWVVRVDGKVRPRPDGTENPDLPTGAVEVYAREIE
                     VLGRAGELPLPVFGDQEYPEDIRLKYRFLDLRRERLHRNIMKRGDIIDSLRRRMKEQG
                     FFEFQTPILTASSPEGARDYLVPARLHPGKFYALPQAPQQFKQLIMISGFDRYFQIAP
                     CFRDEDARADRSPGEFYQLDIEMSFVTQEDVFAAVEPVLRGVFEEFGGGKPVTPKFPR
                     IPYGEAMTKYGTDKPDLRNPIVMQDVSDHFRGGGFTVFARILETRPKSAVWAIPAQKG
                     GSRAFCDRVNSWAQGEGQPGLAYIFWVKEMLVGSPDAQLFAKLPQDKREEYFDEHAVI
                     VGRGPVANNLGRQRTEKLRQELGLKDGDAVFFIAGELANLKFAGLARTKVAEELGVVQ
                     KDRFELCWIVDFPMYEWNDEDKKYDFSHNPFSMPNAPIEEFMSLKQIDHEEILALKAI
                     QYDIVCNGVELSSGAIRNHRPDVMKKAFAIAGYDESVLEQKFGGMLHALSLGAPPHGG
                     IAPGVDRIVMLLCGEENLREVVLFPMNQRAEDLMMGAPSEASPKQLRELHIRVVPPGP
                     S"
     gene            5102..6733
                     /locus_tag="VNY79_03805"
     CDS             5102..6733
                     /locus_tag="VNY79_03805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HWX71604.1"
                     /translation="MTTAEAALGALLAHGLDTIYALPGVHNDDFFDALAKAALPKSPA
                     DIRVVHTRHEQGAAYMALGAALATGKPQVYCVVPGPGLLNSSAALLTAYGMNAPVLAL
                     IGQIPQDAIGRSLAHLHEIRDQAGILARLVDWSARIAAPHEAPRLVAEAMRSMFAGRP
                     GPAALECAIDVWGRAAPVSAQAPLPIPEPPIDEDAVQAAAQRLGAAKRPLIVAGGGAQ
                     EASAEVTRLAHDLQAPVVSYRRGRGVVSDRDPLSVNLPLGRELWAEADVVLAVGTHLH
                     SPLQQWGIDNDLAIVRVDADPEEPARFAKPAVALIGQTQPILQRLLDVLPAQNAQRPS
                     RSAELKERQARMRARLAKLEPQLSYLAAIRAELPEDGIFVDEVTQVGFVSRLAFPVYR
                     PRTFLSPGYQDNLGWGFATALGAQHARRDVPVLSITGDGGFLFTASEMATALRHRIPL
                     VTVLFNDGAFGNVRRIQEEKYGNRLIASDLVNPDFVAFAESFGAKAMRVKTPEQLRAA
                     LRRGFANRDGPTLIEVPVGAMPSPWEFILMGRVRG"
     gene            6925..8097
                     /gene="rnd"
                     /locus_tag="VNY79_03810"
     CDS             6925..8097
                     /gene="rnd"
                     /locus_tag="VNY79_03810"
                     /EC_number="3.1.13.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016891 - RNA endonuclease activity,
                     producing 5'-phosphomonoesters [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HWX71605.1"
                     /translation="MHPITTTTELAAACRRMATHPFVTIDTEFLRETTYYPLLCVAQM
                     ASPEEAVVIDALAPEIDLAPFFALMGDEKVMKVFHAARQDIEIVWHSAELIPRPIFDT
                     QVAAMVLGYGDSISYEQLVQRVTGDSLDKSHRFTDWTRRPLSDAQLAYAISDVTHLRD
                     VYQALVDDLGRRGRVDWVQEEMGVLTSADTYRMDPENAWLRLKTRVRKPKELAVLIEV
                     AAWREREAQSRDVPRSRVLKDDVIGDIAVQAPTSIDKLKHLRSLPKGFERSRWGEAIV
                     EAVERGLARDVRTLPRPRAQNSANGTAAVELLKVLLRMVSERHHVAPKVIATVDDLER
                     IAADDHAKVPALSGWRRELFGEKAIALKHGKLALAIEKGKVAAVEREMPGSVTPSA"
     gene            complement(8081..9601)
                     /gene="ppx"
                     /locus_tag="VNY79_03815"
     CDS             complement(8081..9601)
                     /gene="ppx"
                     /locus_tag="VNY79_03815"
                     /EC_number="3.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004309 - exopolyphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006798 - polyphosphate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exopolyphosphatase"
                     /protein_id="HWX71606.1"
                     /translation="MSRDPIVAHGRLDHGPPVGVIDIGSNSVRVVVYEGLTRSPTSLF
                     NEKALCGLGREVQSTGLLAVEAVEQALSALKRYRALCDTMGVKKVIAIATAACRDAKN
                     GRGFIKLAERTIGTEIDVLSGAREAELTALGVVSGVHLPDGVVGDLGGGSLELIDVHG
                     RRVRHGLTRPLGGLALADISAKSLKKAEKYVKRTLGGLPVLRRCEDRSFYAVGGTWRA
                     LARLHMWQTGYPLHVMHGYAIAADEALEFARLLHRVDVETLSKIEVVASARRPLLSYA
                     ALVLEHILRIGRPRQVVFSALGVREGLLYSLLKQKDKEKDALIEAARGLNQLRSRSPR
                     HGEELIEWSDRFMASSGLDETADERRLRHAACLLADIGWRAHPDYRGEQSLNIIAHGG
                     FTAIDHPGRAYLALAVFYRHVGLVMDDALSPRLRELASTRMLDRARVLGAALRLAYVV
                     SAAMPGVLPQTRLAVERHRLALHLPGRFAALAGERVLTRLRSLARLIGREPVMLMG"
     gene            complement(9662..11899)
                     /locus_tag="VNY79_03820"
     CDS             complement(9662..11899)
                     /locus_tag="VNY79_03820"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009358 - polyphosphate kinase complex
                     [Evidence IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006799 - polyphosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA degradosome polyphosphate kinase"
                     /protein_id="HWX71607.1"
                     /translation="MVDRAQATVVALESDPERRLEAPPRLAEPAGRHAEAPISTSPER
                     FINRELSWLNFNRRVLEESANRGHPPLERLRFLSISANNLDEFFMVRVAGLRAQVRAG
                     ISTKSPDGLTPAEQLTRIAEAVVLLVEDQQAQWLELRAGLAQAGIALVDGPEVGKAEK
                     AWLEDYFLAHVFPLLTPLAVDPAHPFPFIPNLGFSIALQLARAKDGKAMNALIRMPNR
                     IERFVRLPQAGEGGAVRLISIEGATSLFIGKLFPGYKVNGVGAFRVIRDSELEILEEA
                     EDLVRLFETALKRRRRGSVIRLDIEALMPPELQRFVQRALGATDDSVFKVDGVLALNE
                     MAQIASLDRPDLEFVPYTPRYPGRIRDHGGDCFAAIRQKDLIVHHPYESFDVVVDFLH
                     QATRDPDVVAIKQTLYRTSADSPIIRALAEAAEAGKSVTAVVELKARFDEEANIRWAR
                     DLERAGVQVVYGFIELKTHAKLSLVVRREGAALASYVHVGTGNYHPVTARIYTDLSFF
                     TADPNIARDVAHVFNYVTGYAEPAELERMAVSPLTLRQCIHEHIEEEIAHAKAGRPAA
                     VWMKMNSLVDPDIIDALYRASSAGVAIELVVRGICCLRPGVPGLSENIRVKSIVGRFL
                     EHGRIFCFGSGHPLPHPKAALYISSADLMPRNLDRRVEVICPILNPTVHEQVLDQIMV
                     ANLKDNEQSWQFLADGSSLRIKPAAGEEVFNAHTYFMTNPSLSGRGKSPKESIPRLRH
                     KSQRV"
     gene            complement(12045..12713)
                     /locus_tag="VNY79_03825"
     CDS             complement(12045..12713)
                     /locus_tag="VNY79_03825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaA/Hda family protein"
                     /protein_id="HWX71608.1"
                     /translation="MSLRPRQLALALDHAESYARDDFLAGPGNEAALRLIESWPDWPA
                     NAIALIGPEGSGKSHLATIWAGAAGARVISGRALGAAELPHSLATGALVVEDAATARD
                     ERALFHLLNLAREESASLLLTARAAPATWPVAIPDLASRLRAVPVATLHAPDDAMLRA
                     VIVKLAADRQLVLDESVVGYVAARIERSFAAARTAVITLDNEALRQRRPATRALAAEL
                     FREG"
     gene            complement(13281..13655)
                     /locus_tag="VNY79_03830"
     CDS             complement(13281..13655)
                     /locus_tag="VNY79_03830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal transduction histidine kinase"
                     /protein_id="HWX71609.1"
                     /translation="MPLTGLAVDEGPHSMDGLLLHGWEGPARVEAFISRRVIDSWVDP
                     REPHGGRRSLLRAQYNALGKFNLAAIERIVASKYQRGREFNRQHPFVDILLSDIVESE
                     EVLDVSELVREPPPATFQRMSR"
     gene            complement(13646..14188)
                     /locus_tag="VNY79_03835"
     CDS             complement(13646..14188)
                     /locus_tag="VNY79_03835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020607913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71610.1"
                     /translation="MFTSKQYRAKATEYGDLAETSAGSNQRRDFQKLERRFAALAHNE
                     QVLAENYQSNVSSAEQGQSQGVTLADEEEHVLRCLGAALIMQWNALPTKLQRELFDNA
                     GSMGELMETAALRGQIARLLHRYKNDDNPTAAIGTDAADGDASLHAASMARWDDEGGA
                     CQMPEQRGMEKRLGEDSSCR"
     gene            14451..>14688
                     /locus_tag="VNY79_03840"
     CDS             14451..>14688
                     /locus_tag="VNY79_03840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71611.1"
                     /translation="MTIPIPASKAVSRHSNRRAASCETRVWRGYAATKAQLAAALVRE
                     QELLREKSELLQRQEMLAEEFEHRLVNGLQIVASL"
BASE COUNT         2562 a         4834 c         4756 g         2536 t
ORIGIN      
        1 agcacgtgac gcgcctgagc ccgctcgatc cgttcggtca tctggtcaag tttgccttcg
       61 ccctcgcgca cctgcagtcc gcacgctacc aacaggccat cgaatgggcc gaccgggcgc
      121 tgatccagaa accgggcttc acgaatgcga tgattgtacg gacggcggct tgcggtcatc
      181 tcgagcggcg cgacgaagcg cgcgagtggg ttggccgcat ccgtgagata gcgccacagc
      241 tgacggtaag cagcatcagg gacttccttt caggtttctt cgtccccgag gcgctggcct
      301 accaagtcga tggcctcgcc aaggccggcc ttccccgcga ttaaaaccgc cgagcttaat
      361 tttgcttcaa ggataaaccc gcctcgcatc caaggtgcgc cttccttgtg gtcgtcgatc
      421 gcagtaggga tgttcgtacg atcgctttgc gaatcagagg caacaagcga tgagcatcgt
      481 tcttcgttcg ggtaccgccg ccgacgccgc ggcgtgcggt gctgtctgct atgaagcctt
      541 caaggcgatc ggcacggccc ataacttccc gccggacttt ccctccccgc aagtggcgag
      601 cgaaatccta tccatgccgc tgacccatcc gggcttctac tcggtcgtcg ccgaggacca
      661 agggcaaatc gtcggcagta atttcctcga cgagcgatct tgcattgccg gcgtcggacc
      721 gatcaccgtt gatccgacaa cacagaaccg cggcctcggg ttgagcctga tgcaggacgt
      781 tcttgatcgt gcggcgcggc agcagaaagc cggcgtacgc ctgctgcagg ccggctacca
      841 caatcgctcg ctctgtcttt acaccaagct gggtttctgg acccgtgagc cgatatcgac
      901 cctccagggc aagccgcttg ggcggaagtt cgcgggctac gaggtccgtc cggcgacggc
      961 cgccgacgtg gccgcctgca accgagtctg cgtgcaggtc catggatttg attgtggggg
     1021 cgaattgcgc gacgcgatcg acagaaggga gcgtcggtcg tggaacatct tgggcgcatt
     1081 accggctaca cgaccaggat cgccttttcg gccacagcgt cgcggagacc aaccgcgact
     1141 tgatggcgct gatcgccgcg gcgcccgagt tcggcgggcc cggcttcctg ctgccgacgc
     1201 gcaatcacga ggttctcaaa tggtccctcg aggcggggct gaaactcgtc tttcagatga
     1261 cgctgatgac catcggtctc tacaacgagc cgaccgcggc ctatatgccg tccattcatt
     1321 actgagacac ttgtccgcgc ggcttggcac ggcactttca ctgaaagtgt gagagaatcc
     1381 atcctacggc ccacttcacc gcgccctcga cgatccaacc gaagacgacg acgccggcga
     1441 agccgatcga ggcccatgcc tggctttgca tgcctgcccc ttctccgctg agtttccgtg
     1501 tcctgccgcg accgtggtgt gcgctctgcc ggtcagccgc gggcgtcatc gtcgtcactg
     1561 tttgtgatac atagtcccac aatatgcgac ggtcaagtca ctgatttgga agctaggcgg
     1621 gcagaaccga attggtgaca atcctgcatg gctcggcgga cacgaccggc gcggcagatg
     1681 accggcctct atcacgcgcg gcaggcgcgc ggcatgtcgc gttccgagct ggtgcggctg
     1741 tccggggttt ccaagcagca actgtcgcgg ctggagaacg gcctgatcag actgcggctc
     1801 gaccacctga agccgttcgc cgggccgctg ggctacacgc cggagcagat cctgctgtgg
     1861 gggcgatatc cgggcaccgg cggcgtcgcc ggcagccatg tcgaatcgag cgacgtgctg
     1921 cgcgaggaag ccgcgcagga ggatttcggt cccgctcccg gccaggtgcc ggagctcgac
     1981 acgcgcgccg gtctcggcgg cggcggcctg ccggcccggg aagtgcgcaa ggagggacgc
     2041 tacgccgacc cgctaaaggc cgaaggatgg ctgtttcccg cgagtttcgt gcgcgagcag
     2101 ctgcacgcct ccgccgcgcg gctcctggtg ctcgacacca ccggcgacag catggcgcca
     2161 accatcatgt ccggcgagcg cgtgatcgtc gacaccgggc acaagacccc tacgcccgac
     2221 gggctctacg ccattcgcga cacgttccag tgcatcgtgg tcaagcgcct gcaggtgctg
     2281 cgctcgtcac gcccgacccg cgtcagggtg atctccgaca atccgaatca tccgagcgaa
     2341 gaggccccgc tcggcgaagt cgagatcgtc ggcaaggtgc tgtgctgcct aaaactgttt
     2401 tgacgccggc gcccgcgtcc atcggacaca aacgataagc ctcgtcggca ccggcgattt
     2461 ccgccgccgc aacgggccac gcccgctcgg cggccgagag gacgtcacta tttccgcaac
     2521 gatcgcttga ccttcgtcac agtatcggtt acaccagttg ccgaaaccga gccgctgcga
     2581 tggcctttct cgaacaccgg ccgaatgcgc cgagcgcgtt cgccgcaccg ccgcagaggt
     2641 tcccgcagaa cagcgatcgg ccatggcaat cgcgctggcg cagatcggcg ccgccttcga
     2701 cgcagcggcc gtcgccagcg cgttcaagat cagggtcgag cacctgcttc ggctgggcca
     2761 gcagcatccc gccgtgcgcg cccgtttcgg ggcgcgcgcg gaaatgcttg ccggccgcgg
     2821 cctcgacgca gcgattgtcg tcaccgagcg ctggtggcgc gatgagcgca gggcgttcca
     2881 gatcgcgagc gtcttcggct gcgcgccgcg gctttcgctg gaggtcttgc gcgagcttcg
     2941 tctaattctg cgctggatgc gcctcaagcg catggcggct cagtattccg ccatcatcga
     3001 agcgttgggc gaggcgcggg ccgcgcgggc agcggaatga ccgtgacgga acgagccagt
     3061 gcccgcttac gacgggcccg gggggacgac gcggatatgg agctcgcgca actgcttcgg
     3121 cgaggcctcc gacggcgcgc ccatcatcaa atcttccgcg cgctggttca tcgggaacag
     3181 cacgacctcg cgcaggttct cttccccgca cagcagcatg acgatgcggt ccacgcccgg
     3241 cgcgatgccg ccgtgcggcg gcgccccgag cgagagcgcg tgcagcatgc cgccgaattt
     3301 ctgctccagc acgctttcgt catagccggc gatggcgaaa gccttcttca ttacgtccgg
     3361 ccgatggttg cggatcgcgc cggaggaaag ctccacgccg ttgcagacaa tgtcgtattg
     3421 gatggccttc agtgcgagaa tctcttcgtg atcaatttgc ttgagcgaca tgaattcttc
     3481 aatcggcgca ttgggcatcg agaacgggtt gtgggagaag tcgtactttt tgtcctcgtc
     3541 gttccattcg tacatcggga agtcgacgat ccaacacagc tcgaagcggt ccttctggac
     3601 aacgccgagt tcttcggcca ccttggtgcg agctaggccg gcgaatttca aattcgcgag
     3661 ctcgccagcg atgaagaaca ccgcgtcacc atccttcaga ccgagttcct gacgcaactt
     3721 ttcggtgcgc tgtcgcccta gattattcgc gacgggacca cgcccgacaa tcacagcatg
     3781 ttcgtcgaaa tattcctccc gtttatcctg tggaagtttc gcgaacagct gcgcatccgg
     3841 ggaaccgacc agcatctctt ttacccagaa gatgtacgca agccccggct gcccctcgcc
     3901 ttgcgcccac gaattcacgc ggtcgcagaa cgcgcgcgag ccgcccttct gcgcaggaat
     3961 ggcccacacc gctgacttcg gtctcgtttc caggatgcgg gcaaatactg tgaatccacc
     4021 ccctcgaaaa tgatcagaca catcctgcat gacaatcgga ttgcgcaggt ccggcttgtc
     4081 ggtcccgtat tttgtcatcg cctcaccgta agggatgcgc ggaaacttcg gcgtcaccgg
     4141 cttgccgccg ccgaactcct cgaacacgcc gcgcagcacc ggttcgaccg cggcgaacac
     4201 atcctcctgc gtgacgaagc tcatctcgat gtcgagctgg tagaactcgc cgggcgagcg
     4261 gtcggcgcgc gcgtcctcgt cgcgaaagca cggcgcaatc tggaagtagc ggtcgaagcc
     4321 ggagatcatg atcagctgct tgaactgctg tggcgcctgc ggcagggcgt agaacttccc
     4381 gggatgcagg cgcgccggca cgagatagtc gcgcgccccc tcgggcgacg aggcggtgag
     4441 gatcggcgtc tggaattcga agaagccctg ctccttcatc cgccgccgca gcgaatcgat
     4501 gatgtcgccg cgcttcatga tattgcggtg gaggcgctcg cggcgcaggt cgaggaaacg
     4561 gtatttgagc ctgatgtcct cgggatattc ctgatcgccg aagaccggca gcggcagttc
     4621 gccggcccgt cccaaaactt cgatctcgcg ggcgtagacc tcgaccgccc cggtcggcag
     4681 atcggggttc tcggtgccgt cgggccgcgg gcgtaccttg ccgtcgacgc gcaccaccca
     4741 ttccgcacgc agcgtttcgg cggtcttgaa cgccggactg tcgggatctg cgaccacttg
     4801 ggtgatgccg tagtggtctc gcaggtcgat gaacagcacg ccgccgtggt cgcggatgcg
     4861 gtgacaccaa gcagagagcc gcacctcgct gccgatgtcg ccggcgcgga gagcgccgca
     4921 cgtatggctg cgatagcggt gcattctcgc ccgtgtttct ctgtttgcgg tcttcggccg
     4981 gaacgcggaa agcgcatgcg gggatgcctt tgtcaaggcg agccggcgca tgatccgcta
     5041 gagtggcgcc atggcacgaa aacggcgaag cgcgaagggc gacacccgag cggcgacgcg
     5101 catgaccacg gccgaagcgg cgctcggcgc ccttttggcc catggcctcg atacgatcta
     5161 tgcgctgcct ggcgtgcaca acgacgactt cttcgacgcg ctcgccaaag cggcgctgcc
     5221 gaaaagcccc gcggacatcc gcgtggtcca cacccgccac gagcaaggcg ccgcctacat
     5281 ggcgctcggc gcggcgttgg cgacgggaaa gccccaggtg tattgcgtgg tgccggggcc
     5341 gggactgctc aactcgtcgg cggctctgct caccgcatac gggatgaatg ccccggtgct
     5401 ggcgctgatc ggacaaattc cgcaggacgc catcggccgc tcgcttgcgc atcttcacga
     5461 gatccgcgac caggccggca tcctggcgcg gctcgtggac tggtcggcgc ggatcgcggc
     5521 accgcatgag gcgccgcgcc tcgtggccga ggcgatgcgc tccatgttcg cgggccggcc
     5581 cggcccggcg gcgctcgaat gcgccatcga tgtctggggg cgcgccgcgc cggtcagcgc
     5641 ccaggcgccg ctcccgattc ccgagccacc cattgacgaa gacgccgtgc aagctgccgc
     5701 acagcgcctc ggcgccgcca agaggccgct gatcgtcgcc ggcggcggcg cccaggaggc
     5761 ctcggccgag gtgacgcggc tcgctcatga cctgcaggcg ccggtcgttt cctaccggcg
     5821 cggccgcggc gtcgtcagcg atcgcgatcc gctgtccgtg aacctgccgc tcggccgcga
     5881 attgtgggcc gaggccgacg tcgtgctcgc cgtcggcacg cacctgcatt cgccgcttca
     5941 gcaatggggg atcgacaacg atctcgcgat cgtacgcgtc gacgccgatc cggaagagcc
     6001 cgcgcgcttt gccaagcccg cggtcgcgct gatcggacaa acgcaaccca tattgcagcg
     6061 cctcctcgac gtactgccgg cgcagaatgc gcagcggccc tcgcgcagcg cggagttgaa
     6121 ggagcgccag gcccgcatgc gcgcacgcct cgccaagctt gagccgcagc tttcctacct
     6181 cgccgcgatc cgcgccgaat tgcccgagga cggcatcttc gtcgatgagg tgacgcaggt
     6241 cggattcgtc tcgcgcctcg cctttccggt ctaccggccg cgcacatttc tctcgccggg
     6301 ctatcaggac aatctgggct ggggctttgc caccgcgctc ggcgcgcagc acgcgcgccg
     6361 cgacgtgccg gtgctgtcga ttaccgggga cggcggcttt ctgttcacgg cgagcgagat
     6421 ggccacggcc ctgcgccatc gcattccgct ggtgacggtg ctgttcaacg acggcgcctt
     6481 cggcaacgtc cgccgcatcc aggaggagaa gtacggcaat cgcctgatcg ccagcgacct
     6541 cgtcaatccg gacttcgtcg ccttcgctga aagcttcggc gccaaggcga tgcgggtgaa
     6601 gaccccggag caactccggg cggcgctgcg gcgcggcttc gccaaccgtg acggtccgac
     6661 cctgatcgaa gtccccgtcg gcgccatgcc gagcccctgg gagttcatcc tcatggggag
     6721 ggtgcgcggc taggaatcgt gcgctacgct caaggggcag caggtcgcgc gaatcatgcc
     6781 gacacgaatc atgccgaaag gacagagacc gctccaatgc aagtgcgatc ttccaacaaa
     6841 ccgcaggctg cgtgattgcc gcgattcggc atcctgaaaa cgcgcgtggc gacaacggcc
     6901 ccctattccg ctatcacact ctcaatgcac ccgatcacga caacgaccga acttgccgcc
     6961 gcgtgccggc ggatggcaac ccaccccttc gtcaccatcg acaccgagtt cctgcgcgag
     7021 accacctact atccgctgct gtgcgtggcg cagatggctt cgcccgagga agctgtcgtg
     7081 atcgacgcgc tcgcccccga gatcgacctc gcgccgtttt ttgcgctgat gggcgacgag
     7141 aaggtgatga aggttttcca cgccgcgcgc caggacatcg agatcgtctg gcacagcgcg
     7201 gagctcattc cccgcccgat cttcgatacc caggtcgcgg ccatggtgct cggctacggc
     7261 gattccatct cctatgagca gctggtgcag cgcgtcaccg gggactcgct cgacaagtcg
     7321 catcgcttca ccgactggac gcgccgtccg ctctccgacg cgcagctcgc ctacgcgatt
     7381 tccgacgtca cccacctgcg cgacgtctat caggcgctcg tcgacgatct cggccggcgc
     7441 ggccgcgtcg actgggtgca ggaggaaatg ggcgtgctga cctcggccga cacctaccgc
     7501 atggatccgg agaacgcctg gctgcgtttg aagacgcgcg tgcgcaagcc caaggagctc
     7561 gccgtgctga tcgaggtcgc ggcctggcgc gagcgcgagg cgcagtcgcg cgacgtgccg
     7621 cgttcgcgcg tgctcaagga tgacgtgatc ggcgacatcg ccgtgcaggc gccgacctca
     7681 atcgataagc tcaagcacct gcgctcgctg cccaagggtt ttgagcgctc gcgctggggt
     7741 gaggcgatcg tcgaggccgt ggagcgggga ttggcgcgtg acgtgcgaac cttgccgcgg
     7801 ccgcgcgcac agaactcggc taacggcacg gcggcggtcg agctgctcaa ggtgctgctg
     7861 cggatggtct cggagcgcca tcacgtcgct cccaaggtga tcgccaccgt cgatgacctg
     7921 gagcgcattg ccgccgacga tcacgccaag gtgccggcgc tctccgggtg gcgccgcgag
     7981 ctgttcggcg agaaggcgat cgcgctcaag cacggcaagc tcgccctcgc tatcgagaag
     8041 ggcaaagtcg cggcggtcga gcgcgaaatg ccgggttccg tcaccccatc agcatgaccg
     8101 gctcgcgccc gatgaggcgc gcaagcgagc gcaggcgggt caagacccgc tccccggcca
     8161 atgccgcaaa gcggccggga aggtgcagag cgaggcggtg gcgctcgacc gccagccgcg
     8221 tctgcggcag cacgccgggc atggccgccg acacgacata agcgagccgc agcgccgcgc
     8281 cgagcacgcg cgcgcggtcg agcatgcgcg tcgaagcaag ttcgcgcagc cgcggcgaca
     8341 gcgcgtcgtc catgaccagc ccgacgtggc gatagaacac ggcaagcgcc agataggcgc
     8401 ggccgggatg atcgatcgcg gtgaagccgc cgtgggcgat gatgttgagc gattgctcgc
     8461 cgcggtagtc gggatgcgcc cgccaaccga tgtcggcgag caggcacgcg gcatgacgca
     8521 gacggcgttc gtcggcggtc tcatcgaggc ccgaggaagc catgaaacgg tcggaccatt
     8581 cgatcagctc ttcgccgtgg cgcggcgagc gcgagcgcag ctgattgaga ccgcgcgcgg
     8641 cctcgatgag tgcgtccttc tccttgtcct tctgcttgag cagcgaatag agcagccctt
     8701 cgcgtacccc gagcgcggaa aataccactt ggcgcggtct gccgatgcgc aaaatatgtt
     8761 cgagcaccag cgccgcgtac gagagcaatg gccgccgcgc gctggcgacc acttcgatct
     8821 tggaaagcgt ctcgacgtcg acgcgatgca gcaggcgggc gaattccagc gcctcgtcgg
     8881 cggcaatggc gtagccgtgc atcacgtgca gcggatagcc ggtctgccac atgtgcagcc
     8941 gcgccagcgc ccgccaggtg ccgccgacgg cgtagaagct gcggtcctcg caacgcctga
     9001 gcaccggcag gccgccaagc gtccgcttga cgtatttttc cgccttcttc agcgattttg
     9061 ccgagatgtc tgccaaggca aggccgccga gcggccgggt caggccgtgc cgcacgcgcc
     9121 tgccgtggac gtcgataagc tcgagcgagc cgccgccgag gtcgccgacc acgccgtcgg
     9181 gcaggtgcac gccggagacg acgccgagcg cggtcaattc cgcctcgcgc gcgccggaga
     9241 gcacgtcgat ctccgtcccg atcgtgcgct cggcgagctt gatgaagccg cgcccgttct
     9301 tggcgtcacg gcaggcggca gtcgcgatgg cgatcacctt cttcacgccc atcgtgtcgc
     9361 agagcgcgcg gtaacgcttg agggcggaga gcgcctgctc cacggcctcg accgcgagca
     9421 atccggtcga ttgcacttcg cggccgagtc cgcacagcgc cttctcattg aacagggagg
     9481 tcgggctgcg tgtgagcccc tcgtagacaa caacgcgcac cgaattcgag ccgatgtcga
     9541 tgacgccgac cgggggaccg tggtcgaggc gtccgtgtgc gacgatcggg tctcggctca
     9601 tcgtctgcgg tcagtttttg tttgcaatcg ctaccgggcg gcactcgcct cttcgcgccg
     9661 ctcacacccg ctgagacttg tggcgcagcc ggggaatgga ttcctttggc gactttccgc
     9721 gccctgacag gcttggattg gtcatgaagt aggtgtgggc gttgaagacc tcttcaccgg
     9781 ccgccggttt gatgcgcaag gaggaaccgt cggcgaggaa ctgccagctc tgctcgttgt
     9841 ccttcaggtt cgccaccatg atctgatcga gcacctgctc gtgaacggtc gggttgagga
     9901 ttggacagat gacctcgacg cggcggtcga gattgcgcgg catcaaatcg gcggaggaaa
     9961 tgtaaagcgc agccttgggg tgcggcagag ggtgaccgga gccgaaacaa aagatgcggc
    10021 cgtgttcgag gaagcggccg acaatggatt tgacgcggat attttcggag aggccgggga
    10081 cacccggccg caggcagcag atgccgcgca ccacaagctc gatcgcaacg cccgcgctcg
    10141 acgcccggta gagcgcgtcg atgatgtcgg gatcgaccag cgaattcatt ttcatccaca
    10201 ccgccgctgg acggccggcc ttggcgtgcg cgatctcctc ttcgatatgc tcatggatgc
    10261 actggcgcag cgtcaacggc gacaccgcca tgcgctcgag ctcggccggt tccgcatagc
    10321 cggtcacgta gttgaacacg tgggcaacat cgcgggcgat gttcggatcg gcggtgaaga
    10381 acgacaggtc ggtgtagatg cgcgccgtca ccggatggta gttgccggta ccgacatgca
    10441 cgtaggaggc cagcgcagcg ccttcccggc ggacgaccag cgagagcttg gcatgggtct
    10501 tgagctcgat gaacccatag acgacctgca cgccggcgcg ttccaggtcg cgcgcccagc
    10561 ggatgttcgc ctcctcgtcg aagcgggcct tgagctccac taccgccgtg accgacttgc
    10621 cggcttcggc ggcttcggcg agcgcacgga tgatcggcga atcggccgag gtgcggtaga
    10681 gcgtctgctt gatcgccacc acgtccggat cgcgcgtcgc ctgatgcagg aagtcgacga
    10741 cgacgtcgaa ggactcgtag ggatggtgga cgatcaggtc cttctggcgg atggcggcga
    10801 agcagtcgcc gccatggtcg cggatgcggc cgggataacg cggcgtgtag ggcacgaatt
    10861 cgagatcggg ccgatcgagg ctcgcgatct gcgccatctc gttgagcgca agcacgccgt
    10921 cgaccttgaa cacgctgtcg tcggtggcgc cgagggcgcg ctgaacgaag cgctgcagtt
    10981 cgggcggcat caacgcctcg atgtcgagcc tgatcaccga cccgcggcgg cggcgcttga
    11041 gcgcggtctc gaacaaccgc accaggtcct ccgcctcttc gaggatttcc agctccgagt
    11101 cgcggatgac gcggaacgcg cccacgccat tcaccttgta gccggggaag agcttgccga
    11161 tgaacagact cgtcgcgccc tcgatcgaga tcagccgcac cgcgccaccc tccccggcct
    11221 gcggcaaccg cacgaaacgc tctatgcggt tcggcatgcg gatgagcgcg ttcatcgcct
    11281 tgccgtcctt ggcgcgtgca agctgcaggg cgatcgagaa gccgagattg ggaatgaacg
    11341 ggaagggatg cgccgggtcg acggcgagcg gcgtgagcag cggaaagacg tgggcgagaa
    11401 aataatcttc gagccaggcc ttctcggctt tgcccacttc ggggccatcg acgagcgcga
    11461 ttccggcttg tgccagtccc gcgcgcagct cgagccattg cgcctgctgg tcctcgacca
    11521 ggagcacgac cgcctcggca atgcgcgtaa gctgctcggc cggggtcaag ccatcggggc
    11581 tcttggtgct gatgccggcc cggacctgcg ccctgagacc ggcgacgcgc accatgaaaa
    11641 actcatcgag gttgttcgcc gagatcgaca ggaaccgcag ccgctccagc ggcgggtggc
    11701 cgcggttggc ggattcctcg agcacgcgcc ggttgaaatt gagccaggag agctcgcggt
    11761 taatgaagcg ttccggactc gtggagatag gggcctcggc gtggcgcccc gccggctcgg
    11821 cgaggcgcgg gggcgcctcc agccgccgct ccgggtcgga ttcgagcgca acgacagtcg
    11881 cttgggcgcg gtcgaccatg gttctccctg agccttcaac cttacgatcg ctgatcttcg
    11941 taacgattcg atggctgcgt gtcgggagat aaggcggcgc ccaatggtcc cgtcaagcct
    12001 cctgcggccg cggctcggcc agccgcgtgc gagcgaaccc cgctctaccc ctcacggaag
    12061 agttccgctg caagcgcgcg cgtcgccgga cgcctttgcc gcagcgcttc gttgtcgagc
    12121 gtaatcaccg cggtacgcgc ggccgcgaac gaacgctcga tgcgcgccgc gacatagccc
    12181 acgacgctct cgtcgagcac gagctggcgg tcggcggcga gcttgacgat caccgcccgc
    12241 agcatggcgt cgtcgggcgc gtgcagcgtc gccaccggca ccgcccgcag ccgcgacgca
    12301 agatcgggga tggcgaccgg ccaggtcgcc ggtgcggcgc gcgcggtgag cagcagcgac
    12361 gcgctctcct cgcgggcgag gttgaggagg tgaaacagcg cacgctcgtc tcgggccgtg
    12421 gcggcatcct cgacaacgag cgccccggtc gcgagcgaat gcggcaactc ggccgcgccg
    12481 agcgcacggc cggaaatgac gcgcgctccc gccgcccccg cccagatcgt cgcgagatgg
    12541 gattttccgg agccctccgg cccgatcagg gcgatagcgt tcgccggcca gtccggccag
    12601 ctctcgatca ggcggagcgc ggcttcgttg cccggtccgg cgagaaaatc atcgcgcgcg
    12661 tagctttcag cgtgatcaag cgcgagcgcg agctgacgcg ggcgaaggga catggcgcct
    12721 cgagcacgat cggaaaagga tgggcaccgc cttccggcgg caacatgctc cgctagagaa
    12781 aaccggatcg caacgattcg tgcaggccaa ggccatcaat gcgccgcccc gaacgagttc
    12841 atctgacgga cccatccgcg agatagaagg cgatcgagag cacggtcaag acggcgacca
    12901 gcggccttga tgccgcgcat gtcggatttg tcttcactga cgtgcaccag ggctgtcaat
    12961 acgggaaccg gggacttcgg tacgtcgccg atttcgtgca accctcgggg cctcggaaca
    13021 caaggcacaa cagcggatcg aaaaatgaat gcggcggccc ggttcgattg cctggcgtgg
    13081 tcgggccgcg accgaagcgt cggccgcccg ctctaacgac ccgatcggga agctggcgct
    13141 tgcatcggtc gcgcatcgtc cgggtcccgg tcgatctgag caagtgcgta gattagggcc
    13201 ggggccctac tttcagctcg ggcctccggc ctccgcgaaa aaatacgacg gccgctcgcg
    13261 cgaaacggat cgcgacgatc ctaacgggac atccgttgga aagtggcagg cggcggctcg
    13321 cgcaccagtt cgctaacgtc cagcacctct tcgctttcca cgatgtcgga cagcagaata
    13381 tccacgaacg gatgctggcg gttgaactcc cgaccgcgct ggtactttga ggcaacaatc
    13441 cgttcaatcg ccgcaagatt gaacttgccg agggcgttgt attgtgcccg gagcagactt
    13501 ctccggccac catggggctc tctcggatcg acccagctat caatcactcg cctgcttatg
    13561 aatgcctcca ctctcgcagg cccctcccag ccatgaagca gcaatccatc catgctgtga
    13621 ggcccttcat cgacggcaag tcctgtcagc ggcatgagga gtcctcccct agacgcttct
    13681 ccatccctcg ttgttcgggc atttggcaag cgcctccctc atcatcccac cgcgccatag
    13741 aagccgcgtg tagactcgca tcgccgtcag cagcgtctgt tccgatcgcc gccgttgggt
    13801 tgtcgtcatt cttatacctg tgcagaaggc gagcgatttg tcctctgagg gcggcagtct
    13861 ccatgagctc acccatgctc ccggcgttgt cgaagagctc tctttgcagc tttgtgggca
    13921 acgcattcca ctgcatgata agcgcggctc ctaggcatcg caggacgtgc tcctcttcgt
    13981 ctgcgagggt gacgccttgt gactggccct gttctgcact gctcacgttg ctttgataat
    14041 tctctgcgag cacttgctca ttgtgcgcga gcgccgcgaa tctgcgctca agcttttgaa
    14101 aatcgcggcg ctggtttgaa ccggccgatg tctcggccaa gtcgccatat tcggtcgcct
    14161 ttgcgcgata ttgcttggat gtgaacatga aggcgccctt ttcctaacaa ctccatcgat
    14221 ctggatcggc cttgatcgct attcgaagct atatctcaca tggggatgag aagctcgaat
    14281 agcgagccca ggggcaggct agttctcata ggtcgcatgc tgcacattgt tctcgacatc
    14341 gagccaaaaa gggcgcatag tcaaaatagt cggtgcgcgc tcgggcgcaa ccgcccccaa
    14401 tcaacaaagc tgatcttcgc tcccgcaaca agtggcttcg gtggagatcc atgactattc
    14461 cgatcccagc gtccaaagcc gtatctcggc actcgaaccg acgcgcggcg tcgtgcgaaa
    14521 cgcgcgtctg gaggggttat gcggcaacaa aggcgcaatt agcggccgcc ctcgtgcgcg
    14581 aacaggaatt gctgcgcgag aagagcgagc tgctgcaacg ccaagaaatg ttggcggagg
    14641 aattcgagca ccggctcgtc aacggtttgc aaatagttgc gagcctgc
//
LOCUS       DATMQB010000119         3410 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4063879, whole genome shotgun sequence.
ACCESSION   DATMQB010000119 DATMQB010000000
VERSION     DATMQB010000119.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3410)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3410)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3410
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4063879"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..178)
                     /locus_tag="VNY79_03845"
     CDS             complement(<1..178)
                     /locus_tag="VNY79_03845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX71612.1"
                     /translation="MRRLFPLCVAALLICSNGFAQAQISDDVVKIGVLTDLSGPSATA
                     DGPGSVTAAQMAVDD"
     gene            480..1232
                     /locus_tag="VNY79_03850"
     CDS             480..1232
                     /locus_tag="VNY79_03850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HWX71613.1"
                     /translation="MPRFAHDGVEIAFLDEGEGEPIVLVHGFASGKEVNWVFPGWVTT
                     LTRAGRRVIALDNRGHGESTKLYEPAAYHSSAMAEDVRALIDHLGLGRADVMGYSMGA
                     RITAFLALAHPERVRSAILGGLGYHLVEGVGLTETIAQALEAPSRADIADPTALVFRT
                     FAEQTKSDLRALAACMRGSRQTLSKAEVGRIAVPVLVAVGSNDRIAGSADALAALIPG
                     AEALVIPGRDHMLAVGDRVFKAAVLDFLAQRP"
     gene            1374..2189
                     /gene="cysE"
                     /locus_tag="VNY79_03855"
     CDS             1374..2189
                     /gene="cysE"
                     /locus_tag="VNY79_03855"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009001 - serine O-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006535 - cysteine biosynthetic process
                     from serine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HWX71614.1"
                     /translation="MAQYQAKPVLDTVDPVWMRVRREAEEAVKREPELATFIYSTILH
                     HDTLEGAIVYRLSERLDHAALSGELIRQAYKDALEDTPSIGESFRADIVATLDRDPAT
                     HRLLEPVLYFKGFHAIQTHRLAHWLWSKGRRDFALYLQSRSSAAFQCDIHPAARVGRG
                     IFLDHATGVVVGETAVIEDDVSILHDVTLGGTGKEAGDRHPKIRYGVMIGAGAKILGN
                     IEVGHCARIAAGSVLLKSVPNNVTVAGVPARVVGRAGCPEPSRTMDQMLYDEI"
     gene            2251..2463
                     /locus_tag="VNY79_03860"
     CDS             2251..2463
                     /locus_tag="VNY79_03860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3126 family protein"
                     /protein_id="HWX71615.1"
                     /translation="MDVQEVKKLDAYLKKLFGNARVRVVPRPKKDDSAEVYVGDEFIG
                     VLFVDDEDDERSYNFQMAILGSDLDG"
     gene            complement(2602..3351)
                     /locus_tag="VNY79_03865"
     CDS             complement(2602..3351)
                     /locus_tag="VNY79_03865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71616.1"
                     /translation="MKRVVRQDDGSRTSSAKSPPENRRFLRPPFVTLVVLGGVGAFVA
                     YMLWPTWPNAPIAVDAPAIPITVAGVLFNVPPAAIRAKVLRHPGTHERIDLAFLWPSL
                     TPPPADAKADKPAAKAEQDAAAPPANASDRLFVTIAALGAVLAPAERLRSIYPRYVEA
                     QATAGPDGLAFLPFRAGTPYQGEDLVYLGEQPEQFFARCTRPNGPVRGTCIHERSLDA
                     AEITLRFPREWLEDWRGLAAGFDRLLAQLHP"
BASE COUNT          572 a         1113 c         1142 g          583 t
ORIGIN      
        1 aatcatcgac cgccatctgt gcggcagtga ccgagcccgg cccgtccgca gtcgccgacg
       61 gaccggagag atcggtgagg acgccgatct tcaccacgtc atcggaaatc tgcgcttggg
      121 cgaacccgtt cgagcagatc agcagcgccg caacacagag cggaaagagg cgtcgcatcg
      181 cgtcctccct tcggcgccat cgcgccggat gcttgtcgca ggtttcggct ttccggtcac
      241 ccggcgggga agcgaatgtc cgcatccgcg ccggagtttt tgggactatg ccgagcgagc
      301 gggggcgtgc cagatcgctt catgtcgtga aaccgcgaca ttccgcgctc gttgcggatg
      361 ttgtttgaag acgttacgtg gccttccggt tgtggtcaag aatacgggcg gccggcggcc
      421 gcccgtcggt gggtcggcat cttttcacgc cttgtcgcgc ggatcgttta tggtcgggca
      481 tgccacgatt tgcacatgac ggcgtcgaga ttgcctttct cgatgagggt gagggcgagc
      541 cgatcgtgct cgtgcacggc ttcgcgtccg gcaaggaggt gaactgggta tttcccggct
      601 gggtgacgac actcacgcgc gcgggccgcc gcgtcatcgc gctcgacaat cgcggccatg
      661 gtgaatcgac gaagctgtac gagcccgccg cctatcatag ctccgccatg gccgaggatg
      721 tgcgcgcgct catcgatcat ctcggcctcg gccgtgcgga cgtcatgggc tattcgatgg
      781 gggcgcggat caccgcgttc ctggcgctgg cgcacccgga gcgcgtgcgc tccgcgatcc
      841 tcggcgggct cggctatcac ctcgtcgagg gcgtcgggtt gacggaaaca atcgcgcagg
      901 cgctcgaagc tccctcgcgc gccgacatcg ccgatccgac agccctcgtg ttccgcactt
      961 tcgccgagca gacaaaatcc gatctgcgcg cgctcgccgc ctgcatgcgc ggctcgcgcc
     1021 agacgctgag caaagccgag gtcggccgca tcgcggtgcc agtgttggtt gcggtcggca
     1081 gcaacgaccg catcgcgggc tcggcggacg ctctcgccgc gcttattccc ggcgccgaag
     1141 cgctggtcat tcctggccgc gatcacatgc tcgccgtcgg cgaccgggta ttcaaggcgg
     1201 cggtcctgga tttcttggcg cagcggcctt gaagcatgca agataggcca ttgaccctca
     1261 tattatccgc caatggccgc cacactcggc catcgcctgc agcgggccga cccctggttt
     1321 gtagctcgcg ccgccccaac tatgatagaa cgcgtcgttc ccggaggctc tcgatggcgc
     1381 aatatcaagc gaagcccgtg ctcgatacgg tcgatcccgt atggatgcgc gttcgtcgtg
     1441 aggcggagga agcggtcaag cgcgagccag aactcgcgac cttcatctat tcgacgatcc
     1501 tccaccacga cacgctggaa ggggcgatcg tctatcggct gtcggagcgg ctggaccatg
     1561 ccgcgctgtc gggcgagttg atccggcagg cctacaagga tgcgctcgaa gacactccct
     1621 cgatcggcga gagcttccgc gccgacatcg tggcgacgct ggaccgcgat cccgcgaccc
     1681 accgcctgct cgagcccgtg ctctacttca agggcttcca tgcgatccag acccatcgcc
     1741 tcgcgcactg gctctggagc aagggccgcc gcgatttcgc gctttacctg cagagccgct
     1801 cctcagcggc gttccagtgc gacattcacc ccgccgcgcg cgtcggtcgt ggcatttttc
     1861 tcgaccacgc caccggcgtc gtggtgggtg agaccgcggt gatcgaagac gacgtatcga
     1921 tcctgcacga cgtgacgctc ggcggcaccg gcaaggaagc cggcgaccgc catcccaaga
     1981 tccgctacgg cgtgatgatc ggcgccggcg ccaagatcct cggcaacatc gaagtcgggc
     2041 attgcgcgcg cattgccgcc ggctcggttc tgctcaaatc ggtgccgaac aacgtgacgg
     2101 tcgcgggtgt gccggcgcgg gtggtcgggc gcgccggctg cccggagccc tcgcgcacca
     2161 tggaccagat gctctacgac gagatctgag cgagcgggtt cgattcatca gcgctgccgc
     2221 gcgtggcgca acagaagcag gagacgcgcg gtggacgtgc aggaagtcaa gaaactcgac
     2281 gcctacctca agaagctgtt cggcaatgcg cgcgtccgcg tcgtgccgcg gccgaagaag
     2341 gacgattccg ccgaggtcta tgtcggcgac gaattcatcg gcgtgctgtt cgtcgacgac
     2401 gaagacgacg agcggtcgta taacttccag atggcgatcc tgggcagcga tctcgacgga
     2461 tgacgcaggc cgcgggtcag acgaccgacg acagacggcg cggaagacgg ataggcccaa
     2521 cgcgccctcg gagttctgac atccgacctc tgttgtctgt tgttgtcatc cgtcatccat
     2581 catccgtcat ccgtcctcag cctacggatg cagttgcgcc aggagccggt cgaagccggc
     2641 ggcaaggccg cgccagtcct ccagccactc gcgcggaaag cgcagcgtga tctctgcggc
     2701 atcgagcgaa cgctcatgga tgcaggtgcc gcgcaccgga ccgttcggcc gggtacagcg
     2761 ggcgaagaac tgctcgggct gctctcctag atagaccagg tcctctccct ggtagggggt
     2821 gccggcccga aagggcagga acgcgaggcc gtcggggccg gcggttgcct gcgcctcgac
     2881 gtagcgcgga tagatgctgc gcaaccgttc ggccggcgcc agcaccgcgc cgagagcggc
     2941 gatggtgacg aacaggcggt cgctcgcgtt tgccggcggc gccgcggcat cctgctccgc
     3001 tttcgccgca ggtttgtcgg ccttggcatc ggccggcggc ggcgtcagcg aaggccagag
     3061 aaaggcgagg tcgatgcgct cgtgcgtgcc gggatggcgc aacaccttgg cgcggatcgc
     3121 cgccggcggc acgttgaaga gcacgccggc gaccgtgatc gggatggccg gcgcatcgac
     3181 cgcgatcggc gcgttcggcc aggtcggcca cagcatatag gcgacaaagg cgccgacgcc
     3241 gcccaggacc acgagggtga cgaacggagg acgaagaaac cgccggtttt ccggcgggct
     3301 tttggccgag gaagtgcgtg agccgtcatc ctgccgaacc actcgtttca tgcgaatcaa
     3361 cacgagtatg gcacgggcgc catttctcag gctcctcggc ttagccgtcg
//
LOCUS       DATMQB010000120         4422 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3450766, whole genome shotgun sequence.
ACCESSION   DATMQB010000120 DATMQB010000000
VERSION     DATMQB010000120.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4422
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3450766"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..260)
                     /locus_tag="VNY79_03870"
     CDS             complement(<1..260)
                     /locus_tag="VNY79_03870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71617.1"
                     /translation="MNAWGDGVVPPPRIGAGNLAMRYSRACLVALLLGLSFALGCASA
                     HAASLDEALAHFTTDDFSETSAGIGAVALSGDPRAETIIRAL"
     gene            complement(283..1602)
                     /gene="urtA"
                     /locus_tag="VNY79_03875"
     CDS             complement(283..1602)
                     /gene="urtA"
                     /locus_tag="VNY79_03875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033219 - urea binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter substrate-binding protein"
                     /protein_id="HWX71618.1"
                     /translation="MLKTTHAVAWRPRAGRWLAAAAGLALGLSAALPAWADDTIKVGI
                     LHSLSGTMAISETTLKDVMLMLIEEQNKKGGVLGKKLEAVVVDPASNWPLFAEKAREL
                     ISKDKVAVVFGCWTSVSRKSVLPVFKELDSILFYPVQYEGEESERNVFYTGAAPNQQA
                     IPAVDYLMGSEGGSVKRWVLEGTDYVYPRTTNKILEAYLKQKGVKDEDIMINYTPFGF
                     ADWQTEVSKIKAFGSAGKKTAVVSTINGDANVPFYKELGNQGLKATDIPVVAFSVGEE
                     ELAGLDTKPLLGHLAAWNYFESIKDAKNAAFIKEWQTFIKNPKRTTNDPMEAHFIGFN
                     MWVKAVEKVKSTDADKVIEALPGIEAPNLTGGVSTMLPNHHISKPVFIGEIRPDGQFD
                     VVWKTKGLVPGAAWSPYLEGSKDLEADWVKLKCGNFNKVTQKCGGAG"
     gene            1938..2366
                     /locus_tag="VNY79_03880"
     CDS             1938..2366
                     /locus_tag="VNY79_03880"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HWX71619.1"
                     /translation="MANFVSRWQFTIEWGHCDPAGIVFNSRFFEFFDWGTWTLFAAAL
                     GTKPPDLAAAFGILGLPLVDTGARFLAPARFGDAVELTSEVSEFRRSSFDVAHRLLVR
                     GELAVEGHETRVWAVRGATDPAVIRSSPVPAEVVARLREP"
     gene            2469..2951
                     /locus_tag="VNY79_03885"
     CDS             2469..2951
                     /locus_tag="VNY79_03885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012706273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HWX71620.1"
                     /translation="MARILQLTLNGRARSDAIHDNVLLLDYLREIVGLTGTKTGCDGG
                     ECGACTVLVDDQPRLSCLTLAAMVGGCRVDTVESLVTDGRLSAVQRGFHEKLGAQCGY
                     CTPGFIMASAGLLRRNPHPSEDEIREALGSNICRCTGYVKIIEAVTYAAELHAAGAPP
                     "
     gene            2948..>4422
                     /locus_tag="VNY79_03890"
     CDS             2948..>4422
                     /locus_tag="VNY79_03890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HWX71621.1"
                     /translation="MNEIVPVRTIGGYVPMVDGPEKVSGRAKYTADLAAPGMLAARIF
                     RSPYAHAEILEVDVSEAAKLPGVKAIVTGADCDKTFGVLPIARTEHPLARDRVRYCGE
                     PVAAVAAVDDATAKEALRRIKLKVRELPAYPSARAAMAPDAIDLHGHRPKNIERDVFF
                     ELGDVAAAFAAAALVREGTYNCAEVCQNQMEMHAAVADYDVERDRMTVHASTQVPYYV
                     HLMLSQILGMDMSRIRVVKPYVGGGFGCRTETLNVELIAALLAHKAGGCVRLVVNREE
                     TFITHRGRPETDIRLKIGMRRDGRITAVECECVQRGGAHSGYGVVTILYAGSMLYAIY
                     DLHNVKYVGKRVLTNTPPCGAFRGHGTVDICFAFESLLDEMAQPLAIDPFVLRRANLL
                     TAPAFTDNDLMVNSYGLPESLDWVEAASGWKARRGTLPRGKGLGMACSHYISGASKPV
                     NWTGEPHATVKLKLDFDGSIVLLTGAAEIGQGSSTILVQSVA"
BASE COUNT          743 a         1423 c         1419 g          837 t
ORIGIN      
        1 tgcagcgccc ggatgatggt ttcggcgcgc gggtcgccgc ttaaggcgac cgcgccgatg
       61 ccggcgctgg tctcgctgaa atcgtcggtg gtgaaatggg cgagcgcctc gtcaaggctc
      121 gcggcatgcg ccgaggcgca acccagcgcg aagctcaagc ccaatagcag agcgacgagg
      181 caagctcggc tgtagcgcat ggcgaggttc ccggccccga tgcggggagg cggcacgacg
      241 ccgtctcccc acgcgttcat ggtcaaagtg tcggcgcgat cgtcatcccg cgccgccgca
      301 cttctgcgta accttgttga agttgccgca cttgagcttc acccagtcgg cctcgaggtc
      361 tttcgatcct tcgagatagg gcgaccaggc ggcgccgggc acgagcccct tcgtcttcca
      421 caccacgtcg aactggccgt cggggcggat ttccccgatg aacactggct tgctgatgtg
      481 atggttcggc agcatcgtgg agacgccgcc ggtcaggttc ggcgcctcga tgcccgggag
      541 cgcctcgatg accttgtcgg catcggtcga tttgaccttc tcgaccgctt taacccacat
      601 gttgaagccg atgaaatgtg cttccatcgg atcattggtg gtgcgcttcg ggttcttgat
      661 gaaggtttgc cactccttga tgaaggcggc gttcttcgca tccttgatcg actcgaagta
      721 gttccaggcg gcgagatggc cgagcagagg cttggtatcg agaccggcga gctcttcttc
      781 gccgaccgag aacgccacca ccgggatgtc agtcgccttg aggccctggt tgccgagttc
      841 cttgtagaac ggcacgttgg cgtcgccgtt gatcgtcgac accaccgccg tcttcttgcc
      901 cgccgagccg aaggccttga tcttggaaac ctctgtctgc cagtcggcga agccgaacgg
      961 cgtgtagttg atcatgatat cctcgtcctt gacccccttc tgcttgaggt aggcctcgag
     1021 gatcttgttg gtggtgcgtg gatagacgta gtccgtgcct tccagcaccc agcgcttcac
     1081 cgagccgcct tccgagccca tcagataatc gacggccggg atcgcctgct gattgggcgc
     1141 ggcgccggtg tagaacacgt tgcgttcgct ttcctcgccc tcgtattgca ccggatagaa
     1201 caggatactg tcgagttcct tgaacaccgg cagcaccgac ttgcgcgaca ccgaggtcca
     1261 gcagccgaac acgacggcaa ccttgtcctt gctgatcagc tcgcgcgcct tttcggcgaa
     1321 cagtggccag ttcgaggccg gatcgacgac cacggcttcg agcttcttgc cgagcacgcc
     1381 gcccttcttg ttctgctcct cgatgagcat gagcatcacg tccttcagcg tcgtttcgct
     1441 gatggccatg gtgccggaaa gcgaatgcag aatgccgacc ttgatcgtat cgtcggccca
     1501 ggcgggcagc gccgccgaaa gcccgagggc gagaccggcc gcggcggcta gccaacgacc
     1561 ggcccgcggc cgccaagcga ccgcgtgagt tgttttgagc atcgcgatgt cctctgttag
     1621 acgcccgtgg accggcccgg caccgccacg cacaacccaa ttcgcaagga gcgtgccaaa
     1681 cggtcgtgcc gcctaacgca ttgtttctta ggtgctattg ccgacagtgc acggtaagcc
     1741 tatgcgctgc ccgcttaatt tgaatccgaa ccgcggcttg ccgttgccta tctattaggc
     1801 agcgatagga aaattgcgtg cgggctggtg atgcattgtt aggcaagctt tatcattgcc
     1861 agcccggctc tcggcggcaa cgatttgaca tcgacggcga agcgacgctt cgatgaagag
     1921 gtgaagggga cgacgccgtg gccaatttcg tcagccggtg gcaattcacc atcgaatggg
     1981 gacactgcga tccggccggt atcgttttca acagccgctt tttcgagttt tttgactggg
     2041 gcacctggac gctttttgca gccgcgctgg gcaccaagcc gccggatctc gctgccgctt
     2101 tcgggatctt gggtcttcca ctggtcgata ccggcgcgcg cttcctcgcc ccggcacggt
     2161 tcggcgatgc cgtcgagctg acttcggaag tcagcgagtt ccgccggtcg agcttcgatg
     2221 ttgcgcaccg gctgttggtg cgcggtgaac tcgcggtcga gggccacgag acccgcgtgt
     2281 gggccgtgcg cggcgcgacc gatcccgccg tgatccggtc tagtcccgtt cccgctgaag
     2341 tcgttgcgcg gctgcgcgag ccgtagcggc gtgaccgcgg cgcagggttg gcggccaggc
     2401 cgtttgaatg gcgcggtgga tgctggtatg aaggccgcta caaacagaaa agcggttgac
     2461 gctttcgcat ggcgcgcatt cttcagctca cgctcaatgg ccgtgcacgc agcgacgcaa
     2521 ttcatgacaa tgtgcttctg ctggattatt tgcgggaaat cgtggggctg accggaacga
     2581 aaacggggtg cgacggcggc gaatgcggcg cctgcaccgt actggtcgat gatcagccgc
     2641 gattgtcgtg cctcacgctc gctgcaatgg tcggcggctg cagggtcgat acggtcgagt
     2701 cgctggtgac cgatgggcgg ctgtccgcgg tgcagcgcgg gttccacgaa aagctcggcg
     2761 cccaatgcgg ctattgcacg ccgggattca tcatggcttc ggccggactg ctgcggcgca
     2821 acccgcatcc gagcgaagac gagattcgcg aagcgctcgg cagcaatatc tgccgctgta
     2881 ccgggtacgt gaagatcatc gaggcggtga cctatgcggc cgaacttcac gctgcaggag
     2941 cgccgccgtg aatgagatcg tgccggttcg caccatcggc ggctacgtgc cgatggtcga
     3001 cggcccggag aaggtctccg gacgcgccaa atacaccgcc gatcttgccg cgccgggaat
     3061 gctcgccgcg cgcatcttcc gcagccccta tgcgcacgcc gaaattctcg aggtcgacgt
     3121 ttccgaggcg gcgaagcttc cgggcgtgaa ggcgatcgtc accggcgccg attgcgacaa
     3181 gaccttcggg gtgctgccga tcgcccgcac cgagcacccg ctggcgcgcg accgggtccg
     3241 ctattgcggg gagccggtcg ccgccgtggc cgccgtcgac gatgcgacgg cgaaggaggc
     3301 gctgcggcgc atcaagctca aggtccgcga gctgcccgcc tacccgagtg cgcgggcggc
     3361 gatggcgcct gacgccatcg accttcacgg ccaccgcccg aagaacatcg agcgcgacgt
     3421 tttttttgag cttggcgatg tcgccgccgc cttcgccgcc gccgccctcg tccgcgaagg
     3481 cacctacaat tgcgccgagg tgtgccagaa ccagatggaa atgcacgccg cggttgccga
     3541 ctacgacgtc gagcgtgacc gcatgaccgt ccacgcgtcg acgcaggtgc cctactacgt
     3601 gcacctcatg ctgtcgcaga tactcggcat ggacatgtca cgcatccgcg tggtcaagcc
     3661 gtatgtcggc ggcggttttg gctgccgcac cgagacgctc aacgtcgaac tgatcgcggc
     3721 gctgctcgcg cacaaggccg gcggctgcgt gcgcctcgtg gtcaatcgcg aggagacgtt
     3781 catcacccat cgcggccgcc ccgaaaccga catccgcctc aagatcggca tgcgcaggga
     3841 cggccgcatc accgcggtgg aatgcgaatg cgtccagcgc ggcggcgctc attccggcta
     3901 cggcgtcgtc accatcctct acgccggctc gatgctgtac gcgatctacg atctgcataa
     3961 cgtgaagtat gtcggcaagc gcgtgctcac caacacgccg ccgtgcggcg cctttcgcgg
     4021 gcacggcacg gtcgacatct gtttcgcctt cgagagcctg ctcgacgaga tggcgcagcc
     4081 gcttgccatc gatcccttcg tactgcgtcg cgccaatctc ctcaccgcgc cggcctttac
     4141 cgacaacgac ctgatggtga acagctacgg cctgcccgaa agcctcgact gggtcgaagc
     4201 ggcgagcggc tggaaggcgc gccggggcac gctgccgcgc ggcaaaggtc tcggcatggc
     4261 ctgctcgcac tacatcagcg gcgcctcgaa gccggtgaat tggaccggcg agccgcacgc
     4321 gacggtcaag ctcaagctcg acttcgacgg ctcgatcgtg ctgctcaccg gcgccgccga
     4381 gatcgggcag ggctcgtcga ccatcctggt gcagagcgtc gc
//
LOCUS       DATMQB010000121         3912 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4373851, whole genome shotgun sequence.
ACCESSION   DATMQB010000121 DATMQB010000000
VERSION     DATMQB010000121.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3912)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3912)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3912
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4373851"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..826
                     /locus_tag="VNY79_03895"
     CDS             <1..826
                     /locus_tag="VNY79_03895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012759635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HWX71622.1"
                     /translation="AVARVLVSKHSDYAEGDIVLAPTGWRTHALSDGRGAYGPKLRKL
                     DPAAAPVTTGLGVLGMPGFTAYGGMRAIGKPQPGETVVVAAASGPVGSLVGQLAKLAG
                     ARAVGIAGGPEKCAFVKNELRFDAAIDHRADDFPAQLAAACPNGIDVYFENVGGAVWQ
                     AVLPLLNKYARVPVSGLIAQYNGTSGGDGTDRLPGTMREILSKSLTLRGFINYDFAAQ
                     YYADFLRDVGAGIADGSIRYREDIVDGLENAPEAFIGMLDGRNFGKLIVRVAVDTA"
     gene            894..1319
                     /locus_tag="VNY79_03900"
     CDS             894..1319
                     /locus_tag="VNY79_03900"
                     /EC_number="1.11.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA];
                     GO_process: GO:0006972 - hyperosmotic response [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0033194 - response to hydroperoxide
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HWX71623.1"
                     /translation="MAQRISDAEWRGDLKDGAGTLKLGSGVFEGRYSFKSRFEDGPGT
                     NPEELIAAAHAACFSMALSAALSQKGHASTRIHTKATVHFGPVTGGFAISRIELDTVG
                     QVPGIDAATFEQVAQAAKLECPVSKALAAVEVSLAAKLQ"
     gene            1463..2650
                     /locus_tag="VNY79_03905"
     CDS             1463..2650
                     /locus_tag="VNY79_03905"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007611257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003985 - acetyl-CoA C-acetyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006631 - fatty acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HWX71624.1"
                     /translation="MSSRSVVLIAPVRTAIGTFGGSLKEIPAPDLGAIAIKAAIARAG
                     LHSDEVGTAVMGNVVQAGAKMNPARQAAIHAGLPVSVPAMTVNRVCGSGAQAIVSAAQ
                     EILLGAVEAAVAGGMENMDLAPYLIARGRWGYRMGDGQLYDSMLRDGLNDAFSDEASG
                     WHTEDLVREFQVGRDAQDRWALRSQQRFAAAQAAARFEDEIVAVDIAGRKGSTVFAKD
                     EHNRPGTTLDALAALKPVFRPDGAITAGNAPGLNSGGAAVVLADEDWAESRSLDPMAR
                     LVSYGIAAVEPGMFGLGPIPAVRQALDRAGWRLSDIERVEINEAFAAIAIVVTRELGL
                     PEDIVNVEGGAIAHGHPIGATGAVLTTRLIHSMRRDGLRRGLVTLCIGGGQGIALAFE
                     IVS"
     gene            2694..3635
                     /gene="panE"
                     /locus_tag="VNY79_03910"
     CDS             2694..3635
                     /gene="panE"
                     /locus_tag="VNY79_03910"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007568257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008677 - 2-dehydropantoate 2-reductase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HWX71625.1"
                     /translation="MRTLVVGAGAIGGYFGGRLLEAGRDVTFLVRPRRAAELARTGLA
                     IRSRLGDADLPEPPLVFADKLAEPFDLVLLACKAYDLDGATASFTPAVGSDTAILPLL
                     NGIRHLDLLQARFGAAHVLGGQCVISTTLDPDGRILHLGDAHTLTFGELDGSASARIE
                     TIGSEFSGARFEARPSNAILQEMWEKWVFIAASAGITCLMRAAVGDIVAAGAADLAAT
                     LFAECAAIAAKEGFSPRPEFAEQTRAMLTAPNSPLTASMLRDIERGAPVEADHILGDL
                     LRRAASTDGLLLRIAYAHAKAYEARRARDRAAVAGAA"
     gene            3680..>3912
                     /locus_tag="VNY79_03915"
     CDS             3680..>3912
                     /locus_tag="VNY79_03915"
                     /inference="COORDINATES: protein motif:HMM:NF016513.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HWX71626.1"
                     /translation="MIRGIPRAGSLPLRSGALFDTGRLEKVLRPTGPALLFGLRLWAA
                     VCLALYIAFWLELDTPSWAGTSAAIMCQPHLGAS"
BASE COUNT          621 a         1257 c         1342 g          692 t
ORIGIN      
        1 agccgttgcg cgggtcctcg tctcgaaaca ttccgactat gccgaaggcg acatcgtgct
       61 cgcgccgacc gggtggcgca cgcacgcgct ctccgacggc agaggcgctt atgggccaaa
      121 gctgcgcaag cttgatcccg cggcggcacc ggttacgacc ggtctcggcg tgctcggcat
      181 gccggggttt accgcctatg gcggcatgcg agcgatcggc aagccgcagc ccggtgaaac
      241 cgtcgtagtc gcggctgcaa gcggaccagt cgggtcgctg gtcggccaac tcgccaagct
      301 cgccggcgcc agggcggtgg gcattgccgg cggcccggag aaatgcgcct ttgtcaaaaa
      361 cgaactgcgc tttgacgcgg cgatcgatca ccgtgcagac gatttcccag cccagctggc
      421 ggctgcttgc ccgaacggca tcgacgttta tttcgagaat gtcgggggtg ctgtctggca
      481 ggcggtgctg ccgttgctca acaagtacgc gcgcgtcccg gtcagcggtc tgatcgctca
      541 gtacaatggg acgagcggcg gtgatggcac tgatcgcctg ccgggcacaa tgcgcgagat
      601 cctgtcgaag agcctcactt tgcgcgggtt catcaactac gattttgccg cgcagtacta
      661 cgccgatttc ctgcgcgatg tcggcgctgg catcgccgac ggcagcatcc gctatcgtga
      721 ggacatcgtg gacggtctgg aaaacgcgcc ggaagccttc atcggcatgc tcgacgggcg
      781 caatttcggc aagctcattg tgcgcgtcgc ggtggacacc gcctgacgcg aggaccgggt
      841 tccagcgata agttcagccc gcagtggcgg gtccctttcg agaggagtga atgatggcac
      901 agcgaatttc cgacgctgaa tggcgtggcg acctgaagga cggcgccggc acgctcaagc
      961 ttggtagcgg cgtttttgag ggaagatatt cgttcaagtc gcgttttgag gacggtcccg
     1021 gcacaaaccc cgaggagctc attgccgcgg ctcacgcggc gtgtttctcg atggctctgt
     1081 cggcggcgct gtcgcagaag ggccacgcct cgacacgcat ccacacgaaa gctaccgtcc
     1141 atttcggccc agtgaccgga ggtttcgcga tctcccgcat cgagctcgac accgtaggcc
     1201 aagttcccgg catcgacgct gccacattcg aacaggttgc tcaggcagcc aagctggagt
     1261 gtcccgtctc gaaggccctc gcggctgtgg aagtcagtct ggcggcaaag ctccagtagg
     1321 agcccagcgc ctcgtgccgt cggcgatccc agtattgggc attgacctag gggtaattac
     1381 acctatttag gcgcctatat gctcttctgg caacgaaggt ccgcgctggc gtgcgccgct
     1441 tgactgggag aattcatcca tgatgtcgtc ccgttcggtt gttctgatcg ccccggtgcg
     1501 aaccgcgatc ggcacctttg gcggcagctt gaaggaaata cccgcgcccg atctcggcgc
     1561 catcgcgatc aaggccgcca tcgcacgcgc cgggcttcat tccgacgagg tcgggacggc
     1621 cgtcatgggt aatgtcgttc aagccggcgc caagatgaac ccggcgcgtc aggccgccat
     1681 ccatgcggga ctgccggtgt cggtcccggc gatgaccgtg aatcgcgtct gcggttccgg
     1741 cgcgcaggcg atcgtgtcgg cggcgcagga gatcctcctg ggtgcagtcg aagccgccgt
     1801 ggccggcggc atggagaata tggatctggc cccctacttg atcgcgcgcg gccgctgggg
     1861 ctaccgcatg ggcgacggcc aactttacga cagcatgctg cgtgacggcc tcaacgacgc
     1921 gttctcggat gaggcgtcgg gctggcacac cgaggatctg gtccgcgaat tccaggtcgg
     1981 ccgcgacgcg caggaccggt gggcattgcg ctcgcagcag cgtttcgccg cggcccaggc
     2041 ggccgcgagg ttcgaggatg agatcgttgc cgtcgacata gccggccgca agggctcaac
     2101 cgtctttgcg aaagacgagc ataaccggcc gggaacaacg ctcgacgcat tggcggcgct
     2161 gaaaccagtc tttcgcccgg acggggcgat caccgccggc aacgcgccgg gcctcaacag
     2221 cggcggtgcc gcggtggtac tggcagatga ggattgggcg gaaagccgca gtctcgatcc
     2281 gatggcccgc ctcgtatctt acgggatcgc cgctgtcgag ccgggcatgt tcggcctcgg
     2341 cccgatcccg gcggtgcgtc aggcgctgga ccgcgccggg tggcggctca gcgacatcga
     2401 gagagtcgag atcaacgagg cgttcgcagc catcgccatc gtcgtgacgc gcgagctcgg
     2461 cctgccggaa gacattgtca acgtcgaggg cggcgccatc gcgcatggcc acccgatcgg
     2521 ggcgacgggt gccgttctga cgacccgcct catccattcg atgcgtcgcg acggtctgcg
     2581 gcggggcctc gtgaccttgt gcatcggtgg cggccaaggc atcgccctcg cgttcgaaat
     2641 cgtctcgtga cgggctgacg ccgcgggtcg gccatctcgc aggaaggggt gacatgcgta
     2701 ctctcgtggt aggggccggg gcgatcggcg ggtatttcgg cggccggctg ttggaggccg
     2761 gtcgcgacgt gacctttctc gtgcgcccgc ggcgcgcagc ggagctggcg cggactggcc
     2821 tcgcgatccg cagtcggctt ggtgacgcgg acctgccgga gccgccgcta gtcttcgcgg
     2881 acaagctcgc cgagccgttc gacctggtgc tgctcgcgtg caaggcctac gacctcgacg
     2941 gcgcgacggc ctccttcacg ccggcggtcg gatcggacac cgcgatcctg ccgctgttga
     3001 acgggatccg tcacctcgat ctattgcagg cgcggttcgg cgctgcgcat gtgctcggcg
     3061 gacaatgcgt gatttcgacg acgctcgatc ccgacggccg catcttgcat ctcggcgacg
     3121 ctcatacgct gacctttggc gagctggacg ggtctgcttc ggcgcgcatc gagacgatcg
     3181 gcagcgaatt ctcaggcgct cgcttcgagg cgcgtccgag caatgcgatc ctgcaggaaa
     3241 tgtgggagaa gtgggtgttc attgcggcga gcgccgggat cacctgcctg atgcgggcgg
     3301 cagtcggcga catcgtcgcc gccggcgcgg cagatctcgc tgccacgctt ttcgccgagt
     3361 gcgccgcgat cgccgccaaa gaaggcttct cgccgcgccc ggaatttgcc gagcaaaccc
     3421 gggcgatgct gacggcgccg aactccccgc tgactgcatc gatgttgcgc gacatcgaac
     3481 gcggtgcgcc ggtcgaggcc gaccatatcc tcggcgacct gctccgccgc gcggcgagca
     3541 ccgacggctt gcttctgcgc atcgcctacg cccacgccaa agcctacgaa gcccggcggg
     3601 cgcgcgatag ggccgcggtc gccggggcgg cataaccagg agagcccatg caccgaagct
     3661 tgtcgtggcg ttgatgtcga tgatccgggg catacctcgg gcagggtctc tgccgctgcg
     3721 atcgggcgcg ctctttgaca cggggcggct cgagaaggtg ctgcggccga cagggccggc
     3781 gctgctcttc ggcctgcggc tgtgggcggc agtctgcctg gcgctctaca tcgcgttctg
     3841 gctcgagctc gatacaccgt cctgggccgg gaccagcgcg gcgatcatgt gtcagccgca
     3901 tctcggcgcc tc
//
LOCUS       DATMQB010000122         4572 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1585570, whole genome shotgun sequence.
ACCESSION   DATMQB010000122 DATMQB010000000
VERSION     DATMQB010000122.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4572)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4572)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4572
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1585570"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..429
                     /locus_tag="VNY79_03920"
     CDS             <1..429
                     /locus_tag="VNY79_03920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtB"
                     /protein_id="HWX71627.1"
                     /translation="VFIALLALLRFTRFGLEMRAVTQNRPMAASMGIRTGRIDALTFG
                     LGSGIAGMAGVALSQIDNVSPNLGQGYIIDSFMVVVFGGVGNLWGTFVGSFVLGIANK
                     FLEPYAGAVLGKIAILVLIILFIQKRPRGMFALKGRAVEA"
     gene            432..1583
                     /gene="urtC"
                     /locus_tag="VNY79_03925"
     CDS             432..1583
                     /gene="urtC"
                     /locus_tag="VNY79_03925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtC"
                     /protein_id="HWX71628.1"
                     /translation="MSSHFLIRSLDRGAVAFVIVIAALAVIVPALNLVAPPSSALHLP
                     TYLVALFGKYACYALLALSIDLIWGYCGILSLGHGAFFALGGYAMGMYLMRQIGTRGV
                     YANPILPDFMVFLNWKALPVYWYGFQYFPYAVLMVMLVPGVLAFVFGWFAFRSRVSGV
                     YLSIITQALTFALMLGFFRNNFGFGGNNGLTDFKDILGFNVQAETTRAALFSISCVAL
                     ILAFSLCRVIVTSKFGKVLIAIRDAEARTRFLGYRVESYKLLVFTLSACMAGVAGALY
                     VPQVGIINPSEFAPGNSIEAVIWVAVGGRGTLTGAVIGAVLVNYAKTFFTSGVLAPYW
                     LFMLGSLFIGVTLLLPRGVVGTFRHWTGLQRDRASAAAEDGVTEPLPAE"
     gene            1594..2343
                     /gene="urtD"
                     /locus_tag="VNY79_03930"
     CDS             1594..2343
                     /gene="urtD"
                     /locus_tag="VNY79_03930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter ATP-binding protein UrtD"
                     /protein_id="HWX71629.1"
                     /translation="MEALTAALLYLDGVTVSFDGFKALNNLSLAVEPGEMRAIIGPNG
                     AGKTTMMDVVTGKTRPDTGDVMFDGLHNLTRLDEAEIAELGIGRKFQKPTVFESHTVF
                     DNIELALKSDRRARSALWWRETADERRRIDELLNIIRLTAVRDRLAASLSHGQRQWLE
                     IGMLLAQDPKLLLVDEPAAGMTDAETRQTAELLKAIAREHTVVVVEHDMAFVRDLGVK
                     VTCLHEGSVLAEGTIDQVSANERVVEVYLGR"
     gene            2351..3046
                     /gene="urtE"
                     /locus_tag="VNY79_03935"
     CDS             2351..3046
                     /gene="urtE"
                     /locus_tag="VNY79_03935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter ATP-binding subunit UrtE"
                     /protein_id="HWX71630.1"
                     /translation="MLDVNAIDLHYGAAQALRAVSLKAEPGKVTCVLGRNGVGKTSLL
                     DALAGLHLVSRGTVTWEGENITALRPPERARRGISYVPQGREIFPLLTVEENLKTGFA
                     PLKRDERSVPDDVFSLFPVLKDMLRRRGGDLSGGQQQQLAIGRALVMRPRLLLLDEPT
                     EGIQPSIIKDIGRAITYLRGLGRIAIVLVEQYLDFARELGDHFAVMERGAIVYACDRD
                     NLDEGALRRAMAI"
     gene            3046..3894
                     /locus_tag="VNY79_03940"
     CDS             3046..3894
                     /locus_tag="VNY79_03940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreD"
                     /protein_id="HWX71631.1"
                     /translation="MSPELAVGTRARDDVFAGNRAVGRLAFAVAAASGASRRARVHEA
                     GSLRVRFPNADRGNALEAVIVNTAGGMAGGDRFAIDIEVGAGAALTVTTAAAEKVYRS
                     LGPDTSIDVKLEVGAGGALAWVPQETILFDQMRVARTIDVELARGASLLLAEAVVFGR
                     SAMGETVTSGSCFDRWRIRVDGTLVFAETIRLGGAIAPRLAERAIADGGVAIASVVKI
                     PGDEASVAAVRASNDSFAGEVGASAWNGIAAARLVAVDGAALHRDLVRVLMALGGAPL
                     PRLWLN"
     gene            3904..4206
                     /locus_tag="VNY79_03945"
     CDS             3904..4206
                     /locus_tag="VNY79_03945"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008121015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009039 - urease activity [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0043419 - urea catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit gamma"
                     /protein_id="HWX71632.1"
                     /translation="MHLTPREKDKLLIATAAMVARRRLERGVKLNHPEAVALISDYIL
                     EGARDGRTVAELMETGAHVLSRAQVMDGIAEMIPDIQVEATFPDGTKLVTVHEPIR"
     gene            4348..>4572
                     /locus_tag="VNY79_03950"
     CDS             4348..>4572
                     /locus_tag="VNY79_03950"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0035550 - urease complex [Evidence IEA];
                     GO_process: GO:0043419 - urea catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit beta"
                     /protein_id="HWX71633.1"
                     /translation="MIPGEYFIEDGEIELNKGREGVTLAVSNTGDRPIQVGSHYHFFE
                     TNPALKFDRKKARGMRLDIAAGTAVRFEPGQ"
BASE COUNT          701 a         1544 c         1506 g          821 t
ORIGIN      
        1 gtgttcatcg cgctgctggc gctgctgcgc ttcacccgct tcggtctgga gatgcgggcg
       61 gtgacgcaga accggccgat ggccgcctcc atgggtatcc gcaccggccg gatcgacgcc
      121 ctgaccttcg gcctcggttc cggcatcgcc ggcatggccg gcgtggcgct gtcgcagatc
      181 gacaatgtca gccccaatct cggccagggc tacatcatcg acagcttcat ggtcgtggtg
      241 ttcggcggcg tcggcaatct gtggggcacg ttcgtcggtt cgtttgtgct tggcatcgcc
      301 aataaattcc tcgaacccta tgccggcgcc gtgctcggca agatcgcgat actcgtgctc
      361 attattctgt tcattcagaa gcggccgcgc ggcatgttcg cgctcaaggg ccgggcggtg
      421 gaagcctgac gatgagttcg cacttcctca tccgttcgct cgaccgcggc gcggtggcgt
      481 tcgtgatcgt gatcgcggcg ctggcggtga tcgtgcccgc cctcaatctc gtggcgccgc
      541 catcgtcggc cttgcacctg ccgacctacc tcgtggcgct gttcggcaaa tacgcctgct
      601 atgcgctgct cgcgctgtcg atcgatctga tctggggcta ttgcggcatc ctctcgctcg
      661 gtcacggcgc cttctttgcg ctcggcggct acgccatggg catgtatctg atgcggcaga
      721 tcggcactcg tggcgtctac gccaatccga tcctgccgga cttcatggtg ttcctgaact
      781 ggaaggcgct gccggtctac tggtacggct tccagtattt cccctatgcc gtgctgatgg
      841 tgatgctggt gccgggcgtg ctcgccttcg tcttcggctg gttcgccttc cgcagccgcg
      901 tcagcggcgt ctatctgtcg atcatcaccc aggcgctcac ctttgcgctc atgctcggct
      961 tcttccgcaa caatttcggc ttcggcggca acaacggcct gaccgacttc aaggatattc
     1021 tcggcttcaa cgtccaggcg gagacgacgc gcgcggcgct gttttcgatc tcctgcgtgg
     1081 cgctgatcct ggccttctcg ctgtgccgcg tcatcgtcac ctcgaaattc ggcaaggtgc
     1141 tgatcgccat ccgcgatgct gaagcgcgca cccggtttct cggctatcgc gtggaatcct
     1201 acaagctcct cgtgttcacg ctctccgcct gcatggccgg ggtagccggc gcgctctacg
     1261 tgccgcaggt cggcatcatc aacccgagcg aattcgcgcc gggcaattcc atcgaggcgg
     1321 tgatctgggt ggcggtcggc ggccgcggca cgctcaccgg cgcggtgatc ggcgccgtgc
     1381 tggtcaacta cgccaagacg ttcttcacct cgggagtgct cgcgccgtat tggctgttca
     1441 tgctcggcag cctgttcatc ggcgtgaccc tgctgttgcc gcgcggcgtg gtcggcacgt
     1501 tccggcattg gaccgggctg cagcgcgacc gcgcttcggc ggctgccgag gacggcgtca
     1561 ccgaaccgct tcccgcggaa tgaggatgag gcgatggaag cgctgaccgc cgcacttctc
     1621 tacctcgacg gcgtcaccgt ctcgttcgac ggcttcaagg cgctgaacaa tctctccctc
     1681 gccgtcgagc ccggcgagat gcgcgccatc atcggcccga acggcgccgg caagaccacg
     1741 atgatggacg tcgtcactgg caagacccgg cccgacaccg gcgacgtcat gttcgacggc
     1801 ctgcacaatc tcacgcggct cgacgaagcc gagatcgccg agctcggcat cgggcgcaag
     1861 tttcagaagc cgacggtgtt cgagagccac accgtcttcg acaatatcga gctcgcgctc
     1921 aaatccgacc gccgcgcccg ctcggcgctg tggtggcgcg aaactgccga cgagcgccgc
     1981 cgcatcgacg agctgttgaa catcatccgc ctgaccgcgg tgcgcgaccg tcttgccgcg
     2041 agcctctcgc acgggcagcg gcaatggctc gaaatcggca tgctgctggc gcaggatccg
     2101 aagctgcttc tggtcgacga gccggccgcc ggcatgaccg acgcggaaac acggcagacg
     2161 gcggagctgc tcaaggcgat cgcccgcgaa cacaccgtgg tggtggtcga gcacgacatg
     2221 gcgttcgtgc gcgatctcgg cgtcaaggtc acctgcctgc atgaaggctc ggtcctcgcc
     2281 gaaggcacga tcgaccaggt ttccgccaac gagcgcgtgg tcgaagtgta tctgggaagg
     2341 tgaagggcga atgctcgacg tcaacgccat cgatctgcac tacggcgccg cgcaggcgct
     2401 gcgcgcggtc tcgctcaagg ccgagccggg caaggtcacc tgcgtcctcg gtcgcaacgg
     2461 cgtcggcaag acgagcctgc tcgacgcgct agccggcctg catctggtga gccgcggtac
     2521 cgttacctgg gagggcgaga acatcaccgc gctgcggccg ccggagcgcg cccggcgcgg
     2581 catctcctac gtgccgcaag gccgcgaaat cttcccgctg ctgacagtcg aggagaacct
     2641 caagaccggc ttcgcgccgc tcaagcgcga cgagcgcagc gtgcccgacg acgtgttctc
     2701 gctgtttccg gtgctcaagg acatgctgcg ccggcgcggc ggcgacctgt ccggcggcca
     2761 gcagcagcag ctcgccatcg gccgggcgct ggtgatgcgg ccgcgtctcc tgctcctcga
     2821 cgagccgacc gagggcattc agccctcgat catcaaggac atcggccgcg ccatcaccta
     2881 cctgcgcggg ctcggcagga tcgcaatcgt gctggtcgag cagtatctcg actttgcccg
     2941 cgaactcggc gaccatttcg ccgtgatgga gcgcggcgcc atcgtctacg cctgcgaccg
     3001 cgacaacctg gacgaagggg cgctgcgacg ggcgatggcg atttgatgtc acctgagctg
     3061 gcagtcggga cgcgggcacg cgatgacgtg ttcgccggca atcgcgcggt tggacgcctc
     3121 gcctttgcgg ttgccgccgc atccggggcg agccggcgag cgcgcgtgca cgaggcgggt
     3181 tcgctgcggg tccgcttccc caacgccgac cgcggcaacg cgctcgaggc cgtcatcgtc
     3241 aacaccgccg gtggcatggc cggcggcgac cgcttcgcca tcgacatcga ggtcggcgcc
     3301 ggcgccgcct tgactgttac caccgcggcc gcggaaaaag tctaccgctc gctcggaccg
     3361 gatacgtcga tcgacgtgaa gcttgaggtc ggcgccgggg gcgcgttagc ttgggtgccg
     3421 caggagacca tcctgttcga ccagatgcgg gtcgcccgca ccatcgacgt cgagctcgcc
     3481 cgcggcgcga gcctgctctt ggcggaagcc gtcgtgttcg gccgctcggc catgggcgag
     3541 accgtcacgt ccggcagttg cttcgaccgc tggcgcatac gagtggacgg cacgctcgtt
     3601 ttcgccgaga ccatccgtct cggcggcgcg atcgcgccgc ggctggcgga gcgcgccatt
     3661 gccgatggcg gcgtggctat cgccagcgtc gtcaaaattc cgggcgacga ggccagcgtc
     3721 gcggcggttc gggcgagcaa cgacagcttt gccggcgagg tcggcgcatc cgcctggaat
     3781 gggatcgcgg ccgcgcgtct cgtcgccgtc gatggcgcgg cattgcaccg cgatctcgtc
     3841 cgcgtattga tggcgctcgg cggcgcgccg ctgccgcggt tgtggctgaa ctagaggacg
     3901 acgatgcacc tgactccgcg cgagaaggac aagttgctga tcgccacggc ggcgatggta
     3961 gcgcggcgcc ggctcgagcg cggggtcaag ctcaaccatc cggaagccgt cgcgctgatc
     4021 tccgactata tccttgaggg cgcgcgcgac ggccgcaccg tcgccgagct gatggaaacc
     4081 ggcgcccacg tgctctcgcg ggcgcaggtg atggacggca tcgccgagat gatccccgat
     4141 atccaggtcg aggcgacgtt cccggacggc accaaactgg tcacggtgca tgaaccgata
     4201 cgatgattcc cttcgtgtca ctccggtccc gtattccggg gtgccgcgcc gcggtgagcc
     4261 cagaatccat attctcggac ggtgggcatg cctccgggcc ccacccttca ggtcgtaccg
     4321 aaatgacgaa cagcgaaagg ccaattcatg atccccggcg aatatttcat tgaggacggc
     4381 gagatcgagc tgaacaaagg ccgcgagggc gtgacgctcg cggtctccaa caccggcgac
     4441 cggccgatcc aggtcggctc gcactatcat ttcttcgaga ccaatccggc gctgaagttc
     4501 gaccgcaaga aggcccgcgg catgcgcctc gacatcgccg ccggcaccgc ggtgcgcttc
     4561 gagcccgggc ag
//
LOCUS       DATMQB010000123         2277 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1894562, whole genome shotgun sequence.
ACCESSION   DATMQB010000123 DATMQB010000000
VERSION     DATMQB010000123.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2277)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2277)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2277
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1894562"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..126
                     /locus_tag="VNY79_03955"
     CDS             <1..126
                     /locus_tag="VNY79_03955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HWX71634.1"
                     /translation="DIAAQIESEAAVLKLADPGSPTLIQDKESRGALYVLMPMRV"
     gene            369..1496
                     /gene="recF"
                     /locus_tag="VNY79_03960"
     CDS             369..1496
                     /gene="recF"
                     /locus_tag="VNY79_03960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011438906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HWX71635.1"
                     /translation="MIRRLTLTNFRNYRAAALATADRPIVLFGPNGAGKTNLLEAISF
                     LAPGRGLRRATLDDVASREGDGSWAVAAEVEGALGLATLGTGLERALEQSEAPSRACR
                     IDREPVGSAVAFADHLRVIWLVPAMDTLFAGAPSERRRFLDRLALAVDAEHAGRVNAF
                     ERALRSRNRLLEERLPDPQWLDAVEHETAELAVAVASLRAETVSRLAAVLADRRGSAF
                     PPAEIALDGWMEKLIPAHPAVEIEERYRAVLRDNRARDAAAGRTLDGPHLTDLSVVYA
                     DKGIAAADASTGEQKALLIGLVLAHARLIAAMTGFAPVLLLDEVVAHLDPSRRRTLHE
                     ELTQVGAQVWMTGADPALFAEVAGAASMVEVSSGRLEPRSR"
     gene            1624..1821
                     /locus_tag="VNY79_03965"
     CDS             1624..1821
                     /locus_tag="VNY79_03965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71636.1"
                     /translation="MSVEAEERITRNLIAALDRLHEDLDRVELWTAALGCFAYPAPEY
                     EPGGQYMLPPFGQPGPQRAGR"
BASE COUNT          364 a          783 c          760 g          370 t
ORIGIN      
        1 gacatcgccg cgcagatcga gagcgaagcc gccgtgctca agctcgccga tcccggttcg
       61 ccgacgctga tccaggacaa ggagtcacgc ggcgcgctct atgtgctgat gccgatgcgg
      121 gtctgaggac gacggccgga agctgcagtc gggaagctgc agtccggaag ccgcaaatcg
      181 gaagccacaa ggcggaaact ccgatatggc ggtcggagcg gcccacggcc cggttgcgac
      241 atcggagcgc ttccgttccg gcatcgcccg ctattctggt tcccgttctg atctccgccg
      301 tccggcgtct ggttttccgg tcgctgacct ccaacctctg atttccggcc ctccacgtcc
      361 gactgctgat gatccgccgc ctgacgctga ccaatttccg caactaccgc gccgcggcgc
      421 ttgcgaccgc cgacaggccg atcgtgctgt tcgggccgaa cggcgccggc aagaccaatc
      481 tgctcgaggc gatctcgttt ctcgcgcccg gccgcggcct gcgccgcgcc acgctcgatg
      541 atgtggcgtc ccgcgaaggg gacggctcct gggcggttgc cgccgaagtc gaaggcgcac
      601 tcgggctcgc gacgctcggc accgggctcg agcgcgcgct cgaacagagc gaggcgccgt
      661 cgcgcgcctg ccgcatcgac agagagccgg tcggttcggc ggtcgccttc gccgaccacc
      721 tgcgcgtgat ctggctcgtt ccggcgatgg atacgctgtt tgccggcgcg ccgtcggagc
      781 ggcgccgctt tctcgaccgg ctcgcgctcg cggtcgacgc cgagcacgcg ggccgagtga
      841 acgcgttcga acgcgcgctg cgctcgcgca accgcctgct cgaggaaagg ctgcccgacc
      901 cgcaatggct cgacgccgtc gagcacgaga cggcggagct tgcggtggcg gtcgcctcgt
      961 tgcgcgccga gacggtgagt cgcctcgccg ccgtgctcgc ggaccggcgc ggctcggcct
     1021 ttcccccggc ggagatcgcc ctggacggct ggatggaaaa gctcatcccg gcccatccgg
     1081 cggtcgagat cgaagagcgc taccgcgccg ttctgcgcga caaccgcgcg cgcgatgccg
     1141 ccgccgggcg cacgctcgac ggcccgcacc tgaccgacct ctcggtcgtg tacgccgaca
     1201 agggaattgc cgccgccgat gcttcgaccg gcgagcagaa ggcgctgctc atcgggctgg
     1261 tgctcgcgca tgcgcggctg attgcggcga tgacggggtt tgcgccggtg ctgctgctcg
     1321 acgaggtcgt cgcccatctc gatccgtcgc gacgccgcac gctccatgag gaactcacac
     1381 aggtcggcgc gcaggtgtgg atgaccggtg ccgacccggc actgttcgcg gaggtcgcgg
     1441 gcgcggccag catggtggaa gtcagctccg gccggcttga acccagatcc cgctaaggac
     1501 ggagcgggga taccgctcca cttttcggac ggccggcgct ggcggtccgg gaaccagagt
     1561 gcgaggtcgc ctcttatccc caagaagccg gaaatgtcgg ttgcggaacg aggtgcaaca
     1621 acaatgtcgg ttgaggcgga agaacgtatt acccgcaatc tcatcgcggc gctcgatcgc
     1681 ctgcatgagg atttggaccg cgtggaactt tggaccgccg cgctgggttg ctttgcctac
     1741 cccgcacccg aatacgagcc cggcgggcag tacatgctgc cgccattcgg ccagccgggg
     1801 ccgcagcgcg ccggacgata gctgcccagc gcgaccggtt ttgcggtcgc ttgtcgtgtg
     1861 ccgacctctc cctggaaggg ccgataaact gcctcgaccg gaggcgcgaa agcgcgcgcc
     1921 gggcggcccg ccgaggcctt gcggaggggg gctcggccgc gccggtcgca ctgcggcaaa
     1981 accttgaaaa atgccgattc gacaatatct taatcccgat cactttgccc tgtaaaagcc
     2041 cccgctttgg tgtacaacga aagcgtgatt caattccttt ctcgcaagcg attcgcaggt
     2101 cctccgcatg gccgaagcca tccgtaaacc accccgcatt gcaccctccg actacgacgc
     2161 ggaatcgatc aaggtgctca aggggctcga tgccgtgcgc aagcggccgg gcatgtatat
     2221 cggcgacacc gatgacggct ccggcctgca ccacatggtc tacgaggtcg tcgacaa
//
LOCUS       DATMQB010000124         3087 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3755711, whole genome shotgun sequence.
ACCESSION   DATMQB010000124 DATMQB010000000
VERSION     DATMQB010000124.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3087)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3087)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3087
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3755711"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..403
                     /locus_tag="VNY79_03970"
     CDS             <1..403
                     /locus_tag="VNY79_03970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="nitrite/sulfite reductase"
                     /protein_id="HWX71637.1"
                     /translation="YCSLANTRSIPVAQEIASRFRNLDVARDLGRLHINISGCINACG
                     HHHVGHIGILGVEKNDEEFYQITIGGRADEDARLGALIGPAVRYAEVADVVEDIVAAY
                     LELRERPQETFPQVVQRTGIEPFKERVYAAR"
     gene            390..950
                     /locus_tag="VNY79_03975"
     CDS             390..950
                     /locus_tag="VNY79_03975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF934 domain-containing protein"
                     /protein_id="HWX71638.1"
                     /translation="MPLVKRGRIVADPYVRVVDDAPVADDVAVILPAARFLADAAELA
                     QRATPTGVLWPNDRRVADLAPWLDRLALVALAFPSFRDGRAYSQARQLRERYGFGGEL
                     RATGDVLRDQFLFFIRAGFDSLEVRKDADAAAFAEAVGRYSVFYQPSADGRASTARQR
                     LLSRPERNTAETAQAARSAAAFADSN"
     gene            complement(1013..1426)
                     /locus_tag="VNY79_03980"
     CDS             complement(1013..1426)
                     /locus_tag="VNY79_03980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HWX71639.1"
                     /translation="MLSRRKFSACALCAAVGFAATEAQAQSTQAGPGFKRTILQKTEL
                     PDSKYVTLLVAVDIDPGTVVARHTHPGVESTYVAEGEFELTVKGQPAKTIKVGDGFQV
                     PPETPHSARNGDKLTRLVVTYVVDKDKPLASPAPE"
     gene            1551..2372
                     /locus_tag="VNY79_03985"
     CDS             1551..2372
                     /locus_tag="VNY79_03985"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HWX71640.1"
                     /translation="MSEHSRLYAIHSDEECERLELQARLANIQGHLRHLPIAPNARVL
                     DAGCGSGAMSRLIARSFPRTEIVAVDVRQEYLDYAEALTRAEGIRNITFRKVDIFSLP
                     FPDGSFDIVWSKYLLQWLNEPKLALAELKRITKPGGFVVSCDMVGVTVDHFPIQPDFN
                     RRVRDVIGALADCEIGRKVAPFMIALGFRDVRVRIETDTIFTVIGSIDPERRWNCEKL
                     LQSARPQLAQIVGSELAADQFIERLMAHYDDPMTCSYAALYFTRGRVRGLTPIDL"
     gene            complement(2397..2708)
                     /locus_tag="VNY79_03990"
     CDS             complement(2397..2708)
                     /locus_tag="VNY79_03990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71641.1"
                     /translation="MKRFLIKYRRQNTPQEAWHRDIAEFIAALDADPALQGKISYCCM
                     KSRDGADYYHLATAADEQAVKALQQHPSFSRYTEKTREAAGGAVDVLPLEVVAETKWR
                     A"
BASE COUNT          493 a         1049 c          995 g          550 t
ORIGIN      
        1 ctactgcagc ctcgccaata cgcgctcgat cccggtcgcg caggagatcg ccagccgctt
       61 ccgcaacctc gacgtggcgc gcgatctcgg ccggctgcac atcaacatct ccggctgcat
      121 caacgcctgc ggccatcatc atgtcggcca catcggcatt ctcggcgtcg agaagaacga
      181 cgaggagttc tatcagatca cgatcggcgg gcgcgccgac gaggacgccc ggctcggcgc
      241 cctgatcggt cccgcggtgc gctacgccga ggtcgccgat gtggtcgagg acatcgtcgc
      301 cgcctacctc gagctgcgcg agcggccgca agagactttc ccgcaggtgg tgcaacgcac
      361 cggcatcgag ccgttcaagg agcgcgtcta tgccgctcgt taagcgcggc cgcatcgtcg
      421 ccgatcccta tgtgcgtgtc gtcgatgacg cgccggttgc cgatgacgtt gccgtcatcc
      481 tgccggcggc acggttcctc gccgatgcgg cggagctcgc tcagcgtgcg acgccgaccg
      541 gcgtgctgtg gccgaacgac cgcagggttg ccgacctcgc gccgtggctc gaccggctgg
      601 cgctggtggc gctggcgttt ccgagcttcc gcgacggccg cgcttacagc caggcccggc
      661 aattgcgcga gcgctacggc tttggcggcg agctgcgcgc caccggcgac gtgctgcgcg
      721 atcagttctt gttcttcatc cgcgccggct tcgattcact cgaggtcagg aaggacgccg
      781 acgccgcggc cttcgccgag gccgtcgggc gctacagcgt gttctatcag ccgagcgcgg
      841 acggacgcgc ctcgacggcg cggcagcgcc tgctgtcgcg gccggagcgg aacacggcgg
      901 agacggcgca ggcagcgcgt tccgccgcgg cgttcgcaga cagcaactga cgctatagcg
      961 ctaaactgac caacatcgac gcgacactat ttcttgcgca cccgtcgcga gctcattccg
     1021 gcgccggcga ggcgagcggc ttgtccttgt cgaccacgta ggtgacaacc aatcgggtca
     1081 gcttgtcgcc gttgcgcgcg ctgtgcgggg tctcgggcgg gacctgaaag ccgtcgccga
     1141 ccttgatcgt cttcgccggc tgacctttga ccgtgagttc gaactcgcct tccgcgacgt
     1201 acgtggactc gacgcccgga tgggtgtgcc gggcgacgac agtgccgggg tcgatatcaa
     1261 cagcgacgag gagtgtgacg tacttgctat cgggcagttc cgtcttctgc aggatcgtgc
     1321 gcttgaaccc gggccctgcc tgcgtgcttt gcgcttgggc ctcggtcgcc gcaaaaccga
     1381 ccgcggcgca gagtgcgcat gcgctgaatt tccttcgcga cagcatggcg ctttcctccc
     1441 tttcttcgtt gacggataag caagactagc aaccgcgaac gcacgcgcct agggtcttgg
     1501 tccggcgctc gcacggcgct aggctcgccg cccgcaacgc aggttccgcg atgtccgagc
     1561 attcacggct ctacgccatc cacagcgacg aggagtgcga gcgcctggaa ttgcaggcgc
     1621 ggctcgccaa catccagggc catctgcgcc acctgccgat tgcgccgaac gcgcgcgtgc
     1681 tcgacgctgg ctgcggctcc ggcgcgatgt cgcggctcat cgcgcgctcg tttccgcgca
     1741 ccgagatcgt cgctgtggac gtgcgccagg agtatctcga ctatgccgaa gcgctgacgc
     1801 gcgccgaggg catccgcaac atcaccttcc gcaaggtcga catcttctcc ctgcccttcc
     1861 ccgacggcag cttcgacatc gtctggagca aatatctgct gcagtggctc aacgagccga
     1921 agctggcgct ggccgagctc aagcgcatca ccaagccggg cggattcgtc gtttcctgcg
     1981 acatggtcgg cgtcactgtc gaccattttc cgatccagcc ggatttcaac cgccgggtcc
     2041 gcgacgtcat cggcgcgctc gccgactgcg agatcgggcg caaggtggcg ccgttcatga
     2101 tcgcgctcgg atttcgcgac gtgcgggtgc ggattgagac cgacaccatc ttcacggtga
     2161 tcggcagtat cgacccggaa cgacgttgga attgcgagaa gctgctccag tcggcgcggc
     2221 cgcagctcgc gcagatcgtc ggatcggagc tcgccgccga ccagttcatc gagcgcctga
     2281 tggcgcatta cgacgacccg atgacctgca gctacgcggc gctgtatttc acgcgcggcc
     2341 gcgtccgcgg cctcaccccg atcgatctct gaccgccaac ttgtcggcag cttcgctcag
     2401 gcccgccact tggtctcggc gacgacctcc agcggcagca cgtcgaccgc gccgccagcg
     2461 gcctccctgg tcttctccgt gtagcgcgag aacgacggat gctgctgcag cgccttgacc
     2521 gcctgctcgt ccgcggcggt ggcgagatga tagtagtcgg cgccgtcgcg gctcttcatg
     2581 cagcaatatg agatctttcc ctgcagcgcg ggatcggcgt cgagagccgc gatgaactcc
     2641 gcgatatcgc ggtgccaggc ttcctgcggc gtattttgcc ggcgatattt gatgagaaaa
     2701 cgcttcatgc ccgctcctcg cttgagccat tcccgccgcc gcccggcgcg ccgtggcgac
     2761 aaccggccgg cctggcttcg acattccctc ttgtcactag ggccgagaac aaacgtaaat
     2821 gcaagtacgg acaaaaatga tactgtgagg cagttggcca agtcgatacc tgggccattg
     2881 cggagcacga gcgtcgatgc cgaatgccct gtcgagacga atccaccgct gcccggtcac
     2941 agcgtttcag aagatgatca gcggcaagta caagctgcgc atcctgtggg atctgcagga
     3001 cgggccgctg cgctacggcg agatcagaag cgggctgctg cgcggcgccg acgggtcgcc
     3061 gccgattgcg ccgcgcgtgc tgagccg
//
LOCUS       DATMQB010000125         6055 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_966687, whole genome shotgun sequence.
ACCESSION   DATMQB010000125 DATMQB010000000
VERSION     DATMQB010000125.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6055)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6055)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6055
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_966687"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1044
                     /locus_tag="VNY79_03995"
     CDS             <1..1044
                     /locus_tag="VNY79_03995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HWX71642.1"
                     /translation="AEPFLDLSGEDIRRRLFLTSDPHGRELCLRPDLTIPVSRAYLQS
                     PRASEAAGFCYLGSVFRHREGAEAEFVQAGIESFARHDKASADAEMLTLGLEATALYG
                     LTTPQIRIGDVGLFSAFVAALDLAPAWKRRLIKDFNRKSTLAHDLDRLALTAASRPPE
                     YQGVLAALAGSDPNAARHLVADLLSIAGIEAVGGRSVDEIAERFLEQSALGAGTRLPH
                     ETRALIERFLSVRADPDEAASELHALAADAAIALDAALDLFETRTGFLAARGVDVQSL
                     EFATAFGRGFDYYTGFVFELHDARAKGPLVAGGRYDGLLSRLGAPEPIAAVGFAASIE
                     ELAACAGGDGDAP"
     gene            1041..2036
                     /gene="hisG"
                     /locus_tag="VNY79_04000"
     CDS             1041..2036
                     /gene="hisG"
                     /locus_tag="VNY79_04000"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003879 - ATP phosphoribosyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HWX71643.1"
                     /translation="MSAPLILAVPAKGRLQQNAEAFFARSGLELVKPRGARDYRGAIA
                     GFPGVEIAYLSAAEITAQLGQGALHLGVTGEDLVRELIPDADRRVVLIDRLGFGFANV
                     AVAVPQAWIDVRSMADLDDVATAFRLKHERKMRLATKYANLARGFFAEHGVVDYRIVE
                     SSGATEAAPAAGTAEFIVDITTTGATLAANGLKVIEDGVILRSQANLVAARAAPWDAA
                     QRETARLLLDRVAAQKRARSYREVRTRFAGLNETLLDATREKFGVAAPFGGPTSSGML
                     TLHCPPENVHALASFLREQGAEAVSVVALDYVYVRDNALYARLAAELDRSKPGRQ"
     gene            2655..2948
                     /locus_tag="VNY79_04005"
     CDS             2655..2948
                     /locus_tag="VNY79_04005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71644.1"
                     /translation="MAEERNEDEERPCLHCLMVEMIDDFFAEYPVSTDEPDAIDTEEV
                     ITAVAKTVAELTYSQDGTGRQNMIEQLMREIMSYDAEYRQQDELGAAGSGARH"
     gene            3015..3818
                     /locus_tag="VNY79_04010"
     CDS             3015..3818
                     /locus_tag="VNY79_04010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HWX71645.1"
                     /translation="MKSSGYRQLHIRRDARPQGVIAYATIENTGKLNAINSALMGELV
                     EGMGELAGDDRLRAVVLTGAGPKAFIAGVDINEMAHIENGAQATAFITRLHQCCAAIR
                     DMPVPVIARIQGYAFGGGLELAAACDVRIAADAAVFGMPEVKLGIPSVIEAALLPTLV
                     GWGRAREMMYLGENFTADEALQWGLVEHVVPASALDAAVEAWIAKLLTSAPRAVRLQK
                     RLIRRWEDLPLAAAVQAGVEAFAAAYETDEPGAAMGKFLAAREARKSGG"
     gene            complement(3929..4480)
                     /locus_tag="VNY79_04015"
     CDS             complement(3929..4480)
                     /locus_tag="VNY79_04015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HWX71646.1"
                     /translation="MTRVSRYRSARAKLAAGWRDRALSLKAVAFGLVGVVNTVVDYGV
                     FLFARAEFDQSPAALATFTQLSSACGCGDAAVISLIAANTLSWLVAVTGSYIMNSSIT
                     FAAESGRELRWRAYFAFVASGVAGWLANTAALLVAAEVLLLPVWLAKALAILASFIVN
                     FSLSHFVVFRVRPGAENKARNDA"
     gene            4655..5716
                     /locus_tag="VNY79_04020"
     CDS             4655..5716
                     /locus_tag="VNY79_04020"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HWX71647.1"
                     /translation="MPSPARADKRVAGDAGADRAGGAAPGLSIVVPLHNEHASLARLH
                     VQLAEVARELRATRSLGCEVVYVDDGSRDDTLVIAHGLPATTLDVQVVSLSRNFGKEA
                     ALLAGLDHARLGAILFIDGDGQHPTALIGTMVRHWLDDGYDVVYTAKEDRANEPLTRR
                     LGVKSFYLLLNWGARTKIPEDAGDFRLLSPRAATALRALPERNRFFKGLSSWIGFRQI
                     RIDYQPEPRADGRSTWNLRSLIGLSIDGLTGFSVAPLRFATMLGLLLALTAFLYGAEI
                     LYETWVYGAKIPGYPSLFVGVMVLGGVQLIMLGVVGEYIGKILYEIKGRPVYFVSEHA
                     VKLREEAGRPESDARTAAE"
     gene            complement(5750..>6055)
                     /locus_tag="VNY79_04025"
     CDS             complement(5750..>6055)
                     /locus_tag="VNY79_04025"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HWX71648.1"
                     /translation="RPGFTWAGVKTVTAMREWPDWRPPDEMIERRPDLPRYMAGGPEN
                     PLGARALYLGSTLYRIHGSNEPWSIGSQVSSGCIRMRNDDVTDLYDRVKVGTKVVVM"
BASE COUNT          999 a         2077 c         2000 g          979 t
ORIGIN      
        1 gcggagccgt ttctcgacct ctcgggcgag gacatccgcc ggcggctgtt tcttaccagc
       61 gatccccacg gccgcgaact gtgcctgcgg cccgatctca ccattccggt ctcgcgcgcc
      121 tatctgcaat cgccgcgggc cagcgaggcg gccggcttct gctatctcgg atcggtgttt
      181 cgccatcgcg agggcgccga agccgagttc gtgcaggccg ggatcgagtc cttcgcccgg
      241 catgacaagg cgtcggccga cgccgaaatg ctgacccttg ggctcgaggc gaccgctctc
      301 tacggcttga cgacgccgca aattcgcatc ggcgacgtgg ggctgttctc cgccttcgtc
      361 gccgcgctcg atctcgcacc ggcgtggaag cgccgcctga tcaaagactt caaccgcaaa
      421 tccacgctcg cccacgatct cgaccggctg gcgctcaccg ccgcgagccg gccgccggaa
      481 taccagggtg tgctggccgc gctcgccggc tccgatccca acgccgcccg tcacctcgtc
      541 gccgatctcc tctcgatcgc cggcatcgaa gcggtcggcg gccgttcggt cgacgagatc
      601 gccgagcgct ttctcgaaca atcggcgctc ggcgcgggaa cgcggctgcc gcacgagacc
      661 cgcgcgctga tcgagcgctt cctgtccgtg cgtgccgatc ccgacgaagc agcaagcgaa
      721 ctgcacgcgc tcgccgccga tgccgcaatt gccctcgacg ccgcgctcga tttgttcgag
      781 acccgcaccg gctttctagc cgcccgcggc gtcgacgtgc aatcgctcga attcgcgacg
      841 gcgttcgggc gcggcttcga ctactacacc ggcttcgtct tcgaactcca cgatgcgcgg
      901 gccaagggcc cgcttgtcgc cgggggacgc tatgatggcc tgctctcccg gctcggcgcg
      961 cccgaaccga tcgcggccgt cggctttgcc gcctcgatcg aagagcttgc ggcgtgcgca
     1021 ggcggcgatg gggacgcgcc atgagcgcgc cgctcatcct cgccgttccc gccaagggcc
     1081 gcctgcagca gaatgccgag gcgttcttcg cgcgctccgg gcttgaactc gtgaagccgc
     1141 gcggggcccg cgactatcgc ggcgccatcg ccggcttccc gggcgttgag atcgcctacc
     1201 tttctgcggc ggaaatcacg gcgcagcttg ggcaaggcgc gctgcatctc ggggtgaccg
     1261 gcgaagacct ggtacgcgag ctgatccccg atgccgaccg gcgggtggtg ctcatcgacc
     1321 ggctcggctt cggcttcgcc aatgtcgccg tcgccgtgcc gcaggcctgg atcgacgttc
     1381 gcagcatggc cgatctcgac gacgtcgcca ctgccttccg gctcaagcac gagcgcaaga
     1441 tgcggcttgc caccaaatac gccaatctcg cccgcggctt cttcgccgag cacggcgtcg
     1501 tcgactaccg catcgtggaa agctccggcg cgaccgaggc ggcgccggcg gccggcaccg
     1561 ccgagttcat cgtcgatatt accacgaccg gcgccacgct cgccgccaac ggcctcaagg
     1621 tgatcgagga cggcgtcatc ctgcgctcgc aggctaacct cgtcgccgcg cgggccgccc
     1681 catgggatgc ggcgcagcgt gagaccgccc gcctcctgct cgaccgcgtc gccgcgcaaa
     1741 agcgcgcccg ctcgtaccgt gaggtgcgca cgcgctttgc cggcttgaac gagaccttgc
     1801 tcgacgctac gcgcgaaaaa ttcggcgtcg ccgcgccgtt cggcggcccg acctcctccg
     1861 gcatgcttac gctccactgc ccgcccgaaa acgtgcatgc gctcgcgagc ttcctgcgcg
     1921 agcaaggcgc cgaggcggtc tcggtcgttg cgctcgacta cgtttacgtg cgcgacaacg
     1981 cgctctatgc gcggcttgcg gctgagctgg atcggagcaa gcctgggcgg caatgaacgg
     2041 ccgacggccg cgatgctgcc gtcatctgct cattcccccg atgcacctct catatggcag
     2101 gacaaaactc ttggccattt gtcccattgc cggataggag cggtggggta ggccccgagg
     2161 tttgagtact caacgaaggt gaagcgaccc ggcttcagac atctgcgcag cccggtcaaa
     2221 taacttgcca tgacgtcgcg ctcggacacc cggcgatcca ggtcaaaaat ccagcgtaag
     2281 tatagagggc gtcaagttac gggtcattcc ttgccgcaga gcttgcgcca cgcggcacgc
     2341 gcgctcgccg gcccatgggc gttaaagtcc gccccttcgc gattgtgagc gtgggcgcag
     2401 gtccaagcga tcccgtcgat atcgccggaa gatcgcggtc gccgggccgg cgcgcgacga
     2461 cgcgccccat ctccttcgcg gtccggccgt cctgaccttg caacgcctaa agcccacggg
     2521 catggcaatg cttgctttgc ctgcttatgt ctcattgacc tggacagcga ggctgctggg
     2581 gttagaaagg caccgtcatc gccgtccgat cggcgggaca cgacacaccg ggcgcaagaa
     2641 gcggaagggc ggccatggca gaagagcgaa acgaggacga ggaacggccg tgcctgcatt
     2701 gtctgatggt cgagatgatc gacgacttct ttgcagagta tcctgtctca accgacgagc
     2761 cggacgccat cgacacggag gaagtcataa ccgccgttgc aaaaacggtg gcggagctga
     2821 cctatagcca ggacggcacc ggacgccaaa acatgatcga acagctgatg cgtgagatca
     2881 tgagctatga cgccgaatat cgccagcagg atgagctggg cgccgccggc tccggcgcgc
     2941 ggcattagat cggcgcaagg gcctgaccgg caccgtgatc ggtcgggcgc cgcgggcggc
     3001 ttgaggggca ggcgttgaaa tcctctggct atcgacaact gcacatccgt cgcgacgcaa
     3061 ggccgcaggg cgtcatcgcc tacgcgacca tcgagaatac cggcaagctc aacgcgatca
     3121 acagcgcgct gatgggcgag cttgtcgagg gcatgggcga gctcgccggc gacgatcgcc
     3181 tgcgcgccgt cgttctcacc ggggccgggc ccaaggcctt tattgcgggc gtcgacatca
     3241 acgagatggc gcacatcgaa aacggcgcac aggccacggc tttcatcacc cgcctgcacc
     3301 agtgttgcgc ggcgatccgc gacatgccgg tgccggtgat cgcccgcatc cagggctacg
     3361 cgttcggcgg cggcctcgag ctcgcggcgg cgtgcgatgt gcggattgct gccgacgcgg
     3421 ccgtgttcgg catgcctgaa gtcaagctcg gcattccctc ggtcatcgaa gcggcactgt
     3481 tgccgacgct ggtcggctgg ggacgcgccc gcgagatgat gtatctaggc gaaaacttca
     3541 ccgccgacga agctctgcaa tggggactgg tggagcatgt ggtgccggcg tcggccctcg
     3601 atgcggcggt cgaggcctgg atcgccaagc tgttgacctc ggcgccgcgc gcggtgcggc
     3661 tgcaaaagcg gctgatccgg cgatgggagg acctgccgct cgccgctgcc gtgcaggcgg
     3721 gcgtcgaggc gttcgccgcg gcctacgaga ccgacgagcc cggcgccgcc atgggcaaat
     3781 ttctcgccgc ccgagaggcg cgcaagagcg gcggttagcg caccgccaag atcattgctc
     3841 gcctacgtgc tgcgcctgcg ccacgggcac caccgcagcc gtccgttgcc agctgccgct
     3901 cgcgccctcc ggccgcgccg tgtccatttc aagcatcgtt ccgcgccttg ttctcggcgc
     3961 ccgggcgcac tcgaaagacg acgaaatgcg agagcgagaa attcacgatg aagctcgcga
     4021 ggatggccag cgccttcgcc agccacacgg gcagcagcag gacttcggcg gcgaccagca
     4081 gggcagccgt gttggcgagc catccggcca cgccggaggc gacgaaggcg aaataggcgc
     4141 gccatctgag ctcgcgtccg gactccgcgg cgaaggtgat cgacgaattc atgatgtagg
     4201 agccggtgac ggcgacgagc cacgacagcg tgttggcggc gatcagggaa atgaccgcgg
     4261 catcgccgca gccgcaggcg ctggacagct gcgtgaacgt cgccaacgcg gccggcgatt
     4321 ggtcaaactc ggctcgtgcg aacaaaaaca cgccgtagtc gacgaccgta ttgaccacgc
     4381 cgaccaggcc gaaggcgact gccttgaggc tgagcgcgcg gtcgcgccag ccggcggcga
     4441 gcttggcgcg ggccgagcga tagcgggaga cgcgggtcat cgccgcctcg catatcacgt
     4501 tctccaccat ccgccagcat tgcggcttgg tgacgcgaga ccccgcgggc gacagtcgcg
     4561 gccggttgcg ctatagatcg gccgcgaaag gacggcgcaa gtggccgata caacagcaac
     4621 cggaccggcg gcgcagccgc gtacgctgcg cggcatcccc tcacccgcac gcgccgacaa
     4681 gcgcgtcgcc ggcgatgccg gcgcggaccg cgccggcggc gcggcgcctg ggctttcgat
     4741 cgtggtgccg cttcataacg agcacgcgtc gctcgcgcgc ctgcacgtcc agcttgctga
     4801 agtcgcgcgc gaactccgcg ccacgcgttc gctcggctgc gaggtggtct atgtcgacga
     4861 cggcagccgc gacgacactc tcgtgatcgc ccatggcctg ccggcgacga cgctcgacgt
     4921 gcaggtcgtt tcgctctcgc gcaatttcgg caaggaggcg gcgttgctcg ccggcctcga
     4981 ccacgcccga ctcggcgcca tcctgttcat cgacggcgac ggtcagcatc cgaccgcgct
     5041 gatcgggacg atggtccgcc actggctcga tgacggctat gacgtggtct acaccgccaa
     5101 ggaagatcgg gcgaacgaac cgctgacgcg gcgcctcgga gtgaagtcgt tctatctgct
     5161 cctcaactgg ggggcgcgaa cgaagatccc ggaagacgcc ggcgatttcc gcctgttgtc
     5221 gccgcgcgcg gcgactgcgt tgcgcgcgct gccggagcgc aaccgcttct tcaagggact
     5281 gtcgagctgg atcggctttc gccagatccg catcgactac cagccggagc cccgcgccga
     5341 cggccgcagt acctggaatc tgcggtcact catcggcttg tcgatcgacg gattgaccgg
     5401 cttttcggtg gcgccgctgc gcttcgccac catgctcggc ctgctgctgg cgctgaccgc
     5461 gttcctctac ggcgcggaaa tcctctatga gacctgggtc tacggcgcaa agattcccgg
     5521 ctatccgtcg ctcttcgtcg gcgtcatggt gctcggcggc gtgcaactca tcatgctcgg
     5581 cgtggtcggc gaatatatcg gcaagattct ctacgagatc aaaggacggc cggtctactt
     5641 cgtgtccgag catgcggtca aactgcgcga ggaagcgggc cgccccgaga gcgacgcccg
     5701 caccgcggct gaatagcgag cccatcaccc cgctggtggc ggaacagcgt tacatcacca
     5761 cgaccttggt gccgactttc acgcgatcgt agagatcggt gacgtcgtcg ttacgcatgc
     5821 ggatgcagcc cgaggaaacc tgcgagccga tgctccacgg ctcgttcgag ccgtggatgc
     5881 ggtagagcgt cgagccgaga tagagcgcgc gggcgccgag cggattttcc ggaccgccag
     5941 ccatgtagcg cgggaggtcc gggcggcgct cgatcatctc gtcgggcggt cgccagtccg
     6001 gccattcgcg catcgccgtg accgtcttca cgccggccca ggtgaaaccc ggacg
//
LOCUS       DATMQB010000126         3125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_967537, whole genome shotgun sequence.
ACCESSION   DATMQB010000126 DATMQB010000000
VERSION     DATMQB010000126.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3125
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_967537"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1952
                     /gene="carB"
                     /locus_tag="VNY79_04030"
     CDS             <1..1952
                     /gene="carB"
                     /locus_tag="VNY79_04030"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HWX71649.1"
                     /translation="WFLAQVRGIVETEAEIREKGLPAAAPVLRRLKAMGFSDARLARL
                     VGLGAEEVSARRRQLGVRPVFKRIDTCAGEFASPTAYMYSTYEAPFVGRAADEAAPSD
                     RKKVVILGGGPNRIGQGIEFDYCCCHAAFALKEVGFETIMVNCNPETVSTDYDTSNRL
                     YFEPLTAEDVMEIIDTERRSGELHGVIVQFGGQTPLKLAEPLAEAKVPILGTSPDAID
                     LAEDRDRFKRLLDKLGLRQPKSGIATSPERARAIAHEIGFPIVIRPSYVLGGRAMEIV
                     HDAVQLDRYVARLAADLDRPSEFAVSDKRPLLIDRYLTDAVEVDVDCLADGRDTYIAG
                     IMEHIEEAGIHSGDSACSLPPHDLSAAAIAELDRQTRALALALKVGGLMNVQYAIKDG
                     AIYVLEVNPRASRTVPFVAKVTGVPAAKIAARIMAGESLKSFALKPQRFELGTATHVG
                     VKEAVFPFARFGDKVDTVLGPEMKSTGEVMGIDRDYNVAFAKSQLGGGTRLPKSGTVF
                     VSVKDADKPRILETVRLLAGLGFKVLATSGTQRYLAGEGVAAIKVNKVAEGRPHIVDA
                     IKNGEVHLVFNTTEGATALADSRSLRRAALLHKVPYYTTLSGAVAAAQGIKAYLGGDL
                     EVCALQSYFAAASDPASERPQRRHV"
     gene            2031..2504
                     /gene="greA"
                     /locus_tag="VNY79_04035"
     CDS             2031..2504
                     /gene="greA"
                     /locus_tag="VNY79_04035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0070063 - RNA polymerase binding [Evidence
                     IEA];
                     GO_process: GO:0032784 - regulation of DNA-templated
                     transcription elongation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HWX71650.1"
                     /translation="MEKIPMTAEGYSALEAELKHCQQVERPRIIQQITDARTHGDLSE
                     NAEYHAAKESQSLNEGRIAELEDKLARAEVIDVSKLSGDTITFGATVTLIDEDTDKKA
                     VWQLVGEPEADAKKGKISITSPLARALVGKKKGVQVEVVTPGGAKAYEIVKVEWK"
     gene            2736..>3125
                     /locus_tag="VNY79_04040"
     CDS             2736..>3125
                     /locus_tag="VNY79_04040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HWX71651.1"
                     /translation="MDEPVTNTTHAKLVIIGSGPAGYTAAIYAARAMLDPILIQGIEP
                     GGQLTITTDVENYPGFADVIQGPWLMEQMEKQAAHVGTKIVTDLVVKLDLAHQPFRLT
                     CDSGDVYLAETVILATGAQARWLGTPSE"
BASE COUNT          548 a         1028 c         1036 g          513 t
ORIGIN      
        1 cgtggttcct ggcacaagtg cgcggcatcg tggaaacgga agcggagatc cgcgaaaagg
       61 gcctgccggc ggcggcgccg gtgctgcgcc ggctcaaggc catgggtttt tccgacgcgc
      121 ggctggcgcg gctcgtgggc ctcggcgccg aggaggtttc ggcgcgccgc cgtcaactcg
      181 gcgtgcggcc ggtgttcaag cgcatcgaca cctgcgccgg cgaattcgcc tcgcccaccg
      241 cctacatgta ttcgacctac gaggcgccgt ttgttggtcg cgcggccgac gaggcggcgc
      301 cgagcgacag aaagaaggtc gtcattctcg gcggcggccc gaaccggatc ggccagggaa
      361 tcgagttcga ctattgctgc tgccacgccg ctttcgcgct caaggaggtc ggcttcgaga
      421 ccatcatggt caactgcaat ccggagacgg tgtcgaccga ctacgacacg tcgaaccggc
      481 tgtacttcga gccgctgacc gccgaggacg tgatggagat catcgatacc gagcgcagaa
      541 gcggcgaact gcacggcgtc atcgtgcagt tcggcggcca gaccccgctt aagcttgccg
      601 agccgctcgc cgaggcgaag gtgccgatcc tcggcacctc gcctgacgcc atcgatctcg
      661 ccgaggaccg cgaccgcttc aagcggctgc tcgacaagct cgggctccgc cagccgaaga
      721 gcggcattgc gacgagcccg gaacgggcgc gcgccatcgc ccacgagatc ggttttccga
      781 tcgtcatccg cccctcctat gtgctcggcg gccgcgccat ggagatcgtg cacgacgcgg
      841 tccagctcga ccgctacgtc gcccgcctcg ccgccgatct cgaccgacct tcggagttcg
      901 cggtctcgga caagcggccg ctgctcatcg accgctatct caccgacgcc gtcgaggtcg
      961 atgtcgattg cctggccgac ggccgcgaca cctacatcgc cgggatcatg gagcacatcg
     1021 aggaggcggg catccattcc ggcgattccg cctgctcgct gccgccgcac gatctctcgg
     1081 cagcggcgat cgccgagctc gaccggcaga cccgcgcgct cgccttggcg ctcaaggtcg
     1141 gcggactgat gaacgtgcag tacgccatca aggacggcgc catctacgtg ctggaagtca
     1201 atccgcgcgc ctcgcgcacc gtgccgttcg tcgccaaggt gacgggcgtg ccggcggcaa
     1261 agatcgcggc gcgcatcatg gccggtgaat cgctcaagag ttttgcgctg aagccgcagc
     1321 gcttcgagct cgggaccgcg acgcatgtcg gcgtcaagga ggcggtgttc ccgttcgcgc
     1381 gcttcggcga caaggtcgat accgtactcg gcccggagat gaaatcgacc ggcgaggtca
     1441 tgggcatcga ccgcgactac aatgtcgcgt tcgccaagag ccagctcggc ggcggcacgc
     1501 ggctgccgaa gagcggcacg gtcttcgtgt cggtcaagga tgccgacaag ccgcgcatcc
     1561 tggagacggt acgcctgctc gcggggctcg gcttcaaggt gctggcgacg tcggggaccc
     1621 agcgctatct cgccggggag ggcgttgccg cgatcaaggt caacaaggtg gcggaggggc
     1681 gcccgcacat cgtcgatgcc atcaagaacg gcgaggtcca cctcgttttc aacaccacgg
     1741 aaggggcgac ggccctcgcc gacagccgtt cgctgcggcg ggcggccctc ttgcataaag
     1801 tgccgtacta caccactctt tcaggggccg tcgccgcagc gcagggtatc aaagcctatc
     1861 tcggggggga cctcgaggtc tgtgcgttgc agtcctattt tgcggccgcc tccgatcccg
     1921 cgtcggagcg gccacagcgg cggcacgtgt agggacaggt tgtggtcgcg tggccgggcg
     1981 acgctccggc ccgcgacctg aattttgcct ctaccgggat tggaggaccg atggaaaaga
     2041 ttcctatgac ggcggagggc tactcggcgc ttgaggccga actcaagcat tgccagcagg
     2101 tcgagcgccc gcgcatcatc cagcagatca ccgacgcgcg tacccacggc gatctctcgg
     2161 agaatgccga ataccacgcg gcgaaggaat cccagtcgct caacgagggg cggatcgccg
     2221 agctggagga caagctcgcg cgcgcggaag tgattgatgt atcgaagctt tccggggata
     2281 ccatcacgtt cggcgcgacc gtcacgctga tcgacgagga caccgacaag aaggcggtgt
     2341 ggcagctcgt cggcgagccc gaggcggacg ccaagaaggg caagatttcc atcacctcgc
     2401 cgctggcgcg ggccctcgtc ggcaagaaga agggcgttca ggtcgaggtg gtcacgccgg
     2461 gcggcgccaa ggcttacgag atcgttaagg tcgagtggaa gtaatttttc cgccggcctg
     2521 acccacgcct atttctcatt tcggcgccat ggggctttgc atatcttgca tggctccggg
     2581 gaatccctat tttcgccctg cgaacagccg caggcgggcc gaatcggggt gttttccggc
     2641 tcagctcgcg gccgcagtca gcaagggcgt gcgtattgcc ttcgggggct ttagggcggg
     2701 ccgatttgcg cggcaaccac ccggcgccgc aaagtatgga tgagccggtg accaatacca
     2761 cccatgccaa gctcgtcatc atcggatcgg gaccggcggg gtacaccgcg gcgatctatg
     2821 cggcgcgcgc catgcttgac cccatcctta tccagggcat cgaacccggc ggccagctca
     2881 ccatcaccac cgacgtcgag aactatccgg gctttgccga cgtcatccag ggcccctggc
     2941 tgatggagca gatggaaaaa caggccgccc atgtcggcac caaaatcgtc accgatctcg
     3001 tcgtcaagct cgatctcgcg catcagccgt tccggctgac ctgcgacagc ggcgacgtct
     3061 atctggccga aacggtcatt ctcgccaccg gcgcgcaggc gcgctggctg ggcacgccgt
     3121 cggaa
//
LOCUS       DATMQB010000127         5114 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3756531, whole genome shotgun sequence.
ACCESSION   DATMQB010000127 DATMQB010000000
VERSION     DATMQB010000127.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5114)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5114)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5114
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3756531"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1063
                     /locus_tag="VNY79_04045"
     CDS             <1..1063
                     /locus_tag="VNY79_04045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HWX71652.1"
                     /translation="SVSGLKQTIIRSGLEGLYFSGAHRALKRFVGGVGAILTLHHVRP
                     SRPDRFQPNRLLEITPAFFARVIRSLRRSRVDLVSLDEMHRRLTEADFSRRFVCVTFD
                     DGYRDTLEWAYPILKEAEVPFAVYVATSFPDRLGELWWLALEAVIARNNRIGLEVDGR
                     NRTFDCADVADKRALFNELYWWLRRRRTETEVRRIVRDLAACYQVDIAGFCNDLCMSW
                     AELSELAADPLVTIGAHTVNHPMLAKLPADAVRAEMDLSRSVIEAALAVRPQHLCYPF
                     GDRSSAGPREFEIASELGFKTAVTTQPGVVFRGHRKTLTALPRLSLNGEYQRLRYVRV
                     LLSGSATAMWNGLRGLEAA"
     gene            complement(1135..1371)
                     /locus_tag="VNY79_04050"
     CDS             complement(1135..1371)
                     /locus_tag="VNY79_04050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2842 domain-containing protein"
                     /protein_id="HWX71653.1"
                     /translation="MSLRLRKFIGAIALLVLVVVWALVAMALAQAPAIRENALAATLY
                     YIIAGLGWVVPAMPLVRWMSRRADDGRRPTDDGR"
     gene            1463..2605
                     /locus_tag="VNY79_04055"
     CDS             1463..2605
                     /locus_tag="VNY79_04055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="COX15/CtaA family protein"
                     /protein_id="HWX71654.1"
                     /translation="MTATLADDFRTRAIRLWLYAVAALVLVMVLVGGATRLTESGLSI
                     TEWQPVTGALPPLSEGQWQAEFQKYQAIPQYRELNRGMSLAEFKTIFWWEWAHRFLGR
                     LIGAAFLFPFLWFLWRGSIASELRPRLWLIFALGALQGAVGWWMVASGLADRVEVSQY
                     RLATHLVLACAIYVALVWTAQRLGEGTSIFPPAPAAWQGGGAARLRASAAGLLGLVLL
                     QIYLGALVAGLRAGYVYNTWPLIDGALVPEGSRLFADAPLWRNFFENTLTVQFDHRML
                     AYAIWLCALAHAIDVGRARRGPAFASAVALLVALTLQAALGIWTLLAAAPLPVALLHQ
                     AMAMLVLTAATMHAASVSRGGRHSGARSNAAAPQSMTEFGERTLGA"
     gene            complement(2674..3954)
                     /locus_tag="VNY79_04060"
     CDS             complement(2674..3954)
                     /locus_tag="VNY79_04060"
                     /EC_number="2.5.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase"
                     /protein_id="HWX71655.1"
                     /translation="MNDRIPGFATLAIHAGAQPDPTTGARATPIYQTTSYVFESVDHA
                     ASLFGLQTFGNIYTRIGNPTNAVLEERVAALEGGTAGLAVGSGHAAQVLVFHCLLQPG
                     DEFVASRKLYGGSINQFNHAFKNFGWNVVWADPDDIGSFERAVSPKTKAIFTESIANP
                     GGVITDMEAVAQIARRAGVPYIVDNTLASPYLCKPIDHGADVVVHSLTKFLGGHGNSI
                     GGLIVDAGTFNWSRERRYPMLCEPRPEYHGIVLHETFGNFAFAIACRVLALRDIGPAL
                     SPFNAFLILTGIETLPLRMRQHCDNALAVAEWIAKHPQVAWVSYPGLAGDRYHNLAKK
                     YCPNGAGAVFTFGLKGGYDAGVKLVSNVKLFSHLANIGDTRSLIIHPASTTHRQLNDA
                     QKVAAGAGPDVVRLSIGIEDKEDIIADLEQGLAD"
     gene            4503..>5114
                     /locus_tag="VNY79_04065"
     CDS             4503..>5114
                     /locus_tag="VNY79_04065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71656.1"
                     /translation="MIRSKIAQLLGRSAGGGAKLVVIAYDHAGHYFHELLGYMTAASV
                     LGISLRIIAAKLVDPAIAAQLHAERAIDSLPHTWGIHPPNVVDQLVAFADEQGDLASL
                     WSALDDCDLGSRDMVLFPISRPLIIVRVGAWIARRASRRRPNVFFRFTGGELIDRPTG
                     QTNSTTALFRLACSDLNRRHGQDRVFLLADTMPLSQMMTRVCCR"
BASE COUNT          845 a         1605 c         1697 g          967 t
ORIGIN      
        1 atcggtgagc gggctcaaac agacgatcat ccgcagcggg ctggaggggc tctacttcag
       61 tggcgcgcat cgcgcgctga agcgttttgt cggcggggtc ggcgccatcc tgacgctgca
      121 ccacgtccgt ccgtcccggc ccgaccggtt ccagccgaac cgcctgctcg agatcacgcc
      181 ggcattcttc gcacgcgtga tccgctcgct gcgccgctcg cgcgtcgacc tcgtcagcct
      241 cgacgagatg caccgccgcc tgaccgaggc cgatttttcc cgccgcttcg tctgcgttac
      301 tttcgacgac ggctaccgcg acacgctgga gtgggcctat ccgatcctca aggaggcgga
      361 ggtgccgttc gcggtctatg tggccacgag ttttcccgac cggctcggcg aactctggtg
      421 gctcgcgctc gaagcggtga tcgcacgcaa caaccgcatc ggccttgagg ttgacggtcg
      481 caaccgcacc ttcgactgcg ccgatgtggc cgacaagcgc gcgctcttca acgagcttta
      541 ttggtggctg cgccgccggc gcaccgagac cgaggtacgg cgcatcgtgc gcgatctcgc
      601 ggcctgctat caggtcgaca tagcggggtt ctgcaacgat ctctgcatga gttgggcgga
      661 gctcagcgag ctcgccgccg acccgctggt gaccatcggc gcccatacgg tcaatcatcc
      721 gatgctggcg aagctgccgg ccgacgccgt gcgcgcggaa atggatctga gccgctcggt
      781 catcgaggcg gcgcttgccg tgcggccgca gcatctgtgt tatccgtttg gcgaccgcag
      841 ctcggccggg ccgcgcgaat tcgagatcgc gtccgagctt ggcttcaaga ccgcagtgac
      901 gacgcagccc ggcgtggtgt ttcgtgggca cagaaaaacc ctgacggcgt tgccgcggct
      961 ctcgctgaac ggcgaatacc agcgcctgcg ctacgtgcgc gtgctgctct cgggttcggc
     1021 gaccgcgatg tggaacggct tgcgcggcct ggaggcggcg tgagcgggtg acagtggacg
     1081 ggcaacgaac gacaagtaaa agtctttcgc ctgtattcac ctgtattcct gcttctatcg
     1141 tccgtcgtcg gtcggccgcc ttccgtcgtc ggccctccgg ctcatccacc gcaccagagg
     1201 catcgccggc acgacccatc cgagtccggc gatgatgtaa tagagcgtgg cggcgagggc
     1261 gttttcgcga atggccggag cctgcgcgag cgccatcgcc accagcgccc acacgacgac
     1321 aagcaccaga agcgcaatgg cgccgatgaa cttgcgcagc ctgagagaca tgggggaggt
     1381 gctatcacag gcgacatcgc gcgtcattgc cgcacggggg agggggttat aaggtgtccg
     1441 cctcctcaat gatcgggcga gaatgaccgc gacacttgcc gatgattttc gcacgcgcgc
     1501 gatccggctg tggctttatg ctgtcgccgc gctcgtgctc gtcatggtgc tcgtcggtgg
     1561 cgcgacgcgg ctgaccgagt cgggcctctc gattaccgag tggcagccgg tgaccggcgc
     1621 gttgccgccg ctcagcgagg ggcaatggca ggccgagttc cagaaatatc aggccattcc
     1681 gcagtaccgc gaactcaacc gcggcatgag cctggctgag ttcaagacca ttttctggtg
     1741 ggaatgggcg caccggttcc ttggccggct gatcggcgcg gcgttcctgt ttccgttcct
     1801 ctggtttctg tggcgcggct cgatcgcaag cgagttgcgg ccgcggctct ggttgatctt
     1861 tgctcttggc gcgctgcaag gcgcggtcgg ctggtggatg gtggcatccg gcctcgccga
     1921 tcgtgtcgag gtctcgcaat atcggctggc aacgcatctc gtgctcgcct gcgcgatcta
     1981 tgtcgcgctg gtgtggacgg cgcagcgcct cggggagggg acgtcgatat ttcctcccgc
     2041 accggcagcg tggcagggag ggggagcagc ccggcttcgc gcgagcgccg ccggcctgct
     2101 gggactcgtg ctcctgcaaa tttatctcgg cgccctcgtc gccggactgc gcgccgggta
     2161 cgtctacaac acatggccgc tgatcgatgg cgccttggtg cccgaagggt cgcggctgtt
     2221 tgccgacgcg ccgctctggc ggaatttctt cgagaacacg ctcactgtcc agttcgacca
     2281 tcggatgctc gcctatgcga tctggttgtg cgcgctcgcg cacgccatcg atgtcgggcg
     2341 cgcgcgaaga gggccagcgt ttgccagcgc cgtcgcatta ttggtggcgc tgacgttgca
     2401 ggcggcgctc ggcatctgga cgctgctcgc cgcagcgccg cttcccgtgg cgttgctgca
     2461 ccaggcgatg gcgatgctgg tcttgaccgc ggcgaccatg cacgcggcga gcgttagccg
     2521 cggcggccgt cattctggcg cccggtcgaa cgcagccgcg ccgcaatcga tgaccgaatt
     2581 cggagaacgg acgctcggcg cgtaaccgcg gagtgccgac cggcgggaaa ttatcgacgc
     2641 cggctcgcgc ccttagccgc gcggcgggtg acttcagtcg gccagccctt gctcgagatc
     2701 ggcgatgatg tcctccttgt cctcgatgcc gatcgacagc cgcaccacgt cggggccggc
     2761 gccggccgcg accttctgcg catcgttgag ctggcggtgg gtggtcgatg ccgggtgaat
     2821 gatcagcgag cgggtgtcgc cgatgttggc gaggtgcgag aacagcttca cgttggagac
     2881 gagcttgacg ccggcgtcgt agccgccctt gaggccgaac gtaaacacgg cgccggctcc
     2941 gttcgggcaa tatttcttgg cgaggttgtg gtagcggtcc cccgccaggc ccggatagct
     3001 cacccaggcc acctgcgggt gcttggcgat ccattcggcg accgcgagcg cattgtcgca
     3061 gtgttggcgc atgcgcagcg gcagcgtctc gatgccggtg aggatgagga aagcattgaa
     3121 cggtgagagc gccggaccga tgtcgcgcag cgccagcacc cggcaggcga tggcaaaggc
     3181 gaaattgccg aacgtctcgt gcaggacgat accgtgatat tccggccgcg gctcgcagag
     3241 catcgggtaa cgccgctcgc gcgaccagtt gaaggtgccg gcatcgacga tgagcccgcc
     3301 gatcgagtta ccgtggccgc cgagaaattt ggtcagcgaa tgcacgacga cgtcggcgcc
     3361 gtgatcgatc ggcttgcaca gatacgggga agcgagcgtg ttgtcgacga tgtagggcac
     3421 gccggcgcgg cgcgcgatct gcgcgaccgc ctccatgtcg gtgatgaccc cgccgggatt
     3481 agcgatcgac tcggtgaaga tcgccttggt cttcgggctc accgctcgct cgaacgagcc
     3541 gatgtcgtcg ggatcggccc acaccacgtt ccagccgaag ttcttgaacg cgtggttgaa
     3601 ctggttgatc gagccgccat agagcttgcg cgacgcgacg aactcatcgc cgggctgcag
     3661 caggcaatga aagaccagca cctgcgccgc gtggccggat ccgaccgcaa gcccggcggt
     3721 gccgccttcg agcgcggcga cgcgctcctc cagcaccgca ttggtcgggt tgccgatgcg
     3781 cgtatagatg ttgccgaagg tctgcagccc gaacagcgag gcggcatggt cgacgctttc
     3841 aaacacgtac gaggtggtct gatagatcgg cgtcgcgcgc gcgccggtcg tgggatcggg
     3901 ctgcgccccg gcgtgaatgg cgagcgtggc gaagcccgga atgcggtcgt tcatcggcca
     3961 atcctcagca tgctgttggg aaaagcgccc atcgccggtt tataggatct aactaagttg
     4021 ttccaggccg ttttgctcca taccgcatta tggtcgccgc gcgagcagcc gctattgacc
     4081 atccaccgca cggtgccgcg gtctggcctg cacagtagcg aacatacggg ccagacggat
     4141 gacccgtgct gactctgatc gcctatgagt gccctacaca ctcagatggc tgcatggctt
     4201 gcacaatcat gagctatgac cagcagcgga attgatgtcg gagcgtggct ccgagaccct
     4261 tgggacgcgg ctggacaaag ccggtggctt tgaccaagct gatgccaggc gcgtaattct
     4321 ggctgagttc tatcggggcg gcgaatgccg gcccgataga aacatccggg gcgggtgcgg
     4381 gggcgaaact ccgacagtcg acgtatccgc aaggcgcttg gctgggctcc atccaaatca
     4441 ctccgtagag gattggagcg aacctatgcc tggatcgaaa tgcaggtctc gggcaaacga
     4501 caatgatccg ttccaaaatc gcccagctgc tgggccgaag tgccggaggc ggcgctaagc
     4561 ttgtggtaat tgcctatgat cacgcaggtc actatttcca tgagcttctg ggttacatga
     4621 ccgcggcgag cgtactcggg atttcgcttc gcatcatagc ggccaagttg gttgacccgg
     4681 cgatagcggc gcaactacac gcggaacgag cgatcgactc gctacctcac acgtggggca
     4741 tccacccgcc gaatgttgtt gatcaactcg tcgccttcgc cgacgaacag ggagacctcg
     4801 cgtcgctttg gtcggcgctg gatgattgtg acctgggctc tcgcgacatg gtgttgttcc
     4861 ccatcagtcg ccctctcatc attgtccgcg taggcgcgtg gattgcgcgt cgcgcatcgc
     4921 gccgacggcc caatgtcttc ttccgcttca ccggcggcga actaattgac aggccgacag
     4981 ggcagaccaa ctccacaact gccctttttc ggttggcttg ctccgacctt aacaggcggc
     5041 acggacagga ccgtgtcttt ctgctcgccg acactatgcc acttagtcaa atgatgacgc
     5101 gcgtttgctg tcga
//
LOCUS       DATMQB010000128        13407 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1896651, whole genome shotgun sequence.
ACCESSION   DATMQB010000128 DATMQB010000000
VERSION     DATMQB010000128.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 13407)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13407)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13407
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1896651"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            247..1473
                     /locus_tag="VNY79_04070"
     CDS             247..1473
                     /locus_tag="VNY79_04070"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HWX71657.1"
                     /translation="MGTTPAGAEGGKKDALAGIDQALRRAAEAKEVPGVVAVAATGDG
                     VLYEGAFGKRDLAKGTDMTIDSVFWIASMTKALTATAAMQLVEQGKLKLDEPMGKLLP
                     ELAAPQVLEGFNDKGEPKLRPAKRPITLRQLLTHTAGFTYDFWDANTAQYVKVANLPG
                     IITCKNAALTTPLAFDPGDRWEYGINIDFAGKAVEAVSGQNLAVYLREHLFQPLGMKD
                     TGFVIRPDQKARLVSVHARKPDGGLDPIEFGIPQEPEFFMGGGGLYGTGRDYLAFLQM
                     LMNGGELNGARILRPETVAQMSKNNIGDINISKVVLKTTAPTATPDVDMGQLFPGQDV
                     KWGLSFLINPQQGPAGRSGGSLSWAGLANTYFWIDPSKRVAGVILTQILPFVDPAVMK
                     IYGQFESGVYKAVSSA"
     gene            complement(1525..2397)
                     /locus_tag="VNY79_04075"
     CDS             complement(1525..2397)
                     /locus_tag="VNY79_04075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018317965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1932 domain-containing protein"
                     /protein_id="HWX71658.1"
                     /translation="MAPVVAVIAAGAMGAAVGQRLADLGVTVLTSLAARSEATAARAA
                     AAGMSAASDAEIAAADFVLSILPPGDALALAQHFVPALSASNVKPIYVECNAVNPATV
                     ERIASTIAPTGCAFVDAGIVGGPPKPSQKGQGRHAGPRFYASGEAAPRFAALRQYGLD
                     VRVLDGPLGAASALKMSYAGITKGTQALGAAMLLAAARAGSAAALHEELQFSQPEMLA
                     WLQHFLPAMPAKAYRWIAEMQEIAGFVGDDPAAGELFAGAAHFYERIAEDFAADGKDV
                     ESLLRLVGSDSTKR"
     gene            2720..3955
                     /gene="chrA"
                     /locus_tag="VNY79_04080"
     CDS             2720..3955
                     /gene="chrA"
                     /locus_tag="VNY79_04080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate efflux transporter"
                     /protein_id="HWX71659.1"
                     /translation="MSGGAEPTPKTAIRGGAAGEVLAAFLRLGLTSFGGPIAHLGYFH
                     DEFVVRRRWLDEKTYVDLVALSQFLPGPASTKVGIAIGLSRAGYLGAFAAWAGFTLPS
                     ALLLVLFGYGVASFGDALRSGWLHGLMVAAVAVVAQAVLLMMRALAPDRTRATLAVAA
                     AAVVLAVPSSLGQIGAIVLGGIAGFVFLRGTTPEGHVSLPHPVSRPVAMAAIAVFFGL
                     LIGLPLLAAAAPNHVLRLFDVFYRAGSLVFGGGHVVLPLLQAAVVPPGWVGNDAFLAG
                     YGAAQAVPGPLFTFSAYLGTVMAPPPNGWAGAILCLIAMFLPAFLLVIGPLPFWDDLR
                     RRTWAQAMLRGVNAAVVGLLLAALYRPVWTSAITSPSDFALGIGAFLLLFMWKTPPWL
                     VVAFCAIGGQALTLFPFGG"
     gene            complement(3996..4613)
                     /locus_tag="VNY79_04085"
     CDS             complement(3996..4613)
                     /locus_tag="VNY79_04085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015821219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB-like protein"
                     /protein_id="HWX71660.1"
                     /translation="MTVRDPVLTPVAVGELRPTQITVGMREVQAKRKRWREMGKKGSE
                     FLGKHMIPVILGPKLRHYVIDHHHLARALHDEGVKSVAVTVIANLSRLDRDAFWTVMD
                     NRNWMHPFDADGRRRPYGNIPKSVSDLLDDPFRSLAGELRRAGGFAKDTTPFSEFLWA
                     DFLRRRIKRKLVEDDFSHAIERALQLARSADAGYLPGWCGPVPEG"
     gene            complement(4788..6203)
                     /locus_tag="VNY79_04090"
     CDS             complement(4788..6203)
                     /locus_tag="VNY79_04090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71661.1"
                     /translation="MSTVVGICIALLALALGLILLAEGREVTALFDTFRSMPLMFQVA
                     WEVIAFVSLALVLSAVWLSYQLVFQRRAAQSLASRLLGVRDSVRGLIKTQVDTEAGVH
                     QLARTDPEDAMAAIQARLTEAERFAQVQRTRNETVDLQSRVDYIRAQQRVLKDRLGPV
                     LEKRRGIEQIFMELHAHQNDLERTLDELASADDAVALDISLKNMIEFVKRSHGRCDDI
                     ERALKIASGLKEEYAELRNRLVPLAAAESGIASRVEELGEARDRLTGEFDVLQQTPEG
                     PLSQRVQQFLDDKKSLDRRLAEMTEDFAKLATLRRDVGALFAGFNRALHGLALSTRGE
                     GVQATDAGVNELNEFVTATQAQLDDIERRLVTFRQLRTRLGEVQARLVPLESDEGGVI
                     SAIEELKDVRDRLATKISRMEQSEEGSLSERVHKFTESRRQLEERVLHLNEEFLKLTL
                     IRKDISNLFERLSNAVSTSAK"
     gene            6360..7406
                     /locus_tag="VNY79_04095"
     CDS             6360..7406
                     /locus_tag="VNY79_04095"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: protein motif:HMM:NF013670.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HWX71662.1"
                     /translation="MSWLRLVAAVPLIAISILGAGSLAARGEDRPPLAAKPAAGCPRS
                     AFRVVVDVGHTLEVPGAISARGVPEYAFNLQLANDIKRALVDAGFDKTVVLITAAAPP
                     RGLVERALRANAMRADLFLSIHHDSVPDNLLETWEYAGHESHFSDRFQGYSIFVSKDN
                     GDRNGSLGFGRLLGKELQAHGLGYTPHYTLALMGRHRRELVDAEAGVYRFDQLVVLRG
                     TRMPAVLFEAGSIINRQEEAEMASPERRSFISAAAAAAIEDFCAARSHPLGERPQQRR
                     ARGAAAAAARSAAYGDAPRPPRSHRLHAITRSPKKRRASGIKRAIGRSGSSESCFGFE
                     ETDHERIRSPRQRQ"
     gene            7372..8330
                     /locus_tag="VNY79_04100"
                     /pseudo
     CDS             7372..8330
                     /locus_tag="VNY79_04100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007608106.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
     gene            8344..8715
                     /locus_tag="VNY79_04105"
     CDS             8344..8715
                     /locus_tag="VNY79_04105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin family copper-binding protein"
                     /protein_id="HWX71663.1"
                     /translation="MLTRISSSVVAAVLGAAVATATAIVLPGRADDAPHAVTVDNFTF
                     NPQRLTIKAGSIVTWTNKDDIPHAIASVSALFRSKALDTDDNYSFTFTSPGTYQYFCS
                     LHPHMTGTIVVEAATGSDAAH"
     gene            8775..9329
                     /locus_tag="VNY79_04110"
     CDS             8775..9329
                     /locus_tag="VNY79_04110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-70 family RNA polymerase sigma factor"
                     /protein_id="HWX71664.1"
                     /translation="MAAASDEDKARRFRDAALPFLDDVFTLARYLMRNETDAEDAVQE
                     CYLRALRHFDSYRGPAIKPWLLAILRNVCKAEFARRSAVPASSEGRDDDRVEDPPAIW
                     QGPQPSPEAELLQRSDGQRIRRLVAELPQPFREAVVLRDINNLSYREIVDVAGIPLGT
                     VMSRLARARSMLRAAWNGEEGSTT"
     gene            9326..10141
                     /locus_tag="VNY79_04115"
     CDS             9326..10141
                     /locus_tag="VNY79_04115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma factor"
                     /protein_id="HWX71665.1"
                     /translation="MNCAESEVLIHALIDGELDAGHAREVEAHVATCRGCADKLGAFR
                     AMRAAITAAELKEKAPTHLRRRVEAALTSPPTEAAGAAGRLGAWLTIARASRRNFLGG
                     FALGTAVSAAVAASVVITVLGAGEDRRIAGEIVSAHLRSLQGSHLTDVETSDQHTVKP
                     WFNGKLALSPPVVDLTAQGFTLIGGRLDYVDGEAMAAIVYKRRKHLINLFVGPRLGGA
                     PRGAKTAMVQGFNVYHWAQDGLGFWAASDINADELAEFGRHIADTKRPPSARP"
     gene            10252..11370
                     /locus_tag="VNY79_04120"
     CDS             10252..11370
                     /locus_tag="VNY79_04120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018899567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HWX71666.1"
                     /translation="MDQRVDNERRLETAPGREAKPAVGQARPDGPWLERLRARRRMVL
                     ILTALVIVAVAATVFWWVNSVAYESTDDAFIDARTVPVSAQISAAIVDVPVTDNQLVE
                     AGAVLLRLDDRDYRAQADQAKAQMSQAQASITSVEAQVAAQQARIEQAEKQTAQAQAA
                     LTFAKQEDDRYQRLVKTGAVTVEQAQQYTSNFLQVQASFAAAERNESATRMQLPVLQA
                     QRTQAEAQVEQARAALEQAETNLSRTTITAPVAGRIARLTAAKGVYAAVGQALIMFVP
                     REVWVTANFKETQLRSVRPGDSVTIKIDAFPHHKFKGHVDSIQAGSGTAFSLLPAENA
                     TGNYVKIVQRVPVKIVFDEQPDILLGPGMSVVPTVRVR"
     gene            11367..12977
                     /locus_tag="VNY79_04125"
     CDS             11367..12977
                     /locus_tag="VNY79_04125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HWX71667.1"
                     /translation="MNDQRHYSGRESRSAAGDRSPWLIAIVVSIATFMVVLDTAIANV
                     SLRYIAGSLAISVDESTWVVTTYLIANAVVLPISGWLSNVIGRKRFYMLCVAVFTFAS
                     LLCGLAGSLSALLLFRILQGIGGGGMPTSEQAMLADTFPPEKRPQAFALYGIAVIVAP
                     TVGPTIGGWITDNYSWHWIFFINVPIGLISLALVQWLVVEPEVLERERRERLADGFKI
                     DWQGFVLIAMTFGSLEVVLDRGQIEDWFHSTYIITFATIALCSFLFFIPWELTHSDPI
                     VDIRLLCRRQFGMAFLVMMAVGAILFGSNQITPQLMQTNFPYTAMLSGFAVMPGGLAM
                     LIMMPIAGQVTGLMQPKYWMAIGLATIALAMWYSTSLTPDASFGYFVTMRIFQTIGLP
                     FLFIPINSVSYDGLPQQKTSEGSALMNVARNLGGSFGVSLANTELLQRSQFHQARLAE
                     NVVPSSPAYQSIVKQITEFFAHTGSPANAAGRAMGYIGHMIESQAAILAYIDIFYSWA
                     IFAACLIPVVLLLIRRVRRGAAEATAMH"
BASE COUNT         2265 a         4483 c         4339 g         2320 t
ORIGIN      
        1 ttgcgacaac ggcaaagcgg gcgcatagtt atgcgcggcg gcagagcgtt ggctaggaca
       61 tcgcgcatta tcgcggccag cctgttttcc tggccgaaag agtgcccggg atggtcgtcg
      121 ctcgcgaacg ccgacaataa atatccaata tcttgggagg gaatactcat gacccgaatg
      181 cttcagaatc gccgtgagct cttgaaatcg gccgccgcga tctccgccgc ggcctcgttc
      241 gccacgatcg gtacgacgcc cgctggcgcc gaaggcggca agaaggatgc gctcgccggc
      301 atcgatcagg ccttgcgccg cgccgcggag gccaaggagg tccctggcgt cgtcgcggtg
      361 gcggcgaccg gcgacggcgt cctctatgag ggcgccttcg gcaagcgcga cctcgccaag
      421 ggcaccgaca tgacgatcga ttcggtgttc tggatcgcgt cgatgaccaa ggcgctcact
      481 gcgaccgccg ccatgcagct cgtggagcag ggcaaactca aactggacga gccgatgggc
      541 aagctccttc ccgaacttgc ggctccgcag gtcctggaag gattcaacga caagggcgaa
      601 ccgaagctgc ggccggccaa gcggccgatc acgctgcgcc agctgctgac tcacactgct
      661 ggtttcactt acgacttctg ggatgccaac accgcgcaat acgtgaaagt tgccaatctt
      721 ccgggcatca tcacttgcaa gaatgcggcg cttacgacac cgctggcatt cgatccgggc
      781 gatcggtggg aatacggcat caacatcgac ttcgccggca aggcggtcga ggcggtcagc
      841 gggcagaacc tcgccgttta tttgcgcgag cacctgttcc agccgctggg tatgaaagac
      901 accggcttcg tcatcaggcc ggatcagaaa gcgcggctgg tcagcgtgca cgcgcgaaag
      961 ccggatggcg ggcttgatcc gattgagttc ggaattcccc aagaaccaga gttcttcatg
     1021 ggcggcggcg ggctctacgg cactgggcgc gactacctcg ccttcctgca gatgctgatg
     1081 aatggtggcg agctcaacgg tgcaagaatc ctgcgtcccg aaacggtggc gcagatgtcc
     1141 aagaacaaca tcggcgacat caacatctca aaggttgtct tgaagactac tgcaccgacg
     1201 gcgacaccgg acgttgatat ggggcagcta ttccctgggc aggatgtcaa atggggattg
     1261 agcttcctga tcaacccgca gcagggtccc gcgggccgca gcggcggcag cctgtcctgg
     1321 gccgggctgg ccaataccta cttctggatc gatccgtcga agcgcgtcgc cggcgtcatc
     1381 ctcacgcaga tcctgccgtt cgtggatcct gctgtcatga agatctacgg ccagttcgag
     1441 agcggcgtgt acaaggcggt gtcgtcggcc tgattgcttc gccgcccttg cctcgcccgc
     1501 cgccgcaagc gggcgtggtc aagatcagcg tttcgtggag tcgctgccga cgagcctcag
     1561 cagcgactcc acgtctttcc catccgcggc aaaatcctcg gcgatgcgct cgtagaagtg
     1621 cgccgcgccg gcaaagagtt cgcccgcggc gggatcgtcg ccgacgaagc cggcgatctc
     1681 ctgcatttcc gcgatccatc ggtaggcttt cgccggcatg gccggcagga aatgctgcag
     1741 ccaggcaagc atctccggct ggctgaactg cagttcctcg tgcagcgcgg cggccgaccc
     1801 ggcgcgcgcc gcagcgagca gcatcgctgc gccaagggcc tgtgtgccct tggtgatgcc
     1861 ggcataggac atcttgagtg ccgaggcggc gccgagcggc ccgtcgagca cgcgcacgtc
     1921 gaggccgtac tggcgcaacg ccgcgaaacg cggcgccgct tcgcccgacg catagaaacg
     1981 cggacctgcg tgccttccct gccccttttg cgacggcttt ggcggcccgc caacgatccc
     2041 ggcatcgacg aaggcgcagc cggtcggcgc aatagtggaa gcgatgcgct caaccgtcgc
     2101 cggattgacg gcattgcatt cgacataaat cggcttgacg ttgctggcgc tgagcgccgg
     2161 cacgaaatgc tgcgccagcg ccaacgcgtc gcccggcggc agaatggaca gaacgaaatc
     2221 ggccgcggcg atctccgcat cgcttgccgc tgacattccg gcggcggccg cccgcgcggc
     2281 cgtcgcttcg ctgcgggcgg cgagcgaggt cagcaccgtc acgccgagat cggcgagtct
     2341 ttgcccgacc gccgcgccca ttgcgcccgc cgcgattact gcaacaaccg gagccatgat
     2401 gtcctcgatc tgcaacgagc gaggatgcta gcagttcaga tcgggacgga acatgcagcc
     2461 ggaccaagtc tgcgcgcccc cgcaattgcg gcagcgcaga ttcgccctcc ctcgcgggag
     2521 aaggcagttc agaagctccg ccatcatggc ccaacgggtc gttcgcctgc ttgaaaatga
     2581 tcaatgtcga agtgaaccgt ttcttttgct tatagcgacc gctaaaagcc gctcctttac
     2641 cggcgcaaag tccctgagta ttttcacgca attgcgccga tctccttgaa accgggcggg
     2701 caacggaaac aaagaccgca tgagcggcgg agcagagccg acgccaaaga cagctatccg
     2761 cggcggcgcc gcgggcgagg tcctcgccgc cttcctgcgg ctcggcctga cgagcttcgg
     2821 cggcccgatc gcgcatcttg gctatttcca cgacgaattc gtcgtccgcc gccgctggct
     2881 cgacgagaag acctatgtcg acctcgtggc gctttcgcag ttcctgccgg gaccggcgag
     2941 caccaaggtc ggcatcgcca tcggcctgtc gcgcgcgggc tatcttggag cgttcgcggc
     3001 atgggcgggc ttcacgctgc cctcggcgct cctgctcgtg ctgttcggct acggcgtcgc
     3061 ttccttcggc gacgcgttgc gcagcggctg gctgcacggt ctcatggtgg ccgccgtcgc
     3121 agtcgtggcg caggccgtcc tgttgatgat gcgcgcgctc gcacccgacc gcacgcgagc
     3181 gacgctcgcc gtggccgctg ccgcggtggt gctggccgta ccgtcatcct taggccagat
     3241 cggcgccatc gttctcggcg gcatcgccgg cttcgtcttc ctgcgcggga ccacgcccga
     3301 agggcacgtc agcctgccgc acccggtgag ccggcccgtg gcgatggcgg cgatcgccgt
     3361 gttcttcggc ctgctgatcg gcttgccgct cctggccgcc gccgcgccga accacgttct
     3421 gcgcctgttc gacgtgttct atcgcgccgg atccctggtg ttcggcggcg gccacgtggt
     3481 gcttcctttg ctgcaggccg cggtcgtgcc gccgggctgg gtcggcaacg acgcttttct
     3541 cgccggctat ggcgccgcgc aggcagtacc cggcccgctg ttcacgttct ccgcctatct
     3601 cggcaccgtg atggcgccgc cgccgaacgg atgggccgga gcgatcctct gtctcatcgc
     3661 catgttcctg ccggccttcc tgctggtcat cggcccgttg ccgttctggg acgacctgcg
     3721 ccggcggacc tgggcgcagg cgatgctgcg cggcgtcaac gccgccgtgg tcggcttgct
     3781 gcttgccgct ctctatcgtc cggtgtggac gtcggccatc accagtccca gcgatttcgc
     3841 gctcggcatt ggcgccttcc tgctgctgtt catgtggaag actccgccat ggctcgtcgt
     3901 cgccttctgc gcgatcggag ggcaggcgct cacgttgttt ccattcggcg ggtgaagtga
     3961 acggtgcggc gccgcggccg gcgaaacgga gagaatcagc cctccggcac tgggccgcac
     4021 catccgggca ggtagccggc gtcggcgctg cgtgccaatt gcagcgccct ctcgatcgcg
     4081 tggctgaagt cgtcttcgac cagtttgcgc ttgatgcgtc ggcgcaaaaa gtcggcccag
     4141 aggaattcgc tgaacggcgt cgtgtccttg gcgaagccgc cggcgcgccg cagttcgccg
     4201 gcgagcgagc ggaacggatc gtcgagcaga tcgctcaccg acttggggat gttgccataa
     4261 gggcggcggc ggccgtcggc gtcgaacggg tgcatccaat ttcggttgtc catcacggtc
     4321 cagaacgcgt cccgatcgag cctgctgaga ttggcgatga ccgtcactgc cacgctcttg
     4381 acgccctcgt catggagagc gcgcgcgaga tggtgatgat cgatgacgta gtgccgaagc
     4441 ttcgggccga gaatcaccgg aatcatgtgc ttgccgagaa actcgctgcc cttcttgccc
     4501 atctcccgcc agcgtttgcg cttcgcctga acttcgcgca tgccgacggt aatctgggtt
     4561 gggcgcagtt cgccaacggc gacgggcgtc agtacggggt cgcgaaccgt catggtcgga
     4621 tcctcaacaa tgtgtcacga cgaggctcga acgccgcggg cgcgctgtgt cgaagaccat
     4681 ccgccgctcg gccggaaatg tgctggagcg gtgcatcgac tggttcgctg ctccgctccg
     4741 cgcaacgacg gcagcgcatc ggcaaactcg cgccagaaac gaaacagcta cttcgcggag
     4801 gtgctcacgg cattgctcag ccgctcgaag aggttcgaga tgtccttgcg gatcaaggtc
     4861 agcttgagga attcctcgtt caggtgcaac acccgttctt ccagctgccg cctcgactcg
     4921 gtgaacttgt gcacccgttc ggagaggctg ccttcctcgc tctgctccat gcggctgatc
     4981 ttggtcgcga gccggtcgcg gacatccttg agctcctcga tggcgctgat cacgccgccc
     5041 tcgtccgatt cgagcggaac gaggcgcgcc tgcacctcgc cgagccgggt ccgcaactgc
     5101 cggaaggtca ccaatcggcg ttcgatatcg tcgagctgag cctgcgtggc ggtgacgaat
     5161 tcattgagct cgttgacacc cgcatcggtg gcctgcacgc cttcgccgcg cgtggaaagc
     5221 gcaaggccgt gcagcgcacg gttgaagccg gcgaagagcg cgccgacatc gcggcgcaac
     5281 gtcgccagct tggcaaagtc ctcggtcatc tccgccaggc ggcggtcgag cgacttcttg
     5341 tcgtcgagga attgctgcac gcgctgagag agcggcccct ccggcgtctg ctgcagcacg
     5401 tcgaactccc cggtcaggcg gtcgcgcgct tcgcccagct cctcgacgcg gctggcgatg
     5461 ccgctctccg ccgccgccag cgggacgagg cgattgcgaa gctcggcata ctcctccttc
     5521 aagcccgacg cgatcttcag cgcccgctcg atatcgtcgc aacgcccgtg gctgcgcttg
     5581 acgaactcga tcatgttctt gaggctgata tcgagagcga ccgcgtcgtc ggcgctggcg
     5641 agctcatcga gcgtccgctc gagatcgttc tggtgggcgt gcagctccat gaagatctgc
     5701 tcgatcccgc ggcgtttctc gagcacgggc ccgagccgat ccttcagcac ccgctgctgg
     5761 gcgcggatgt agtcgacgcg ggactgaaga tcgacggtct cgttgcgggt gcgctggacc
     5821 tgcgcaaagc gctcggcctc ggtcaggcgc gcctggatcg cggccatcgc gtcttcgggg
     5881 tcggtgcggg caagctggtg gacgcctgcc tcggtgtcga cctgggtctt gatcaggccc
     5941 cgcacgctgt cgcgcacgcc gagaagccgg gaggccagcg actgcgcggc ccggcgttga
     6001 aacaccagct gatacgagag ccagacggcg gaaaggacaa gcgccagcga tacgaacgcg
     6061 atcacttccc atgccacctg gaacattagc ggcatagagc ggaacgtatc gaacaacgcc
     6121 gtaacctcgc gcccctcggc caacaggatc aatccgagcg caagtgccag tagtgcaatg
     6181 caaattccaa cgaccgtact catccctaag acccgtcgtt cggatttgtt acgacatgag
     6241 cgcggcgcgc acaagggtac gggcgagcgg gcgtagacaa gcccggcgaa cctcgctatg
     6301 gccccgtagg acaaccgaat ccgtgccgcc ttggggggag cacgcgtcat ggacgtgtca
     6361 tgagctggct gcgcctcgtc gcggcggttc ccttgatcgc catctcgatc cttggcgccg
     6421 gctcgctcgc ggcgcgcggc gaagaccgcc cgccgctcgc cgccaagccc gccgccggct
     6481 gcccgcgttc ggcgttccgc gtcgttgtcg atgtcggcca caccctcgag gttcccggcg
     6541 ccatcagcgc acgcggcgtc cccgaatacg cgttcaatct gcaactcgcc aatgacatca
     6601 agcgggcgct cgtcgatgcc ggtttcgaca agaccgtcgt cctgatcacg gccgcggcgc
     6661 cgccgcgggg ccttgtcgag cgcgcgcttc gggccaacgc gatgcgcgcc gatctctttc
     6721 tgtccatcca ccacgattcg gtgccggaca atctcctgga gacgtgggag tacgcgggcc
     6781 acgagagcca tttcagcgac cggttccagg gttattccat cttcgtctcg aaggacaatg
     6841 gcgaccgcaa cggcagtctc ggtttcggcc ggctcctcgg caaggaactg caggcgcacg
     6901 gcttgggata cacgccgcat tacacgctgg ccctgatggg ccggcaccgc cgcgaactgg
     6961 tggacgccga agccggcgtc tatcggttcg atcaattggt ggtgctgcgc gggacccgca
     7021 tgccagccgt gcttttcgaa gccggctcga tcatcaaccg gcaggaggaa gcggaaatgg
     7081 cgagtcccga gcggcggtcg ttcatcagtg ctgccgccgc cgcggcgatc gaagacttct
     7141 gcgcggcccg gtcgcacccg ctcggggagc ggccgcagca gcggcgcgct cggggagcgg
     7201 ccgcagcagc ggcgcgctct gccgcgtacg gcgatgcccc ccgcccccct cgctcccacc
     7261 gccttcacgc gataacacgc tcgccgaaaa aacgtcgggc gtcgggaata aagcgcgcca
     7321 tcggccgatc tggatcctcg gaaagctgct tcggcttcga ggagacagac catgagcgaa
     7381 tacgatcacc gcgacagcgg caatgaggac ggcgggtgcc ggggcgtcag ccggcgcaaa
     7441 gtactggaat gcatgacctg ggccggcacc ggcgtcctgt ggaccgtcgc cggcggcatc
     7501 ccccgctcac tcggcatcat cgacgccgcc gtggcccagg aggcgcgcgg gctaaccttc
     7561 ctgcagatca gcgacagcca tgtcggcttc gacaagccgg ccaaccccaa tgcgctcggc
     7621 accctcgagg aggcggtggg tcgcatcaat gcgctgccgg ccaagccggc gttcatgatc
     7681 cataccggcg acatcagcca tctgtcgaag gtgtcggagt tcgatgacgc cgaccgcatc
     7741 atctcgcaga cgcggctcga cgtgcattac gttcccggcg agcacgattt tctcgacccc
     7801 gaccgcaagc tctacggcga gcgctacggg cgcggcacca agggcgccgg ctggtacagc
     7861 ttcgacgccg gcggcgcgca ctttatcgga cttgtcaacg tggtggatct gagagccggc
     7921 gggctcggca atctcggcag cgagcagctc gaatggctcg aagccgacgt caaggaccgc
     7981 accgcctcga ccccaatcgt cctgttcgcc cacatcccgc tgtgggccgt ctacccgcaa
     8041 tggggctggg gcaccgaggc gcccgcgcgc tcgaatatct caagcgcttc ggctcggtga
     8101 ccgtgctcaa cggccacatc caccaggtga tgcagaaggt tgaaggcaac gtcaccttcc
     8161 acaccgcccg ctcgaccgca tttccgcagc cggcgccggg aacggcgcaa tcgccggggc
     8221 ccctcaaggt cgccgacgac aagctgcgca gcttgctcgg catcgccacg gtcaacttca
     8281 agcagggcga ccagcggctc gcgatcgtcg ataccccgct gcagggctga ggaggcagaa
     8341 ccgatgctaa cgaggatcag cagctccgtc gtcgccgccg ttctcggcgc cgccgtggcg
     8401 acggcgacgg caatcgtgct gcccggccgg gcggacgatg cgcctcacgc cgtgaccgtc
     8461 gacaatttca ccttcaatcc gcagcggttg acgataaagg ccggcagcat tgtcacctgg
     8521 accaacaagg acgacattcc gcacgcgatc gcgtccgtca gcgcgctgtt cagatcgaag
     8581 gcactcgaca ccgacgacaa ctattcattc accttcacct cgccgggaac gtaccaatac
     8641 ttctgctccc tgcatccgca catgacgggc acgatcgtgg tagaagcggc taccggcagc
     8701 gacgcggcgc actgatgctc gatcggccgc aaccgcgagc gttggccgca ccgcgggttt
     8761 ccgggcacta ttacatggcg gctgcaagcg atgaggacaa agcgcggcgc tttcgcgacg
     8821 ccgcgctgcc ctttctcgac gacgtgttca cgctcgcgcg ctacctcatg cgcaacgaga
     8881 ccgacgccga ggacgcggtg caggaatgct acctgcgggc cttgcgccac ttcgacagtt
     8941 atcgcggccc ggcgatcaag ccgtggttgc tggcgatcct gcgcaatgtg tgcaaggcgg
     9001 agttcgcgcg gcgaagcgcc gtgccggcgt cgtccgaagg cagggacgat gaccgggttg
     9061 aggacccgcc agcgatctgg caggggccgc agccgtcgcc cgaagcggaa ttgctacaac
     9121 gcagtgacgg gcaaagaatc cgccggctcg ttgccgaatt gccgcagccg ttccgcgagg
     9181 ccgtcgtgct gcgggacatc aacaatctgt cctatcgcga gatcgtcgac gtggccggca
     9241 ttcccctcgg cacggtgatg tcgcggctcg cccgcgcccg gtccatgctg cgcgcggctt
     9301 ggaacggcga agaaggatcg acgacatgaa ctgcgccgaa tccgaagtgc ttattcatgc
     9361 gctgatcgac ggcgagctcg acgccggcca cgcacgcgag gtcgaggcgc atgtggcgac
     9421 gtgccgcggt tgcgccgaca agctcggggc ctttcgtgcg atgcgcgctg ccatcactgc
     9481 cgccgagctg aaagagaagg cgccgaccca tctgcgccgc cgcgtcgagg cggccctgac
     9541 ttcgccgccg accgaggcgg ccggcgcagc cggccgcctc ggcgcctggc ttaccatcgc
     9601 acgcgcgtcg cggcgcaact tcctgggcgg cttcgcgctt ggcaccgcgg tctcggcggc
     9661 ggtggcggcg agcgtggtca tcacagtcct cggtgccggg gaggaccgca gaatcgccgg
     9721 cgagatcgtg tcggcacatc tgcgctcctt gcagggcagc cacctcaccg atgtcgaaac
     9781 gagcgaccag cacaccgtca agccctggtt caacggcaag ctcgccctgt caccgccggt
     9841 ggtcgacctg acggcgcagg gctttacgct gatcggtggc cgtctcgact atgttgatgg
     9901 cgaggcaatg gcggcgatcg tctataagcg ccgtaaacat ctgataaatc tgtttgtcgg
     9961 gccgcgcctg ggtggcgcgc cgcgcggtgc aaagacggcg atggttcaag gctttaacgt
    10021 ctaccattgg gcgcaggacg gcctcggctt ctgggcggcc agcgacatta acgccgacga
    10081 actcgccgaa ttcggccggc acattgccga cacgaaacgg cccccctccg ctcgtccgtg
    10141 actggcctca ggcggcgtta gcggctagaa atcgccagga ttcgcgcttg ccgctggcgg
    10201 cccgtttgcg ggccggcgga aactcatttt gcgccggacg tttaacctat tatggaccag
    10261 cgtgtcgaca atgagcgtcg cctggaaacc gcgccgggcc gagaagcgaa gcccgcggtc
    10321 ggccaagcgc ggccggatgg cccgtggctc gagcggctgc gcgcacgccg acgcatggtg
    10381 ctgatcctaa cggcattggt catcgttgca gtggccgcga ccgtcttctg gtgggtcaac
    10441 tccgttgcct acgagtcgac cgacgacgct ttcatcgacg cacgcaccgt gccggtcagc
    10501 gcccagatca gcgccgccat cgtcgatgtg ccggtgacgg acaaccagct ggtcgaggcg
    10561 ggagcggtgc tgttgcggct cgacgaccgc gactatcggg ctcaggccga tcaggccaag
    10621 gcgcagatga gccaggcgca ggcgagcatc accagcgtcg aagctcaggt cgcggcgcag
    10681 caggcgcgca tcgagcaggc cgagaagcag accgcgcagg cgcaggcggc gctcactttc
    10741 gcgaagcagg aagacgaccg ttaccagcgg ctggtcaaga ccggcgcggt cacggtcgag
    10801 caggcgcagc aatacacctc gaatttcctt caggtccagg ccagcttcgc cgccgccgag
    10861 cgcaacgaaa gtgcgacccg catgcagctc ccggtactcc aggcgcagcg gacgcaggcc
    10921 gaggcgcagg tggaacaggc gcgcgccgcg ctggagcagg cggagaccaa tctgtcgcgc
    10981 acgaccatca ccgcgccagt cgccggccgg atcgcacgat tgaccgcagc caaaggcgtc
    11041 tacgccgcgg tcggccaagc gctgatcatg ttcgtgccgc gcgaggtctg ggtcaccgcc
    11101 aatttcaagg agacgcagct gcgctcggtc cgtcccggcg actcggtgac gatcaagatc
    11161 gacgcctttc cgcaccacaa gttcaaaggc cacgtcgaca gcatccaggc gggcagcggc
    11221 accgccttca gcctgctgcc ggcggaaaac gcgaccggca actacgtcaa gatcgtccag
    11281 cgcgtgccgg tcaagatcgt tttcgacgag cagcccgaca tcctgctcgg ccccggcatg
    11341 tcggtcgtcc cgaccgtcag ggtgcgatga acgatcagcg gcactactct ggccgcgaga
    11401 gccgctcggc cgcgggcgat cgcagtccgt ggctcatcgc catcgtcgtc tccattgcca
    11461 ccttcatggt cgtgctcgat acggcgatcg ccaatgtgtc gttgcgctac atcgccggca
    11521 gcctggcgat cagcgtcgac gagagcacct gggtggtcac cacctacctc atcgccaacg
    11581 ctgtcgttct gccgatcagc ggctggctct ccaacgtgat cgggcgcaag cgcttctaca
    11641 tgctgtgcgt tgcggtcttc accttcgcct ctctgctctg cggcctcgcc ggcagcctca
    11701 gcgcgctgct gctgttccgc atcctgcagg ggatcggcgg cggcggaatg ccgaccagcg
    11761 agcaggcgat gctcgcggat acgtttccgc cggagaagcg gccgcaggcg ttcgcgctgt
    11821 acggcatcgc cgtcatcgtc gcgcccacgg tcggcccgac gatcggcggc tggatcaccg
    11881 acaactactc ctggcattgg atcttcttca tcaacgtccc gatcggtctc atttcgctcg
    11941 ccctggtgca gtggctggtg gtggagcccg aggtgctcga gcgcgaacgg cgcgagcgcc
    12001 tggccgacgg tttcaagatc gactggcagg gcttcgtcct gattgcgatg acgttcggca
    12061 gcctcgaagt cgtgctcgac cgcggccaga tcgaggactg gtttcattcg acctacatca
    12121 tcaccttcgc gacgatcgcg ctgtgttcgt tcctgttctt cattccctgg gagttgacgc
    12181 acagcgatcc gatcgtggac atccgcctgc tctgccggcg ccagttcggc atggcgttcc
    12241 tggtgatgat ggcggtcggc gccatcctgt tcggctccaa ccagatcacg ccgcagctga
    12301 tgcagacgaa ttttccctac accgcgatgc tgtccggctt cgcggtgatg cctgggggcc
    12361 tcgccatgct gatcatgatg ccgatcgccg gccaggtgac cgggctgatg cagccgaaat
    12421 actggatggc gatcggcctc gccaccattg cgctggcgat gtggtactcg acctcgctga
    12481 cgcctgatgc gagcttcggc tacttcgtga cgatgcgcat ctttcagacg atcggcttgc
    12541 cattcctgtt cattccgatc aacagcgtct cctacgatgg cctgccgcag cagaagacca
    12601 gcgaagggtc ggcgctcatg aacgtggccc gcaatctcgg cggcagcttc ggtgtgtcgc
    12661 tggccaacac cgaactgctg cagcgctcgc aattccacca ggcgcggctg gccgagaacg
    12721 tcgtgccgtc gtcgccggcg taccagtcca tcgtgaagca gatcaccgag ttcttcgcgc
    12781 acaccggatc gccggcgaac gccgccgggc gggcgatggg ctatatcggc catatgatcg
    12841 aatcgcaggc ggccatcctg gcctatatcg acattttcta cagctgggcg atctttgctg
    12901 cttgtctcat tccggtagtg ctgctgctga tccggcgggt gcggcgcggc gcggccgaag
    12961 cgacggcgat gcactgaaaa cgccgtcccg gcggcacgtc gccatcacct tcaatcacac
    13021 gcgaccggca ccgccctcct ccaaggcagg cgcgagcaaa aaagcgccac ggcgcgtggc
    13081 acattcttcc ctgcaacgcg ttggcatcgc gacggcgtcg agcctggcag aggatgccag
    13141 tgaggcggca cggacgcggc gttggaaggc ggaagaacgt tacccgaaat gcacctgcgc
    13201 cgaattgtcc gctgcgcgcc acacccggca ccattcttgc ttaactcgtt gccggaggga
    13261 ctggtggggg ttgtcatggg aagacccggg acgatcgccc ggggagaaag gactgccaat
    13321 gtgtgacttt agcctccaaa gcgtgcgctc gcggccggcg aaagtcggcg ataagctggt
    13381 gacgcgagat ttcggcaccg ggacgcg
//
LOCUS       DATMQB010000129         8864 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_345684, whole genome shotgun sequence.
ACCESSION   DATMQB010000129 DATMQB010000000
VERSION     DATMQB010000129.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8864)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8864)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8864
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_345684"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..867
                     /locus_tag="VNY79_04130"
     CDS             <1..867
                     /locus_tag="VNY79_04130"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX71668.1"
                     /translation="PSTVNSAAILSTLPYFAILAVASIGQHLVIQQRGLDLSTAGIMS
                     FAAVVVTKLPNGSTDPGVVLFYVAAALAVGGGIGAITGLIVTLLEVPPLVTTIGVNAI
                     LFGLTYFVSTGASVQSPMMMVDFFVGRFLYVPTTIWVLLLVAGTTVFVLTFTTIGRRF
                     IAVSVNPPAAHAVGIALKTYSILTYALAGFMYATAAIMLSGYLVSPTVLCGLPYLLGT
                     IAAVVVGGNPLGGVTKGSVVATVIGAFFLTYLAQLVTALGFGGSAEDLADAIIVLSGV
                     ALPEITRRLRHA"
     gene            860..3376
                     /locus_tag="VNY79_04135"
     CDS             860..3376
                     /locus_tag="VNY79_04135"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HWX71669.1"
                     /translation="MHDVVQAAAPPVTAHVPLMTLAGLRKSFGPVQALKGVDVLIMPG
                     EVHAIVGENGAGKSTLIGIAAGVLQADAGAIYYDGTCVEAPDPRRMREGGVSAVYQHP
                     ALAPDLTVLENLQLAAPSLAGPGGAEAADGILARIATDELRMPINRRVAELSLAQRHV
                     VEIARALATRPKVLFLDEPTEPLQQADVRKLFGLIEELKRDGVAIVYVSHRLHEVDEL
                     ADRISVMRDGEIIDSRPAQSITPAEIVALIAGRPLGQIFPAKASSVGPPLFAVAGLSG
                     HGFDQVDLAVHAGEIVGLAGIEGEGQREFIRAAAGIDRRHAGGVRVRDAAISGDSPGA
                     FRKAGIGFISDDRHTEGVFLSLTLRENLGLGFLDAISRSGVIDQTKEVERARKITENL
                     RIRAASIESKLLELSGGNQQKALFGREIAAQPTVLLVDEPTKGVDIGARSEIYQRLRA
                     LADQGMAVLVSSSDGIELEGLCDRVLIFARGRIVNELAGAAVTDAAITEANLTATVSR
                     VSAAAAKRPRRSGSKFLASDHFPALVLAALTAIIIGGTQALNGYFLSPVSIKSMLSFF
                     SILAFLSSAQLATVLVGAIDLSVGALAGFCVVLASFLAPDGVDGLALAGGLVLIMAFT
                     VGFGLLQGLLITSLRLPAIVVTIATFIGLQGVSLLLRPTAAGMIDDAISDAAQFPLWL
                     LPAGVALTLAMAAAAEWLLYRTGFGRSFRAVGSSPLASHRLGIDSRRLTVLAFVISGL
                     LTGIGGLMLAGQVGIGSPSTGTDYTLMSITVVVLGGASVAGGRGSFVSTLLGAALVQA
                     TSSASSFIDANSSVHYTVIGTLTLLAAIFFSVARRRAAAA"
     gene            complement(3392..5764)
                     /locus_tag="VNY79_04140"
     CDS             complement(3392..5764)
                     /locus_tag="VNY79_04140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014332821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HWX71670.1"
                     /translation="MTKMSPPSATDGKHSGIGAPVRRREDLRLVRGAGRYTADENLPR
                     QIHAVMVRSPHAHALIRTIAAEKALALPGVLAVLTGADFLADGLKPIPHKPWSPHPAE
                     IVLHNSDGSEAFTPPHYPLPADKARFVGEAVAMVVAETLPAAKDGAERVEVGYEVLPA
                     VTETTAAAQQDAPRVHEGARSNVCIDAEIGDTAATAAAFARAAHVARFATWVRRVTGV
                     PMEPRAVLAAYDPESGRYTVYAGNGGAVRLKNDIAAILDVPADKVRVLMQDVGGNFGT
                     RGMIYPEFALAAWAARRVGRPVKWICERHESFLSDYQARDLAAEAELALDAHGNFLAM
                     RGANLGNLGAHSTSFSMVQKGVEIMSSIYRVPAAHFRARAVLSNSSPTRPYRSAGRPE
                     VIFVIERLIDVAAREFAFDRVELRRRNLVTAAEMPYKNPFGMEYDSGDYPAVMASALK
                     LADWAGFPRRRAEAKKRGKRRGMGVANYVDTASGVPREKAEITVLPEGAVEVVIGITS
                     QGQGHETSFAQLVTEWLGVPIECVRFVTGDTDRVSVGGGAHSGRGMRLGSIVIKKSSD
                     DVVAKAARIAEQLLETAAADIEFKNGRFTVKGTNHSIGLFEVACAALERADLPQDLRG
                     PLAAACDETVAEASFPYGCHVCEVEVDPETGVTTLVGYAAVDDVGLAVNPLIIHGQIH
                     GGIAQGAGQALLEHCHYDAQDGQLLAASFMDYAVPRASDLPFYATGLSEVPSTTHPLG
                     IRPAGEGGTGPALAVIINAIVDALAEFGVRHIEMPATPENVWRAINAARP"
     gene            complement(5843..6445)
                     /locus_tag="VNY79_04145"
     CDS             complement(5843..6445)
                     /locus_tag="VNY79_04145"
                     /EC_number="3.2.2.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008725 - DNA-3-methyladenine glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HWX71671.1"
                     /translation="MSPPIDADGVVRCPWSNKDALYIAYHDEEWGVPEFDDRALYEKF
                     VLDGFQAGLSWITILRKRENFRRAFDGFAPEKIARYTPKKVERLMQDAGIVRNRAKIE
                     GAVLSARAWLEVMEKGPNFSKLLWDFVDGKPKVNRFRTVRQVPAETAISRAMSKELIG
                     RDFKFCGPTIVYAFMQAVGMVNDHLVTCYRHQAVQTLGRT"
     gene            complement(6442..7332)
                     /locus_tag="VNY79_04150"
     CDS             complement(6442..7332)
                     /locus_tag="VNY79_04150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="folate-binding protein"
                     /protein_id="HWX71672.1"
                     /translation="MKAALLPDRGVIKVIGDDARNFLHGLVSADILALKPAVARFCAL
                     LTPQGKIIADFFVVEAPPAQGGGFFFDVARSLTATLVGKLNLYKLRSRLIIEDLSEIL
                     AVLAAWDGEAGTVYGLGYTDPRLPALGLRVMVAPHLAAAASADLGAALVDAGEYEAHR
                     IALGIPSGGVDFRYGDAFPHEADMDQLQGVDFAKGCYVGQEVVSRMEHRGSARSRTVP
                     VRFEGAAPAAGIAITAGERQLGIMGSAAAGHGLALLRLDRVAEALANGQELLAGGVPI
                     RLVKPDWARFAFPGDTKAAE"
     gene            7977..8462
                     /locus_tag="VNY79_04155"
     CDS             7977..8462
                     /locus_tag="VNY79_04155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF992 domain-containing protein"
                     /protein_id="HWX71673.1"
                     /translation="MVHSRSALAAVALILAFVASFSAQAQQGEKVGTLTCKLAPSIGL
                     IIGSQQRMACRFQPSNGGPSEAYAGVQNRIGLDIGITAGGVLVWGVFAQTATPITRGA
                     LAGRYGGASGDIGVGLGVGANVLFGGSNNAISLQPLSLEGSISLNVALGIAGLTLTWV
                     R"
     gene            8515..>8864
                     /locus_tag="VNY79_04160"
     CDS             8515..>8864
                     /locus_tag="VNY79_04160"
                     /inference="COORDINATES: protein motif:HMM:NF013035.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine rich repeat-containing protein"
                     /protein_id="HWX71674.1"
                     /translation="MKIALRFLAAAGLLPLGVVLSVTAYAQSDTMGAILEKLTARIQT
                     LENSCGEDIKKFCSTVTPGEGRVVYCMKAHEDKISPNCAFELDDLEADFQNVLDQFKE
                     AVRACQSDIAKLCG"
BASE COUNT         1402 a         2945 c         2927 g         1590 t
ORIGIN      
        1 ccgagcacgg tgaattccgc cgcgatcctc tcgacgctgc cgtatttcgc catcctcgcc
       61 gtggcctcga tcggccagca tctggtgatc cagcagcgcg gcctcgatct ttcgaccgcc
      121 ggcatcatgt cgtttgccgc ggtggtcgtc accaagctgc cgaacggcag taccgatccc
      181 ggcgtggtgc tgttctacgt cgccgccgcg cttgccgtgg gcggcggtat cggcgctatt
      241 accgggctga tcgtgacgct cttggaagtg ccgccgctgg tgaccacgat cggcgttaac
      301 gccattctgt tcgggctcac ctacttcgtc tcgaccggcg cctcggtcca atcgccgatg
      361 atgatggtcg attttttcgt cgggcgcttt ctctacgtgc cgacgacgat ctgggtgctg
      421 ctgctggtgg ccgggacgac ggtcttcgtg cttacattca ccaccatcgg gcgccggttc
      481 atcgcggtga gcgtcaatcc gccggccgcc catgccgtcg gcatcgcgct caagacctac
      541 agcatcctca cctacgcgct cgccggattc atgtacgcga cggcagcgat catgctttct
      601 ggatatctgg tctcgcccac ggtgttgtgc ggcctgcctt acctcctggg tacgatcgcc
      661 gccgtcgtgg tcggcggcaa cccgcttggc ggcgtcacca agggaagcgt cgtcgccacc
      721 gtgatcggcg ccttcttcct gacctatctc gcccagctgg tgaccgcgct cggcttcggc
      781 ggctcggccg aggacttggc cgacgccatc atcgtcttga gcggtgtggc gcttcccgag
      841 atcacgcggc ggctgcgcca tgcatgacgt cgtgcaggca gccgcaccgc cggtcacggc
      901 acacgtgccg ctgatgacgc tcgccggcct gcgcaagagc tttggcccgg ttcaggcgct
      961 gaagggcgtc gacgtgctga tcatgcccgg cgaggttcac gccatcgtcg gcgagaacgg
     1021 cgccggcaag tcgacgctga tcggcatcgc cgccggagtg ctgcaggccg acgccggcgc
     1081 catctattac gacggcacgt gcgtcgaggc gccggacccg cggcggatgc gcgagggcgg
     1141 cgtctcggcg gtgtatcagc acccggcgct ggcgccggat ctgaccgtgc tggaaaatct
     1201 tcagctggcc gcgccgtcgc tggcgggacc gggcggcgcc gaggcggccg acggcatcct
     1261 ggcgcggatt gcgaccgacg agctgcgcat gccgatcaac cggcgggtgg ccgagctttc
     1321 gcttgcccag cgccatgtcg tcgagatcgc gcgcgcgctc gcaacccgcc ccaaggtgct
     1381 cttcctcgac gaaccgactg agccgttgca acaggccgac gtgcgcaagc tgttcggcct
     1441 gatcgaagag ctcaagcgcg acggtgtcgc catcgtctat gtctcgcatc ggctgcacga
     1501 ggtggatgaa ctagccgacc gcatctcggt gatgcgtgac ggcgagatca tcgacagccg
     1561 tcccgcccag tcgatcacgc cggcggagat cgtggcgctg attgcgggcc ggccgctcgg
     1621 ccagattttc cccgccaagg cgagctcggt agggccgccg ctgtttgccg tcgccgggct
     1681 gagcgggcat ggcttcgatc aggtcgatct cgcggtccat gccggcgaga tcgtcgggct
     1741 cgccggcatc gaaggcgaag gccagcgcga gttcattcgc gccgccgccg gcatcgaccg
     1801 ccgccacgcc ggcggagtac gcgtccgcga cgcggcgatt tcaggcgata gtcccggcgc
     1861 gtttcgcaaa gccgggatcg gcttcatctc cgacgaccgc cacaccgaag gcgtgttcct
     1921 cagcctgacg ctgcgcgaga acctcgggct cggtttcctg gacgcgatct cgcgctccgg
     1981 cgtcatcgat cagaccaagg aggtcgagcg cgccaggaag atcacggaga atttgcgcat
     2041 ccgcgccgca tcgatcgaat cgaagctgct cgaattgtcc ggcggcaatc agcagaaggc
     2101 gctgttcgga cgcgagatcg cggcgcagcc gacggtgctc ctggtcgacg agccgaccaa
     2161 aggcgtcgac atcggcgcac gcagcgaaat ctaccagcgc ctgcgcgcgc ttgccgatca
     2221 gggcatggcg gtgctggtct cctcctccga cggcatcgag ctcgaaggtc tctgcgatcg
     2281 cgtgctgatc ttcgcccgcg gccgcatcgt caatgagctc gcgggtgctg cagtcaccga
     2341 cgcggccatc accgaagcca atctcaccgc gaccgtgtcg cgcgtgagcg cagccgccgc
     2401 gaagcgcccc cgccggagcg gatccaagtt cctggcgagc gatcattttc ccgcgctggt
     2461 gctcgcggct ctcaccgcga tcatcatcgg cggcacgcaa gccctgaacg gctatttcct
     2521 gtcgccggtc agcatcaaga gcatgctgtc attcttcagc atcctcgcct tcctgtcgag
     2581 cgcgcagctc gctaccgttc tggtcggcgc catcgatctg tcggtcggcg cgctcgccgg
     2641 gttctgcgtg gtccttgcct cctttctcgc gcctgacggc gtcgacggcc ttgcgcttgc
     2701 cggcgggctc gtcctcatca tggcgttcac cgtcggcttc ggcctgctgc agggcctgct
     2761 gatcacctcg ctgcgactgc cggcgatcgt ggtgacgatc gcgaccttca tcggcctgca
     2821 aggcgtctcg ctgctgctgc gccccaccgc cgccggcatg atcgacgacg ccatatccga
     2881 cgcggcgcag tttccgctct ggttgcttcc ggccggcgtg gcgctcacgc tcgccatggc
     2941 ggcggctgcc gaatggctcc tctatcggac cggcttcggc cgcagcttcc gcgccgtcgg
     3001 ctcgagtccg ctcgcgagcc accggctggg catcgacagc cggcggctga ccgtgctcgc
     3061 cttcgtgatc tcggggctgc tcaccggcat cggcgggctg atgctcgcgg gtcaggtcgg
     3121 tatcggctcg ccgtcgaccg gcaccgacta tacgctgatg agcatcaccg tcgtggtgct
     3181 gggcggcgcg agcgtcgccg gcgggcgcgg ctcgttcgtg agcacgctgc tcggcgcggc
     3241 cttggtgcag gcgacctcga gcgcctcatc cttcatcgac gccaattcct ccgtgcacta
     3301 cactgtcatc ggcacgctca ctctgctggc cgcgatcttc ttcagcgtgg cgcggcggcg
     3361 cgccgccgcg gcttgagccg cgcgcagtgc gtcacggccg cgcggcgttg atcgcccgcc
     3421 atacgttctc cggcgtcgcc ggcatttcga tatggcggac gccgaattcg gcgagcgcgt
     3481 cgacgatggc gttgatgatg acggcgagcg ccggcccggt gccgccttcg ccggccggac
     3541 gaatccccag cgggtgcgtg gtcgagggca cctcgctcag accggtggca tagaacggca
     3601 ggtcggacgc ccgcgggacg gcgtagtcca tgaacgaggc cgcgagcaat tgaccgtcct
     3661 gcgcatcgta gtggcagtgc tcgagcagcg cctgcccggc gccctgggcg atgccgccgt
     3721 ggatctggcc gtggatgatt agcgggttga cggcaagtcc gacgtcgtcg actgcggcat
     3781 agccgacgag ggtggtcacg ccggtttccg ggtcgacttc gacttcgcaa acgtgacagc
     3841 cataggggaa gctcgcctcc gccacggtct cgtcgcacgc cgccgcgagc gggccccgca
     3901 ggtcttgcgg caggtcggcg cgctcaagtg ctgcgcacgc gacctcaaac aagccgatgg
     3961 aatgattggt gcccttgacg gtgaagcggc cgttcttgaa ctcgatatcg gcggcggcgg
     4021 tttccaaaag ctgctcggcg atgcgtgccg ccttggcaac gacgtcgtcg gacgatttct
     4081 tgatcacgat cgagccgagc cgcatgccgc ggcctgaatg agcgccgccg ccgaccgaca
     4141 cccggtcggt atcgccggtc acgaagcgca cgcattcgat cggcacgccg agccattcgg
     4201 tcaccaattg cgcaaagctc gtctcgtgcc cttggccctg cgaggtgatg ccgatcacca
     4261 cctcgacggc gccctcgggc agaaccgtga tctcggcttt ttcccggggc acgccgctcg
     4321 cggtgtcgac gtagttggcg acgcccatgc cgcggcgctt gccgcgtttt ttcgcctcgg
     4381 cgcggcggcg cgggaaaccc gcccagtcgg cgagcttaag cgcgctcgcc atgacggcgg
     4441 gatagtcgcc gctgtcgtat tccatgccga acggattttt gtacggcatc tcggctgcgg
     4501 tcaccagatt gcgccggcga agctcgacgc gatcgaaggc gaactcgcgc gcggcgacgt
     4561 cgatcaaccg ctcgatgacg aagatgactt ccggcctgcc ggcactgcgg taggggcggg
     4621 tcggcgagct gttgctgagc acggcgcgtg cgcggaagtg cgcggcgggc acgcggtaga
     4681 tgctcgacat gatctcgacg cccttctgca ccatggagaa gctggtgctg tgggcgccga
     4741 ggttgccgag attggcgcca cgcatggcga ggaaattgcc gtgcgcgtcg agcgcgagct
     4801 ccgcttcggc ggcgagatcg cgcgcctggt agtcgctgag gaacgattcg tggcgctcgc
     4861 agatccattt gaccggccgt ccgacgcggc gcgccgccca cgccgccagc gcgaattcgg
     4921 gatagatcat gccgcgcgtg ccgaaattgc cgccgacgtc ctgcatgagc acgcgcacct
     4981 tgtcggcggg tacgtcgagg atggcggcaa tgtcgttttt caaccgcacc gcgccaccgt
     5041 tgccggcgta gaccgtgtag cgcccgcttt cgggatcgta cgcggcgagc acggcgcgcg
     5101 gctccatcgg cacgccggtg acgcgccgca cccaggtcgc gaagcgcgcg acatgggcgg
     5161 cgcgcgcgaa ggcggcggcg gtcgctgcgg tatcgccgat ttccgcgtcg atacagacgt
     5221 tggagcgcgc gccttcgtgc acgcgcggcg cgtcctgttg tgccgccgcc gtcgtttcgg
     5281 ttactgccgg caggacctcg tagccgacct cgacccgctc ggcgccgtcc ttcgcagccg
     5341 gcagcgtttc ggcgacgacc atcgccaccg cctcgccgac gaagcgcgcc ttgtctgccg
     5401 gcagcggata gtgcggcggg gtgaacgcct cgctgccgtc gctgttgtgc agcacgatct
     5461 ccgccggatg cggcgaccac ggcttgtgcg ggatgggctt taggccatcg gcgagaaagt
     5521 cggcgccggt gagcaccgcc agcacgccgg gaagcgccag ggccttctcc gcggcgatcg
     5581 ttcggatcag cgcgtgcgca tgcggcgagc gcaccatgac ggcatggatc tggcggggca
     5641 ggttctcatc ggcggtgtag cggccggccc cgcgcaccag gcgcaggtct tcgcgccggc
     5701 gcaccggcgc gccgatgccg gagtgtttgc cgtcggtcgc cgagggcggg ctcatcttcg
     5761 tcatggcacc cggactatat cgacgggcat cgccgcggcg aaacctgaca accgcgaagg
     5821 gagggcaggc gtgacccgcg gctcaggttc ggccgagcgt ctggaccgcc tggtggcgat
     5881 agcaggtgac cagatgatcg ttcaccatgc cgacggcctg catgaaagcg tagacgatgg
     5941 ttggcccgca gaatttgaag tcgcggccga tgagttcctt cgacatcgcg cgcgatatgg
     6001 cggtctcggc cggcacctga cggacggtgc gaaaccggtt gaccttgggc ttgccgtcga
     6061 cgaagtccca cagcagcttc gagaagttgg gtcccttctc catcacttcg agccaggcgc
     6121 gggccgagag caccgcgccc tcgatcttgg cgcggttacg aacgatgccc gcgtcctgca
     6181 tcagccgctc gaccttcttg ggcgtgtagc gcgctatttt ctccggcgca aaaccgtcga
     6241 aggcgcggcg gaagttttcg cgcttgcgca ggatcgtgat ccacgagagg ccggcctgga
     6301 agccgtcgag cacgaacttc tcgtagagcg cgcggtcgtc gaattccggc accccccact
     6361 cttcgtcgtg ataggcgata tagagcgcgt ccttgttcga ccagggacag cgcacgacgc
     6421 cgtcggcgtc aatcggaggg ctcattcggc ggccttcgta tcaccgggaa aagcaaaccg
     6481 cgcccagtcc ggcttgacca ggcggatcgg aacaccgccg gcaagaagct cttggccgtt
     6541 cgccagcgcc tccgcgaccc ggtcgaggcg aaggagcgcg agtccgtggc cggcagccgc
     6601 cgagcccatt atgccgagct ggcgctcacc cgccgtaatc gcgatacccg ccgccggcgc
     6661 cgcgccctcg aagcggaccg gcaccgtgcg cgagcgggcg ctgccgcggt gctccatgcg
     6721 cgagaccacc tcctggccga cgtagcagcc cttggcgaaa tcgacgcctt ggagctggtc
     6781 catgtcggcc tcgtgcggga aggcatcgcc gtaacggaaa tcaacgccgc cgctcggaat
     6841 gccgagcgcg atccggtgcg cctcgtactc gcccgcatcg acgagcgccg cgccgagatc
     6901 ggcggaggca gcagcggcaa ggtgcggcgc caccatcacg cgcaggccca gcgccggcag
     6961 acgaggatcc gtgtagccga ggccgtatac ggtcccggct tcgccgtccc aggccgccag
     7021 cacggcgagg atctccgaca agtcttcgat gatcaggcgg gagcgcagct tgtagaggtt
     7081 gagcttgccg acaagcgtcg ccgtgagcga tcgcgccacg tcgaagaaaa acccgccacc
     7141 ctgggccggc ggcgcttcga cgacaaagaa atcggcgatg atcttgccct gcggcgtcag
     7201 cagcgcgcag aaccgcgcta ccgcaggctt cagggcgagg atgtcggcgc tgacgagccc
     7261 gtgaagaaag ttccgcgcgt cgtccccgat gaccttgatc acgccgcggt ccggcaggag
     7321 ggcagccttc atgcgcgcaa ctttcccggc atccaggcga aactaaggtt cccgcggcgt
     7381 cctctcaagt gttcgctggg tttctcggct ctaaccagcc ggtcgctggg acccctgtcg
     7441 cgcggcctga gtgcctgccc tagtgacttg gctgcttctc gacttccgcc cgctttgcat
     7501 aataaggggt cacaaggaag ccgcgcacga gtgatgatct gctttccgcg tcgaagttca
     7561 gcggctcgtt ccagtccggt aaacacaata caaacaatac tttacgtcga atatttcctt
     7621 ctttagactg gagtggggta tactgaggaa cgcgcaaagt cttggcgcaa cgagctcgta
     7681 atcgcgcgct attgcagtct gaatagcgac ccttgggact acgaacggaa atacactcct
     7741 gacgcacgtc tacccgcttg gactgtacga tagggtgcaa agctggtggt cacgcacgag
     7801 aggcagtccg cggctaagca cttgcatcct ttcgcagagg ccttgattca gatcaactag
     7861 gcacgcaccg gctcaggcta aattaaatct tggctcgggg actctgctgg gaacattccg
     7921 aaaatgcctg acgccgtgta ggtcaagggc atcgttttca aagggattgg tagatcatgg
     7981 ttcactctcg ttcggcgctc gcggcagtcg cgctgatttt agccttcgtc gcgtccttct
     8041 ctgcgcaggc gcagcaaggg gaaaaggtcg gcacgctgac ctgcaagctc gccccgtcga
     8101 tcggccttat cattggttcg caacaacgca tggcatgccg gttccagccg tccaacggag
     8161 gcccatcgga agcctatgcg ggggtgcaaa atagaattgg cctcgacatc ggcatcaccg
     8221 ccggcggcgt gttggtgtgg ggcgtctttg cgcaaacggc gacgccgatc actcgcggcg
     8281 cgctggcagg gcgctacggc ggcgcgagcg gtgatatcgg agtaggcctc ggcgtaggcg
     8341 ctaatgttct gttcggcggt tcgaacaacg cgatctcgtt gcagccactg tctctcgagg
     8401 gctcaatcag cctgaatgtc gctcttggca ttgccggtct cacgctgaca tgggtgcggt
     8461 gacccaagaa ttcgctcgat gccgttttca aagccgatcg tgagaggata ctcgatgaaa
     8521 atcgcactcc gcttcctggc cgcggcaggg ctcctgcctc tgggcgtcgt cctatcagtc
     8581 accgcgtacg ctcaaagcga tacgatgggc gcgattctgg aaaagctgac ggcgcgaatc
     8641 caaacgctgg agaattcctg cggcgaggat atcaagaaat tctgcagcac cgtgacaccc
     8701 ggcgaaggcc gcgtcgtcta ttgcatgaaa gcgcatgagg acaaaatcag ccccaattgc
     8761 gcgttcgaac ttgacgacct ggaggcggat tttcaaaatg tcctcgacca gttcaaggag
     8821 gccgtgcgcg cctgtcagag cgacatcgca aaattgtgcg ggca
//
LOCUS       DATMQB010000130         4414 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1280888, whole genome shotgun sequence.
ACCESSION   DATMQB010000130 DATMQB010000000
VERSION     DATMQB010000130.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4414)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4414)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4414
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1280888"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..210
                     /locus_tag="VNY79_04165"
     CDS             <1..210
                     /locus_tag="VNY79_04165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HWX71675.1"
                     /translation="YCVLAAGHIDLVIETELKPHDVLALIPIIEGAGGIITTWENGRP
                     YSGGRIIAAGDRRTHAAAMALLAGA"
     gene            complement(265..1209)
                     /locus_tag="VNY79_04170"
     CDS             complement(265..1209)
                     /locus_tag="VNY79_04170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HWX71676.1"
                     /translation="MKLVSIPANPVPEGIVTGTLNTPDGVSLRFARWLPPAGRRGTVC
                     ILPGRSEWIEKYFETVRDLRARGFAVAILDWRGQGLSDRALPDRRRGHVRNFSEYDLD
                     LETLMREVVLPDCPPPLFAIGHSMGATVLLRAAFQGHRWFDRIVLSAPMIAVAGMNSI
                     ATAGTMLRLMRLAGFGAMPVPGRYAGVLDLRPFAGNILTTDPVRYARNAAIVEAEPAL
                     GLGGPTVAWADAAFRAMRTLCEPSFPTQIRQPILIVAAGRDAVVSNTAIEEFSMLLRS
                     GSHLVVVGAQHELLMEQDRFRAQFWAAFDAFVPGTPLY"
     gene            1460..1915
                     /locus_tag="VNY79_04175"
     CDS             1460..1915
                     /locus_tag="VNY79_04175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp20 family protein"
                     /protein_id="HWX71677.1"
                     /translation="MRTFDLTPLYRSTVGFDRLFSMLDQGLDGAAPGYPPYNIERTGD
                     NEYRVTVAVAGFAENELSVVAKENTLTIRGEKNAKEEEKRGDVLYQGIAARAFERAFQ
                     LADFVQVKGAKLENGLLHVDLVREIPEAKKPRTIPIGNGNAAVEHKEAA"
     gene            complement(2011..2604)
                     /locus_tag="VNY79_04180"
     CDS             complement(2011..2604)
                     /locus_tag="VNY79_04180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71678.1"
                     /translation="MRVSVIGAAALSLLLLAAAPSHAQAQSQPAPLPGFITSHEVTRI
                     ARSAGFEPVAPPLREGTTYVLRAMDFRGILMRVVVDARSGAIRAVNRIVAGPGFYGPP
                     IGMAAPYGYPDGYGLGMAPGDEIVTPPMPPFVGRTAVHPLLTPPLPRPRPHALASHRP
                     AEEAGHADKTGAISGSASAASAAPVAPSRPTPVPLND"
     gene            complement(2687..3730)
                     /locus_tag="VNY79_04185"
     CDS             complement(2687..3730)
                     /locus_tag="VNY79_04185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low specificity L-threonine aldolase"
                     /protein_id="HWX71679.1"
                     /translation="MNFSSDNTAPVAPEILDAIVRANEGFAPGYGADPWTAAVERRFS
                     EIFERDVAVFLVPTGTAANALALAHVAPPWGVVLCHAESHIATDECGAPEFFGAGLKL
                     VELPGAGAKITPDMLTTALKGYGGHSPHQMIASALSLTQASEAGTVYRPDEIAALCAI
                     AHERALAVHMDGARFANALVRLEVTPAQMTWRSGIDVLSFGATKAGALAAEAVVFFDT
                     ARAAFFAERRKRAGHLLSKHRFLAAQFDAALAEDRWLKLARHANAMADRLAQKLAAIG
                     LAPAWPVESNLVFVALPRALDARLKAAGARYYVRPSESLEVDIDRVLVRLVTSFATRE
                     DEVDRFVALCKKF"
     gene            complement(3738..>4414)
                     /locus_tag="VNY79_04190"
     CDS             complement(3738..>4414)
                     /locus_tag="VNY79_04190"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HWX71680.1"
                     /translation="KRVSPESALLMLHWQNSVCDPKGVWGRNLCSQIEKNNAIRNAQK
                     VLVTARARGMLTIFVNIGWRPGFPEMPENQYYPLLQGAKNENKGIIGTWEVEVIDALK
                     PASGELVVINCGSDSFEGTDLDRILRASNIGHLFVSGQCIEHVVATTIKRAANMGYNA
                     ILIKDATSGFTDANYTAMLDILPLYSKVISSDQFALEAPYGSAERGMTTSSKDSFTGR
                     LAWLRA"
BASE COUNT          765 a         1440 c         1507 g          702 t
ORIGIN      
        1 tattgcgtgc tcgccgccgg ccatatcgat ctggtgatcg agaccgagct caaaccgcac
       61 gacgtcctgg cgttgatccc gatcatcgaa ggcgcgggcg gcatcatcac cacctgggag
      121 aacggccgcc cgtattccgg cggacgcatc atcgccgccg gcgaccgccg gacgcacgcc
      181 gcagccatgg cgctgctggc aggcgcctag cgcctgtttc cggccggcgt cgcgatcgca
      241 caaggcggcg cgagcgcggc ggtatcagta caagggcgtg ccgggcacga acgcgtcgaa
      301 ggcggcccag aactgggcgc ggaagcgatc ctgctccatg agaagctcgt gctgggcgcc
      361 gaccacgacg aggtgcgacc ctgagcgcag cagcatggaa aattcctcga tcgcggtatt
      421 cgacaccacg gcgtcacggc cggcggcgac gatgaggatc ggctgacgga tctgcgtcgg
      481 aaagctcggt tcgcagagcg tgcgcatggc gcggaaggcg gcgtcggccc aggcgaccgt
      541 cggaccaccg aggccgagcg ccggctccgc ctcgacgatg gcggcgttgc gggcgtagcg
      601 caccgggtcg gtggtgagga tattgccggc gaacggccgc aggtccaata cgccggcata
      661 gcggccgggc accggcatcg cgccgaagcc ggcgagccgc atgagtcgca acatcgtgcc
      721 ggccgtggca atcgaattca tgcccgccac cgcgatcatc ggtgcactga gcacgatgcg
      781 gtcgaaccag cgatggcctt gaaaggctgc gcgcagcagc acggtcgcgc ccatggaatg
      841 gccgatggca aagagcggcg gcgggcaatc cggcagcacg acctcgcgca tcaacgtttc
      901 gagatcgaga tcgtattcgg agaagttgcg cacgtggccg cggcggcgat ccggcagcgc
      961 acggtcggaa aggccctgtc cgcgccaatc aaggatggcg acggcgaagc cgcgcgcccg
     1021 cagatcgcgc acggtctcga aatatttctc gatccattcg ctgcggccgg gcaggatgca
     1081 caccgtgccg cggcggccgg ccggcggcaa ccagcgggcg aatcgcagcg aaaccccgtc
     1141 gggcgtgttg agcgtgcccg tcactatgcc ttcgggaacg ggattcgccg ggatcgagac
     1201 gagcttcacc ggcagcggcg ggctccgcgg ctcggtattt ccgtcgtccg atatctgcgt
     1261 ctgcatcgct ccttcctata gcagccggca accgtgagcg gctcatggaa tgctcaaggc
     1321 cggaacgttc cctggcattg cgacgggggc aaggcatccc catctttttt ctgcgcaggc
     1381 caacaaggct gcgcacgatc cataggtctg gtccgacaag ggcagacccc cgcatgtcgc
     1441 ttcagaagga ggatatgcca tgcgaacttt cgatctcaca cccctctatc gttcgaccgt
     1501 cggctttgac cggctgttct cgatgctcga tcagggcctc gacggcgccg cgcctgggta
     1561 cccgccctac aacatcgagc ggaccggcga caacgagtat cgtgtcaccg tcgcggtagc
     1621 cggcttcgcc gagaacgagc tctcggtcgt ggccaaggag aacactctga ccatccgcgg
     1681 cgagaagaac gccaaggagg aagagaagcg cggcgacgta ctctatcagg gcattgccgc
     1741 tcgagctttc gagcgcgctt tccagctcgc cgacttcgtc caggtcaagg gcgccaagct
     1801 tgagaacggc ctcctgcacg tcgacctcgt gcgcgagatt cccgaggcga agaagccccg
     1861 cacgatcccg atcggcaacg gcaacgcggc cgtcgagcac aaagaggcgg cctaagcggc
     1921 ccggatttga aatccgatgt aatgcagcgc cccggttttc cggggcgctt tttgttgggc
     1981 gccggctgcg ccggccaccg gcgcggcagc tcagtcgttc agcggaacgg gtgtcggtct
     2041 gctcggagca accggagcgg cgctcgcggc cgatgcactc cccgatatcg ccccggtctt
     2101 gtcggcatgg cctgcctcct cggcggggcg gtgtgatgcg agcgcgtgag gacggggacg
     2161 cggaagcggc ggcgtgagca gcggatggac cgcggtgcgg cccacgaacg ggggcatcgg
     2221 cggggtgacg atctcatcgc ctggcgccat tccgagacca tagccgtcgg ggtacccgta
     2281 aggagccgcc attccgatcg gcgggccata gaaaccgggg ccggcgacga tcctgttgac
     2341 ggcgcggatc gcgccgctgc gcgcatcgac cacgacgcgc atgaggatgc cgcgaaaatc
     2401 catcgcgcgc agcacgtagg tcgtgccttc gcgcagcggc ggcgctaccg gctcgaaacc
     2461 ggccgagcgc gcgatcctgg tgacctcgtg ggatgtgata aatccgggga gtggcgccgg
     2521 ctgcgactgc gcttgcgcat ggcttggcgc ggcggccagc agcaacaagg acaatgccgc
     2581 ggccccgatt acgctgaccc gcacggaacc cccctccgca ccgcgcaccg atactcgcgc
     2641 gcgctctcac aaccttactc gcaattgggg cgccgcttgg gcgcgatcag aattttttgc
     2701 acaaagcaac gaagcgatcc acctcatcct cccgggtcgc gaacgaggta acgagccgca
     2761 ccaggacgcg atcaatgtcg acttccagac tttcgctcgg ccgcacgtag tagcgggcgc
     2821 cggcggcctt aagccgtgcg tcgagggcgc gtggaagagc gacgaagacg agattggatt
     2881 ccacgggcca agccggagcg aggccgatgg cggcgagctt ttgcgccagc cggtcggcca
     2941 tggcattggc gtgacgcgcg agcttgagcc agcggtcctc cgccagcgcc gcgtcgaatt
     3001 gcgcggcgag gaagcggtgc ttggagagga ggtggccggc gcgcttgcgc cgttcggcga
     3061 agaatgcggc tcgcgccgta tcgaaaaaca ctacggcttc cgccgccagc gcgcccgctt
     3121 tggtcgcgcc gaacgacaac acgtcgatgc cggaccgcca cgtcatctgt gccggcgtga
     3181 cctctagccg gaccagcgcg ttggcgaacc gcgcgccgtc catatgcacg gcgagcgcgc
     3241 gctcgtgcgc gatggcgcac agggcggcga tctcgtccgg acgatagacg gtgccggctt
     3301 cgctcgcctg ggtgagggag agcgcggacg cgatcatctg atgcggactg tggccgccgt
     3361 accccttgag cgccgtggtg agcatgtccg gcgtgatctt ggcgccggcg ccggggagct
     3421 cgacgagctt gaggccggcg ccgaagaact ccggcgcacc gcattcgtca gtggcgatat
     3481 gcgactcggc atgacagagc acgacgcccc agggcggggc gacgtgtgcg agcgccagcg
     3541 cattggccgc ggtcccggtc ggcaccagga acaccgccac gtcgcgctcg aaaatctcgg
     3601 agaagcgccg ttcgaccgcg gcggtccacg ggtccgcgcc atagccgggc gcaaacccct
     3661 cgttcgcgcg cacgatggcg tcgaggattt cgggtgcgac cggcgccgtg ttgtcgctgg
     3721 aaaagttcat tgccgcgtca cgcgcgaagc cacgccaggc ggccggtgaa cgagtctttg
     3781 gacgacgtgg tcatgcctct ctcggcgctg ccgtagggag cctcgagcgc gaattgatcg
     3841 gagctgatga ccttcgagta cagcggcagg atgtccagca tggccgtgta gttggcgtcg
     3901 gtgaagccgc tcgtcgcgtc cttgatgagg atggcattgt agcccatgtt cgccgcgcgc
     3961 ttgatcgtcg tcgccacgac gtgctcgatg cactggccgc tgacgaacag atggccgatg
     4021 ttgctggcgc ggagaatccg gtcgagatcg gtgccttcga aactgtccga gccgcagttg
     4081 atgaccacga gttcgccgct cgccggcttg agcgcatcga tgacctcgac ctcccacgtg
     4141 ccgatgatgc ccttgttctc gttcttggcg ccctgcagca gcggatagta ctggttctcc
     4201 ggcatttcgg gaaaacccgg acgccagccg atgttgacga aaatcgtcag catgccccgc
     4261 gcccgcgcgg tgacgagaac cttctgcgcg ttcctgatcg cgttgttctt ctcgatctgc
     4321 gagcaaagat tccggcccca gactcctttg gggtcgcaca cgctgttctg ccaatgcagc
     4381 atcagcagcg cggattccgg tgacacccgc ttgg
//
LOCUS       DATMQB010000131         4581 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_347376, whole genome shotgun sequence.
ACCESSION   DATMQB010000131 DATMQB010000000
VERSION     DATMQB010000131.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4581)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4581)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4581
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_347376"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..978
                     /locus_tag="VNY79_04195"
     CDS             <1..978
                     /locus_tag="VNY79_04195"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071111 - cyclic-guanylate-specific
                     phosphodiesterase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing phosphodiesterase"
                     /protein_id="HWX71681.1"
                     /translation="GHKVVVTASIGIALATTALDPDQFLRNADMALYWAKAEGRGTWR
                     WFETKMEANALARRNLELDLRHALESEAFELYYQPLFNLKTKRIMACEALLRWPHRER
                     GMVSPAEFIPVAEEMGLIVEIGNQVLYKACLECRRWPGDTAVTVNVSSTQFERSNVPA
                     LVRETLAATNLPPHRLEIEITESTLLVDTKRTRADLHQLAELGVTISLDDFGTAYSSL
                     SYLHSFPLQKVKIDQSFLRDLGEDERRVTLLRGMTRLSAQLGLRVVVEDVETQDQLEL
                     LAAEDSVDEVQGYLLARPMPASDLRRLLYASYVAPVSTSWTARLHKDVA"
     gene            1201..1965
                     /locus_tag="VNY79_04200"
     CDS             1201..1965
                     /locus_tag="VNY79_04200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71682.1"
                     /translation="MAPEGSFSDQVVRLLDRIEYRRADSAAQREAIFRLRYQAYMRDG
                     TIAPSADRMFSDPYDDRGNVYLFGLYLDGVLASSLRLHVGSADQPDFPSREVFPDFLQ
                     PLLDAGKVIVDPTRFVVDDVLARLHRALPYATLRLCGMAAQYFGADHLLAAVRVEHQA
                     FYGRVFRHQLVYEPRAYPHLSKPICLMTIHYPTVAEDAYRRYPFFRTTASEQTMLFDR
                     SRPGAVRWQASTVAREVPSVDLKAAEPAGAIGRTSR"
     gene            2224..2400
                     /locus_tag="VNY79_04205"
     CDS             2224..2400
                     /locus_tag="VNY79_04205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71683.1"
                     /translation="MPKLRAQLTFRRSRTPHIDSCGFESYSFACSECAAPLGGIVDPR
                     DDTLLLCELTTRVR"
     gene            complement(2413..3432)
                     /locus_tag="VNY79_04210"
     CDS             complement(2413..3432)
                     /locus_tag="VNY79_04210"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006467356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004364 - glutathione transferase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HWX71684.1"
                     /translation="MAHGVFVDGVWHTEWYDAKATGGRFVPFEPVFRNWVTADGSPGP
                     SGEGGFAAEPGRYHLYVSLACPYAHRTVIFRKLKKLEGAISMSILDPVMGDQGWEFGD
                     GPGTIADTVNGKRRLGEIYLLANPRYTGRVSVPVLWDKKRRTIVNNESPEIIRMLNSA
                     FASATADRADYYPAELRAAIDRINARVYNDVNIGVYRAGFATAQDVYEDGCRIVFAAL
                     DWIEDLLSRQRFLAGARLTEADWRLFTTLVRFDAVYYSHFKCNLRRIADYGNLANYLR
                     DLYQVPGIADTVNMDHIKRHYYMSMTAINPTRIVPLGPELDFSTPHDRGRFEKAARPV
                     EHVGG"
     gene            complement(3544..4224)
                     /locus_tag="VNY79_04215"
     CDS             complement(3544..4224)
                     /locus_tag="VNY79_04215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta family hydrolase"
                     /protein_id="HWX71685.1"
                     /translation="MSSSDPQSVDIAGDAGIRVSGLLQAPPQARACYVLAHGAGAGMS
                     HPFMAAVAAELAARGIASLRYQFPYMERRAKRPDPPPLAQMTVRAAVAAAARALPDLA
                     LIAGGKSFGGRMTSQAQAKAPLPGVRGLAFLGFPLHPANRPSHDRAAHLFDVHIPMLF
                     LQGTRDALAALDQIEPVCKKLGGRATLTLFENADHSFHVPARSGRTDAQIRGEMLDAL
                     ASWIDRVI"
     gene            4402..>4581
                     /locus_tag="VNY79_04220"
     CDS             4402..>4581
                     /locus_tag="VNY79_04220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2277 domain-containing protein"
                     /protein_id="HWX71686.1"
                     /translation="MCRNIRTLFNFEPPATEEEIRASAIQFVRKLSGFTNPSHANEPA
                     FRRAVEEVSEAARRLI"
BASE COUNT          775 a         1503 c         1476 g          827 t
ORIGIN      
        1 ggccacaagg tagtggtcac cgccagcatc ggaatcgcgc tggccaccac cgcgctcgac
       61 ccggaccagt tcctgcgcaa cgccgacatg gcgctgtatt gggcgaaggc cgagggccgc
      121 ggcacgtggc gctggttcga gaccaagatg gaagccaacg ccctggcgcg ccgcaatctt
      181 gaattggatc tgcgccacgc gctggagagc gaagcgttcg agctctacta ccagccgctg
      241 ttcaatctga aaaccaagcg catcatggcc tgcgaggcgt tgctgcgctg gccgcaccgc
      301 gaacgcggaa tggtgtcgcc ggcggaattc atccccgtcg ccgaggaaat ggggctgatc
      361 gtcgagatcg gcaaccaggt cctgtacaag gcctgcctcg aatgccggcg ctggcccggc
      421 gataccgccg tgaccgtcaa tgtctcgtcg acccagttcg aacgctccaa cgttccggcg
      481 ctcgtgcgcg agacgctcgc cgccacgaat cttccgccgc accggctgga gatcgagatt
      541 accgaatcga ccttgctcgt ggacacgaag cgaacgcgcg ccgacctgca tcagcttgcg
      601 gagctcgggg tgacgatctc tctcgatgac ttcggcaccg cgtattcgag tctcagctac
      661 ctgcacagct tcccgctgca gaaggtgaag atcgaccagt cgttcctgcg cgacctcggc
      721 gaggacgagc gccgggtgac attgctgcgc ggcatgacgc ggctcagcgc gcagcttggc
      781 ctgcgcgtcg tcgtcgagga cgtcgagacc caggaccagc tcgaactgct cgccgccgag
      841 gacagcgtcg acgaggttca gggctacctg ctggcgcggc ccatgccggc ctccgatctg
      901 cgccggctgc tttatgcctc ctacgtggct ccggtttcga cctcgtggac ggcaaggctg
      961 cacaaggatg tggcatgagt gcagggagcg ggtcgcgtgc cggttgcttc ggtccctccc
     1021 ggccgcgatc ctggcgttaa ccttgattaa tcggttagcc gttgcacgta tgtaaagttg
     1081 tgatcgcgtt tacaatggtt aacctcttca ctgctggcac gggagggtgt caacagggac
     1141 gtttgtatgg gtgaaataac gacattctcg catcaatctc gtccgtctct ttgcgatcaa
     1201 gtggcaccag aaggcagttt ctccgatcag gttgtgcggc tgctcgaccg gatcgagtac
     1261 cgacgggccg attcagcagc gcagcgcgag gccatattcc gcctccgcta ccaggcgtac
     1321 atgcgcgacg gaacgatcgc gcccagcgcc gaccggatgt tttccgaccc ttacgatgac
     1381 aggggcaacg tctatctgtt cgggctgtat ctcgacggcg ttctggcgag ttcgctgcgc
     1441 ctgcacgtgg gctccgccga ccagccggac tttccctcgc gcgaggtctt tcccgatttc
     1501 ctgcagccct tactcgatgc cggcaaggtg atcgtcgatc cgacccgttt cgtcgtcgac
     1561 gacgtcctcg cccggctgca ccgtgccttg ccctatgcca cgctgcggct ctgcggcatg
     1621 gctgcacaat atttcggcgc cgaccatctt ctcgccgccg tccgcgtaga gcatcaggcg
     1681 ttctatgggc gcgtcttccg tcatcaactg gtctacgagc cgcgggccta cccgcacctg
     1741 agcaagccga tctgcctgat gaccatccac tatccgaccg tcgcggaaga cgcctatcgg
     1801 cgctatccgt tcttccgcac cacggcgtcc gaacagacga tgttgttcga tcgcagcagg
     1861 ccgggcgcgg tgcgctggca ggcgagcacg gtcgccaggg aggttcccag cgtcgatctc
     1921 aaagccgctg agcccgccgg ggcgatcggc cgcaccagcc ggtaattccc tttctcgccg
     1981 gcttgggcgc cgcataagac ccgcgcgccg cgccgagatc gctgcatcgc gctgtcgctt
     2041 gagggaacgc ctgtcgcggc gctcggcatt caactaaaat tctacagatc atcttcagcg
     2101 gcgatttccg aagcctggat atgaaaattc catgttcgga aattcagctc gaccggcggg
     2161 tgccgcccct gcggcgcatc ctgccgacac aaccggcacg gcaacggagg cgcggaccgt
     2221 cgcgtgccca agctgcgcgc ccagctcacg ttccgcagaa gccgcacgcc gcatatcgac
     2281 agctgtggtt tcgagagcta cagcttcgcg tgcagcgagt gcgcagcgcc gctcggcggc
     2341 atcgtcgacc cccgcgacga cacgttgctg ctttgcgaat tgacgacgcg cgtccgctga
     2401 gccactgccc gcttatccac cgacgtgttc gacgggccgc gccgccttct cgaagcggcc
     2461 gcgatcgtgc ggcgtggaga aatccagttc cggcccgagc ggcacgatgc gcgtcggatt
     2521 gatcgccgtc atgctcatgt aatagtgccg cttgatgtga tccatgttca cggtgtcggc
     2581 gatgccgggc acctgataga ggtcgcgcag gtagttcgcc agattgccat agtcggcgat
     2641 gcggcgcagg ttgcatttga agtggctgta gtagacggcg tcgaagcgga cgagcgtggt
     2701 gaacagccgc cagtccgcct cggtcagccg tgcgccggcg agaaagcgct ggcgcgacag
     2761 cagatcctcg atccagtcga gcgctgcgaa cacgatgcgg cagccatcct cgtagacatc
     2821 ctgcgcggtg gcgaagccgg cgcgatagac gccgatgttc acgtcgttgt agacgcgcgc
     2881 attgatgcgg tcgatcgccg cgcgcagctc ggcgggatag tagtcggcac gatcggctgt
     2941 ggccgacgca aacgccgaat tgagcatgcg gatgatctcc ggcgactcgt tgttgacgat
     3001 ggtgcggcgc ttcttgtccc agagcaccgg cacggagacg cggccggtgt agcgcggatt
     3061 ggcgagcagg tagatttcgc cgaggcggcg tttgccgttg accgtgtcgg cgatcgtgcc
     3121 cggcccgtcg ccgaactccc agccctgatc gcccatgacc ggatcgagga tcgacatcga
     3181 gatcgcgccc tcgagcttct tcagcttgcg gaagatcacg gtgcggtgcg cgtacgggca
     3241 ggcgagcgag acgtagaggt gatagcggcc gggctcggcg gcaaagccgc cctcgccgct
     3301 cggtccgggg ctgccgtccg ccgtgaccca gtttcggaac accggttcga acggcacgaa
     3361 gcgcccgccg gtcgccttgg cgtcgtacca ttcggtgtgc cacacgccgt cgacaaatac
     3421 cccgtgcgcc atgtcgttcc tctcctggaa cgcaatcgtt tcagttgaat cgattgcgct
     3481 ctggtttcct tagtggagta tgatcttgcc ggaaaacccg tttccacttt tccggatcat
     3541 gttctaaatc acccggtcga tccaggatgc gagagcatcc aacatttcgc cgcgtatctg
     3601 cgcgtccgtg cggccgctgc gcgccggcac gtgaaacgaa tgatcggcgt tctcgaacag
     3661 cgtcagcgtc gcacgcccgc cgagcttttt gcacaccggc tcgatctgat cgagggccgc
     3721 gagcgcgtcg cgcgtgccct gcaggaacag catggggatg tgcacgtcga agagatgtgc
     3781 ggcgcggtcg tgcgacgggc gattggccgg atgcagcgga aagccgagga atgccagccc
     3841 gcgcacgccc gggagcggcg ccttcgcctg cgcctgcgag gtcatccgcc cgccgaacga
     3901 tttgccgccg gcgatgagcg ccaggtccgg caatgcgcgg gcggccgcgg ccaccgcggc
     3961 gcgcaccgtc atctgtgcca agggcggcgg atcgggacgt ttggcgcgcc gttccatata
     4021 gggaaactga tagcgcaagc tcgcgatccc gcgggccgcg agttcggccg cgaccgctgc
     4081 catgaacggg tggctcatgc cggctccggc gccgtgcgcc agcacgtagc aggctcgtgc
     4141 ctgcggcggc gcttgcagca ggccggaaac acgaatgccg gcgtcgccgg caatgtcgac
     4201 ggattgagga tcagaggatg acaccaggcg tctctgcctg tgcggctgcg ggccgtcaac
     4261 ttagcgccgc gatcctcgtt tcccaagccg ccgcatcgcg ggcgagcggg gccgggaacg
     4321 gcgaaggcct ccggacgccg gcactgcgtt tcgccggcgc cccatccgcg ctagaatcct
     4381 gacccaccga aggaggcgcc gatgtgtcgc aatattcgca cactgttcaa cttcgaacca
     4441 ccggcgacgg aggaggagat tcgcgcctcc gcgatccagt tcgtccgcaa gctgagcggt
     4501 ttcaccaatc cctcgcacgc caacgagccg gcgttccgcc gcgccgtcga ggaagtgtcg
     4561 gaagcggcgc gccgcctgat a
//
LOCUS       DATMQB010000132         3526 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2517364, whole genome shotgun sequence.
ACCESSION   DATMQB010000132 DATMQB010000000
VERSION     DATMQB010000132.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3526)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3526)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3526
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2517364"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            97..909
                     /locus_tag="VNY79_04225"
     CDS             97..909
                     /locus_tag="VNY79_04225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HWX71687.1"
                     /translation="MRLIGSRSARRFAAAAVVAALAAATAGCQTTQSTPTAAALPIRA
                     VADRSDADWRQDLAVYGQQYRANPGNVDAALHYAQALRATGQRAQAVAVLERVSLANP
                     RDKTVLGAYGRALAEAGNFNQALEVLGRAHSPDQPDWHVLSAQGAVLDQMGRHAEAQR
                     YYVTALKIVPEEPSVLSNLGLSYALAKDLPNAETTLRRAAARRPVNPRVRQNLALVVG
                     LQGRFAEAETIARAELPPEEAAANVAYLRQMLAHRGSAATPDHGAHAKTGAT"
     gene            complement(967..1938)
                     /locus_tag="VNY79_04230"
                     /pseudo
     CDS             complement(967..1938)
                     /locus_tag="VNY79_04230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007605386.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
     gene            complement(1949..2925)
                     /locus_tag="VNY79_04235"
                     /pseudo
     CDS             complement(1949..2925)
                     /locus_tag="VNY79_04235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027375.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
     gene            complement(2955..3526)
                     /locus_tag="VNY79_04240"
                     /pseudo
     CDS             complement(2955..3526)
                     /locus_tag="VNY79_04240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313631.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase, T2SS/T4P/T4SS family"
BASE COUNT          606 a         1173 c         1154 g          593 t
ORIGIN      
        1 tcgttaactg ctcattaggg ttaacggtct attgctgacg cgcttgccgt gtcagcgcgt
       61 tcggcgccat gcggcccatt tctgtcagcg atcgcgatgc gtttgatcgg atcacgctct
      121 gcacgccggt tcgccgcggc cgctgtcgtc gccgccctcg ccgcggcgac cgctggctgt
      181 cagaccacgc agagcacgcc gaccgcggcc gcgctgccga tcagggccgt ggccgaccgc
      241 tccgacgccg actggcggca ggaccttgcg gtctatggcc agcaatatcg cgccaacccg
      301 ggcaatgtcg acgcggcgct ccactacgcg caggcattgc gcgctaccgg acagcgcgcg
      361 caggcggtcg ccgtcctcga gcgggtctcg ctcgcaaacc cgcgtgacaa gaccgtgctt
      421 ggcgcctacg gccgcgcgct ggccgaggcg ggcaatttca atcaggcgct ggaagtactc
      481 ggccgcgccc attcgcccga ccagcccgac tggcacgtcc tctccgccca gggcgccgtg
      541 ctcgaccaga tgggccgcca cgcggaagcg cagcgctatt acgtcaccgc cctcaagatc
      601 gttcccgagg aaccctcggt gctgtcgaat ctcggcctct cctacgcgct tgccaaggat
      661 ctgccgaacg ccgaaacgac gctgcgccgc gcggcggcac gccggccggt caacccgcgc
      721 gtgcgccaga acctcgcgct cgtcgtcggg ctacagggcc gcttcgcgga agcggagacg
      781 atcgcgcgtg ccgagctccc gccggaagag gcggccgcta atgtcgccta tctgcggcaa
      841 atgctcgcgc atcgcggcag cgcggcgacc ccggaccacg gcgctcacgc gaagaccggc
      901 gccacctgac cctttgggcc gcttgcgtgc gcggccaaca ggtgcccgaa cgcaaacggc
      961 ggcggcctat tgcagctcca tcacccgaat cgcggccgga ccgaggatca cgacgaacag
     1021 caccggcagg aagaacagga tcatcggcac cgtcagcttc ggcggcaagc cggcggcctt
     1081 ctactcggcc tcggacatgc gcatgtcgcg gttctcctga gcgagaaccc gcatcgtggt
     1141 gccgagcggc gtgccatagc gttccgcctg ctgcaaggcg aggcacacgg ccttgacgcc
     1201 ttcgaggccg gtgcgccgcg ccaggttctc gtaggcctgg cggcggtccg gcagaaagga
     1261 caattccgcg gtcgtcagcg ccaattcctc ggcgagcggg atagactggg tgccgatttc
     1321 ctcgctgacc ttgcggaagg acggctcgat cgccattccc gactcgacgc agatcagcag
     1381 cagatcgagc gcatccggga aggcgcgctt gatcgaagcc tggcggcgct gaatctggtt
     1441 tctgaggaac aggttggggc tgagcatgcc gaaataggcg gcgccgatcg agatggcgac
     1501 cttgatcaag ggcggctgat cgaactcgat gacgacgaag acgtagaaca acgacagcac
     1561 cagcatcacc accggcatga ccatgcggaa gaacaggtag gtgacgtacg gcgcctgccc
     1621 gcggtagccc gcctgcagca gcatggtatg cgcttcctcc tggccgaccc atttgctgag
     1681 gttgaagttg tcgacgatcg tcttcatgta ggcgcgcggc gattgccgaa gcgccgctct
     1741 gctgccctgc gccaggcgct cgcgctcgcg ctggcggatc ttctcgcgct cgaaggcgac
     1801 cgccttcatc cgcttggaca aggtatcgtt caccagatag ggcatcgcca gtgtcagcac
     1861 cgtcgcggcg gcggcgatag cggcgaacac cgtagtcaaa aattttggat cgagcagttc
     1921 cataatgagt ctgagcattg atcacgcctt agaaatcgaa gttgatcatc ttgcgcatca
     1981 ctaggatgcc catggtcatc cacagcacgg agccggccag catcacgtgc cccatcgggg
     2041 tcgtccacaa gagctcgatg tattgcgggc tggtgaaata gacgagcgcc atgaccgcga
     2101 tcggcagtgc accgatgatg gtcgccgagg ccttggcctc catggacatg gcctgaatct
     2161 tggcttgcat gcgtttgcgg tcgcgcagga cgcgcgaaag attgcctagc gcttccgaga
     2221 gattgccgcc ggcgcgctga tgcaccgaga tgacgatgcc gaagaaattc gcttccggga
     2281 gtggcatgcg ttcgtagagc ttgagacagg cctcaccgag cgtcagtccg atggtctgcg
     2341 tctcgatgat ggtgcggaat tcactgcgca ccggctcctg ggcggggcgt cggtggcgat
     2401 cagcttgaaa ttgtcgagca gcggcaggcc ggccttgacg ccgcgaacga tgacgtcgac
     2461 ggcgtcgggg aacgtggcga gaaaacgcgc ctcccgccgt ctcttgagga acgacagcag
     2521 ccacagtggc agtcccccgc cggccgcaaa agcaaacccg agcgccgcca gcagtccggc
     2581 gccggtcggc agcgccagaa gaaacgcggc cacgccgagc gcgccggcgg tcagcaggaa
     2641 gcggcgcttc gaccacgtca gtcccgcctg cgtgatgcgt atggcaagcg gcacgcgcct
     2701 cgcgatcttc tgccgctgtt cgatctcctt gagcgtgcct tcgacctgtt cgcggcgcga
     2761 tttttgcgcg gcccgcgtcg gccgcatcgc aatcggctcc gcgcgggcga cgctcgcctt
     2821 gcgccgctcc gcgtgccgtt cgccggaaat gatcgggtag atgaagaccc aggtgacgcc
     2881 gccgacagcg accgccacca ggaagaaaag cgcgtatccg ttcatggcaa ttcgtcgttc
     2941 ccgcaactgc gcggctagcg ctcgatgtcc gctgtatcga gcgcggccgc gagccgctga
     3001 tcctcgccgt agtagcgcgc tcgatcccag aatttcggat ggccgatgcc agtcgaccgg
     3061 tgccgtccga cgatgttgcc gttcgcatcc tcgccgagca ggtcgtagac gaacaggtcc
     3121 tgggtgatga tgacttcgcc ttccatccct aggacctcgg tgatgtgggt gatgcggcgc
     3181 gatccgtcac gcaggcgcgt gccatgcacg atgacgtcga tcgaggcgca gatcatttcg
     3241 cggatggtgc gggagggaag cgcgtagccg cccatcatga tcatcgattc gaggcgcgag
     3301 agcgcctcgc gcgggctgtt ggcgtgcacc gtgcccatgg agccgtcgtg gccggtgttc
     3361 acgcctgcag caggtcgaag gcttcgccgc cgcgcacctc gccgacaatg atccgttccg
     3421 gccgcatgcg caggcagttg cgcaccagat cgcgcatcgt gatctggccc tcgccttcga
     3481 ggttgggcgg ccgcgtttcc aggcgcacca cgtgcggctg ctgcag
//
LOCUS       DATMQB010000133        12843 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1898320, whole genome shotgun sequence.
ACCESSION   DATMQB010000133 DATMQB010000000
VERSION     DATMQB010000133.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 12843)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12843)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12843
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1898320"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..564
                     /locus_tag="VNY79_04245"
     CDS             <1..564
                     /locus_tag="VNY79_04245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016620 - oxidoreductase activity, acting
                     on the aldehyde or oxo group of donors, NAD or NADP as
                     acceptor [Evidence IEA];
                     GO_function: GO:0046983 - protein dimerization activity
                     [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asd/ArgC dimerization domain-containing protein"
                     /protein_id="HWX71688.1"
                     /translation="LIPLLKAKAIDADEIVIDAKSGVTGAGRAAREDMLFAEVSEGFH
                     AYGVGHHRHMAELDQEFSRAAGRDVVVSFTPHLVPMNRGILSTIYVRGLKASAQDLHA
                     LLAKAYANEPFVQVLPFGRLPQTRHVRGSNMTMIGVAADRIAGRAIIGSALDNLTKGA
                     SGQAVQNMNLVLGFPETAGLEQVALFP"
     gene            complement(620..1021)
                     /locus_tag="VNY79_04250"
     CDS             complement(620..1021)
                     /locus_tag="VNY79_04250"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HWX71689.1"
                     /translation="MILLDTHVAIWMIGDERMLGAQSRKIIRSAREQNKLAISAISFW
                     EIALLVAEDRLELRGEASQLRKDLSISGVVELSVTGDIAIGAVELANLHADPADRIIA
                     ATVVAHDAMLMTADSRLLRWRHSVRRQNAHR"
     gene            complement(1018..1248)
                     /locus_tag="VNY79_04255"
     CDS             complement(1018..1248)
                     /locus_tag="VNY79_04255"
                     /inference="COORDINATES: protein motif:HMM:TIGR01552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HWX71690.1"
                     /translation="MTRIVKASEFKAKCLALLDEVERTGDRLVITKKGRAVAELVPHK
                     SPKRSPLGIWKGRVTIKGDIISPLDVKWEALK"
     gene            complement(1333..3114)
                     /gene="phaC"
                     /locus_tag="VNY79_04260"
     CDS             complement(1333..3114)
                     /gene="phaC"
                     /locus_tag="VNY79_04260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0042619 - poly-hydroxybutyrate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I poly(R)-hydroxyalkanoic acid synthase"
                     /protein_id="HWX71691.1"
                     /translation="MKIGAVDVEEFSRNLARLVEEGGRALAAYLKPREEGRKTDGNGE
                     EVAEVVKTLGHVAEYWLADPQRAVELQARLGKAYLDLWASAAKRLAGEEGPPVVAPAP
                     NDKRFADPEWTSNQFFDFLKQAYLLSARWADGMVSDAAGLDPHTKQKAGFYVRQIANA
                     LSPSNFVLTNPELLRETLLSNADNLVRGMRMLAEDIEAGGGDLRIRQSDASMFAVGRN
                     LATTPGKVIFQNDLMQLLQYAPSTATVRKRPLLIVPPWINKFYVLDLTPKNSFIKWCV
                     DQGLTVFCISWVNPDARLAQKTFEDYVREGPLAALDAIKQATGEGKVDAIGYCVGGTL
                     LSVALAAMAAWRDERITSATLFASQVDFTHAGDLKVFVDEEQVKALEERMAQRGYLEG
                     RAMATVFNLLRSNDLLWPYVINNYLKGKSPFPFDLLYWNADATRMPAANHSFYLRNCY
                     LDNRLSKGEVVIGNTPIDLKSIKVPIYNLATREDHIAPAKSVLLGSKFFGGPVRFVLS
                     GSGHIAGVVNPPEKQKYQYWTGAKPRNADLDGWLAKAKEHPGSWWPDWLAWLRKQSSA
                     EAPARVPGDGKLKPIEDAPGSYVKVRD"
     gene            3551..3862
                     /locus_tag="VNY79_04265"
     CDS             3551..3862
                     /locus_tag="VNY79_04265"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71692.1"
                     /translation="MAAAAAMLLSGCSPEVGLPAVHDMPPPRAEAPLSPDQVKQATDE
                     LANERDHMSTAAQRNGQANPTTGKKTVAEARKKPSTPTPSASRAAAPGAGQAPGADAK
                     P"
     gene            3892..5109
                     /locus_tag="VNY79_04270"
     CDS             3892..5109
                     /locus_tag="VNY79_04270"
                     /EC_number="2.6.1.83"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016842955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LL-diaminopimelate aminotransferase"
                     /protein_id="HWX71693.1"
                     /translation="MEDFYRIRRLPPYVFEQVNRAKAAARNGGADIIDLGMGNPDLPA
                     PAHVIEKLKETIGKPRTDRYSASKGIPGLRRAQAAYYERRFGVKLNPETQIVTTLGSK
                     EGFANVAQAITAPGDIIVVPNPTYPIHVFGFLMAGGAIRAVPVEPDAGFFGALERAVK
                     HSIPKPIAVVVCYPSNPAACVADLDFYRDLIAFAKKHALLVLSDIAYAEVYFDGKPPP
                     SVLQVAGAIDVAVEFSSMSKTYSMPGWRIGFAVGNERIIAALARVKSYLDYGAFTPVQ
                     VVATAALNGPDDCIEEMRATYRRRRDALVDSFGRAGWHVPVPRASMFAWAPIPEPFQS
                     LGSVEFSTLLVEKASVAVSPGAGFGEYGEGHVRFALVENEQRIRQAARNIRRFLETGL
                     EMLHNVVPLATRR"
     gene            5144..6466
                     /locus_tag="VNY79_04275"
     CDS             5144..6466
                     /locus_tag="VNY79_04275"
                     /EC_number="1.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004412 - homoserine dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006520 - amino acid metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HWX71694.1"
                     /translation="MAEPLKIGLAGLGTVGTAVVDLLERGRDKLIARCGRPIEVVAVG
                     ARSRSKKRSIDLKKFRWIADPAALAADPAIDVFVEVIGGAGDPARRAVETALAAGKPV
                     VTANKALLARHGHRLAVLAERHQVALNFEASVAGGIPIVKTLRESLNGDAVTRIYGIL
                     NGTCNYILSRMERDRLAFADCLREAQRLGYAEADPSFDVEGHDTAQKLAILASLSFGT
                     KIDEAAVFVEGISSITLADLDAAAELGYRVKLLGVAVRTEAGIEQRVHPTMVPKESAI
                     AQVLGVTNAVTVDADGLAPITLVGPGAGGMATASAVVSDLADIARGVRTPPFGRPAAR
                     MSAIRRAPMQRHEGGYYIRLLARDRPGSAAAIARRLAQQQISIESIVQRQMAKTQSTA
                     APGRSGEPVPVILVTYATTEDAVRKALAAVRRDRVISGRPQVIRIEKN"
     gene            6508..7494
                     /gene="glpX"
                     /locus_tag="VNY79_04280"
     CDS             6508..7494
                     /gene="glpX"
                     /locus_tag="VNY79_04280"
                     /EC_number="3.1.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042132 - fructose 1,6-bisphosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphatase"
                     /protein_id="HWX71695.1"
                     /translation="MASITVPHALMLERILSIEIVRVTERAAVRAARLRGRGDEKAAD
                     QAAVDAMRRELNNLPIDGTVVIGEGEMDEAPMLFIGEKVGTKAGFKVDIAVDPLEGTT
                     LCAKNMPGAIATLAMAEGGTLLHAPDTYMDKIAVGPGYAKGVVDLDAPPEENIRNLAR
                     AKGMPAETITAMILDRPRHADLIAAVRRAGGSVSLITDGDVAGVIHTAEPDKTGIDIY
                     LGIGGAPEGVLAAAALRCIGGQMQCRLVLDTEEKRERAAKMGIKDPRKKYEIEDMVRG
                     DCLFAATGVTDGRMLGGVKFGEGVIETETVVMRSVTGTVRRIKAEHRQLDKF"
     gene            7661..9472
                     /gene="recJ"
                     /locus_tag="VNY79_04285"
     CDS             7661..9472
                     /gene="recJ"
                     /locus_tag="VNY79_04285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008297 - single-stranded DNA
                     exodeoxyribonuclease activity [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HWX71696.1"
                     /translation="MNDGIFLGVESSATGRAWRSRLDERGSARALAIAQRHDLPELLA
                     RILAGRNVEVDAVEAFLDPTIKRTMPDPNVLTAMPEAAARVADAVVRGERVAIFGDYD
                     VDGATSAALLARFLRHAGIDPIIHIPDRLFEGYGPNIEAVRALAGRGATLLVAVDCGT
                     TSIEPLAEAKALDVDVVVIDHHQADEVLPPAVAIVNPNRRDDLSGLGHLAAVGLTFMT
                     VVAVNRVLRSRGFWTEARPEPDLLTLVDDVALGTVADVVPLIGLNRAFVAKGLIALRR
                     RERAGHVSLMDVARLSGPPEAWHLGFLLGPRINAGGRIGRADLGVRLLIEDDPVEAAK
                     IAAELDRLNRERQAIELETVAQAEAEAMAALGLEERGAVVVTAAEGWHPGVVGLVAAR
                     LKEKFGRPAFAIALEPGGIGTGSGRSIVGVDIGRAVCRAVAEGLLTKGGGHAMAAGVT
                     VRKDALAPLRAFLEATLGPDVETARRSHGLLIDGAVSAAGATPDLVALIERAGPFGSG
                     NPEPVIALPAHTIAYAEEVGQAHMRVRLKSADGAAVGGIAFRAAGQKLGAALLESRGR
                     LVHAAGSFAIDRWQGEERVQFRLADIAPAEPIAGSLA"
     gene            complement(9526..10311)
                     /locus_tag="VNY79_04290"
     CDS             complement(9526..10311)
                     /locus_tag="VNY79_04290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HWX71697.1"
                     /translation="MRLPIYQVDAFTDRLFGGNPAAVCPLHAWLPDETMQAIAAENNL
                     AETAFFVPEGAGYALRWFTPTVEVDLCGHATLAAGHVVFRFIEPRRDGVSFRTMKAGT
                     LVVSRSGDMLAMDFPARPAAPVEPPPDLLAALGGAPREVLRARDHLVVYGSAAEVAAL
                     DPDLAALAKVDCWAAIATAPGEDGIDFVSRFFAPAQGVPEDPVTGSSHCTLVPYWAGR
                     LGKTKLEARQLSRRGGELSCALDGDRVSIAGRAVLYLEGQIEV"
     gene            10431..11420
                     /locus_tag="VNY79_04295"
     CDS             10431..11420
                     /locus_tag="VNY79_04295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009208397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX71698.1"
                     /translation="MAKLDLSVAIGDYDRTRPLLDGVVAIDGVDPVYMALTPEEIFFR
                     AFRGAEFDICEMSLSSYTVKTAQGDCPYIAVPAFVSRAFRHTSVYVRTDRVKKPADLK
                     GRKVGVPEYQLTANVWARAFLDDDYGVKPADIHWIRGGIEEPGRPEKLTLNLPAGVRL
                     DNAPESATISALIESGEIDGFIAPRPPALTPHGQAHVGWLFSDPAAVTRDYFKRTGFF
                     PIMHVVGVRRALAERHAWLPGAVLKAFEQAKQAALRQLADTGASRVTLPFLEETLRDV
                     RALMGSDFWPYGVEPNRKVLDYFLSQHHAQGLSARRLSVDELFHPATYETFKV"
     gene            complement(11454..12614)
                     /locus_tag="VNY79_04300"
     CDS             complement(11454..12614)
                     /locus_tag="VNY79_04300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015314720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016846 - carbon-sulfur lyase activity
                     [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019343 - cysteine biosynthetic process via
                     cystathionine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aspartate aminotransferase family
                     protein"
                     /protein_id="HWX71699.1"
                     /translation="MKPSNRLGFATRCVHAGQNNDPTTGAVMTPIYATSTYAQSSPGV
                     HKGFEYARTQNPTRMAFERCVADLEGGTAGFAFASGMAATATVLDSLDKNSHIIVGDD
                     VYGGTRRLFDMVRRQSAGIEATYADLSDAETLRGALRPDTRLIWLETPTNPTLKIIDL
                     ERIAAVARAKRVLTACDNTFASPWTQRPLEYGFDLVMHSTTKYLNGHSDMVGGVVVVG
                     EHAALRERMAFLQNAVGAIQGPFDSFLALRGVKTLALRMERQSASALRIAERLAAHPR
                     ISRVHYPGLASHPHHDLARRQMRAFGAMIAVEVSGSGEDARRFLERCRLFTLAESLGG
                     VESLISLPALMTHASIPAEARAALGINDRLVRISVGIEDTDDLIADLETALG"
     gene            complement(12619..>12843)
                     /locus_tag="VNY79_04305"
     CDS             complement(12619..>12843)
                     /locus_tag="VNY79_04305"
                     /inference="COORDINATES: protein motif:HMM:NF012780.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HWX71700.1"
                     /translation="SDMLGAVLEHSSRAFEHPVKEVMVTRLETISADAPIADLVPLFR
                     RDLVAIVLDGTHFLGIATRLDLINYFRIAR"
BASE COUNT         2169 a         4311 c         4202 g         2161 t
ORIGIN      
        1 ctcatcccgc tcctcaaggc caaggcgatc gatgccgacg agatcgtgat cgacgccaag
       61 tcgggggtca ccggcgccgg cagagcggcg cgtgaggaca tgctgttcgc cgaagtctcc
      121 gagggctttc acgcctacgg cgtcggccat caccgccaca tggccgaact cgaccaggag
      181 ttttcccggg ccgccggacg cgacgtggtc gtgagcttca cgccgcatct cgtgccgatg
      241 aaccgcggca tcctctcgac catttatgtc cgcggcctca aggcgtcggc gcaggatctt
      301 catgcgctgc tggcgaaggc ttatgcgaac gagccgttcg tgcaagtgct gccgttcggc
      361 aggctgccgc agacgcggca cgtgcgcggc tccaacatga ccatgatcgg ggtcgccgcc
      421 gaccgcatcg ccggccgcgc catcatcggc tcggcgctcg acaacctgac caagggcgct
      481 tccggccagg cggtgcagaa catgaacctc gtgctcggct tccccgagac ggcggggctc
      541 gagcaggtcg cgttgtttcc ctagaccggc tgtcgcgccg aagcctttag gaggaacttg
      601 cgcgctcaac ggctgcacgt cacctgtggg cgttctgacg gcggacgcta tgacgccagc
      661 gcagaagcct gctatccgcc gtcatcagca tcgcatcatg agccacgacc gtcgccgcta
      721 tgatgcgatc ggccggatca gcgtgaagat ttgcaagctc gacggcgcca atagcgatgt
      781 ctcccgtcac cgacagttcc acgacgccag agatcgatag atccttgcgc aactgcgaag
      841 cctcgccgcg cagttccagc cgatcctcgg cgacaagcag cgcaatttcc caaaaactga
      901 tcgcgctgat cgccagcttg ttctgttctc gcgccgaccg gataattttg cgactctgcg
      961 ctccaagcat ccgctcgtcg ccgatcatcc agatcgccac gtgagtatcg agaaggatca
     1021 cttgagcgct tcccacttca catcgagtgg ggaaatgatg tcgcccttga tagtcactct
     1081 gcctttccaa atcccgagcg gactgcgttt tggtgacttg tgcggcacga gttccgccac
     1141 cgccctgccc ttcttggtta tgacgaggcg atcgccggtg cgctcgacct catcaagcaa
     1201 agcgagacac ttggccttga attccgaagc tttgacgatg cgcgtcattc gatcgtgacc
     1261 atggtcggtg accatagtca tatagcaaaa gtgcgcattg cgcaatcgtg cccccggcgc
     1321 tcgccgcgga cgtcaatcgc gcactttcac gtagcttccg ggcgcgtcct cgatcggctt
     1381 gagcttgccg tcgccgggaa cgcgggcggg cgcttcggcc gaactctgct tcctgagcca
     1441 agcaagccaa tccggccacc acgagccggg atgctccttc gccttcgcca gccaaccgtc
     1501 aaggtcggca ttgcgcggtt tcgcgccggt ccagtattga tacttctgtt tctccggcgg
     1561 attgaccacg ccggcgatat gcccggaacc cgacaagacg aagcgcaccg gtccgccgaa
     1621 gaatttcgag ccgagcaaca ccgatttcgc cggcgcgatg tggtcctcgc gcgtcgccag
     1681 attgtagatc ggcaccttga tcgatttcag atcgatcggc gtgttgccga tcaccacctc
     1741 gcccttcgac agccggttgt cgagatagca attacgcagg tagaaggaat ggttggcggc
     1801 cggcatgcgg gtggcatccg cattccagta cagcaggtcg aacgggaacg gcgacttgcc
     1861 cttgagatag ttgttgatca cgtagggcca cagcagatca ttcgaccgca gcaggttgaa
     1921 gacggtcgcc atcgccctgc cctcgagata gccgcgctgg gccatccgct cctcgagcgc
     1981 cttgacctgt tcctcgtcga cgaagacctt gagatcgccg gcatgggtga agtcgacctg
     2041 cgaggcgaac agcgtcgccg aggtgatgcg ctcgtcgcgc catgccgcca tggcggcaag
     2101 ggcgacggag agcagcgtgc cgccgacgca gtagccgatg gcgtcgacct taccctcccc
     2161 ggtcgcctgc ttgatggcgt cgagcgcggc gagcggcccc tcgcgtacgt agtcctcgaa
     2221 cgtcttttgc gcgaggcgcg cgtcggggtt gacccaggag atgcagaaga cggttagccc
     2281 ctggtcgacg caccatttga tgaaggaatt cttcggcgtg aggtcgagca cgtagaattt
     2341 gttgatccag ggcggcacga tcagcagcgg gcgcttgcgc acggtcgcgg tcgacggcgc
     2401 gtattgcagc agctgcatga ggtcgttctg gaagatcact ttgccgggcg tcgtcgccag
     2461 attgcggccg acggcgaaca tcgacgcgtc cgactggcga atcctgaggt cgccgccgcc
     2521 ggcttcgatg tcctctgcga gcatgcgcat gccgcgaacg agattgtcgg cattgctgag
     2581 cagcgtctcg cgcagcagtt cgggattggt gagcacgaag ttcgacggcg acaacgcgtt
     2641 ggcgatctgc cgcacgtaga acccggcctt ctgctttgtg tgcgggtcga gcccggcggc
     2701 gtcgctgacc atgccgtcgg cccagcgcgc ggagaggagg tacgcctgct tgaggaagtc
     2761 gaagaactgg ttcgacgtcc attcggggtc ggcgaagcgc ttgtcgttcg gagccggcgc
     2821 gacgaccggc ggcccctcct ccccggcgag ccgcttggcg gcggacgccc acagatcgag
     2881 ataggccttg cccaggcgcg cctgcagctc gacggcgcgt tgcggatcgg ccagccaata
     2941 ttccgcgacg tggccgaggg ttttaacgac ctcggccacc tcctcgccat tgccgtcggt
     3001 cttgcgacct tcctcgcgcg gcttgaggta agcggcgagc gcccggccgc cctcctcgac
     3061 aagccgcgcc agattgcgcg agaactcctc gacgtcgacg gcgccgatct tcatcggttc
     3121 ttgcgatgga gcccgcacga gcgtttcccc gatggctgca acggagccaa aattgcccct
     3181 ttgagcagac atggtcgacg ctggtcacac ccgcaaggcg cgttcagcgt ggtttcgtct
     3241 gcatcccacg gggctctccg gcccgggcac caccgccgct acgcaacacc tgcctgcggc
     3301 gtggtccttg tttcgacata ttaccgcgct acccgcaaaa cctgggtgac ttttctgttg
     3361 gtccttataa gcctttgcgg gaccagtatt tcttagttcc gccgcgaccg ggcaccgcgc
     3421 cggagcaacc aaaaagaaag ccgttcggag caaacgtggc gcctcgtcga aggaatatcg
     3481 ggggtcgaac gtgcacggcc gtggaagcgt gaccaagcgg gcgcctgcaa gcctgaaagg
     3541 agccttggcg atggctgccg cggccgccat gcttttgtcc ggctgctcgc ctgaggtcgg
     3601 ccttccggct gttcacgaca tgccgccgcc gcgggcggaa gcgccgctca gcccggacca
     3661 ggttaagcag gcgacggacg aactggcgaa cgagcgcgac cacatgagca cggcggcgca
     3721 acgcaacggt caagccaatc ccacaacagg caagaagacc gtggcggagg cgcggaaaaa
     3781 gccctctacg cccacgccgt ctgccagccg cgcagccgcg ccgggcgccg ggcaggcccc
     3841 tggtgccgat gccaagccgt gataaaactg aggaaaatcg ccgagcctcc gatggaagat
     3901 ttctaccgta tccgccggct gccgccttac gttttcgagc aggtgaaccg cgccaaggcc
     3961 gcggcccgca atggcggcgc cgacatcatc gatctcggca tgggcaaccc cgatctgccg
     4021 gcgcccgcgc acgtcatcga gaagctcaag gaaacgatcg gcaagccacg caccgaccgc
     4081 tactcagcgt cgaagggcat acccgggctg cgccgcgcgc aggccgctta ctacgagcgc
     4141 cgcttcggcg tgaagctcaa tcctgagacg cagattgtca ccacgctcgg ctcgaaggaa
     4201 ggcttcgcca atgtcgcgca ggcgatcacc gcgccaggcg acatcatcgt cgttcccaac
     4261 cccacctatc cgatccacgt tttcgggttt ctgatggcgg gcggcgccat ccgcgcggtc
     4321 ccggtcgagc ccgacgccgg gtttttcggc gcgctcgagc gcgcggtcaa gcactcgatc
     4381 ccgaagccga tcgcggtcgt cgtctgctat ccgtcgaatc cggctgcctg cgtcgccgat
     4441 ctcgacttct accgcgatct cattgccttt gcgaagaagc atgcgcttct ggtgctgtcg
     4501 gatatcgcct atgccgaggt ctacttcgat ggcaagccgc cgccgtcggt gctgcaggtt
     4561 gccggcgcca tcgatgttgc cgtcgaattc agctcgatgt cgaagaccta ttcgatgccg
     4621 ggctggcgga tcggctttgc cgtcggcaac gagcgcatca tcgcggctct cgcgcgggtg
     4681 aaatcctatc tcgactatgg cgccttcacg ccggtccagg tggtggcgac cgccgcgctt
     4741 aatgggcccg acgattgtat cgaggagatg cgggcgacct atcggcgccg gcgcgacgcg
     4801 ctggtcgatt cgttcggccg cgccggatgg catgtgccgg tgccgcgggc ttcgatgttc
     4861 gcctgggcgc cgatccccga gccgtttcaa tcgctgggca gcgtcgagtt ctccacgctg
     4921 ctggtcgaga aggcgagcgt tgccgtatct cccggagcag gcttcggcga atacggcgag
     4981 ggccatgtgc gcttcgccct ggtggagaac gagcagcgca tccggcaggc ggcccgcaac
     5041 atccggcgct tccttgaaac cggcctggaa atgctgcaca acgtcgtccc tctcgcgaca
     5101 cggcgttagc cgcgcggatc ttcaccccgg actggcggcg tttatggccg aaccgttgaa
     5161 aatcggtctt gccgggctgg ggaccgtcgg tacggccgtg gttgatctcc tggagcgggg
     5221 gcgcgacaag ctgatcgcgc gttgcggccg cccgatcgag gtggtcgcgg tcggcgcccg
     5281 ctcgcgcagc aagaagcgct cgattgatct caagaaattc cgctggatcg ccgacccggc
     5341 ggcgctcgcc gctgatcccg caatcgacgt cttcgtcgag gtcatcggcg gcgccggcga
     5401 tcccgcccgg cgcgcggtgg aaaccgcgct tgccgccggc aagccggttg tcaccgccaa
     5461 caaggcgctg cttgcgcgcc acggccacag gctcgcggtg ctcgccgaac ggcatcaggt
     5521 cgcgctcaat ttcgaggcct cggtcgccgg cggcatcccg atcgtgaaga ccttgcgcga
     5581 aagcctcaat ggcgatgcgg tcacgcgcat ctacggcatc ctcaacggca cctgcaacta
     5641 tatcctctcg cgcatggagc gggaccgtct cgcgtttgcc gattgcctgc gcgaggcgca
     5701 gcgcctcggt tacgcggaag ccgatccatc cttcgatgtc gaagggcacg acaccgcgca
     5761 aaagctcgcc atcctggcga gcctctcgtt cggaaccaag atcgacgaag cggcggtctt
     5821 cgtcgaaggc atctcctcga tcacgctcgc cgatctcgac gccgctgccg agctcggcta
     5881 ccgcgtcaag ctgttgggcg tggcggtgcg caccgaagcg ggaatcgagc agcgcgtgca
     5941 tccgaccatg gtgccgaagg aatccgcgat cgcacaggtc ctgggtgtga ccaacgcggt
     6001 caccgtcgat gccgacggcc tggccccgat caccctggtc gggcccggcg ccggcggcat
     6061 ggcgactgcc tccgcggtcg tttcggacct cgccgatatc gcgcgcgggg tgcgcactcc
     6121 cccgttcggc cgtccggctg cgcgcatgag cgcaatccgc agggcgccga tgcagcgcca
     6181 tgaaggcggg tactacatcc gcctgctagc gcgtgaccgc cccggcagcg ctgccgccat
     6241 tgcacggcgg ctggcgcaac agcagatctc catcgaatcg atcgtgcagc gccaaatggc
     6301 gaaaacgcag agcaccgccg cgcccggccg ttcgggcgag ccggtgccgg tgatcctggt
     6361 cacctacgcg accaccgagg acgcggtccg caaggccctc gctgcggtgc gccgcgaccg
     6421 tgtaatctcc gggcggccgc aggtcatccg gatcgaaaag aactagtggc tgagcgccgg
     6481 ggcgaccggc tggcaaggat gaggacaatg gcctcgatca ctgttccgca cgccctgatg
     6541 ctggaacgca tcctctcgat cgagatcgta cgcgtgaccg aacgggctgc ggtacgggcg
     6601 gcgcggctgc gcgggcgcgg cgacgagaag gccgccgacc aggccgccgt cgatgccatg
     6661 cgccgcgaac tcaacaatct gccgatcgac gggaccgtcg tcatcggcga aggcgagatg
     6721 gatgaggcgc cgatgctgtt catcggcgaa aaggtcggca ccaaggctgg cttcaaggtc
     6781 gacattgcgg tcgacccgct ggagggcacg acgctgtgcg ccaagaacat gccgggcgcc
     6841 atagccaccc tcgccatggc cgaaggcggc acgctcctgc acgcgcccga cacctacatg
     6901 gacaagatcg cggtcggccc cggctacgcc aagggagtgg tcgatctcga cgcgccgccg
     6961 gaggaaaaca tccgcaacct cgccagggcc aaggggatgc ccgccgaaac catcaccgcc
     7021 atgatcctcg atcgcccgcg tcacgccgac ctgatcgcgg cggtgcgccg cgccggcggt
     7081 tcggtgagcc tgatcaccga cggcgacgtc gccggcgtca ttcacaccgc cgaaccggac
     7141 aagaccggaa tcgacatcta tctcggcatc ggcggagcac ccgaaggcgt gctcgcggcg
     7201 gcggcgctgc gctgcatcgg cgggcagatg cagtgccgcc tcgtcctcga caccgaggaa
     7261 aagcgcgagc gcgccgccaa gatgggcatc aaggacccgc gcaagaaata cgagatcgag
     7321 gacatggtgc gcggcgactg cctgttcgcc gcgaccggcg tcaccgacgg ccgcatgctg
     7381 ggcggcgtga aattcggcga gggcgtcatc gagacggaaa ccgtggtcat gcgctctgtc
     7441 accggcactg tgcgccggat caaggccgag caccggcagt tggacaagtt ttaggcctct
     7501 gccggggcgc gcgacgtgcc ccagcccacg cagcacgcgg cgcgtgggcg tggcgggatg
     7561 ccccgccgct tcgccgctcg caatgctggc agcgctctcc atattccaga gattatttta
     7621 atatcgggag cccttcgcta ccgaatcacg cgggcctgct ttgaacgacg gaatctttct
     7681 cggcgtcgaa agctcggcga ccgggcgcgc ttggcgcagc cggctcgacg agcgcggatc
     7741 ggcgcgcgcg ctcgcaatcg cgcagcggca cgaccttccg gagctgctcg cgcgcatcct
     7801 cgccggccgc aacgttgagg tcgatgcggt cgaggccttt ctcgacccga cgatcaagcg
     7861 aacgatgccc gacccgaacg tgctcaccgc catgcccgag gcagccgccc gcgtggccga
     7921 cgcggtcgtg cgcggcgaga gggtcgctat cttcggcgac tacgacgttg acggcgcgac
     7981 ctcggccgca ctgctggcgc gctttctgcg ccacgccggc atcgatccca taatccacat
     8041 tcccgaccgc ctgttcgaag gctatggccc gaatatagag gcggtgcgcg cgctcgccgg
     8101 acgcggcgcc acgctcctgg tcgccgtcga ttgcggcacg acgtcaatcg agccgctggc
     8161 ggaggccaag gcgctcgatg tcgacgtggt cgtgatcgac caccatcagg ccgacgaagt
     8221 gctgccgccc gcggtcgcca tcgtcaatcc aaatcggcgc gacgatctct ccggcctcgg
     8281 ccatctcgcc gcagtcgggc tcaccttcat gaccgtggtg gcggtgaacc gagtgttgcg
     8341 ctcccgcggt ttctggaccg aggcccgccc cgagcccgat ctgctcacgc ttgtcgacga
     8401 cgtggcgctc ggcactgtcg ccgacgtggt gccgcttatt gggctcaatc gcgcgttcgt
     8461 cgccaagggc ctgatcgcgc tgcggcggcg cgagcgcgcc gggcacgtga gcctgatgga
     8521 cgtggcgcgg ctctccggtc cgcccgaagc ctggcatctc ggctttctgc tcggcccgcg
     8581 catcaacgcc ggcggacgaa tcggccgcgc cgacctcggg gtccggctgc tcatcgagga
     8641 tgacccggtc gaagcggcaa agattgccgc ggagctcgac cggctcaacc gcgagcggca
     8701 ggcgatcgaa ctcgagaccg tggcgcaagc cgaagccgag gcgatggccg cgctcggcct
     8761 cgaggaacgc ggggcggtgg tggtcaccgc cgcggagggc tggcatcccg gcgtcgtcgg
     8821 cctcgtggcg gcccgcctca aggaaaaatt cggccggccg gcgttcgcga tcgcgctcga
     8881 acccggcggc atcggcaccg ggtcgggccg ctccatcgtc ggcgttgata tcggccgggc
     8941 ggtgtgccgc gccgtggccg aaggtctact caccaagggc ggcggtcacg ccatggccgc
     9001 gggtgtgacg gtgcgcaagg acgctcttgc gccgctgcgc gcctttcttg aggcaaccct
     9061 cggtcctgat gtggaaacgg cccggcgttc gcacggcctc ctgatcgacg gcgcggtgag
     9121 cgcggcgggc gcgacccccg atctcgttgc gttgatcgag cgcgccggtc ctttcggctc
     9181 tggtaatccc gagcccgtga tcgcgctgcc ggcgcacacg atcgcctatg ccgaagaagt
     9241 cggccaggcg catatgcgcg tgcgactgaa atccgccgac ggcgcggcgg tcggcggcat
     9301 cgccttccgt gccgccggcc aaaagcttgg cgcggcgctc ctcgagagcc gcggccggct
     9361 ggtccacgcc gccggctcct ttgccatcga ccgctggcaa ggcgaggagc gcgtgcaatt
     9421 caggctcgcc gacatcgccc cggccgagcc gatcgcaggc tctctagcgt aggccggaaa
     9481 ctgctgctgc tcagagcact cgcggattga cgcgccgcag gtaggctaca cctcgatctg
     9541 cccttccaaa taaagcacgg cacgcccggc gatgcttacc cggtcgccgt cgagcgcgca
     9601 ggagagctcg ccgccgcgac gcgagagctg gcgcgcttcg agcttggtct tgccgaggcg
     9661 accggcccaa tagggcacaa gcgtgcaatg cgacgagccg gtcaccgggt cttcggggac
     9721 gccttgcgcc ggcgcgaaaa agcgcgagac gaagtcgatg ccgtcttctc ccggagcggt
     9781 cgcgattgcg gcccagcagt ctactttggc gagcgccgcg agatcgggat cgagcgccgc
     9841 gacctccgcg gcgctgccgt agaccacgag atggtcgcgg gcccgcaata cctcgcgcgg
     9901 cgcgccgccc aaggccgcga gcaggtcggg cggcggctcg acgggcgcgg ctggccgcgc
     9961 cggaaaatcc atggcgagca tgtccccgct ccggctgacg acaagcgtcc cggccttcat
    10021 cgtgcgaaag ctcacgccgt cgcgccgcgg ctcgatgaag cgaaagacga cgtggccggc
    10081 ggcgagcgtc gcatgcccgc acaggtcgac ttcgaccgtc ggcgtgaacc agcgcagcgc
    10141 gtagcctgcg ccctcgggca cgaagaatgc cgtctccgcc agattgttct cggctgcgat
    10201 ggcctgcatc gtctcatcag gcagccaggc gtgcagcggg cacaccgccg cgggattgcc
    10261 gccaaacagc ctgtccgtga aggcatcgac ctgatagatc ggcaggcgca tcgttcgtct
    10321 ccgtgcggtg ctcagcgctg cgttgtcgcc caacgtgtgt tggcgcatgt tttgccacga
    10381 tcccgcggcc gcggctacga cgccggcgtc gatgcggtga aaggacgtca atggccaagc
    10441 tcgatctctc cgtcgcgatc ggcgactacg accgcacccg tcccctgctc gacggcgtcg
    10501 tggccatcga cggcgtcgac ccggtgtaca tggcgctcac tccggaagag attttcttcc
    10561 gcgcgtttcg cggcgccgaa ttcgacatct gcgaaatgtc gctgtcgagc tacacggtga
    10621 agactgcgca gggcgattgc ccctacatcg cggttccggc cttcgtctcg cgagcgttcc
    10681 gccacacctc ggtctacgtg cgcaccgacc gtgtgaagaa gcccgccgac ctcaagggcc
    10741 gcaaggtcgg cgtgccggaa taccagctca ccgccaatgt ctgggcgcgc gccttcctcg
    10801 acgacgacta cggcgtcaaa cccgccgaca tccattggat acgcggcggc atcgaggagc
    10861 cgggacggcc ggagaagctt acgctcaacc tgccggccgg cgtgcgcctc gacaacgcac
    10921 ccgagagcgc gacgatttcc gcgctcattg agagcggcga aatcgacggt ttcatcgccc
    10981 cgcggccgcc cgctcttacc ccccacggcc aggcgcacgt cggctggctg ttcagcgatc
    11041 cggccgcggt gaccagggat tatttcaagc gcaccggctt ttttccgatc atgcatgtcg
    11101 tcggcgtgcg ccgcgcgctc gccgagcgcc atgcctggct tcccggtgcg gttctcaagg
    11161 ccttcgaaca ggcgaagcag gcggcgctca ggcaactcgc cgacactggt gcgtcgcggg
    11221 tcacgctgcc gttcctggaa gagacgctcc gcgacgtgcg cgcactgatg ggctccgatt
    11281 tctggcccta tggcgtcgag ccgaaccgca aggtgctcga ctactttctc agccagcatc
    11341 atgcgcaagg tttgtcggcg cggcgactct cggtcgacga gctgtttcac ccggcgacct
    11401 acgagacgtt caaggtctga ttgggtcatt ccccagcgga cgcggcgata tcgctagccg
    11461 agcgccgttt ccagatcggc gatcagatcg tcggtgtctt caatcccgac cgaaatgcgc
    11521 acgaggcgat cgttgatgcc gagtgcggcg cgcgcttcgg ccggtatcga tgcatgggtc
    11581 attaaagccg gcagcgagat caggctttcg accccgccga ggctttcggc gagcgtgaac
    11641 agccggcagc gttcgagaaa acggcgcgca tcctcgccgg aacccgacac ctcgaccgcg
    11701 atcatcgcgc cgaacgcgcg catttgacgt cgcgccagat cgtgatgcgg gtgcgaggcc
    11761 aagcccggat agtgcacgcg ggagatgcgc ggatgcgcgg cgaggcgctc ggcaatgcgt
    11821 agtgccgaag ccgattggcg ttccatgcgc aacgcaagcg tcttcacccc gcgcagcgcc
    11881 aggaatgaat cgaacggccc ctgaatcgca ccgacggcat tttgcagaaa ggccatgcgc
    11941 tcgcgcagcg cagcatgctc acccaccacc acaacgccgc ccaccatgtc agagtggccg
    12001 ttgaggtatt tggtggtcga gtgcatgacc agatcgaagc cgtattcaag cggccgctgc
    12061 gtccagggac tcgcaaaggt gttgtcgcag gcggtgagga cgcgtttggc gcgcgccacg
    12121 gcggcaatgc gttcgaggtc gatgatcttc aaggtcggat tggtcggcgt ctcgagccag
    12181 atcagccgcg tatcgggccg caacgcgcct ctcaacgtct cggcatcgga aaggtccgca
    12241 taggtcgctt cgatgccagc cgattgccgg cgcaccatgt cgaagagccg ccgcgtgccg
    12301 ccgtagacgt cgtcgccgac aatgatgtga gagttcttgt cgaggctgtc gagcacggtc
    12361 gcggtcgcag ccatgccgga agcgaaggcg aaaccggcgg tgccgccttc gagatcggcg
    12421 acgcagcgct cgaacgccat gcgcgtcggg ttttgcgtgc gcgcatattc gaagcccttg
    12481 tggacgcctg ggctcgactg cgcataggtc gatgtcgcgt agatcggcgt catcaccgcc
    12541 ccggtcgtcg gatcgttgtt ttgaccggca tggacgcagc gggtggcgaa gccaagccta
    12601 ttgctgggtt tcattagttc atctcgcaat gcgaaaataa ttgatgagat cgaggcgcgt
    12661 ggcgatgccg agaaaatggg tgccgtcgag gacgatggcg acgagatcgc ggcggaacag
    12721 cggaacgagg tcggcgatcg gcgcgtcggc ggaaatcgtt tcaagccggg tcaccatcac
    12781 ctccttcacc ggatgctcga acgcacgcga agagtgctcg agcacggcgc caagcatgtc
    12841 gct
//
LOCUS       DATMQB010000134         2790 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3138675, whole genome shotgun sequence.
ACCESSION   DATMQB010000134 DATMQB010000000
VERSION     DATMQB010000134.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2790)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2790)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2790
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3138675"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1128)
                     /locus_tag="VNY79_04310"
     CDS             complement(<1..1128)
                     /locus_tag="VNY79_04310"
                     /EC_number="2.3.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013884.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HWX71701.1"
                     /translation="MRGLAAPVVVASHAWRSPWNDPSGSTTTFLYSSAEHVYGGWTTD
                     VLSILGNGAAAVNLFCVISGFVLLQSLTRGPDSNWVNAARFVVARVSRIYPAVLVTIG
                     AFILIFYATGASICSAAAYEPVKLLRNALPLDTEIVGVMWTLRVEMLAIPLFILGFFL
                     LRRFGNVALVILLATLLALATWRVWTGLIDPTLGLALLPFFAVGMLVFGVGKKPWSWI
                     PSGLAAALLIVAIAVMLSVPLLPRFGARPYHIETVCDAYIVGLLAFANLGAVGRFFEH
                     PIVRFYGRISYSFYLINPLTLFAFWHMPEALGQIMQLPIPGILIALTMFLFSVVVTTP
                     IAWLMHKYVERPGVALGRRLAAVQFTEWLPLRPAPADLASPH"
     gene            1346..2203
                     /locus_tag="VNY79_04315"
     CDS             1346..2203
                     /locus_tag="VNY79_04315"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HWX71702.1"
                     /translation="MKPAPFVHHAPKTVDDALANLAEFGPQDGRVLAGGQSLIPMMAF
                     RMARPAHLIDINTVAGLDRLAVESGVLSVGACVRHAAFHRPVVEGPTGTLLSRVVRDI
                     AHYPIRLRGTFCGSLAHADPASEWCLAAVTLGAEIVAMSRRGRRVMAADNFFEGMMAT
                     ALAEDELLLEARLPLLSPDTRFGFYEFSRRAGDYALAMALVTFRLQDGVIVAPRIGVG
                     GAEARPRRMAAAEAVLAGRGPDSESFRAAAEAAADAVEPMEDIHADAEFRLDLVRAVT
                     RRALERAHA"
     gene            2200..>2790
                     /locus_tag="VNY79_04320"
     CDS             2200..>2790
                     /locus_tag="VNY79_04320"
                     /inference="COORDINATES: protein motif:HMM:NF013482.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HWX71703.1"
                     /translation="MNAPTKDSGLAWVGRAIRRVEDPALLGGRGRFTADLPAALRVRF
                     VRSPVAAGRIERIAIPEGANVVTAADLAAVKPIMPALHKFGYVPIAQPVLASGCVRFV
                     GEPIAAALAGSEAQAEDVADAVSVDIAASAAVIDARAALADGAPLVHAQAARNLVVEG
                     KVETPGFAAVQGAAHRLIAVELRSRRQNATPLEGRAG"
BASE COUNT          498 a          922 c          955 g          415 t
ORIGIN      
        1 gtgggggctg gcgaggtccg ccggagcggg gcgcaacggc agccactccg tgaactgaac
       61 cgcggccagg cgccggccga gcgcgacgcc cggccgctcg acgtatttgt gcatcagcca
      121 ggctatcgga gtggtcacga caactgagaa caaaaacatc gtgagggcaa tgagaattcc
      181 cggaatgggc agctgcatga tttggcccag ggcctcgggc atgtgccaga acgcgaacag
      241 ggtcagcgga ttgatcagat aaaagctgta ggagatccgg ccgtagaacc ggacgatcgg
      301 gtgttcgaag aacctgccga cggctcccag attggcaaag gcaagcaagc cgacaatgta
      361 ggcgtcgcag accgtctcga tatggtaggg ccgcgcgcca aagcgtggca gcaaaggcac
      421 cgacagcatt accgcgatgg cgacgatgag gagggccgcc gccaggccgg aggggatcca
      481 cgaccacggc ttttttccca cgccgaatac cagcatgccg acggcgaaaa acggcagcag
      541 cgccagaccg agtgtcggat cgatgagccc ggtccacact cgccacgtcg ccagcgccag
      601 gagtgttgcc agcaggatca ccaacgcgac gtttccgaaa cgccgcaaca gaaaaaatcc
      661 aaggatgaac aagggaatgg cgagcatctc gacccgcaac gtccacatta caccgacgat
      721 ctcggtatcc agcggcaaag cgtttcgtaa aagcttgacg ggctcatacg cggctgccga
      781 gcaaatggaa gcgcccgtcg catagaagat cagtatgaac gcgccgatgg taacaaggac
      841 ggccgggtag atgcgagaga ctcgcgctac aacaaagcgc gcggcgttga cccagttcga
      901 atccggcccg cgcgtcagcg actgcagcag aacgaagccg ctgatgacgc aaaatagatt
      961 gaccgccgcg gctccgttgc caaggatcga cagaacgtcc gtcgtccatc cgccatagac
     1021 gtgctcggcc gacgagtaga ggaacgtcgt ggtgctgccc gacggatcat tccaaggcga
     1081 ccgccacgca tgcgaagcca cgaccaccgg cgcggccagg ccgcgcaagg cctcgaggcg
     1141 cggaaagaac tgatccttcc cgcgtgctgg cgctggcgtg gatatcgtcg cccccgtcgc
     1201 ccagtgaacg gccggtcact ctaacatgca cttcgttgcg ttgtctcttg ttccgggctc
     1261 gggaagcctg cgttgacgag ggcgggcgat ggctgcttag cataccggca aacccgcgtt
     1321 ctcgaccgcc aaagggtctc gcccggtgaa acctgcgccg ttcgtccacc acgcgccgaa
     1381 gacggtcgat gacgcgctgg cgaacctcgc tgaattcggt ccgcaggacg gccgcgtcct
     1441 cgccggcggt caaagcctca tcccgatgat ggcgttccgc atggcgcggc cggcgcatct
     1501 catcgacatc aatacggtcg ccggtctcga tcgcctcgcg gtcgagagcg gcgtgctttc
     1561 ggtcggggcg tgcgtgcgcc atgccgcgtt ccaccgcccg gtggtcgaag gtccgaccgg
     1621 aacgctgctg tcccgtgtcg tgcgcgacat tgcgcactac ccgatccggc tgcgcggtac
     1681 gttttgcggc agcctcgccc acgccgaccc ggcctccgaa tggtgcctgg ccgcggtgac
     1741 gctcggcgcc gagatcgtcg ccatgagccg gcgcggccgc cgcgtcatgg cggccgacaa
     1801 tttctttgaa gggatgatgg cgacggcgtt ggccgaggat gaattgttgc tggaagcgcg
     1861 gctgccattg ctctccccgg atacgcgctt cggcttctac gaattcagcc ggcgcgccgg
     1921 cgactacgcg ctcgcgatgg cgctggtgac cttccggctg caggatggcg tgatcgtcgc
     1981 gccgcggatc ggggtcgggg gtgccgaggc gcggccgcga aggatggccg cggccgaagc
     2041 cgttctcgcc ggccgcgggc ccgactccga gagcttccgg gccgcagccg aggccgccgc
     2101 cgacgcggtc gagccgatgg aagatattca tgcggacgcc gaattccggc tcgacctggt
     2161 gcgcgccgtg acgcggcggg cgctcgaacg ggcgcacgca tgaacgcacc gaccaaggac
     2221 tcggggctcg cctgggtggg ccgcgccatc cgccgggtcg aggatcccgc gttgctcggc
     2281 ggccgcggcc gcttcactgc cgacctgccg gcggcgctgc gcgtgcgttt cgtgcgcagc
     2341 ccggtagccg ccggccgcat cgaacggatc gcgattccgg aaggcgccaa cgtcgtcacc
     2401 gcggccgacc tcgcggctgt gaagccgatc atgccggcgc tgcacaagtt cgggtatgtc
     2461 ccgatcgccc agcccgtcct ggcatcgggc tgcgtgcgct tcgtcggcga gccgatcgcg
     2521 gcggcgctcg ctgggagcga agcgcaggcc gaagacgtcg ccgacgccgt gtcggtcgat
     2581 atcgccgcct ccgcggcggt catcgatgcg cgcgcggcgc tcgccgacgg cgcgccgctc
     2641 gtgcatgcgc aggccgcgcg caacctcgtg gtcgaaggca aggtcgaaac gccgggattt
     2701 gccgctgtgc aaggcgcggc gcatcgtcta atcgccgtcg agctgcgctc gcggcgccag
     2761 aacgcgacgc cgctcgaggg gcgcgccggc
//
LOCUS       DATMQB010000135         6426 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1282784, whole genome shotgun sequence.
ACCESSION   DATMQB010000135 DATMQB010000000
VERSION     DATMQB010000135.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6426)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6426)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6426
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1282784"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..1064)
                     /locus_tag="VNY79_04325"
                     /pseudo
     CDS             complement(1..1064)
                     /locus_tag="VNY79_04325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493885.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            1347..2129
                     /locus_tag="VNY79_04330"
     CDS             1347..2129
                     /locus_tag="VNY79_04330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIM barrel protein"
                     /protein_id="HWX71704.1"
                     /translation="MPRLAANLAFLFTERPLLERFGAAAAAGFSAVELQYPYEVAPAA
                     VKAELARHGLTQLGINTLPGREGESGLAALPGREPDWEAAFARALDYAVAIGGRAIHC
                     LAGCVPPEQRPAAEAVFIRNLARAAEHAAGAGVNLLIEPLNPRDRPDYFVSRVEHAAD
                     IVQRVGAPNLRIQFDFYHVQIVGGDLIRRFEAHLPLVGHVQVAAVPSRREPDEGEVNY
                     PEIFALLDRLGYAGFVGCEYRPRGRTEEGLAWARPYGVVPRG"
     gene            2284..2862
                     /locus_tag="VNY79_04335"
     CDS             2284..2862
                     /locus_tag="VNY79_04335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3040 domain-containing protein"
                     /protein_id="HWX71705.1"
                     /translation="MWGRRDKLAAAPAAEPRSALKQAMHEARVEAAERTSVVVDLRDA
                     EVARLELLSEALDLVFAEIPSEAELFDRGLSRGDTPRLWIDAVAHIAMGRDKRLYRLL
                     HDTRVGRRVLAESYEIPDIVRAVTSYVARRLVERERALDEDPEFIMRIGEQEARRERR
                     RRRWQAAGALLFGFVLGLFALLLAGLLLASRY"
     gene            complement(2914..3795)
                     /locus_tag="VNY79_04340"
     CDS             complement(2914..3795)
                     /locus_tag="VNY79_04340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006018961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HWX71706.1"
                     /translation="MFVLAHLSDLHLAAPPRLAELAGKRGLGFINWHRGRKNIHRVAA
                     LDTLTADLKTLAVDHVAVTGDLVNLSLPDEYRRARAWLDALGTPSDVTVIPGNHDIYV
                     PGALDSPSTFWGDYMRGDNGSGRGAFPFVRRRGDVALIALSSALPTGPLLATGRLGES
                     QLARLAAALDRARALFRIVLIHHPPVSPPRRYLRRLTDAGEFRRVFAEKGAELVLHGH
                     DHRRSLVWLDGPQRPIPAVGAPSASARVPHHGENAAGYNLLRIDGEAGAWRCELVARE
                     RGADGFIREVEWQTLQR"
     gene            complement(3917..4870)
                     /locus_tag="VNY79_04345"
     CDS             complement(3917..4870)
                     /locus_tag="VNY79_04345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin family protein"
                     /protein_id="HWX71707.1"
                     /translation="MKRFADLSEQEVLALAVSNEDEDNRIYHSFADGLRGSYPDTAAM
                     YDKMADEEIGHRDMLLELYRRKFGEFLPLIRRQDVKGFLKRRPLWLNRPLGLDAVRKF
                     AEEMEYETARFYRRAASSADDDAVRDLLRKLAAAEDKHEALARELGAKLEPRARAAED
                     ETARRMFVLQYVQPGLAGLMDGSVSTLAPLFAAAFATHSTWATFLVGLAASIGAGISM
                     GFAEALSDDGSLTGRGAPLVRGVVCGLMTTLGGLGHALPYLIPHFYVATSFAFAVVAV
                     ELAVISWIRTRYMDTPFLQAAFQVLVGGTLVFVAGILIGNS"
     gene            5018..5293
                     /locus_tag="VNY79_04350"
     CDS             5018..5293
                     /locus_tag="VNY79_04350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71708.1"
                     /translation="MKHASPSALGRLVQLLTGIRQFERVKEKSRGVFYCRSKAFLHFH
                     EDPAGLFVDLRIGSDWERFRVDSKDQQARLLRRIRHHLARSSGNHGA"
     gene            5283..5765
                     /locus_tag="VNY79_04355"
     CDS             5283..5765
                     /locus_tag="VNY79_04355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HWX71709.1"
                     /translation="MELDPVRRRVEPAIRRGLHLYWRFARGLTLGVRGLVIDAERRVF
                     LVKHSYVAGWHLPGGGVEPGETLAAALVRELREEGNIELTAPAVLFAIYFNRRISRRD
                     HVALYVARSFRQSAPPRPNHEIIAHGFFAVDSLPAGATGATRQRIDEVFAGRAAAEFW
                     "
     gene            5955..>6426
                     /locus_tag="VNY79_04360"
     CDS             5955..>6426
                     /locus_tag="VNY79_04360"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71710.1"
                     /translation="MQRKILALAAAAALGAAMTTGAMAAHMGGGGGGGGGRGMSMGGG
                     GHAMTMGGGHAMTMGGGHAMTMGGGHAMTMGGARMNTFAVAPHANFVRPGITGNRVVG
                     TWGHPATGAWANRTWAGGNWGHHHHHRHFFVGGGLYAFSGYSYDCYNWPYYSYPY"
BASE COUNT         1054 a         2070 c         2222 g         1080 t
ORIGIN      
        1 gtcgtccggc cagaccttct ggatgatttc catgcccggg tcgtgcccgt gcgagtggat
       61 ggcgacgagc cggccgccgg gaccgagcgc gcgcgacagc gggccgatca cccgcgtcgc
      121 cttgaactcc agcgaggcgc gcgcgcgata gggttgcgag gcgatgacca ggtcgtagtt
      181 ggcgacggtg ccgcccggcc tgggaatgat cgggtcgagc acgaagcggt ggtcgtcgcg
      241 gtagatgacg agcaccaccg ggcgctcgta gatcggattg ccggtgcgcg cgctcacccc
      301 cgctttccag ttgagcgcga ggaacggctc gaggtcgatg atctgctgct cgaaacggtg
      361 ggcggaattg ccggtgagcg gaagctcgtg ccagaccagg ctcgaggcgg cgttcagcga
      421 tttcaccgcg agccagggcg catcggcata ggcgagattg gtgaggatga gcaccgtcgc
      481 cggatgctcg aagaagcggt ccgccatctt ctgcagcgtc agccgcacat cctcgaggct
      541 gatctccttg ccgacgacgt agaacggcat gtgcgtaaag cggtcgtgca tggcacgcat
      601 ggtgcgcacc agcacgctgc cgtcgccgac gccggcgtcg aatacgcgca cagccggcgg
      661 gcgcggatgg atcagggcga gttcgccggc tactcggctc gccacctccc atttctcgct
      721 gcaggtgttg acgaacagga gatatttctg ccggttgtcg aagaagcgga aattgcgctg
      781 cgggtcgccg ggcttgctcg gcgccatgac cggtgcgagc gtcggcgaat tggtgaggcg
      841 cggctcgcgc gcgcgctcga tgacaatggg acgcggcccc tggggcgagt gggcggtcat
      901 gaaattgtgg atgcgctcga gcgtatccgt ggtgatgcgc cgccgccgcg cagccgggcg
      961 gtcaatttcc cgtcgttgac cgctcggcgc ccgaaggtcg actcggcaag cccagcctgc
     1021 cggcaataat ccgagatttc ctggagcagt tgctgggcgt tcatgacgcc gctcctgtgc
     1081 tttcctccgc tctgtgccgg gggcccgagc cgcacggcca aagctttaac ttggaagttt
     1141 ctgtggcgag ggaaccaagg catgccgcaa tcgtcaacca caaaattgcc caccatcaac
     1201 gtgggcagca taatgggaaa tagcccaatg ccgattcgag ggttatcccg tcgatcccct
     1261 gctttccgtc cgaccggctt cggaatggtt ccccgagtgc gttaggagag atggcgcgcc
     1321 gcccaaagcg gtgggagggg gaaacaatgc cgcgtttagc cgccaatctc gcgtttctgt
     1381 tcaccgagcg tccgctgctc gagcgcttcg gcgctgccgc cgccgcgggt ttttccgcgg
     1441 tcgaactgca atacccctat gaggtcgcgc ctgccgccgt gaaggcggag ctggcacgcc
     1501 atggcctgac gcaactcggc atcaacacgc tgcccggccg ggaaggcgaa tccggcctcg
     1561 ccgcattgcc cggccgcgag ccggactggg aggccgcgtt tgcgcgcgcg ctcgactatg
     1621 ccgttgctat cggcgggcgg gcgatccatt gcctcgccgg ctgcgtgccg ccggagcagc
     1681 ggccggcggc ggaagcggtt ttcatccgca atctcgcgcg cgccgcggag cacgctgcgg
     1741 gcgccggcgt gaacctgttg atcgagccac tcaatccgcg cgaccgcccg gattatttcg
     1801 tgagccgcgt ggaacacgcc gccgatatcg tccagcgggt cggcgcgccg aacctgcgca
     1861 ttcaattcga cttctatcac gtacagatcg tcggcggcga cctcatccgc cgcttcgagg
     1921 cgcacctgcc gcttgtcggc cacgttcagg tcgcagccgt gccctcgcgc cgcgagccgg
     1981 acgagggcga ggtgaactat cccgagattt tcgctctgct cgaccggctc ggttatgcgg
     2041 gctttgtcgg ctgcgagtac cgcccgcgcg gacgcaccga ggaggggctc gcctgggcgc
     2101 ggccttacgg cgtcgttccc cgcggctgag cgtgcgcgct ctctgcgggg gttcagttcg
     2161 cgggcgaaac cgccgtagtt tcctaggctt cgacggtccg gcggccttct ttgcgggctg
     2221 gcgttggtgt atcgtcgtgt tggggaccac acaacagctt gggaaccacg aagcagacgg
     2281 gccatgtggg gcagacggga caagttggct gcggctccag ccgccgagcc gcgctcggcg
     2341 ctcaagcagg cgatgcatga ggcgcgggtc gaggcggccg agcgcacgag cgtcgtcgtc
     2401 gatctgcgcg acgccgaggt ggcgcgcctc gaattgctga gcgaggcgct cgatctggtg
     2461 ttcgccgaaa ttccctcgga ggccgagctg ttcgaccgcg gcctgagccg cggcgacacg
     2521 ccgcggctat ggatcgacgc cgtcgcgcat atcgccatgg gccgcgacaa acgcctgtac
     2581 cgcctgctcc acgacacgcg ggtcggccgc cgcgtcctcg ccgagtcgta cgaaatcccc
     2641 gacatcgtcc gcgcggtgac ctcctacgtg gcgcgccggc tcgtcgagcg cgagcgggcg
     2701 ctcgacgagg atcccgaatt catcatgcgc atcggcgagc aggaagcgcg gcgcgagcgg
     2761 cggcggcggc gctggcaggc cgcaggcgcg ctcctgttcg gctttgtcct cggcctgttc
     2821 gcgctgctgc tcgcaggatt gctgctggcg agccgctatt gatttctgct accggcgatc
     2881 gcccggccgc accccgaagt acgcgcgcac gcctcaccgc tgcaatgttt gccattcgac
     2941 ctcgcggatg aacccgtcgg cgccgcgctc gcgcgcgacg agttcgcagc gccaggcccc
     3001 cgcctcgcca tcgatgcgca ggagattgta gccggcggcg ttctcgccgt gatgcgggac
     3061 ccgcgctgag gccgacggcg cgccgactgc ggggatcgga cgctgcggcc cgtcgagcca
     3121 gacgagcgag cgccggtggt cgtgaccgtg cagcacgagc tcggcgccct tttccgcgaa
     3181 cacgcgacga aattcgccgg cgtcggtcag gcggcgcaga tagcggcgcg gcggactcac
     3241 cggcggatga tgaatgagca cgatcctgaa aagcgcgcgg gcgcggtcga gcgccgcggc
     3301 caagcgtgcg agttggctct cgccgagccg gccggtcgcc aacaagggcc ccgtcggcag
     3361 cgccgacgat agcgcgatca gcgccacgtc gccgcgccgg cgcacgaacg ggaacgcgcc
     3421 gcgaccggag ccattgtcgc cgcgcatgta gtcaccccag aacgtcgatg ggctgtccag
     3481 ggctcccggc acatagatgt cgtgattgcc gggaatgacg gtgacgtcgg acggtgtccc
     3541 aagcgcatcg agccaggcgc gcgcgcgcct gtattcgtcc ggcagcgaca ggttgaccag
     3601 atcgccggtc acggcgacgt ggtcgaccgc cagggtcttc aaatcggcgg tcagggtgtc
     3661 gagcgccgcg acgcggtgga tgttcttgcg cccgcggtgc cagttgatga agccgagccc
     3721 gcgcttgccg gcaagctcgg caagccgcgg cggcgccgcc aaatgcagat cggagaggtg
     3781 ggcgagcacg aacatcgcgc cacgatgata cgcgagtcgt gcgggtcaca acggccagcg
     3841 acccgcgcat cgggcatgat ccgaaaaagc gaaaaccgct tttccgcaag gatcacgctc
     3901 tactacagaa gggtggtcat gaattgccga tgaggatgcc ggcgacgaag accagggtgc
     3961 cgccgacgag gacctggaac gccgcctgca ggaacggcgt atccatgtag cgtgtgcgga
     4021 tccacgagat caccgcaagc tcgaccgcga ccaccgcgaa ggcgaagctc gtggcgacat
     4081 agaaatgcgg aatgagatag gggagtgcgt gtccgaggcc gccaagcgtg gtcatcagcc
     4141 cgcaaacgac gccgcgaacc agcggcgcgc cgcggccggt aagcgagccg tcgtcggaca
     4201 atgcctcggc gaatcccatc gagatgccgg cgccgatcga ggccgcgagc ccgacgagaa
     4261 aagtcgccca ggtactgtgg gtggcaaagg ccgcggcaaa gagcggcgcg agcgtcgata
     4321 ccgagccgtc catgaggccg gcgaggccgg gctgcacgta ttgcagcacg aacatgcggc
     4381 gcgcggtctc atcctccgcc gcccgcgcgc gcggctcgag ctttgcgccc agctcgcggg
     4441 caagcgcctc gtgcttgtcc tcggcggcgg cgagcttgcg caagaggtcg cgcaccgcgt
     4501 cgtcgtcggc ggagctcgcg gcgcgtcggt agaaacgcgc agtctcgtat tccatctcct
     4561 cggcgaactt gcgcaccgcg tcgagcccga gcggtcggtt cagccagagc gggcggcgct
     4621 tgagaaaccc cttcacgtcc tggcggcgga tcagcgggag aaactcgccg aacttccggc
     4681 gatagagttc gagcagcatg tcgcgatggc cgatctcctc atccgccatc ttgtcgtaca
     4741 tcgccgccgt gtcagggtat gagccgcgca ggccgtcggc aaatgaatga tagatgcggt
     4801 tgtcctcgtc ctcattggag acggcgagcg ccaagacctc ctgctcgctt aggtcggcga
     4861 aacgtttcaa tggcttgatc ccaatggctg gctggcgcgt atgttagaat gcttctaaac
     4921 taggcgcaag gccacctcaa aatcgcgatc cgagggtgcg gcggccgcgc agatttggca
     4981 ttcttccgaa gagcagtgtc gtttgcgcgg ttacgtcatg aagcacgcga gcccttcagc
     5041 actcggccgg ctggtgcaac tcctcaccgg cattcgtcaa ttcgagcgcg tgaaggagaa
     5101 atcgcgcggc gtgttctatt gccgctcgaa agcgttcctg cattttcacg aggatcctgc
     5161 tggcctgttc gtcgacctgc gcatcggttc ggactgggag cgttttcgcg tcgacagcaa
     5221 ggatcagcag gcgaggctgc tgcgccggat ccgccatcat ctggcaaggt cctcaggcaa
     5281 tcatggagct tgaccccgtt cgccgccggg tcgagccggc gatccggcgc gggctgcatc
     5341 tctattggcg ttttgcgcgc ggactgacgc tcggtgtgcg cggcctcgtc atcgatgcgg
     5401 agcggcgggt cttcctggtc aagcacagct acgttgccgg ctggcatttg ccgggcggcg
     5461 gagtcgagcc cggcgaaacg ctggctgcgg cgctggtgcg ggaattgcgc gaagaaggca
     5521 acatcgaact caccgcgccg gcggtgctgt tcgcgatcta tttcaaccgc cgcatatcgc
     5581 ggcgcgacca cgtggcgctc tatgtcgcac gctcgtttcg ccagagcgcg ccgccgcggc
     5641 cgaaccacga gatcatcgcg cacggcttct tcgctgtcga ttcgctgccc gcgggcgcga
     5701 ccggcgcgac ccgccagcgc atcgatgagg tttttgccgg gcgcgccgcg gccgagttct
     5761 ggtgatggcc ggtgacggca ttagcgtcgt gtcactttct gacagcgatg tcattttcac
     5821 actgccgggt ttgttgctac caagcggtat tcggccgcgt caattggtca tatgcgcaaa
     5881 cgcaacagca accaaattcg cggacggacg tttccttgga tgagcgtctt ggggcgacag
     5941 aaggagagat ttcgatgcag aggaaaatcc ttgcgctcgc cgcggccgca gcgctcggcg
     6001 cggcgatgac gaccggcgcc atggcggcgc acatgggcgg tgggggcgga ggtggtggcg
     6061 gtcgcggcat gagcatgggc ggcggcggcc acgcgatgac catgggcggc ggtcatgcga
     6121 tgaccatggg cggtggccat gcgatgacaa tgggaggcgg ccacgcgatg accatgggtg
     6181 gcgcgcgcat gaacaccttt gccgtagcgc cacacgccaa cttcgtgcgc ccgggcatca
     6241 ccggtaaccg cgttgtcgga acgtggggac atcccgccac cggcgcctgg gcaaaccgca
     6301 cctgggctgg cggcaattgg ggccaccatc accaccaccg ccacttcttc gttggcggcg
     6361 gcctgtatgc cttcagcggc tattcgtatg actgttacaa ctggccctac tacagctatc
     6421 cgtaca
//
LOCUS       DATMQB010000136         2159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_348716, whole genome shotgun sequence.
ACCESSION   DATMQB010000136 DATMQB010000000
VERSION     DATMQB010000136.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_348716"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..551
                     /locus_tag="VNY79_04365"
     CDS             <1..551
                     /locus_tag="VNY79_04365"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HWX71711.1"
                     /translation="ITVGERDCTGLPRHGFPRAGVVRTFQAVRLFRGLTVSENVEIGY
                     VARGFSRREARRRALAILGELKLTEKAHRAAAGLSYGEERRIGLARALAVNPLFLLLD
                     EPAAGLAATEADELRHLIIDIRSKYNCGVLVIEHNMALVMNLCERIHVLDSGRTIATG
                     TPAEIRADAGVRRAYLGPDALQ"
     gene            548..1297
                     /locus_tag="VNY79_04370"
     CDS             548..1297
                     /locus_tag="VNY79_04370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX71712.1"
                     /translation="MTSGAPLLAISGLVVRYGAVAAVREVDLQVDESEIVSIIGPNGA
                     GKTSLILAVAGIIAPAAGTVIFAGRTLGGIALEDVVAQGIALVPEGRHIFASLTVMEN
                     LLLGATVRRDSRAVAADLDRFFAMFPILAERRRQPAGQLSGGEQQQLAIARALLSRPR
                     LLMLDEPSLGLSPMMVDQIYALLSTIRTQGVTILLVEQNAERVFGISNRVCVMSGGKF
                     ALAGDAAEIKSHPRFDAAYFGVHVREAASGP"
     gene            1297..>2159
                     /locus_tag="VNY79_04375"
     CDS             1297..>2159
                     /locus_tag="VNY79_04375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014762595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX71713.1"
                     /translation="MERLVQILADAVSVGSLYALTALGIGLIFGVMRLINFAHGELIT
                     FAAYTLLALFGQPVPIMIFGGIAVAVVLALVTERAAFRPLRNADPTTLLISSFAVSFF
                     LQKLLILVVGSRLKGLDFLPELGRQIEFAGIRLQLLQIVTIIVGIVLLAALTWFLRAT
                     RLGLHMRAAAEDFRMARVLGVRANKVIAVAFALSGILAAAVSCLIVVQTGVVQPRMGL
                     QLVIIAFVGTVIGGLGSLSGAALGGFLVGAATILLQAFLPPDLRAFREAFVFIAVALV
                     LLFRPQGLIPAR"
BASE COUNT          308 a          744 c          685 g          422 t
ORIGIN      
        1 cgatcaccgt cggcgaacgc gattgcacgg gcctgccccg ccacggcttt ccccgcgccg
       61 gcgtggttcg gacctttcag gcggtgcggc tgttccgcgg cctgaccgtg agcgaaaacg
      121 tcgagatcgg ctacgtcgcg cgaggtttca gccgccgcga ggccaggcgg cgcgcccttg
      181 ccatcctcgg cgaactgaaa ctgaccgaga aggcgcatcg tgccgcggcc ggactcagct
      241 acggcgagga acggcgcatc ggccttgccc gggcgctcgc agtcaatccg cttttccttc
      301 tgctagacga accggcggcc ggcctcgctg ccaccgaagc ggacgagttg cgccatctca
      361 tcatcgacat ccggtccaaa tacaattgcg gtgttctggt gatcgagcac aacatggccc
      421 tggtgatgaa cctgtgcgag cgcatccacg tcctcgacag cggcaggacg attgcaaccg
      481 ggacacctgc ggaaatccgc gccgatgccg gcgttcgccg cgcctacctc ggccccgacg
      541 cgctgcaatg acttcgggcg cgccgcttct cgccatctcc ggactcgtcg tgcgctacgg
      601 cgccgtcgcc gccgtccgcg aagtcgacct gcaggtcgac gaaagcgaga tcgtgagcat
      661 catcggcccg aacggcgccg gcaagacctc gctcatcttg gctgtggccg ggatcatcgc
      721 tccggctgcg ggcaccgtga tcttcgccgg cagaacgctc ggcggaatcg cgcttgagga
      781 cgtggtcgca cagggaatcg cgctcgttcc ggaaggccgg cacattttcg ccagcctgac
      841 ggtgatggaa aatctcctgc tcggggcgac ggtccggcgc gacagccgcg ccgtggcggc
      901 ggacctcgac cgcttctttg cgatgtttcc gatcctcgcg gaacggcggc gtcagccggc
      961 tgggcagctt tccggcggcg agcagcagca actcgccatt gcccgggcgc tgctgtcgcg
     1021 accgcggctt ctcatgctcg acgaaccgtc gctcggcctc tctccgatga tggtcgatca
     1081 gatctatgcg ctgctctcga cgatccgcac gcagggcgtg accatcctcc tggtcgagca
     1141 gaacgcggag cgcgtattcg gtatctccaa ccgcgtctgc gtgatgagcg gcggaaagtt
     1201 tgctctcgct ggcgacgctg ccgaaatcaa aagccatccg cgcttcgacg ccgcctattt
     1261 cggcgtgcac gtgcgggagg cggcaagcgg accgtgatgg agcgtctggt ccagatcctg
     1321 gccgatgcag tgagcgtcgg cagcctctac gcgctgaccg cgctgggcat cggcctgatt
     1381 ttcggggtca tgcggctgat caatttcgcc cacggcgaat tgattacctt cgccgcctat
     1441 acgctgctcg cgctattcgg ccaacccgtg cctatcatga ttttcggcgg cattgcggtg
     1501 gcggtggttc tggcactcgt caccgagcgc gccgctttcc gtcccctgcg caacgccgac
     1561 ccgacgacgc ttttaatctc ctcgttcgcg gtgagcttct tcctgcagaa gctcctgatc
     1621 cttgtggtcg gatcgcggct gaaggggctc gacttcctgc ccgagcttgg tcgccagatc
     1681 gagttcgccg gcatccgcct gcaactcctc cagatcgtca ccataatcgt cggcatcgtg
     1741 ctcctcgccg ccctcacctg gttcctgcgg gcgacgcggc ttggcctgca catgcgcgcc
     1801 gccgccgaag actttcgcat ggcgcgggta ttgggcgtgc gggcaaacaa ggtgatcgcc
     1861 gtcgccttcg cgctgagcgg cattctcgct gccgcggttt cctgcctgat tgtcgtgcag
     1921 accggcgtgg tgcagccgcg gatggggctg cagctggtga tcatcgcctt cgtcggcacc
     1981 gtcatcggcg gtctcggcag cctgtccgga gccgcgctcg gcggcttcct cgttggggcg
     2041 gccacgatcc tgctgcaggc tttcctgccg cccgacctgc gcgcctttcg cgaggccttc
     2101 gtgttcatcg ccgtggccct cgttcttctc tttcgaccgc aaggattgat cccggcccg
//
LOCUS       DATMQB010000137        10292 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2212095, whole genome shotgun sequence.
ACCESSION   DATMQB010000137 DATMQB010000000
VERSION     DATMQB010000137.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10292)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10292)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10292
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2212095"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..237
                     /locus_tag="VNY79_04380"
     CDS             <1..237
                     /locus_tag="VNY79_04380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71714.1"
                     /translation="TSIAAALVYALGLPFFDGYRPAVLDEPLHTFAAQINLAAQYSWR
                     VVPSIDVARVKHYVAAYAERAGTELRRANNRSSR"
     gene            complement(311..991)
                     /locus_tag="VNY79_04385"
     CDS             complement(311..991)
                     /locus_tag="VNY79_04385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease T2"
                     /protein_id="HWX71715.1"
                     /translation="MVRSTFRAALAALVLAAAAPASAQDPRQNEPGQFDFYVLALSWS
                     PSFCEAAAERGGSRNASAQCGARPYSFVVHGLWPQYTKGFPEYCQVPAPRLDRGIVSS
                     MLDLMPAPHLIFNEWDRHGTCSGVSPRAYFETVRKARAVVKIPPDYIDLQAPLSVSPA
                     AVGDAFIKANPGLTQDGISVGCDSKRLTEVRLCLSRELQFHDCPEVARRSCRRDQVLM
                     PPLRGGSG"
     gene            1328..1546
                     /locus_tag="VNY79_04390"
     CDS             1328..1546
                     /locus_tag="VNY79_04390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71716.1"
                     /translation="MRTAILASGISLGLLSFAGAMPAAFPLPPPRTVQIHGCHPYYAH
                     DLSGWHRHEKGCALPGFTGGKNRSAVRD"
     gene            1831..2031
                     /locus_tag="VNY79_04395"
     CDS             1831..2031
                     /locus_tag="VNY79_04395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71717.1"
                     /translation="MSIGSALHCLELANTAASLADRAHLLRMAEAWLDLADRATRRPR
                     REAIAPGDHPLVRRTLGAISST"
     gene            2208..2366
                     /locus_tag="VNY79_04400"
     CDS             2208..2366
                     /locus_tag="VNY79_04400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71718.1"
                     /translation="MTDPTGASSEEHVDESLAPDFSDDALELAAETTPINRSSILSTF
                     NDPTQLCC"
     gene            2496..2675
                     /locus_tag="VNY79_04405"
     CDS             2496..2675
                     /locus_tag="VNY79_04405"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71719.1"
                     /translation="MGQMGRAEQYRWFAVRCLEIARTTLDPQTKAAMLQMAQVWSRLA
                     DESESVRNEPPSGCR"
     gene            3030..3242
                     /locus_tag="VNY79_04410"
     CDS             3030..3242
                     /locus_tag="VNY79_04410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71720.1"
                     /translation="MRLLMVAFACGLVTASAHAQGGAAGSAHGKHGRQQPEKGEPQKP
                     KIDDKAYNAALRHIPDRKYDVWQGVR"
     gene            complement(3257..3583)
                     /locus_tag="VNY79_04415"
     CDS             complement(3257..3583)
                     /locus_tag="VNY79_04415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71721.1"
                     /translation="MPACDFAPALDRIISNFHTKEARFWNSQLQIVGIEDIRETAVLP
                     WAAQSVPRRFCSGVALISDGLRHPIYYSIAEDMGMIGMDWGVNFCVIGLDRNWAYEPH
                     CRAAKP"
     gene            4189..4662
                     /locus_tag="VNY79_04420"
     CDS             4189..4662
                     /locus_tag="VNY79_04420"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020607861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HWX71722.1"
                     /translation="MGEVHRLVPSETVFGLQAAGRLMNKIFAPWVQDLSLLAESVEAV
                     RPPGALPDWQPGAVVRLPFSKKNCCDGEVVCSQALMALADTAMVIACSAAWNGYRPMS
                     TIDQTTHFLRPVSFDVIADARVVRIGRNTSFGRVMLLGAADKRPVGMVASAYSML"
     gene            4782..5063
                     /locus_tag="VNY79_04425"
     CDS             4782..5063
                     /locus_tag="VNY79_04425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71723.1"
                     /translation="MLRSFLFVVAFALSVFTGGSAMAGAIFLGPGPWLTGNDTGGIIP
                     YSPAVAGTYREMAAQWCAGWGRLSHITSVHRIYGDYISFVCIDKPWMIH"
     gene            complement(5095..5832)
                     /locus_tag="VNY79_04430"
     CDS             complement(5095..5832)
                     /locus_tag="VNY79_04430"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006364 - rRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HWX71724.1"
                     /translation="MARYDFRSPRLYVEAEFEAGATVALKRAQAHYLGTVLRLRAGDR
                     VLVFNGRDGEWSATIVGERRPAGLRVDTRTRDQTTPADLHYLFAPLKAARLDYVTQKA
                     VEMGASLLQPVLTRHGQITKVNTERMRANAIEAAEQCGILSPPAAAPLIALARLLAER
                     DAGRWLVFCDEDAEVANPVDALSVVPPSPLAVLIGPEGGFAEDERAALLRQPNVVRLS
                     LGPRILRADTAAVAALALVQAVVGDWR"
     gene            6002..6469
                     /locus_tag="VNY79_04435"
     CDS             6002..6469
                     /locus_tag="VNY79_04435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71725.1"
                     /translation="MKRSLAVLLAVGALAAAPGAAPAQTGPVQCNDFLKLRSDAEQRA
                     GAIRAASERKAERKDVCALVQRFTAAEAAVVKFLDANKTWCGVPDQVVQQAKANHEKT
                     LKFRTAVCTEAPATKPRPPSLSDAIGTPTVDSAENTKTGRGTFDTLNGNPLAK"
     gene            6466..7401
                     /gene="ubiA"
                     /locus_tag="VNY79_04440"
     CDS             6466..7401
                     /gene="ubiA"
                     /locus_tag="VNY79_04440"
                     /EC_number="2.5.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008412 - 4-hydroxybenzoate
                     octaprenyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxybenzoate octaprenyltransferase"
                     /protein_id="HWX71726.1"
                     /translation="MSRVAGSVTDATGNWVDTLAPAWTRPYLRLARLDRPIGSWLLLL
                     PCWWSSALAAVAAHRPAPSFAHLALFFVGAFAMRGAGCTWNDIVDRDLDRSVERTRSR
                     PIPSGQVSVFGAAIFLVVQALVGLAVLLAFNVFTIALGAASLAIVAVYPFMKRITYWP
                     QIVLGLAFSWGALMGWAAFFGRLGLPALLLYAGSIAWVIGYDTIYAHQDREDDALVGI
                     KSTALLFGERTKPMLALFYAIAVILIGAAGFAAGAGAIFGFGLLAFAAHLCWQVVRLN
                     IGNPDLCLAVFKSDRDAGLILFAGLLADAGLRRLV"
     gene            complement(7429..8001)
                     /locus_tag="VNY79_04445"
     CDS             complement(7429..8001)
                     /locus_tag="VNY79_04445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015688599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6101 family protein"
                     /protein_id="HWX71727.1"
                     /translation="MEAGRLAAGSSRTPRLDPFSLPVRFAIADAAADEHLRIVDLHRE
                     RVVLHRRVRGMRMALNLPLAAFRGVAIRLAHKANENPTAIAVVLEHGDPAPSLPLYAS
                     SESDDIVAEWRSWGRVLGLPLLVAEGDGSLREPFTRLGAVHIEAAASRRRSSTTVARR
                     RPARLLRRRPGVPTAVPVIRRGEREIIARD"
     gene            8264..9616
                     /locus_tag="VNY79_04450"
     CDS             8264..9616
                     /locus_tag="VNY79_04450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TldD/PmbA family protein"
                     /protein_id="HWX71728.1"
                     /translation="MSSLLDQSAIADFAQRLVTAARRAGADQADALAVRSVSLSVDVR
                     DGAVEESQRSEGDDLGLRVLVGRRQAVVSTNDLKSNGFEALAERAVAMARAAPEDPFA
                     GLADPALLARTTPDLDLIDPDMPGVDVLETRAREAESAGLAVPGVTKSGGAGASAGIA
                     GVVLVTSHGFQGATISSRHGVVMTAIAGDGTGMERDYEFSSALHAADLDFAGTIGRRA
                     GERAVKRLNPRKVATRRVPVVFDSRVANSLVGHLASSVNGAAITRKTSFLRDKLGQRI
                     FPAGIEIIDDPLRPRGLRSRPFDAEGVAGSRRHLVEDGVLKTWLLDCATARELELETT
                     GHAQRSVSSTPSPGATNLHLAAGDKSAEQLIAEIDDGFYVTDMIGMGVNLVTGDYSRG
                     ASGFWIENGECTYPVSEITIAGHLSDMFANLTPARDLVFRYGTNAPTVRVEGLTVAGH
                     "
     gene            9660..>10292
                     /locus_tag="VNY79_04455"
     CDS             9660..>10292
                     /locus_tag="VNY79_04455"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: protein motif:HMM:NF012673.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HWX71729.1"
                     /translation="MREAGKLALSMFQTPIKSWTKAGSSPVCDADVAVDSFLRERLST
                     EGNGVAWLSEESADDPARLAARYVWVVDPIDGTRAYLAGLPDWAISAALVDNGRPVAA
                     CLYAPVTEEFFVAIVDKGAKCNGVTIAASGGASLAQARIAGPKGFLERLAAVAPPFAA
                     MPRLPSLALRLARVAQGTFDVAIAGGNSHDWDLAAADLLVHEAGGAITPFG"
BASE COUNT         1728 a         3402 c         3378 g         1784 t
ORIGIN      
        1 acgtcgatcg cagcggccct agtctacgcc cttgggctgc cgtttttcga cggttaccgg
       61 cccgcggtgc tcgacgagcc actgcacacc ttcgccgccc agatcaacct cgccgcgcag
      121 tactcctggc gggtagtgcc ctcgatcgat gtcgcccgcg tcaaacacta cgttgcagcc
      181 tatgccgagc gcgcgggcac ggagctgcgc cgggccaaca atcgatcctc gcggtgatcg
      241 cgcctattgc cgatcgatcc ggcgccgcgg cggcatcaag gaacctgtcg cgcgcgactg
      301 ctgctgcggc tcagcctgat ccgccgcgca gcggcggcat gagcacctga tcacggcggc
      361 agctccgccg cgcgacctcg gggcagtcgt ggaattgcaa ctccctcgag aggcagagcc
      421 ggacctcggt caatctcttg ctgtcgcagc cgacggaaat gccgtcttgc gtgaggcccg
      481 gattggcctt gatgaacgca tcaccgaccg ctgccgggct gacgctgagc ggcgcctgca
      541 gatcgatata atcgggtggg attttcacga ccgcgcgcgc cttgcgcacg gtctcgaaat
      601 aggcgcgcgg cgaaacgcct gagcacgtgc cgtgacggtc ccattcgttg aagatcaagt
      661 gcggcgcggg catcaggtcg agcatcgagg agacgatgcc gcggtcgagt cgcggcgccg
      721 gaacctggca atactcagga aaaccctttg tgtattgcgg ccacagccca tgcacgacga
      781 aggaataggg ccgcgcgccg cactgggccg aagcgttgcg cgaaccgccc cgctcggcgg
      841 cagcctcaca gaatgacgga gaccaggata gtgccaggac gtagaaatcg aactgcccgg
      901 gctcgttctg ccgcggatcc tgagccgacg ccggcgcagc tgccgcgaga acaagcgcag
      961 cgagcgcggc gcgaaaagtg gacctgacca tcacgaccct ctcccttacg cgtctgattt
     1021 cgaaacagca tatctcggcg atccgaacaa atcaagaaca aaatgtacga aggccttgcc
     1081 ctgggcgctc ggcacgggcc cggcggcagc gcgccgacct cttccaagat gcgcgcggcc
     1141 ggcgccttgg atgaggattt cggagcgtcg agcgctggct cgtccggatc aatgcgtctg
     1201 ctagaccacc gtcgtttgtg ggcaacgcaa caaaggggtg gagcgatccg agctgcgtcg
     1261 tcatccgacc cccttgtcct tgttgcaaaa atgaggtgag ctgaattgcg cgaatgggga
     1321 ggtcgtcatg cgcacggcaa ttctggcatc gggaataagc ctgggcttgc tttccttcgc
     1381 cggcgcaatg ccggcggcgt ttccgcttcc cccgccccgg acggttcaga tacatggatg
     1441 ccatccatat tacgcccatg acctgagcgg ctggcaccgg catgaaaagg gctgcgccct
     1501 ccccggcttc accggcggca agaaccgaag cgccgtgcgc gactaaaaaa gggcgcgctc
     1561 atcggtggtc ctcaaggagc cgctcgaaag agccgctcga cttgcgagga caaatacttg
     1621 gcatctgtcc cagcgccgtt ggctgaaagc gtattgccca aaacttcgtc atcggtacgc
     1681 ggcagcgaac cggctggccc cccaatattt gaagttcccg ggttcctcta gagcgacttc
     1741 ccaagcttcg gggaacgcgt cgcgggttcc tgatttatcc aggcaatcgc gtttccgaat
     1801 tggggaaatg aacccacgtg atcaagcaag atgagcatcg gcagtgccct gcattgtctc
     1861 gagctcgcga acaccgccgc aagcctcgcc gaccgcgcgc acctgctgag gatggccgag
     1921 gcttggctcg atttggcgga ccgcgccacc cggcgaccgc ggcgcgaggc cattgccccc
     1981 ggcgaccacc cgctggtcag aaggaccctc ggcgcgatca gctcgacttg agcggcagat
     2041 tcgccctctt ccaatggcct atgattgacc acgaagagcg cgtaggcacg acctcgccta
     2101 cgctccacgc aaggcatgaa ggccaataga agccccgtcg tcatcgcggc cgctttgtcg
     2161 tagtgtccgg cggaagcttg tgcccatttc gaaaaggagc cgatgccatg accgacccga
     2221 ccggggcgag ttccgaagag cacgttgacg agagcttggc tccagatttc tccgacgatg
     2281 cgcttgagct ggcggcggaa acaacgccga tcaaccgttc cagcatcctc tcgacgttca
     2341 acgacccgac ccagctttgc tgctgagccc gtttcggcct ccgttagcgc cctcggggga
     2401 cgttcttttg gattgtggcg gcgcagtcgg aattcgcggg caagggaacg ttccaccgtt
     2461 ctgccgcgtt gccccctcgc aagagggaat tgcgagtggg ccagatgggg cgtgccgagc
     2521 agtatcgctg gtttgcggtg cggtgcctgg agatcgcccg tacgacgctc gatccccaga
     2581 ccaaggcggc gatgctgcaa atggcccagg tgtggtcgcg ccttgccgac gagagcgaat
     2641 ccgtccgcaa tgagccaccg tcgggctgcc gctagttagg ccttcgcggg cgcttgtgct
     2701 cggcttcgag agctagccgc caccacactt cggccatctg ttcgaggacg gccctgtgct
     2761 gctcgtcctc tgcccttccg gcaagacggc ggcactcctc ggcaaatttt cggtagtccg
     2821 ctggggtttc catgcgggaa caacccccgg gccggatggc ccgttccgga acaaattaag
     2881 cgaaacctac ggaacttttt tgaagggccg ggttcccgcc acaaaatttt gcaatgcaat
     2941 gctggaactt ttccggatcg agaatgccgg agttccagaa tatcggggct cgcccggcgg
     3001 tccgaaggac gtctgccgtg gcgcgaatca tgcggctgct gatggtggcc tttgcgtgcg
     3061 gcctagtgac ggcgagcgct cacgcgcaag gcggcgcagc cggcagcgcg catggaaagc
     3121 atggacgtca gcagcccgag aagggtgaac cgcaaaagcc gaaaatcgac gacaaggcct
     3181 acaacgccgc gctgcgccat attccggaca ggaaatacga cgtctggcag ggcgtgcgct
     3241 gacgccgggg gtgacctcaa ggtttggccg cgcggcaatg cggttcgtac gcccaattgc
     3301 gatcgagccc gatcacgcag aaattgacgc cccaatccat gccgatcatc cccatgtctt
     3361 cggcgatcga gtagtagatc gggtggcgca atccgtcgct gatcagcgca acgccgctgc
     3421 agaaccggcg cggaacagac tgcgcggccc aggggagcac tgccgtctcg cggatgtcct
     3481 cgatgccgac gatctgaagt tgcgaattcc agaagcgggc ttccttggta tggaagttcg
     3541 aaatgatgcg atcgagcgcc ggcgcgaagt cgcaggccgg catgtcgcga tcataacgcg
     3601 ggcccgacag ccagaaattc ttctcaagga agttggcggc ccgaggctgc gagacggaca
     3661 aaaggctaag cgtcaatgcg aacgcaacgc acgcgatccg gccgaacatt gcctttgccc
     3721 ccgtggcccc tttccgcaac ctcaagcaac cgtgccgcgc tcgcctcgcc cggtcaaggc
     3781 acaaaacggc ggcggcggcg ggttgccggg caccgtgact gcgccgccac gctcgcgacc
     3841 gggggcggga ccgggatgcg cagcaggggc gacgccatca cctccagcgc tatcagcgag
     3901 cggacacgcg ttcgaccctg tccacagaaa acccggacac tacacgggtt gaccacagtt
     3961 ttttcgcaac tgtggcgggt taccgcgcta ccggcgccac gatctccctc ctaagctttc
     4021 cacgttgatt cgccggattc gcggggcgtc aggggtccga ccgcggtctg gttctcattt
     4081 cctgcgccag agttgcgcgt cccgcagggc aaagccgtgc gtgcgtcgcc gtttgatcgc
     4141 cttcacgcga agcgatccgc caaggcaact caactccggg gagcggatat gggtgaagtg
     4201 caccggctgg taccctccga aactgttttc ggcctgcagg cggccgggcg cctgatgaac
     4261 aagattttcg cgccgtgggt gcaggatctc tccctgctgg ccgaaagcgt cgaggcggtc
     4321 cgacctcccg gcgcgctccc ggactggcaa cccggcgccg tggtgcggct gccgttttcc
     4381 aagaaaaatt gctgcgacgg cgaggtagtg tgcagccagg cactgatggc gctcgccgac
     4441 actgcgatgg tcattgcctg ttcggccgcc tggaacggct atcgcccgat gagcacgatc
     4501 gatcagacca cgcatttcct gcgaccggtg agtttcgatg tgatcgccga cgcgcgtgtc
     4561 gtgcgcatcg gccgcaacac cagcttcggc cgcgtcatgc tgcttggagc ggccgacaag
     4621 cggccggtcg gcatggtggc gagcgcctat tcgatgctgt gaaatcgccg ccggattttt
     4681 gcggcgccga agcgatcact cccagcgcgc agcgcgcttt caattcccgg cgcgagcccc
     4741 taagctagcg gccctcggtg acgcagcggg aggggctggc gatgttgcgg agttttctct
     4801 ttgtcgttgc tttcgcgctg agcgtgttca ccggcggcag cgcgatggcc ggcgcgatct
     4861 ttctcggccc cggcccgtgg ctcaccggca acgacaccgg cggcatcatt ccctacagcc
     4921 ccgccgtggc cggcacttac cgcgagatgg ccgcccagtg gtgcgccggc tggggccgcc
     4981 tttcgcacat caccagcgtc catcgcatct acggcgacta catcagcttc gtctgcatcg
     5041 acaagccgtg gatgatccac tgatcggacg cggcctgcgc cgctacgctg acattcagcg
     5101 ccaatcgccg accacggcct gaacgagcgc cagcgccgcg accgcggcgg tgtcggcgcg
     5161 taggatgcgt ggaccaagcg agagccggac cacgttcggt tgccggagca gcgcagcgcg
     5221 ctcgtcctcg gcgaaaccgc cttcgggccc aatcagcacg gcaagcggcg acggcggcac
     5281 gacgctgagc gcgtccaccg ggttcgccac ctcggcatct tcgtcgcaaa acacgagcca
     5341 gcggccggcg tcccgctccg ccaggagacg agcgagcgca atcagcggcg ctgcggctgg
     5401 cggcgaaagg atgccacact gctcggcggc ctcgatcgcg ttggcgcgca tacgctcggt
     5461 gttgaccttg gtgatctggc cgtgtcgggt gagcaccggc tgcaggagcg aggcgcccat
     5521 ctcgacggcc ttctgcgtca cgtagtcgag ccgcgccgcc ttgagcggcg cgaacaggta
     5581 gtgcaggtcc gcaggagtgg tctggtcgcg cgtgcgtgtg tcaacgcgga ggccagcggg
     5641 gcgccgctcg ccgacaatcg ttgcgctcca ttcgccgtcg cggccgttga agacgagaac
     5701 ccgatcgcct gccctcagcc gcagcaccgt gccgaggtaa tgcgcctggg cgcgcttgag
     5761 cgcgacggtt gcaccggctt cgaactccgc ctcgacgtag agtcgggggc tccggaaatc
     5821 gtatcgggcc atcggggaaa aaccggcact ttgagcgggc agtcatggag acaaacgcga
     5881 ttcgggtcta ttctatggtg ccggcgggtg cttcggcggg ggatttgccc ccttgtcgcc
     5941 gaaatccacg cgctcttagt gttcggagag tcgggaaaac gactgcacaa aggacttcat
     6001 catgaagcgg agcctcgccg tgttattggc cgttggcgcc ctggccgcag cacccggcgc
     6061 tgcgccggcg cagaccggac cggtgcagtg caacgatttc ctgaagttgc gcagcgatgc
     6121 ggaacagagg gccggggcca tccgcgctgc cagcgagcgc aaggctgagc gcaaggacgt
     6181 ctgcgcgttg gtgcagcgtt tcacggccgc cgaagcggcc gtggtgaaat tcctcgacgc
     6241 caacaagacc tggtgcggcg tgcccgatca agtggtccag caggcgaaag cgaaccacga
     6301 aaaaaccttg aagttccgga ccgcggtctg caccgaggct ccggccacga aaccgcggcc
     6361 gccgtcgctg agcgacgcca tcggcacccc gacggtcgac tcggcggaga acacgaaaac
     6421 tggccgcggc accttcgata cgctcaacgg taatccgctg gcaaaatgag ccgggtggcc
     6481 ggttcggtca ccgacgcgac cggcaactgg gtcgatacgc tcgcgccggc ctggacccgt
     6541 ccatatttgc gccttgcgcg ccttgatcgc ccgatcggct cctggctgtt gctgttgccg
     6601 tgctggtggt cgtcggcgct tgctgcggtc gccgcgcatc gcccggcgcc gagcttcgcg
     6661 cacctcgccc tgttttttgt cggcgccttc gccatgcgcg gcgccggctg cacgtggaat
     6721 gacatcgtcg atcgcgatct cgaccgcagc gtcgagcgga cgcgctcgcg cccaatcccg
     6781 tccgggcagg tcagcgtctt tggggccgcg atcttcctcg tcgtgcaagc gctcgtcggg
     6841 ctggcggtgc tgctcgcctt caacgtcttc accatcgccc tcggcgctgc ctcgctggcg
     6901 atcgtggcgg tctatccgtt catgaagcgc atcacctatt ggccgcagat cgtgctgggc
     6961 ctggcgttct cctggggcgc actgatgggc tgggcggcgt tcttcggccg cctcggtctg
     7021 ccggcgcttc tgctctatgc cgggtcgatc gcctgggtga tcggctacga cacgatctac
     7081 gcgcaccagg atcgggagga cgatgcgctg gtcggcatca agtccaccgc gctgctattc
     7141 ggcgaacgca ccaagccgat gctcgctctg ttctacgcga tcgccgtcat tctcatcggt
     7201 gcggccggct tcgccgccgg cgccggcgcc atcttcgggt tcggccttct cgcctttgcc
     7261 gcacaccttt gctggcaggt ggtgagactc aacatcggca atcccgacct ctgcctcgcc
     7321 gtcttcaagt ccgaccgcga cgccggcctg atcctgttcg cgggcttgct cgccgatgcg
     7381 gggctgcgcc ggctggtctg agacggctgc aggcgcgacc aagtgaactc agtcgcgggc
     7441 gatgatctca cgctcgccgc gacggatgac cggcaccgcc gtcggcacgc ccggccggcg
     7501 gcgcagcagg cgtgcggggc ggcggcgcgc gacggtcgtg ctgctgcggc ggcgcgaggc
     7561 ggctgcttcg atatgcacgg cgccgagccg cgtgaacggc tcgcgcaagc tgccgtcgcc
     7621 ttcggcgacg aggagcggca acccgagcac gcggccccag gaccgccatt cggcgacgat
     7681 gtcgtcgctt tcgctcgatg cgtagagcgg cagcgacggg gccggatcgc cgtgctcgag
     7741 cacgacggcg atagccgtcg gattttcgtt cgctttgtgg gcgaggcgga tggcgacgcc
     7801 gcggaaagcg gcgagcggca gattcagtgc catgcgcatg ccgcgcacgc gccggtgcag
     7861 cactacgcgc tcgcgatgaa gatcaacgat gcgcagatgc tcgtcggcgg ccgcgtcagc
     7921 gattgcgaaa cgcacgggca aggagaaagg gtcgagccgc ggcgtgcggc tcgacccggc
     7981 agcgagcctg ccggcttcca tttgacgccc tcgaaaactg aagctccccc cgggctgtgg
     8041 ccgcccggtt gtcgccagaa tgcccgatcg cggtcgcaat cggcttaaca acgctggtta
     8101 accggcggta ttcgcccgcc gaatgacagc atgattgaca agcgattgcc gcggccgggg
     8161 aaatttgcgc agcgcccgat tcccgggttg aatcgcgccg gcgacgaaca cattttccag
     8221 tttgtccgcg gttttccgct ttctgaatgg cactgcagct cgaatgtcat cgcttctcga
     8281 tcaatccgcc attgctgatt tcgcccaacg cctcgtcacg gccgcgcggc gcgccggcgc
     8341 cgatcaggcc gacgcactcg ccgtgcgttc ggtgtcgctg tcggtagacg tgcgtgacgg
     8401 cgccgtggaa gagtcgcagc gctccgaggg tgacgatctt ggcctgcgcg tcctggtcgg
     8461 ccgccgacag gcggtggttt cgacaaacga cctcaagagc aacgggttcg aggcgctggc
     8521 ggagcgcgcc gtcgccatgg cgcgcgcggc gcctgaagac ccgttcgcgg ggctggccga
     8581 tccggcgctg cttgcgcgga ccacgcccga cctcgacctc atcgatccgg atatgcccgg
     8641 cgtcgatgtg ctcgaaacgc gggcgcgcga agccgaaagt gcagggcttg ccgttcccgg
     8701 tgtcaccaaa tcgggcggcg ccggcgcctc ggccggaatc gccggggtcg tgctggtgac
     8761 cagtcacggc tttcagggcg cgacgatttc ctcgcgtcac ggcgtcgtca tgaccgcgat
     8821 cgccggcgac ggcaccggca tggagcgcga ctacgaattc tcctcggcgc tgcacgccgc
     8881 cgacctcgac tttgccggga ctatcggacg gcgcgcgggc gagcgcgcgg tcaagcgcct
     8941 caatccgcgc aaggtcgcga cccggcgagt gccggtcgtg ttcgattcca gggtggcgaa
     9001 ctcgctcgtc gggcatctgg ccagctccgt caacggcgcc gccattaccc gcaagaccag
     9061 cttcttgcgc gacaagctcg ggcaaaggat ttttccagcg gggatcgaga tcatcgacga
     9121 tccgctgcgg ccgcgcggtt tgcgttcgcg gcccttcgac gccgagggcg tcgccgggag
     9181 ccggcgtcac ctggtcgagg atggcgtgct gaagacgtgg ctccttgatt gcgcgaccgc
     9241 gcgcgagctt gagcttgaaa cgaccggcca cgcccagcgc agcgtgtcct cgaccccctc
     9301 cccgggcgcg accaacctgc atcttgccgc cggggacaaa agcgcggagc agctgatcgc
     9361 cgagatcgat gacggcttct acgtgaccga catgatcggc atgggcgtca atctggtgac
     9421 cggcgactac agccgcggcg cttccggttt ctggatcgag aacggcgaat gcacgtatcc
     9481 ggtcagcgag atcacgatcg ccggacacct ttctgatatg ttcgccaacc ttactccggc
     9541 gcgcgatctc gtctttcgct atggcaccaa cgcgccaacc gtgcgtgtcg agggtctgac
     9601 cgttgccggc cattgaggtc gcggatccgg cacaggcagc cgctcggctc gcggaacacg
     9661 tgcgcgaagc cggcaagctc gcgctctcca tgttccaaac gccaatcaag agctggacga
     9721 aggccggctc ttcgccggtc tgcgatgccg atgtcgccgt cgacagcttt ctccgagaac
     9781 ggttgagcac tgagggaaac ggcgtcgcgt ggctatcgga ggaaagcgcc gacgatccgg
     9841 cgcggctcgc cgcacgctat gtctgggtcg tcgacccgat cgacggcacc cgcgcctatc
     9901 ttgccggcct gccggattgg gccatctccg ccgcgctcgt cgacaacggg cgccccgttg
     9961 cagcctgcct gtatgctccg gtcacggagg aattcttcgt ggcgatcgtc gataaggggg
    10021 cgaagtgtaa cggcgtgacc atcgccgctt cgggcggggc ttcgctggca caggcgcgca
    10081 ttgccggtcc gaagggattc ctcgaacggc tcgcggcagt cgcaccgccg ttcgccgcca
    10141 tgccgcgcct gccttcgctc gcgttgcggc ttgcccgcgt ggcccaggga actttcgatg
    10201 tcgccatcgc cggcggcaac agccacgact gggaccttgc ggcggctgat cttttggtgc
    10261 acgaagcggg cggcgcgata acgcccttcg gg
//
LOCUS       DATMQB010000138         6955 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3760280, whole genome shotgun sequence.
ACCESSION   DATMQB010000138 DATMQB010000000
VERSION     DATMQB010000138.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6955)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6955)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6955
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3760280"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..514)
                     /locus_tag="VNY79_04460"
     CDS             complement(<1..514)
                     /locus_tag="VNY79_04460"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HWX71730.1"
                     /translation="MRKTYGAGYPRTLGALLSRPERDPAAAAVTDAAGTLSRHSFHER
                     VLRAAAGLRAAGVGAGVRVALWLPNSTGYLAAIFACARLGAPAIHVNTRFRAAEVGNL
                     LRRSRAVELVTEWGFAPVDFPSILAALPAQDRPALRCVIGLEPPAGITEVAGLPVLPL
                     YRDATADAGPD"
     gene            719..1369
                     /locus_tag="VNY79_04465"
     CDS             719..1369
                     /locus_tag="VNY79_04465"
                     /inference="COORDINATES: protein motif:HMM:NF013793.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HWX71731.1"
                     /translation="MTGTIITVATMKGGSGKSTLASCLAVHWHLTGRRPTLIDADPQR
                     SIMRLAARERRLGGVSVIEDATEDASKTARRLAAGGLVIIDTPGFRSRTTLDCLAAAD
                     FLLVPVKPSPFDVDRMLDTLSILTERADGRRPLFRCLLTQTTRDSVIARHIRAELAEA
                     GLPVLRSEITNRVAYPEATLWGATPSLISWKGPAAREIAAVADEVDMVLGEQQAAA"
     gene            1366..1968
                     /locus_tag="VNY79_04470"
     CDS             1366..1968
                     /locus_tag="VNY79_04470"
                     /inference="COORDINATES: protein motif:HMM:NF016983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcjF family protein"
                     /protein_id="HWX71732.1"
                     /translation="MKRKQLPKAIMRSDDELRAIAAHAAADEEAPASQPASPTGAFAT
                     EATAFARPAANDQFPVVSIYVDRYAARRRALARRIVERHKTYAAIGGLSPLPILNVAG
                     VTAIIMRMVKQLSGLYEVPFERDRTRSLIVSLIGGAVPTGLGTATASTLAFVLPGHAL
                     VGLGVSAVAAGALTRGIGLVFLDHFESTSMPLGAAEIEHS"
     gene            complement(1993..3399)
                     /locus_tag="VNY79_04475"
     CDS             complement(1993..3399)
                     /locus_tag="VNY79_04475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003530079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HWX71733.1"
                     /translation="MSEPEALFSVLRQSADAQCVAAIERAVREAPDRDLCRVNALTFA
                     AQDGLNEERVIAAFLHAARLGLFELSWNVLCPGCGGVLDAGATLKTLNREEYACGLCA
                     SGYEPILDEMVEVTFTVSSRVRRIAAHSPDTLPEVEYYRQIFWGSGVDLPETLGDSLA
                     AFTIDSIELPPGEKAVLSVQLPSDFVILFDPVTHGAQFIDVKGEPTRERQTLSMVFNK
                     LQTLVGTVELQPGPLRVSLDNQTDRRVLPGLWIAGDRLHDLLGRRRPFLTAKRLLTNQ
                     TFRDIYRTDTLDVDQRLKITSLTFLFTDLKGSTALYERVGDLVAYDLVRQHFRVLHEV
                     VAAEAGAVVKTIGDAVMATFPTPDRALAAALRMREEMARINTERNNEDLLLKIGIHEG
                     PCLAVTLNDHQDYFGQTVNMAARVQGLASSRAIIVTKPVVDDPNAAKILEKSGLHPTM
                     QHAVLRGIGEETMVYEIP"
     gene            complement(3575..5458)
                     /locus_tag="VNY79_04480"
     CDS             complement(3575..5458)
                     /locus_tag="VNY79_04480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HWX71734.1"
                     /translation="MEHPVNRRSLLTSALVALAAQRLPLPGWTRSALAGGTAWRHGVS
                     AFGDLKYPSGFKQFDYVNANAPKGGAARQIALGTYDNFNMVIDGVKGALAVGVDLTYD
                     TLLVAALDEVSSGYGLLAEAVNYPDDFSSASFKLRAEAKWHDGTAVTPEDVIFSFDTL
                     KKLSPQAGANYKHVVKATKTGDREVTFTFDGPGNRSLPQVLGQLTVLPRAWWEGTDKD
                     GKKRDLGSTTLEPPLGSGPYRIKEFTPGRSIAYERVQDYWGHAVNVNIGRDNFDELRF
                     EYFRDGTVALEAFKGDAVDWRIENSAKNWATAYDFPAVTDKRVILEEFPIKNIGMMQA
                     FAFNLRREKFQDPRVRLAFNYAFDFEEMNKQIFFGQYKRIASYFEGTDLAATGLPAGR
                     ELEFLEAVRDKVPADVFKKPYANPVGGNPAAVRGNLHEAVRLLKEAGYDWHDQQLVHG
                     KTGEPFTVELFGANPMFERVFLFYKPSLERLGMNVTVRTVDLAQFENRLRTWDFDITT
                     FAWRETQMPGGELHDYYGSQAADQSGSDNVIGIKNPAVDAMIEQVVLAKNYDDLAAAA
                     KALDRILLWNNYLVPQWSYSKLRTARWDRFGHPDPLPRYGISAFPTLWWWDAEKAAKT
                     GGR"
     gene            5699..>6955
                     /locus_tag="VNY79_04485"
     CDS             5699..>6955
                     /locus_tag="VNY79_04485"
                     /inference="COORDINATES: protein motif:HMM:NF022072.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5939 domain-containing protein"
                     /protein_id="HWX71735.1"
                     /translation="MKSVYRYRKERHFAQPPETIWPFVADSARINEIAGMPAYKVEER
                     ADADGRIHRLASIKYGPLRVKWEEEFGEWQENRWLTQTRHFINGPFGRFIAAAEVYPE
                     GTGSRMVFSAEFECLGVLGLLAKLSGQIGREGDKRLGAIERMIRESETPDHLAGATAR
                     EAAKPAACRRLGTLIADLAGDPASHSLAPKLADFLLHAPIVALRSIRPLSMARFWHAT
                     PEDTVELFLAAQRLGIMVMGWDLLCPRCRGAKARVKHLHELPQGAHCSSCNVDYGRDF
                     TCNVELTFHPGPWLRPLPEGELCLLGQGTTPHVKFQAEVAAHTRKRFAVALRPGPYRF
                     RTVEVGGGADADIAADGMIPEVTASGHDIVLAPSGRKDEIVVNNDTDRPLFFVVEDRN
                     WARDALTGERVVAMPAFRRLCPEQLLR"
BASE COUNT         1166 a         2257 c         2339 g         1193 t
ORIGIN      
        1 cgtcagggcc ggcatcggcg gttgcatcgc ggtaaagcgg cagcaccggc aggccggcga
       61 cctcggtgat gccggcagga ggctcaagcc cgatcacgca gcgcagcgcg gggcgatcct
      121 gcgcgggcag ggcggcgagg atcgagggaa aatcgaccgg cgcgaatccc cattcggtta
      181 ccaactcgac cgcccgcgag cggcgcagaa ggttgccgac ttccgccgca cggaaacggg
      241 tgttgacgtg gatcgcgggc gcgccgagcc gggcacaggc aaagatcgct gcgaggtatc
      301 cggtgctgtt cggcagccac agcgccacgc gcacgccggc gccgacgccg gcagcacgga
      361 gccccgcggc ggcgcgcagc acgcgctcgt ggaaggagtg ccggctcagc gtgcccgcgg
      421 cgtcggttac cgctgcggcc gccggatcac gctcgggccg ggacagcagc gcgcctagcg
      481 tgcgcggata tcccgctcca taggtcttgc gcatcaggag gctccgtcaa cgctggtgaa
      541 tggccccaaa gcgtctggtc gatcaccgcg ttccaggaat tgagtcatga cctttgcaat
      601 gctcgggtgc tgaagcgaga ccgtcgtaaa atggcaaagt tataggcaga tctcgccgaa
      661 tcaaataaca tgctgattcg ggcgaatcac tacgccgggg ttgagcggga ggtcgtgggt
      721 gacgggcacg atcatcacgg tagccaccat gaagggcggc agcggcaaga gcacgctggc
      781 gagctgcctt gcggttcact ggcatctcac cggcaggcgc ccaacgctga tcgacgctga
      841 tccgcagcgc tcgatcatgc ggcttgccgc acgcgaacgg cgcctgggcg gcgtgtcggt
      901 gatcgaggac gcgaccgagg atgcctcgaa gacagcgcgg cgtctcgcgg ccggcggcct
      961 cgtcatcatc gacacgccgg gcttccgctc acggacgacg ctagactgcc tggcggcagc
     1021 ggactttctg ctcgttccgg taaagccgtc gccgttcgat gtcgaccgca tgctggacac
     1081 gctcagcatt ctcaccgagc gcgccgatgg ccggcggccg ctgttccgct gcctgctcac
     1141 acagacgacg cgcgactcgg tcatcgccag gcacatccgg gccgagcttg cggaggccgg
     1201 cctgccggtg ctgcgcagcg agatcacaaa ccgcgtggcc tatcccgagg ccacgctgtg
     1261 gggagcaacc ccaagcctga tcagctggaa aggccctgcc gcgcgcgaga tcgccgccgt
     1321 cgccgacgaa gtcgacatgg tgctcggcga gcagcaggcg gccgcatgaa gcgcaaacag
     1381 ctgcccaaag cgatcatgcg tagcgacgac gagttgcggg cgatcgccgc ccatgcggct
     1441 gccgacgaag aggcacctgc ttcgcagccg gcttcgccaa cgggcgcgtt cgcgacggag
     1501 gccacagcct tcgcgcgacc ggccgcgaac gatcagtttc cagtggtatc gatctatgtc
     1561 gaccgctatg cggcacggcg gcgagccttg gcgcgccgca tcgtcgagcg gcacaagacc
     1621 tatgccgcca tcggcggact gtcgccgctg ccgatcctca acgtcgccgg cgtcaccgcc
     1681 atcatcatgc ggatggtgaa gcagttgagc ggcctctacg aagtgccgtt cgaacgcgat
     1741 cggacacgct cgctgatcgt cagcctgatc ggcggcgccg taccgaccgg tctcgggacc
     1801 gccacggctt cgacgctcgc cttcgtcctt cccggtcacg cgctggtcgg cctcggcgtt
     1861 tccgcggtcg ccgccggcgc tctgacccgc ggcatcggtc tcgtcttcct cgaccacttc
     1921 gagagcacgt cgatgccgct cggtgctgcc gagatcgagc acagctgagc cgatcgacgt
     1981 cgcggcgcgg cgtcagggga tctcgtacac catcgtctcc tcgccgatgc cgcgcagcac
     2041 cgcgtgctgc attgtcggat gcaggcccga cttctcgagg atctttgctg cattcggatc
     2101 gtcgaccacc ggcttggtca cgatgatggc gcgggacgaa gcgagcccct gcacgcgtgc
     2161 ggccatgttc acggtctggc cgaaatagtc ctggtggtcg ttgagcgtga ccgcgaggca
     2221 cggcccctcg tggatgccga ttttgagcag caaatcctca ttgttgcgtt cggtgttgat
     2281 gcgcgccatc tcctcgcgca tgcgcaacgc cgccgccagc gcgcggtcgg gtgtcgggaa
     2341 cgtcgccatc acggcgtcgc cgatcgtctt caccaccgct cccgcctccg ccgccacgac
     2401 ctcgtggaga acgcggaaat gctggcgcac gagatcgtag gccacgagat cgccgacccg
     2461 ctcatagagt gcggtcgagc ctttgaggtc ggtgaacagg aaggtgaggc tggtgatctt
     2521 gagccgctga tcgacgtcga gcgtgtcggt gcggtagatg tcgcggaacg tctggttggt
     2581 gagaagccgc ttggcagtga ggaacggccg ccgccggccg agcagatcat ggaggcggtc
     2641 gccggcgatc cacagcccgg ggagcacgcg gcggtcggtc tgattgtcga gcgacacgcg
     2701 cagcggcccc ggctgcagct cgaccgttcc gaccagcgtc tgcagcttgt tgaacaccat
     2761 cgacagcgtc tgccgctcgc gcgtcggctc gcccttgacg tcgatgaatt gcgcgccgtg
     2821 ggtaactgga tcgaacagga tgacgaaatc gctcggcaac tgcaccgaca gtaccgcctt
     2881 ttcgcccggc ggcagctcga tcgaatcgat cgtaaacgcg gcgaggctgt cccccagggt
     2941 ttccggcagg tcgacgcccg agccccagaa gatctggcgg tagtattcca cttcgggcag
     3001 cgtatcggga ctgtgggcag cgatgcggcg cacgcgcgag cttacggtga aggtgacttc
     3061 caccatctcg tcgaggatcg gctcgtagcc cgaagcgcac agcccgcacg catattcctc
     3121 gcgattgagg gtcttgaggg tcgcgccggc atcgagcacg ccgccgcagc cgggacagag
     3181 cacgttccac gacagctcga acaggccgag ccgcgccgcg tgcaggaagg cggcgatcac
     3241 ccgctcttca ttgaggccat cctgggcggc gaaggtgagc gcgttgacgc ggcagaggtc
     3301 gcgatcgggc gcctcgcgca ccgcgcgctc gatcgcggca acacattggg cgtcggccga
     3361 ctgccgcaac acgctgaaaa gggcttcggg ttcgctcacc gatcgagatc ccgctcacgc
     3421 cgaataggac cctcgatcta ggcattgggc ggcgcggcaa caaggcacgt cggcgccgac
     3481 gcggatcgcg cggttcacag gctattgatc gctccgacag cccgggctgg gttttgtgcg
     3541 gcagtcgccg ttcgcgcctt tgagacgaag gctattagcg gccgccggtc ttcgccgcct
     3601 tttcggcatc ccaccaccac aaggtcggga atgcggagat gccgtatctc ggcagcggat
     3661 ccgggtggcc gaaccgatcc cagcgtgccg tgcgcagctt gctgtagctc cattgcggca
     3721 cgagatagtt gttccatagc aggatgcggt cgagcgcctt ggccgcggca gcgaggtcgt
     3781 cgtagttctt ggcgaggacc acttgttcga tcatcgcatc gaccgcggga tttttgatgc
     3841 cgatcacgtt gtccgagcct gattggtcag ccgcctgcga gccgtaataa tcatgcagct
     3901 cgccacccgg catctgcgtt tcccgccagg cgaaagtggt gatgtcgaag tcccaggtgc
     3961 gcagccggtt ctcaaattgc gccaagtcga ccgtgcgcac cgtcacgttc atgccgaggc
     4021 gctcgagcga gggtttgtag aacaggaaga cgcgctcgaa catcggattg gcgccgaaca
     4081 attcgaccgt gaacggttcc ccggtcttgc cgtggacgag ttgctggtcg tgccagtcat
     4141 aacccgcctc cttgagcagc cgcaccgcct cgtggagatt gccgcgcacc gccgcgggat
     4201 tgccgccgac cggattggcg tagggttttt tgaacacatc ggccggaact ttatcgcgca
     4261 ccgcctccag gaactcgagt tcgcgaccgg cgggcaagcc ggtcgcggca aggtcggtgc
     4321 cttcgaaata gctggcgatg cgtttgtact ggccgaagaa gatctgcttg ttcatctcct
     4381 cgaagtcgaa cgcgtagttg aaggcgagcc gcacgcgcgg gtcctggaat ttctcgcggc
     4441 gcaggttgaa ggcgaacgcc tgcatcatgc cgatattctt gatgggaaat tcctcgagga
     4501 tgacgcgctt gtcggtcacc gccgggaagt cataggcggt ggcccagttc ttggcgctgt
     4561 tctcgatgcg ccagtcgacc gcgtcgccct tgaacgcttc gagcgccacg gtgccgtcgc
     4621 ggaaatattc gaaccgcagc tcatcgaaat tgtcgcggcc gatgttgacg ttgacggcgt
     4681 ggccccaata gtcctgcacc cgctcatagg cgatgctgcg gccgggcgtg aactctttga
     4741 tgcggtaggg gccggagcca agcgggggct cgagcgtggt cgagcccagg tcgcgcttct
     4801 tgccgtcctt gtcggtcccc tcccaccacg ccctgggcag gacggtgagc tgcccgagga
     4861 cctgcggcag ggagcggttg ccgggcccgt cgaacgtgaa ggtgacttcg cgatcgccgg
     4921 tcttcgtcgc cttgacgacg tgcttgtagt tggcgccggc ctgcggactg agtttcttga
     4981 gcgtgtcgaa ggaaaatatc acgtcctcgg gcgtgaccgc ggtgccgtca tgccatttcg
     5041 cttcggcccg cagcttgaac gaagcggagg agaagtcgtc cgggtagttc accgcctcgg
     5101 caaggagccc gtatccgctc gatacttcat cgagcgccgc caccagcaag gtgtcgtagg
     5161 tgagatcgac gccgacggcg agcgcgcctt tcacgccatc gatcaccatg ttgaagttgt
     5221 cgtaggtgcc gagcgcgatc tgccgcgccg ccccgccttt gggcgcattg gcgttgacat
     5281 agtcgaactg cttgaagccg gatggatatt tcaggtcacc gaacgccgac acgccgtgcc
     5341 gccacgccgt ccccccggcc agcgcgcttc gcgtccagcc gggtagcggg agccgctgcg
     5401 cggccaaagc gacaagggcg gaggtgagca aggatcgccg gttcacgggg tgctccatca
     5461 agcggggccg ggccggcatc gtttgtggcg tcgatgccgc ggtaccacag cttgcgcgat
     5521 tttgctcatg gcgcgcaagc ctttatcgca tcgaactttt ccggaacgac ggggagccgc
     5581 ctggagccgg accccggcgc cggcggcgcg ggcaggcgcc ccggcgaaac cttcagcccg
     5641 ccttgacgta ctttctacat tgccgagatt cgcaccgccc ggtctggaaa tgctgcgcat
     5701 gaagagcgtc tatcgctacc gcaaggaacg gcacttcgct cagccgccgg agacgatctg
     5761 gccttttgtc gcggatagcg cgcgcatcaa cgagatcgcc ggcatgccgg catacaaggt
     5821 cgaggagcgc gccgatgctg atggccgcat ccaccgcctc gccagcatca aatacggtcc
     5881 gctacgggtg aaatgggagg aggagttcgg cgagtggcag gagaaccgct ggctgacgca
     5941 gacccgccat ttcatcaacg gcccgttcgg ccgcttcatt gccgcggccg aggtttatcc
     6001 ggaaggaacc ggaagccgga tggtcttctc cgccgagttc gagtgcctcg gcgtgctggg
     6061 attgttggcg aagttgtccg ggcagatcgg gcgcgaaggc gacaaacgcc tcggcgccat
     6121 cgagcggatg atccgcgagt cggaaacgcc ggaccatctg gccggcgcca ccgcgcgtga
     6181 agccgcaaaa ccggccgcgt gccgccgcct cggaacgctg atcgccgacc ttgctggcga
     6241 tccggcgagc cacagccttg cgcctaagct cgccgacttt ctgctccatg cgccgatagt
     6301 ggccttgcgc agcattcgcc cgctgtcgat ggcgcgattt tggcacgcga cgccggagga
     6361 caccgtcgag ctgtttctcg ccgcgcaacg cctcggtatc atggtcatgg gctgggattt
     6421 gctgtgcccg cgctgccgcg gggccaaggc gcgggtcaag cacctgcacg agctgccgca
     6481 aggcgcgcat tgctcatcgt gcaatgtaga ctacggacgc gatttcacct gcaatgtgga
     6541 gctgacgttc catcccgggc cgtggctgcg gccgctgccg gagggcgagc tgtgcctgct
     6601 cgggcagggc acgacaccgc acgtcaagtt ccaggcggaa gtcgcagcgc atacgcgcaa
     6661 gcgcttcgcc gtcgcgttgc ggccggggcc ttaccgcttc cgcacggtgg aagtcggcgg
     6721 cggcgcggat gccgacatcg ccgccgacgg gatgatcccc gaggtgaccg cgagcggcca
     6781 cgacatcgtg ttggcgccgt ccggccgcaa ggacgagatc gtcgtcaaca acgacaccga
     6841 tcggccgctg ttcttcgtcg tcgaggaccg caactgggcg cgggacgcgc tgaccgggga
     6901 acgcgtggtc gccatgccgg ccttccggcg gctctgtccg gaacagctgt tgcgg
//
LOCUS       DATMQB010000139         2872 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2519326, whole genome shotgun sequence.
ACCESSION   DATMQB010000139 DATMQB010000000
VERSION     DATMQB010000139.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2872)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2872)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2872
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2519326"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..435)
                     /locus_tag="VNY79_04490"
     CDS             complement(<1..435)
                     /locus_tag="VNY79_04490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HWX71736.1"
                     /translation="MSTAMTFADPRLARLDGFRVEIDHERERADVILDRPPFNIIEMP
                     QREQLRLVFEAIDEDSRVRIIVLRATGEHFSSGGNIRGFLEASPEHLSKLAWNIAAPA
                     RCAKPVIAANRGYCFGVGFEISLACDFRIASETCFYALPEQRL"
     gene            complement(444..2002)
                     /locus_tag="VNY79_04495"
                     /pseudo
     CDS             complement(444..2002)
                     /locus_tag="VNY79_04495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471329.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
     gene            complement(1995..2504)
                     /locus_tag="VNY79_04500"
     CDS             complement(1995..2504)
                     /locus_tag="VNY79_04500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009449991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HWX71737.1"
                     /translation="MPHLSAGWLHRVSFTLNGRTVSGQAEPRMLLSDFIRHVLGATGT
                     HVGCEHGVCGACTVQIDGAPARSCLALAVQVEGADIRTVEGLAPAADRLSPLQEAFRE
                     QFGLQCGFCTPGILMSLEALLRERPEASEPEIRAFLSGHLCRCTGYGSIVRAALEAAR
                     KGREERGHA"
     gene            complement(2492..>2872)
                     /locus_tag="VNY79_04505"
     CDS             complement(2492..>2872)
                     /locus_tag="VNY79_04505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012331237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon monoxide dehydrogenase"
                     /protein_id="HWX71738.1"
                     /translation="ETFFTGMMTTDLRDDELIEAVRFPAARAGTGYAFREIARRHGDF
                     AIVACAAMVDAVSARLAVGGVADRPMARELPLPGDPALDDALDAFAWDLDARDDLHAT
                     AAYRRQLVRRIGRQTLETAARCRT"
BASE COUNT          504 a          946 c          982 g          440 t
ORIGIN      
        1 gagccgctgc tccggcaggg cgtagaagca ggtctccgag gcgatgcgga aatcgcaggc
       61 gagcgaaatc tcgaacccga cgccgaagca atagccgcgg ttcgcggcga tcaccggctt
      121 ggcgcaccgc gccggcgctg cgatgttcca cgcgagtttg gaaagatgct cgggggaggc
      181 ttccaaaaag cctctgatat tgccgccgct ggaaaaatgc tcgccggtgg cgcgcagcac
      241 gatgatccgt acccgcgaat cctcgtcgat cgcttcgaac acgaggcgca attgctcgcg
      301 ctgcggcatc tcgatgatgt tgaatggcgg ccggtcgagg atcacatcgg cccgctcgcg
      361 ctcgtggtcg atctcgaccc ggaatccgtc gaggcgcgcc aaccgcggat cggcaaaagt
      421 catggccgta ctcatactct tgctcatact gtcgttccct gctggtcgct catggcgccg
      481 ccgggctccg gctgatagtc gccggcgaca agcttgcggc gcaaaagctt gccgaccgga
      541 gatttcggga tctcggcgac gaacacgtag cgacgcgggc gcttgaagtc ggacagagcg
      601 gacttccggc agaaggcgtc aagctcgccg gcctcgaccg ccacgcgccg cttgacgaag
      661 gcacagacgg tcttgcccca gcgctcatgc ggcaggcccg cgacggcgac ctcggatact
      721 gccgggtgca acgacaggca gctctcgatt tccgccggcg agacgttctc gccgccggtg
      781 atgatcatgt cgtcgacccg gccggtgacg aagaggtcgc cgtcggcatc gatcatcccg
      841 gtatcgccgg tgaaatacca tccgtcgcgg atcgccgcgg cgtcggcgtc gggccggcgc
      901 caatagccct cgaacgattc gtctccggtc atcagcgcga tgatctcgcc ctcccggccg
      961 acgggagcgc gctcgtcggc cgagcgggcg ccgaggcgga ccacgcggat cgactggttg
     1021 atgccggcgc ggccggcgga gccgggcttg gcggcggcgt tctgcttgat cgtcaaggtg
     1081 tagatctcgg agctgccata gtgattgacg aagaggtccg ggcgaaacgc cgcctcgagc
     1141 tttctcagca gcgcatcggt catcggtgcg ccggcgaagc cgagcttgcg cactgagctc
     1201 acgtcggtac cggcaaacag cggatgatgc acgaggtcat ggtagagcgt cggcaccagg
     1261 tagagattgg agatgcgctc gccggcaatg agcgccagcg cgcgctgcgc gtcgaaccgc
     1321 gcaggcagac gaacgtgccg ccgacgagcg acatggcgag cagcgagcga acgcccatcg
     1381 tgtggtatag cggcatgacg cccagcgtgc gctcgccgcg ggagtagagg ttctgcgcga
     1441 catgggcgac cgcggcggcc cgctcggccc ggtgccgtcg gggtactccc ttgggacgtg
     1501 aggtcgtccc cgacgtgtag agcatcagcg accaggcctc ggcgttcgcg cgcggcttcg
     1561 cggcggcgcc tttcttgtca agcaggcggg caaaatcgag gtccggcgaa tccgcaacgg
     1621 ccacagcgat gcgatcaagg cgcctcgcgt gctgcgccgc ggtcaatgcc ggtgcggaaa
     1681 catcctggta gacgatcgcg cgggcttcgg cattctcgat gcagaaatcg atctcctcac
     1741 ccgtcgcgcg ccagttcacg ggcgtgatga tgatgccagc gaactggcag gcccagtgga
     1801 tggttgctgc ctgccagcaa ttctgcagca cggtgaggag atgatcgccg ggctcgagac
     1861 cgagctcgtc gaaggcggca acaagcgatg aaatcttgcc gtaccattgc cgataggtga
     1921 gccggacggc gccgtcgacg acggccggtc cctcgggatc gcgctcgacg ctcgccacaa
     1981 agctggtccc gagatcaagc atggccgcgt tcctcgcgcc ccttgcgtgc cgcctcaagt
     2041 gccgctcgca cgatcgaacc gtagccggtg cagcggcaca aatggccgga aagaaacgcg
     2101 cggatttcgg gctcgctcgc ttccggccgt tcgcgcaaca acgcctcgag cgacatcaga
     2161 atacccggcg tgcagaagcc gcactgcaat ccgaactgct cgcgaaaagc ctcctgcaac
     2221 ggtgaaagac gatccgccgc gggcgccaag ccttcgacgg tacgaatgtc cgccccttcc
     2281 acctggaccg caagggcgag gcaggagcgg gccggcgccc cgtcgatctg caccgtgcag
     2341 gcgccgcaga cgccgtgctc gcagcctacg tgcgtaccgg tcgcgccgag cacgtggcga
     2401 atgaaatcgc tgagcagcat gcgcggctcc gcctggccgg aaacggtccg gccgttgagc
     2461 gtgaagctca cgcggtgcag ccagcctgcg ctcaggtgcg gcatcgagcg gccgtctcca
     2521 gcgtttgccg gccgatgcgc cgcaccaatt ggcgccggta ggcggcggtg gcatgcaggt
     2581 cgtcgcgggc gtcgaggtcc caggcgaaag cgtcgagcgc gtcatcgagg gcgggatcgc
     2641 ccggcaatgg cagttcgcgc gccatcggcc ggtcggcaac accgccgacc gcgagccgcg
     2701 ccgacacggc atccaccatt gcggcgcagg ccacgatggc gaaatcgccg tgccgccgcg
     2761 cgatctcgcg gaatgcgtag ccggtaccgg cgcgggcggc gggaaaccgc acggcttcga
     2821 tcagctcgtc atcgcgcaga tcggtcgtca tcattccggt gaagaacgtc tc
//
LOCUS       DATMQB010000140        10380 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2212998, whole genome shotgun sequence.
ACCESSION   DATMQB010000140 DATMQB010000000
VERSION     DATMQB010000140.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10380
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2212998"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..423)
                     /locus_tag="VNY79_04510"
     CDS             complement(<1..423)
                     /locus_tag="VNY79_04510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory UreF family protein"
                     /protein_id="HWX71739.1"
                     /translation="MDTAALYRLMAWLSPAYPIGAFSYSTGIEWAVEAGDITNAETLR
                     TWLAVMLGEGGGFADGVFFAHAHRAAAADDSGALRAVAELAAAFVPSKERFLETTAQG
                     RAFLEATRAAWPCPAIACLDNAWDGPVALPVAAGVACAG"
     gene            complement(551..1045)
                     /locus_tag="VNY79_04515"
     CDS             complement(551..1045)
                     /locus_tag="VNY79_04515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreE"
                     /protein_id="HWX71740.1"
                     /translation="MSPQMKRANAVKSAGQWDDASAVDRVTLDAQERHRRRIVLTGER
                     GTTFLLDLPQATALRDGDGLVLEDGAIVRVTGRVEPLVEIAAADAHELARLAWHIGNR
                     HVDVEIVGDRLRLRRDHVIEDMLRGLGARLSPMEAPFDPEHGAYEQHRGHTHRGDHHG
                     HDHD"
     gene            1157..2326
                     /locus_tag="VNY79_04520"
     CDS             1157..2326
                     /locus_tag="VNY79_04520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase domain-containing protein"
                     /protein_id="HWX71741.1"
                     /translation="MTIKGKAYIAGAFEHPTRHAPDKTVAQLHAEVALGALADAGLTR
                     ADVDGYFCSGDAPGPGPASMAEYMNLKLRHAESTELGGASYIVLASHAAEAIAAGKCD
                     VALVTLAGRPRSEGMATGTAPRPRDPNQPEGGWEGPYAITTANAYAMGAMRHMHEYGT
                     TGEQLAWVKVAASHHAQYNPHAMLPEIVTVEDVVNSPMIASPLHRLDCCVISDGGGAI
                     VIVRPEIAKKLKRPLVKIIGAGEAVKHLAAGTFDITTSGAARSGPIAFAEAGVTPADI
                     KYASIYDSFTITVIIQLEDLGFCAKGAGGKFVADGNLISGTGKLPFNTDGGGLCNNHP
                     ANRGSMTKVIEAVRQLRGEAHPAVQVKNCDLALAQGTGFLLATRHGSGTLIMERE"
     gene            2331..2714
                     /locus_tag="VNY79_04525"
     CDS             2331..2714
                     /locus_tag="VNY79_04525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold domain-containing protein"
                     /protein_id="HWX71742.1"
                     /translation="MARKITPPAVNPETKPFWDAAREGRFLVPFCAACGKAHWYPRAI
                     CPFCAGDKVEWRKASGKGTIYTFSVMRRVKEPYAIAHVTLAEGPTMLTNIVNCDFDKL
                     HIGQPVAVVFQETEGGPPVPMFKPT"
     gene            2734..3414
                     /locus_tag="VNY79_04530"
     CDS             2734..3414
                     /locus_tag="VNY79_04530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009756329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit A"
                     /protein_id="HWX71743.1"
                     /translation="MHKIVQSMAEAMAGIRDGSVVLLGGFGSIGLPYALVEGLIEQGA
                     KDLTVVANNAGVGRVGLARLLDAGRVRKIICSYPRTADPAAFLKAYRAGRVELEVMPQ
                     GTMAERMRAAGAGIPAFYTPTSVGTKLAEGKEVREFAGRQYVLEEALPGDVALIECWE
                     ADRWGNLTYRSSARNFNPVMAMAAKLTIAQAQHIVALGALDPERVVTPGIFVTRVVHV
                     PYGEPTIT"
     gene            3424..4101
                     /locus_tag="VNY79_04535"
     CDS             3424..4101
                     /locus_tag="VNY79_04535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009756330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacid CoA-transferase subunit B"
                     /protein_id="HWX71744.1"
                     /translation="MNVNASANVLAACKPWTRTEIAARAAHDIPEGFYVNLGIGIPVL
                     VADHLPADREIVIQSENGVLGMGPAPEPDKINRWLTNAGKQYVTLLPGGSYMHHADSF
                     ALIRGGHLDLCVLGAFQVAENGDLANWATSDSDHTPAVGGAMDLAAGAQRIWVLMEHT
                     TKNGESRLKRRCSYPLTAPGVVKRVYTNLAVLDVTDEGFVVRDMLPGLTLEALQDVTE
                     ARLRMAN"
     gene            complement(4196..5548)
                     /locus_tag="VNY79_04540"
     CDS             complement(4196..5548)
                     /locus_tag="VNY79_04540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008800 - beta-lactamase activity
                     [Evidence IEA];
                     GO_process: GO:0030655 - beta-lactam antibiotic catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HWX71745.1"
                     /translation="MHRFQCLSGPALAIALGALLLSALAPNPARAGSALVVEVDTGKV
                     LHAENATYPWYPASVTKLMTLYVTLHAIKEQRITFDSLFTVSRNAVAQAPSKMGFPAG
                     TQVTADNALKMMMVKSANDMAVLLAEGVSGSIENFAELMTSTAHRLGMTSSNFVNPNG
                     LPADGQITTARDLAILARALINEFPEYDSYWHIPAIKYGRRILRNTNSLLGRYAGTDG
                     MKTGFICASGYNVVASATHDGKRLIAVVLGAPSSAARSVKAAELLERGFAQNPLSWLT
                     PALGSIEALSPVEATPPNLHDEICGPHRKKPPADDEEDQAEGSADEPNGSFSTLLSAL
                     RAPARKGAALLSDQGIAVPPVVVYTGPTRNQSELAHLEAEPVAGHHKKKGAGKTAAAK
                     PTGQSATDGKPAGRKAGAATPWTPMSSSALAGSPPPELGTKAAAAPPKKRHKAKQAAK
                     "
     gene            5755..6921
                     /locus_tag="VNY79_04545"
     CDS             5755..6921
                     /locus_tag="VNY79_04545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA acetyltransferase"
                     /protein_id="HWX71746.1"
                     /translation="MTACIVGWAHTPFGKLAGETVESLVVRVTNEALLDAGIAAKDVD
                     EIVLGHFNAGFSAQDFTASLVLQAAPDLRFKRATRVENACATGSAAVHQGLKSIAARS
                     ARIVLVVGVEQMTATPAPEIGRNLLKASYVREEADIDGGFAGLFGKIADSYFQRWGDQ
                     SDALARIAAKNHRNGVGNPYAQLRKDFGYAFCREESEKNPRVAGPLKRTDCSPVSDGA
                     AALVLSDVDTALKLGKAIVFRAAEHVQDFLPMSRRDVLKFEGCALAWKRALAQAGVAL
                     SDLSFAEVHDCFTIAELIEYEAMGLVPEGQGARAIADGTVTKDGVLPINPSGGLKAKG
                     HPIGATGVSMHALAAMQLSGRAGDMQVKNARLGGLFNMGGAAVANYVSILERLR"
     gene            complement(6970..8967)
                     /locus_tag="VNY79_04550"
     CDS             complement(6970..8967)
                     /locus_tag="VNY79_04550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HWX71747.1"
                     /translation="MDQARVRGANRRLKTEPIELGNEPPLSVDGGTGTLVDRRRVSLQ
                     WFSGTILTGLCGAALMGGAVFASLDGETNFAAAPERVETALRGAVAGAGERLSVAHKT
                     DRLPALSESSVARQTLRVPSSTRVREREVVRTRPYVRLAGNLSLTVSELSANIPPFNP
                     QKLLTDGVANADDTPAAEPDAEVSFVTCDFVPNAAKGRVAPATCDINSLLSRVKPATL
                     LPVDEVISRVRDIASAARTGSPLLASADAASGASLKLSYAAEGDIDPYVGFEARVVPE
                     NITLLPKKTAANDWSERLVVAKKSETVGSILRELGAAPDEIKALIAVLGRPARDGGLK
                     EGQKLRVLLTPAGLGHMRPLRVVIAGESAIEAAAALSDAGKYVAVDVRNVATEVAEAD
                     EEATEDDGSGVRLYQSIYETALRNNVPNPVIEEFIRVYSYDVDFQRKVHAGDSFDLLY
                     SEDESGEGRNDVRYASLTVGGETKKYYRYQTADDGAYDYYDETGKSAKKFLVRKPVAI
                     GIMRSGFGERNHPLLHYMKMHTGVDWAAPMGTPIFAAGNGAIDEIGVKGGYGKYVRVR
                     HANGYQTAYGHMTAFARGLNVGSHVRQGQVIGFVGSTGLSTGAHVHYEILVNNRFVDA
                     MRIKLPRGRVLEGLPLALFEKDRDQLDSLIARTPAHVAQAH"
     gene            9791..>10380
                     /locus_tag="VNY79_04555"
     rRNA            9791..>10380
                     /locus_tag="VNY79_04555"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT         1822 a         3368 c         3426 g         1764 t
ORIGIN      
        1 gccggcgcag gcgacgccgg ccgcgaccgg cagcgcgacc gggccatccc acgcgttgtc
       61 caagcacgct attgccgggc agggccatgc cgcgcgcgtc gcttcaagga aagcgcggcc
      121 ttgcgccgtc gtctcgagga aacgctcctt cgacgggacg aacgcggcgg caagctcggc
      181 gacggcgcgt agcgccccac tatcgtcagc tgcggctgca cggtgtgcgt gagcaaagaa
      241 gacgccatca gcaaagccgc cgccttcgcc gagcatcacc gcaagccagg ttcgcagcgt
      301 ttcggcgttg gtgatatcgc cagcctcgac cgcccattcg atgcccgtcg aataggagaa
      361 ggcgccgatc ggataggccg gcgacagcca ggccatgagc cggtagaggg ccgcggtatc
      421 catccgctca ttcccgcccg ggcgggtatc aaggggcctc ttgtcgccgg aattggcgat
      481 agcctttatc gctccccgct tgcgcggggg cgagcgcagg aggggccggt tcacgcccgc
      541 acgcccgccc ttagtcatga tcgtggccgt gatgatcgcc acggtgcgta tggccacggt
      601 gctgttcgta ggcgccgtgt tcgggatcga acggtgcctc catcggcgac aggcgggcgc
      661 cgagcccgcg cagcatgtcc tcgatcacgt ggtcgcggcg caggcgcagc cgatcgccga
      721 caatctccac gtcgacatga cggttaccga tatgccaggc gagccgcgcc agctcgtgag
      781 catcggcagc ggcgatctcg acaagcggtt ccacgcgccc ggtgacgcgc acgatcgcgc
      841 cgtcctcgag gacgaggccg tcgccgtcgc gcaacgcggt cgcctgcggc aggtcgagca
      901 ggaaagtcgt accgcgttcg ccggtcagga cgatgcggcg gcgatggcgc tcctgcgcat
      961 cgagcgtgac gcgatcgacc gcgctagcgt cgtcccactg gccggctgat ttgactgcat
     1021 tggcgcgctt catctgcggc gacattagcg cagcgccgac ccatgagata gctcgagaaa
     1081 gacaaggctc agcgtgcggt tggagcttgc cgcggaagcc tttatggtgc cgcgccgggg
     1141 aggggaattc tcaagcatga ccatcaaagg caaagcctac atcgccggcg ccttcgagca
     1201 tccgacgcgc catgcgccgg acaagacggt ggctcaactg cacgccgagg tggcgctcgg
     1261 cgcactcgcc gacgcgggcc tcacgcgcgc cgatgtcgac ggctatttct gctccggcga
     1321 cgcacccggg cccggcccgg cgtcgatggc ggagtacatg aatctcaagc tgcgccacgc
     1381 cgagtcgacc gagcttggcg gcgcctccta tatcgtgctc gcgtcgcatg cggccgaagc
     1441 gatcgcagcc ggcaaatgcg atgtcgctct ggtgactctg gccgggcggc cgcgcagcga
     1501 gggcatggcc accggcaccg cgccgcggcc gcgcgacccg aaccagcccg agggcggctg
     1561 ggaggggccc tacgccatca ccacggcgaa cgcctacgcc atgggcgcga tgcgccacat
     1621 gcacgagtac ggcaccacgg gcgagcagct cgcctgggtc aaggtcgccg cctcgcatca
     1681 cgcgcaatac aatccgcatg ccatgctgcc cgagatagtg accgtcgagg acgtggtgaa
     1741 ctcgccgatg atcgcttccc cgctgcatcg gctcgattgc tgcgtgatca gcgacggcgg
     1801 cggcgcgatc gtcatcgttc ggccggagat cgccaaaaag ctcaagcggc cgctggtcaa
     1861 gatcatcggc gccggcgagg cggtaaagca tctcgccgcc ggcaccttcg atatcacgac
     1921 gtcgggcgcg gcgcgatccg ggccgatcgc cttcgccgag gccggggtga cccccgccga
     1981 catcaaatac gcctcgatct acgacagctt caccatcacc gtcatcatcc agctcgagga
     2041 tctcggcttc tgcgccaagg gcgcgggcgg caagtttgtg gccgacggca atctcatctc
     2101 cggcacggga aagctgccgt tcaacaccga cggcggcggg ctgtgcaaca accatcccgc
     2161 caatcgcggc agcatgacca aggtaatcga ggcggtgcgg cagttgcgcg gcgaggcgca
     2221 tcctgcggtc caggtcaaga actgcgacct cgcactggcg cagggtaccg ggtttcttct
     2281 tgccacgcgg cacggcagcg gcacgctgat catggagcgg gagtgaagtg atggcccgga
     2341 agataacgcc gcccgcggtg aaccccgaga ccaagccatt ctgggacgca gcgcgcgagg
     2401 gccggttctt ggtcccgttc tgcgccgcct gcggcaaggc gcattggtat ccgcgtgcca
     2461 tctgtccgtt ttgcgcgggt gacaaggtcg agtggcgcaa ggcctcaggg aaggggacga
     2521 tctacacctt cagcgtgatg cgccgcgtca aggagcccta tgccatcgcc cacgtgaccc
     2581 tcgccgaagg accgacgatg ctgaccaaca tcgtcaattg cgatttcgac aaactgcaca
     2641 tcggccagcc ggttgccgtc gtcttccagg agaccgaagg cggcccgccg gtgccgatgt
     2701 tcaagccgac ctgacgccgg acgccgtccc gtgatccaca agatcgtaca gagcatggcc
     2761 gaggcaatgg ccggaatccg cgacggctcg gtcgtgttgc tcggcggctt cggcagcatc
     2821 ggcttgcctt acgcgctggt cgaagggctg atcgagcaag gcgccaagga tctcaccgtc
     2881 gtcgccaaca atgccggcgt cggccgggtc ggcctggcaa gactcctcga cgccgggcgg
     2941 gtgcgcaaga tcatctgctc gtacccgcgg accgccgatc cagcggcctt cctgaaggcc
     3001 tatcgcgccg gccgggtcga gctcgaagtc atgccccagg gcaccatggc ggaacgcatg
     3061 cgtgccgccg gcgccggcat tcccgccttc tatacgccga cctcggtcgg cacgaagctc
     3121 gccgagggca aggaagtgcg cgagttcgcc ggccgccagt acgtgctcga agaggcgctc
     3181 ccgggcgatg tggcgttgat cgagtgctgg gaggcggacc gctggggcaa cttgacctat
     3241 cggtcgtcag cccgcaattt caatccggtg atggcgatgg ccgcgaagct gaccatcgcg
     3301 caggcgcagc acatcgtcgc gctcggcgcg ctcgatcctg agagggtggt aacccccggc
     3361 attttcgtga cccgggtcgt gcacgtgccc tacggcgaac cgacgataac gtgaggaggc
     3421 ggtatgaacg tgaacgcgag cgcaaatgtg ctggccgcat gcaagccgtg gacgcgcacc
     3481 gagatcgcgg cccgcgcggc gcacgacatc cctgaaggct tttatgtcaa tctcggcatc
     3541 ggcataccag tgctggtcgc cgatcacttg ccggcggacc gcgaaatagt catccaatcc
     3601 gagaatggtg tgctcggcat gggcccggcg ccggagccgg acaagatcaa ccgctggctg
     3661 accaatgccg gcaagcaata tgtcaccctg ctccccggcg gctcctacat gcatcacgcc
     3721 gacagcttcg cgctcatccg cggcggtcat ctcgatctct gcgtgctcgg cgccttccag
     3781 gtcgccgaga acggcgatct cgccaactgg gcgacgtccg acagcgacca cacgccggcc
     3841 gtgggcggcg ccatggacct tgccgccggg gcccagcgca tctgggtgct gatggagcac
     3901 accaccaaga acggcgagag ccggctcaag cgccggtgca gctatccgct caccgcgccc
     3961 ggcgtggtca agcgcgtcta caccaacctc gccgtgcttg acgtgaccga cgaaggcttc
     4021 gtggtgcggg acatgctgcc cggtctcacg ctcgaggcgc tgcaggacgt gaccgaagcg
     4081 cggctgcgca tggcgaattg accggagcgc tcgtagcgag ccagcagccc catatcaacg
     4141 gtcgtcatcc cggggcgtcg gccatgacgc gggcgctggc gaagccgtgg atggtctatt
     4201 tcgcggcttg tttcgccttg tgccgctttt tcggtggagc ggcggccgct ttggtcccga
     4261 gttcaggcgg cgggctaccc gcaagcgccg aggacgacat cggggtccat ggggtcgcag
     4321 ctcccgcctt cctccctgcg ggcttgccat ccgtggcgct ctggccagtt ggcttggctg
     4381 ccgctgtctt ccctgcccct tttttcttgt ggtggccggc gacgggctcc gcctcgaggt
     4441 gcgccaattc cgactggttg cgcgtcggcc cggtgtagac caccacggga ggcacggcga
     4501 ttccttggtc ggagaggagc gcggcgcctt ttcgcgccgg ggcgcgcaag gccgacagca
     4561 gcgtcgagaa cgagccattc ggttcgtcgg cgctgccttc ggcctgatcc tcctcatcgt
     4621 ccgctggcgg cttcttgcga tgcggcccgc atatctcgtc gtgcagattg ggcggggtcg
     4681 cctccaccgg agacagcgct tcgatcgaac cgagcgccgg cgtgagccac gaaagcggat
     4741 tctgcgcgaa tccgcgctcg agaagctctg ccgccttcac cgagcgtgcc gccgatgagg
     4801 gcgcaccgag caccaccgcg atcagccgtt tgccgtcatg cgtcgccgag gcgacaacgt
     4861 tgtatccgga agcgcagatg aagccggtct tcatgccgtc agtgccggca tagcgtccga
     4921 gcaggctgtt ggtgttgcgc aggatgcgcc ggccgtactt gatcgccggt atgtgccagt
     4981 aggaatcgta ttcgggaaac tcgttgatca gcgcgcgcgc caggatggcg agatcgcgcg
     5041 ccgtggtgat ctggccgtcg gcgggcaggc cgttgggatt gacgaagttc gatgaggtca
     5101 tgccaaggcg gtgcgccgtg ctcgtcatca gttcggcgaa gttctcgatc gagccggaaa
     5161 cgccctcggc gagcagcacg gccatgtcgt tcgccgattt caccatcatc atcttcaggg
     5221 cgttgtcggc ggtgacctgg gtgcccgccg gaaagcccat cttcgacgga gcctgagcga
     5281 ccgcattgcg cgagaccgtg aacaggctgt cgaaggtgat gcgctgctcc ttgatggcgt
     5341 gcaacgtgac gtaaagcgtc atcagcttcg ttaccgaagc aggataccag ggataggtgg
     5401 cattctcggc gtgcagcacc ttgccggtgt cgacctcgac taccagtgcg gatcccgctc
     5461 gagccggatt tggcgctagc gccgagagca agagggcgcc gagcgcaatg gcaagcgctg
     5521 gccccgaaag gcattggaaa cgatgcacgt gtcgcggtcc attctgttgg tggcccccaa
     5581 gaagaataaa gggccgcgaa aggttcacga taggttctga gcgcgcgcag gtattatcta
     5641 ccctcaagac ctcctcgaac gcaaagacga ataccgctat cactaagccg ctgtggattt
     5701 gcgatacagc catagccaag taaaagcgac cgaaattcgg caagggagcg gtcaatgacg
     5761 gcttgcatcg tgggatgggc gcatacgccc ttcgggaagc tcgccggcga aacggtcgag
     5821 agccttgtgg tacgcgtgac aaacgaggcg ctgctcgacg ccggtatcgc ggcaaaggac
     5881 gtcgacgaga tcgtcctcgg gcacttcaac gccggcttct cggcgcagga ttttaccgca
     5941 tcgctcgtgc tgcaggccgc acccgatctg cgcttcaagc gcgcgacacg ggtcgagaat
     6001 gcgtgcgcga ccggctccgc cgccgtgcac cagggactga aatccatcgc cgcacgatcg
     6061 gcgcgcatcg tcctcgtggt cggcgtcgag cagatgaccg cgacgccggc ccccgagatc
     6121 ggccgcaatc tgctcaaggc gtcctacgtg cgcgaggaag ccgacatcga cggcggcttc
     6181 gccggccttt tcggcaagat cgccgacagc tatttccagc gctggggcga ccagtccgac
     6241 gcgctggccc gcatcgccgc caagaaccac aggaacggcg tcggcaaccc atacgcgcag
     6301 ctgcgcaagg atttcgggta cgccttctgc cgcgaggaaa gcgagaagaa cccgcgcgtt
     6361 gccggtccgc tcaagcgcac cgattgttcg ccggtttccg acggcgcggc cgcgctggtg
     6421 ctgagcgatg tcgataccgc gctcaagctc ggcaaggcga tcgtgttccg cgccgccgag
     6481 cacgtgcagg acttcctgcc gatgtcgcgg cgcgacgtgc tcaagttcga gggctgcgcg
     6541 ctggcgtgga agcgggcgct ggcacaagcc ggcgtcgcgc tctccgacct ttctttcgcc
     6601 gaggtccacg actgcttcac catcgccgag ctgatcgagt acgaggccat ggggttggtg
     6661 ccggaagggc agggcgctcg cgccatcgcc gacggtaccg tcaccaagga cggcgtactt
     6721 ccgatcaatc cgtccggcgg cctcaaggcc aaaggtcatc cgatcggcgc gaccggcgtc
     6781 tccatgcatg cgctcgccgc catgcagctc tccggccgcg ccggcgacat gcaggtgaag
     6841 aatgcgcggc tcggcggcct gttcaacatg ggcggcgctg cggtcgccaa ctatgtgagc
     6901 atcctggagc gtctgcgctg agtgggtgcg cggctggggc agggcaacga gcgcggcaat
     6961 cggtgtcggt cagtgcgcct gcgccacgtg cgccggcgtg cgcgcgatca gcgagtcgag
     7021 ctggtcgcga tccttctcga acagggcgag cggaaggccc tcgagaacgc ggccgcgcgg
     7081 cagcttgatg cgcatcgcat cgacgaaccg gttgttcacc aggatctcgt agtgcacgtg
     7141 ggcgccggtc gaaaggccgg tcgagccgac gaagccgatg acctggcctt ggcgcacgtg
     7201 gctgccgacg ttgaggccgc gggcaaatgc cgtcatgtgc ccgtaggccg tttgatagcc
     7261 gttggcatgc cggacgcgca catatttgcc gtagccgccc ttgaccccga tctcgtcgat
     7321 ggcgccgttg ccggcggcaa agatcggcgt gcccatcggc gccgcccagt cgacgccggt
     7381 atgcatcttc atgtagtgga ggagcggatg attgcgttcg ccgaaccctg aacgcatgat
     7441 gccgatggcg acgggcttgc ggaccaaaaa cttcttcgcg ctctttccgg tctcgtcata
     7501 atagtcgtaa gcgccgtcgt ccgccgtctg atagcgatag tacttcttcg tctcgccgcc
     7561 gacggtcagc gaagcatagc gcacgtcatt gcggccctcg ccgctctcgt cctcggaata
     7621 aaggaggtcg aaggaatccc cggcatgcac cttgcgctgg aagtcgacat cgtaggagta
     7681 gacgcggatg aattcctcga tcaccgggtt cggcacattg ttgcgcagcg cggtctcgta
     7741 aatgctctgg tagagccgca cgccgctgcc gtcgtcctcg gtcgcctctt cgtccgcttc
     7801 ggcgacctcg gtggcgacgt tgcgcacgtc gaccgcgacg tatttgccgg cgtcggacaa
     7861 cgctgccgcc gcctcgatcg cgctctcccc agcgatgacg acgcgcagcg gccgcatgtg
     7921 gccgaggccc gccggcgtca gcagcacgcg cagtttctgg ccttccttca atccgccgtc
     7981 gcgagccggc cgacccagca cggcgatgag cgccttgatt tcgtcgggcg ccgcaccgag
     8041 ttcccgcaga atcgacccga ccgtctcgct cttcttcgcc acgaccagac gttcgctcca
     8101 gtcgttggcg gctgtcttct tgggtagcag tgtgatgttc tcgggcacga ctcgcgcctc
     8161 gaacccgacg taggggtcga tatcgccctc ggcagcataa ctgagcttga ggcttgcccc
     8221 gcttgccgcg tcggcgctcg ccaggagcgg tgaacctgtc cgcgccgcgc ttgcaatatc
     8281 gcgtacgcgc gagatcactt cgtcgaccgg cagcagcgtc gccggcttca ccctcgacag
     8341 cagcgagttg atgtcgcacg ttgccggcgc caccctgcct tttgcggcgt tgggaacgaa
     8401 gtcgcaggta acgaaggaga cttcggcgtc cggttccgcc gccggcgtat cgtcggcgtt
     8461 ggccacgccg tcggtgagaa gcttttgcgg attgaagggc gggatattgg cggacagttc
     8521 cgagaccgtc agcgagagat tgccggcgag ccgcacatag ggacgcgtgc gcactacttc
     8581 gcgctcgcgc acccgcgtgc tgctcggaac ccgcagcgtc tgccgcgcaa cactcgactc
     8641 gctgagcgcg ggaaggcgat cagtcttgtg cgcgacgctc aaccgctcgc cggcgccggc
     8701 aacggcgcca cgcaacgccg tctcgacccg ttcgggcgct gcggcgaaat tggtttcacc
     8761 gtcgagagaa gcgaaaacgg cgccgcccat cagcgcagcg ccgcacaggc cggtcaggat
     8821 cgtaccgctg aaccactgca acgagacccg gcgccggtcc accagcgtgc cggtgcctcc
     8881 gtcgacagaa agcggcggct cgttgccgag ttcgatgggc tcggttttca gcctccgatt
     8941 tgcgccgcgc accctggctt ggtccaagac cccgttcccc cgcagtcgcg atcgcgtttc
     9001 gtgtgccgca tatgcggcgc cgaacctggt aagaagtccg gaacggattc ccaaagcctc
     9061 ggggtccgga ccggcttgga ttgaagcctc gaatcaaggc gatagacacc gccacgccga
     9121 tccaggccac atcaacgcga ccgggtcgcc gaggctgaaa cctttacctg atgctgccgc
     9181 tcccccgcat tgcgacatcc ccgacacgat tatgtaaaga acggcggagg aatgtggccg
     9241 cagtgcggcg cacgcactgc gaaatcgcac ctcgccggga cttgggggta ttgccggcac
     9301 taacagggca atcgccgcgt cgccgccccg ctctttcgcg tttgacggtt gacattcgcg
     9361 gcccccgaag aatatataag ccctcttggc gcgctgccgc ttgggcgacg gcgcgtctgc
     9421 gaagcccctc actgattact cggtgaacag catccggctc cgtcggatgt gtggacttcg
     9481 gcggctcttg ccttccgtcc cctcccgttc gcggcgaggg gtaagaggga ggagaagggg
     9541 accttcacgg gtccctcggc tgtttgacaa gtgaatcgga agaaagagaa acgtggacgg
     9601 cggagtccct gcggaccgtc gccaaaggcc gaagcttgct tcggttcggc ggcacggtca
     9661 ggacgagact tcggcggtct acgtttcagg tcaacaccct gatgcgcgag catcagagtg
     9721 acggacctcg tcaatggcga cgcgcgagcg tcgccgtgcg aaacgtgacc ggccgggaaa
     9781 agttctcatc caacttgaga gtttgatcct ggctcagagc gaacgctggc ggcaggccta
     9841 atacatgcaa gtcgagcggg tgtagcaata caccagcggc agacgggaga gtaacacgtg
     9901 ggaacgtgcc cttcagttcg gaacaaccca gggaaacttg ggctaatacc ggatacgtcc
     9961 gaaaggagaa agatttatcg ctgaaggatc ggcccgcgtc tgattagctt gttggtgagg
    10021 taacggctca ccaaggcgac gatcagtagc tggtctgaga ggatgatcag cctcactggg
    10081 actgagacac ggcccagact cctacgggag gcagcagtgg ggaatattgg acaatgggcg
    10141 caagcctgat ccagccatgc cgcgtggatg atgaaggcct tagggttgta aagtcctttc
    10201 gacggggaag ataatgacgg tacccgtaga agaagccccg gctaacttcg tgccagcagc
    10261 cgcggtaata cgaagggggc tagcgttgct cggaatcact gggcgtaaag cgcacgtagg
    10321 cggattgtta agtcaggggt gaaatcctgg agctcaactc cagaactgcc tttgatactg
//
LOCUS       DATMQB010000141         3565 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2830678, whole genome shotgun sequence.
ACCESSION   DATMQB010000141 DATMQB010000000
VERSION     DATMQB010000141.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3565)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3565)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3565
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2830678"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(1..76)
                     /locus_tag="VNY79_04560"
     tRNA            complement(1..76)
                     /locus_tag="VNY79_04560"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(41..43),aa:Arg,seq:tct)
     gene            207..>3565
                     /locus_tag="VNY79_04565"
     CDS             207..>3565
                     /locus_tag="VNY79_04565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MG2 domain-containing protein"
                     /protein_id="HWX71748.1"
                     /translation="MLSLVRAGLAAALVAVACLAANAADKPFQDSDLADSAVALEAKI
                     KADAGAPSKPLAQIRRDADAAFSRNDFRNGMALLGQIVAAAPNDGATWLRLARTIMQI
                     RPSSDDERKLLLERASSAAYIAYLRAPSRSEEADSLALLGNVLSQRTSWRPALDAMRL
                     SLELHEAADLRGQYERLREQYGFRVLDYSIDADTASPRACFQFSEDLPARGDFSPFVA
                     LAGADKPALSAAEKQLCVEGLKHGETYTVTLRTGLPSTVHETLSQSKDFSIYVRDRKP
                     LARFASNAYVLPRSGQRGIPIVSVNSRAIAVEILRIDDRNLVGTLGGSGEYDRGDFKH
                     SLNRYEIEQLRQSRGVSVWKGELAVESPPLNTDVTTAFPVDSALGDLKPGVYVIVAQP
                     KELKDTDNDYGSQATQWFVVSDLGLTAFSGNDGIHAYVHSLATADAKSGIELRLISRS
                     NEVLATRRTDGNGHAQFEAALASGEGGAAPALLTAADAQGDYAFLSLTGSAFDLSDRG
                     VSGRAASAGLDAFVYAERGVYRTGETVYLTALLRDVQGTAALGVPLTLVAERPDGVEY
                     RRTVVPDQGLGGHSLVLPVIGSAPTGTWHVRAFTDPKRPAVGETTFLVEDYVPDRIEF
                     DLTSPTGRVSPKAPATVDVAGRFLYGAPAAGLDLEGDATVAVAKERAGFPGYEFGLAD
                     EEVSTARQPLEDLLATDGAGKAKFNVSLDKLPASTHPLEAKITVRMAEAGGRAVERTI
                     TLPVSASGAMIGVKPQFSGRSLSDGATAALDVIVVMPDGTAAARRGLHYELQRVDTHY
                     QFYKRDGRWNYEPVKTTTRVADGTADAAADKPARISLPVTFGRYRLEVSTGDPDGPVT
                     SLAFDAGFYVEANADTPDMLEVALDQNEYRAGDTMTVAVTARSAGRLTLNVIGDRLLA
                     SNSVEVKPGAVQVKMPVGRDWGSGAYVVATLRRPLDAPAQRMPGRSIGVHWFSIDHAA
                     KTLTLDLNAPPLLRPNSTLRVPIKVGLPAGAEARVAVAAVDVGILNLTNYKPPSPDDY
                     YLGQRTLAADIRDLYGDLIDGMQGARGQIRSGGDAGAEALQGNPPTGPPVALYSGLLK
                     VGADGTVEASFEVPAFAGTVRVMAVAWSKDK"
BASE COUNT          575 a         1269 c         1176 g          545 t
ORIGIN      
        1 tggcgacccc ggcaggattc gaacctgcga ccttcagctt agaaggctgt tgctctatcc
       61 cctgagctac ggggccggtg gccggatcat atccgcatca tatagagaat cgttggtaaa
      121 atctctcggt cacgacctcg acacgatctg cgtctcaaat cggcgcctgc gggtgaaatt
      181 gcgcacccct cgggaggaga tcaccaatgc tttcgctcgt tcgcgccggc cttgccgccg
      241 cgctcgtggc tgttgcctgc ctggcggcga atgccgccga caagccgttc caggatagcg
      301 atctcgccga cagcgcggtc gcgctggaag ctaagatcaa ggcggatgcg ggcgcgccgt
      361 cgaagccgct cgcgcagatc cgccgcgacg ccgacgccgc cttctcgcgc aacgatttcc
      421 gcaacggcat ggcgcttctc gggcagatcg tcgcagcggc gccgaacgac ggcgccacgt
      481 ggctgcggct cgcgcgcacc atcatgcaaa tccggccgtc gagcgacgac gagcgcaagc
      541 tcctgctcga gcgcgcctcg agcgccgcct acatcgccta tctgcgggcc ccaagccggt
      601 ccgaggaagc ggacagcctc gcgctgctcg gcaatgtctt gagccagcgc acctcgtggc
      661 ggccggcgct cgacgcgatg cggctctcgc tcgagctgca cgaggccgcc gatctgcgcg
      721 gccaatacga gcggctgcgc gagcagtacg ggttccgcgt gctcgactac agcatcgacg
      781 cggacaccgc ctcgccgcgc gcctgcttcc agttttctga agatctgccc gcgcgcggcg
      841 acttctcacc cttcgtcgcg ctcgccggcg ccgacaagcc ggcgctgtcc gccgccgaga
      901 agcagctttg cgtcgaaggt ttaaagcacg gcgagaccta tacggtcacc ttgcgcaccg
      961 gcctgccgtc gaccgtgcat gagacgctgt cgcagtcgaa ggatttttcc atctacgtgc
     1021 gcgaccgcaa gccgctcgca cgctttgcca gcaatgccta cgtgctgccg cgctcgggcc
     1081 aacgcgggat ccccattgtc agcgtcaaca gccgcgcgat tgccgtggag atcctgcgta
     1141 tcgacgatcg caacctcgtc ggcactctcg gcggcagcgg cgagtacgat cgcggcgatt
     1201 tcaagcacag cctcaaccgc tacgagatcg agcagctgcg ccagtcgcgc ggcgtttccg
     1261 tctggaaggg cgagcttgcg gtcgaatcgc caccgctcaa caccgacgtc accaccgcct
     1321 tcccggtcga cagtgcgctc ggcgacctca agcccggcgt ctacgtcatc gtggcgcagc
     1381 cgaaggagct caaggacacc gacaacgact acggctcgca ggcgacgcaa tggttcgtcg
     1441 tttccgacct cggcctcacc gcgttcagcg gcaatgacgg gattcacgcc tacgtccatt
     1501 cgctggcgac agcggatgcc aagagcggga tcgagctgcg gctcatttcg cgcagcaacg
     1561 aggtgttggc cacacgccgc accgacggca acgggcacgc gcaattcgaa gcggcgcttg
     1621 cgagcgggga gggcggcgcc gccccggcgc tgctgaccgc cgccgatgcg cagggcgact
     1681 atgccttcct tagcctcacc gggtcggcct tcgatctcag cgatcgcggc gtcagcggcc
     1741 gcgccgcctc ggccggcctc gacgccttcg tctatgccga acggggcgtc tatcgcaccg
     1801 gggagaccgt ctatctcacc gcgctcttgc gggacgtgca gggcaccgcc gcgctcggcg
     1861 tgccgctgac gctcgtcgcc gagcggccgg acggcgtcga ataccggcgc acggtggtgc
     1921 cggaccaggg cctgggcggt cacagcctgg ttttgccggt cataggttcc gcgccgaccg
     1981 gcacttggca cgtgcgcgcc ttcaccgacc cgaagcggcc ggcggtcggc gagaccacgt
     2041 ttctcgtcga ggactacgtg cccgaccgga tcgagttcga tctcacctcg ccgaccggcc
     2101 gcgtctcgcc gaaggcgcct gccaccgtgg acgtcgcggg tcgcttcctt tacggcgcgc
     2161 cggcagcggg cctcgacctc gaaggcgacg cgaccgtcgc ggtggccaag gagcgcgccg
     2221 gcttccccgg ctacgagttc ggcctcgccg acgaggaggt ttcgaccgcc aggcaaccgc
     2281 tcgaggactt gctggcgacc gacggcgccg gcaaggcgaa attcaatgtc agtctcgaca
     2341 agctgccggc aagtacgcat ccgctcgaag cgaagatcac ggtgcgcatg gccgaggccg
     2401 gcggccgcgc ggtcgagcgc accatcaccc tgccggtgag cgcgagcggc gcgatgatcg
     2461 gcgtcaagcc gcagttttcc ggacgctcgc tcagcgacgg cgccaccgcc gcgctcgatg
     2521 tcattgtcgt catgcccgat ggcaccgcgg ccgcgcggcg cggcctgcac tacgagctgc
     2581 agcgcgtcga cacccactat cagttctaca agcgcgacgg ccgctggaac tacgagccgg
     2641 tgaagacaac gacgcgagtc gccgacggaa cggccgatgc cgccgccgac aagccggcgc
     2701 gcatttcgct gccggtgacg ttcggccgct atcgccttga agtatcgacc ggcgatcccg
     2761 acggcccggt gacctcgctc gctttcgatg caggcttcta tgtcgaggcg aacgccgata
     2821 cgccggacat gctggaggtg gcgctcgatc agaacgagta ccgggccggc gacacgatga
     2881 ccgtcgcggt caccgcgcgc agcgccggac ggcttacgct caacgtcatc ggcgaccggc
     2941 tgctggcgag caacagcgtc gaggtcaagc ccggcgccgt gcaggtgaag atgccggtcg
     3001 gccgcgactg gggcagcggc gcctatgtgg tggcaacgct gcgccggccg ctcgacgcgc
     3061 cggcacaacg catgcccggc cgctccatcg gggtgcactg gttctcgatc gaccacgcgg
     3121 caaagacgct caccctcgat ctcaacgcgc cgccgctgct gcggccgaac tcgaccctgc
     3181 gcgtgccgat aaaagtgggc cttccggcag gggcggaggc gcgagtggcg gtcgcggccg
     3241 tcgatgtcgg cattctcaat ctcaccaact acaagccgcc gtcgccggac gactactacc
     3301 tcgggcagcg cacgcttgcc gccgacatcc gcgatctcta cggcgacctg atcgacggca
     3361 tgcagggcgc ccgcggccag atccgcagcg gcggcgacgc cggcgcggag gcactgcaag
     3421 gcaacccgcc gaccggcccg ccggtggcgc tctattccgg cctcctgaag gtcggcgccg
     3481 acggcaccgt ggaggcgagc tttgaggtgc ccgccttcgc cggcaccgtg cgcgtgatgg
     3541 cggtggcgtg gagcaaggac aagat
//
LOCUS       DATMQB010000142         3196 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_45180, whole genome shotgun sequence.
ACCESSION   DATMQB010000142 DATMQB010000000
VERSION     DATMQB010000142.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3196)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3196)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3196
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_45180"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(299..595)
                     /locus_tag="VNY79_04570"
     CDS             complement(299..595)
                     /locus_tag="VNY79_04570"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71749.1"
                     /translation="MRRKPGFFRERGASAARHWHGFPASSGLAPLLAAELFGALARVA
                     HESETAILMVEQNARRALKMANRAYLLSLGRIVGEGSAQSLAQDKAVAESYLGL"
     gene            complement(592..1752)
                     /locus_tag="VNY79_04575"
     CDS             complement(592..1752)
                     /locus_tag="VNY79_04575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018701092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX71750.1"
                     /translation="MRLWGGLDRLARGADLRGATPSAPGEGQRRNSRFTVVTATPTSA
                     VTALLAIPGIVLLFALPAFASRALLQELFYVFTMLALAQLWNLLAGCAGLVSVGQQAF
                     VGVGAYALFAFTVMEGFDAVPSIALAGIVAGVVAVPAALIVFRLRGAYFAIGTWVVAE
                     VCRLVLAQVKQLGGGTGTSLPTDVAGAMLGLEEVRELFAVRGPAARDILAYWLALLLA
                     AGTFMLVYRLLRSRYGLALSAIGDAEAAAESAGVDVFRTKLLIYVVTAMATGMAGALI
                     FLQKARISPDAAFSLIDWTAYVIFIVVIGGIGSMEGPIIGVLIFYLLQYYLAALGSWY
                     LIILGGLAILLMLFAPSGVWGVISHTFDISLFPVRRRLIVPGDKAKQKEGEA"
     gene            complement(1763..2629)
                     /locus_tag="VNY79_04580"
     CDS             complement(1763..2629)
                     /locus_tag="VNY79_04580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003554581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX71751.1"
                     /translation="MLGWVDTLLQGILLGGLYSLYATGLSVIFGIMRLVNLAHGDLIV
                     LAAFLMLALTAVGVPIVLAVAVVVPLMFAAGYALQWALLNRALGRNILPPLLITFGLS
                     IIVQNGLLETFSADTRRLDVGHLQSASLPLGGGIAVGLMPLICLAAAVAVIVLLNGVF
                     YRTALGRAFRATADDVEIAQLMGINNKSIYALTMGIALAVCAVAGLFLGARANFDPSI
                     GPARLLYAFEAVIIGGLGSLWGTLAGGIVVGLAQTIGAHIDPEWQILSGHVAFLVVLV
                     IRPRGLFPRAVD"
     gene            complement(2633..>3196)
                     /locus_tag="VNY79_04585"
     CDS             complement(2633..>3196)
                     /locus_tag="VNY79_04585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX71752.1"
                     /translation="KAIAGLLPRPAAAVRLNGRDIGALPAFEIVKLGVALVPEGRRLF
                     PSLSVEENLLVGAYGRRTDGPWSLATIYKLFPMLRERRHAPSTALSGGQQQMVAVGRS
                     LMSNPRILLCDELSLGLAPIVIRDIYAALTDIKAQGTSVVLVEQDLVHAMSVADRAYC
                     FQEGRVTLTGRPQDLTRDAIHAAYFGL"
BASE COUNT          609 a         1061 c         1098 g          428 t
ORIGIN      
        1 agccctcggc ggacggagcc tgggcggacg ccaagccggt ggacgcgaac aggaccgcca
       61 ccaccgtagc ggggataatc ttgcgagaca ttgtgacctc caagtctgct ttgcttgcgg
      121 cacgcatata ggcgcgatcg gtgccgtcac cccgccaaat gctgcaatgc acctatgctg
      181 caagacacga taaaatctga caattcgtcg caattctgac aagtggatat tgcgttgcac
      241 gcatccggcg cgcgctgcgc ccttgccgca cggctgcggg tttgatggcg gcttcttctc
      301 agaggccgag ataggattcg gccaccgcct tgtcctgtgc gagcgactgc gcgctgcctt
      361 cgccgacgat gcggccgagc gacagcagat aggcacggtt cgccattttc agcgcccgcc
      421 gcgcgttctg ttcgaccatg aggatcgcgg tctcgctttc gtgcgcgaca cgtgcgagcg
      481 cgccgaacag ttccgcggcg agcagcggcg ccaagccgct gctcgccgga aatccgtgcc
      541 agtgccgggc cgcgctcgcg ccccgctccc ggaaaaatcc cggtttcctt ctcatgcctc
      601 gccttccttc tgcttcgcct tgtctcccgg cacgatcaat ctgcgccgca ccgggaacag
      661 gctgatgtcg aaggtgtgcg agatcacgcc ccagacgccg gacggagcaa acagcatgag
      721 cagaatggcg aggccgccga ggatgatcag ataccaggag ccgagcgcgg cgagataata
      781 ttgcagcaga taaaaaatca gcacgccgat gatcgggcct tccatcgagc cgatgccgcc
      841 gatgaccacg atgaagatga cataggccgt ccaatcgatg agcgagaaag ccgcgtcggg
      901 cgagatcctg gccttctgca ggaagatgag cgcgccggcc atgccggtcg ccatggcggt
      961 caccacgtag atcaggagct tggtgcggaa gacgtcgacg ccggcgcttt cggccgcggc
     1021 ctcggcgtcg ccgatggcgg aaagcgcgag cccgtagcgc gagcgcagca gcctgtagac
     1081 cagcatgaag gtgccggcgg cgagcaggag ggccagccaa taggcgagaa tgtcgcgcgc
     1141 cgccggcccg cgcactgcga acagctcgcg cacctcctcg agaccgagca tcgcgcccgc
     1201 aacatcggtc ggcagcgagg tcccggtgcc gccgcccagt tgcttgacct gggccaggac
     1261 gagccggcac acctcggcga cgacccaggt gccgatggcg aaatacgcgc cgcgcaggcg
     1321 gaacacgatc agcgccgccg gcacggcgac cacgccggcg acgatgccgg cgagcgcgat
     1381 cgacggcacg gcgtcgaagc cctccatcac cgtgaaggcg aacagcgcgt aggcgccgac
     1441 gccgacgaac gcctgctggc cgacggacac gaggccggcg cagccggcga gcagattcca
     1501 cagctgcgcc agggccagca tggtgaagac gtagaacagc tcctgcagca gcgcgcggct
     1561 ggcgaaggcc ggcaaggcga acaggaggac gatcccggga atggcgagga gcgccgtgac
     1621 cgcggacgtg ggcgtcgccg tgacgacggt gaaccgtgaa ttgcgccgct gcccttcgcc
     1681 gggagcagag ggggtcgcgc cacgcaggtc ggcgccgcga gcgagccggt ccaatccgcc
     1741 ccataggcgc atgactgcga cctcaatcca ccgcgcgcgg gaacaggccg cgcggccgta
     1801 tcaccagcac caccaggaag gccacatggc cggacagaat ctgccattcc ggatcgatgt
     1861 gcgcgccgat cgtctgtgcc aggccgacga cgatgccgcc cgcgagcgtg ccccacaggc
     1921 tgccgagacc gccgatgatc actgcctcga aggcgtagag gagccgcgcc ggaccgatgc
     1981 tgggatcgaa gttggcgcgc gcgccgagaa acaacccggc gaccgcgcag accgcgagcg
     2041 cgatgcccat ggtgagcgca tagatcgatt tgttgttgat gcccatgagc tgcgcgattt
     2101 cgacatcgtc ggcggtggcg cggaaggcgc ggccgagcgc ggtgcggtag aacacgccgt
     2161 tgagcagcac gatgaccgcg accgcggcgg cgaggcagat gagcggcatc agcccgaccg
     2221 cgatgccgcc gccgagcggc agcgacgcgc tttgcaggtg gccgacgtcg agacgcctgg
     2281 tgtcggcgga gaacgtttcc aacaggccgt tctgcacgat gatcgacagc ccgaacgtga
     2341 tcagcagcgg cggcaggatg ttgcggccga gcgcgcgatt gagcagcgcc cactgcagcg
     2401 cgtagccggc ggcgaacatc agcggcacga cgacggcgac ggcgaggacg atgggcacgc
     2461 cgaccgccgt cagcgccagc atcaggaacg ccgcgagcac gatcaggtcg ccatgggcga
     2521 gattgaccag gcgcatgatg ccgaagatca ccgagagccc ggtggcatag agcgaataga
     2581 gcccgccgag caggattcct tgcagcagcg tgtcgaccca gccgagcatc cgtcacagtc
     2641 cgaaataggc ggcgtggatc gcgtcgcggg tcagatcctg cggccggccg gtcagcgtca
     2701 cccgtccttc ctggaaacaa taggcccgat cggcaaccga catcgcatgg acgagatcct
     2761 gctcgaccag gactacgctg gtgccctgcg ccttgatatc cgtcagcgcg gcatagatgt
     2821 cgcgaatgac gatgggcgcg agcccgaggc tgagctcgtc gcagaggagg atacgcgggt
     2881 tcgacatcag gctgcggccg acggcgacca tctgctgctg cccgccggac aatgccgtcg
     2941 acggcgcgtg gcgccgctcc cgcagcatgg gaaacagctt gtagatcgtg gcgaggctcc
     3001 atggcccgtc ggtgcgccgg ccgtaggcgc cgaccaggag gttctcctcg acggacagcg
     3061 agggaaagag ccgccggcct tccggcacca gggcgacgcc gagcttgacg atctcgaacg
     3121 ccggcagcgc gccgatgtcg cgcccgttga gccgcaccgc cgcggccggc cgcggcaaca
     3181 ggccggcgat cgcctt
//
LOCUS       DATMQB010000143         2516 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2521530, whole genome shotgun sequence.
ACCESSION   DATMQB010000143 DATMQB010000000
VERSION     DATMQB010000143.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2516)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2516)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2516
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2521530"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(199..1683)
                     /gene="radA"
                     /locus_tag="VNY79_04590"
     CDS             complement(199..1683)
                     /gene="radA"
                     /locus_tag="VNY79_04590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HWX71753.1"
                     /translation="MAARAQNFVCQSCGAASPRWAGRCEACGAWNTLVEEGAAAPARS
                     RHKGRLFVIEPLKGQTHEAPRSGSGMAEFDRVTGGGLVRGSVLLLGGDPGIGKSTLLL
                     EVAAAFARGNRRAVYISGEEAVAQVRLRAERLGLTDATVELAAETSVEDIIATLSQGT
                     TPHLLVIDSIQTMWTQAVEAAPGTVTQVRASAGELIRFAKRSGAAVILVGHVTKDGQI
                     AGPRVVEHMVDAVLSFEGEGSQQFRILRAIKNRFGPTDEIGVFEMTGAGLREIANPSE
                     LFLSERELGSPGTAVFAGIEGTRPLLVEIQALVAPTTLGTPRRAVVGWDPSRLSMVLA
                     VLEAHCGVRLSGHDVYLNVAGGMRIQEPAADVAAAAALVSSLAHAPLAADAVYFGEVS
                     LSGAVRPVAQTAARLKEAQKLGFMRAIVPEAARTEAPDGFSLSTLGTLANLVVDIARD
                     GTPPLRRVGRQDAWRGSAILPSNSTAPVVSSTMANRNGRSTRNI"
     gene            complement(1693..>2516)
                     /locus_tag="VNY79_04595"
     CDS             complement(1693..>2516)
                     /locus_tag="VNY79_04595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009800112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alanine racemase C-terminal domain-containing
                     protein"
                     /protein_id="HWX71754.1"
                     /translation="ARPVINSMTELAEWDAFVAAQGWLGGAALHVDTGMNRLGISAAE
                     AAALAPRVQMENHGITLLMSHLACAEIAEHPLNNVQSRLFREIRALYPGVPASLANSS
                     GIFLGDWTHCDLVRPGAALYGINPTPGQPNPMRGVVELTGRILQVREVGPGDTVGYGA
                     MWTAKRPTRLAVAALGYADGLMRSGSGTDRGGGAAVVAGKRCPFAGRISMDLVCIDIT
                     ETPQGEVRRGDTATFIGAGATIDNVATAAGTIGYEILTRLGRRCHLVHRVTEPAR"
BASE COUNT          418 a          845 c          869 g          384 t
ORIGIN      
        1 gagcatgggc atgcaccgcg cattcgattt caagacggcc gacttttccg gaatgaccgg
       61 aaaagcccag gcggagctgc ctctggccat cggtcaaatc atgcacgcgg ccgtcatcga
      121 cgtgggagag gaagggaccg aggcagcagc cgctacggct gccaccatgg tcgccaaagg
      181 gatacggtcg ccgccggctc agatattccg cgtcgaccgg ccgttcctat tcgccatcgt
      241 cgacgaaacg accggtgccg tgctgttcga ggggagaatc gccgatcctc gccaggcatc
      301 ctgacggccg acgcggcgca gtggcggcgt tccatcgcgg gcaatgtcga cgaccaggtt
      361 tgccagcgtc cccagcgtgg agagcgaaaa accatcgggg gcctcggtgc gcgccgcctc
      421 gggaacgatt gctctcatga agccgagctt ctgcgcctcc ttgagccgtg ccgcggtctg
      481 cgctaccggc cgcacggcgc ctgacagcga gacttcgccg aaatagaccg cgtccgcggc
      541 aagaggcgca tgcgcgagcg aagacaccag cgcggcggcc gcggcgacgt cggccgccgg
      601 ctcctggatg cgcattccgc cagcgacgtt gaggtagacg tcgtggccgg agagccggac
      661 gccgcaatgc gcctcgagta ctgcgagcac catggacagc cgactggggt cccagccgac
      721 gaccgcgcgg cgcggggtgc cgagcgtcgt cggcgcgacc agggcttgaa tttccacgag
      781 cagcggccgg gtcccctcga tgccggcgaa gaccgccgtg ccggggctgc cgagctcgcg
      841 ttcggaaaga aacagctccg aagggttcgc gatctcgcgc aagcccgctc cggtcatctc
      901 gaacacgccg atctcgtcgg tcgggccgaa gcggttcttg atggctcgca ggatacggaa
      961 ttgctgcgac ccttcgcctt cgaacgacag caccgcatcg accatgtgct cgaccacgcg
     1021 cggtccggcg atctggccgt ccttggtgac gtggccgacc aggatcacgg ccgcgcccga
     1081 gcgtttggcg aagcggatga gttcgccggc ggacgcccgt acttgcgtga ccgtcccggg
     1141 cgcagcttcg actgcctgcg tccacatggt ttggatcgaa tcgatgacga gaaggtgcgg
     1201 agtggtccct tgcgagagcg tcgcgataat gtcttcgacc gaggtctcgg cggcaagctc
     1261 gaccgtggcg tcggtgaggc cgagccgttc cgcgcgcagc cgcacctgcg caacggcttc
     1321 ttcgccggaa atatacaccg cgcggcgatt tccgcgcgcg aacgcggccg cgacctcgag
     1381 cagcaaagtc gacttgccga tgcccggatc gccgccgagc agcagcaccg agccccgtac
     1441 cagcccgcca ccggtaacgc ggtcgaactc cgccatgccc gagcccgacc gcggtgcttc
     1501 gtgcgtttgc cccttgagcg gctcgatgac aaacaggcgg cccttgtgcc gagaacgcgc
     1561 cggcgctgct gcgccttcct cgaccagcgt gttccaggcg ccgcaggctt cgcagcggcc
     1621 ggcccagcgc ggtgatgcgg cgccgcaact ctggcagacg aagttctgcg cgcgcgcagc
     1681 catgccactc gcctatctag ccggttcagt cacccgatgg acgagatggc agcgacggcc
     1741 aagccgggta agaatctcat aaccgatggt cccggcggcg gtggcgacat tgtcgatcgt
     1801 cgcgccggcg ccgatgaacg tcgccgtgtc gcctcggcgg acctcgcctt gcggcgtttc
     1861 ggtgatgtcg atgcagacca ggtccatgga aatgcggcca gcgaacgggc agcgcttgcc
     1921 ggcgacgacg gcggcgccgc cgccgcggtc ggttccactc ccggagcgca tgagcccgtc
     1981 ggcgtagccg agcgctgcca cggcgaggcg cgtggggcgt tttgcggtcc acatggcgcc
     2041 gtagccgacg gtgtcgccgg gtccgacttc gcggacctgc aggatgcgcc cggtcaactc
     2101 gacgacaccg cgcatcgggt tcggctgtcc gggtgtgggg ttgatgccgt aaagggcggc
     2161 gccgggccgc acgaggtcgc aatgcgtcca gtcaccaagg aaaataccgg aggaattggc
     2221 gagcgaggcg ggaacgccgg gatagagcgc acggatttcg cgaaacagcc gactctggac
     2281 attgttcagc ggatgctcgg cgatctcggc gcaggcgaga tggctcatca gcagggtgat
     2341 gccgtgattc tccatctgca cgcgcggggc aagcgccgcc gcttccgccg ccgaaatgcc
     2401 gagccggttc atgccggtgt cgacgtggag cgccgcgcct ccgagccagc cctgcgcggc
     2461 gacgaacgcg tcccactcgg caagctcagt catgctgttg atgaccgggc gggcgc
//
LOCUS       DATMQB010000144         2321 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3458949, whole genome shotgun sequence.
ACCESSION   DATMQB010000144 DATMQB010000000
VERSION     DATMQB010000144.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2321)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2321)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2321
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3458949"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..257
                     /locus_tag="VNY79_04600"
     CDS             <1..257
                     /locus_tag="VNY79_04600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HWX71755.1"
                     /translation="LYEHPAVIDAAVVAIPHQSLGEEPGAVVTLKHGTQASEEELRAF
                     AAERIAAFKVPVRILLSREMLPRNPNGKILKSELKRLFVA"
     gene            352..1137
                     /locus_tag="VNY79_04605"
     CDS             352..1137
                     /locus_tag="VNY79_04605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-binding protein"
                     /protein_id="HWX71756.1"
                     /translation="MAEAAENENEVVTAGVLVIGDEILSGRTKDKNIGYIAEYLTVIG
                     IDLKEVRIVPDEEPEIVAALNALRGRYDYVFTTGGIGPTHDDITADAVAKAFGVSIDY
                     DPRAVEILRVRMAQVGGVMNEARMRMARLPAGADLVLNKVSAAPGFWIGNVIVMAGVP
                     QIMQVMLDYVTPKLRTGAKMLSQSVRADCREGDIGTELGEIAAGHPGVVIGSYPFMDE
                     QRGANTHVVVRARDAQKLNAAVAAVEAMLTRVKTALAAAPTGR"
     gene            1171..2019
                     /locus_tag="VNY79_04610"
     CDS             1171..2019
                     /locus_tag="VNY79_04610"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HWX71757.1"
                     /translation="MIDPTRTTNNNPGMNRRDLFVTFLPRALAALAVVAGLSFAALAQ
                     SANLNAVGVVYLHGKGAWPGAADGGILSTLAEEGALVATPEMPWSFKRKYGATYEQAM
                     AEVDAAAAGLKAKGATRIVVMGHSLGANAAIGYAARHPDLAAVVALAPAHLPEAQGLR
                     SHTQEAIAEAKQLVAAGQGDVPHRFPDMAQGIPLTATATPLVYLSMFDPDGPAVIPKN
                     AEAMGPVPLLWVVGTLDPIARRGPDYAFKFGAKNPKSRYIEVFAGHLTTPLAARSQVV
                     EWINSL"
     gene            2077..>2321
                     /locus_tag="VNY79_04615"
     CDS             2077..>2321
                     /locus_tag="VNY79_04615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019170437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009116 - nucleoside metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyltransferase family protein"
                     /protein_id="HWX71758.1"
                     /translation="MPPNDVPRPHPEKIFPVSWDQFHRDSRALAWRLAGGRAFEAIVC
                     ITRGGLVPAAIVARELGIRLIETVCVSSYDHTTQGNL"
BASE COUNT          391 a          804 c          766 g          360 t
ORIGIN      
        1 cgctctacga gcatcccgcc gtgatcgacg ccgccgtcgt cgccatcccg caccaatcgc
       61 tgggcgaaga gccgggcgcg gtcgttaccc tcaagcacgg cacgcaggcg agcgaggagg
      121 agctgcgcgc ctttgccgcc gaacgcatcg cggctttcaa ggtaccggtc agaattctcc
      181 tctcccgcga gatgctgccg cgcaatccga acggcaaaat cctgaagtcc gagctcaagc
      241 gtctgtttgt tgcatgaggc gtggcgcatg cttcttgccg cctccgcatc ttaagcccta
      301 aaagctctcg tgctaaggaa ggaaggcgct ggaaagcgcg gaggattggc gatggccgaa
      361 gcggccgaga acgaaaacga ggtcgtcacg gccggggttc ttgtcatcgg cgacgagatc
      421 ctgtccggcc gcaccaagga caagaacatc ggctacatcg ccgaatacct gaccgtgatc
      481 ggcatcgatc tcaaggaggt gcgcatcgtc cccgacgagg agccggagat cgtcgccgcg
      541 ctcaacgcgc tgcgcggccg ctacgactac gtgttcacca ccggcggcat cggccccacc
      601 cacgacgaca tcaccgccga cgccgtcgcc aaggcgttcg gcgtgtcgat cgactacgat
      661 ccgcgcgccg tcgagattct ccgcgtgcgc atggcccagg tcggcggcgt gatgaacgag
      721 gcgcgcatgc gcatggcgcg gcttccggcc ggcgccgatc tggtgctcaa caaggtttcg
      781 gcggcgcccg gattctggat cggcaacgtc atcgtcatgg cgggtgtccc gcagatcatg
      841 caggtcatgc tcgactacgt gacccccaag ctcaggaccg gggcgaagat gctgtcgcag
      901 agcgtgcgcg ccgattgccg cgagggcgac atcggcaccg aactcggcga gatcgccgcc
      961 ggccaccccg gcgtcgtcat cggctcctac ccattcatgg acgagcagcg cggcgccaac
     1021 acccatgtcg tggtgcgcgc gcgcgatgcc cagaagctta acgccgcagt ggcggcggtc
     1081 gaagcgatgc tgacgcgggt gaagaccgcg ctcgcggccg cgcccaccgg acgttgacgg
     1141 ccccctaccg ccccggcgca atgtttgctc atgattgatc cgacccgcac caccaacaat
     1201 aatcccggca tgaaccggcg cgatcttttt gtgacgttcc tgccgcgggc gctcgccgcg
     1261 ctggcggtcg tcgcggggct ctcctttgcc gccctggcgc agagcgcgaa cctgaacgcc
     1321 gtcggcgtcg tctacctgca cggcaagggt gcctggcccg gcgcggccga cggcggcatt
     1381 ctttccacgc ttgcggagga gggggcgctg gtggcgacgc cggaaatgcc gtggtcgttc
     1441 aagcgcaaat acggcgccac ctatgagcag gcgatggcgg aagtcgatgc cgccgccgca
     1501 gggctcaagg ccaagggcgc aacgcggatc gtggtgatgg gccactcgct cggcgccaat
     1561 gccgcgatcg gctatgccgc ccgccacccc gatctcgccg ccgtggtcgc gctggcgccc
     1621 gcccatctgc ccgaggccca ggggctgcgc agccacaccc aagaggccat tgccgaggcc
     1681 aagcagctcg tcgccgccgg gcagggcgac gtgccgcatc gctttcccga catggcgcaa
     1741 ggcatcccgc tgacggcgac ggcgacgccg ctcgtctacc tgagcatgtt cgatccggac
     1801 ggcccggcgg tgatcccgaa gaacgccgag gcgatggggc cggtgccgct gctgtgggtc
     1861 gtcggcacgc ttgatccgat cgcccgccgc gggcccgact acgccttcaa attcggcgcc
     1921 aagaatccga agagccgcta catcgaggtc ttcgccggcc atttgacgac cccgctcgcc
     1981 gcccgctcgc aggtggtcga gtggatcaat tcgctctaac ctagcggccg cagggagtta
     2041 agggggatga ccgacgcgat ggccaagctg gagccgatgc cgccgaacga cgtgccaaga
     2101 ccccatccgg agaagatttt tccggtctcg tgggaccagt tccaccgcga ttcgcgcgcg
     2161 ctcgcctggc ggctcgccgg cggccgcgcc ttcgaggcga tcgtctgcat cacccgcggc
     2221 ggcctcgttc cggcggcgat cgtggcgcgc gaactcggca tcaggctgat cgagacggtg
     2281 tgcgtgtcga gctacgacca caccacgcag ggcaatctga t
//
LOCUS       DATMQB010000145         9910 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2834129, whole genome shotgun sequence.
ACCESSION   DATMQB010000145 DATMQB010000000
VERSION     DATMQB010000145.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9910)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9910)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9910
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2834129"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..254
                     /locus_tag="VNY79_04620"
     CDS             <1..254
                     /locus_tag="VNY79_04620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="MucR family transcriptional regulator"
                     /protein_id="HWX71759.1"
                     /translation="KPAVPLKRSITSDYLVCLEDGKKFKSLKRHLRTQYGMTPEQYRE
                     KWGLPPDYPMVAPNYAAARSQLAKQMGLGQQRRRRRERG"
     gene            complement(318..2528)
                     /locus_tag="VNY79_04625"
     CDS             complement(318..2528)
                     /locus_tag="VNY79_04625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015116 - sulfate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0008272 - sulfate transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HWX71760.1"
                     /translation="MAVGLAGADSAFGSPKLRAALTDVFAGAVGSVLSIAYSLSYAAL
                     IFAGPLENALAYGVAVTFLSAAVGAAIVAWRSSLPFAIAGPDSSISVVLAALVATLAN
                     YLLAHGGTRLLGPALIALSLTTAVTGAVLWVLGFARAGRAIRFVPYPVIGGFLGATGW
                     LMVTGAVQVITNQKVTLDNLGAFISGPVAAKIAAGVAVALVLHVATQYKQNAYVLPVV
                     LVAATAITHLALLSAGSSLAQAQVAGWLFQPQPAGHLTLPWKLEELRDFPWAAVPSLA
                     GDAIAVIFVTGITLLLNTTGIEIATRTEANIDRDLRALGFANIVTAALGGIVSCTSIS
                     RSVLVRLAGATTRICGLTVAAICAVLLLIGPGILGGVPKYVLGGVLFFLGSGLLYQWL
                     IRSSRQLALPEYLSLISITFLIVYWGFIAGVLIGIVIGCATFALSVGRVNAIKFSFDG
                     SEFRSSLDRGPDELSLLTAYGREIQGMALQSYLFFGSTNRLYQHVKDLIKNYPECRFL
                     IFDFRHVTGIDSSATHSFAQMKQAAAESGARIVLVNLAPDLERAFRTARFVADDVVVA
                     SDLDRALESCEREIINAHQAKAGDARSLSAWLTEALDSSELADSLAGYCRRLEVQAGE
                     VVARQGDAAASMHFILEGRLGIIVDLGDGRSVRVRSLGPHTTIGEMGLIARRPRSATI
                     QAEVPSVLYELDVSAYETIKRECPSLSQALLGYVIAVMTERLSFANRLIGVLQR"
     gene            complement(2685..3119)
                     /locus_tag="VNY79_04630"
     CDS             complement(2685..3119)
                     /locus_tag="VNY79_04630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SufE family protein"
                     /protein_id="HWX71761.1"
                     /translation="MADIGDIIDNFSVLDDWDDRYRYLIELGRELPPLAEAAHNDANK
                     VQGCASQVWLDTGVRPNGAGGPVLTFAGDSDAHIVRGLIAILFAIYSGKAAKDILASD
                     ALALFERLGLREHLTPQRSNGFRSMVERIRSDARAALATATV"
     gene            complement(3231..3665)
                     /locus_tag="VNY79_04635"
     CDS             complement(3231..3665)
                     /locus_tag="VNY79_04635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5330 domain-containing protein"
                     /protein_id="HWX71762.1"
                     /translation="MFFLLRMAFWLGVVLILLPSSFTQRGLSTNDVGTGDAISAASAA
                     VEDLRGFCTRQPDACTVGSHLATAIGYKAQAGAKMLYDVLSEALAPHDTGSLTRGAGN
                     GGDAKTAQTKSPQRASQNTLTPADLAPVWRGPQPRKDGKHAA"
     gene            4125..6020
                     /locus_tag="VNY79_04640"
     CDS             4125..6020
                     /locus_tag="VNY79_04640"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing sensor histidine kinase"
                     /protein_id="HWX71763.1"
                     /translation="MALFAAVREYIETLVHPSARQDALATARHRAFIAPRLLGSVIAL
                     ASFPIYLLARGAPSATELMVFAWLVAPILTAYFLSRTGRYESAHVLSSLALTGLVTVV
                     AASTGGISSFAAIWLVVVPLEAALSASRRVVATASTLALGAAGLLVILGLLGVLPDTG
                     VSGYGPLAALGIVSAALYAAGLALGAEALARTSFWLLYAEEDRYRLLARNMTDVITRH
                     GRDGSVLFASPAAESLFGCPIVELHEHGLFERVNVADRPAYLTALGDAAALGEDRSVE
                     FRVRRENFDANGHAATQFVWIEMRCRPLERATAEAGNDANLEVVAVLRDVTERKRQEQ
                     ALEDSRMEAERANAAKGRFLATMSHELRTPLNAIIGFSEMLMKESVLALDAGRRKEYA
                     GLINGSGHHLLAVINGILDMSKIETDNFEITPEPFPPAQAIAGCCDLLALRAREAGVE
                     LEKVVSDDLPDVIADRRALGQILLNLLSNAIRFTDRGGKVTISARAEAASIIFVVDDS
                     GVGISSEDLPRVGEPYFQARASYDRRHGGTGLGLSIVKGLLRLHGGELAIRSRLGEGT
                     RVTVRMPLDCERARRDKKLSAPTASATAAHLPVRWPKGAAAPRASAALEGEDPASNVD
                     MRVKKSA"
     gene            6013..6603
                     /locus_tag="VNY79_04645"
     CDS             6013..6603
                     /locus_tag="VNY79_04645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding domain-containing protein"
                     /protein_id="HWX71764.1"
                     /translation="MRDRRHKNRRGAAAGAIGAAASVGFRLWAKIAHRPIDSLAVLGA
                     GAACLTIVVNAVFLQSGSHPAPFFANPARPQLADTGPTAATTAPAPAPPRPVEATAAV
                     HPPAAPRAQAPALRRNDPIAELIGASIGSPSRVLAVQRALSEFGYGQIKVSGTLDQAT
                     AAAIEKFEGDHKLPVTGRISDRLLSELASMTGHSLQ"
     gene            6776..7123
                     /locus_tag="VNY79_04650"
     CDS             6776..7123
                     /locus_tag="VNY79_04650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1491 family protein"
                     /protein_id="HWX71765.1"
                     /translation="MRLKTALWVAAYLRRCEVEGVFGVVRRRGAEEAGAVFVRISRLD
                     GTSDLFGPAPQSAFEAAQGTARAFTSSLAALPAADTEVEAYLAREVKFDPDVWIVEIE
                     DRAGRNFLDIVAA"
     gene            complement(7184..8233)
                     /locus_tag="VNY79_04655"
     CDS             complement(7184..8233)
                     /locus_tag="VNY79_04655"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2336 domain-containing protein"
                     /protein_id="HWX71766.1"
                     /translation="MEIASLAGLDGLADLGLRSGADMRPTLLRILTDLYVQKFRHTPA
                     EERHYTELALRLLDAVEVGTRAAVAGKLAHHLSPPLPVLQHLSRDVAEVAEPLRAHPL
                     LQPPAPAQATAPQPAQAHVPASDTEHDVADADEPFADVAAVVDPAIAGELNEMFFAAD
                     VDERRLILLNLHVVAPLPPDGLGLARDPSVGQRLEAAALARGREDFAQHLVRALRIPR
                     TQARRIVHDHLGEPVIVAAKALEVPRDALYRILLFVNSAVGHSVERVHALAALYDEIS
                     TQAAEGMVAIWQALRNTERARPKYQPVTWNETHARARPAAGQRSSPLAAPPAGTQRAL
                     VHRGARSAGSPSTRE"
     gene            8314..9156
                     /locus_tag="VNY79_04660"
     CDS             8314..9156
                     /locus_tag="VNY79_04660"
                     /inference="COORDINATES: protein motif:HMM:NF026010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71767.1"
                     /translation="MIPKGVNDKLGRGSGLIRYNAARRALAEAHRIDEVQFIRNRAFA
                     LQAYAKQAKDTTLITQATEIRLRAEAALANCCTISRKTKEPFQWRSELRREEGHEARS
                     GPYTVADAVGDYLKAFTRRGGKSVYDARRAAETHILPVLGSLRVAKLTAKRIEDWHHD
                     LHRSLSAVSRSWVRVWVGTSGRWLVSAGDTRRPENSCLRCRRESAAGPQQGPRTTETP
                     GGRQQRGRRSQAPGDGKPHPDRPQGCGEPCLEGWARRQRRRLAPGAAIQVGGDGPRAV
                     SVAI"
     gene            9134..9334
                     /locus_tag="VNY79_04665"
     CDS             9134..9334
                     /locus_tag="VNY79_04665"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HWX71768.1"
                     /translation="MPYLSQSECARLVNACKPEFRNLVRGALLTGCRYSELAAMRVDD
                     FNPDAGVVTIRENKAGKPRQAP"
     gene            complement(9288..9491)
                     /locus_tag="VNY79_04670"
     CDS             complement(9288..9491)
                     /locus_tag="VNY79_04670"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71769.1"
                     /translation="MSQPPAFTFFPWLRRGLAAGIEQDDDANALDHVSLLATATTGAG
                     DARPIKLRLMGPDAACRPCSRGS"
BASE COUNT         1728 a         3238 c         3362 g         1582 t
ORIGIN      
        1 tcaagccggc cgtgccgctc aagcgatcca tcacgtccga ctatcttgtc tgccttgagg
       61 acgggaaaaa attcaagtcg ctcaagcgtc acctgcgcac acagtacggc atgacgccgg
      121 agcagtatcg cgagaaatgg ggcctgccgc cggactaccc gatggtggcg ccgaactacg
      181 ccgcggcgcg atcgcaattg gccaagcaga tgggccttgg ccagcagcgc cggcgccgcc
      241 gcgagcgcgg ttgacgctgt tcgcgctctg gcaaacgggc agagcgcgct tcggggttgc
      301 gccggcgtgc gcgccgatca gcgctgcagc acgccgatca gccggttcgc gaagctcagc
      361 cgctcggtca tgacggcaat cacatagccg agcaaggcct ggctcagcga cgggcactcg
      421 cgcttgatgg tttcgtaggc gctgacgtcc agttcgtaga gcacgctcgg gacctcggct
      481 tgaatggtcg cgctgcgcgg ccgccgggcg atcaggccca tctcgccgat cgtcgtatgc
      541 gggccgaggc tgcgcacgcg gaccgaccgc ccgtcgccga ggtcgacgat gatgccgagg
      601 cgaccctcga ggatgaaatg catcgaggcc gccgcgtcgc cctgtcgggc gacaacctcg
      661 ccggcctgaa cttcgagccg ccggcagtat ccggcgaggg agtcggcaag ttcggagctg
      721 tcgagcgcct cggtcagcca ggcgctcaac gatctggcgt cgccggcttt cgcctggtgt
      781 gcgttgatga tttcgcgctc gcacgattcc agcgcccggt cgagatcgga cgcgacgacg
      841 acgtcgtccg cgacgaaccg ggcggtacgg aacgcgcgtt ccaggtccgg ggcgagattg
      901 accagcacga tgcgcgcgcc gctttcagct gccgcttgct tcatctgggc aaagctgtgc
      961 gttgccgagg aatcgatgcc ggtgacatgg cggaaatcga agatcagaaa acggcactcg
     1021 gggtagttct tgatcaggtc cttgacgtgc tgatacagcc ggttggtgga gccgaagaac
     1081 agatagctct gcagcgccat gccctgaatc tcgcgtccgt aggcggtgag aagcgacagc
     1141 tcgtcggggc cgcggtcgag cgaagagcgg aattccgatc catcgaagct gaacttgatc
     1201 gcgttgacgc ggccgacgct caacgcaaat gtggcgcaac cgatcacgat cccgatcagg
     1261 accccggcga tgaaccccca ataaacaatg aggaaggtaa tcgagatcag cgacaaatat
     1321 tccggcaggg ccagttgccg cgaggaacgg atcagccatt gatagagcag gcctgacccg
     1381 agaaagaaca acactccgcc gaggacgtat ttcggaacgc cgccgaggat gcccggcccg
     1441 atcagcagca gcaccgcgca gatcgcggcg acggtcagtc cgcagattcg ggtggtcgcg
     1501 ccggcgagcc gaaccaggac cgaacggctg atcgaggtgc agctgacgat tccgccgagc
     1561 gccgcagtca cgatgttggc gaagccgagc gcccggaggt cacggtcgat gttggcctct
     1621 gttcgcgtgg cgatctcgat gccggtggtg ttgagcagca gggtgatgcc ggtgacgaag
     1681 atgacggcga tcgcgtcgcc ggcaagcgac ggcaccgccg cccaggggaa atcacggagc
     1741 tcctcaagct tccacggtag ggtcagatgt ccggccggct gcggctgaaa gagccagccg
     1801 gcgacctgtg cctgcgcgag cgaggagccg gccgatagca aagcaaggtg cgtaatggcg
     1861 gtcgcagcga cgagcacgac ggggagaacg taggcgtttt gcttgtattg ggtcgccacg
     1921 tggagaacga gcgcaaccgc cacgccggcc gcgatcttgg cggcgaccgg gccgctgatg
     1981 aaagcgccga gattgtcgag ggtcaccttc tggttggtga tcacctggac cgcgccggtc
     2041 accatcagcc agccggtggc gccgagaaag ccgccgatca ccggatacgg aacaaagcgg
     2101 atggcgcgcc ctgcgcgcgc gaagccgagc acccaaagga ctgctccggt gaccgcggtg
     2161 gtcagcgaca acgcgatgag ggctgggccg agcagccgcg tgccgccatg ggcgagcaga
     2221 tagttcgcca aggtagccac gagcgccgcc aacaccacgg agatggaact gtcagggccg
     2281 gcgatcgcaa acggcagcga actgcgccag gcgacgatcg cggcaccaac ggcggccgaa
     2341 aggaacgtca ccgctacgcc gtaggcgagc gcgttttcga gcggtccggc gaagatgagc
     2401 gcagcgtagg acaaggaata ggcgatcgac agcacactgc cgaccgcgcc ggcaaacacg
     2461 tccgtcaagg cggcgcggag ctttgggcta ccgaacgcgc tgtccgctcc ggctaggccg
     2521 acggccattg ctagaccttc ccagtaccca acggtgcaac gatccgagcc ccgggcacga
     2581 ggtttacagt acgatcggca gactggccag gattgacgtg tgcatcggcg gggccggtgc
     2641 cgccggcgac cccgcgcgag cgcctatgcg gcggtgtcgt ccgctcatac cgtggcggtt
     2701 gcgagcgcgg cgcgcgcatc cgagcggatg cgctccacca tcgaacgaaa gccgttggag
     2761 cgctgcggcg tgaggtgctc gcgcaagccc aatcgctcga acagcgccaa cgcgtcgctg
     2821 gcgagaatgt ccttcgctgc cttgcccgaa tagatggcga agaggatcgc gatcagtccg
     2881 cgcacaatgt gagcatcgct gtcgcccgca aaggtaagca cgggcccgcc ggcgccgttc
     2941 gggcgcaccc cggtgtcgag ccagacctgg ctcgcgcagc cctgaacctt gttcgcatcg
     3001 ttgtgcgccg cctccgcgag cggaggcagt tcccgcccca actcgatcag atagcggtaa
     3061 cggtcgtccc agtcatcgag gaccgagaaa ttgtcgatga tgtcgccgat gtcggccatc
     3121 gcggagcgtc cagttcaccc cgtatataga gtgccgcgcc gccgaggtcg atgtcgttgg
     3181 ggttaccgct ttgctccgcc ccgcgccgaa gacgccgggc gaggaccgtg ttatgccgcg
     3241 tgcttgccgt ccttccgcgg ctgcggtccg cgccagacag gggcgaggtc ggcgggagtg
     3301 agcgtgttct gggaagcacg ctgcggcgat ttggtctgcg ctgtttttgc atcgccgccg
     3361 ttgccagcgc cgcgcgtgag ggagccggtg tcgtgcggcg cgagcgcttc gctcagaacg
     3421 tcgtaaagca ttttcgcccc ggcctgcgct ttgtagccga tcgccgtcgc caagtgcgag
     3481 ccgacggtgc aagcatcggg ctggcgcgta caaaagccgc gcagatcttc gacggcggcg
     3541 gaggcggccg agatcgcgtc gccagtgccg acgtcgttag tcgagagacc gcgctgcgtg
     3601 aagctgctgg gcagcaggat cagcacgacg ccgagccaga acgccattcg caacaggaag
     3661 aacatgacac ccgcatcccc tgcggcatag cccgccgcac ctgtgcgcaa gctagtaggc
     3721 ggcattgaaa gtgacgttgg caggtcgggg acgtttttac tcataatcga agagaatacg
     3781 cggcaaattt tcacgcaatt cgaacaaata tgattaccta aaatttgcgc caatattccg
     3841 cgatgcaagc gcgcgtgatg ctgtcgccgt gcgcaacacc gtccttgctc cagcgggccg
     3901 cccacccttg ccctgcagcc gccggcgctc gagtgtccgc ggcggcaacg gcccattcac
     3961 catgatcgac gaatccccgc gccggcgcgc acgcggtttg tggcgccatc gttctggcac
     4021 ggccggcgcg cggcgcctta gcgttcgctt aagcggcctc tgacacgatc gcgcgacaga
     4081 acactgggga gcgcgtctgc aacggcgggc gtgtcgtcgg gaacgtggcc ctcttcgcgg
     4141 cggtacggga atatatcgag acgctggtcc atccgtcggc gcgacaggac gcgctggcga
     4201 cggcgcgcca tcgcgccttc atcgcgccgc ggctgctcgg gagcgtcatc gcgctggcct
     4261 cgttcccgat ctatctgctt gcccgcggcg cgccgagcgc aaccgagctg atggtgtttg
     4321 catggctcgt ggccccgatc ctcaccgcct actttctctc ccgcaccggc cgctacgaga
     4381 gcgcccacgt gctctcgtcg ctggcactga ccggattggt gacggtcgtt gcggcttcga
     4441 ccggcggaat ttcctccttc gccgccatct ggctcgtcgt ggtgccgctc gaagcggcgc
     4501 tatcggcgtc gcgccgggtc gtcgccaccg cctcgacgct ggccctcggc gctgccggcc
     4561 tgctggtgat tctcggcctg ctcggtgtgc tccccgacac gggcgtcagc ggttacggac
     4621 cgctcgccgc gctcggtatc gtttccgccg cgctctacgc ggcggggctt gcgctcggcg
     4681 ccgaagcgct ggcgcgcacg agcttctggc tgctctacgc tgaagaggac cgttaccggc
     4741 tgctggcacg caacatgacc gacgtcatca cccgccacgg ccgtgacggc tcggtgctgt
     4801 tcgcctcgcc ggccgccgaa tcgttgttcg gttgcccgat cgtcgaattg catgagcacg
     4861 gcctgttcga gcgcgtcaac gtcgccgacc gtcccgccta tctcacggcg ctcggcgacg
     4921 ccgctgcctt gggcgaggat cgttcggtcg agttccgcgt gcggcgcgag aattttgacg
     4981 ccaacggcca tgcggcgacg cagttcgtgt ggatcgagat gcgctgccgg ccgctggaac
     5041 gggcgacggc cgaggccggc aacgacgcca acctggaagt ggtcgcggtg ctgcgcgacg
     5101 tgaccgaacg caagcggcag gagcaggcgc tcgaggactc gcgcatggag gcggagcgcg
     5161 cgaatgccgc caagggccgc ttcctcgcca ccatgagcca cgaactgcgc acgccgctca
     5221 acgccatcat cggcttctcg gaaatgctga tgaaggaatc ggtgctggcg ctcgatgccg
     5281 gacgccgcaa ggaatatgcc ggcctgatca acggttccgg gcaccacctc ctggcggtga
     5341 tcaacggtat tctcgacatg tcgaagatcg agaccgacaa tttcgagatc acgccggagc
     5401 ccttcccgcc cgcgcaggcc attgccggtt gctgcgacct tctggcgctg cgggcgcgcg
     5461 aagccggcgt cgagctggaa aaggtcgtct ccgacgatct ccccgacgtg atcgccgatc
     5521 ggcgcgcgct cggtcagatc ctgctcaacc tcctgtccaa cgcgatccgg ttcaccgacc
     5581 gcggcggcaa ggtgacgatc agcgcccgcg ccgaagcggc aagcatcatc ttcgtggtcg
     5641 acgacagcgg cgtcggcatc agcagcgagg atctgccgcg ggtcggcgaa ccgtactttc
     5701 aggcacgcgc gtcctacgac cgccgccacg gcggcaccgg cctcggtctc tccatcgtca
     5761 aaggcttgct ccggctccac ggcggcgagc tggcgatacg cagccggctc ggcgagggca
     5821 cgcgcgtcac cgtgcgcatg cccctcgatt gcgagcgggc gaggcgggac aagaagcttt
     5881 ccgcgccgac cgccagcgca acggctgccc atttgccggt ccgctggccg aagggcgcgg
     5941 cggccccgcg ggcaagcgcc gcgttggagg gcgaagatcc cgcctcgaat gtcgacatgc
     6001 gggtaaagaa aagtgcgtga ccgccgccac aaaaaccggc gcggagccgc agccggcgcc
     6061 atcggcgccg ccgcctcggt cggctttcgc ctttgggcga aaattgcgca ccgtccgatc
     6121 gactcgctgg cggtcctcgg cgccggtgct gcctgcctca cgatcgtcgt caatgcggtt
     6181 ttcctccaat cgggctctca tccggcgcca tttttcgcca atccggcacg gccgcagctg
     6241 gccgataccg gcccgaccgc cgcgaccacc gcacccgccc cggctccgcc gcggccagtg
     6301 gaagcgactg ccgcggtgca tccgcccgcc gccccccggg cgcaagcgcc cgccctgcgg
     6361 cgcaacgatc cgatcgccga actcatcggg gcgtcgatcg gctcgccgtc gcgcgtcctc
     6421 gccgtgcagc gcgccctctc cgagtttggc tacggccaga tcaaggtctc cggtacgctc
     6481 gaccaggcga ccgccgcggc gatcgagaag ttcgaaggcg accacaagct gccggtgacc
     6541 ggacgcatct ccgatcgcct cctgagcgaa ttggcctcca tgaccggaca ttcgctgcaa
     6601 tagtccgctg caggagcgga gccgacgcgt cagctcgccc ggcgcgctcg atgacggtcg
     6661 ggtactgcac cgcaattgat gatgatatcg tcgagcaacg acgggatgtg tcgcgtttct
     6721 cgccgtttgc agttatgcag tctgcgctcg cgcggcggga ccggaatgac ggaagatgcg
     6781 tctcaagact gcgctttggg tcgccgccta cttgcgccgc tgtgaggtcg aaggcgtatt
     6841 cggtgtcgtg cgcagacgcg gcgccgagga agcgggggcc gtattcgttc gcatcagccg
     6901 gctcgacggc acgtccgatc tgttcggtcc tgcgccgcag agcgccttcg aggctgcaca
     6961 aggtactgcc cgggcgttca cgtcgagcct cgccgcgctg ccggcggccg acacggaagt
     7021 ggaggcctat cttgcccgcg aagtgaaatt cgacccggat gtctggatcg tggagatcga
     7081 ggatcgcgcc ggccgaaatt ttctggatat tgtcgccgcc tgagcgaggc atgctggcga
     7141 agagcttgat gagatgccga gcgacgctgg caacgtttcc cgctcactcc cgcgttgacg
     7201 gcgacccggc ggagcgcgcg ccccggtgca cgagagcgcg ctgggtccct gccggtggcg
     7261 cggcgagcgg cgagctgcgc tgccctgctg ccggacgtgc gcgcgcgtgc gtctcgttcc
     7321 aggtcaccgg ctgatacttc ggccgggcgc gttcggtgtt gcgcagcgct tgccagatgg
     7381 caaccatgcc ctcggccgct tgcgtgctga tctcgtcgta aagcgccgcc agggcatgga
     7441 cgcgctcgac cgaatggccg accgcggaat tgacgaacag gagaatgcga tagagcgcgt
     7501 cgcgcggcac ctcgagcgcc tttgccgcga caatgaccgg ctcgccgaga tggtcatgca
     7561 cgatgcgccg ggcctgcgtg cgcggaatcc gcaacgcgcg gacgaggtgc tgggcgaaat
     7621 cttcgcggcc gcgggcgagc gccgctgcct ccagccgttg gcccaccgac ggatcgcgcg
     7681 caaggcctaa accatcaggt ggaagcggag cgacaacgtg gaggttgagc agaatgaggc
     7741 gccgctcgtc tacatcggcc gcgaagaaca tctcgttcag ctcgccggct atcgccggat
     7801 caaccacggc cgcgacatcc gcgaacggtt cgtccgcgtc cgccacgtcg tgttcggtat
     7861 cgctcgcagg gacgtgcgct tgcgcaggct gcggcgccgt cgcttgcgcc ggagcgggcg
     7921 gctgcagcag cgggtgcgcg cgcagtggct cggcgacttc ggccacatcg cggctcaaat
     7981 gctgcagcac cggcagcggc ggcgaaagat ggtgcgcaag cttgccggca acggcagcgc
     8041 gcgtcccaac ctcgacggcg tcgagcagac gcagtgccag ctcggtgtag tggcgctcct
     8101 ctgcgggcgt gtgcctgaat ttctgtacgt agagatcggt gagaatgcgc agcaaggttg
     8161 gacgcatatc ggccccgctg cgcaagccga gatcggcgag gccgtcgagg ccggcaaggc
     8221 tcgcaatttc cattcggacg ttactcgttc gccacagagg aacgggcaat gagcataagc
     8281 cgttgccgtt agcggcgcgt taagcctaag cttttgattc caaaaggggt aaacgacaaa
     8341 ctggggcgcg gaagcggcct gatccgctac aacgccgccc gccgcgcgct ggccgaggcg
     8401 caccgcatcg acgaggtgca attcatccgc aacagggcgt tcgcgttaca agcctacgcg
     8461 aagcaggcca aggacacgac gctcatcacg caggcgaccg agatcaggct gcgcgccgag
     8521 gccgcgctgg cgaactgctg cacgatatcg agaaaaacca aggagccgtt ccagtggcgt
     8581 tccgagctgc ggcgcgagga gggccacgaa gcccgcagcg gtccctacac ggtcgccgac
     8641 gcggttgggg actatctgaa agcgtttacg cggcgcggcg gcaaatccgt ctatgacgcg
     8701 cggcgggcgg cggaaacgca tattttgccc gtgctcggct ctttgcgggt cgccaagctg
     8761 acggcgaagc ggatcgagga ctggcaccac gatctacatc gttctttgtc ggccgtgtca
     8821 cgatcgtggg tgcgcgtgtg ggtggggacg agcggtcggt ggctcgtatc agcaggtgac
     8881 actcggcggc cagagaactc gtgccttcgc tgtcgccgag aaagcgccgc gggtccgcag
     8941 caaggcccgc gaacaaccga aacaccggga ggccgacaac agcgtggacg gcgttcgcaa
     9001 gcgccgggcg acggcaagcc gcatcctgac cgtccgcaag gctgcggtga accatgcttg
     9061 gaaggctggg cacgtcgcca gcgacgacgc ttggcgccgg gtgcggccat tcaagtcggt
     9121 ggtgacggcc cgcgtgccgt atctgtcgca atctgaatgc gcccgcctag tcaatgcctg
     9181 caaaccggag ttccgcaatc ttgttcgcgg tgcgttgttg accggctgcc gatattcgga
     9241 acttgccgcg atgagggtag atgatttcaa tcccgacgcc ggcgtggtca cgatccgcga
     9301 gaacaaggcc ggcaagccgc gtcaggcccc atgagccgga gcttgatcgg ccgggcatct
     9361 ccggcgccgg tggtcgcggt cgccaggagc gacacgtggt cgagagcgtt ggcgtcgtcg
     9421 tcctgctcga tcccggcggc gagaccccgg cggagccagg ggaagaaagt gaaggcgggg
     9481 ggttggctca tgcggccttg tggagcgcga cgactcaatg tgcatttatc gccggaagct
     9541 gaggcctatt tcgccaaaaa gggctgcaaa gtcctgcgac ccccgaggcg atccacgagt
     9601 tcaaccggtc gcatgaaaag aagattggga tgtttcacgt gacctgctga aaacggaccc
     9661 ttgagttgcc ggccgccaag gagccagcga agctttcccc ggcgaccggc gacttgttcg
     9721 acaacgagag ccggccatgc tcatcgccgg gcgcagctcc caggactgca cgctgctgcg
     9781 cgagccgaga cgagcgcttc aggcccgtat cgccgaaacc ctcgaaagcc aattcgccga
     9841 gactgccgag agccagcccg agatcctggc acgccactgc accgaggctg ggctgatcga
     9901 gaaggccgcg
//
LOCUS       DATMQB010000146         3559 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4073548, whole genome shotgun sequence.
ACCESSION   DATMQB010000146 DATMQB010000000
VERSION     DATMQB010000146.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3559)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3559)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3559
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4073548"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..833)
                     /locus_tag="VNY79_04675"
     CDS             complement(<1..833)
                     /locus_tag="VNY79_04675"
                     /inference="COORDINATES: protein motif:HMM:NF020390.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1800 family protein"
                     /protein_id="HWX71770.1"
                     /translation="MTSKDDWVNDLDPIQPADWDRARAKHLLNRAGFGGTPEDIDRLA
                     TLTPVEAVRRIIDYEKVENGDLPAFEHSGVYDPTLKVFPPSRPATTRKAETTGEAIGV
                     RVKPGGSRRMQPVVDRFFFWLRATALETRRIAAWWADRMVSTDRPLQEKMALFWHGHF
                     ATGADKVRDYRKMLVQLELFHQKGTGNFRELLIAVAQDPAMLVFLDAGQNVKGAPNEN
                     FGREVMELFTMGVGNYSEHDIREAARAFTGWTNDDLRFKLDEAKHDTGEKEFLGRRGN
                     F"
     gene            complement(960..1256)
                     /locus_tag="VNY79_04680"
     CDS             complement(960..1256)
                     /locus_tag="VNY79_04680"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71771.1"
                     /translation="MRLETHIDELAAKIENCRKFILAVRVATWGGGVILVAMLVGAIR
                     LDPATMAGASAALLGGIVVWGSNNSTAKEARKELAVAEAHRAALIETIDLRAIS"
     gene            1390..2220
                     /locus_tag="VNY79_04685"
     CDS             1390..2220
                     /locus_tag="VNY79_04685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71772.1"
                     /translation="MPPEPRLILTADSITRVGAEANGAVVVNGSHGGLYAAYLAAKLG
                     VAAAIFNDAGIGRDRAGVAGVDYLAELGVPAAAVGNMTARIGDGADMMARGIVTYVNL
                     LAAALGCQEGTSCRDASHALAQAAARELAPPPLRESDTLLMAEPPAVWALDSAAAVGP
                     EHVGMIVVTGSHGGLLGGRPETALKYDALAALFNDAGIGIDEAGVTRLPALDARNIAS
                     ATVAAASARIGDARSTYEDGILSRVNSCAAALGAAPGTSAREFVAIVRRAAAEREKQA
                     "
     gene            2217..>3559
                     /locus_tag="VNY79_04690"
     CDS             2217..>3559
                     /locus_tag="VNY79_04690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018689609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HWX71773.1"
                     /translation="MSKATEPSNRPSGRMNGGRAMAEMLRLAGAGPMFGMGGFQLLPF
                     YDALAQLGMQHFLINDERCGAFAAEAYARVTNRPGICDGTLGPGATNLVTGLIEALNA
                     GTPIVAFAGDTHRAHSWKNMTQECRQVEILRPAVKELIRVEQTSRIPELLRRAFAVAT
                     SGRPGPVLLDVPEDVCHGQHEFAAEDFVIDATTLRVPARRIRPDRADIGRAAALLAHA
                     ERPLILVGGGIHLSGAYDALLGLAEAQSIPVAHTMSGKGGMACTHPLSAGLFGRYSRI
                     ANDLIETSDCLLVVGCKLGEIATKRYALPSRPIPTIHLEIVAEEIGRCLPAEVALWGD
                     ARAGLEDLAEALAEDSRHARATRAEYVAEIPKRMAAWRDEARPRIESDERPIHMARLC
                     RELNRALPAESILVADGGFAAHWTGLLYDTKIAGRHFIPDRGLASIGYGLPGGIGA"
BASE COUNT          583 a         1215 c         1134 g          627 t
ORIGIN      
        1 tcgaagttgc cgcgcctgcc gaggaattcc ttctcgccgg tatcgtgttt cgcctcgtcg
       61 agcttgaagc gaagatcgtc gttggtccag ccggtgaacg ctctcgccgc ctcgcggatg
      121 tcgtgctcgc tgtaattgcc cacccccatg gtgaagagtt ccatgacctc gcggccgaag
      181 ttctcgttcg gggcgccctt tacgttctgc ccggcgtcga gaaaaaccag catggccggg
      241 tcctgggcca cggcgatcaa cagctcgcgg aaatttccag tgcctttctg atggaacagc
      301 tcgagctgga ccagcatttt gcgatagtcg cggaccttgt cggcgccggt ggcgaaatgt
      361 ccgtgccaga acagcgccat cttctcctgc aagggacgat cggtggacac catgcggtcc
      421 gcccaccatg ccgcgatccg gcgagtctca agcgcggtgg cgcgcagcca aaagaagaat
      481 cggtcgacga ccggctgcat tcggcgcgac ccgccaggct tcacccgcac cccaatggct
      541 tcgcccgttg tctcggcctt gcgcgtcgtc gccggacggc tcggcggaaa caccttcagc
      601 gtcgggtcat agacgccgga atgctcgaac gccggaagat cgccattctc gaccttctcg
      661 tagtctatga ttcgccgcac ggcttcgacc ggcgtcaatg tggccagacg gtcgatgtct
      721 tcgggcgtac cgccgaatcc ggctcgattg agcagatgct tcgcgcgtgc gcgatcccaa
      781 tccgccggct ggatcggatc aagatcgttc acccaatcgt ccttagaagt catcgccatg
      841 ctcccgaaat aaggcggcga ccagccacaa aactccgccg ggatttatac ggcgtttccg
      901 ctcgtagcgc acttccttcc gagccccgtc aagccccggc tcgagcagtc gcgccccagt
      961 caggatatcg cacgcaggtc gatcgtttcg atcaatgcgg cccgatgtgc ttcagccacc
     1021 gccaactcct tccttgcttc cttcgcggtg ctgttgtttg aaccccacac gacgatgccg
     1081 ccaagcaacg ccgcgctcgc gcccgccatc gtggccgggt cgaggcggat tgcgccgacg
     1141 agcatggcga caaggataac gccgccaccc cacgtggcga cccgcacggc gagaatgaac
     1201 ttgcggcagt tctcgatctt ggccgcgagc tcgtcgatgt gcgtctcgag gcgcacgatc
     1261 tcatcccgtg gattgccgcc gttttccccg gtgtacaacg ttcaacactc caaaacgagc
     1321 ggacccggct tgtgcacatc cagccgcgcc cggcatgatg gcggcaagct cactccttcg
     1381 aaacggtcca tgccccccga gcccaggtta atcctcactg ccgacagcat cacccgcgtc
     1441 ggcgccgaag ccaatggcgc cgttgtcgtc aatggctcgc atgggggcct ctatgctgcg
     1501 tacctcgcgg ccaagctcgg cgttgcggcg gcgattttca atgacgccgg gatcgggcgc
     1561 gaccgcgccg gcgttgccgg ggtcgactac cttgccgaac tcggcgtacc ggcggccgcg
     1621 gttggcaaca tgaccgcgcg catcggcgac ggcgccgata tgatggcgcg aggcatcgtt
     1681 acgtatgtaa acctgctggc agccgccctt ggctgccagg aaggcacctc gtgccgtgac
     1741 gcctctcacg ctctggcgca agcagcagcg cgcgagctgg cgccgccgcc cctgcgcgag
     1801 tcggatactc tgctgatggc cgagccgccc gccgtgtggg cgctcgactc cgccgcggcg
     1861 gtcggccccg agcacgtcgg catgattgtc gtcactggat cgcatggcgg actgttgggc
     1921 ggacggccgg aaacggcgct caaatacgac gcgcttgcgg cactcttcaa cgatgccggt
     1981 atcggcatcg acgaagccgg cgtgacacgg ctcccggcgc tcgacgcgcg caacattgcc
     2041 tccgccacgg tcgcggccgc aagtgcgcgc atcggggacg cgcgctcgac ctatgaggat
     2101 ggtatcttgt ctcgcgtcaa ttcctgcgcc gccgcccttg gcgccgcgcc gggcaccagc
     2161 gcacgcgagt tcgtcgccat tgtccgccgc gctgcggccg agcgagagaa gcaagcatga
     2221 gcaaagcgac cgagcccagc aaccgtccct ccggccgcat gaacggcggc cgcgccatgg
     2281 ccgagatgct gcggctcgcc ggggccgggc ccatgttcgg catgggcggc ttccagctct
     2341 tgccgttcta tgacgcgctg gctcagctcg gcatgcagca tttcctgatc aacgacgagc
     2401 gctgcggcgc ctttgcggcc gaagcctatg cgcgggtcac caatcggccg ggaatatgtg
     2461 acggcacgct cgggccaggc gccaccaacc tggtgaccgg cttgatcgag gcgctgaacg
     2521 ccggaacgcc gattgtcgca tttgccggcg acacccaccg cgctcactcc tggaagaaca
     2581 tgacccagga gtgccgccag gtcgaaattt tgcggccggc ggtcaaggag ctgatccggg
     2641 tggagcagac gagtcgcatt cccgaactct tgcggcgggc cttcgcggtc gcgacctcgg
     2701 gccggccggg acccgttctg ctcgacgtgc cggaggatgt ctgtcacggc cagcatgaat
     2761 ttgccgccga ggattttgtg atcgacgcga cgacgttgcg cgtgcctgcg cggcgcatcc
     2821 ggccggaccg cgcggacatc ggccgcgccg ccgctttgct tgctcacgcc gagcggccgc
     2881 tcatcctcgt tggcggcggc attcatctct caggggcgta cgacgcactg ctcgggctcg
     2941 ccgaggctca gtcgataccg gtcgcgcaca ccatgagcgg aaagggcgga atggcctgca
     3001 cacacccgct ctcggcgggg ctgttcggcc gatattcgcg gattgcaaac gatctgattg
     3061 agacgtcgga ttgtctgctc gtcgtcggct gcaagctggg cgagatcgcc accaagcgct
     3121 acgcactgcc ctcacgcccg atcccgacca ttcacctcga gattgtcgcc gaggagatcg
     3181 ggcgctgcct cccagccgag gtggcgctgt ggggcgacgc ccgggctggg cttgaggatc
     3241 tggccgaagc gctcgccgag gacagccggc acgcccgcgc cacccgcgct gaatatgttg
     3301 ccgagatccc aaaacgaatg gcagcgtggc gggacgaagc ccggccgcgg attgaatcgg
     3361 acgagcggcc gatccacatg gcgcggctat gtcgcgaact caatcgtgcc ttgccggcgg
     3421 agagcatcct cgtcgccgat ggcgggtttg ccgcgcattg gaccgggctc ctctacgata
     3481 cgaaaatcgc cggtcggcat ttcatcccgg accgcggcct ggcttcgatc ggctatgggc
     3541 tgcccggcgg gatcggggc
//
LOCUS       DATMQB010000147         2378 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1595720, whole genome shotgun sequence.
ACCESSION   DATMQB010000147 DATMQB010000000
VERSION     DATMQB010000147.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2378)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2378)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2378
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1595720"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..597)
                     /locus_tag="VNY79_04695"
     CDS             complement(<1..597)
                     /locus_tag="VNY79_04695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HWX71774.1"
                     /translation="MMDLILVKIFATALALSEVMIQPQAVKTHFDAVADQDKVVQTLR
                     AGCAHMRRAFDIESINVDDLISTALNDQKAVGTGIKAFHGINFADLNVAYHRFCKNEN
                     VGDSVVDLGQVIEFFNDAAADLPDHTRLKGRKLPSMTAILDGKGANFADVFEPSNRRI
                     WVSLDDIPESVQKAFVAAEDRRFYQHHGVDERGIIRAFM"
     gene            complement(800..2161)
                     /locus_tag="VNY79_04700"
     CDS             complement(800..2161)
                     /locus_tag="VNY79_04700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HWX71775.1"
                     /translation="MAIPGTAGGGTAARASFAQTLAVYLKPRVLVVMFLGFSSGLPLA
                     LSGGTLLVWMREVGIDLGTIGLFALVGTPYTVKFLWAPLIDALDVPVLSRRLGRRRGW
                     LLLSQFLLIAAIVFLGASDPAASPLIVAVGALMVATASATQDIVVDAFRVESLSESEQ
                     AAGMASYVAAYRIGMLVSTAGALFLVSGFESFAGFGRHAAWSAGYTVMAALVLVGIAT
                     TLIAREPEKSAQAAAAHARADSLTRVVEAAVGAFSEFLSRDLALVALAFVVLFKFTDA
                     LSGAMTAPFVIDLGFSRAEYAAIIKGVGLAALLIGGFAGGFLARACSLPVSLWIGGAL
                     QAVANLAFSWQAVVGLDARWLTFAIVVENFTSAIGTVIFVAYLSALCRNPLHTATQYA
                     LLTAFAAFGRTYLSSGAGFIAGATGWAWFFAICALAGLPSLLLLAFLQRRGHFIGLSP
                     EKR"
BASE COUNT          493 a          757 c          772 g          356 t
ORIGIN      
        1 catgaaggcg cggatgatgc cgcgctcgtc cacgccatga tgctggtaga accgcctgtc
       61 ctcggcggcc acaaaggcct tctgcacaga ttcggggatg tcatcgagcg acacccagat
      121 gcgccggttg ctcggttcga acacgtcggc aaaattcgcg cccttgccat cgaggatggc
      181 ggtcatgctc ggcagcttcc ggcccttgag gcgcgtatgg tcgggcagat cggccgcggc
      241 gtcgttgaag aactcgatca cctggccgag atcgaccacg gaatcgccga cgttttcgtt
      301 cttgcagaac cggtgatagg cgacgttcag gtcggcgaaa ttgatgccgt gaaaggcctt
      361 gatgccggtg ccaaccgcct tctggtcgtt gagcgcggtg gaaatgaggt catcgacgtt
      421 gatcgattcg atatcgaacg cccggcgcat atgggcacac ccggcgcgta gcgtctggac
      481 caccttgtcc tggtcggcca cggcatcgaa atgggtcttc actgcctgcg gctgaatcat
      541 cacttcgctc agcgcgagcg cggtcgcaaa aatcttgacg aggatcaggt ccatcatggg
      601 gagggcatta ataacccggt tggaggtacg ccacttcggg aacgccgagt atagctatcc
      661 gatccttaca aaaagacttt tttacggacc cgggcggtgg tgcggcagag ccgctcgcgg
      721 caaccgtccg ggcgccacac ccgtcgacta tctccttgcg tgataagctc tatccgcgac
      781 cgcgcggctt tcagcagcat tatcgcttct ccggtgacaa gccaatgaaa tgaccgcggc
      841 gctgcaggaa ggcgagcagc agcaggctcg gcaggcccgc aagcgcgcag atcgcgaaaa
      901 accatgccca gcccgtggcg ccggcaataa agccggcgcc ggaagaaaga taggtacgcc
      961 cgaaggcggc gaacgcagtc agcaatgcgt actgagtcgc ggtatgtaaa gggttacggc
     1021 agagcgccga gagataggcg acaaagatga ccgtgccgat ggcgctggtg aagttctcga
     1081 ccacgatcgc gaaggtcagc caccttgcgt cgagaccgac gacggcctgc caggagaacg
     1141 caaggttggc gacagcttgg agggcgccgc cgatccagag actgaccggc agcgaacagg
     1201 cgcgcgccag gaaccctccg gcgaagccgc cgatcagcaa tgcggcaagg ccgacgccct
     1261 tgatgatggc cgcatattca gcgcgcgaga agccgagatc gatcacaaac ggcgccgtca
     1321 tggcgccgga gagcgcatcg gtgaacttga acaggacgac gaaggcgaga gcgaccaggg
     1381 ccaggtcgcg cgaaagaaac tcggaaaagg cgccgaccgc cgcctcgacg acacgcgtca
     1441 gcgagtcggc ccgcgcatgg gccgcggcgg cttgcgcgga cttttccggc tcccgggcga
     1501 tgagcgtcgt tgcgatgccg accagcacga gcgccgccat cacggtatag ccggcgctcc
     1561 acgcggcgtg gcggccgaag ccggcaaaac tctcgaaacc gctcaccagg aacagggcgc
     1621 ccgccgtcga aacgagcatg ccgatgcggt aggcggcgac ataggaggcc atgccggccg
     1681 cctgctcgct ctcgctcagg ctttccacgc gaaaagcatc gacgacgata tcctgcgtcg
     1741 ccgacgccgt ggcgaccatg agggcgccga ctgcaacaat aagcggcgac gccgccgggt
     1801 cggaggcgcc gagaaacacg atcgcggcga tgagcagaaa ctgcgacagg agcagccagc
     1861 cgcgtcgccg gcccaatcgc cgcgacagca ccggcacgtc gagcgcgtcg atcagcggcg
     1921 cccacaggaa tttcaccgtg tagggcgtgc cgacgagcgc gaacaggccg atcgtgccga
     1981 gatcgatacc gacctcgcgc atccacacca ggagcgtacc acccgacagg gccagcggca
     2041 gcccggagga gaagccgaga aacatgacca cgagcacacg cggcttgaga tagaccgcga
     2101 gcgtttgcgc aaacgatgcg cgggccgctg tgccgccgcc ggccgtgcca ggtatcgcca
     2161 tgcggacgcc ctagccgatt tggcgaacag tttccaacgc gttcgctctg ccgggatgcg
     2221 gaggctcgac gccgaacgag cccgcttact ctcccgcctg cagcctcggg atcggcgcgg
     2281 gaatgatatt gccgacgccg tcttcctcga aatcgacgtc cttgatgcgg tccccgcgct
     2341 gctcgatctt ttccgtcgag atcgcgatct gccgcacg
//
LOCUS       DATMQB010000148         3781 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4074420, whole genome shotgun sequence.
ACCESSION   DATMQB010000148 DATMQB010000000
VERSION     DATMQB010000148.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3781)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3781)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3781
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4074420"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1328)
                     /locus_tag="VNY79_04705"
     CDS             complement(<1..1328)
                     /locus_tag="VNY79_04705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4Fe-4S dicluster domain-containing protein"
                     /protein_id="HWX71776.1"
                     /translation="MADRHKILVCSCEDTIPLDAGALTRGCRNFDIVTGRQFCRAELD
                     RFRALVGSGVPLTVGCTQEAPLFREVAEDSGAGLRFVNLRESAGWSADAAKAGPKMAA
                     LAAAAAEPMPDIPFVQLESAGVVLVYGRDERAIEAAGLLKEHLDVTVLLTRPDQITPP
                     RTTEFPIVKGTIRVAKGCLGAFELAVDDYAVPQPSSRGALVFAPSRDNATSRCDIVLD
                     LSGGARLFPTADLRDGYLRADPGDPAAVLKTVLRTRDLVGSFDKPRYITFDPELCAHS
                     RSRIVGCHRCLDLCPTSAITPDGDHVAIDEKVCAGCGQCAAACPTGAASYSLPPSDAL
                     LRKLRALLTVYREAGGTSPVLLLYDDAHGGALIDALARHGDGLPAHVLPLAVNEVTQI
                     GIECVAAAFAYGAAAVRIVLHAKPRHDPAGLYQTIALAEAILAGVGLEGDR"
     gene            1373..2101
                     /locus_tag="VNY79_04710"
     CDS             1373..2101
                     /locus_tag="VNY79_04710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoate--protein ligase family protein"
                     /protein_id="HWX71777.1"
                     /translation="MPSSLRALDLPPPFRLVVLREAGDAFAHASAHAAELGAGTLVFV
                     GRFDLAEFAVVLEPEETLARACRSFYAGMTALADALAALAPPETPITIEWPDRLKIGR
                     RLVGGGRLGWPQSADERERPDWLVFGAVIRLVSMRSEEAVLDPLSTALADEGFGELGA
                     ERVVEGFARHLMLAIDSWQEGDFAAIVQGYLSRLQPERGARHAIDASGDLRIERPGES
                     VACLDLRAALTAPLWFRRCCFHLS"
     gene            2098..2616
                     /locus_tag="VNY79_04715"
     CDS             2098..2616
                     /locus_tag="VNY79_04715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3305 domain-containing protein"
                     /protein_id="HWX71778.1"
                     /translation="MSGPVRCIPVGVVVERRKAVSQWAEFLWRPVAVLAGLPDAAAWT
                     PLAKDGDTVTYYAGAAEIALYRSEAENYRRNLKSETPAIWVTMHTTGGEPPFAIAGVT
                     ADPAEGEGWTEPGQAIVEAVAMPETVRDEIAAFIVQFPAQPEFVRRQRDRADPAAMAR
                     QAPQIGRRDERR"
     gene            2603..3187
                     /locus_tag="VNY79_04720"
     CDS             2603..3187
                     /locus_tag="VNY79_04720"
                     /inference="COORDINATES: protein motif:HMM:NF023176.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3306 domain-containing protein"
                     /protein_id="HWX71779.1"
                     /translation="MSGDESFLARWSRRKRNVAAQADAEKNPPPSAAEIGKTVSPTTG
                     EAPPPIPLPPIESIASGSDITAFLAPGVPLELTRAALRRAWTTDLAIRDFIGMSENAW
                     DFNAPGGVPGFGSLDLQDVRRLLAQVLDEPQASDPTPVTAALTDHAATPAETAPAVHV
                     AEAPRSISAAQHEDDKRKADESRPRRHHGGALPQ"
     gene            3280..>3781
                     /locus_tag="VNY79_04725"
     CDS             3280..>3781
                     /locus_tag="VNY79_04725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009341203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone TorD family protein"
                     /protein_id="HWX71780.1"
                     /translation="MGGAAGLGEAIRVAGGVTELARRIGIWQPSVSNWSRVPADRVVA
                     VEAATGVARALLRPDLYAGTTDAVDDTAVARTQEYALLAALLARPPDAALLKRLAKLE
                     SDGTPLGLAHRALAGAAVEKDAAAVAREYFDLFIGVGRGELLPYGSYYLTGFLHERPL
                     ARLRADL"
BASE COUNT          618 a         1215 c         1307 g          641 t
ORIGIN      
        1 cggtcgcctt cgaggccgac accggcgagg atcgcctccg cgagcgcgat cgtctgatag
       61 aggcccgctg gatcgtggcg cggcttggcg tgcaaaacaa tccgcaccgc cgccgcgcca
      121 taggcgaagg ctgccgcaac gcactcgatc ccgatctgcg tcacctcgtt gacggcaagc
      181 ggcagcacgt gcgccggcaa gccgtcgccg tgccgggcca gcgcgtcgat cagcgcgccg
      241 ccatgcgcgt catcgtagag cagcaggaca ggcgatgtgc cgcccgcctc gcgataaacc
      301 gtgagcaatg cgcgcagttt gcgcagcaac gcgtcggacg gcggcagaga gtaactcgcg
      361 gcgccggtcg gacaggccgc ggcacactga ccgcagccgg cgcagacctt ctcgtcgatc
      421 gcgacgtgat cgccgtcggg cgtgatcgcg ctcgttgggc agaggtcaag acaacggtga
      481 cagccgacga ttcgcgagcg tgagtgggcg caaagctcgg gatcgaaggt tatgtagcgc
      541 ggcttgtcga agctgccgac gaggtcgcgg gtgcgcagca cggttttgag taccgcggcg
      601 ggatcgcccg gatcggcgcg taaatagccg tcccgcagat cggcggtcgg gaagagccgc
      661 gcgccgcccg agaggtcgag cacgatatcg cagcgcgatg tcgcgttgtc gcgggacggg
      721 gcgaagacaa gcgcgccgcg tgaggacggc tgcggcacgg cataatcgtc gacggcgagc
      781 tcgaacgcgc ccagacagcc cttcgcaacg cgaatcgtcc ctttgacgat cgggaactcg
      841 gtggtgcgcg gcggcgtgat ctgatcgggc cgcgtcaata gcacggtgac gtcgagatgc
      901 tccttgagca gccccgccgc ttcgatcgcg cgctcgtcgc gcccgtagac gaggacgacg
      961 cccgcgctct cgagctgcac gaacggaatg tccggcatcg gctcggcggc agcagcggca
     1021 agcgccgcca tcttcggacc agctttggcc gcgtcggccg accagccggc gctctcgcgc
     1081 aaattgacga accggagacc cgcgccgcta tcctcggcca cttcgcggaa aagcggcgct
     1141 tcctgcgtgc aaccaaccgt gagcggcacg cccgagccta cgagcgcgcg aaacctatct
     1201 agttccgccc ggcagaattg gcggccggtg acaatatcaa agttgcggca gccgcgcgtc
     1261 aaagcgccgg catcgagcgg tatcgtgtct tcgcacgagc aaacgaggat tttgtgccga
     1321 tccgccatct atcgctataa tgttcagaaa ttgggcagaa gaccatcgcg aaatgccgtc
     1381 ctctttgcgc gcgctcgatc tgccgccgcc gtttcggctt gtggtgctgc gcgaagcggg
     1441 tgacgcgttt gcccacgcct ccgcccacgc cgctgaactc ggcgccggga ccctggtttt
     1501 tgtcggaagg ttcgatctgg cggagtttgc ggtcgtgctc gagccggagg agacgctcgc
     1561 gagggcgtgc cgcagctttt atgccggcat gacggcgctc gccgatgcgc tcgctgcgct
     1621 cgcgcctccc gagacgccga tcacgatcga atggccggac cggctgaaga ttggtcgtcg
     1681 cctcgtggga ggcggtcgtc tcggctggcc gcaatctgcc gatgagcgcg agagacccga
     1741 ctggctcgtc ttcggcgccg tcattcgcct cgtttcgatg aggagcgagg aggcggtgct
     1801 cgatccgctg tcgacagcgc tcgcggacga gggcttcggg gaactcggcg cggaacgcgt
     1861 ggtcgaaggc tttgcgcgcc atctcatgct ggcgatcgac tcctggcagg agggtgattt
     1921 cgccgcaatc gtgcaaggct atctgtcgcg tttgcagccg gagcgcggtg cgcggcatgc
     1981 aatcgacgcg agcggggacc tgaggatcga gcgcccgggt gagtctgtcg cgtgcttgga
     2041 cttacgggcc gcactgacgg cgccgttatg gttccggcgc tgctgcttcc atctgtcatg
     2101 agcgggcccg tccggtgcat cccggtcggt gtcgtcgtcg agcggcgcaa agcggtatca
     2161 caatgggccg aatttctttg gcgtcccgtc gccgtcctcg cggggttgcc cgatgccgcc
     2221 gcgtggacgc cgctggcgaa ggacggcgat accgtcacct attacgccgg cgcggccgag
     2281 attgcgctct ataggtcgga agcggaaaac tatcggcgca atctgaaatc ggagacgccg
     2341 gcgatatggg tgacgatgca cacgactggc ggcgaaccgc cctttgccat cgccggcgtg
     2401 accgccgacc cggcggaggg cgagggctgg accgagcctg gtcaggcgat cgtcgaagcc
     2461 gtcgcgatgc cggaaaccgt gcgcgacgag atcgcagcct tcatcgtcca atttcccgcc
     2521 caaccggagt tcgtgaggcg ccagcgcgac cgcgccgatc ccgcggccat ggcgcgacag
     2581 gctccgcaga tcgggaggcg cgatgagcgg cgatgaatct ttccttgcac gctggtcgcg
     2641 gcgaaagcgc aatgtcgcgg cgcaggcgga cgccgagaag aatccgccgc cgagcgcggc
     2701 cgagatcggc aaaaccgttt ccccgactac cggcgaggcc cctccaccaa tccccttgcc
     2761 gccgatcgaa tcgatagcat ccggttcaga catcacggct ttcctcgcgc ctggcgtgcc
     2821 gctggagttg acgcgcgcgg cgcttcgccg ggcttggaca actgatcttg ccatccgcga
     2881 tttcatcggc atgtcggaga atgcatggga tttcaatgcc ccgggtgggg tgccgggctt
     2941 tggttcgctc gatcttcagg acgtccgtcg gctcttggcg caggtcttgg atgagcctca
     3001 ggcgtccgac ccgaccccag tcaccgcggc gctcacagac catgcggcaa caccggcgga
     3061 gaccgctccg gcggtacacg tcgccgaggc gccgagaagt atttctgcgg cgcagcatga
     3121 agacgataag agaaaggctg acgagtcccg ccctcgccgg catcatggcg gtgcgctgcc
     3181 gcaataatcg gcagttatag ccttaggcta ttgaccgtct cgccgctgcg gtattaccgt
     3241 ccctttcaat tggcgccgaa cgccatcgga gcagttttga tgggaggagc tgcggggctg
     3301 ggcgaggcga tccgggtggc tggcggcgtc accgagttgg cgcgccggat tgggatctgg
     3361 cagccctccg tgtccaattg gtcgcgcgtt ccggcggacc gcgtcgtggc ggtcgaggca
     3421 gcgacgggcg tggcccgcgc tctgttgcga ccggacctct acgcggggac aaccgacgcg
     3481 gtcgacgaca ctgccgttgc tcgcacgcag gaatatgcgc tgcttgcggc actcctcgcg
     3541 cgtccaccgg atgcggcgct gctgaagaga ctggcgaagc tcgagagcga cgggacgccg
     3601 ctcggccttg cgcatcgggc actggccgga gcagccgtgg agaaagatgc cgccgcggtc
     3661 gcgcgcgaat atttcgatct cttcatcggg gtcgggcgcg gtgaattgtt gccctatggg
     3721 tcctattatc tgaccggttt tcttcatgaa cggccgctgg cacggctgcg cgccgacctc
     3781 g
//
LOCUS       DATMQB010000149         3575 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2217392, whole genome shotgun sequence.
ACCESSION   DATMQB010000149 DATMQB010000000
VERSION     DATMQB010000149.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3575)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3575)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3575
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2217392"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            129..1391
                     /locus_tag="VNY79_04730"
     CDS             129..1391
                     /locus_tag="VNY79_04730"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HWX71781.1"
                     /translation="MKERTTGAMLKGYRVVDLGQFVAGPTCARMLAEMGAEVIKLELA
                     PFGDRGRFSGDKPRDPALKKSSQSTYFFQHNHSKKSVAVDIKQERGRALVHALVAKSD
                     VLVENFAPGVMARAGLGYDALSRINPGLIMCSISLAGQSGPLSDKPGFDYMAAAYAGL
                     TAAIGEADRGPAQLPVAIADYATGVTAAMCVGFALLHRERTGEGQYIDCSLIDTYFNM
                     HEVNVPKASLRGRQFSPPRMGSLHPDGGPTGVFRCGSGEFISLMVLPYQWPQLVKAMN
                     MPELTEDARFRDPRARRDNNRALAAVIENWLSRFASREEAMAALEAERVPCAPVLTLH
                     EAMAHPHLRERGTVRRVADQAIGEFDIPGLAAKFSRWPAAAALTADRLGEHNEDVLRN
                     VLGLSDTEIEELYRDKTIVRDPVLDGER"
     gene            complement(1418..2767)
                     /locus_tag="VNY79_04735"
     CDS             complement(1418..2767)
                     /locus_tag="VNY79_04735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HWX71782.1"
                     /translation="MPRGTARVPAKTATLDGKKQRRAPPAARARGTERRTSKRRRALI
                     IGGSMSGLLAALMLQRRGWDVDVFERVETELAGRGAGILAQAELIAHLGALGLEVRDL
                     GVVLNARKMLDAAGGVVAAIERPHLMAAWEHIYRVLREALPAPCYQRGRSFTAFTQDR
                     RGVVAHFGDGSVAEGDTLIGADGLRSTVRQLCLPAVAPLYAGYVAWRAVLPEDILPPA
                     IHRDLFATMTFCLLPGEQFVAYPITGPNGDLRPGRRRYNVVWYRPADEQKELPALLTD
                     DSGVTHPISIPPPLIPRAAIAEMRAAAERLLAPQFRAVVRLIDEPMLQPIYDLESPRL
                     AFGRVAIIGDAAFVARPHVAAGVSKAADDAAALAAALDADRVETALLRFEAERLPVGR
                     KIIERARYLGAYLQATQSAEDRSRSARHGIPQAVLAETATMDFLYPRPREERNEQAS"
     gene            2871..>3575
                     /locus_tag="VNY79_04740"
     CDS             2871..>3575
                     /locus_tag="VNY79_04740"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX71783.1"
                     /translation="MIFSFDLLVNAVVSGILIGGFYAAVTAGVSLSFGVLDIVNIAHP
                     AFIILGSYTAYLVNTTLGVDPILTSIVLAPAFYALGAAIYQIYYVSFEKRGQESLRGL
                     AFFFGLLFITEVSLVLYFGVDYRYVEASYIGPTWHFGFIDVPLRIVVPFLVSLLLIAT
                     LQLVLTRSFVGRAIMAVAQDQLALRLLAVDPIRIKRIAFGISIATASLAGAFLIIIQP
                     VEPSVGREYIGRVFAIC"
BASE COUNT          568 a         1207 c         1170 g          630 t
ORIGIN      
        1 caggtgttcg gcgtccccat gttctatttc gagaacgagc cgttctgggg atacgaccgc
       61 atgggccttc tcgagcagcg gctgaccgaa gccggcctca agcgcgagga gccgcgccgg
      121 cgcgcggtgt gaaggaacgg acaaccggcg cgatgctgaa gggttaccgc gtggtcgatc
      181 tcgggcagtt cgtcgccggg ccgacgtgcg cgcgcatgct cgcggaaatg ggcgccgaag
      241 tgatcaagct ggaactggcg ccgtttggcg atcgcggccg cttctcgggc gacaagccgc
      301 gcgatccggc gttgaagaag tcgtcgcaga gcacgtactt ttttcagcac aaccactcga
      361 agaaatccgt tgccgtcgac atcaagcagg agcgcgggcg cgcgctcgtc cacgcgctcg
      421 tcgccaagtc cgatgtcctg gtcgagaact tcgctccggg cgtgatggca cgcgccggat
      481 tgggttacga cgcgctgtcg cgcatcaatc cgggcctgat catgtgctcg atctcgcttg
      541 cgggacagtc gggcccgctc agcgacaagc ccggcttcga ctacatggcg gccgcttatg
      601 ccggcctcac cgccgccatc ggcgaggccg atcgcgggcc ggcgcagcta cccgtagcca
      661 tcgccgacta cgccaccggc gtgacggcgg cgatgtgcgt cggtttcgcg ctgctgcatc
      721 gcgagcggac cggcgaaggg caatacatcg actgctcgct catcgacacg tatttcaaca
      781 tgcacgaggt gaatgttccg aaggcatcgc tgcgcggcag gcagttcagt ccgccgcgca
      841 tggggtcgct gcatccggac ggcggtccga ccggcgtctt ccgctgcggg agcggggaat
      901 tcatctcgct catggtgctg ccctaccaat ggccgcagct cgtcaaggcc atgaacatgc
      961 cggagctgac ggaagacgcc cgtttccggg acccgcgcgc cagacgtgac aacaatcgag
     1021 cgctcgccgc cgtcattgag aactggcttt cgcgtttcgc cagccgcgaa gaagcgatgg
     1081 ccgctcttga agcggagcgc gttccctgcg cgccggtcct caccttgcac gaggccatgg
     1141 cccacccgca tctgcgcgaa cggggcaccg tgcgccgcgt cgccgaccag gcgatcggcg
     1201 aattcgacat tcccggcctt gcggcaaagt tttcccgctg gccggccgcg gccgcgctca
     1261 ccgccgaccg tttgggcgag cataacgagg acgtgctgcg caacgtcctc ggcctttccg
     1321 acacggagat cgaagaactc tatcgggaca agacgatcgt tcgcgatcct gtccttgacg
     1381 gcgagcggtg acggcgtcgg ccacagcgac gcctggtcta gctcgcttgt tcgtttcgct
     1441 cttcgcgagg acgagggtag agaaaatcca ttgtcgcggt ctcggcgagc accgcctggg
     1501 gaatgccgtg gcgcgcggag cggctgcgat cctcggcgct ctgcgtcgcc tgcagatagg
     1561 ccccaaggta ccgcgcccgt tcgatgatct tgcggccgac cggcaaccgc tccgcctcga
     1621 agcgcagaag cgccgtttcc acccgatccg cgtcaagggc cgcggccagc gcggccgcat
     1681 cgtcggccgc cttggaaacg cccgccgcca catgcggccg tgcgacgaac gccgcatcgc
     1741 cgatgatcgc cactcgcccg aaggcaagac gcgggctctc gagatcgtag atcggctgca
     1801 gcatgggctc gtcgatcaac cgcacgacgg cgcgaaattg cggcgctagg agtcgttccg
     1861 ccgccgcgcg catctcggcg atggccgcgc gcgggatgag cggcggcggt atcgagatcg
     1921 gatgggtgac gccgctgtcg tcggtgagga gcgccggaag ctccttctgc tcgtccgccg
     1981 gacggtacca gaccacgttg tagcggcgcc ggcccggtcg caggtcaccg ttgggtccgg
     2041 tgatcggata ggcgacgaac tgctcgccgg gcagcaggca gaacgtcatg gtggcaaaga
     2101 ggtcgcggtg gatcgccggc ggcaggatgt cctccggcag gaccgcgcgc caggccacat
     2161 aaccggcata gagcggcgcg acggcgggca ggcaaagctg gcgcacggtc gagcgcaacc
     2221 catcggcgcc gatcagcgtg tcgccctcgg cgacgctgcc gtcgccgaag tgagcgacga
     2281 cgccgcgacg gtcctgcgtg aaggccgtaa agctgcggcc gcgctggtag caaggcgccg
     2341 gcaacgcttc gcggagcacg cgatagatgt gctcccaggc tgccatcagg tgcgggcgtt
     2401 cgatcgcagc caccaccccg cccgcggcat cgagcatctt acgggcgttg agcaccacgc
     2461 cgaggtcgcg cacctcaagg cccagggcgc cgaggtgagc gatgagttcg gcttgggcga
     2521 ggatgccggc gccgcggccg gccaattcag tctcgacgcg ctcgaacaca tcgacgtccc
     2581 aaccgcgtcg ctgcagcatg agcgctgcca ggagtccgct catcgagccg ccgatgatga
     2641 gcgcgcgccg tcgtttgctc gttctgcgct cggtgccgcg cgcgcgcgcg gccgggggcg
     2701 cccggcgctg ctttttaccg tccagggtcg cggtcttggc cgggacgcgc gcagtaccac
     2761 gcggcatgca acaccttgct atttcacgga gtgcgaagct tctatagtct gaacggcaac
     2821 cccgggggaa acgccatggc cctgccgctg gacaaggcgg gcgatcacga atgatctttt
     2881 cattcgatct tctggtcaac gccgtcgtct ccggcatcct gatcggcggc ttctacgcgg
     2941 cggtcacggc cggcgtatcg ctgtcgttcg gcgttctcga cattgtcaac atcgcccacc
     3001 cggccttcat cattctcggc tcctacaccg cctatcttgt caataccacg ctcggcgttg
     3061 acccgattct caccagcatc gtcttggctc cggcgttcta cgcgctcggc gccgccatct
     3121 accagatcta ctatgtctcg ttcgaaaagc gcggccagga atcgctgcgc ggcctcgcct
     3181 tcttcttcgg cctcctgttc atcaccgagg tgagcctggt cctctatttc ggtgtcgact
     3241 accgttacgt cgaagcgtcg tatatcggtc cgacctggca tttcggcttc atcgacgtgc
     3301 cgctgcgcat cgtggtgccg ttcctggtgt cgctgttgct gatcgcgacg ctgcagctcg
     3361 tgcttacgcg cagcttcgtc ggccgcgcca tcatggcggt ggcacaggac cagcttgcgc
     3421 tcaggctctt ggcagtcgac ccgatccgca tcaaacgcat cgccttcggc atttcgatcg
     3481 cgaccgcatc gctggccggc gcgttcctca tcatcatcca gccggtcgag ccgtcggtcg
     3541 gacgcgaata tatcggccgc gtgttcgcga tctgc
//
LOCUS       DATMQB010000150        11554 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3461885, whole genome shotgun sequence.
ACCESSION   DATMQB010000150 DATMQB010000000
VERSION     DATMQB010000150.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11554)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11554)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11554
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3461885"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..886)
                     /locus_tag="VNY79_04745"
     CDS             complement(<1..886)
                     /locus_tag="VNY79_04745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HWX71784.1"
                     /translation="MAAPPTPPSPLIFDRGLLRARHRRAASLGPTTFLLDRVADDITD
                     RLATVKRRFDLALDLGTPGEVVRAALARVGSVGTIVAAAAFPAGGAGRVTPFVIADEE
                     ALPFGDATLDLVVSTLALQFVNDLPGTLVQIRRALKPDGLLLAALLGGETLAELRESF
                     AAAESETTGGVSPRVAPFADLRDLGALLQRAGFALPVTDTDRLTVRYDSAFALMRDLR
                     RMGATNILVDRRRRPLRRATLMRMAEIYAERFADPDGRLRATFEIVWLSGWSPHPSQR
                     QPLKPGSAAARLADALGTQ"
     gene            973..1773
                     /locus_tag="VNY79_04750"
     CDS             973..1773
                     /locus_tag="VNY79_04750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HWX71785.1"
                     /translation="MGDAAGEIPAPVSTARLASAADKVRALRAALDIALPRLCAVCRE
                     PVEGEGLCASCWSKRSFITRPYCERLGIPFVYDPGPGILSMEAIADPPAYNRARAAVR
                     FDEISRVLVHALKYGDRLDLAPMMGRWISRAGREVLAEADALVPVPLHWRRLWTRRFN
                     QSAMLAAAVSAASGVPMVTDALKRVKATVQQVGLSRSERAANVQGAFRVPEQGKAAVV
                     GRRLIVLDDVLTSGVTVEGCARALLRAGAGNVDVLVFAGVADPVRMSI"
     gene            1800..2075
                     /gene="grxC"
                     /locus_tag="VNY79_04755"
     CDS             1800..2075
                     /gene="grxC"
                     /locus_tag="VNY79_04755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin 3"
                     /protein_id="HWX71786.1"
                     /translation="MISVEIYTQRYCSYCHWAKELLTRKGVSFHEIDVTADRQMRQHM
                     IERANGQGTVPQIFIGSTHVGGCDELYALEEAGQLDPLLGAGEGQPE"
     gene            2072..2956
                     /locus_tag="VNY79_04760"
     CDS             2072..2956
                     /locus_tag="VNY79_04760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HWX71787.1"
                     /translation="MSAATPAAFKVGLVQMRSGVDPHANLAAALAAIEEAKRAGADYV
                     LTPEVTNIIESNRERLFAAIADEEHDPVLAALRDAARRLGIYVHIGSLSVRASPDKAA
                     NRSFLIDRAGDVVARYDKIHMFDVDLADGDSRRESRTYRPGELAIVADLPWGRLGVTI
                     CYDLRFPALYRALAEAGASFFSIPSAFTRPTGQAHWHVLMRARAIENGCFVFAAAQGG
                     KHESGRETFGHSLIVDPWGRILAEGGTEPGIILAEVDPAQVAAARSQIPSLHNGRRFE
                     VIEPMAEPTHLRAVRGPA"
     gene            2953..3468
                     /locus_tag="VNY79_04765"
     CDS             2953..3468
                     /locus_tag="VNY79_04765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1178 family protein"
                     /protein_id="HWX71788.1"
                     /translation="MIRYALNCEHGHAFESWFQNSAAYDKQAKRALVTCPVCGSAKVE
                     KAIMAPRLARTEPGEPVEARPVPPLPMPANLPAPTLPLPPSALGKTPVAIMSPQEREL
                     RKKLKELREHITRNADYVGPGFPEQARKIHYGEIEHRSIYGEASPDEAKALHEEGIEF
                     HPLPILPDEFN"
     gene            complement(3473..4324)
                     /locus_tag="VNY79_04770"
     CDS             complement(3473..4324)
                     /locus_tag="VNY79_04770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HWX71789.1"
                     /translation="MTLPKRDWMEMTWADIAAAGEAVRRWIAVLPFAAVEQHGPHLPL
                     GVDAYIAEAYLARVRKILPETLPVTFLPVQRVGVSAEHLGYPGTLTLSAATAIKAWTE
                     IGESLARAGLRKLLLVTSHGGNVAAMELAARDLRTRLGMLAVTVGWHRFGYPEGTFSG
                     EERRHGIHGGDIETSLMLAAMPDTVRTEKAAQATPATIAMAREFKWLGAYRPAGFAWM
                     TQDLNATGAVGDATQASAAKGEAALAHGAQAFVELLGEMERFDLARLREGPLSDSAYD
                     LSPGINR"
     gene            4462..5421
                     /locus_tag="VNY79_04775"
     CDS             4462..5421
                     /locus_tag="VNY79_04775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX71790.1"
                     /translation="MTPASAQALDKVSFGTNWVAEAEHGGFYQALADGTYKKYGLDVT
                     IVPGGPNANNRILLPVGKIDFYMSANTLQAFDAVEQNVPTIEVASMFQKDPQVLIAHP
                     DQNIKKLIDLKRLTLFISKEGVATYFQWLKADFGFKEEQVKPYTFNPQPFLADKKSAM
                     QGYVTSEPFAIEKQGNFKPKIFLLANEGFSSYSTLIETRRELVEKKPDLVQRFVDASI
                     IGWYKYIYGDNKAANAIIKRENPEMSDDLLAYSVAKMKEYGIVDSGDSLSLGVGAMTD
                     ARMQDFFDKMVRAGVVKAGLDYRKSYTLKFVDKKVGLDLRPKQ"
     gene            5430..6227
                     /locus_tag="VNY79_04780"
     CDS             5430..6227
                     /locus_tag="VNY79_04780"
                     /EC_number="7.6.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX71791.1"
                     /translation="MPPTGNPRAAPLVALRGVGKTFPTGTRALARLELELRAGEFLAL
                     LGPSGCGKSTALRIIAGLSEPTEGAVEWPAADAAPPAGNGSRIGFVFQEPTLMPWANV
                     FNNVLLPLNLHNAPARQAAERVEAVLGRVGLLPFGRAYPRELSGGMRMRVSIARALVT
                     EPELLLMDEPFAALDEITRFKLNDDLLQMWQALQTTVVFVTHSVFESVYLASRVVVMA
                     ARPGRVFSELAIDAPYPRDRNFRTSSEYAAFCREASAALAQAMAAGA"
     gene            6284..7099
                     /locus_tag="VNY79_04785"
     CDS             6284..7099
                     /locus_tag="VNY79_04785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018700911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX71792.1"
                     /translation="MPPALPRARAGDRDGVLRIALPIIVLALGLAIWELVVRIKNIPP
                     YVLPSPSLVLQTLAADWALLSRSLLVTLITTFEGFLLAAAGGVGLAVLFNQSRLVEYS
                     LYPYAVILQVTPIVAVAPLLLIYLPQRAAVLACAWIVAFFPVLANTTLGLNSVDRNLA
                     DLFALYHASRAQVLWRLKLPSALPYILGGLRIAGGLSLIGAVVAEIAAGSAGAGSGLA
                     YRIAESGYRLNIPRMFAALLLLSFAGIVIFYLLSLINHLALRRWHESALQGER"
     gene            7297..8505
                     /locus_tag="VNY79_04790"
     CDS             7297..8505
                     /locus_tag="VNY79_04790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013949473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class V-fold PLP-dependent
                     enzyme"
                     /protein_id="HWX71793.1"
                     /translation="MPQNASRLTGRHFLQIPGPTPMPDRIMRAMDMPLVDQRGPEFAK
                     LGKRVLEGIKTIFKTAQPVIIYTATGTGAWEAALTNTLSPGDRVLMVETGQFATLWKI
                     MAERLGLKPEFISTDWRVGADPKIIEEHLRQDKAHAIKAVCVLHNETATGCLSPIDQI
                     RKAIDAAGHPALLLVDTISSLASTDYRHDEWGVDVTIGGAQKGLMLPPGMSFNAVSEK
                     AARASKNAKLPRSFFQWDDMLTMYKQGFFPYTPATQMLYGLDTAIEMLHEEGLDNVFA
                     RHHRLAEATRRAVRAWGLEILCREAKYYSPTITAVLLPDGHDADQFRDLALNTFNIAY
                     GASFGPYVKKYFRIGHLGDINDATLIGALGATEMSLALAGIPHKKGGVQAAMDYIVST
                     QSRPARAAAE"
     gene            8960..9931
                     /locus_tag="VNY79_04795"
     CDS             8960..9931
                     /locus_tag="VNY79_04795"
                     /inference="COORDINATES: protein motif:HMM:NF012798.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HWX71794.1"
                     /translation="MFTAKLEGRDPAAEKRERKRRLVADRVEDLLEIFVEQRLSQNRS
                     GAEIGRLLRREIGKTWAGRSIYEIAKRDVVEVVSAIEQRGASIAANKALKSIKMFLRW
                     CVGRAILDQSPAEGVPTPTKEVARDRVLSDEELASVILGARQIDERYGGIVELLALTG
                     QRREEVARLAWEELDFGRRIWTIPKERTKNAKPHVVHLSDEAIAVLERRQKHGAHVFA
                     FPRGKSFQQFSVAKRKLDEVSGVTGWRLHDLRRTCVSGMARLGVAPHVADKVLNHQSG
                     TISGVAAVYQRHEFLRERKDALEQWGAHVGKTVTKIFDELRKAKEAA"
     gene            9939..10688
                     /locus_tag="VNY79_04800"
     CDS             9939..10688
                     /locus_tag="VNY79_04800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71795.1"
                     /translation="MSRFPTSGSFLMTPSSEAIPDCFFSISEAVSVLARGMWGGLQRP
                     DPVGQFKKQFGNVSVGFGPWKEEAARRFRTAAIEGNVQVYVYCEKSGSASHVETKPVS
                     LSIEVLARLIAPRGGLPDHAVRPSLKIAGGDTKLLALLARGILLVSKKDFDNWYRSQR
                     SKRRWASQRLTKRRRGGRPSVQTEALRSAIFSILLGNKLSIAELRRRLVGAGQIGVPS
                     SDTLERLVDQLHRETGEKNLRRIKRLRRKRV"
BASE COUNT         2087 a         3698 c         3720 g         2049 t
ORIGIN      
        1 cctgcgtgcc gagcgcatcc gcgaggcgcg cggccgcgga gcccggcttg agcggctgcc
       61 gctggctcgg atgcggcgac cagccggaca gccacacgat ctcgaaggtg gcgcgcagcc
      121 gcccgtcagg atcggcgaag cgttcggcat agatttccgc catgcgcatc agcgtcgcgc
      181 ggcggagcgg ccgccgccgg cggtcgacga gaatgttggt tgcacccatg cgccgcaggt
      241 cgcgcatcag tgcgaacgct gagtcgtagc gcacggtgag ccggtcggtg tcggtcaccg
      301 gcagggcaaa tccggcgcgc tgcaacaagg cgccgagatc gcgcagatcg gcgaagggcg
      361 ccacgcgggg cgagaccccg cccgtcgttt cgctctccgc cgcggcgaag gattcgcgca
      421 actccgccag tgtctcgccg cccaggaggg cggcgaggag cagtccgtcg ggcttcagcg
      481 cgcggcggat ttgcacgagc gtacccggca ggtcgttgac gaactgcagc gccagcgtgg
      541 aaacgacgag gtcgagcgtg gcgtcgccga agggcagggc ttcctcgtcg gcgatgacga
      601 atggggtgac gcggcccgcg ccgcccgcgg gaaatgccgc cgccgccacg atcgttccga
      661 ccgacccgac gcgagcgagc gccgcccgta ccacttcgcc gggcgtgccg aggtcgagcg
      721 cgagatcgaa ccgccgcttc accgtggcca gccggtcggt gatgtcgtcg gcgacgcgat
      781 cgagcaggaa tgtcgtcggc cccaaggacg ccgcgcgccg gtgccgcgcg cgcaacagcc
      841 cgcgatcgaa gatcagcggg ctcggcggtg tgggcggtgc ggccatgact tccagactgg
      901 caagtgccgc ggcgagcggc ggatcaacgc gaagccgatg acaattcccg cgcgcagagg
      961 tagcgtggcg ttatggggga tgcggcgggg gaaattccgg cgcctgtttc cacggcccgg
     1021 ctggcaagcg ccgcggacaa ggtccgcgcg ctgcgcgcag ccctcgatat cgctttgccg
     1081 cgcctgtgcg cggtctgccg cgagccggtg gaaggcgagg ggctctgtgc gtcctgctgg
     1141 tcgaagcgtt ccttcatcac ccgaccctat tgcgagcggc ttggcattcc cttcgtctat
     1201 gaccccggcc ccggcatcct gtccatggaa gccatcgctg atccgccggc ctacaaccgc
     1261 gcccgcgccg cggtgcgctt cgacgagata tcgcgcgtcc tggtgcatgc cctcaaatat
     1321 ggggaccggc tcgacctcgc gccgatgatg ggccgctgga tcagccgcgc cgggcgtgaa
     1381 gtcctcgccg aagccgacgc gctcgttccg gttccgctgc actggcggcg gctgtggacg
     1441 cggcgcttca accagtccgc catgctggcg gctgccgtgt ccgcggcaag cggcgttccg
     1501 atggtgacgg atgcgctcaa gcgcgtgaag gcgaccgtgc agcaggtcgg gctgtcacga
     1561 tccgagcgcg ccgccaacgt ccagggcgcc ttccgcgtgc cggaacaggg caaggcggcg
     1621 gtcgtcggcc gccggctcat cgtcctcgac gacgtgctca cgtccggcgt tactgtcgag
     1681 ggctgcgccc gggcgctgtt gcgcgcgggg gccggcaacg tcgacgtgct cgttttcgcc
     1741 ggggttgccg atccggtgcg gatgtccata taaccgattg atacaactaa tggatcgtta
     1801 tgatttcggt cgaaatctat acccagcgat attgctccta ctgccactgg gcgaaggaac
     1861 tgctgacgcg caaaggcgta agcttccatg agatcgacgt cacggcagac cggcagatgc
     1921 ggcagcacat gatcgagcgc gccaacggac agggcacggt tcctcaaatc ttcatcggct
     1981 caacccatgt cgggggctgc gacgaactct atgcgctcga ggaggcgggc cagctcgatc
     2041 cgctgctggg ggcgggcgag ggccagccgg aatgagcgcg gcaactcctg cggccttcaa
     2101 ggtcggtctc gtgcagatgc gctcgggggt cgatccgcat gccaatctcg ccgcggccct
     2161 ggcggcgatc gaagaggcca agcgggccgg cgccgactac gtccttacac cggaagtgac
     2221 caacatcata gagagcaacc gcgagcggct ctttgccgcg atcgcggatg aggagcacga
     2281 cccggtgctc gccgccctgc gcgacgcggc gcgcaggctt ggcatctacg tccacatcgg
     2341 atcgctgtcg gtcagggcgt cgcccgacaa ggcggccaac cgctcattcc tgatcgaccg
     2401 cgccggcgac gtcgtggccc gctacgacaa gatccacatg ttcgacgtcg atctcgccga
     2461 tggcgacagc cgccgcgaat cgcgcaccta ccggccgggg gagctcgcca tcgtcgccga
     2521 cttgccctgg ggccggctcg gcgtgaccat ctgctatgat ctgcgctttc cggcgctcta
     2581 tcgcgcgctt gccgaggcgg gcgcgtcgtt cttctcgatt ccctccgcct tcacccggcc
     2641 gaccggccag gcgcattggc atgtgctgat gcgcgcccgc gccatcgaga acggctgctt
     2701 cgtgttcgcc gccgcgcagg gcggcaagca cgagagcggg cgcgagacgt tcggccattc
     2761 gctcattgtc gacccctggg gtcgcatcct cgccgagggc ggaaccgagc ccgggattat
     2821 tcttgccgag gtcgatccgg cgcaggtcgc cgctgcgcgc tcccagattc cttcgctcca
     2881 caacggccgg cgcttcgagg tgatcgagcc gatggccgag ccgacccatc tgcgcgctgt
     2941 gcgggggccg gcatgatccg ctacgcgctc aattgcgagc acggccacgc cttcgagagc
     3001 tggttccaga actcagccgc ctacgacaag caggccaagc gcgcgctggt gacttgcccg
     3061 gtctgcggct ctgccaaggt cgagaaggcg atcatggcgc cgcggcttgc ccgcaccgaa
     3121 cccggggagc cggtcgaggc gcgcccggtg ccgccgctcc cgatgccggc gaacttgccg
     3181 gcgccgacgc taccgctgcc gccgtccgca ctcggcaaga cgccggtcgc gatcatgtcc
     3241 ccgcaggaac gcgagctgcg caagaagctc aaggagttgc gcgagcacat caccaggaac
     3301 gcagattatg tgggccccgg tttcccggag caggcgcgca agatccacta cggcgagatc
     3361 gagcaccgct ccatttatgg agaagcctcg ccggacgagg ccaaggcgct gcacgaggaa
     3421 ggcatcgaat tccacccgct gccgatcctg cccgacgaat tcaattgatc gattagcgat
     3481 tgatccccgg tgacaggtcg taggccgagt cactgagcgg cccttcgcgc agccgggcga
     3541 ggtcgaagcg ctccatctcg cccagcaatt cgacgaaagc ctgcgctccg tgggcgagcg
     3601 ctgcctcgcc cttcgcggcg ctggcctgcg tcgcgtcgcc gaccgcgccg gtagcgttga
     3661 gatcttgcgt catccaggca aagcccgccg gacgataggc gccgagccat ttgaactcgc
     3721 gcgccatcgc gatggtagcg ggcgtcgcct gcgccgcctt ctccgtgcgt accgtgtccg
     3781 gcatcgcggc gagcatgagc gaggtctcga tgtcgccgcc gtgaatgccg tgtcttcgtt
     3841 cttcgcccga gaacgtgccc tccggatagc cgaagcggtg ccagccgacg gtgacggcga
     3901 gcatgccgag ccgggtgcgc aaatcgcgcg ccgccaattc catggccgcg acgttgccgc
     3961 catggctggt gacgaggagg agcttgcgca gcccggcccg cgcaaggctc tcgccgatct
     4021 cggtccaggc cttgatcgca gtcgcggccg acagcgtcag tgtgccggga tagcccaggt
     4081 gctcggctga gacgccgaca cgctgtaccg gcaaaaacgt gaccggaagc gtctcgggaa
     4141 ggattttgcg cacgcgcgcc agataggcct cggcaatgta agcatcgacg ccgagcggca
     4201 ggtgcggtcc gtgctgctcc accgcggcga acggcagcac cgcgatccag cgccggaccg
     4261 cttcgcccgc cgcggcgatg tcggcccagg tcatctccat ccagtcgcgt ttgggcagcg
     4321 tcatgaggct ctcttaggtc tctcgccaag cgtgctgggc tctcctattg tcgcggtccc
     4381 aatgcgaagg agcaaccgat gtcgcgcgca agcatgtcgt ggatagtgct cgccggatgg
     4441 accgcccttg tggccgcccc gatgacccca gcgtccgctc aggcgttgga caaggtctcg
     4501 ttcggcacca actgggtggc ggaggccgag cacggcggct tctaccaggc gctcgccgac
     4561 ggcacctaca agaagtatgg cctcgacgtg accatcgtgc cgggcggccc caacgccaac
     4621 aaccgcatcc tgctcccggt cggcaagatc gacttctaca tgagcgccaa cacgctgcag
     4681 gccttcgacg cggtcgagca gaacgtgccg acgatcgagg tcgcctccat gttccagaag
     4741 gacccgcagg tcctcatcgc ccaccccgac cagaacatca aaaagttgat cgacctgaaa
     4801 cggctgacgc tgttcatctc caaggaaggg gtggcaacct acttccagtg gctcaaggcc
     4861 gacttcggct tcaaggaaga gcaggtcaag ccctacacct tcaacccgca acccttcctc
     4921 gccgacaaga agagcgcgat gcagggctac gtgacgtcgg agccgttcgc catcgagaag
     4981 cagggaaact tcaagccgaa aatcttcctg ctcgccaatg aagggttcag ctcctattcg
     5041 acgctgatcg agacccgccg cgaactcgtg gaaaagaagc ccgacctggt gcagcgcttc
     5101 gtcgatgcct cgatcatcgg ctggtacaag tacatctacg gcgacaacaa ggcggccaac
     5161 gcgatcatca agcgcgagaa cccggagatg tccgacgatc tcctcgccta ttccgtcgcc
     5221 aagatgaagg agtacggcat cgtcgattcg ggcgattcgc tctcgctcgg agtcggcgcc
     5281 atgaccgacg cgcgcatgca ggatttcttc gacaagatgg ttcgcgccgg cgtcgtcaaa
     5341 gcgggtctcg attaccgcaa atcctacacg ctgaaattcg tcgacaagaa ggtcgggctc
     5401 gatttgcggc cgaagcaata gcgccgccga tgccgccgac gggtaacccg cgtgccgcgc
     5461 ctctcgtagc gctgcgcggt gtcggcaaga catttcccac cggcacgcgc gcgctcgcaa
     5521 ggctcgagct cgagcttcgc gccggcgagt ttctggcgct gctcggtccg tcgggctgcg
     5581 gcaagtcgac ggcgctgcgc atcatcgccg gattgagcga gccgaccgag ggcgcggttg
     5641 aatggccggc ggcagacgct gcgcctccgg ccgggaacgg gagccggatc ggcttcgtgt
     5701 tccaggagcc gacgctgatg ccgtgggcca acgtcttcaa caacgtgctg ctgccgctca
     5761 atctccataa cgcgcccgcg cgacaggcgg cggagcgcgt cgaggcggtg ctcggccgcg
     5821 tcgggctgct gccgttcggc cgcgcctatc cgcgcgaatt gtccggcggc atgcgcatgc
     5881 gcgtctcgat cgcgcgcgcc cttgtcaccg agccggagct cctcctgatg gacgagccgt
     5941 tcgccgcgct cgacgagatc acccgcttca agctcaacga cgatctgctg cagatgtggc
     6001 aggcgttgca gaccacggtg gtgttcgtca cccattcggt gttcgagtcg gtctatctcg
     6061 cgagccgcgt cgtggtgatg gcggcgcggc cgggccgcgt cttcagcgag ctcgcgatcg
     6121 acgcgcccta tccgcgcgac cggaatttcc gcacctcgtc cgagtacgcc gctttctgcc
     6181 gcgaagcgtc ggcggcgctc gcacaagcca tggcggcggg agcttagccg tgaagaacgc
     6241 gacgcgcttt tccgctgcca ccggcgccgg cgagcaaaag gccgtgcctc cggcgctgcc
     6301 gcgggctcgc gcgggagacc gcgacggcgt gctccgcatc gcgctgccga tcatcgtgct
     6361 ggcgctcggg cttgccatat gggagctggt ggtgcggata aaaaatattc cgccctacgt
     6421 gctgccgtcg cccagtctcg tgctgcaaac cttggccgcc gactgggcgc tgctgtcgcg
     6481 gtcgctcctg gtcacgctca tcaccacgtt cgagggcttc ctgctcgcgg cggccggcgg
     6541 ggtcgggctc gcagtcctgt tcaaccagtc gcggctcgtc gaatattcgc tctaccccta
     6601 cgccgtcatc ctccaggtga cgccgatcgt tgcggtggcg ccgctgttgt tgatctacct
     6661 cccgcagcgg gcggcggtgc tcgcctgcgc ctggatcgtg gccttctttc ccgtcctcgc
     6721 gaacaccacg ctcgggctga actcggtcga ccgcaacctc gccgacctgt ttgcgctcta
     6781 tcacgcctcg cgggcgcaag tgctgtggcg cctcaagctg ccgtccgcgc tcccttacat
     6841 cctcggcggg ctgcgcatcg ccggcgggct gtcgctgatc ggcgctgtgg tcgccgagat
     6901 tgccgccggc tcggccggcg ccggctcggg cctcgcctac cgcatcgccg aatcaggcta
     6961 ccggctcaac attccgcgca tgttcgcggc cctgctgctg ctctcgttcg ccggcatcgt
     7021 cattttctat ctgctctcgc tgatcaacca cctggcgctg cgccgctggc acgagagcgc
     7081 gctgcagggc gagcgatgac gcggcgggcg cagcgcgggc ggcgtcgggc gcctcggccg
     7141 caacgtggta aacggccgct tgcgccgcga cggctgggcc gcgaccgcga agaggcttga
     7201 cccgcctggt gcattcgggg atcaaggccg ccggccgcag caccttcgga caggcgcggc
     7261 agggatagga cgaaggcgtc cgaaggagtg ccgacaatgc cgcagaatgc ttcgcgcctg
     7321 accgggcgcc atttcctgca gattcccggg ccgacgccca tgcccgaccg catcatgcgg
     7381 gcgatggaca tgccgctcgt cgaccagcgc ggcccggaat tcgcgaagct cggcaaacgg
     7441 gtactcgaag gcatcaagac cattttcaag accgcccagc cggtcatcat ctacaccgcg
     7501 accggcaccg gcgcgtggga ggccgcgctc accaacacgc tctcgcccgg cgaccgtgtg
     7561 ctgatggtcg aaacgggcca attcgccacg ctgtggaaga tcatggcgga gcgactggga
     7621 ttgaagcccg aattcatcag caccgactgg cgcgtcggcg ccgatccgaa gatcatcgag
     7681 gagcatctgc gccaggacaa ggcgcatgcg atcaaagcgg tctgcgtcct gcacaacgag
     7741 accgcgaccg gctgcctgtc gccgatcgat caaattcgca aggcgatcga tgcagccggc
     7801 catccggcgc tgttgctggt cgatacgatc tcctcgctcg cctcgaccga ctaccggcac
     7861 gacgaatggg gcgtcgacgt caccatcggc ggagcgcaga agggcctgat gctgccgccc
     7921 ggcatgtcgt tcaacgcggt gagcgagaag gcggcgcggg cgtcgaagaa cgcgaagctg
     7981 ccgcggtcgt tctttcagtg ggacgacatg ctgacgatgt acaagcaggg cttctttccc
     8041 tacacgccgg cgacgcagat gctctacggc ctcgatacgg cgatcgagat gctgcacgag
     8101 gaaggcctcg acaacgtctt cgcccgccat caccggcttg ccgaggcaac gcgccgggcg
     8161 gtgcgcgcgt gggggctcga aatcctctgc cgcgaggcga agtactattc gccgacgatc
     8221 accgcggtgc tgctgcccga cggccacgac gccgatcaat tccgcgatct cgcgctcaat
     8281 accttcaaca tcgcctacgg cgcgagcttc ggtccctacg tcaagaaata cttccgcatc
     8341 ggccatctcg gcgacatcaa cgacgccacg ctcatcggcg cgctgggggc gaccgaaatg
     8401 tcgctcgcgc tggccggaat ccctcacaag aaaggcggcg tgcaggcggc aatggactac
     8461 atcgtgtcga ctcaatcgcg cccggcccgc gccgccgcgg agtgatactg accatcacta
     8521 ttcggcagca ctgacgcacg ctgccctctc ccgcagggtt ctcgaaagag tctttcccgc
     8581 tgatggattg tggttgcctg ctgttcataa cttactgaat ttgcttgcat caactcggac
     8641 taagtatcac ctaggttccc ggcgttccat ttcaaccgct acctatgtga ggacaaggta
     8701 gcatcggccc gggggcctat cttgcatgcc gcgcgcaaag ctgaccaagg gtgtcatcga
     8761 ctcacttcct atacctcagt ccgatatcgt ctattgggac gccgcacttc ccgggttcgg
     8821 agtcaaagtg acgccgaaag gccgcaaggt gttccttgtc ttgtatcgca cgggcggcgc
     8881 cggctcaaag ctgcggaagt acaccatcgg tccgtattga cgcgtgaccc tacaccaggc
     8941 ccgtgctgca gctcagaagg tgttcaccgc caagctggaa ggacgcgatc cggctgctga
     9001 aaagcgggaa aggaagcggc ggcttgtagc agatcgcgtc gaggatctgc tggagatttt
     9061 tgtcgagcag cgcctctccc agaaccgatc tggggcggag attgggcggc tgcttcgccg
     9121 ggagattgga aagacctggg ccggcagaag catctatgag attgctaaac gagatgtcgt
     9181 agaagtggtt tccgcgattg agcagcgcgg ggcctccatt gccgccaaca aagccctgaa
     9241 atcgatcaag atgtttttgc gctggtgcgt gggtcgagct atcctcgatc aatccccagc
     9301 cgaaggcgtg ccaacaccga ctaaggaagt cgcccgcgac cgggtgctga gcgatgagga
     9361 acttgcgagt gttattctag gggcgaggca gatcgatgag cgctatggcg gcattgtaga
     9421 gctgctagcg ctaaccgggc agcgccgcga ggaggtggca aggctcgcct gggaggaact
     9481 ggactttggc cggcggattt ggacgattcc caaagaacgt acaaagaatg ctaagcccca
     9541 cgttgtgcac ttgtccgacg aagcaatagc agtcctggaa cggaggcaga agcacggagc
     9601 tcacgtattt gcttttccca ggggcaaatc cttccaacag ttttcggttg ccaaacgcaa
     9661 actggacgaa gtgtccggag tgaccggatg gcgccttcac gatctacgac gcacctgcgt
     9721 gtcagggatg gcccgcctcg gcgttgctcc gcatgttgct gacaaggtgc tcaatcacca
     9781 atccggtaca atttcaggtg ttgctgccgt ctatcaacgg cacgaatttc ttcgtgagcg
     9841 taaggatgcg cttgaacagt ggggtgctca cgtcggtaag actgtgacga agattttcga
     9901 cgagcttcga aaagctaaag aagctgcata aaattcacat gtcgcgtttc ccgacttccg
     9961 gttcattctt gatgacccca tcgagtgaag ccattccgga ttgttttttt agcatttcag
    10021 aagcggtttc tgtgttggcc cgcggcatgt ggggaggctt gcagcggcct gatccagtag
    10081 ggcagttcaa gaagcagttt gggaatgtgt ccgtaggctt tggtccgtgg aaagaagagg
    10141 ccgcgcgtcg cttcagaacc gcagcgatcg aaggaaacgt ccaagtctat gtgtattgcg
    10201 aaaagagtgg gtcggcgagc catgtcgaga cgaaacctgt atcgttatca atagaagttc
    10261 ttgcgcggtt gattgcgcca cgcggaggcc ttccagatca tgctgttcga ccatcgctga
    10321 agatcgcagg aggtgacact aaattgctgg ctttgctagc cagaggaatt cttttggttt
    10381 cgaaaaaaga ctttgataac tggtaccgct cgcagcgttc caagcgcaga tgggcctcac
    10441 aacgtttaac gaagaggcgc cgcggcggaa gaccttcagt acagaccgaa gcattgcgca
    10501 gtgctatttt cagtatcttg ctgggaaaca agctcagcat tgccgagctt cgtcgtcgtc
    10561 tagtgggcgc cggccagata ggcgttccga gcagcgacac tcttgagcga ttagtggatc
    10621 agctgcatcg cgagacgggt gaaaagaatc tccgcagaat caagcgcttg cgacgtaagc
    10681 gcgtctgagg ggttctgctt accgcaaaac cctcgtggag atttgcgaat tctcgggttc
    10741 ttacgcgccc ttaagctatt gaattggccc catttttcta ctttgtttcg tgccgaatgc
    10801 tcatcgaagc attttggggg aggtccgcag ggacgggcac ggcgccatca tcgccgagga
    10861 tgaagcgtaa ggtttcgcca atccagtaac gggtaagagg aggatgaagg gcatgaacgc
    10921 ctcaatgaag gcgagcccga tcgaacctct gctgcaccct cgagaggccg cgacgattct
    10981 taatgtctcc ttgtcttggc tcgccaagtc gcggctttcg ggagaggggc ctcggttcgt
    11041 gaaaatcggc cgagcagtcc ggtatctcga gtccagcttg cgagagttca tcaaaggccg
    11101 gacccgaggg tcgaccagcg aagagtgacc gatcgagcgt cgcaaaaggg cgcgagagtc
    11161 cggcaaggac tttccgccct ttccatttaa aagagggaat gatggtctat cactatacct
    11221 gacaatacat gcgcaggaac tagtatatcg cgagtttaga aacaaacatg agagtatatg
    11281 cgcgcaataa taagatagcg tattcctaaa tagccaccac atctacttgg gtacattccc
    11341 atcaaccagg aggaaggagg acttgatcct aatgagtgaa aatgtcgtgc tgatcgaaaa
    11401 gtcctttgcg gacgcgatcg cgatgatcgc cgctgcggag gagttgccgg aggaaaagcg
    11461 ccggcactgg gcgacatcgt tgcgccaagt cgccaaggct ctggaccgcc ctttggaagt
    11521 gattcccgcc cgctacagcg cggttcgcgc cgac
//
LOCUS       DATMQB010000151         4430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_48266, whole genome shotgun sequence.
ACCESSION   DATMQB010000151 DATMQB010000000
VERSION     DATMQB010000151.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4430
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_48266"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..459
                     /gene="rfaE2"
                     /locus_tag="VNY79_04805"
     CDS             <1..459
                     /gene="rfaE2"
                     /locus_tag="VNY79_04805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009244 - lipopolysaccharide core region
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycero-beta-D-manno-heptose 1-phosphate
                     adenylyltransferase"
                     /protein_id="HWX71796.1"
                     /translation="DERLAEWRRRGLRIGFTNGCFDLLHRGHIRLLAEARAACDRLVV
                     GLNSDASTRRLKGNARPINPVEARADVLAALEAVDLVVVFEENTPLELIRRVQPAVLV
                     KGGDYKPEEVVGREVVEAAGGSLILVDPVPGHSTTAIVKRAQPVKEPAGE"
     gene            468..2072
                     /locus_tag="VNY79_04810"
     CDS             468..2072
                     /locus_tag="VNY79_04810"
                     /inference="COORDINATES: protein motif:HMM:NF016908.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FkbM family methyltransferase"
                     /protein_id="HWX71797.1"
                     /translation="MRTVFPDSVEDELKAEFFGRSPAGFFVEVGANEPRHGSQTWQFE
                     QAGWNGVLVEPQPELAERLRAGRRARIVAAACSSPANAGGKMTLFLSGPHSSLKRDLV
                     VTGVAPHGTIEVPARTLDDILVETGAPTPIDFISIDVEGHEVDVLSGFDVARWRPRLI
                     LIEDHVSSLATHRFLMRAGYQLIRRTGLNGWYVPRSEAPRVGLGWWQLARKYYLALPF
                     RVLRDRKRRWRDRLRQRLGLGAWRRHSPLARAQLMSIIMTTYNRDDALEAALRALSRQ
                     SDRNFEIIVAEDGSRPETARVVERWAPRLPVPLKHARQEHDGFRGGEIRNRGIRASAG
                     TYCIFLDGDCLPRPDFVATHRALAQPGWFVTGNRILLSREFTAAVLADGTAVETWSLG
                     ALMRERLRGGVNRLLPALRLPLGPLRNLPRGWKGVQSCNLAIAREDLYRIDGFDAAYT
                     GWGREDSDLVVRLQHAGVRRKDGRFATGVLHLWHVQNDRSQLPANEARLDAAIRSDRV
                     RALRGLSFLGDDVETREPATLLRQGG"
     gene            2189..3292
                     /gene="wecB"
                     /locus_tag="VNY79_04815"
     CDS             2189..3292
                     /gene="wecB"
                     /locus_tag="VNY79_04815"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020665357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008761 - UDP-N-acetylglucosamine
                     2-epimerase activity [Evidence IEA];
                     GO_process: GO:0009103 - lipopolysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HWX71798.1"
                     /translation="MRFLCVVGTRPEAIKLAPVILELARHSHVTTMCSGQHGKLAQEP
                     LAWFGIRPDDQITVGSRSKTLATRTGAMLAPMERMITKHRPDIVIAQGDTTTVLVSAL
                     TAFYLGVPFAHVEAGLRTGNLQAPFPEEFNRVAADRLARWYFCPTRGAVAHLRAERVD
                     ASRIFLTGNTGIDALRLALERLAPAPETDGRRRQILLTAHRRENQGRRMEAICQAVIA
                     LVKEFDDVEFTIPVHPSPAVRSTFEALRVAHDRVRLLPPLTYERLVLEMARSHLILTD
                     SGGIQEEAPFLKKPVLVLRDVTERPEAIELGAARLIGTETAAIVGAVRELLTDEAAYA
                     KMAAGGSPYGDGYAAERIAAAFGLCQRPVSAVG"
     gene            3332..4093
                     /locus_tag="VNY79_04820"
     CDS             3332..4093
                     /locus_tag="VNY79_04820"
                     /inference="COORDINATES: protein motif:HMM:NF012745.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HWX71799.1"
                     /translation="MPTTRRVFIGLPAYNEEIALPRLLDRVERLTTSAALPITVVIYN
                     DGSTDSTVPIARSRQQQMPLVILDCPINKGLGAGLRALVEYTVANADEDGVLVVMDCD
                     DTHDPAQIVDMLRGLDTGADVVIGSRYVRGALVRGVPPLRRLTALGAAALFKLVHPVR
                     GVWDYTCGYRAYRAGVLKKATSRYGDQLIAESGFACMVELLLKLNGLGARFAEIPLQL
                     RYDQKPTETKMGVGRHTRRLLLLLVRWRLRGFHEA"
     gene            complement(4125..>4430)
                     /locus_tag="VNY79_04825"
     CDS             complement(4125..>4430)
                     /locus_tag="VNY79_04825"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71800.1"
                     /translation="ASPFLPARFRHTQMEATRLTELVQAQPAPIYTIGATALNVLPYV
                     PGRVLFVTPGELETVAAPAWMVLPPADADALLSRQRSNLREATPSGVQAWRLLRLDR"
BASE COUNT          717 a         1475 c         1496 g          742 t
ORIGIN      
        1 gacgagcgcc tcgccgagtg gcggcggcgc gggctgcgca tcggcttcac caacggctgc
       61 ttcgatctcc tccatcgcgg ccatatccgg ctcctggccg aggcgcgcgc cgcctgcgat
      121 cgcctcgtgg tcgggctcaa cagcgacgcc tccacgcggc gtctcaaggg caatgcccgt
      181 ccgatcaatc cggtggaggc gcgcgccgac gtgctcgccg cgctcgaagc cgtcgacctc
      241 gtcgtcgtgt tcgaggagaa cacgccgctc gagctgatcc ggcgcgtgca gccggcggtg
      301 ctggtcaagg gcggcgacta caaacccgaa gaggtcgtgg ggcgtgaggt ggtcgaagcc
      361 gcgggtggca gcctgattct cgtcgatccg gtgccgggtc acagcaccac cgctatcgtc
      421 aagcgtgcgc agccggtgaa agagccggcc ggcgagtagg gccgcgcatg cgcaccgtct
      481 tccccgacag cgtcgaggac gagctcaagg ccgaattctt cggcagatcg cccgccggtt
      541 tcttcgttga ggtgggagcg aacgagccgc ggcatggctc gcagacctgg cagttcgaac
      601 aggccggctg gaacggcgtc ctggtggagc cgcagcccga actcgctgag cggctgcgcg
      661 cggggcggcg cgcccgaatt gtcgccgcgg catgctcgtc ccctgccaac gccggcggca
      721 agatgacgct attcctttcc gggccgcatt cgtcgctcaa acgcgacctc gtcgtgaccg
      781 gggtcgctcc gcacggaacg atcgaggttc cggcgcgtac gctcgatgac attctcgtcg
      841 agaccggcgc gccgacgccg atcgacttca tctcgattga tgtcgagggt catgaggtcg
      901 acgttctcag cgggttcgat gtcgcgcgct ggcggccgcg gctcattctg atcgaagacc
      961 atgtttcgag cctggcgacg catcgcttcc tgatgcgcgc cggctatcag ttgatccgcc
     1021 gtaccggcct gaacggctgg tacgtgccgc ggtcggaagc tccgcgcgtc gggctcggct
     1081 ggtggcagct cgcgcgcaaa tactatctcg cgctgccgtt ccgcgtgctg cgcgaccgca
     1141 agcggcgatg gcgcgatcgg ctgcgtcaac gccttggcct cggcgcgtgg cgccgacact
     1201 caccgctagc ccgcgcccag ctcatgtcga tcatcatgac gacatacaac cgcgatgacg
     1261 cgctcgaagc ggcgttgcgc gcgttgtccc ggcaatcgga ccgcaatttc gagatcatcg
     1321 tcgccgagga cgggtcgcgc ccggaaacgg cgcgcgtcgt cgagcgctgg gcgccgcgcc
     1381 tgccagtccc actgaagcac gcgcggcagg agcatgacgg ctttcgcggg ggcgagatcc
     1441 gcaaccgcgg cattcgcgcc agtgccggaa cctattgcat cttcctcgac ggcgattgcc
     1501 ttccgcgccc ggacttcgtc gccacgcacc gtgcgctggc gcagccggga tggttcgtga
     1561 ccggcaaccg catcctgttg tcgcgcgaat tcacggctgc cgtgctagcg gacgggacgg
     1621 cggtagaaac ctggagtctc ggcgcgctga tgcgcgaacg cctgcgcggc ggcgtcaatc
     1681 gcctgctgcc cgccctgcgc ctgccgctcg gaccgttgcg caatctgccg cgcggctgga
     1741 agggcgtgca gtcgtgcaat ctcgccatcg ccagggagga cctctaccgc atcgacgggt
     1801 ttgacgccgc ctataccggc tggggccgcg aagattccga tctggtggtg cgtctccagc
     1861 acgccggcgt gcgccgcaag gacggccggt ttgccactgg cgtgctgcat ctgtggcacg
     1921 tgcagaacga tcgctcgcaa ctgccggcga acgaggcgag gcttgacgcg gccatccgca
     1981 gcgatcgcgt gcgtgccttg agagggctgt ccttcctcgg cgacgacgtt gaaacaaggg
     2041 agccggcaac cttgctcagg caaggcggat gacggatatc gccgcggcca cgcggccgtc
     2101 gacgcggatg aatgggccac tgcgctccat gaagcgcaat gatataagcg gccgagcctg
     2161 atcgaggctg actttcgctg gcgggcccat gcggtttctt tgtgtcgtcg gaacgcgtcc
     2221 cgaagcgatc aagttggcgc cggtcattct ggaactggcg cggcattctc atgtgaccac
     2281 gatgtgctcc ggccagcacg gcaagctcgc gcaggagccg ctggcatggt tcggcatcag
     2341 gcctgacgat cagatcaccg tcgggtcaag atcgaagacg ttggcgacac gcaccggcgc
     2401 catgctcgcg ccgatggagc gcatgatcac caagcaccgc ccggacatcg tgatcgccca
     2461 aggcgatacc acgaccgtct tggtttcggc tctcacggcg ttctatctag gcgttccgtt
     2521 tgcccacgtg gaggccggac tgcgcaccgg caatttgcag gcgcccttcc cggaggagtt
     2581 caatcgtgtc gccgccgacc ggctggcgcg ctggtatttc tgcccgacgc gcggcgcggt
     2641 tgcgcacctg cgtgccgagc gggtcgatgc gtcgcggatc ttcctgaccg gtaataccgg
     2701 catcgacgcg ctgcggctgg cgctcgaacg ccttgcacct gcgccggaga ccgacggcag
     2761 gcggcggcaa atcctgctga cggcgcatcg gcgcgagaac caggggcgcc gcatggaagc
     2821 gatctgccag gcggtcatcg cgctggtgaa ggaattcgat gacgtcgagt ttacgatccc
     2881 cgtccatccg agcccggcgg ttcgcagcac cttcgaggcg ctgcgcgtgg cgcacgaccg
     2941 ggtgcggctg ctgccgccgc tgacctatga acggctggtg ctggagatgg cgcggtcgca
     3001 cctcatcctc acggattccg gcggcattca ggaggaggcg ccgttcctga agaaacccgt
     3061 cctcgtgctt cgcgacgtga ccgagcggcc cgaagcgatc gaattgggcg cggcgcggct
     3121 catcgggacc gaaacagcgg cgatcgtcgg agcggtaaga gagctcctga ccgacgaggc
     3181 ggcatacgcc aaaatggccg ccggcggctc gccgtatggc gacggctatg cggcggaacg
     3241 cattgctgcg gcgttcggcc tctgccagcg tccggtgagc gcggtgggat aatgaaaacc
     3301 atcaagtcct gatccgaaca gacctgcatc aatgccaaca acccggcggg tctttatcgg
     3361 acttcctgcg tacaacgagg agatcgcgct cccgcgcctc ctcgaccgcg tcgaacgcct
     3421 cacgacgtca gcagcgctgc cgatcacggt cgtgatctac aacgacggca gcaccgattc
     3481 gaccgttccg attgcccgaa gccggcagca gcagatgccg ctcgtgatcc tcgattgccc
     3541 gatcaacaag gggctcggcg caggcctgcg cgcactggtc gagtacaccg tggccaacgc
     3601 cgatgaggac ggcgttcttg tcgtcatgga ttgcgacgac acccatgatc ccgcgcaaat
     3661 cgtggacatg ctgcggggcc tcgacacggg cgccgacgta gtgattggct cacgctacgt
     3721 gcgcggcgcg ctggtgcgcg gggttccgcc actgcgccgg ctcaccgcgc tcggcgcagc
     3781 ggccttgttc aagctcgttc acccggtgcg cggcgtgtgg gactacacct gcggctatcg
     3841 cgcctatcgc gccggcgtgc tgaaaaaagc aacgagccgc tatggcgatc aattgatcgc
     3901 ggaatcaggc ttcgcctgca tggtcgaatt gctcctgaag ctcaacggcc tcggtgcccg
     3961 gttcgcggaa attcccctgc agctgcgata cgatcagaaa ccgaccgaaa ccaagatggg
     4021 tgtcggccgc cacacgcggc ggctgttgtt gctgctcgtt cgctggcggc tgcgcggttt
     4081 tcacgaagct tgagacggcg gcgcgaagcc gactgcgcgg cgcgttatct gtcaagccgc
     4141 agaaggcgcc acgcctgcac gccgctcggc gtcgcctcgc gcaggttgct ccgctgccgc
     4201 gacagcaaag cgtcggcgtc ggcgggaggc agcaccatcc aagccggcgc cgcgaccgtt
     4261 tccaactcgc cgggcgtcac gaaaagaacg cgccccggaa catacggcag cacgttgagc
     4321 gccgtcgcgc cgatcgtgta gatcggcgcc ggttgagcct gcaccagttc ggtgagccgc
     4381 gtggcttcca tctgcgtgtg gcggaaacgt gccggcagaa agggcgacgc
//
LOCUS       DATMQB010000152         3738 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1905489, whole genome shotgun sequence.
ACCESSION   DATMQB010000152 DATMQB010000000
VERSION     DATMQB010000152.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3738)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3738)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3738
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1905489"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(189..932)
                     /gene="phoU"
                     /locus_tag="VNY79_04830"
     CDS             complement(189..932)
                     /gene="phoU"
                     /locus_tag="VNY79_04830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0051049 - regulation of transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HWX71801.1"
                     /translation="MPMNVSDHTTRVFDSDLIKLTQLVAQMGGFAQKQVTDAIDALSR
                     RDTALARRVIEADERVDELQRQIEEKAIATIALRQPMAVDLRGLVAMLRIANDLERVG
                     DLAKNIGKRVIAVSGDNSQRTLMRGLRHMASLVVAQLASVLDSFVDRNPDKALRVWEA
                     DKDVDALYVSLFRELLTYTMEDPGTISMCIHHLFCAKNIERIGDHATNIAEAVHYMVA
                     GYAIAGERPKGDTSSYVGESPVVAAKVPA"
     gene            1264..1527
                     /locus_tag="VNY79_04835"
     CDS             1264..1527
                     /locus_tag="VNY79_04835"
                     /inference="COORDINATES: protein motif:HMM:NF037968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SemiSWEET transporter"
                     /protein_id="HWX71802.1"
                     /translation="MMAPAVVDAVGAAGAALTTLCWVPQAVKIIRDRETRAISLPGTA
                     LCVIGVVLWLVYGIAITDGPLIGSSLVTFAMTGVILVLKIRHG"
     gene            complement(1546..2067)
                     /locus_tag="VNY79_04840"
     CDS             complement(1546..2067)
                     /locus_tag="VNY79_04840"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990204 - oxidoreductase complex
                     [Evidence IEA];
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HWX71803.1"
                     /translation="MRRTLFESLTRRPLTEAPPAPDGASLAELAASVDRAARRRLGRS
                     LAIREVDAGSCNGCELEIHALNNAFYDLERFGLRFVASPRHADVLLVTGPVTRNMREA
                     LERTYQATPDPKWVVAVGDCAADGGIFAGSYAVAGGVDAVVPVDLHIRGCPPTPLQLL
                     QGLLALLRQGSAA"
     gene            complement(2092..3666)
                     /locus_tag="VNY79_04845"
     CDS             complement(2092..3666)
                     /locus_tag="VNY79_04845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011655038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase expression protein HypE"
                     /protein_id="HWX71804.1"
                     /translation="MPSLADIIPQGDRVDSHRPWPRVVVTADAWRHVTGAIAAGRATL
                     LGLWGDSNATPAVHMAIMAEATGEIAVLTLACPAGTFPSVGALHRPAIRLERAIHSLY
                     GFEAVGAVDQRPWLDLGFWNVQHPLASDSPQRGEAHSPQRSEGVAPSPLPYSFLPVEG
                     ESLHQIPVGPVHAGIIEPGHFRFTASGETVVRLEQRLGYVHKGIESLMGGATIERAAR
                     LAARTSGDSTVAYSIAFAHAIEAALAVEPPSRARHLRALMAELERLANHFGDIGAVCN
                     DASFSLMHAHCGILREQVLRAAAACFGHRLMMDRVVPGGVAADINVDGANLIRALLAD
                     VRLRLPPLVELYDNTTSLQDRTAATGIVSAELVSQFGASGYVGRASGRNFDARKAPAY
                     PPYDRLEFTVPVLAAGDVNARVWIRVREVEQSLSLIEQILAGLPDGPIVVAIGDGDRE
                     TGGGSSEGLGLAEGFRGDVFVWVRLVALKVARCHLRDPSWFQWPLLEAAIEGNIVADF
                     PLCNKSFNCSYSGHDL"
BASE COUNT          649 a         1188 c         1288 g          613 t
ORIGIN      
        1 ggccgcggcg aaccggcgtg cagagcgtga tccgatcaaa cgcatcgcga tcgctgacag
       61 aaatgggccg catggcgccg aacgcgctga cacggcaagc gcgtcagcaa tagaccgtta
      121 accctaatga gcagttaacg agcgagacgg cgtggcaatg gccagctagg tcgggaagcg
      181 ccgccggcct aggccggcac cttggccgcc acgacagggc tctcgccgac atagctcgac
      241 gtgtcgccct tgggccgctc gccggcgatg gcgtagcccg cgaccatgta gtgcacggct
      301 tcggcgatat tggtggcgtg atcgccgatg cgctcgatgt tcttcgcgca gaacaggtga
      361 tggatgcaca tcgagatcgt tccgggatct tccatcgtgt aggtcagcag ttcccggaac
      421 agcgaaacgt agagcgcgtc cacgtccttg tcggcctccc agacgcggag cgccttgtcg
      481 gggttgcggt cgacgaagct gtcgagcacg gaggcgagct gcgccacgac gagcgaagcc
      541 atatggcgga gcccgcgcat cagcgtgcgc tgcgagttgt ccccgctcac cgcgatgacg
      601 cgcttgccga tgtttttagc gaggtctccg acccgctcaa ggtcgttggc gatgcgcagc
      661 atcgccacca gaccgcgcag atcgacggcc atcggttggc ggagcgcgat cgtggcaatc
      721 gccttctcct cgatctgccg ctgcagctcg tcgactcttt cgtcggcctc gatgacgcgc
      781 cgcgccagcg cggtgtcgcg tcgcgacagc gcatcgatcg cgtcggtgac ctgcttctgg
      841 gcgaagccgc ccatctgcgc taccagctgc gtgagcttga taaggtcgga atcgaagacg
      901 cgcgtggtgt gatcagaaac attcatgggc atggctgcgg tcgttggcgg tcctctcctg
      961 ggccaacgct gctgtcgcag gcacaatgcg gccggcgcac gcggcgggtc caacgcattg
     1021 atgattctac gattcgtgcg tgacgatccg atgacacggc cggcaagctt cgcgcgcatg
     1081 ctttgtttgc tgcacgctgt catctcgctc acaccgaatc acggataaat ccctgattcg
     1141 ccgcgccggc acgcgaagtt cgtgagggag cgcaatcgct tcgggtcgtg tcgcatatcc
     1201 ggcatgctca aaaaaccggg ttcgctgttc ggaggatgcg cagatgtcgc acacggggat
     1261 tgaatgatgg cgccagcggt cgtcgatgcg gtcggtgcgg ccggcgccgc actgaccacg
     1321 ctctgctggg tcccgcaggc ggtaaagatc atccgcgacc gggagacgcg ggcgatttcg
     1381 ctgcctggca cagcgctgtg cgtgatcggc gtggtgctct ggctggtcta cgggatcgcg
     1441 atcaccgatg ggccgctgat cggctcgagc ctcgtcacct ttgcgatgac cggggtcatc
     1501 ctcgtgctca agatccgcca cggctgacgc acgaggggca ctggttcatg cggcggagcc
     1561 ttgccggagc agcgccagaa gaccttgcaa cagctgcagc ggtgtcgggg gacagccgcg
     1621 gatgtgaaga tcgacaggaa cgacggcatc gacgccgccg gcgacggcgt agctgccggc
     1681 gaatattccg ccgtcggccg cgcaatcgcc gaccgcgacc acccacttcg ggtccggcgt
     1741 cgcttggtag gtgcgctcca gcgcctcgcg catattgcgg gtgaccgggc cggtaacgag
     1801 cagcacgtcg gcatggcgcg gcgaggcgac gaagcgtagt ccgaagcgct cgaggtcgta
     1861 gaaggcattg ttgagagcat ggatttccag ttcgcaaccg ttgcaggatc cggcgtcaac
     1921 ttcgcggata gcgaggctgc gtccaagccg gcgccgcgcg gcgcggtcga cgctggcggc
     1981 caattcagcg agcgaggcgc catcgggtgc cggcggcgcc tccgtcagcg gacggcgcgt
     2041 gaggctctcg aacaaggttc tgcgcatgca atgctgcctt ccggacgtgc gctagagatc
     2101 gtgccccgaa taggagcagt tgaacgattt gttgcaaagc gggaagtcgg ccacgatgtt
     2161 gccctcgatg gcggcttcga gcagcggcca ttgaaaccag gatggatcgc gcaagtgaca
     2221 gcgcgcgacc ttgagcgcga cgagccgcac ccagacgaac acgtcgccgc ggaaaccctc
     2281 ggctagtcct agtccttcgc tgctgccgcc gcccgtctcg cggtcgccgt cgccgatcgc
     2341 aaccacgatc ggcccgtccg gcagtcccgc gaggatttgc tcgatgaggc tcaggctctg
     2401 ctccacttcg cgaacgcgaa tccagacgcg cgcattcacg tcgccagcgg cgagcacagg
     2461 gacggtgaat tcgagccgat cgtagggcgg gtaggcgggc gccttgcggg catcgaaatt
     2521 tcgtccgctg gcacgaccga cgtagccgga cgcgccgaat tgactcacga gttccgcgct
     2581 gacgatcccg gtcgcagcgg tccggtcctg cagcgaggtg gtgttgtcgt aaagctccac
     2641 gagaggcggg agccgcagcc gtacgtccgc cagcagagca cgaatcagat tggcgccgtc
     2701 tacgttgata tcggcggcga cgccgccggg gacgacgcga tccatcatca ggcgatggcc
     2761 gaagcacgcg gcggctgcgc gcagcacctg ctcgcgcagg atcccgcaat gcgcatgcat
     2821 gagcgagaac gaggcgtcgt tgcagaccgc gccgatgtca ccgaagtgat tggccagccg
     2881 ctcgagctcg gccatcagcg cccgcagatg gcgtgcccgc gacggcggtt cgacggcgag
     2941 cgccgcttcg atggcgtggg cgaaggcgat cgaataggcg acagtgctgt cgccggaggt
     3001 gcgcgcggca agccgcgccg cccgttcgat ggtcgcgccg cccatcagcg actcgatgcc
     3061 cttgtgcacg tagccgagcc gctgttcgag ccgcaccacg gtctcgccgc tggcggtaaa
     3121 gcgaaaatgg cccggctcga tgatgccggc atgcaccggg cctacaggaa tctgatgcag
     3181 gctttcgcct tcgaccggca gaaacgaata gggtaggggc gatggcgcta cgccttcgct
     3241 cctctgcggc gagtgcgcct cgccgcgctg gggagagtcc gatgcaagcg gatgctgcac
     3301 gttccagaag ccgaggtcga gccatggtcg ctggtcaact gcgccgactg cttcgaaccc
     3361 gtagagacta tggatcgcgc gttcgagccg aatggcgggc cggtgcagcg ccccgacgga
     3421 gggaaatgtg ccagccggac aggcgagagt gagcacggca atctcgccgg tcgcctccgc
     3481 catgatcgcc atgtggaccg ctggcgtggc gttggaatca ccccagagcc cgagcagtgt
     3541 cgcccggccg gcggcgattg cgccggtgac gtggcgccag gcgtcggcag tcacgacgac
     3601 gcgcggccag gggcgatggc tgtccacgcg gtccccctgc gggatgatgt cggccagcga
     3661 cggcatcagt taacccagca atccggcgac gttctggaac caggcgacaa gcgccggcgg
     3721 catgtagaca ccggcggc
//
LOCUS       DATMQB010000153         5119 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2836957, whole genome shotgun sequence.
ACCESSION   DATMQB010000153 DATMQB010000000
VERSION     DATMQB010000153.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5119)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5119)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5119
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2836957"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..258)
                     /locus_tag="VNY79_04850"
     CDS             complement(<1..258)
                     /locus_tag="VNY79_04850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HWX71805.1"
                     /translation="MSASDPPILTVAETLPKSFLLAVRTRGDRPALREKVLGIWKTIT
                     WNEWLERTKEIAFALDGLGFRPGDVASVLANTVPEWCYADLG"
     gene            complement(404..1183)
                     /locus_tag="VNY79_04855"
     CDS             complement(404..1183)
                     /locus_tag="VNY79_04855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009737123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX71806.1"
                     /translation="MSAPAPLLSVRNLETFYGRIMAVRGVSLEVPHGEIVTVLGANGA
                     GKTTILKTISGVLDPQKGTIELEGKPIHGMDPDRIVKLGLSHVPEGREVFPFLTVAEN
                     LAMGAFLRGDRDAVARDLERIYGYFPRLQHRLDQRAGLLSGGEQQMLAISRGFLSRPK
                     LLLLDEPSLGLAPLLVKEIFTIVRRLNAEEGISILLVEQNAHMALAIARYGYVLEVGR
                     FVMADTCARLAASRDIQEFYLGAREIGARGERRWKRKKTWR"
     gene            complement(1180..1950)
                     /locus_tag="VNY79_04860"
     CDS             complement(1180..1950)
                     /locus_tag="VNY79_04860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016846279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX71807.1"
                     /translation="MSLLRLDTISLRFGGLTAVDGVSFAVEPGEIFTMIGPNGAGKTS
                     IFNMISRFYQPSGGRIFFEDVEITELPPYKIAELGVARTFQNIELFDNATVLANLLVG
                     RHRHRRTRIYEDILFLPKVRAAEYADRHRVEEVIEFLDLQRYRDQLIASLPYGVRKVC
                     ELARALCTEPKILLLDEPSSGLNVEETDDMVYWINDIRSELGITVLMVEHDMTLVNRV
                     SDRVLALDYGRVVALGAPQEVAHDPNVIAAYLGPEGAV"
     gene            complement(1947..3092)
                     /locus_tag="VNY79_04865"
     CDS             complement(1947..3092)
                     /locus_tag="VNY79_04865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX71808.1"
                     /translation="MRPIFQTDYGQDIQLFRHGGYWWSYGVLLLLVLAAPLAVGSYLQ
                     SQIVFVFIYAIVGVGLLILAGFAGQVSLGHAAFLAIGAYTAGYMQRLGVPFLIYLPLS
                     VVLTGAVGALVGFPALRLSGIYLVIATIAFGFIIEEVAARWESVTNGNDGMRIKQIEL
                     FGFAVSRDGYSFYYLCLGLLILVLVLALNLLRSPTGRAFIAIRDSETAAQSIGINLSV
                     YKVVAFSISAGMTGLAGCLYAHKMSFISPEMFTLLLSLEFVIVILIGGVGSLHGAVLG
                     SIFVVMVDPFLSYLKDDLPRGIGELARSFGVANPGALQDTLAAIGGAAGLKGTIYGLI
                     IIVFIVFEPYGLYGRWLKIRLYFELFPLYKKATFKRQKTYVKSERNR"
     gene            complement(3097..3969)
                     /locus_tag="VNY79_04870"
     CDS             complement(3097..3969)
                     /locus_tag="VNY79_04870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX71809.1"
                     /translation="MLDFIQQLVGGIALGCVYGLIALGFVLIYKATEVVNFAQGDLMM
                     LGGFFAYGFIDQLGLNYWVGFLFAIIAMAAFGSLVERVIVRPILGYPQFSIVMVTIGL
                     GFALRAVVGMIWGTDDLRIDTPFSSGVMHVGKLVIAHDKLSVIVATVLLCGALWLYFN
                     KTRMGVAMQATSQNMLGAYYMGIPVKRVFSLIWAISAAVAGFAGVLLAPIAFIHTNIG
                     FLGLKAFPAAVLGGFGSIPGALAGGLIIGVAETLSGFYLPEGFKDVAAYILLLVVLMV
                     RPEGLFGLNLRKKV"
     gene            complement(4113..4892)
                     /locus_tag="VNY79_04875"
     CDS             complement(4113..4892)
                     /locus_tag="VNY79_04875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acyl homoserine lactonase family protein"
                     /protein_id="HWX71810.1"
                     /translation="MAMLGAVPASAAGADKLYVLDCGHMSAADQSRWSSGVNVGVPIE
                     LSDNCYLIHDPQGWFLWDTGLPDALAATPEGTTSANGALHVKRPKTLAGQLDELGVKP
                     ADIKAMAISHTHPDHIGNVELFPQVMLYVQKVEYGWPGADGAPRFNPNHPVTLLEGDR
                     DVFGDGSVVIISTPGHTPGHQSLLVRLPKTGTVVLSGDAVHFKANWDNRRVPPFNTDK
                     DKTLASMQRIADIVAKENGQLWINHDKPQTDAQKKPPEFYD"
BASE COUNT          983 a         1577 c         1710 g          849 t
ORIGIN      
        1 cccgaggtcg gcgtagcacc attccggcac cgtattggcg agaaccgaag cgacgtcgcc
       61 ggggcggaag ccgagcccgt cgagggcgaa ggcgatctcc ttggtgcgct cgagccattc
      121 gttccaggtg atggtcttcc aaatgcccag taccttttcg cgcaaggcgg gccggtcgcc
      181 gcgcgtcctc actgcaagca gaaaactctt cggcaaggtt tcggccacgg tcaagatcgg
      241 cgggtcagag gcggacattc tccatgattt cggcggcttc gccgcggcgg caggcggaag
      301 atcgcggccg gcgtcaggtt ttcgctcatc gaccatttgc ttcatcgcca ggtccccttc
      361 cggcccgccg ctaatcgcca gtcttttcat cgccagcgtc tcttcatcgc cacgtcttct
      421 ttcgcttcca acgacgctcg ccgcgcgcgc cgatctccct ggcgccgaga tagaactcct
      481 ggatgtcacg gctggcggca agccgcgcac aggtatcggc catgacgaag cgcccgacct
      541 cgagcacata gccgtagcgc gcgatcgcaa gcgccatgtg cgcgttctgc tcgaccagca
      601 ggatcgagat accctcctcg gcattgaggc ggcgcacgat ggtgaagatt tccttgacca
      661 ggagcggcgc caggccgagc gaaggctcgt cgagcagcag gagttttggg cggctgagaa
      721 agccacggct gatcgccaac atctgctgct cgccgcccga cagcaggccg gcgcgctggt
      781 ccaggcgatg ctggagccgc ggaaaatagc cgtagatgcg ctcgaggtcc cgtgccacgg
      841 catcgcggtc gccgcgcagg aacgccccca tggcaagatt ttcggcgacg gtcaggaacg
      901 ggaagacttc gcggccttcg ggcacgtggc tgagcccgag cttgacgatg cggtccgggt
      961 ccatgccgtg gatcggcttg ccctcgagct cgatcgtgcc cttctgcggg tcgagcacgc
     1021 cggagatggt tttgaggatg gtggtcttgc cggcgccgtt ggcgccgagc acggtgacga
     1081 tctcgccgtg cggcacttca aggctgaccc cgcgcaccgc catgatgcgt ccgtagaagg
     1141 tctcgaggtt gcggaccgag aggagcggtg caggagcgct cataccgccc cctcgggtcc
     1201 gagataggcg gcgatcacat tgggatcgtg ggccacttcc tgcggcgccc cgagcgcgac
     1261 gacccggccg tagtcgaggg cgagcacgcg gtcggacacg cgattgacca gcgtcatgtc
     1321 gtgctcgacc atcagcaccg tgatgccgag ttcggagcgg atgtcgttga tccagtagac
     1381 catgtcgtcg gtttcctcga cgttgagccc ggaggacggc tcgtcgagga ggagtatctt
     1441 cggctcggtg catagcgcgc gcgcgagctc gcacaccttg cgcacgccat agggcaagct
     1501 ggcgatcagc tggtcgcggt agcgctgcag atcgaggaac tcgatgacct cctcgacgcg
     1561 atggcggtct gcgtattcgg ccgcgcgcac cttgggcagg aacaggatgt cctcgtaaat
     1621 tcgcgtgcgg cggtggcggt ggcggccgac caggagattg gcgagcacgg tcgcattgtc
     1681 gaacagctcg atgttctgga acgtccgcgc gacgccgagt tcggcgattt tgtacggcgg
     1741 cagctccgta atctcgacat cctcgaagaa gatgcgcccg ccgctcggct ggtagaagcg
     1801 cgagatcatg ttgaagatcg aggtcttgcc ggcgccgttc gggccgatca tggtgaatat
     1861 ctcgccgggc tcgacggcaa agctcacgcc gtcgacggcg gtaagcccgc cgaagcgcag
     1921 cgagatggtg tcgaggcgga gcaggctcac cggttacgct ccgatttgac gtaggtcttc
     1981 tgccgcttga acgtcgcctt cttgtagagc gggaacagct cgaaatagag ccggatcttg
     2041 agccagcggc cgtagagccc atacggctcg aagacgatga agacgatgat gatgaggccg
     2101 tagatggtgc ccttgagccc ggcggcgccg ccgatggccg cgagcgtatc ctgtagcgcg
     2161 cccggattgg cgacgccgaa ggaacgcgcc aattcgccga tgccacgcgg caggtcgtcc
     2221 ttgaggtagc tgaggaacgg atcgaccatc accacgaaga tcgagccgag cacggcgccg
     2281 tgcagactgc cgacgccgcc aatgaggatg acgatgacga actcgagcga gagcagcagc
     2341 gtgaacattt ccgggctgat gaaggacatc ttgtgcgcat agaggcagcc ggcgagcccg
     2401 gtcatgccgg cgctgatcga gaacgccact accttgtaga ccgagagatt gatgccgatg
     2461 ctttgcgccg cggtctcgct gtcgcggatg gcgatgaagg cgcggccggt cggcgagcgc
     2521 aaaaggttga gcgcgagcac cagcacgaga atgaggagac cgaggcagag gtagtagaag
     2581 ctgtagccgt cgcggctgac ggcgaagccg aacaactcga tctgcttgat ccgcatgccg
     2641 tcattgccgt tggtcacgct ttcccagcgc gcggcgactt cctcgatgat gaagccgaac
     2701 gcgatcgtgg cgatgacaag atagatgccg gaaaggcgca gcgccgggaa accgacgagc
     2761 gcgccgacgg cgccggtgag caccaccgag agcggcagat agatgagaaa cggcacgccg
     2821 agccgctgca tgtagccggc ggtataggcg ccgatggcaa ggaaggcggc gtgaccgagc
     2881 gatacctgcc cggcgaagcc ggcgaggatc aggagcccga cgccgacaat cgcatagatg
     2941 aagacgaaga cgatctggct ctgcaggtag gagccgacgg ccagcggcgc ggcaagaacg
     3001 agaaggagga gcacgccata ggaccaccaa tacccgccgt ggcggaagag ctggatgtcc
     3061 tggccgtagt cggtctgaaa gatcggccgc accggtctac accttcttgc gcaggttgag
     3121 gccgaacagc ccttccggcc gcaccatcag caccacgagg aggagaatgt aggcggcgac
     3181 gtccttgaac ccttcgggaa ggtagaagcc cgagagcgtc tcggcgaccc cgatgatgag
     3241 accgccggcg agcgcgccag ggatgctgcc gaagccgccg agcacggccg ccggaaacgc
     3301 cttgaggccg agaaagccga tattggtgtg aatgaaggcg atcggcgcca ggagaacgcc
     3361 ggcaaagccc gcgaccgcgg cgctgatcgc ccagatcagc gaaaacaccc gcttgaccgg
     3421 gatgcccatg tagtaggcgc cgagcatgtt ctgcgacgtc gcctgcatgg ccacgcccat
     3481 acgggtcttg ttgaaataca gccacagcgc gccgcacagc aggaccgtcg ccacgatgac
     3541 ggacagcttg tcatgggcga tgaccagctt gccgacatgc atgactcccg aggagaacgg
     3601 cgtatcgatg cgcagatcgt ccgtgcccca gatcatgccg acgaccgccc gcagcgcgaa
     3661 gccgagcccg atcgtcacca tcacgatgga gaattgcgga tagccgagga tcggccgcac
     3721 gatcacacgt tcgaccaggc tgccaaacgc cgccatggcg atgatcgcga acagaaagcc
     3781 aacccaatag ttgagtccga gctggtcgat gaagccgtag gcgaagaagc cgcccagcat
     3841 catcaggtcg ccctgggcga aattgacgac ctcagtcgcc ttgtagatga ggacgaagcc
     3901 cagtgcgatc aggccataga cgcagccgag cgcaatgcct cccaccaact gctgaatgaa
     3961 atccagcatg ccggacgttc cccaagacgt cgcttccgcc ctctggaggc tttgcgttct
     4021 gtttcttgct ttgcggcgag cataggcggc acccgccgtt tgctcaaggc cgcatcctct
     4081 cgccggaacg ggccaaaagc gcgcgcggcc gcctagtcgt agaactccgg cggcttcttc
     4141 tgcgcgtcgg tctgcggctt gtcgtggttg atccagagct ggccgttctc cttcgcaacg
     4201 atatcggcga tgcgctgcat cgaggccaag gtcttgtcct tgtcggtgtt gaacggcggc
     4261 acgcggcgat tgtcccagtt ggccttgaag tggacggcgt cgcccgagag gacaacggtg
     4321 ccggtcttcg gcaacctgac cagcagcgac tgatgaccgg gcgtgtggcc cggcgtcgaa
     4381 atgatcacaa cggaaccgtc gccgaacaca tcacggtcgc cctcgagcaa ggtcaccggg
     4441 tgattgggat tgaagcgcgg cgcgccgtcg gcgcccggcc atccgtattc gaccttctga
     4501 acgtagagca tgacctgcgg gaacagctcg acattgccga tatggtcggg atgggtatgc
     4561 gagatcgcca tcgctttgat gtcggcgggc ttgacgccga gctcgtcgag ctggccggcg
     4621 agcgttttcg gccgtttcac gtggagtgcg ccgttggcgc tggtcgtgcc ttccggcgtc
     4681 gcggcaagcg cgtcgggaag gccggtatcc cagaggaacc agccctgggg gtcatggatc
     4741 aggtagcaat tgtcggaaag ctcgatcggc accccgacat tgacgcccga agaccagcgc
     4801 gactggtcgg cggcggacat gtggccgcaa tcgaggacgt agagcttgtc ggcgccggcg
     4861 gccgaggccg gaacggcccc gagcatcgcc ataccggcgg aagcggcgag aacagcgagc
     4921 ctcatgcatc cctccttcag tagtattcct cgtcgatctc cgcacgctcg ccttggattc
     4981 gcacggcgca gccgcggcgc gccggaaacg atgctcatcc cgccagcgcc gccaggatcc
     5041 gtgcccagct gcggatgccc ttgtggaagc acttgagatc gtatttctcg ttgggtgaat
     5101 gcacgcggtc atcgtcgag
//
LOCUS       DATMQB010000154         5000 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1906940, whole genome shotgun sequence.
ACCESSION   DATMQB010000154 DATMQB010000000
VERSION     DATMQB010000154.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5000)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5000)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5000
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1906940"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(328..477)
                     /locus_tag="VNY79_04880"
     CDS             complement(328..477)
                     /locus_tag="VNY79_04880"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71811.1"
                     /translation="MLVTRVEQWWVEAASAEEAQELLASGQGHHASIGERVHVELGMM
                     SEDAA"
     gene            713..1639
                     /locus_tag="VNY79_04885"
     CDS             713..1639
                     /locus_tag="VNY79_04885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0045027 - DNA end binding [Evidence IEA];
                     GO_process: GO:0006303 - double-strand break repair via
                     nonhomologous end joining [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ku protein"
                     /protein_id="HWX71812.1"
                     /translation="MAPRAYWKGYLRLSLVSCPIALFPATSEREKVSFHQINRATGNR
                     IRYRKVDTETGEEVPSDQIIKGYEVAKGEYVEISDEELESIALESTKTIEINEFVPRS
                     EIDDLYNVRPYYIAPDGKVGQDAFVVIRSIIEQMKMVAVGRVVLTSREHVMAMEPRGK
                     GLMGTLLRYPYEVRDEKEFFDDIPNVKLTKDMMDLARHIVETKTGHFKPAEFEDHYEH
                     ALKELIAKKSKGEKIEIPKEQPTGKVINLMDALRRSVQAEAQSGRPPAAKKGRKAAAG
                     QKEMLLPIAGKKTAQQAESGKARTGARHRKAG"
     gene            1763..2614
                     /locus_tag="VNY79_04890"
     CDS             1763..2614
                     /locus_tag="VNY79_04890"
                     /inference="COORDINATES: protein motif:HMM:NF012774.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thermonuclease family protein"
                     /protein_id="HWX71813.1"
                     /translation="MIGWRDGGLAAAVAAHLAVMFGGLGAAAQEQPVSALPCGGDAIA
                     RGAAGRIVDGRTFALEDGREVRLAAIEVPPLAAPGEAREAEAAPGGVAAKDALAALLE
                     GADIVLRRADAAADRYGRILAYTSTAREGIERSVQADLLAGGFARVGGRIGTRECATE
                     LLARERAARKAKLGLWAISYYDLLDADNPADVQAKRGRFALVEGKVVSVRESGATIYV
                     NFGRRWTEDFTVTILKRNERSFAAAGVEPKRLSGRRVRVRGWIEERGGPWIEATRPEQ
                     IELIDRE"
     gene            2722..4143
                     /locus_tag="VNY79_04895"
     CDS             2722..4143
                     /locus_tag="VNY79_04895"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metalloprotease"
                     /protein_id="HWX71814.1"
                     /translation="MLAACTASAPPVETQASLPPPAIKPAEVEISPAALREHQRILAA
                     YGGVYNDPRLQGMLEQTVDRLVAASERPDLHYRVTMLNSQSINAFALPTGQLYVTRGL
                     IALANDESELASVLAHEMGHVLARHAAIREEQARQAALVNRVVTDVISDPEVGALALA
                     KSKLALAGFSRAQEFEADAIGIGVAARAGYDPYGAVRFLTSMEHNSELRPQQNGAAIN
                     PRAPDFLSSHPATPERISNALANARQFNAPQPSGGGRDKAAYLSGIDGIVFGEDPSEG
                     FVRGRRFLHPRLGFTFTAPDGFSLDNTAQAVLGVKHGGGQALRLDVVRVPAEQKLAEY
                     LTSGWIEHIDPGTVEEVTINGFPGATAAAKGDQWDFRLYAVRFGSDVYRFIFAAKHRS
                     PETDRIFRESIGTFRRMSLAEIEDAKPLRLQVVTVAPSDTVEKLATRMAVADRPVERF
                     RVLNGLDPGDRLKSGSEVKIVVE"
     gene            complement(4200..>5000)
                     /locus_tag="VNY79_04900"
     CDS             complement(4200..>5000)
                     /locus_tag="VNY79_04900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HWX71815.1"
                     /translation="VEFLDHILPGIDSEVARQFHRLQQKQGLAFKLSSKVTAIDASGK
                     VLEVKVEPAAGSGAAEMIEADIVLVAIGRVPYTEGLGLEAVGVNRDNRGRVVVDAHLR
                     TNVGGIYAIGDAIAGPMLAHKAEDEGVAAAEVIAGQAGHVNYEVIPNVVYTHPEIASV
                     GKTEEELKAAGVVYQVGKFPFSANARARANLATDGFVKILADAKTDRVLGVHILGPDA
                     ETMIAEAAIAMEFGASAEDIARTCHAHPTLSEAVKEAALAVAKRAINF"
BASE COUNT          891 a         1657 c         1645 g          807 t
ORIGIN      
        1 gtgcgaaaca accgttcggt gaattcgtac aaggcggcca gctcattgac gcggctggcc
       61 agggaccctt gggcgcgatc acggtcggtc aagtcggtac gcctcttgcc ggtcggaaat
      121 gcgcgtgacg aaagacacac aacttggaag tatagatgac cggtgccgcg ccggaccagg
      181 ggggccgcgg atcccacacg cggaaccttt ctcgcagatt ttaatatttt tctggggccg
      241 agctcgacgc tttcaaaccc gcggcgcgtt tgcacaaggc cacaacaggc aacgactccg
      301 cggcgagctg ccgccgacgg cctgcgctca cgccgcgtct tcgctcatca tgcccaactc
      361 gacatggacg cgctcgccga tcgaggcgtg atggccctgt ccggaagcga ggagttcctg
      421 cgcctcttcg gcgcttgcgg cttcgaccca ccattgctcg acgcgcgtga ccagcatggt
      481 tgcgtagaag gtccgcagtt gtggcctttg tcgtcgcata tgggctcttg cggtcatctt
      541 ccggtcccaa ccgaatcaat tctaagcaat cactttaccc taaacccggc tcttctggaa
      601 caaaccagaa acacaacgca gcgcgtacct ccacccggcg cctggaacac gctattatcc
      661 acatcgttgt cacaaaaacc cgactgcagt tgccgtcagt aaggagcaga ccgtggcccc
      721 gcgtgcgtat tggaaaggct atttgcggct ctcgctcgtt tcctgcccga tcgccctttt
      781 tccggcgacc tccgaacggg agaaggtcag ctttcatcag atcaatcgcg cgaccggcaa
      841 ccgcatccgc taccgcaagg tcgacacgga gaccggcgag gaagtgccgt ccgaccagat
      901 catcaagggc tacgaggtgg ccaagggcga atacgtcgag atcagcgacg aggagcttga
      961 atcgatcgcg ctggaaagca ccaagacgat cgagatcaac gagttcgtgc cgcgcagcga
     1021 gatcgatgac ctctacaacg tccgccccta ctacatcgct cccgacggca aggtggggca
     1081 ggacgccttc gtcgtgatcc gcagcatcat cgagcagatg aagatggtcg cggtcgggcg
     1141 cgtggtgctc accagccgcg agcacgtgat ggccatggag ccgcgcggga agggcctgat
     1201 gggcacgctg ctgcgctatc cgtacgaggt gcgcgacgag aaggaatttt tcgatgacat
     1261 cccgaacgtg aagctcacca aggacatgat ggatctggcg cggcatatcg tcgaaaccaa
     1321 gaccgggcac ttcaagcccg cggaattcga ggatcactac gagcacgcgc tcaaggaact
     1381 gatcgcgaaa aagtccaagg gcgaaaagat cgaaatcccg aaggagcagc cgaccggcaa
     1441 ggtcatcaac ctcatggacg ccctgcgccg ctcggtccag gcggaggcgc agagcggacg
     1501 cccgcctgcg gcgaagaaag gccgcaaggc cgcggcgggg caaaaggaga tgctgctgcc
     1561 gattgccggg aagaagacgg cgcaacaggc cgagtcaggc aaggcgcgaa cgggcgcacg
     1621 acacaggaag gcgggctgac cggcggctgg gccccggcca ctgcccccta cccacctctt
     1681 gtcccaaccg cgggtcagca ggccggacgc gtgacgtcat ttgccgtagt gctgccgcat
     1741 tgccgccttt ccattgacgc cgatgatcgg ctggcgggac gggggcctgg ccgcggccgt
     1801 tgcggcccat ctggcagtca tgttcggagg tctcggcgcc gcggcgcagg agcaacccgt
     1861 gagtgcgctt ccgtgcggcg gcgatgccat cgcgcgcggg gcggcgggcc gtattgtcga
     1921 cggtcgcact ttcgctcttg aggacggccg cgaagttcgt ctcgccgcta tcgaagtgcc
     1981 gccactcgct gccccgggag aagcccgaga ggccgaagcc gcgccgggcg gcgttgccgc
     2041 gaaggacgcc ctcgcggcgc tgctcgaagg agccgacatc gtgctgcggc gtgcggacgc
     2101 tgccgccgac cggtacggca ggatcctggc ctacacgtcg acggcccgcg aggggatcga
     2161 acgctcggtc caggccgact tgcttgccgg gggatttgcc cgcgtcggcg gccggatcgg
     2221 cacgcgcgaa tgcgcgacgg aactcctcgc ccgcgaacgg gccgcgcgca aggccaagct
     2281 tggcctctgg gccatttcgt attatgactt gctcgacgcc gacaaccccg ccgatgtgca
     2341 ggccaagcgc ggtcgctttg cgctggtcga aggcaaggtg gtatcggtgc gtgaaagcgg
     2401 agccacgatc tacgtcaact tcggacgacg gtggaccgag gatttcactg ttacgattct
     2461 gaagcgaaac gagcgtagct tcgcagccgc aggcgttgag ccgaaacggc tctcggggcg
     2521 gcgcgtccgg gtgcgcggat ggatcgagga gcgcggcggg ccttggatcg aggcgacgcg
     2581 gccggaacag attgaactta ttgaccgcga atgaggccgt gcgtgaagcg cggtgtgacg
     2641 ggtgaggcgg tggccgagtt gaaaccaacg gaaggggcaa gccgccggct ggccggcgcg
     2701 gctttggccg ccgcggtgct gatgctcgcg gcgtgcaccg cttccgctcc gccggttgag
     2761 acgcaggcgt cgttgccgcc gccggcgatc aagccggccg aggtcgagat ctccccggcg
     2821 gcgctgcgcg agcatcagcg catcctcgcc gcctatggcg gcgtctacaa cgatccgcgg
     2881 ctgcaaggca tgctcgagca gaccgtcgat cgcctggtcg cggcgtcgga gcggcccgac
     2941 ctgcactacc gggtcaccat gctcaattcg cagtcgatca acgccttcgc cttgccaacc
     3001 gggcagctct acgtgacccg cggcctcatc gcgctcgcca acgacgagtc cgagctcgcc
     3061 tccgtcctcg cccacgagat ggggcacgtg ctcgcgcgcc acgccgccat ccgcgaagaa
     3121 caggcgcggc aggccgcctt ggtgaaccgc gtcgtcaccg acgtcatcag cgatccggaa
     3181 gtgggggcgc tggcgctcgc caagtcgaag ctggcgctgg ccggcttctc gcgcgcgcag
     3241 gaattcgaag ccgacgccat cggcatcggc gtcgccgcgc gcgccggcta cgacccctat
     3301 ggtgccgtgc gcttcctcac atcgatggag cacaattccg aactcaggcc gcagcagaac
     3361 ggcgccgcca tcaatccgcg cgcccccgac ttcctctcgt cgcatccggc gacgccggag
     3421 cggatcagca acgcgctcgc caacgcgcgc cagttcaacg ctccacagcc ctcgggcggt
     3481 ggacgcgaca aggctgcgta tctctccggc atcgacggaa tcgtgtttgg cgaggatccg
     3541 agcgaaggct tcgtgcgcgg ccggcgcttc ctgcatccgc ggctcggctt caccttcacc
     3601 gcgcccgacg gtttcagcct cgacaacacc gcgcaggccg tgctcggggt caagcatggc
     3661 ggcggccagg cgctacggct cgacgtcgtg cgcgtgcctg ccgaacagaa gctcgccgaa
     3721 tatctgacgt cgggctggat cgagcacatc gatcccggca ctgtcgagga ggtcaccatc
     3781 aacggctttc ccggcgccac ggcggccgcc aagggcgatc aatgggactt ccggctctac
     3841 gccgtccgct tcggcagcga cgtctatcgc ttcatattcg ccgcgaagca ccgcagcccc
     3901 gaaaccgacc gcatcttccg cgaatcgatc ggcacgttcc gccgcatgag cctcgccgag
     3961 atcgaggacg ccaagccgct gcgcctgcag gtggtgaccg tcgcgcccag cgacacggtc
     4021 gagaagctgg ccacccggat ggcggtcgcc gaccggccgg tggaacgctt ccgcgtactc
     4081 aacgggctcg atccggggga ccggctgaag tcgggcagcg aggtcaagat cgtcgttgaa
     4141 taacgctctg cggtcattcc gggttcgagc acagcgatcc ggaatgaaag acttgcgcct
     4201 cagaaattga tcgcgcgctt ggcgaccgcc agcgccgcct ccttgaccgc ctcgctcaag
     4261 gtcggatggg cgtggcaggt ccgcgcgatg tcctcggccg aggcgccgaa ctccatggcg
     4321 atcgccgcct cggcgatcat ggtctcggcg tctggcccga ggatatgcac gccgagaacg
     4381 cggtcggtct tggcgtcggc aaggatcttc acaaagccgt cggtcgcgag attggcccgg
     4441 gcgcgggcgt tggccgagaa cgggaatttg ccgacctgat agacgacgcc ggccgctttg
     4501 agctcctcct cggtcttgcc gaccgaggcg atctccggat gggtatagac gacgttggga
     4561 atgacctcgt agttcacgtg cccggcctgc ccggcaatca cctcggcggc ggcgacgcct
     4621 tcatcctcgg ccttgtgcgc cagcatcggg ccggcgatgg catcgccgat ggcgtagatg
     4681 ccgccgacgt tcgtgcgcaa atgcgcatcg accacgacgc ggccgcgatt gtcccggttc
     4741 acgccgaccg cttcgaggcc gaggccctcg gtgtagggga cgcggccgat cgcgaccagc
     4801 acgatgtcgg cctcgatcat ctccgcagcg ccgctcccgg ccgccggctc gactttcacc
     4861 tcaagcactt tgccggaagc gtctatcgcg gtgaccttcg acgagagctt gaacgcgagg
     4921 ccctgcttct gctgcaggcg atggaattgc cgcgcgacct cgctgtcgat gccgggcagg
     4981 atgtggtcga ggaattcgac
//
LOCUS       DATMQB010000155         5097 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_49966, whole genome shotgun sequence.
ACCESSION   DATMQB010000155 DATMQB010000000
VERSION     DATMQB010000155.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5097)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5097)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5097
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_49966"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            62..2332
                     /gene="ptsP"
                     /locus_tag="VNY79_04905"
     CDS             62..2332
                     /gene="ptsP"
                     /locus_tag="VNY79_04905"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HWX71816.1"
                     /translation="MRGALGGPRVLLRRLREVMAEQVSAQERLDKIVVLIAANMVAEV
                     CSVYVLRVDGTLELYATEGLNKEAVHQTVLRSDEGLVGLVASEANPINLSAAQNHPAF
                     SYRAETGEEIYHSFLGVPVLRAGNTLGVLVVQNRARRTYSEEEVEALQTTAMVLAEMI
                     ASGELSALAPPGAEPAARRSLHVKGTALSDGIALGHVVLHEPRVVVTNFIADDIPKEL
                     KHLESAVESLRTHLDELLEHGDVVEGGEHRDVLEAYRMFAYDRGWVHKLEEAVMTGLT
                     AEAAVERVQSDTRARMLRQTDPFLRERLHDLDDLANRLMRQLTGRDHAPSRESLPENA
                     ILVARSMGPAALLDYDRKRLRGLVLEEGGPHSHVAIVARALGVPAIGEIDNATGIADP
                     GDAIIVDGSVGDLHLRPLPDMEAAYVERVRLGARRQQQYQALRDLPCVTRDGEEVTLL
                     INAGLSVDLPHIADTGAAGIGLFRTELQFMVAPNFPRASEQYALYRAVIEAADGKPVT
                     FRTLDIGGDKVLPYMRNIEEENPALGWRAIRLGLDRPALLRTQLRALLRAGGGRALKI
                     MFPMIATVAEFDQAKDLVERELTHLRRHGHKLPDEVEVGSMVEVPSLLYQLDELLAHV
                     DFLSVGSNDLVQFLYAVDRGNPRVSGRFDPLSAPVLRALKDIADAGRKHRKPVTLCGE
                     LASQPLGALALVAIGYRALSLTPSAMGPVKAMLLDLDSRKAAAFLCAVMEKSAAGGVS
                     IRAQLEKFAADSGLQI"
     gene            2439..3515
                     /gene="prfA"
                     /locus_tag="VNY79_04910"
     CDS             2439..3515
                     /gene="prfA"
                     /locus_tag="VNY79_04910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016149 - translation release factor
                     activity, codon specific [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HWX71817.1"
                     /translation="MLPDQKLNALVVRHATLERDLAAALPPETFVKLSREFAELAPVV
                     EAVKSYRAAQRELEGLTSLIADPSTDAEMRSIAEAERPELEARRATLEHLLRLALIPK
                     DAMDDRNVILEIRAGTGGDEAALFAGDLFRMYERYAAKHGWKVEVMTLSEGSMGGFKE
                     IIAEIRGRGAFAKLKYESGVHRVQRVPDTEASGRIHTSTATVAVLPEAQEVDVPINDA
                     DLRIDTLRAGGAGGQHVNKTESAVRVTHIPSGIVVMMQEDRSQHRNRAKALAVLRTRL
                     YDLERQKLEAARAAERRGQVGTGDRSERIRTYNFPQGRVSEHRINLTLYKLPQIMEGE
                     ALGEIVDALVAEHQAAQLAAEDTG"
     gene            3584..4435
                     /gene="prmC"
                     /locus_tag="VNY79_04915"
     CDS             3584..4435
                     /gene="prmC"
                     /locus_tag="VNY79_04915"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015670111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0018364 - peptidyl-glutamine methylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HWX71818.1"
                     /translation="MRRSLARSFRAAGVDSPELDARVLVGHALGLDQAALAVAGARML
                     EREARDAIDALARRRFAREPVARIVGSKEFWSLKLSLTEATLVPRPESETVVEAALAA
                     IDAQGPRTRLRRIADLGTGSGALLLALMRELPGAFGVGTDTSPRALMVARANARRLGL
                     MPVAFIACDIAAALCGPFDLIVSNPPYIRSGDIDALAPEVRDFDPRTALDGGPDGLDC
                     FRAIAAAVPALLAPDGVLVVELGAGQAPAAAALFAAAGLAPWPPRTDLHGVPRALPAT
                     KRPRNRA"
     gene            4949..>5097
                     /locus_tag="VNY79_04920"
     CDS             4949..>5097
                     /locus_tag="VNY79_04920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4167 domain-containing protein"
                     /protein_id="HWX71819.1"
                     /translation="MRNGQNKRMRGRNRKGGHHQNPLSRMYESNGPDVKIRGTASHVA
                     EKYLQL"
BASE COUNT          855 a         1742 c         1713 g          787 t
ORIGIN      
        1 tgacttggtc gagccggggg ctgacaccct cggccggatg ggctgatccg aggatcacgt
       61 catgcgtggc gcactcggcg gtccgcgcgt gctgttgcgc cggctccgcg aagtgatggc
      121 ggagcaggtc agcgcgcagg aacgcctgga caagatcgtg gtgctgatcg ccgccaacat
      181 ggtggcggag gtctgctccg tctacgtgct gcgcgtggac ggcacgctcg agctttacgc
      241 caccgagggc ctcaacaagg aggcggtgca ccagaccgtg ctgcgctcgg acgaaggcct
      301 ggtcgggctg gtcgccagcg aggcgaaccc gatcaacctg tcggcggcgc agaaccatcc
      361 ggcgttctcc taccgggcgg agaccggcga ggagatctac cactccttcc tcggcgtgcc
      421 ggtcctgcgc gccggcaaca cgctcggcgt gctggtggtg cagaaccgcg cccggcgcac
      481 ctactccgag gaggaagtcg aggcgctgca gacgacggcg atggtgctcg cggagatgat
      541 cgcctccggc gagctttccg cgctggcgcc tccgggcgcc gagccggccg cgcggcgatc
      601 gctgcacgtc aagggcaccg cactctccga cggcatcgcg ctcggccacg tcgtgctgca
      661 cgagccgcgc gtcgtcgtca ccaatttcat cgccgacgac atcccgaagg aactcaagca
      721 cctcgaatcc gccgtcgaga gcctgcgcac ccatctcgac gagctcctcg agcacggcga
      781 cgtggtcgag ggcggcgagc accgcgatgt gctcgaagcc tatcgcatgt tcgcctacga
      841 ccgtggctgg gtgcacaagc tcgaggaagc ggtgatgacc ggcctcaccg ctgaggcggc
      901 ggtcgaacgc gtccagtccg acacgcgcgc gcgcatgctg cggcagaccg atccattcct
      961 gcgcgaacgc ctgcacgatc tcgacgacct cgccaaccgt ttgatgcgcc aattgaccgg
     1021 ccgcgatcac gcgccctcgc gcgagagcct gccggagaac gccattctcg tcgcgcgctc
     1081 gatgggaccc gcggcgctgc ttgactacga ccgcaagcga ctgcgcgggc tcgtgctcga
     1141 ggagggcggg ccgcattccc acgtcgccat cgtggcgcgg gcgctcggcg tgccggcgat
     1201 cggcgagatc gacaacgcta ctggtatcgc cgatccgggc gacgccatca tcgtcgacgg
     1261 ctcggtcggg gatctgcacc tgcggccgct gcctgacatg gaggccgcct acgtcgagcg
     1321 cgtgcggctg ggggcacggc gccagcagca ataccaggcg ctgcgcgatc ttccctgcgt
     1381 gaccagggac ggtgaagagg tcactctgct gatcaacgcc gggctcagcg tcgacctgcc
     1441 gcatatcgcc gataccgggg ccgcgggcat cggcctgttc cgcaccgagc tgcaattcat
     1501 ggtagcgccg aattttccgc gcgccagcga gcagtacgcg ctctatcgcg ccgtgatcga
     1561 ggccgccgac ggcaagccgg tgacgttccg caccctcgac atcggcggcg acaaggtgct
     1621 gccctacatg cgcaacatcg aagaggagaa tccggcgctc ggctggcgcg cgatccgcct
     1681 cgggctcgac cgaccggcct tgctgcgcac gcagctgcgc gcgctgctgc gcgccggcgg
     1741 cggccgcgcg ctgaagatca tgtttcccat gatcgcgact gtcgcggaat tcgaccaggc
     1801 gaaggacctg gtcgagcgcg agctcacgca cttgcgccgc cacggccaca agctgcccga
     1861 cgaggtcgag gtcggcagca tggtcgaggt gccttcgctg ctctaccagc tcgacgaact
     1921 gctcgcccat gtcgacttcc tctccgtcgg atcgaacgat ctggtgcaat tcctttatgc
     1981 cgtcgatcgc ggcaatccgc gcgtctccgg ccgcttcgac ccgctctcgg caccggtcct
     2041 gcgcgcgctc aaggacatcg ccgacgccgg ccgcaagcac cgcaagccgg tgacgctctg
     2101 cggcgagctc gcctcgcagc cgctcggcgc gcttgctctc gtcgccatcg gctaccgcgc
     2161 actgtcgctc acgccttccg cgatgggtcc ggtcaaggca atgctgctcg atctcgacag
     2221 ccgcaaggcc gccgcgttcc tctgcgcagt catggagaaa tcggcggccg gcggcgtctc
     2281 gatccgcgcg cagctggaaa aattcgccgc cgacagcggc ctgcagattt agggtactga
     2341 aaggtcgccg tgcctcgggc ttgttccggc ccggcgcctc ttctacttac cgtcacgaga
     2401 cgtgagtgcc cgacggcggg cacggcgatg cgaaggcgat gcttccagac cagaaactca
     2461 acgcgcttgt ggtccgccac gcgacgctcg agcgcgatct cgctgccgcg ctgccgcccg
     2521 agactttcgt gaagctctcg cgcgagttcg ccgaacttgc tcccgtggtc gaggcggtga
     2581 aatcctatcg ggcggcgcag cgcgagctcg agggactcac gagcctgatc gccgatccgt
     2641 cgaccgatgc ggaaatgcgc tccatcgccg aggccgagcg cccggaactc gaggcgcggc
     2701 gcgccacgct cgagcatcta ttgcggcttg cgctcatccc caaggacgca atggacgacc
     2761 gcaacgtcat cctggaaatc cgcgccggca ccggcggcga cgaggcggcg ctctttgccg
     2821 gcgatctgtt ccgcatgtac gagcgttacg ccgccaagca tggatggaag gtcgaagtca
     2881 tgaccttgag tgaaggctcg atgggcggct tcaaggagat catcgccgag atccgcggcc
     2941 gcggcgcctt cgccaagctc aaatacgaat ccggcgtgca ccgcgtgcag cgcgtgcccg
     3001 acaccgaggc gtccggccgc attcacacct cgaccgcgac ggtcgccgtg ttgcccgagg
     3061 cgcaggaggt cgacgttccg atcaacgatg cggacctgcg catcgatacc ttgcgcgccg
     3121 gcggcgccgg cggccagcac gtcaacaaga ccgaatcggc ggtgcgcgtg acccacattc
     3181 cctcgggcat cgtggtgatg atgcaggaag atcgctcgca gcatcgcaac cgcgccaagg
     3241 cgctcgccgt gctgcgcacg cggctctacg acctcgagcg gcagaagctg gaagccgcgc
     3301 gcgccgccga acgccgcggc caggtcggca ccggcgaccg ttccgaacgc atccgcacct
     3361 acaatttccc gcaaggccgc gtctccgaac atcgcatcaa tctcaccctc tacaagctgc
     3421 cgcagatcat ggagggcgag gcattgggcg agatcgtcga cgcgctcgtc gccgagcatc
     3481 aggccgcaca gctcgccgcc gaggacaccg gatgagatcg ccggccgctt tgtcagcaac
     3541 gcacgcacgc gacggcgaag caactgcgcc aacgattgcc gcggtgcgac gcagcttggc
     3601 acgaagcttc cgcgcagcgg gcgtcgactc acccgaactc gatgcgcgtg ttcttgtcgg
     3661 tcatgcgctt ggcctcgacc aggcggcgct cgcggtggct ggcgcgcgca tgctcgagcg
     3721 cgaggcgcgc gacgcgatcg atgcccttgc gcgccggcgc ttcgctcgcg aaccggtcgc
     3781 gcgcatcgtg ggcagcaagg aattctggag cctgaagctt tcgctcaccg aggcgacgct
     3841 ggtgccgcgg ccggagagcg aaacggtcgt cgaggcggcg ctcgccgcca tcgatgccca
     3901 gggcccacgc acgcgtctgc gccggatcgc cgatctcggt actgggagcg gtgcgctcct
     3961 tctcgcgctc atgcgcgaat tgccgggcgc gttcggagtc ggaaccgaca cgagcccgcg
     4021 cgcgctcatg gtcgcgcgcg cgaacgcgcg gcggctcggc ctgatgccgg tggcgttcat
     4081 cgcctgcgac atcgccgccg cgctctgcgg accgttcgac ctgatcgtgt ccaatccgcc
     4141 gtacatcaga tccggcgaca tcgatgcgct cgcccccgag gtgcgcgatt tcgatccgcg
     4201 cacggcgctc gatggcgggc ccgacgggct cgactgcttc cgcgcgattg ccgccgcagt
     4261 gccggcgctg ctcgcgcccg acggcgttct cgtcgtcgaa ctcggcgccg ggcaggcgcc
     4321 ggccgcggcc gcattgttcg cggcggcggg gcttgcgccg tggccgcccc gcaccgatct
     4381 tcatggggtg cctcgcgcgc tgcctgcgac aaaacggccg cgaaaccggg catgagcggc
     4441 aggcattgct tgagggaaaa ccgcagcaaa aaagcacttg gaatatccgc cggaaccgac
     4501 tagcttgcgc tcacggaatc ggcccgagat gatgccgcgc cgccttgaag gccaagggcg
     4561 cccctcttga gaggtcggcg gcgcagtgca ggtgaagagc gaaagccgta acagcgaagc
     4621 cggatcggga ctgcaaacgg gatcgccaca ttcagaccga gaaattttca tcggttcggc
     4681 gcgcattggt acgaaatgtc gcgcagatga cacagagttc gcagcgcccg cggtgagccg
     4741 ccggcgtcgg ttgggattgc tgagggttcg tgaggtcaca cgagcggctt ggagcggtga
     4801 agggccggta cgtcggccgc gcgcgctcgt ggagcaatcc atgcaggaag actgtatcgg
     4861 gtgatgggtc agggccgggt gaaattcggc gagttgaaac ggcggcatcc gtgccggcgc
     4921 agatgagggg ttggcaaaac agcaaaccat gagaaacggt cagaataagc gcatgcgggg
     4981 tcgcaaccgc aaaggtggtc atcaccagaa tccattatcg cgcatgtacg agtccaacgg
     5041 accggacgtg aagatcaggg gaacggcgtc ccacgtcgcc gaaaaatatc ttcagct
//
LOCUS       DATMQB010000156         2897 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2839282, whole genome shotgun sequence.
ACCESSION   DATMQB010000156 DATMQB010000000
VERSION     DATMQB010000156.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2897
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2839282"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..635)
                     /locus_tag="VNY79_04925"
     CDS             complement(<1..635)
                     /locus_tag="VNY79_04925"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX71820.1"
                     /translation="MSWRAVAAAALVTAAVCFLIARGNSYQTFIIVTVGLTAIVGTGL
                     NVLLGLSGQISLGHVAFYAIGAYAVSILTTAHDWPFWPALAVGGLVAGLAGVLLAIPA
                     LRVRGPYLAMVTIAFGFVVEQGAAEWQDLTGGWNGLSGIPGPAVFGAEIGEKGIGFLT
                     VALTGLSIAAFSRLSDSPWGNAMRAVRDSESASVSIGLDPTLIRTTAFGISA"
     gene            complement(632..1504)
                     /locus_tag="VNY79_04930"
     CDS             complement(632..1504)
                     /locus_tag="VNY79_04930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003598242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX71821.1"
                     /translation="MIASAIVSGLGLGSMYGLLALGFHVTHAVSRTVNFAQGSTMMLG
                     AVLCFTFWVTLGWPLALAVVLALAACALWGVVVERVAVRPFVARGSNSWLIATVALGI
                     VLENVVLFTFGKDPRGMPPGVLTTGSITIAGVRIQYLQALIPVIGLALAAGLQAFFAT
                     SRHGKALLAVVQNRDAARLMGIRVERVVEAAFALSGLLAGVAGILVAPLFTISSTMGT
                     LFGIKAFAVAILGGIESAGGVVLAGLIYGVAEALITALLGSTYTQIVTFALVILALAV
                     RPNGLFGRAELRKA"
     gene            complement(1686..2879)
                     /locus_tag="VNY79_04935"
     CDS             complement(1686..2879)
                     /locus_tag="VNY79_04935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015857664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX71822.1"
                     /translation="MSRGWQWQRARLARSLAIGAALAVLGAASAHAADPIKIGHVAAL
                     SGASAQSGEAITRGLSLAIDEINAKGGLLGGRMLELVQRDDESNPPKGLIAARELASA
                     DVVAVFGGIDTPVSLAMVPLLNKEKRIYMGVWAAGTGITRNGATPNYAFRVSAVDALV
                     DVRLLAYAHKKFAAKKAGLMLINNPWGQSNEKGLVAASKADASIEIAGIEKFENNDVD
                     MVPQLARLKDAGADAIILVVNAPPGAQVMKSRERMGWTAPVVSHWGISGGRFPELAGP
                     TAGEAHFIQTYSFFGKQGPAGQRVLAGLMKKYPQIKGPEDVFAPVGTANAYDAMHILA
                     LGIAQAGSTDADAIRMALEDLKTPYEGLIKTFARPFTAENHDALGADDYIMVHYEGDK
                     IVPAN"
BASE COUNT          525 a          987 c          957 g          428 t
ORIGIN      
        1 gccgagatgc cgaacgccgt cgtgcggatc agcgtcggat cgaggccgat cgaaacgctg
       61 gcggattccg aatctctcac cgcgcgcatt gcattgcccc aggggctgtc gctcagtcgg
      121 gaaaacgcgg cgatcgacaa accggtcagc gcgaccgtga gaaatccgat gcccttctcg
      181 ccgatctcgg ccccgaacac ggccgggccc ggaataccgg acagtccgtt ccagccgccg
      241 gtcagatcct gccactcggc cgcgccctgc tcgacgacga agccgaaggc gatggtcacc
      301 atggcgagat agggaccgcg cacccgcagc gccggaatag ccagcaggac gccggccagt
      361 ccggcgacga gcccgcccac cgcaagcgcc ggccagaacg gccaatcgtg cgcggtggtg
      421 aggatgctga cggcgtaggc gccgatggcg taaaacgcca cgtggccgag cgaaatctgg
      481 ccgctgagcc cgagcagcac gttgaggccg gtgccgacga tcgcggtcag cccgacggtg
      541 acgatgatga acgtctggta gctgttgccc ctggcgatga ggaagcacac cgcggcggtc
      601 acgagcgctg cggccgcgac ggcgcgccag ctcatgcctt cctcaattcg gcgcggccga
      661 acaggccgtt gggccgcacg gcgagagcga gaatgacgag cgcgaaggtg acgatctgcg
      721 tgtaggtcga gccgagaagc gcggtgatca gcgcctcggc gacgccgtag atgagcccgg
      781 ccagcaccac gcccccggcg ctttcgatgc cgccgaggat ggcgacggcg aaagccttga
      841 tgccgaacag cgtgcccatg gtggaggaaa tggtgaacag cggcgcgacc agaatgccgg
      901 cgacgccggc gagcaatccc gacagcgcaa acgccgcctc gaccacgcgc tcgacccgga
      961 tgcccatcaa ccgcgcggca tccctgttct gcaccacggc gagtagcgcc ttgccgtgcc
     1021 gtgacgttgc aaagaacgcc tgcagaccgg cggcgagcgc gaggccgatc accggaatca
     1081 gcgcctgcaa atattggatg cgcacgccag cgatagtgat gctgccggtc gtcagcacgc
     1141 ctggcggcat gccgcgcggg tccttgccga aggtgaacag cacgacgttc tcaaggacga
     1201 tgccgagcgc aacggtcgcg atcagccagg aattggagcc acgtgccacg aacgggcgca
     1261 ccgccacgcg ttccaccacg acgccccaca gcgcgcaggc cgcaagcgcc aggacgacgg
     1321 caagcgcgag cggccagccg agcgtgaccc agaaggtgaa gcacagcacc gcgccgagca
     1381 tcatggtgct gccctgggca aaattcacgg tccgcgacac cgcgtgagtg acgtgaaaac
     1441 ccagcgccag gagcccgtac atgctgccga ggccgaggcc ggagacgatc gcggacgcaa
     1501 tcagcatggt ggtttccgtg agacgcgtcc gagccttctt cgctcattcc cgcgaacggc
     1561 gacgcgggaa tccaattttc aggcgcggcc cccaaacaag cgatgagtcc cagcttgcgg
     1621 cgacgagcgg gaggtgaccg aaccggccga gcaacggaag cgggcgtccg cccgccgcca
     1681 tttcctcaat tcgccggaac gatcttgtcg ccttcgtagt ggaccatgat gtagtcgtca
     1741 gcaccgagcg catcatgatt ttccgcggtg aacggccgcg cgaaggtctt gatcagccct
     1801 tcgtagggcg tcttcaggtc ttcgagcgcc atgcggatcg catccgcgtc ggtcgagccg
     1861 gcctgggcga tgccgagcgc gagaatgtgc atggcatcgt aggcgttcgc cgtcccgacc
     1921 ggagcaaaca cgtcctcggg tcccttgatc tgcggatatt tcttcatgag gcccgccagc
     1981 acacgctggc cggccggccc ctgcttgccg aagaagctgt aggtctggat gaagtgcgct
     2041 tcgccggcgg tcggaccggc gagctccggg aagcgcccgc cggaaattcc ccaatgcgac
     2101 accaccggcg ccgtccagcc catacgctcg cgcgacttca tcacctgcgc gccgggcggt
     2161 gcattgacga cgaggatgat ggcgtcggcg ccggcgtcct tgagccgcgc caattgcggg
     2221 accatgtcga catcgttgtt ctcgaatttc tcgatgccgg cgatctcgat cgacgcgtcg
     2281 gccttgctcg cagccaccag gcccttctcg ttcgactggc cccagggatt gttgatgagc
     2341 atgagcccgg ccttcttcgc cgcgaatttc ttgtgcgcgt aggcaaggag ccgcacgtcg
     2401 accagggcat ccaccgccga gacgcgaaag gcgtagttgg gagtggcgcc gttgcgcgtg
     2461 atgccggtgc ccgcggccca cacgcccatg tagatgcgct tctccttgtt gagcagcggc
     2521 accatggcca gcgacaccgg cgtgtcgatg ccgccgaaga ccgccaccac gtcggccgag
     2581 gcgagttcgc gcgcggcgat caagcctttg ggcgggttcg actcgtcgtc gcgctgcacc
     2641 agttcgagca tgcggccgcc aaggagcccg cctttggcgt tgatctcgtc gatcgcgagc
     2701 gacaacccgc gcgtaatcgc ttcgccggat tgcgccgagg cgcccgagag cgccgccaca
     2761 tggccgatct tgatcgggtc ggcggcatgc gccgaagccg ccccgagtac cgccaacgcc
     2821 gcgccgatcg cgagcgaccg ggccaaccgg gcgcgctgcc actgccagcc tctgctcatt
     2881 gctttctcct gtcgccc
//
LOCUS       DATMQB010000157         2519 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1598766, whole genome shotgun sequence.
ACCESSION   DATMQB010000157 DATMQB010000000
VERSION     DATMQB010000157.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2519)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2519)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2519
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1598766"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..507)
                     /locus_tag="VNY79_04940"
     CDS             complement(<1..507)
                     /locus_tag="VNY79_04940"
                     /inference="COORDINATES: protein motif:HMM:NF023568.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HWX71823.1"
                     /translation="MIVLAWIIVITFVLLALAVGALAVSNARTARQVEKALPPLGRFI
                     DIDGSRIHYLDRGSGPTILCIHRLAGQMRHFTYALLDKLKSDYRVVIVDRPGSGYSTR
                     PPQASAAIFAQARTLAKFAAALRLQRPLVVGHSLGGAIALALALNHPEQVGGLALLAP
                     LTHPQDELS"
     gene            complement(564..1472)
                     /locus_tag="VNY79_04945"
     CDS             complement(564..1472)
                     /locus_tag="VNY79_04945"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX71824.1"
                     /translation="MLKLEGRTAVVTGAASGIGRAIATSLARRGCHLALADIDDDGLQ
                     HTAAEIIAAGVRISRHHLDVSDAGAVAAFPPRVMAEHPGVDILVNNAGVALGGAFEQV
                     ADADFDWLFAINFWGVVRMTRAFLPLLHKSEEARIVNISSAFGLIAPPGQTAYSASKF
                     AVRGFSESLRHELARTNIGVTVVHPGGVATSISESARMAQSISEEEVAERRERAKAFL
                     RLPPEVAGEVIVRGIENRRARVLVGADAKRMAIVERLMPVTYWNLLGRAFRRCVSIGT
                     PEGRHPRHHRKVEICLPKGHASLWKT"
     gene            complement(1516..>2519)
                     /locus_tag="VNY79_04950"
     CDS             complement(1516..>2519)
                     /locus_tag="VNY79_04950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HWX71825.1"
                     /translation="ALQSLAEGLFPPDGIYLHAPPMFHIANGWCMYCTLLNGGTSVVI
                     KGFAPETVAQAIERFRITNTLLVPTMIQMFVDHPGIDRYDLSSLRQILYGASPISEAL
                     LDRAMARLPGVRFIQAYGMTELSPLATVLATEEQIGAGRAKGRHRSGGRAALGVEVRI
                     VDANDQPVPPGTIGEIAVRGDNLMLGYWNRPDDTARAIIDGWMHTGDGGYMDADGFVY
                     IVDRIKDMIITGGENVYSTEVENVVAQYPGVLQCAVIGIPHPQWGEAVHAVVVVKEGA
                     SFDPADLIGFCKERIGGYKCPRSVDVHTEPLPMSGAGKILKRELRRPFWENQDRRVA"
BASE COUNT          438 a          816 c          828 g          437 t
ORIGIN      
        1 cgacagttca tcctgcgggt gcgtcaaggg cgccagaaga gcgagcccgc ccacttgctc
       61 cggatggttc aaggccagcg ccaacgcgat ggcgccgccc aatgaatggc cgacgacgag
      121 cggccgctgc aggcgaagcg ctgcggcgaa tttcgcgagc gtgcgcgcct gggcgaagat
      181 cgcggccgat gcctgcggcg gccgcgtgga atagccgctg ccgggccggt ccacgatcac
      241 gacccgatag tcgctcttga gcttgtcgag cagcgcatag gtgaagtgac gcatctggcc
      301 ggccagcctg tgaatgcaga ggatggtcgg gccggaaccc cggtcgaggt agtggatgcg
      361 cgaaccgtcg atgtcgatga agcgcccgag cggcggcaac gccttctcga cctgccgtgc
      421 cgtgcgtgca ttggagacgg cgagcgctcc gaccgccaag gcgagaagta cgaaggtaat
      481 gacgatgatc cacgccaaga cgatcatgtc cgtgtctcct ctgcggtgcc gagcgcgatc
      541 gtttcagggc tcaacgattg cgctcaggtc ttccataagg aagcatgacc tttcggcaaa
      601 caaatttcca ctttccggtg atgcctggga tgccggcctt ctggcgtgcc gatcgataca
      661 catctcctaa acgcgcgtcc aagcaaattc cagtaagtga ccggcatcag acgctcgacg
      721 atggccatcc tcttggcgtc ggcgccgacc aggacccgcg cccggcggtt ttcgatgccg
      781 cggacgatca cttcgccggc gacctccggc ggcagccgca ggaacgcctt ggcccgctcg
      841 cgtcgttccg cgacctcctc ctcggagatg ctttgcgcca tccgtgcgct ctccgagatc
      901 gaggtggcga cgccgccggg atggacgacg gtcacgccga tgttggtgcg cgcgagttcg
      961 tggcgcaggg attcggaaaa accgcgcacg gcgaacttgc tcgccgagta ggcggtctgg
     1021 ccgggcgggg cgatcaggcc gaatgcgctg gagatgttga cgatgcgcgc ctcctcgctc
     1081 ttgtgcagga gcgggaggaa ggcgcgtgtc atccgtacga cgccccaaaa attgatcgcg
     1141 aacagccagt cgaagtcagc gtccgcgacc tgctcgaacg cgccgccgag cgccacgccg
     1201 gcattgttga cgagaatatc gacgcccggg tgctcggcca tcacccgcgg cgggaacgca
     1261 gcgaccgccc cggcatccga tacatcgaga tgatgccggc tgatgcgcac ccctgcggcg
     1321 atgatttccg cagcggtgtg ctgcaggccg tcatcgtcga tgtcggccag cgcaagatgg
     1381 cagccgcgcc ttgcgagcga ggtcgcgatc gcccgcccga tccccgaggc tgcccccgtc
     1441 acgacggccg tgcggccctc tagtttcagc aacgtcgcgc tctcttttta agctcgtcgg
     1501 ccaagtctgt gcgctttagg cgacgcgccg gtcctgattt tcccaaaacg gacggcgcag
     1561 ttcgcgcttg agaatcttgc cggcgccgga catcggcaag ggttcggtgt gcacatcgac
     1621 gctgcgcgga catttgtagc cgccaatgcg ttctttgcag aaaccgatca gatccgccgg
     1681 atcgaagctg gcgccctcct tgaccaccac caccgcgtgg accgcttcac cccactgcgg
     1741 atgcggaatg ccgatcaccg cgcattgcag gaccccgggg tattgggcga ccacgttctc
     1801 tacttcggta gagtagacgt tctcgccgcc agttatgatc atgtccttga tgcggtcgac
     1861 gatgtagacg aagccgtcgg cgtccatgta gccgccgtcg ccggtgtgca tccaaccgtc
     1921 gatgatcgcc ctggccgtat cgtctggccg gttccagtag ccgagcatga ggttgtcgcc
     1981 gcgcaccgcg atctcgccga tcgttcccgg cggcaccggc tggtcgttcg catcgacaat
     2041 ccgcacctcg acgccaagcg cggcgcggcc gccagaacgg tggcggccct tggcccggcc
     2101 ggcgccgatc tgctcctcgg tcgcgagcac ggtcgcgagc ggcgatagtt cggtcatccc
     2161 gtaggcctgg atgaaacgca cgccgggaag gcgcgccatg gcgcggtcga gcagcgcctc
     2221 cgagatcggc gaggcgccgt aaaggatctg ccgcagcgag gagagatcgt atctgtcgat
     2281 gccgggatga tcgacgaaca tttggatcat ggtcggcacg agcagcgtat tggtaatccg
     2341 gaagcgctcg atcgcctgcg cgacagtctc cggtgcgaag cccttgatga ccacgctggt
     2401 gccgccgttg agcagcgtgc agtacatgca ccagccgttg gcgatgtgaa acatcggcgg
     2461 cgcatgcaga tagattccgt cgggcgggaa cagcccctcg gccaggcttt gcagcgcgg
//
LOCUS       DATMQB010000158         3212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_357042, whole genome shotgun sequence.
ACCESSION   DATMQB010000158 DATMQB010000000
VERSION     DATMQB010000158.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3212
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_357042"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..729)
                     /locus_tag="VNY79_04955"
     CDS             complement(<1..729)
                     /locus_tag="VNY79_04955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006932632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HWX71826.1"
                     /translation="MTLPLSGLLVVSLEQAVAAPMCTCRLADAGARVIKIERPEGDFA
                     RSYDDFAHGESSYFVWLNRGKESVVLDLAKAGDKALLEAMLGHADIFVQNLKPGTVGK
                     LGFSVARLRHDYPRLICCSISGFGESGPFAGRKAYDLLIQAEVGLASITGTTEPSRVG
                     VSAVDVTTGLNAYEAILEALLARRRSGEGAALSVSLFDAMADWMAVPLMQQEAGKPPQ
                     RVGLTHASIAPYGAFPTRDGANILI"
     gene            complement(762..1919)
                     /locus_tag="VNY79_04960"
     CDS             complement(762..1919)
                     /locus_tag="VNY79_04960"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX71827.1"
                     /translation="MTEVADLAPIREAVRALCANFPGAYWRALDRERAYPTEFVAALT
                     KAGFLAALIPEQYGGSGLPMSAAAAILEEIHASGCNGAACHAQMYTMGTVLRHGSAEQ
                     KERYLPAIARGELRLQAFGVTEPTSGTDTLGLRTTATHDGDHYIVNGQKIWTSRAEHS
                     DLMLLLARTAPREQAASRTAGLSVFLVDMREVKGNGLTIRPIRTMMNHGTTEIFLENM
                     RVPADSLIGNEGEGFRYILSGMNAERILIAGESIGDAKWFIGKATAYARERVVFGRPI
                     GQNQGVQFPIARAYMAMRAAELMVREAAALYEAGKDCGAEANMAKQLAAEASWEAADM
                     CVQTHGGFGFAEEFDVERKFREARLYRVAPISTNLVLSYLAEHVLGLPRSY"
     gene            complement(1916..2770)
                     /locus_tag="VNY79_04965"
     CDS             complement(1916..2770)
                     /locus_tag="VNY79_04965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HWX71828.1"
                     /translation="MTIVYEKVMALKVPPVEVNYGPKDCMLYALGVGLAQDPMNEDEL
                     AFVYEKNLKVLPTMATVLGYGVSWAREAGIDQLRVVNGEQGFTLHKPLEPEATVVGHS
                     RIIEVIDKGAGKGALILSERKVSDKASGELIATITQTAFCRGDGGFGGPPRQAPAPHP
                     IPERAPDMFCDLPTRPEMALIYRLSGDYNPLHAEPAFAKAAGFERPILHGLGTFGVSG
                     HAVLKTLCGYDPNRLAAFAGRFSAPVFPGETIRTEMWLDGAMVSFRARVLERDVIAIN
                     NGRAEIRP"
     gene            complement(2849..>3212)
                     /locus_tag="VNY79_04970"
     CDS             complement(2849..>3212)
                     /locus_tag="VNY79_04970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX71829.1"
                     /translation="RFNVRSNCVSPFAWTRMVQSIPAEDEAQKERLARAAQVTPEKVA
                     PLVVYLASDRADGVTGQILSARNNEIYLFNQNRPVRTLHRSDGWTPQKLAEQLKPAFA
                     NSFTPLERSPEVFSWDPV"
BASE COUNT          514 a         1040 c         1111 g          547 t
ORIGIN      
        1 gatgaggata ttggcgccgt cacgcgtcgg gaatgcgccg tagggcgcga tcgaggcatg
       61 ggtgagcccg acgcgctgcg gcggcttgcc cgcttcctgc tgcatcagcg gcaccgccat
      121 ccagtcggcc atggcgtcga acagcgatac cgaaagcgcg gcaccctcgc cgctgcgccg
      181 ccgcgccagc agagcttcca ggatcgcctc gtacgcattc agcccggtgg tgacgtcgac
      241 ggccgatacg ccgacgcgcg acggctccgt cgtgccggtg atcgaggcga gcccgacttc
      301 ggcctgaatg agcaaatcgt aggccttgcg cccagcaaac ggaccgctct cgccgaagcc
      361 ggagatcgag cagcagatga ggcgcggata gtcgtgccgc agccgcgcaa cggaaaatcc
      421 gagcttccct accgtccctg gcttgaggtt ctgcacgaag atgtcggcgt gcccgagcat
      481 tgcttcgagc agcgccttgt cgccggcctt ggcgaggtcg agcaccaccg attccttgcc
      541 gcggttgagc cagacgaaat agctgctctc gccgtgcgcg aagtcgtcgt aggagcgggc
      601 aaagtcgcct tccggccgct cgatcttgat cacgcgcgcc ccggcatccg cgagccggca
      661 tgtgcacatc ggcgcggcga cggcctgttc gagcgagacg acgagaagtc cggacaaggg
      721 cagggtcatg gtttcttata ttcgcgccgg cgccggccgt ttcaatacga ccgcggcagg
      781 ccgagcacgt gctcggcgag atacgacaag acgagattgg tggaaatcgg cgccacgcga
      841 taaagccttg cctcgcggaa ttttcgctcg acgtcgaatt cttcggcaaa gccgaagccg
      901 ccatgggtct gcacgcacat gtcggccgcc tcccaggacg cttcggcggc gagttgtttc
      961 gccatgttcg cctcggcgcc gcaatccttg cccgcttcgt agagcgccgc cgcctcgcgc
     1021 accatcagtt cggccgcgcg catcgccata taggcgcgcg cgatcggaaa ctgcacgcct
     1081 tggttctgcc cgatcggccg gccgaacacc acgcgctcgc gcgcgtaggc tgtggccttg
     1141 ccgatgaacc atttggcgtc gccgatgctt tcgccggcga tgagaatgcg ctcggcgttc
     1201 atgccggaga ggatgtagcg gaagccctcg ccttcgttgc cgatgaggct gtcggcgggc
     1261 acccgcatgt tctcgaggaa gatttcggtc gtgccgtgat tcatcatcgt gcggatgggc
     1321 ctgatggtca ggccgttgcc cttcacctcg cgcatgtcga cgagaaacac ggagaggccc
     1381 gcggtgcgcg acgccgcctg ttcgcgcggc gcggtgcggg cgagcagcag catgaggtcg
     1441 gaatgctcgg cgcgcgaggt ccagattttc tggccgttga cgatgtagtg atcgccgtcg
     1501 tgggtcgccg tggtgcgcag gcccagcgtg tcagtgccgg aggtcggttc ggtgacgccg
     1561 aacgcctgca gccgcagctc gccgcgcgcg atggccggca ggtagcgctc cttctgttcc
     1621 gcgctgccat ggcgcagcac ggttcccatc gtgtacatct gcgcgtggca ggcggcaccg
     1681 ttgcagcccg aggcgtggat ctcctcaagg atggcggccg cggcgctcat ggggaggccg
     1741 ctgccgccgt attgctccgg gatgagcgcg gcgagaaaac cggccttggt caaggccgcc
     1801 acgaactcgg tcggataggc gcgctcacgg tcgagggcgc gccagtacgc gcccgggaag
     1861 ttggcgcaca gggcgcgcac ggcctcgcgg atcggcgcga ggtcggcaac ttcggtcacg
     1921 gcctgatctc cgcgcggccg ttgttgatgg cgatcacgtc acgttcgaga acgcgcgcgc
     1981 gaaagctcac catggcgccg tccaaccaca tctcggtgcg gatcgtctcg ccgggaaaca
     2041 ccggcgcgga gaagcggccg gcgaaagccg cgaggcggtt cgggtcgtaa ccgcacagcg
     2101 tcttgagcac cgcgtgcccg gaaacgccga aagtgccgag gccgtgcagg atcgggcgtt
     2161 cgaatccggc ggccttggcg aacgcgggct cggcgtgcag cgggttgtag tcgccgctca
     2221 ggcggtagat cagcgccatc tccgggcgcg tcggcagatc gcaaaacata tcgggagccc
     2281 gctccgggat cggatgcggc gccggcgcct gccgcggcgg tccgccgaag ccgccgtcgc
     2341 cgcggcagaa cgcggtctgc gtgatcgtgg cgatcagttc accgctcgcc ttgtcgctca
     2401 ccttgcgttc gctgaggatg agtgcgccct tgccggcgcc cttgtcgatg acctcgatga
     2461 tgcgcgagtg gccgacgaca gtcgcctccg gctcgagcgg cttgtgcagc gtaaaccctt
     2521 gctcgccgtt gacgacgcgc aactgatcga tgccggcctc gcgcgcccag gatacgccat
     2581 agccgagcac ggtcgccatg gtcgggagca ccttgagatt cttctcgtac acgaaggcga
     2641 gttcgtcctc gttcattggg tcctgcgcga gcccgacgcc gagcgcgtag agcatgcagt
     2701 ccttgggacc gtagttcacc tcgaccggcg gcaccttgag cgccattacc ttttcataga
     2761 cgatggtcat ggactgtctt tccgtcctat cgcgacatcc tcaggggcgc gccgcaggtg
     2821 cgccgcgaag gacgacggcg aacagctatc acaccgggtc ccaggaaaaa acttcgggcg
     2881 agcgctccag cggcgtgaag gagttggcga aggcgggctt gagctgctcg gcgagcttct
     2941 gcggcgtcca gccgtcggag cggtgcaggg tgcggaccgg ccggttctga ttgaacaggt
     3001 agatctcgtt gttgcgcgcc gagaggattt gtccggtgac gccgtcggcg cggtcggagg
     3061 cgagatagac gacgagcgga gcgaccttct ccggcgtcac ttgggcagcg cgggcgaggc
     3121 gctccttctg cgcctcgtcc tcggcgggga tcgattgcac catgcgcgtc caggcgaacg
     3181 gcgacacgca attcgagcgc acgttgaagc gc
//
LOCUS       DATMQB010000159         2911 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_357083, whole genome shotgun sequence.
ACCESSION   DATMQB010000159 DATMQB010000000
VERSION     DATMQB010000159.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2911)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2911)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2911
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_357083"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            68..>2911
                     /locus_tag="VNY79_04975"
     CDS             68..>2911
                     /locus_tag="VNY79_04975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018268415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HWX71830.1"
                     /translation="MWIVQIALRRPYTFVVFALLIAIFGVLAARRTPVDIFPNINVPV
                     VSVVWTYNGLPPNDMSGRVIYFYERYLTAQVGDIQHIESQSLSGYGVVKIFFQKDVNI
                     AAALAQVTAASQTVLKLLPPGITPPYVLSYNASSVPILQLALSSKKLPQMQLFDLGQN
                     FIRPQLATVAGAAVPSPYGGKVLQVQVDLDQQTMQAHNVSADDVLNAVSAQNLILPAG
                     DEKLGKFDWNVALNASPVLLERINDLPVKKVNGTIIYMHDVAYVHQGSPPQTNLVRVN
                     GSRAVLMTILKAGAASTLSVIDGIKSLLPRVEESLPPSLNLSAVGDQSIFVKAAVFGV
                     IREAALAAALVGLMILIFLGSWRSTVIILIEIPLAILFSLAALSWLGETINVMTLGGL
                     ALAVGILVDDGTVTIENINYHLEQGKEIEPAIMDGAQQIVIPAFVTLLCLCIVFVPMF
                     QLGGVAGYLFRPLAEAVVFALVGSFLLSRTLVPTMAHYLMRGHHAGSGHASPGASAPP
                     PRRWRNPLKSFQRWFDDGFARVRAHYRALLSLALGFPKTFIAGFLACIVVSFGLWPFL
                     GQNFFPAVDSGQILMHVRAQSGTRIEETARLFDLVEQTIRQTIPPHQLDNIVDNIGLP
                     FSGINMAYQNTGTIGPADGDALISLKEGHRPTEDFVRELRTLLPQKFPGTTFSFLPAD
                     IVSQILNFGLPAPIDVQVIGNNQPANYAYATDLLKRIRTVTGIADARIQQVFNYPQIN
                     VDVDRTLAGQVGLTQRDVANNLLITLSGSQQVRPNFWLNPANGVSYPIVAQMPQYRVD
                     TLSDLVNMPITSGDTKAPQYLGGLATMTPGPSPGVVSHYNVQPVIDIYGAVQGRDLGA
                     VSADIDSILQETRKDVPRGSQVAIGGQVQTMASAYSQLYFGLAGAIVLIYLVIVVNFQ
                     SWLDPFIIITALPAALAGIVWMLFMTGTTLSVPA"
BASE COUNT          472 a         1045 c          865 g          529 t
ORIGIN      
        1 ttggagcacg ggcgcgactg gcggccgggg ccgcggcggc atcgcgttcc cccgggagac
       61 ggctgacgtg tggatcgtac aaatcgccct gcggcggccc tacacctttg tcgtcttcgc
      121 cctgctcatc gccatcttcg gcgtgctcgc cgcgcggcgc accccggtcg acatcttccc
      181 caacatcaac gtcccggtcg tcagcgtggt ctggacctac aacgggcttc cgccgaacga
      241 catgtccggg cgcgtcatct acttctatga gcgctacctg accgcgcagg tcggcgacat
      301 ccagcacatc gaatcgcagt cgctgagcgg ctacggcgtg gtcaagatct tcttccagaa
      361 ggacgtgaac atcgccgcgg cgctggcgca ggtgacggcg gcctcgcaga ccgtgctcaa
      421 gctgctgccg cccggcatca ccccgccgta tgtgctcagc tataacgctt cgagcgtgcc
      481 gatcctgcag ctcgctttgt cgagcaagaa gctgccgcag atgcagctct tcgacctcgg
      541 ccagaacttc atccggccgc agctcgcgac cgtcgccggc gccgctgtgc cttcgcccta
      601 cggcggcaag gttctgcagg tgcaggtcga cctcgaccag cagacgatgc aggcccacaa
      661 cgtctccgcc gacgacgtgc tcaacgccgt ttccgcgcag aacctgatcc tgccggccgg
      721 cgacgagaag ctcggcaagt tcgactggaa cgtcgcgctc aacgccagcc cggtcctgct
      781 cgaacggatc aacgacctgc cggtgaagaa ggtcaacggc accatcatct acatgcatga
      841 cgtcgcctac gtgcatcagg gctcgccgcc gcagaccaac ctggtgcgcg tcaacggctc
      901 gcgcgcggtg ctgatgacga tcctcaaagc cggcgccgct tcgacgctca gcgtcatcga
      961 cggcatcaag tcgctgctgc cgcgggtcga ggagagcctg ccgccgagcc tcaacctcag
     1021 cgccgtcggc gaccagtcga tcttcgtcaa ggctgcggtg ttcggcgtca tccgcgaggc
     1081 ggcgctcgcc gccgcgctgg tcgggctgat gatcctcatc ttcctcggca gctggcgctc
     1141 gacggtcatc atcctcatcg agatcccgct cgccatcctg ttctcgctcg ccgcgctgtc
     1201 ctggctcggc gagacgatca acgtgatgac gctcggcggc ctggcgctcg ccgtcggcat
     1261 cctggtcgac gacggcaccg tcaccatcga gaacatcaac taccacctcg aacagggaaa
     1321 agagatcgag ccggcgatca tggacggggc gcagcagatc gtgatccccg ccttcgtcac
     1381 gctgctttgc ctgtgcatcg tgttcgtgcc gatgttccag ctcggcggcg tcgccggcta
     1441 cctgttccgg ccgctcgccg aggcggtggt gttcgcgctt gtcggctcgt ttctgctgtc
     1501 gcgcacgctg gtcccgacta tggcccatta tctcatgcgc ggccatcatg ccggcagcgg
     1561 ccatgcttcg cccggcgcgt cggcaccgcc gccgcgccgc tggcgcaatc cgctcaagag
     1621 cttccagcga tggttcgacg atggcttcgc gcgcgtgcgg gcgcactacc gcgcgctgct
     1681 gtcgctcgca ctcggctttc ccaagacctt catagccggg ttcctcgcct gcatcgtcgt
     1741 ttccttcggc ctgtggccgt tcctcggaca gaacttcttc ccggcggtcg attccgggca
     1801 gattctgatg cacgtccgcg cccagtccgg cacccgcatc gaggagaccg cgcggctgtt
     1861 cgatctcgtc gagcagacga tccgccagac catcccgccc catcagcttg ataacatcgt
     1921 cgacaatatc ggcctgccgt tttccggcat caacatggcc taccagaaca ccggcacgat
     1981 cggaccggcc gacggcgacg ccctgatcag cctcaaggaa ggccatcggc cgaccgagga
     2041 cttcgtgcgg gagctgcgca ccctgttgcc gcagaaattt cccggcacga ccttctcgtt
     2101 cctgcccgcg gacatcgtgt cgcagattct caatttcggc ctgccggcgc cgatcgacgt
     2161 gcaggtcatc ggcaacaatc agcccgccaa ctacgcctac gccaccgatc tgctcaagcg
     2221 catccgcacc gtcaccggca tcgccgacgc gcgcatccaa caggtgttca actatccgca
     2281 gatcaacgtc gacgtcgatc gcaccctcgc cggccaggtc gggctgacgc agcgcgacgt
     2341 cgccaacaat ctgttgatca cgctctcggg cagccaacag gtcaggccga atttctggct
     2401 caacccggcg aacggcgtct cctatccgat cgtcgcgcag atgccgcaat accgggtcga
     2461 caccttgtcc gaccttgtca acatgccgat cacttcgggg gacaccaagg cgccgcaata
     2521 cctcggcggc ctcgcgacca tgacgccggg cccaagtccc ggggtggtct cgcactacaa
     2581 cgtgcagccg gtgatcgaca tctacggcgc ggtgcagggc cgcgacctcg gcgcggtgtc
     2641 ggccgacatc gacagcatct tgcaggagac gcgcaaggac gtgccgcgcg gctcccaagt
     2701 cgcgatcggc gggcaggtgc agaccatggc gagcgcttac agtcagctct atttcgggct
     2761 cgccggcgcc atcgtgctca tctatctggt gatcgtggtc aatttccagt cgtggcttga
     2821 ccccttcatc atcatcacgg cgctgccggc ggcgctcgcc ggcatcgtct ggatgctgtt
     2881 catgaccggc acgacgctgt cggtcccggc g
//
LOCUS       DATMQB010000160         3654 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2220605, whole genome shotgun sequence.
ACCESSION   DATMQB010000160 DATMQB010000000
VERSION     DATMQB010000160.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3654)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3654)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3654
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2220605"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..613
                     /locus_tag="VNY79_04980"
     CDS             <1..613
                     /locus_tag="VNY79_04980"
                     /inference="COORDINATES: protein motif:HMM:NF027681.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HWX71831.1"
                     /translation="YQTPPKVPTDEAAPLAVPDPLNPRYSYGAGKLISEIMAINFGRK
                     FFDRVLIFRPHNVYGPDMGFEHVIPQFALRLHALAARQPAGRLPFAIQGTGAETRSFC
                     FIDDLVAGILVMRERGEHLGIYHVGTMEEVTIADLARRVARAAGREIELVPGEAAAGG
                     TPRRCPDISKLARLSYKPRVPLDEGLKPTLDWYWRNADLAPKT"
     gene            641..1921
                     /locus_tag="VNY79_04985"
     CDS             641..1921
                     /locus_tag="VNY79_04985"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF020073.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HWX71832.1"
                     /translation="MRPSKVARASGTGASVPVECCQVCGHAPLDDVLSLGYMPPVNQM
                     VRIGAVPRQQPWFPTNLLHCRNCELVQLGLAVDPVIIFPPDYPYTSGTTKLLRDNFAD
                     LAREAAAMLGLGKDDLVVDIGSNDGTLLSNFKDAGHRALGIEPTDVGAIANQRGIPTL
                     KRYFGPEVAREVKRAHGPAALVTAANCFAHIEDVHAIVDAIGEMLRPDGVFISESHYL
                     MGLLDTLQYDTIYHEHLRYYSLASLKHLLEMHGLEVFHARPIPSHGGSIRVYAARHGT
                     HAVQHSVGDMLAAEPRGAAMAERLASFRHDVVLSKLRLLAMLRDFKEKGARIAGISAP
                     SRASTLVNYVGLDEAIIDYVCEIPGSLKIGRYMPGTRIPVVDEARLYSDQPDYAVIFS
                     WHIADELAPKVKAKGFRGQIITPLPVPRVVQAAP"
     gene            1918..2658
                     /locus_tag="VNY79_04990"
     CDS             1918..2658
                     /locus_tag="VNY79_04990"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF024880.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HWX71833.1"
                     /translation="MSIDGVQDKQKEIAFFDAHAVSDEYDVFTPEASARLISAYVRLS
                     GLPRGARVADLGCGSGVFTDLLRRAGYSGIGLDISPKLVALGRSKHPGLELIEGDAEN
                     LPFGNASFDGVLLSGLVHHFPDPRRLAAEVCRVLKTGGRFVAFDPNRMNPFMWLYRDR
                     ASPFYSPVGVTENERPILASRVAAVFRNEGFRVQTDYLAGLAYRYVASPATRTLLPIY
                     NFIDATLFGLAIMRPFRPFVLTSGEKLT"
     gene            2655..>3654
                     /locus_tag="VNY79_04995"
     CDS             2655..>3654
                     /locus_tag="VNY79_04995"
                     /inference="COORDINATES: protein motif:HMM:TIGR03026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003979 - UDP-glucose 6-dehydrogenase
                     activity [Evidence IEA];
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0000271 - polysaccharide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide sugar dehydrogenase"
                     /protein_id="HWX71834.1"
                     /translation="MTVRPKISAADAPTTVENAEVTVVGGAGHVGVPLVLALAEAGLR
                     VNINDLNKESLEALRAGRLPFIEHGAANVLSQALTSRRLVFTHSSDRISGDGPVIITI
                     GTPIDEFLNPVRKVVQDCVDALLPSLADGQLVVLRSTVFPGTTDWLASYLHAKGRRLK
                     VAFCPERVVQGNGLKELRDMPQIVSGTTPDAEREAAALFERIAPEVVVVSPIEAEFAK
                     LFSNAYRYIEFAATNEFYLVAKSAGVDYQRVLKAMTHNYPRLKGMPRPGFAAGPCLVK
                     DTMQLSAFARNQFGLGHAALLINEGLVLHVVDDIKRRYDLANTSVGLLGMAFKAESD"
BASE COUNT          615 a         1279 c         1138 g          622 t
ORIGIN      
        1 ttatcagacc ccgccgaaag tcccgaccga cgaggccgcc ccgctcgccg tgcccgatcc
       61 gctcaacccg cgctattcct atggcgccgg caagctcatc agcgagatca tggcgatcaa
      121 tttcggccgc aaattcttcg atcgcgtact gatcttccgc ccgcacaacg tctatggtcc
      181 cgacatgggg ttcgagcacg tgatcccgca gttcgcgctg cgcctgcatg cgctggcggc
      241 gcggcagccc gccggtcggc tccctttcgc catccagggc accggcgcgg aaacccgcag
      301 cttctgcttc atcgacgatc tcgtcgccgg catcctggtg atgcgcgaaa gaggcgagca
      361 tctcggcatc tatcacgtcg gcacgatgga agaggtgacg atcgcggacc ttgcgcgccg
      421 cgtcgcgcgc gcggccggac gcgagatcga gttggttccc ggcgaggctg ccgcgggggg
      481 aacaccgcgg cgctgtcccg acatttcgaa gctcgcccgg ctgagttata agccgcgcgt
      541 gccgctcgac gaaggcctca agccgacgct cgactggtac tggcgcaacg ccgacctggc
      601 gcccaaaacc tgagcgcggc gacgacacgg agaccacgtt ttgcgtccta gcaaagtcgc
      661 gcgcgcctcc ggcaccggcg ccagcgtccc ggtcgagtgc tgtcaggtat gcggccacgc
      721 cccgctcgat gacgtgctct cgctcggcta catgccgccg gtcaaccaga tggtgcggat
      781 cggcgccgtg ccgcggcagc aaccgtggtt ccccaccaac ctgctccact gccgcaactg
      841 cgagctggtg cagctcggcc tcgcggtcga tccggtcatc atctttccgc cggactatcc
      901 ctacaccagc ggcacgacga agctgctgcg cgacaacttc gccgatctcg cccgcgaagc
      961 cgcggcgatg ctgggactgg ggaaggacga tctcgtggtc gatatcggct ccaatgacgg
     1021 cacgctgctg tcgaacttca aggacgccgg ccaccgcgcg ctcggcatcg agccgaccga
     1081 cgtcggcgcc atcgccaacc agcgcggcat tcccaccctc aagcgctatt tcgggcccga
     1141 ggtggcgcgc gaggtcaagc gcgcgcacgg tccggccgcc ttggtcaccg ccgccaactg
     1201 ctttgcccat atcgaggacg tgcatgcgat tgtcgacgcc atcggggaaa tgctgcgacc
     1261 cgacggcgtg ttcatttccg aatcgcacta tctcatgggc ctcctcgata cgctgcaata
     1321 tgacacgatc tatcacgagc atctgcgcta ctattcgctg gcgagcctca agcacctact
     1381 ggaaatgcac ggcctcgaag tgttccatgc gcggccgatc ccgagccatg gcggatcgat
     1441 ccgcgtttat gcggcgcggc acggcacaca cgcggtgcag cacagcgtgg gcgacatgct
     1501 tgccgccgag ccgcgcggcg cggcgatggc cgaacgcctg gcatcgttca ggcacgacgt
     1561 ggtgctctcg aagctccgtc tcctcgcgat gctgcgcgac ttcaaggaaa aaggcgcccg
     1621 cattgccggc atcagcgcgc cgtcgcgggc gagcacgctc gtcaattacg tcgggctcga
     1681 cgaggccatc atcgactatg tctgcgaaat ccccggctcg ctgaagatcg gccggtacat
     1741 gcccgggacc cggattccgg tcgtggacga agcgcgcctc tattcggacc agcctgacta
     1801 cgccgtgatc ttctcctggc acatcgccga tgagctcgcg cccaaggtca aggccaaggg
     1861 cttccgcggc caaataatca cgccgctgcc ggtgccgcgg gtcgtgcagg ctgcgccatg
     1921 agcatcgacg gcgtccagga caagcagaag gagatcgcct tcttcgacgc ccatgcggtg
     1981 agcgacgaat acgacgtgtt cacgccggag gcgagcgcgc ggctcatttc cgcctacgtg
     2041 cggctgagcg gcctgccgcg cggcgcgcgc gtcgccgacc tcggctgcgg atcgggagta
     2101 ttcaccgatc tgctgcggcg cgcgggctat tccggcatcg gcctcgacat cagccccaaa
     2161 ctggtggcgc tcggccgcag caaacatccc ggcctggaac tgatcgaagg cgatgccgag
     2221 aacctgccgt tcggcaatgc gagcttcgat ggcgtgctgc tcagcggcct ggtgcaccat
     2281 tttcccgatc cgcggcggct cgccgccgag gtctgccgcg tgctcaaaac aggcggccgt
     2341 ttcgtcgcct tcgatcctaa tcgcatgaac ccgttcatgt ggctctatcg cgatcgcgcg
     2401 tcgccattct acagtccggt gggcgtcacc gagaacgagc ggccgatcct ggcgtcgcgg
     2461 gtcgccgcag tcttccgcaa cgagggtttc cgggtgcaga ccgactatct cgcggggctc
     2521 gcctatcgct acgtcgcctc gccggcgaca cggacgctgc tgccgatcta taatttcatc
     2581 gatgccaccc tcttcgggct tgcgatcatg cggccgttcc gccccttcgt gctgaccagc
     2641 ggcgaaaagc tcacatgacc gtacggccga agatcagcgc tgcggacgcg ccaacgaccg
     2701 tcgaaaatgc cgaggtgact gttgtcggcg gcgccggcca tgtcggcgtt ccgctggtgc
     2761 tggcgctggc ggaagccggc ctgcgggtca acatcaacga tctcaacaag gaaagcctcg
     2821 aagcgctacg agccggccgg ctgccgttta tcgagcacgg cgccgcgaac gtgctgagcc
     2881 aggcgctgac cagccggcgt ctcgtcttca cccactcgtc cgaccgcatc tccggcgacg
     2941 gtccggtcat catcaccatc ggcacaccga tcgacgagtt cctcaatccg gtccgcaagg
     3001 tggtccagga ttgcgtcgac gcgctgctgc cgtcgcttgc cgacggccag ctcgtcgtgc
     3061 tgcgctcgac cgtgttcccc ggcaccaccg actggctcgc gtcctatctg cacgccaagg
     3121 gccgccgcct gaaggtggcg ttctgcccgg aacgcgtagt tcagggcaac ggcctcaagg
     3181 aactgcgcga catgccgcag atcgtcagcg gcaccacgcc tgacgccgag cgcgaagcgg
     3241 cggcgctgtt cgagcgcatc gcgccggaag tggtggtggt ttcgcccata gaggcggaat
     3301 tcgccaagct gttcagcaac gcctaccgct acatcgaatt cgccgccacc aacgagttct
     3361 atctggtcgc caagtcggcc ggcgtcgatt accagcgcgt gctcaaggcg atgacgcaca
     3421 attatccgcg cctgaagggg atgccgcggc cgggtttcgc cgccggcccg tgcctggtca
     3481 aggatacgat gcagctcagc gccttcgccc gcaaccagtt cggcctcggc catgccgccc
     3541 tgctgatcaa cgaggggctg gtgctgcacg tggtcgacga catcaagcgc cgctacgacc
     3601 tcgccaacac cagcgtcggc ctgctcggca tggccttcaa ggcggaaagc gacg
//
LOCUS       DATMQB010000161         9657 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1908305, whole genome shotgun sequence.
ACCESSION   DATMQB010000161 DATMQB010000000
VERSION     DATMQB010000161.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9657)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9657)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9657
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1908305"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1086
                     /locus_tag="VNY79_05000"
     CDS             <1..1086
                     /locus_tag="VNY79_05000"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HWX71835.1"
                     /translation="VGIGVASCQEKGVFSATEFWMLNREPGFALTSSPESASVKIDPT
                     GKAVISLHAPCWGNSPETVATMVLAEQLAMDPADISVAYSDTDHGLPGTGPGGSRYTV
                     MVTGAITGAASIIKEKLKRVAGHMLEAGPHDLEFRSGKVGVKGAPGLEVAIAEVAMQA
                     HFFRLSLPDDPALTSGLEASYTYDHPLATLPKNNSDFGIFYPIMGHMCHMPVVEVDVK
                     TGQVTFLDYVAVHDCGTMINPMTVDGHVRGGTAQGIGTALLEHFEYDRNGQLLTTSFQ
                     DYLMPRVAELPPAIRIGHLVTPSPYTEYGVKGAGEGGRMVAPPAVVAAIEDALRPLGV
                     RIDTVPITPAGLRALIREAEARKGGGR"
     gene            1217..3544
                     /locus_tag="VNY79_05005"
     CDS             1217..3544
                     /locus_tag="VNY79_05005"
                     /EC_number="2.7.6.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0015970 - guanosine tetraphosphate
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HWX71836.1"
                     /translation="MARSPVDLPRMQNQARPRVAVAHGPTLVPLDAEAAPKPRKPLLM
                     RQYDLIDKVKQYNPAANEDLLNRAYVYAMRAHGEQMRASGDPYFSHPLQVAAILTELK
                     LDDATIAAALLHDTIEDTDATRAEIDRLFGRDIGVLVEGLTKLKKLDLVTKEAKQAEN
                     LRKLLLAIADDVRVLLIKLADRLHNMRTIAHRPPEARRRTAQETLDIYAPLAGRMGMH
                     EMREELEDLSFRELNPDAYSVISERLDALAVRSSGWITEIEQQLARKLADSGIAAEVS
                     GRRKRAYSIWRKMERKAVGFEQLSDIFGFRVVVAGVAECYQALGIVHMTWPVVPGRFK
                     DYISTPKQNDYRSIHSTVIGPGKQRVELQIRTREMHQIAEYGIAAHALYKDGLGSPTE
                     LLSRESKAYAWLRRTIELLAEGSNPEEFLEHTKLELFQDQVFCFTPKGKLIALPRGAT
                     PIDFAYAVHTDVGNMAIGAKINGQIAPLVSALQNGDEVHIITSKAQAAPPAVWESIVA
                     TGKARAAIRRATRVAVRSQYSGLGRRMLERLCQRAKIAYADEKLQGALHRLARASIDD
                     VMSAVGRGEMKASDVVRAMHPDYKDERVTPLAPKPESGWFGLKRAKAVKFKLPEKSEN
                     GAAIPIRGINTDLPVRFAPNGGAVPGDRIVGIMTPGEGITIYPIHSPALTAFEDEPDR
                     WLDVRWDVDDELPQRFPARLAVQSVNEPGSLAQIAQVIAEHDGNIDNIRMTRQSPDFT
                     EIAIDLEVYNLKHLTSIISQLRAKKVVANAERVNG"
     gene            3597..4364
                     /locus_tag="VNY79_05010"
     CDS             3597..4364
                     /locus_tag="VNY79_05010"
                     /EC_number="2.6.99.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033856 - pyridoxine 5'-phosphate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine 5'-phosphate synthase"
                     /protein_id="HWX71837.1"
                     /translation="MPAHHPIRLGVNIDHVATVRNARGGRHPDPLKAAEIAIAAGADG
                     ITAHLREDRRHIVDDDIARLKARISKPLNLEMAATPEMIEIARRVRPHAACVVPERRQ
                     ERTTEGGLDAAGQREALRGAVARLADAGIRVSLFIAAEPAQIEAAAAIGAPVIEIHTG
                     AWCEAVTAGEAAAATEFERIVRGAALARSAGLEVHAGHGLDFITAERIAALPEIVELN
                     IGHFLIGEAVFDGLAEAVRRMRAAMDRGRARIDDGRR"
     gene            4361..4768
                     /gene="acpS"
                     /locus_tag="VNY79_05015"
     CDS             4361..4768
                     /gene="acpS"
                     /locus_tag="VNY79_05015"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008897 - holo-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0008610 - lipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HWX71838.1"
                     /translation="MIIGIGSDITDVRRIAKVIDRHGERFIDRIFTPTERAKAEKRRN
                     RVETYAKRFAAKEACAKALGTGFRAGVWWRDMGVVNLPSGRPTLELTGGAKRRLEAIT
                     PAGYEARIDLTITDEGPMAHAFVVISAIAVAHP"
     gene            4979..5731
                     /gene="lepB"
                     /locus_tag="VNY79_05020"
     CDS             4979..5731
                     /gene="lepB"
                     /locus_tag="VNY79_05020"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006465 - signal peptide processing
                     [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase I"
                     /protein_id="HWX71839.1"
                     /translation="MSVQTGTKRKEGGFAETVRVVIHALIIALVIRTFLFQPFNIPSG
                     SMIPTLLVGDYLFVSKYSYGYTHYSLPFSPPVFSGRILGQQVDRGDVVVFRLPKDDSI
                     DYIKRVIGLPGDRIQMIDGILNINGEPVKRQRIDDYVTSEEGAVQRVKRFRETLPNGV
                     TYTTLDLTDNGFYDNTAVYTVPSGDYFMMGDNRDNSTDSRVLSQVGYVPYQNIIGKAQ
                     IIFFSIKDGAHAWEVWRWPWTVRWNRLFTLVR"
     gene            5689..6564
                     /gene="rnc"
                     /locus_tag="VNY79_05025"
     CDS             5689..6564
                     /gene="rnc"
                     /locus_tag="VNY79_05025"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004525 - ribonuclease III activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HWX71840.1"
                     /translation="MDRPLEPPVHPREMKRRRKATSTAAPPQGPSAEEVASAPAPSVP
                     TAPAGGQKDARPRRRRGDGSLEERIGYRFADASLLDSALSHISALKGARNRVGSYQRL
                     EFLGDHVLGLVISDMLFRAFPRADEGELSRRLADLVRKETCAEIARAIDLGAAIRLGA
                     SEANAGARTRPAILADVCEALIGAVYLDGGFAAAEALIGRLWQVRMKTKAEPARDPKT
                     VLQEWAQGRGLPTPAYREIARSGPDHDPQFRVAVQLPHLAPAEGSGRSKRAAEQAAAA
                     AMMKREGVKPQRLDG"
     gene            6557..7471
                     /gene="era"
                     /locus_tag="VNY79_05030"
     CDS             6557..7471
                     /gene="era"
                     /locus_tag="VNY79_05030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HWX71841.1"
                     /translation="MAEPAASESRCGFAALIGAPNAGKSTLVNALVGTKVSIVTPKAQ
                     TTRTLIRGIAVDGPAQLILVDTPGIFAPRRRLDRAMVGTAWGGARDADIAALVVDSRK
                     GVEDEDEGVIRGLAEVRAAKLLVLNKVDVVAKPALLALTQMLNERAAFAAIFMISALT
                     GDGVADLKRWLGAHVPAGPWLYPADQIADAPLRQLAAEITREKLYLRLHQELPYQSTV
                     ETEVWKELKDGSLRIEQTIYVERESQRKIVLGKGGQTIKAIGAAARADIAVAIEQPVH
                     LFLFVKVREGWGDDPERYREMGLEFPRE"
     gene            7611..8360
                     /gene="recO"
                     /locus_tag="VNY79_05035"
     CDS             7611..8360
                     /gene="recO"
                     /locus_tag="VNY79_05035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HWX71842.1"
                     /translation="MEWIDEGIVLGVKRHGETSVILELMTHGRGRHLGLVRGGSGARL
                     RAVLQPGNSLRATWRARLDDHLGHYLVEGINLRAAGFLAAAHAVHGVTHLASLCRLLA
                     EREPHAGIHGALEAILDVLGDPAAVAPMIARFELAFLGELGFGLDLASCAVTGASADL
                     IYVSPRSGRAVSRAAGEPYRDKLMRLPRFLQDDVEAASAADLADAFTLAGFFLERHAF
                     APRGLALPDARARFVAAVLVRSGQPRYPVAP"
     gene            8357..>9657
                     /gene="parC"
                     /locus_tag="VNY79_05040"
     CDS             8357..>9657
                     /gene="parC"
                     /locus_tag="VNY79_05040"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009340 - DNA topoisomerase IV complex
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HWX71843.1"
                     /translation="MNEKLIPPAPGEVQEIALREALEERYLAYALSTIMHRALPDARD
                     GLKPVHRRILYGMRLLRLDPGAAFKKSAKIVGDVMGNFHPHGDQAIYDALVRLAQDFS
                     SRYPLVDGQGNFGNVDGDNPAAYRYTEARLTEAARLLLDGIDEDAVDFRPSYDNVMQE
                     PVVLPAALPNLLANGAQGIAVGMATAVPPHNIAELCDAALHLIEQPNARSRTLLKFVP
                     GPDFPTGGIIVDPPEAIAEAYTTGRGSFRLRARWKTEDTGRGTYQIVVTEIPWQVQKM
                     RLVERIAELINEKKLPLLADMRDESAEDVRVVLEPRSRAVDPELLMESLFKLTELESR
                     VPLNMNVLVNGRIPKVVGLAEALSEWLAHRRDVLLRRSRHRLAQIEHRLEVLGGYLVA
                     YLNIDKVIKIIRQEDEPKPVLMKTFKLSDIQADAILNMRLR"
BASE COUNT         1646 a         3330 c         3157 g         1524 t
ORIGIN      
        1 gtcggcatcg gcgtcgccag ctgccaggaa aagggcgtgt tcagcgcgac cgaattctgg
       61 atgctcaacc gtgagccggg cttcgcgctg accagctcgc cggaaagcgc ttcggtcaag
      121 atcgacccga ccggcaaggc cgtgatctcg ctgcatgccc cgtgctgggg caacagcccc
      181 gagaccgtgg cgaccatggt gctcgccgag cagctcgcga tggatccggc cgacatcagc
      241 gtcgcctatt cggacaccga tcacggcctc ccgggaaccg ggccgggcgg cagccgctac
      301 accgtcatgg tcaccggggc gatcaccggc gccgcgtcga tcatcaagga aaaactcaag
      361 cgcgtggccg gccacatgct cgaagccggc ccccacgatc tcgaattccg cagtggcaag
      421 gtcggcgtca agggtgcgcc cgggctcgaa gtagcgatcg ccgaggtggc gatgcaggca
      481 cacttcttcc gcctgtcgct gcccgacgac ccggcgctga ccagcggact tgaagcgagc
      541 tacacctacg accacccgct ggcgacgctg cccaagaaca attccgattt cggaatcttt
      601 tatccgatca tggggcacat gtgccacatg ccggtggtcg aggtcgatgt gaagaccggt
      661 caagtcacct ttctcgatta cgtcgccgtg cacgattgtg gcaccatgat caacccgatg
      721 acggtcgacg gccatgtgcg cggtgggacc gcgcagggca tcggcacggc gctccttgaa
      781 cacttcgagt atgaccgcaa cggccagctc ctgaccacgt cgtttcagga ctacctgatg
      841 ccgcgggtgg ccgaattgcc gccggcgatc cgcatcggcc atctggtgac gccctcgccc
      901 tataccgaat acggggtcaa gggcgccggc gagggcggcc gcatggtggc gccgccggcg
      961 gtcgtcgccg cgatcgagga cgccctgcga ccgctcggcg tgcgcatcga taccgtgccg
     1021 atcacgccgg cggggctgcg cgcgctcatc cgcgaggcag aggcgcgcaa aggcggggga
     1081 cgttaacgga gcgtttgcca agcccggcga tggtggcgcc gggaagccgt tccgacacgg
     1141 cttgtggcgc ggaccgtccg tcatgatatc tttatggtca gctctcgccg attttcgcgg
     1201 cggagccgag gactttatgg cgcgctcgcc ggtcgacctg ccgcgaatgc agaaccaagc
     1261 ccggccccgg gtagcggtgg cgcacggccc gaccctggtg ccgctcgatg cggaagcggc
     1321 gccaaagccg cgcaagccgc tgttgatgcg gcaatacgac ctgatcgaca aggtcaagca
     1381 gtacaatccc gccgccaacg aagacctgct caaccgcgcc tatgtctatg ccatgcgggc
     1441 gcatggtgag cagatgcggg cctccggcga cccttacttc tcccacccgc tgcaggtcgc
     1501 cgcgattctc accgagctca agctcgacga cgcgaccatc gccgcggcgc tgctgcacga
     1561 cacgatcgag gacaccgacg cgacccgcgc cgagatcgac cgcctcttcg gccgcgacat
     1621 cggcgttctg gtcgaagggc tgaccaagct gaagaagctc gacctggtca ccaaggaggc
     1681 gaagcaggcc gagaatctgc gcaagctcct gctcgccatc gccgacgacg tacgggtctt
     1741 gctgatcaag ctcgccgacc ggctgcacaa catgcgtacc atcgcgcatc ggccgccgga
     1801 ggcgcgccgc cgcacggcgc aggagacgct cgacatctac gcgccgctcg cgggccggat
     1861 gggcatgcat gagatgcgcg aggagctgga ggacctctcc ttccgcgagc tcaaccccga
     1921 cgcctacagc gtgatcagcg agcggctcga tgcgctcgcc gtgcggtcga gcggctggat
     1981 cacggagatc gagcagcaac tggccaggaa gctcgccgat agcggcatcg ccgccgaggt
     2041 ctccggccgg cgcaagcgcg cctattcgat ctggcgcaag atggaacgca aggccgtcgg
     2101 cttcgagcag ctctccgaca tattcggctt ccgcgtcgtg gtcgcgggcg tcgccgagtg
     2161 ctaccaggcg ctcggcatcg tgcacatgac ctggccggtc gttcctggcc gcttcaagga
     2221 ctacatctcg acgcccaagc agaacgacta ccgctcgatc cattcgaccg tgatcgggcc
     2281 gggcaagcag cgcgtcgagt tgcagatccg cacccgagag atgcaccaga tcgccgaata
     2341 cggcatcgcc gcgcatgcgc tctacaagga cggtctcggc tccccgaccg agcttctgtc
     2401 ccgcgagtcg aaggcctatg catggctccg ccgcaccatc gagctgctcg ccgagggctc
     2461 caatcccgag gagtttctgg agcacaccaa gctggagctg tttcaggatc aggtgttctg
     2521 cttcacgccg aagggcaagc tgatcgcgct gccgcgcggg gcgacgccga tcgatttcgc
     2581 ttatgcggtg cacaccgacg tcggcaacat ggcgatcggc gccaagatca atggccagat
     2641 cgcgccgctc gtttcggcgc tgcagaacgg cgacgaggtg catatcatca cgtcgaaggc
     2701 gcaggccgcg ccgccggcgg tctgggaatc gatcgtcgcc accggcaagg cgcgggccgc
     2761 gatccggcgc gcgacgcggg tggcggtgcg cagccaatat tccggtctcg gccggcgcat
     2821 gctcgaacgg ctctgccagc gcgccaagat cgcctacgcc gacgagaagc tgcagggcgc
     2881 cttgcaccgg ctcgcgcgcg cttcgatcga cgacgtgatg tcggcggtcg gccgcggcga
     2941 gatgaaggcg tccgacgtcg tgcgggcgat gcaccccgac tacaaggacg agagggtgac
     3001 gccgctcgcg cccaagccgg aaagcggctg gttcggcctc aagcgcgcca aggcggtcaa
     3061 gttcaagctg ccggagaaga gcgagaacgg cgccgccatc ccgatccgcg gcatcaacac
     3121 cgacttgccg gtgcgcttcg ctcccaatgg cggggccgtt cccggcgacc gcatcgtcgg
     3181 catcatgacg ccgggcgaag gcatcaccat ctacccgatc cactcgccgg cgctgaccgc
     3241 cttcgaggat gagccggacc gctggctcga cgtgcgctgg gacgtggacg acgagctgcc
     3301 gcagcgtttc ccggccaggc ttgcggtgca atcggtgaac gagccgggct cgctcgcgca
     3361 gatcgcgcaa gtcatcgccg agcacgacgg caacatcgac aatatccgca tgacccggca
     3421 gtcgccggac ttcaccgaga tcgccatcga cctggaagtc tacaacctca agcacctcac
     3481 ctcgatcatc tcgcagctgc gggcgaagaa ggtcgtagcc aacgccgagc gggtaaacgg
     3541 gtgataccgg cgcgaagccg ccggctctcc catcgctcca ttcatccact atgcctgtgc
     3601 ctgcgcatca ccccatccgc ctcggcgtca acatcgatca cgttgcgacc gtgcgcaacg
     3661 cacgcggcgg ccggcacccc gatccgttga aggcggcgga gatcgcgatc gccgccggcg
     3721 ccgacggcat caccgcgcac ctgcgcgagg atcgccgtca catcgtcgac gacgacatcg
     3781 cgcggctcaa ggcgcgcatc agcaagccgc tcaatctcga aatggcggcg acgccggaaa
     3841 tgatcgagat cgcgcgccgg gtgcgcccgc acgccgcgtg cgtggttccc gagcggcggc
     3901 aggagcgcac gaccgaaggc gggctcgatg ccgccggcca gcgtgaggcc ttgcgcggcg
     3961 ccgtcgccag gctggccgat gctggcattc gcgtgtcgct gttcattgcc gccgagccgg
     4021 cgcagatcga ggcggcggcc gcgatcggtg cgccggtcat cgagattcat actggagcgt
     4081 ggtgcgaggc tgttaccgct ggcgaggccg cggccgccac cgaattcgaa cgcatcgtgc
     4141 ggggggccgc gctcgccaga agcgccggcc ttgaagttca tgccggccac ggcctcgatt
     4201 tcatcacggc ggagcggatc gcggcgcttc ccgaaatagt cgagctcaac atcggccatt
     4261 tcctgatcgg cgaagcggtc ttcgacggcc tcgccgaggc ggtgcgacgg atgcgcgcgg
     4321 cgatggaccg cggccgggct agaatcgatg atggccggcg atgatcatcg gcatcggctc
     4381 cgacatcacc gacgtgcgcc gcatcgccaa ggtgatcgat cgccatggcg agcgcttcat
     4441 tgaccgcatc ttcaccccga ccgagcgggc gaaggcggaa aagcggcgga atcgcgtcga
     4501 gacttacgcc aagcgcttcg ccgccaagga agcgtgcgcc aaggcgctgg gcacgggttt
     4561 ccgtgccggg gtctggtggc gcgacatggg cgtcgtcaac ctgccgtcgg ggcggccgac
     4621 gctcgaactc accggcggcg ccaagcgccg cctcgaggcg atcacgcccg cgggctacga
     4681 ggcgcgcatc gacctcacga tcaccgacga aggccccatg gcccacgcct ttgtggtcat
     4741 ttcggcgatt gccgtggccc acccgtgagg tgcgggcccg gccatctttg ccggaaggtt
     4801 gtgcgcactc ggcaatgaaa attcatcatg cctccgcgct ggagctaagc tcatgacgct
     4861 cctaggtaaa cgcgacggcc ggtcctgcgg ccaggtctcg cgtgcaattg cgtgcgtggg
     4921 tgtcagaggc tacaaggtcg cggcggggcg ataagtgcca caacgggacg acaggccgat
     4981 gagcgtgcag accgggacca aacggaaaga aggtggattc gccgagaccg tacgtgtggt
     5041 cattcatgct ctcatcatcg ccctggtcat ccgcacgttc ctgttccaac cgttcaatat
     5101 cccttccggc tcgatgattc cgacgctgct tgtcggcgac tacctgttcg tctccaaata
     5161 ttcgtacggc tatacgcatt actcgctgcc gttctcgccg ccggtgttct cgggccgcat
     5221 cctcggccag caggtcgatc gcggcgatgt ggtggtgttc cgcctgccca aggacgactc
     5281 gatcgactac atcaagcgcg tcatcggcct ccctggcgac cgcatccaga tgatcgacgg
     5341 aatcctcaac atcaacggcg agccggtgaa gcgccagcgc atcgacgact atgtgaccag
     5401 cgaagagggc gccgtgcagc gggtcaagcg cttccgcgaa accctgccga acggcgtgac
     5461 ctacactacg ctcgatctca ccgacaacgg cttctatgac aacaccgcgg tctacaccgt
     5521 gccgtcgggc gactatttca tgatgggcga caaccgcgac aactcgaccg acagccgggt
     5581 gctcagccaa gtcggctacg tgccgtacca gaacatcatc ggcaaggcgc agatcatctt
     5641 cttctcgatc aaggacggtg ctcacgcctg ggaagtgtgg cgctggccat ggaccgtccg
     5701 ctggaaccgc ctgttcaccc tcgtgagatg aagcggcggc ggaaagccac ttcgaccgca
     5761 gcgccgccgc aagggccgtc tgccgaggaa gtcgccagcg cgcccgctcc gtcagtccca
     5821 accgcgccgg ccggcggaca gaaggatgcg cgcccgcgcc gccggcgcgg cgacggttcg
     5881 ctcgaggagc gcatcggcta tcggttcgcc gacgcgtcgt tgctcgacag cgcgctctcg
     5941 cacatctccg cgctcaaggg cgcgcgcaac cgcgtcggca gctaccagcg gctcgagttt
     6001 cttggcgacc acgtgctcgg cctcgtcatt tccgacatgc tgtttcgcgc ttttccgcgc
     6061 gccgacgagg gcgagctgtc gcgccgcttg gccgatctcg tgcgcaagga gacctgcgcc
     6121 gagatcgcgc gtgcgatcga cctcggcgcg gcgattcggc tcggcgcctc ggaagccaat
     6181 gccggcgcgc gcacgcggcc ggcgatcctt gccgacgtct gcgaggctct gatcggcgcg
     6241 gtctatctcg acggcggctt cgccgccgcc gaggcgctga tcggacgcct gtggcaggtg
     6301 cgcatgaaga cgaaggccga gccggcgcgt gatccgaaaa cggtcctgca ggaatgggcg
     6361 cagggccgtg gcctgccgac gccggcctat cgcgagatcg cgcgctccgg cccggaccac
     6421 gacccgcagt ttcgcgtcgc cgtgcagctt ccccatctcg cgccggcgga agggtccggc
     6481 cgctcgaaac gcgccgccga gcaggccgcc gcggcggcca tgatgaagcg cgaaggcgtc
     6541 aagccccaac ggctcgatgg ctgagccggc cgcaagtgaa tcccgctgcg gcttcgcggc
     6601 gctcatcggg gcgcccaatg cgggaaaatc gacgctggtc aacgccctcg tcggcaccaa
     6661 ggtctcgatc gtcacgccga aggcgcagac cacccgcaca ctcattcgcg gcatcgccgt
     6721 cgacggcccg gcgcagctca tcctggtcga cacgccgggc attttcgcgc cgcggcgccg
     6781 gctcgaccgc gccatggtgg gcaccgcctg gggcggcgcg cgagatgcgg acatcgccgc
     6841 cctcgtcgtc gacagccgca agggcgtcga ggatgaggac gaaggggtca tccgcggcct
     6901 cgccgaggtc cgcgcggcga agcttctcgt gctcaacaag gtcgatgtcg tcgccaagcc
     6961 tgcgctgctg gcgttgacgc aaatgctcaa tgagcgcgcg gcctttgccg cgatcttcat
     7021 gatctccgcg ctcaccggcg acggcgttgc ggacctcaaa cgctggctcg gcgctcacgt
     7081 gccggcgggg ccgtggcttt atcccgctga ccagattgcg gatgcgccgc tgcgccagct
     7141 cgccgccgag atcacccgcg agaagctcta tctgcggctg caccaggaac tgccgtacca
     7201 gtcgacggtc gagaccgaag tctggaagga gctcaaggac ggctccctgc gtatcgagca
     7261 gacgatctat gtcgagcgcg agagccagcg caagatcgtg ctcggcaagg gcggccagac
     7321 gatcaaggcg atcggggcgg cggcgcgcgc cgacatcgcc gttgcgatcg agcagccggt
     7381 gcacctcttt ctcttcgtca aggtgcggga agggtggggc gacgacccgg aacgctaccg
     7441 cgagatgggc ctggagtttc cgcgggagta agatccttcc gagtcgtcat tccggggcgc
     7501 cgcgcggcgg cgaacccgga atccataacc acaatccgtg actatggatt ccgggtccgc
     7561 ggcctgcggc cgcgtcccgg aatgacggcc agcgtgcata catatccccc atggaatgga
     7621 tcgacgaagg catcgtgctc ggcgtcaagc gccacggcga gacgagcgtc attctcgaat
     7681 tgatgacgca cgggcgcggt cgccatctcg gtctggtacg cggcggcagt ggcgcgcggc
     7741 tgcgcgccgt gctgcaaccg gggaattcgc tgcgcgccac ttggcgggcc aggctcgacg
     7801 accacctggg ccactatctg gtcgaaggaa tcaatctgcg cgccgccggc tttcttgccg
     7861 cggcgcatgc cgtccacggg gtcacgcatc tcgcgtcctt gtgccgtctg ctcgcggaac
     7921 gcgagccgca tgcgggcatc catggcgcgc tcgaagcgat cctcgacgtg ctcggtgatc
     7981 cggccgcggt cgcgccgatg atcgcgcgct tcgagctggc cttcctcggc gagctcggtt
     8041 tcgggctcga tctcgcttcc tgcgcggtca ccggcgcgag cgccgatctc atctacgtgt
     8101 cgccgcgctc gggccgcgcc gtctcgcgcg ccgccggcga gccttatcgc gacaagctca
     8161 tgcggctgcc gcgcttcctg caggacgacg tcgaggctgc ttccgccgcc gatctcgccg
     8221 acgccttcac gctcgccggc ttctttctcg agcgccacgc tttcgcgccg cgcggcctgg
     8281 cgctgccgga cgcccgcgcc cgcttcgtcg ccgccgttct tgttcgcagc ggccaaccgc
     8341 gctaccccgt tgcgccatga atgagaaact gattcccccc gcgccaggag aagtgcagga
     8401 gatcgcgctg cgcgaggcgc tggaggagcg ctatctcgcc tacgcgctct ccaccatcat
     8461 gcaccgcgcg ctccctgacg cgcgcgacgg gctcaagccg gtgcatcgcc gcatcctcta
     8521 cggcatgcgg ctcctgcgtc tcgatcccgg cgccgcgttc aagaaatcgg caaagatcgt
     8581 cggcgacgtg atgggcaact tccacccgca cggcgatcag gcgatctatg acgcgctggt
     8641 gcgtctcgcc caggattttt cctcgcgcta cccgctggtc gacggccagg gcaatttcgg
     8701 caacgtcgac ggcgacaatc ccgccgccta ccgctacacc gaggcgcggc tgaccgaggc
     8761 ggcgcggctt ctgctcgacg gcatcgacga ggacgcggtc gacttccgcc cgagctacga
     8821 caacgtgatg caggagccgg tcgtcttgcc ggcggccctt cccaatctgc tcgccaacgg
     8881 cgcccagggc atcgcggtcg gcatggcgac ggcggttccg ccgcacaaca tcgccgaact
     8941 ctgcgacgcg gcgctgcacc tcatcgagca gccgaacgca cggagtcgca cgctgctgaa
     9001 attcgtaccc ggccccgatt tcccgaccgg cggcatcatc gtcgatccgc cggaggcgat
     9061 cgccgaagcc tacacgaccg gacgcggctc cttccgcctg cgcgcacgct ggaagaccga
     9121 ggacaccggg cgcggcacct atcagatcgt agtcaccgaa atcccctggc aggtgcagaa
     9181 gatgcggctc gtcgagcgca tcgccgagct gatcaacgag aagaagctgc cgctccttgc
     9241 cgacatgcgc gacgagtcgg ccgaggacgt gcgcgtcgtg ctagagccgc gctcgcgcgc
     9301 ggtcgatccg gagctgttga tggagagcct gttcaagctc accgagcttg aaagccgcgt
     9361 gccgctcaat atgaacgtgc tggtcaatgg ccgcatcccg aaggtcgtcg gccttgccga
     9421 agcgctgagc gagtggctcg cgcaccgccg cgacgttctg ctgcgccgct cgcggcatcg
     9481 gctggcgcaa atcgagcatc ggctcgaagt tttgggcggc tatctggttg cctatctcaa
     9541 tatcgacaag gtcatcaaga tcattcgcca ggaggacgag cccaagcctg tcctgatgaa
     9601 gacattcaaa ttgtcggaca tccaggcgga cgccatcctc aacatgcggc tgcgcaa
//
LOCUS       DATMQB010000162         2052 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_980659, whole genome shotgun sequence.
ACCESSION   DATMQB010000162 DATMQB010000000
VERSION     DATMQB010000162.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2052)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2052)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2052
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_980659"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1983)
                     /locus_tag="VNY79_05045"
     CDS             complement(<1..1983)
                     /locus_tag="VNY79_05045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HWX71844.1"
                     /translation="MPPLAVPTRDAEDKDDLLRYGAVRLFRERVRAAEPHFAADRRRA
                     AMIAAICRRLDGIPLAIELAAARTATLGIEELSARLDDRFQLLTGGRRMALPRHQTLR
                     ATLDWSYELLTEPERAVLRRLAIFAGAFSLEAAGKVAASPEAAPSEVVDGVSSLVAKS
                     LVAAEVDGTIARYRLLDTTRAYALEKLGDSGELEAIARHHAEYYRDLFERAEAQWERR
                     PAAEWLGEYGRQIDNLRAALDWAFTPAGDASIGVVLTAAAVPLWMHLSLMEECRGRVE
                     RALAAIAAGAGRDTRREMQLHAALATSLMYTRGAVSEIEVVGKKAFEIAESLGDTEYQ
                     LRSLWGLWSFCVMGGQQCVALTLAQRFYTLAAKRSDPNDRLIGERMIGTSQYYLGDLL
                     SARRHLERVLAYYLPPVQKPHSIRFQIDQRVAAGTFLARVLWLQGFPDQAMRTAEGNV
                     EDAHAANHVMTLCSTLSQAPCHIALLVGDLAAAEHYVRMLLDHSTRHALPLWRAWSRC
                     HQGVLVIRRGDLVTGLQLLRAGLDELGEATSALRFPTFLGEMAEALGHAGQIADGLAV
                     IEEAIVRSERTEERWVIAELLRIKGELLLLQGAPGAPAAAEGHFRQALDWARRQGALS
                     WELRAATSLARLLSDQGRSADATALLQPVYDRFTEGF"
BASE COUNT          354 a          709 c          658 g          331 t
ORIGIN      
        1 gaacccttcg gtaaaccggt catagaccgg ctggaggagt gccgtcgcat cggcggaacg
       61 gccctggtcg ctcagcagcc gggcaaggct cgtggcggcg cgcagttccc aggagagcgc
      121 gccttgccga cgcgcccagt cgagcgcctg ccggaagtga ccctcggccg ccgccggggc
      181 tccgggcgcg ccctgcaaca gaagaagctc gcccttgatg cgcagcaatt cggcaattac
      241 ccagcgttct tcggtgcgct cggagcggac gatcgcctcc tcgatcacgg cgagcccgtc
      301 ggcgatctgc ccggcatggc ccaaggcctc tgccatctca cctaggaacg tggggaaccg
      361 caacgcggac gtggcttcgc cgagttcgtc caagccggcg cgcagcagct gcagtccggt
      421 gacgagatcg ccgcgcctga tgacgagcac tccctgatgg cagcggctcc aggcgcgcca
      481 gagcggcagc gcatgcctcg tcgaatggtc gagcagcatc cgcacgtaat gttcggccgc
      541 ggccagatcg ccgactaaca acgcgatgtg gcatggcgcc tgagacagag tggaacacag
      601 cgtcatcacg tgattggctg cgtgagcatc ctcgacgttg ccttcggctg ttcgcatcgc
      661 ctgatccgga aacccctgca gccacagaac ccgcgcgagg aaggtgcctg ctgccactct
      721 ctgatcgatc tgaaatcgaa tgctatgcgg tttctggaca ggagggagat agtaagcgag
      781 cacgcgctcg aggtggcgcc gcgcgctgag caaatcgccc aggtaatact gcgacgtacc
      841 gatcattcgc tcgccgatca gccgatcgtt cgggtcggac cgcttcgccg ccagagtata
      901 gaatctttga gccagggtca gagcgacgca ttgctggccg cccattacgc aaaaggacca
      961 caggccccag agcgagcgca actggtactc ggtgtcacca aggctctcgg caatctcgaa
     1021 ggcctttttc ccgaccactt cgatctcgga aacggcacct ctggtataca tcagcgatgt
     1081 cgcaagcgcg gcgtggagct gcatctcgcg gcgcgtgtcc cggcccgctc cggccgcgat
     1141 agcggcgaga gcccgctcga cccggccgcg gcactcctcc attagtgaca aatgcatcca
     1201 caaggggacc gcggcggcag tcaataccac gccgatcgag gcatcgccgg ccggcgtaaa
     1261 agcccagtcg agcgccgcgc gcaaattgtc gatttggcgc ccgtattcgc ccagccattc
     1321 ggccgcggga cgcctctccc attgggcttc ggcccgctcg aacagatcgc ggtaatattc
     1381 cgcatggtgg cgcgcgatcg cctccagctc gccgctgtcg ccgagctttt cgagcgcata
     1441 ggcccgcgtc gtgtcaagca ggcggtagcg cgcgatggtg ccgtcgacct ccgccgcgac
     1501 gagcgacttc gcgactaggc tggaaacgcc gtcgacgact tccgatggcg cggcctcggg
     1561 gctcgctgcg actttaccgg ccgcctccag gctgaaggca ccggcgaaga tggccaggcg
     1621 acgcaggacc gcgcgttcgg gctcggtcag cagctcatag ctccagtcga gcgtcgcccg
     1681 caaggtctgg tgccgcggca atgccatccg ccggccgccg gttagcagct ggaagcgatc
     1741 atcgaggcgc gcgctaagtt cctcgatgcc gagtgttgcg gtgcgcgccg ccgccagctc
     1801 gatcgctagt gggatgccgt cgagccgccg gcagatcgcc gcgatcatgg ccgcacggcg
     1861 ccggtccgct gcgaaatgcg gctccgccgc acgcaccctc tcgcggaaca accgcacggc
     1921 gccgtatcgc agcaggtcgt ccttatcctc ggcatccctt gtcggcacgg cgagcggcgg
     1981 caccggatag atccactccc cctctgcctt gagcggctcc cggctcgtta cgacgacctg
     2041 cgccgccggg tt
//
LOCUS       DATMQB010000163         3881 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_51975, whole genome shotgun sequence.
ACCESSION   DATMQB010000163 DATMQB010000000
VERSION     DATMQB010000163.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3881)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3881)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3881
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_51975"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..3836)
                     /locus_tag="VNY79_05050"
     CDS             complement(<1..3836)
                     /locus_tag="VNY79_05050"
                     /inference="COORDINATES: protein motif:HMM:NF020083.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HWX71845.1"
                     /translation="MLRTTRTVIVDEIHALAPNKRGSHLALSLARLDSLVGRRVQRIG
                     LSATQKPIEAVADFLVGRTEQDKQRSCTIIDTGHGRARDLALEIPGAPLEAVMSNEVW
                     EEVYRRIADLVAGHRTTLIFVNTRRLAERATRKLSELMGEEHVTAHHGSLAKEQRLDA
                     EQRLKSGKLKALVATASLELGIDIGDVDLVCQLGSPRAIATFLQRVGRSGHAVAGTPK
                     GRLFPLSRDELVECTALLDSVRRGELDRLAIPEQPLDVLAQQIVAETAARDWNEDDLF
                     QRFRQALPYRVLTREDFDAVLDMLAQGFSARHGRRGALIHRDAINHVIRGRKGARLTA
                     LTAGGAIPDNADYQVLLEPDNHFIGSVNEDFAVESMAGDVFQLGNRSYRIRRVERGVV
                     RVEDAQGMAPNIPFWLGEAPGRSDELSVSVSRLRAAVAERLRDDPSGEAVTRWLIDEV
                     GIGAPAAQQLVEYLQSSHAALGCLPTHETIVLERFFDEVGGMQLVVHSPYGSRINRAW
                     GLALRKRFCRKFNFELQAAATEDNIVLSLTTAHSFELADVARYLHSASVRPLLIQALL
                     DSPMFTTRWRWVAGVSLAQPRFRGGKKVAPQLARMGAEDLIAAVFPDQIACAENLAGE
                     REIPDHPLVRQTISDCLTEAMDIDGLERVLKAMESGDIRVVACDLTQPSPLALEVLSA
                     RPYAYLDDAPLEERRTQAVMARRWLAPETAADLGRLDPEAIARVRSEVRPDPRDADEL
                     HDALMWLGTLSDRDVESNAGWVDWLADLARQKRVARVEAPCGEVWIAAERLPEFQALW
                     PDAQIHAPIAVPRAKAARAWSQEEALIEILRGRLEGEGPITEDALSTLLGVESSDLKS
                     ALAALETEGFAMRGRFTPGAAVEEWCERRLLARIHHYTVKRLRSEIEPVSARDFLRFL
                     PLWQRVSPATRMEGPDAVDEIVGQLEGFEAAAAAWEAEILPVRIAGYEPAWLDDRCLA
                     GRLAWARLRPRNGRANGAEGRPGPVRATPITLLARRHTAQWGSLSASEPAIEPSFRAG
                     AVLGTIRDNGASFFEELMHGSGLLRTQVEEALAELVALGLVVSDSFAGLRALLVPSAE
                     RKPIFGGPRRRRTATFGIENAGRWALAPRARPPRGIAQSGAGADAVEHIARVLLRRYG
                     VVFWRLLDREANWLPPWRDLLRIYRRLEGRAEIRGGRFVAGFSGEQFALPEAIAQLRE
                     ARRMPPSGEWLSVSGADPLNLVGVVTPGPRLAALTGNRLLYRDGIPIALFAAGEVRFL
                     ETLDAPDEWEAHKALLR"
BASE COUNT          658 a         1333 c         1286 g          604 t
ORIGIN      
        1 cgcaacaaag ccttgtgagc ctcccactcg tccggcgcat cgagcgtctc caaaaatctc
       61 acttcacccg cggcgaacag cgcaatgggg atgccgtccc ggtaaagcag acgattgccg
      121 gtcagtgcgg caagcctagg ccccggcgta accacgccga caaggttgag cggatcggct
      181 ccggataccg agagccactc gcctgaaggc ggcatgcgcc gcgcctctcg caactgagca
      241 atcgcctccg ggagcgcgaa ctgctcgccg gaaaacccgg cgacgaaacg tccgccgcgg
      301 atttctgccc gaccttcaag ccggcgatag atgcgcagaa gatcacgcca aggcggcagc
      361 caattcgctt cacggtcgag caggcgccag aacaccacgc cgtagcgccg cagcagaaca
      421 cgggcaatgt gctcgacagc gtcggcccct gcccctgact gcgcaatgcc gcgcggcggc
      481 cgcgcccgcg gagcgagcgc ccagcggccg gcgttctcta tgccgaatgt cgcggtgcgc
      541 cggcggcggg gcccgccgaa aatcggtttg cgttcggccg aaggcacgag cagcgctcgc
      601 agtcccgcga aactatctga aacgacgagc ccgagggcaa cgagttcggc gagtgcctcc
      661 tcaacctggg tgcgcagcaa gccggacccg tgcatcaact cctcgaagaa ggacgccccg
      721 ttgtcgcgga tggtgccgag aacggcgcct gccctgaagc tcggttcgat cgccggctcg
      781 cttgccgaca aggagcccca ttgcgcggtg tgccgccgtg cgagcagcgt gatcggtgtc
      841 gcccgcaccg gtccggggcg gccttcggcg ccgttcgccc gcccgttgcg cggccgcagc
      901 cgcgcccagg cgagacgtcc ggcaagacag cggtcgtcga gccaggcagg ctcgtagccg
      961 gcgatccgca ccgggaggat ttctgcctcc cacgccgccg ccgcggcctc aaaaccttcg
     1021 agttggccga cgatttcatc gaccgcgtcg ggcccctcca tccgcgtcgc gggagagacg
     1081 cgctgccaca gcggcagaaa gcgcagaaaa tcacgcgcgc tgaccggctc gatttcgctg
     1141 cgcaagcgct tgacggtgta gtggtggatg cgggccagca gccggcgctc gcaccactcc
     1201 tcgacggcgg cgccgggcgt aaagcggccg cgcatggcaa aaccttcggt ctcgagagcc
     1261 gcgagagcac tcttgaggtc gctgctttcg acgcccagca gggtcgaaag cgcatcctcc
     1321 gtgatcggcc cctcaccttc gagccggccg cgcaggattt cgatcagcgc ttcctcctgc
     1381 gaccaggctc gcgcagcctt cgcgcgcggc actgcgatcg gcgcatgaat ttgcgcgtcg
     1441 ggccacagcg cctggaattc cggcaggcgc tcggcggcga tccatacctc tccgcacggc
     1501 gcctcgactc gcgccacgcg cttctgccgt gccaagtccg cgagccaatc gacccagccg
     1561 gcattcgatt ccacatcgcg gtcgctgaga gtgccaagcc acatcagcgc gtcgtgcagt
     1621 tcgtcggcat cgcgaggatc gggcctgacc tcggagcgca cgcgcgcaat cgcttcggga
     1681 tcaagccggc cgaggtcggc ggccgtctcc ggcgccagcc agcgccgcgc catgaccgcc
     1741 tgggtccgac gctcctccag cggcgcgtca tcgagatagg cgtaggggcg cgccgacaac
     1801 acttcgagcg ccagcggcga gggttgcgtc aggtcgcacg ccactacacg aatatccccc
     1861 gactccatcg ctttgaggac acgttccagg ccgtcgatgt ccatagcctc ggtgaggcag
     1921 tcgctaatgg tctgacgcac cagggggtga tcgggaatct cgcgctcgcc ggcgaggttt
     1981 tcggcgcagg cgatctgatc ggggaagacg gcggcgatca aatcctcggc gcccatgcgc
     2041 gcgagctggg gcgccacctt cttgccgcca cggaaccgcg gctgcgcgag cgagacaccg
     2101 gcgacccagc gccaccgcgt cgtgaacatc ggggagtcga gcagcgcctg gatcagcaac
     2161 ggccgtaccg acgccgagtg caggtagcgg gcgacgtcgg caagttcgaa actgtgcgcg
     2221 gtggtcagcg aaaggacgat gttgtcctcg gtcgccgccg cctgcagctc gaaattgaac
     2281 ttgcggcaaa agcgcttgcg cagcgcgagg ccccaggcgc gattgatccg gctgccgtag
     2341 ggcgaatgca ccacgagctg catgccgccg acttcgtcga agaagcgctc gagcacgatc
     2401 gtttcgtgcg tcggcaggca gccgagagcg gcatggctag actgcagata ttcgaccagc
     2461 tgttgcgctg cgggtgcacc gatgccgact tcgtcgatga gccaacgggt cactgcctcc
     2521 ccgctcggat catcgcgcag gcgctccgcc accgcggccc gcaggcgcga cacggacacg
     2581 gaaagctcgt cgctgcgtcc gggcgcttcg ccgagccaga agggtatgtt cggcgccatg
     2641 ccctgcgcat cttcaacacg cacgacgccc cgctcgacgc ggcggatgcg atagctgcgg
     2701 ttgccgagct ggaacacgtc gcccgccatg ctttcgaccg cgaagtcctc gttgacgctg
     2761 ccgatgaaat gattgtccgg ctccagcagc acctgatagt cggcattgtc ggggatggcg
     2821 ccgccggcgg tcagggcggt cagccgcgcg cccttccggc cgcggatcac atggttgatc
     2881 gcgtcgcggt gaatgagcgc gccgcgcctg ccgtggcggg cgctgaaccc ctgcgccagc
     2941 atgtcgagta cggcatcaaa gtcctcgcgc gtcagcaccc gatacggcaa agcctggcgg
     3001 aagcgctgga acaggtcatc ctcattccaa tcccgcgcgg ccgtctcggc gacgatctgt
     3061 tgggccaata cgtcgagcgg ctgctcggga atcgccaggc ggtcgagctc gccccggcgc
     3121 acgctgtcga ggagcgcggt gcattcgacg agttcgtcgc gcgacagcgg gaagagccgc
     3181 ccctttgggg tgcctgcgac ggcatggccc gaccggccga cgcgctggag gaaggtcgcg
     3241 atggcccgcg gcgacccgag ctggcaaacg agatcgacat cgccgatgtc gatgcctagc
     3301 tcgagcgagg ccgttgccac cagcgccttg agcttgccgc tcttgagccg ttgctcggca
     3361 tcaagtcttt gttccttggc gaggctgccg tggtgagccg ttacgtgttc ctcgcccatc
     3421 agttctgaaa gcttgcgggt ggcccgctcc gcgagccggc gcgtgttgac gaaaatcagc
     3481 gtcgtgcggt gtccggcgac cagatcggcg atgcgtcgat agacttcctc ccacacctcg
     3541 ttcgacatca ccgcctcgag cggcgctccg ggaatctcca aggccaggtc gcgggcgcgg
     3601 ccatggccgg tatcgatgat cgtgcaggat cgttgcttgt cctgctcggt gcggccgacc
     3661 agaaaatcgg cgaccgcctc gatcggcttc tgcgtggccg acagtccgat gcgctgcacc
     3721 cggcggccga ccagagaatc gagccgagcg agcgacagcg ccaaatgact gccgcgcttg
     3781 ttaggcgcca aggcgtgaat ttcgtcgacg atcaccgttc gggtcgtgcg cagcatggcg
     3841 cggcccgttt ccgatccgag aagaatgtat agtgattccg g
//
LOCUS       DATMQB010000164        10293 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3466058, whole genome shotgun sequence.
ACCESSION   DATMQB010000164 DATMQB010000000
VERSION     DATMQB010000164.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10293)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10293)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10293
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3466058"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1074
                     /gene="metZ"
                     /locus_tag="VNY79_05055"
     CDS             <1..1074
                     /gene="metZ"
                     /locus_tag="VNY79_05055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016835 - carbon-oxygen lyase activity
                     [Evidence IEA];
                     GO_process: GO:0008652 - amino acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="O-succinylhomoserine sulfhydrylase"
                     /protein_id="HWX71846.1"
                     /translation="YDNSLQAERRFKNEDPGFQYSRFANPTVAMFEARMAAFEGAEAA
                     RATATGMAAVTLALTGQLKAGDHVVAAKALFGSCRYIVEDYLPRYGVPSTLVDGTDLD
                     QWRAAVRPNTKTFFLETPTNPTLDVIDIAAVAEIAHQAGATLVVDNVFATPIFQSPLA
                     LGADCVVYSATKHIDGQGRCLGGIILASEEFVQKHVHVLLRQTGPSLSPFNAWVLLKG
                     LETLPVRVRRQTDSAATLAVALVEHPKIARLIYPGRPDHPQAKIAQKQMRGGSTLVAF
                     DITGGKKAAFRFQDALKLIRISNNLGDAKSLITHPATTTHQRLTPAQRAELGISDGLV
                     RVSVGLEHPDDIVEDVLAALEEA"
     gene            complement(1176..2039)
                     /locus_tag="VNY79_05060"
     CDS             complement(1176..2039)
                     /locus_tag="VNY79_05060"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HWX71847.1"
                     /translation="MSVLSRVLLKYHTCAAMGAAALLLFAPARAQVPNSPANTAAPGA
                     AAALAVAGPSAFACSAPAEFSQLNYPLRHSARRLANGEPLTIVAIGSSSTTGVGASSP
                     AMSYPSRLAVELKQRFPGREITVLNRGVNGQETHEMVARFATDVIAAHPDLVLWQVGT
                     NSVLRDHPLRPHSVLLRDGIAQLKEAGTDVVLIDMQFVPRVIAKPETPGMEDQIALSA
                     KEQSVDLFRRFALMRNWHEVQHIPFETFVSPDELHMNDWSYACVAKLLAAAIAEAATR
                     PIASANARFGR"
     gene            complement(2039..2794)
                     /locus_tag="VNY79_05065"
     CDS             complement(2039..2794)
                     /locus_tag="VNY79_05065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GDSL-type esterase/lipase family protein"
                     /protein_id="HWX71848.1"
                     /translation="MIRIVAVLATIMLGYGAAAAESVPSCEVPESLIPADYELTRVAN
                     AIKDHRRLQITVVGSGSSALSGPDGARLAYPARVEEALRARLPGHEIAVTTHIQPRET
                     TAEMAAGLHKILAEDKPALVIWQAGTIDALHGVEPEDFHTSLDQGLDAIAAADADVIM
                     MNMQYSPRTESMLGVTAYADVMRWVAEQRSVLLFDRLAIMRYWSEEGTFDLYAATKDY
                     AMARRVHECIGRALASQIINGAHLDAENMQTNR"
     gene            complement(2791..3969)
                     /locus_tag="VNY79_05070"
     CDS             complement(2791..3969)
                     /locus_tag="VNY79_05070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011666253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OpgC domain-containing protein"
                     /protein_id="HWX71849.1"
                     /translation="MATASPAPSVTSERDLRLDLFRGVALWLIFLDHIPENVANWFTI
                     RNYGFSDATEIFIFISGYTAAFVYGRAMRERGFLLSSARILKRAWQIYVAHIFLFTIF
                     MAEIAYVAATFDNPLYAEEMKILDFLKQPDVTIFQALLLKFKPVNMDVLPLYIVLLLL
                     FPPMLQLLLRSPNFALAGSAVLYALTWKFDFNLPAYPNGVWFFNPFAWQLLFVFGAWC
                     ALGGAQRLAGVLRSRVVLAIAVAYLLFAFAITLTWRFEPLERLVPTWLSDLLYPIDKT
                     NLDVLRFAHFLALAAVTVRFVARDWPGLKSPFLLPAVRCGQHSLEIFCLGVFLAFAGQ
                     FIITQFSGGPLLQTSVSLLGILLMIAAASLLSWYKGIEGRSPTARVKARDADLAGGEA
                     "
     gene            4220..4612
                     /gene="apaG"
                     /locus_tag="VNY79_05075"
     CDS             4220..4612
                     /gene="apaG"
                     /locus_tag="VNY79_05075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Co2+/Mg2+ efflux protein ApaG"
                     /protein_id="HWX71850.1"
                     /translation="MYRAVTRSIEVVVTPRFIADRSSPEDNYFFWAYTIAITNHGAET
                     VQLKTRHWRITDANGRRQEVRGAGVVGEEPVLKAGESFEYTSGVPLQTPSGFMAGVYG
                     MVSASGENFEIEIPAFSLDSGNSKRTIN"
     gene            complement(4731..5222)
                     /locus_tag="VNY79_05080"
     CDS             complement(4731..5222)
                     /locus_tag="VNY79_05080"
                     /inference="COORDINATES: protein motif:HMM:NF024092.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HWX71851.1"
                     /translation="MSVIDKASLIEKSRETVEQIMARRGLARTYEEKAQYASDIVDMH
                     LHEENPERIDECIKLYTEDAVWETPARNVTYKGRENIKKMYLRIFNSMENITFHPIER
                     FSTPDRVFDDMLVTFRITGDGFENCPFPIGTKVKMRLLHNFHIRNGMIAKEIGYEIWG
                     RDD"
     gene            complement(5470..6501)
                     /locus_tag="VNY79_05085"
     CDS             complement(5470..6501)
                     /locus_tag="VNY79_05085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020508639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone"
                     /protein_id="HWX71852.1"
                     /translation="MNQPSVAIPVREPAQTGLDDTILPFEVETLDLRGRIVRLGPAVD
                     SILASHDYPLPVAKLLGEAIVLTVMLGSALKFDGRFILQTQSDGPVRMLVADFTTPGT
                     VRACARFDAERVAAAIAANAAAPGKLLGHGHLAMTIDQGPEMSRYQGVVPLDGNDLEH
                     AAREYFSRSEQIPTRVRLAVAEEFRAGDNGAQRRWRAGGILLQFLPKSVDRARQADLD
                     PGDAPPGTEPHTIAEDEAWVEGRSLVATVNDVELIDPALSSERLAYSLFHEHGVRVFR
                     AAPVQAQCSCSRQNVENMLKSFSAQDRDDMVESGRITVTCEFCSSTYVFAPDELAAGR
                     AGSSAGAGH"
     gene            complement(6560..7477)
                     /gene="argF"
                     /locus_tag="VNY79_05090"
     CDS             complement(6560..7477)
                     /gene="argF"
                     /locus_tag="VNY79_05090"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004585 - ornithine carbamoyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HWX71853.1"
                     /translation="MSAIRHFVDLVDVPARDLRRMIDDARAMKAKRLNGGRPLAGKTL
                     AMIFERPSTRTRVSFEVGMRQLGGDVIMLTAEEMQLGRGETIGDTARVLSRYVDVIMI
                     RALDADGVVELARHATVPVINGLTRRSHPCQVLADVMTFEEHRGPIRGRTVAWTGDAN
                     NVLTSWMHAAERFAFHLRVATPPELAPKKPLVEWVKSSGAAITVGTDPEEAVKGADCI
                     VTDTWVSMGDRNGARRHNLLRRYQVNARLMARAKPDAIFMHCLPAHRGEEVTDEVMDG
                     PHSVVFDEAENRLHAQKGILTWCLAANGR"
     gene            complement(7474..8703)
                     /locus_tag="VNY79_05095"
     CDS             complement(7474..8703)
                     /locus_tag="VNY79_05095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HWX71854.1"
                     /translation="MTSHLLPTYARVNLAFERGEGAWLFATNGDRYLDFTSGVAVNAL
                     GHAHPRLVAALAEQAHKVWHVSNLYEIPEAERVARRLCEASFADFVFFGNSGAEAMEC
                     AIKMARKYHFANGVPERYRIVTFEGAFHGRTLATLAATGQKKYLEGFGPAVEGFDQVP
                     FADLDAVKGAIGGETAAIAIEPIMGEGGVRVVEPAFLRALRELCDQHGLLLIFDEVQT
                     GMGRTGELFAYQRTGVSPDIMALAKALGGGFPVGACLATAEAAKGMTPGTHGSTFGFN
                     PLAMSVADAVLDVMLEPGFLERVQRIALLLKQRLAEIKDRHPAVIAEVRGEGLLIGLR
                     AVVPAGSLVDALRAEKMITVAAGDNVVRLLPPLIVSEEEIAEAIARLDRACTRLDRAA
                     SAAGSDGRGTGQGEARG"
     gene            9066..9563
                     /locus_tag="VNY79_05100"
     CDS             9066..9563
                     /locus_tag="VNY79_05100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GcrA family cell cycle regulator"
                     /protein_id="HWX71855.1"
                     /translation="MSWTDERVELLKKLWSDGLSASQIAAELGGITRNAVIGKVHRLG
                     LSGRAKSASAAAPRQRKARSSPHMLRMSRGSIRGNTALALAYDYEAEATPELIDNIIP
                     IGQRRSLLELTEQTCRWPIGDPGSSEFFFCGGNALTGLPYCAYHSRVAHQPASERRRE
                     RRALR"
     gene            complement(9645..>10293)
                     /gene="phoB"
                     /locus_tag="VNY79_05105"
     CDS             complement(9645..>10293)
                     /gene="phoB"
                     /locus_tag="VNY79_05105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0006796 - phosphate-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphate regulon transcriptional regulator
                     PhoB"
                     /protein_id="HWX71856.1"
                     /translation="RYNLEAEGYEVDAVARGDEADTRLRETTPALVVLDWMLPGLSGI
                     ELCRRLRARPQTQTLPIIMLTARGEESERIRGLATGADDYIVKPFSVPELLARIRALL
                     RRASPERVAMVLTIGDLELDREKKRVSRASRPIDLGPTEFRLLEYLMERPGRVFSREQ
                     LLDGVWGSEVYIDERTVDVHVGRLRKALNRGPGADPIRTVRGAGYALDDRFGKAS"
BASE COUNT         1817 a         3372 c         3390 g         1714 t
ORIGIN      
        1 tacgacaact cgctccaggc cgagcgccgg ttcaagaacg aggacccggg ctttcaatac
       61 tcgcgctttg ccaatccgac cgtcgccatg ttcgaggcgc gcatggcggc gttcgagggt
      121 gccgaagccg cgcgcgcaac agcaaccggc atggccgcgg tcaccctggc gctcaccggc
      181 cagctcaagg ccggcgatca cgtggtcgcg gccaaggcgc tgttcggctc ctgccgctac
      241 atcgtcgagg actacctgcc ccgctacggc gtgccttcga cactggtcga cggcaccgac
      301 ctcgatcagt ggcgcgccgc cgtgcggccg aacaccaaga ccttcttcct ggaaacgccg
      361 accaatccga cgctcgacgt gatcgacata gcagcggtcg cggagatcgc gcaccaggcc
      421 ggcgcgaccc tggtggtcga caacgtcttc gccacgccga tcttccagtc gccgctcgcg
      481 ctcggcgccg actgcgtggt ctattcggcg accaagcaca tcgacggcca gggccgctgt
      541 ctcggcggca tcatcctggc gtctgaagag ttcgtccaga agcacgttca tgtgctgctg
      601 cgccagaccg gcccgtcgct gtcgccgttc aacgcctggg tgctgctcaa gggattggag
      661 acgctgccgg tgcgcgtgcg ccggcagacc gacagcgcgg cgacgctcgc ggtagcgctg
      721 gtcgagcatc ccaagatcgc gcgcctgatc tatcccggcc ggcccgacca tccgcaggcg
      781 aagatcgcgc agaagcagat gcgcggcggg tcgacgctcg tcgccttcga tattacgggc
      841 ggcaagaagg cggcgttccg cttccaggac gcgctcaagc tcatccgcat cagcaacaat
      901 ctcggcgacg ccaagagcct catcacccat ccggcgacga ccacgcacca gcggctcacg
      961 ccggcgcagc gcgccgagct cggcatcagc gacggcctgg tgcgcgtttc cgtcggcctc
     1021 gaacatcccg acgacatcgt cgaggacgtg ctcgcagcgc tggaagaggc atgagcgcca
     1081 agctcctcag caggtcggca ctctcccact cgatcccgcg tacccgggaa tgagcgaaca
     1141 gtgcgccaac tcaatctgat tgtgttctaa aactactagc gcccgaaacg ggcgttagcg
     1201 gatgcgatcg ggcgcgtcgc cgcctcggcg atcgccgcgg cgaggagctt ggccacgcag
     1261 gcatagctcc agtcgttcat gtgcaattcg tccggcgaga cgaaggtctc gaaggggata
     1321 tgctgaacct cgtgccaatt gcgcatgagc gcgaagcggc gaaacagatc gacgctctgc
     1381 tccttggcgg agagcgcgat ctgatcctcc atgcccggcg tctccggctt ggcgatcacc
     1441 cgcggcacga actgcatgtc gatcagcacc acgtccgtgc ccgcttcctt gagctgcgcg
     1501 atgccgtcac gcagcaggac ggaatgcggc cgcagcggat gatcgcgcag cacggagttg
     1561 gtgccgacct gccagaggac gagatcgggg tgcgcggcga tgacgtccgt ggcgaaccgc
     1621 gccaccatct cgtgcgtctc ctggccgttg acgccgcgat tgaggaccgt gatctcgcgt
     1681 cccgggaacc gctgtttcag ctcgacggca aggcggctcg gatagctcat cgccggcgag
     1741 cttgcgccca cgccggtcgt cgaggacgag ccgatggcga cgatggtcag cggctcgccg
     1801 ttggcgagac gccgcgcgct atgccggagc ggatagttga gctgggagaa ttccgccggg
     1861 gcgctgcagg caaacgccga cggcccggca accgcgagcg ccgcggctgc acccggcgct
     1921 gcggtattcg ccggactgtt cggtacctga gcgcgcgccg gagcaaacaa cagcaatgcg
     1981 gctgcgccca ttgctgcgca ggtgtggtat ttgagtagca cgcgagagag aaccgacatc
     2041 aacgatttgt ttgcatattc tcggcgtcga gatgcgcccc attgatgatc tgcgacgcca
     2101 gggcccggcc aatgcattcg tgaacgcggc gagccatagc ataatccttg gtcgccgcat
     2161 agaggtcgaa agtcccctcc tcgctccagt agcgcatgat cgccaaacgg tcgaacaaca
     2221 agacgctgcg ctgctccgcg acccagcgca tgacgtccgc gtatgcagtg acgccgagca
     2281 tggattcggt gcgcgggcta tactgcatgt tcatcatgat cacatcggca tcggcggccg
     2341 cgatcgcatc gagaccctgg tcgagactgg tgtggaaatc ctcgggttcg acgccgtgca
     2401 aagcgtcgat cgtgccggcc tgccagatca ccagcgccgg cttgtcctcg gccaggatct
     2461 tgtgcaagcc cgcggccatt tcggcagtcg tctcccgcgg ctgaatatgc gtggttacgg
     2521 cgatctcgtg gccgggcagg cgcgctcgga gcgcctcctc gacgcgtgcc ggataggcaa
     2581 gacgcgcacc gtccggaccg gagagcgccg aggaccccga tcccacgacg gtaatctgca
     2641 agcggcgatg atcttttatc gcgttggcga cgcgcgtgag ttcgtagtcg gcgggtatga
     2701 gcgattccgg tacctcgcac gacggcaccg actccgccgc ggcggcgcca tagccgagca
     2761 tgatcgttgc cagcacagcg acgatccgga tcatgcctcg cctcccgcga ggtcggcgtc
     2821 acgggctttg acgcgcgcgg tgggacttcg tccttctatc cctttgtacc atgaaagcag
     2881 gcttgcggca gcaatcatga gcaaaatgcc taacaggctg accgacgtct gcagcagcgg
     2941 gccccccgag aactgggtga tgatgaattg gccggcaaag gcgagaaaca cgccgaggca
     3001 gaagatttcc agcgaatgct ggccgcagcg gaccgccggc agcaaaaatg gcgatttcaa
     3061 gcccggccaa tcccgcgcga cgaaacggac ggttactgcc gccagcgcga gaaaatgggc
     3121 aaagcgcagg acgtcgagat tggtcttgtc gatgggatac agcagatcgc tcagccaggt
     3181 cggcacgagc cgctcgagcg gctcgaaacg ccacgtcaag gtgatggcga aggcaaacaa
     3241 aagataggcg acggcgatcg cgagtaccac gcgggagcgc agcacgccgg caagccgctg
     3301 cgcgccgccg agcgcgcacc aggcgccgaa cacgaacagc aactgccagg cgaagggatt
     3361 gaagaaccat acgccgttcg gataggcggg caggttgaag tcgaacttcc aggtcagggc
     3421 gtagagcacg gccgagccgg ccagcgcgaa attcggcgag cgcagcagca actggagcat
     3481 gggcggaaac agcagcagca ggacgatgta gagcggcagc acgtccatgt tgaccggctt
     3541 gaacttcagc agcagcgcct ggaagatggt gacgtccggt tgcttgagaa aatcgaggat
     3601 tttcatttcc tcggcgtaca gcggattgtc gaaggtcgct gcgacatagg cgatctcggc
     3661 catgaagatc gtgaacagaa aaatgtgcgc cacgtagatc tgccacgcgc gcttgagaat
     3721 gcgcgcactc gacagcagga acccgcgttc gcgcatcgcc cggccgtaga cgaacgccgc
     3781 ggtgtagccg gaaataaaga tgaagatctc ggtggcgtcg ctaaacccgt agttgcggat
     3841 ggtgaaccag ttcgccacgt tttcgggaat atgatcgagg aagatcagcc acagggccac
     3901 gccgcggaac aggtcgagcc gcagatcgcg ttcgctggtg accgatggag ctggagaagc
     3961 cgtcgccatt ggccttgcaa ccattgcacc cgacccggcg gcctggacgt ttcccggcgt
     4021 gcgtgcggat tgtgggtgca ccagcaatct agtcgctcga atgtggcttg aggaagcgtc
     4081 cgcgcatcgt tattgcaacg ccgcgcttga ggctgttcac tggtgccgtc ggcgcggccc
     4141 ggcgccgagg ccggccgcga agaccgcgcc aacacctcgc ctggcggcac ggagcggagc
     4201 gagcatagga tttgcaccga tgtatcgtgc cgtcacccgc agcatcgagg tcgtggtgac
     4261 cccgcgcttc atcgccgacc gctcctcgcc ggaggacaac tatttctttt gggcctacac
     4321 catcgcaatc acaaatcacg gcgcggagac ggtgcagctc aagacccggc actggcgcat
     4381 caccgacgcc aacggccgcc gccaggaggt gcgcggcgcc ggcgtagtag gtgaggagcc
     4441 ggtgctcaag gccggcgagt cgttcgaata taccagcggg gtgccactgc agaccccgtc
     4501 cggcttcatg gccggggtct acggcatggt gagcgcgagc ggcgaaaatt tcgagatcga
     4561 aattcccgcc ttctcgctcg acagcggcaa cagcaagcgg accatcaatt gaggccgccc
     4621 tttgcgcttc gttccctgag cgctgtcgcg ctgggccgag gattgcgccc ggattcctca
     4681 ggggcgcatg atttcgcagg cccggtagcg gaccgtcccg acgatgccga tcaatcgtcc
     4741 cgcccccaga tctcgtagcc gatttccttg gcgatcatgc cgttgcggat atgaaagttg
     4801 tgcaggagcc gcatcttgac cttggtgccg atcgggaacg gacagttttc gaagccgtcg
     4861 ccggtgatgc ggaaggtgac cagcatgtcg tcaaacacgc ggtcgggcgt ggaaaagcgc
     4921 tcgatcgggt ggaaggtgat gttttccatg gaattgaaga tgcgaaggta catcttcttg
     4981 atgttctcgc gccccttgta ggtcacgttg cgcgcgggcg tctcccagac cgcatcctcg
     5041 gtatagagct tgatgcattc gtcgatgcgc tcgggattct cctcgtgcaa gtgcatatcg
     5101 actatgtcgg aagcgtattg ggccttttcc tcgtaggtcc tggccaatcc gcggcgagcc
     5161 atgatctgct caaccgtctc gcgggatttt tcgatcaggc tggccttgtc gatgacgctc
     5221 atatttcgtg ctctcctgct ctggtcctgc gcgtccgcgc gatggcactg cgcgtattga
     5281 tcgtgtcgcc gccgatccgg aaacgagcgt gccgcgcaga attcgcagac ttctatcgcc
     5341 cgccgaagtt tatgcgcatt tgaaaaggcc gtccaccgct gggcggcgat ccggtacgct
     5401 cggcgcgatc gaagacggtc catccaagaa gacggcgccg aaccatcgat ccgccgcggc
     5461 agcgcagcct caatggccgg caccggcgga cgagcctgcg cgcccagccg ccaattcatc
     5521 aggcgcgaac acgtaggtgg aactgcagaa ctcgcaggtc accgtgatcc tgccgctctc
     5581 caccatgtcg tcgcggtcct gcgcggagaa gctcttgagc atgttttcga cgttctgccg
     5641 ggagcacgag cactgcgcct gtaccggcgc ggcgcggaag acgcgcacgc cgtgctcgtg
     5701 aaacagactg taggccaggc gttcgctcga caatgccgga tcgatcagct cgacgtcgtt
     5761 gacggtggcg accagcgaac ggccctccac ccaggcttcg tcctcggcga tcgtgtgcgg
     5821 ctcggtgccg ggcggagcgt cgccgggatc gagatcggcc tggcgcgccc ggtcgaccga
     5881 cttgggcagg aactggagca aaatgccgcc ggcgcgccag cgtcgctggg ccccgttgtc
     5941 gccggcgcgg aactcctccg cgaccgcgag ccgcacccgg gtggggatct gttcggagcg
     6001 cgaaaagtat tcgcgcgcgg catgttcgag atcgttgccg tcgagcggca ccaccccctg
     6061 gtagcggctc atctccggac cctggtcgat ggtcatggcg agatggccgt ggccgagcag
     6121 cttgcccggc gcggccgcat tggcggcaat cgccgccgcg acacgctcgg catcgaagcg
     6181 cgcgcaggcc cgcaccgtgc cgggcgtggt gaagtcggcg accagcatgc gcaccgggcc
     6241 gtcgctctgg gtctgcagga tgaagcggcc gtcgaactta agcgcggagc ccagcatgac
     6301 ggtgagcacg atcgcctcgc cgaggagctt ggcgacgggc aagggatagt catggctggc
     6361 caggatggag tcgaccgccg gccccagccg cacgatgcgg ccccgcaggt cgagcgtctc
     6421 gacttcgaac ggcaggatcg tgtcgtcgag gccggtttgc gccggctcgc gaaccgggat
     6481 ggcgacgctg ggttggttca ttgccgtgaa tataggacgc cgccgcctac ttgtgagccc
     6541 tcacgcgcac ggcgccggct caacggccat tcgccgccag gcaccaggtc agaatcccct
     6601 tctgcgcgtg caggcggttc tcggcctcgt cgaacaccac cgaatgcggg ccgtccatca
     6661 cctcgtcggt aacctcctcg ccgcgatgcg cgggcaggca atgcatgaag atggcgtctg
     6721 gcttcgcgcg cgccatgagc cgcgcattga cttgatagcg ccgcagcaga ttgtgacggc
     6781 gggcgccatt gcggtcgccc atcgacaccc aggtgtcggt gacgatgcag tcggcgccct
     6841 tcacggcctc ttcggggtcg gtaccgacgg taatcgcggc gcctgaggat ttgacccact
     6901 cgacgagcgg tttcttcggc gccagctccg gcggcgtggc gacgcgcagg tgaaacgcga
     6961 agcgctcggc ggcgtgcatc cacgacgtga gcacgttgtt ggcgtcgccg gtccaggcca
     7021 cggtgcgccc gcggatcggg ccgcgatgct cctcgaaggt catgacatcc gccagcacct
     7081 ggcacggatg cgagcgccgc gtgaggccat tgatgaccgg caccgtggca tggcgcgcca
     7141 gttccaccac gccgtcggca tcgagtgccc ggatcatgat gacgtcgacg tagcgcgaca
     7201 acacgcgggc cgtatcgccg atcgtctcgc cgcggccgag ttgcatctcc tcggccgtga
     7261 gcatgatgac gtcgccgccg agctggcgca tgccgacctc gaatgaaacg cgagtgcgcg
     7321 tggaaggccg ctcgaaaatc atcgccagcg tcttgccggc aagcggacgg ccgccgttga
     7381 ggcgcttggc cttcatggcg cgggcgtcgt cgatcatgcg gcgcaggtca cgggccggaa
     7441 cgtcgacgag atcgacgaag tgccggatcg cgctcatccg cgcgcctccc cctgacccgt
     7501 tcccctcccg tcactgccgg cggcggaggc tgcacggtca agccgcgtgc aggcgcggtc
     7561 gaggcgcgca atcgcctcgg cgatttcctc ctcgctgacg atgagcgggg gcagcaggcg
     7621 cacgacgttg tcgccggcgg cgacggttat catcttctcg gcgcgcagcg cgtcgaccag
     7681 ggagccggcc ggcaccacgg cgcgcaggcc gatcagcaat ccctcgccgc gcacctcggc
     7741 gatcaccgcc ggatgacgat ccttgatttc cgcgagccgc tgcttgagca gcagcgcgat
     7801 ccgctgcacg cgttcgagaa aaccgggctc gagcatcacg tcgagcacgg cgtcggcgac
     7861 gctcatcgcc agcggattga agccaaaggt cgagccgtgc gtgccgggag tcattccctt
     7921 ggccgcctcg gccgtcgcca ggcacgcccc gacggggaaa ccgccgccga gcgccttggc
     7981 cagcgccata atgtcggggc tgacgccggt gcgctggtag gcgaacaatt cgccggtgcg
     8041 gcccattccg gtctgcacct cgtcgaagat cagcagcaag ccgtgctggt cgcaaagttc
     8101 gcgtagcgcc cgcagaaacg ccggctcgac cacgcgcacg ccgccctcgc ccatgatcgg
     8161 ctcgatcgcg atcgccgcgg tctcgccgcc gatcgcaccc ttcaccgcgt cgagatcggc
     8221 gaacggcacc tgatcgaatc cctcgaccgc cgggccgaaa ccttcgagat atttcttctg
     8281 cccggtggcg gcgagcgttg ccagcgtgcg gccgtggaag gcaccctcga aagtgacgat
     8341 ccggtagcgt tccggaacgc cgttggcgaa gtggtatttg cgcgccatct tgatcgcgca
     8401 ttccatcgcc tcggcgccgg aattgccgaa gaagacgaag tcggcgaagc ttgcttcgca
     8461 cagccgccgt gccacgcgtt cggcttccgg aatctcatag aggttggaga cgtgccagac
     8521 cttgtgcgcc tgctcggcga gcgcggcgac aaggcgcgga tgtgcgtgtc cgagcgcatt
     8581 gaccgcgacg ccggaggtga aatcgagata gcggtcgccg ttggtcgcga aaagccaggc
     8641 gccctcgccc cgctcgaagg caaggttcac gcgcgcatag gtcggcaaca aatgcgatgt
     8701 cacggcaaga cccgtggatg ctgcgcacaa aggcggcgca gcaaacaaaa ttgccgccct
     8761 ccgggcggca ccatttgcta tcttatttcc atacgcccgt ctgtcaactg aggatgacgc
     8821 ccgccgcacc tggagttttc acccgtatca tccacatagg ggacaggaat atgtggacgc
     8881 attccgcccg actcttgcgc ccgactcccg ccatattgta cccttttgat cgtccggtac
     8941 gacatctcgt gcggcggact gtcttctaaa gcgttggtga cagtgcgtgt tgggcggcgc
     9001 ggcgctgccc ggccgaatgg gggattccat caagctttag cccgcctctt tgaggaggat
     9061 tgagcatgtc gtggacagac gagcgggtcg agctcctgaa aaagctctgg tccgacggtc
     9121 tttcggcgag ccaaatcgcg gccgagctcg gcggtatcac gcgcaacgcg gtcatcggca
     9181 aggtgcatcg gctcggcctg tcgggccgcg ccaagagtgc atcggcggct gcgccgcgcc
     9241 agcgcaaggc gcgctcgtcg ccgcacatgc tgcgcatgtc ccgcggctcg atccgcggca
     9301 acaccgcgct ggccctcgcc tacgactacg aagcggaggc gacgccggag ctgatcgaca
     9361 acatcatccc gatcggccag cggcggagtc tcttggagct gaccgagcag acctgccgct
     9421 ggccgatcgg cgatcccggc agcagcgaat tcttcttctg cggcggcaat gcgctcaccg
     9481 gccttcccta ttgcgcgtac cactcgcggg tcgcccatca gccggcgtcc gagcgccgcc
     9541 gcgagagacg cgcgctgcgg tgaggcctca tcccgcatcg cgtcgccggg gtgccggcgc
     9601 acagtgggcc tcgagtctcc cgtcgagacg gctgcgatgg tctttcagct cgccttgccg
     9661 aaacggtcgt cgagcgcgta gccggcgccg cgcacggtgc ggatcgggtc ggcgcccggg
     9721 ccgcggttga gcgccttgcg caggcgaccg acgtgcacgt cgaccgtgcg ctcgtcgata
     9781 tacacttcgc tgccccagac gccgtcgagc agctgctcgc gtgagaacac ccgtcccggg
     9841 cgctccatca gatattcgag caggcggaat tcggtggggc cgagatcgat cggacggctg
     9901 gcgcgcgata cgcgcttctt ctcgcgatcg agttcgagat cgccgatggt gagcaccatg
     9961 gcgacacgtt cggggctggc ccggcgcagc agcgcacgga tgcgggcgag cagttccggg
    10021 accgagaacg gcttgacaat atagtcgtcg gcccccgtgg cgagcccacg gatccgttcg
    10081 ctctcctcgc cgcgtgcggt gagcatgatg atcggcagcg tttgcgtctg cggccgcgcc
    10141 cgcaaccggc gacacagttc gattccggac aggccgggga gcatccagtc gagcaccacg
    10201 agagccggcg tcgtctcgcg caagcgggta tcagcctcgt cgccgcgggc gacggcgtcc
    10261 acctcgtatc cttcggcctc gaggttgtag cgc
//
LOCUS       DATMQB010000165         4681 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2528638, whole genome shotgun sequence.
ACCESSION   DATMQB010000165 DATMQB010000000
VERSION     DATMQB010000165.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4681
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2528638"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(80..682)
                     /locus_tag="VNY79_05110"
     CDS             complement(80..682)
                     /locus_tag="VNY79_05110"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HWX71857.1"
                     /translation="MAFTLPDLPYPHDALAPHMSRETLEFHHDKHHQAYVTAGNNLAK
                     GTEWENKPVEEVVKGTYGKNQALFNNAGQHYNHIHFWKWMKKGGGGDKLPGKLEKQIT
                     SDIGPIAKLKEDFVQAGVTQFGSGWCWLAVKDGKIAVMKTPNGENPLVHGAQPILGCD
                     VWEHSYYIDYRNRRPDYLKAFLDHLVNWDHVAEMYEQATK"
     gene            1061..1897
                     /locus_tag="VNY79_05115"
     CDS             1061..1897
                     /locus_tag="VNY79_05115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF308 domain-containing protein"
                     /protein_id="HWX71858.1"
                     /translation="MTSAAGFSLVAMGVAQEGVSAVTPGIIAAVGGLVLIGLGVLVRE
                     LQRIERALAARPMPRATRPPEAPVAIPPTPAERPSPQARIPFPPRPKPGAIGPAPSDD
                     GSLPRPRERFPRLEPALAAEEPDVSMLPRALARAEDDVGEVRSVAAGGAGGGAGPAAR
                     LAARLNASPRPAAPPQRERPRGSVFDAFWPKGQRRRDAPAAPGPQSWPSAEPVPSEPS
                     PEMPPSVGEPSAPVTVLKSGTVEGMAYTLYSDGSIETQLPQGMVRFGSITELRNHIEN
                     ES"
     gene            complement(1892..4054)
                     /locus_tag="VNY79_05120"
     CDS             complement(1892..4054)
                     /locus_tag="VNY79_05120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HWX71859.1"
                     /translation="MRPQFPSQGHAGAPGEPRAQQRPSVRTLHGVDLHDEFGWLKATN
                     WQEVMRDPEKLDPAVRAYLQEENDYCERALADTAALQATLFAEMKGRVKEDDSTVPDP
                     DGPFAYYVRYRKEGQHPLLCREPRHALLLAAEPAEEHAGEQLLLDGDALAQGKPFFRL
                     GATQHSPDHRLFAWLADEAGSELYTARVRVIDSGADIADVVPDVSGAVVWTQDASAFY
                     YVRLDQNHRPAGVFRHRLGTPVSADTCVLPAPDPGLFLSVGSHAANRFGDISAHDHET
                     SEVWLLDLAAPDALPTLVAARETGVQYEIEHHPDFNGGPALIIRTNTDGAEDFKIAWT
                     PLTTPGREHWRDLVPHHAGVYMLSFVLLRDWLVRLEREDGLPRIVVRRLDSGEEHLIA
                     FAEDAYSLSIEAGYEFATDVLRFTYSSMTTPAEVWDYDLATRERTLRKRQEIPSGHDP
                     ADYVTRRVFAPAADGESVPISLLHRKDVIPGRDTPCLVYGYGAYGLSIPAAFSTNRLS
                     LVDRGFVYAIAHVRGGSEKGWRWYREGKLAKKPNTFSDFIAATEYLIGNGWTGRGRIV
                     AQGGSAGGTLIGAIGNMRPDLYGGLIAEVPFVDVLNTMLDEMLPLTPPEWPEWGDPIR
                     DAAAFQTILGYSPYENVRAQDYPAILALAGLADPRVLYWEPAKWIAQLRRLRTDRNLI
                     AFRTNLDAGHAGAAGRFDRLKEVALAYAFAIKVADATL"
     gene            4369..>4681
                     /locus_tag="VNY79_05125"
     CDS             4369..>4681
                     /locus_tag="VNY79_05125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018456864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucR family transcriptional regulator"
                     /protein_id="HWX71860.1"
                     /translation="MADNPGESSYIQLTANIVSAYVSNNTVPSAEIPNLIGQIHSALL
                     RVSGGQAPTPAEPLKPAVPLKRSITSDYLVCLEDGKKFKSLKRHLRTQYGMTPEQYRE
                     KW"
BASE COUNT          798 a         1471 c         1574 g          838 t
ORIGIN      
        1 gttgaggccg tttcgcggcg cccgagcgca aaaagcggga ccggcgggtc ccgcttacgt
       61 agcccgtgac cgcaccgtgc tatttcgtgg cttgctcgta catctcggcc acatggtccc
      121 aattcaccag gtggtcgagg aacgctttga ggtagtccgg ccggcggttg cggtaatcga
      181 tgtagtacga atgctcccag acgtcgcagc cgaggatggg ctgggcgccg tgcaccagcg
      241 ggttctcgcc gttcggcgtc ttcatcaccg cgatcttgcc gtccttgacc gcgagccagc
      301 accagcccga cccaaactgc gtgacgccgg cctggacgaa gtcctccttc agctttgcga
      361 tcggtccgat atcgctggtg atctgcttct cgagcttgcc gggcaacttg tcgccgccgc
      421 cgcccttctt catccatttc cagaagtgga tgtggttata gtgctggccg gcattgttaa
      481 agagagcctg gttcttgccg tacgtgcctt ttacgacttc ctcgaccggc ttgttctccc
      541 attcggtgcc tttggccagg ttgttgccgg cagtgacgta cgcctggtga tgtttgtcgt
      601 gatggaattc gagcgtttcg cgggacatgt gcggtgcaag cgcgtcgtgg ggatacggaa
      661 ggtcaggcag ggtgaatgcc attggtctac tcctcaatgt gaaactgaac cgggccggcg
      721 tgcccgtgaa accgccgaac gaagaaaagg gttcccctaa attggcccaa tcccgggggc
      781 ggagcaacgc ccgcctaccc ccggcgggtc gctcgggacg ttcgccgggg cggcactgcc
      841 gtttaccata cttgtccaag cgtcaccgaa ctttccagcg cttgccgcgc tgcggcgaac
      901 gtcaaaaaac gacgtgcggc aagcacgttg caggcaaaag gaagattaaa aacttgcgtg
      961 ttgtcgagat ggcggccaaa atggcgttgt ttgtggccgc cgccgtctga tcggggcagg
     1021 ggacgggcgt atgtacttat ttttgttggt attgggtgcg ttgaccagtg ccgcaggttt
     1081 ttccctcgtg gcaatgggcg tcgcccaaga aggtgtctcc gccgtcacgc ctggcattat
     1141 tgccgccgtg ggcggacttg ttttaatcgg actcggcgtg ctggtgcgcg agctgcagcg
     1201 catcgagcgc gcactggcgg cgcggccgat gccgcgcgcg acgcgtcccc ccgaggcgcc
     1261 tgttgccatt cctcccacac cggccgaacg gccgagcccg caggcccgca tcccattccc
     1321 gccgcggccg aagcccggcg cgatcggccc ggcgcccagc gacgacgggt cacttccgcg
     1381 gccgcgggaa cggttcccgc gcctcgagcc cgcgctcgct gcggaggaac cggacgtatc
     1441 gatgctgccg cgcgccctgg cccgcgctga ggatgatgtg ggtgaggtca ggagcgtcgc
     1501 cgcgggcggc gccgggggtg gtgccgggcc ggcggcgcgc ctggcggcgc ggctcaacgc
     1561 cagccctcgc ccagctgctc ctcctcaacg tgaacggccg aggggctcgg tattcgacgc
     1621 gttttggcca aaggggcagc gccggcggga cgcgcccgcg gccccgggtc cgcaatcgtg
     1681 gccttcggcc gagccggtgc cgagcgaacc gtcaccggaa atgcctccgt ccgtcggcga
     1741 gccgtcggct ccggtcacgg tgctcaagtc gggcacggtc gagggaatgg cctacacgct
     1801 ttattccgac ggttcgatcg agacgcagct tccgcaaggc atggtgcggt tcggctcgat
     1861 caccgaactg cgcaatcaca tcgaaaacga atcatagcgt cgcgtccgcg accttgatcg
     1921 caaaggcgta ggcgagcgct acctccttga ggcggtcgaa ccggccggca gcgccggcgt
     1981 gtcccgcatc gagattggtg cgaaaggcga tgaggttgcg gtcggtgcgc agccggcgca
     2041 gctgcgcgat ccacttggcc ggctcccaat agaggacgcg cgggtcggcg aggcccgcca
     2101 gtgcaaggat cgccggatag tcctgtgcgc ggacgttctc gtaaggcgaa tagccgagga
     2161 tggtctggaa cgcggctgca tcacggatcg ggtcgcccca ttccggccat tccggcggcg
     2221 tcagcggcaa catctcgtcg agcatggtgt tgagcacgtc gacgaacggc acctcggcaa
     2281 tcagaccgcc gtagaggtcc ggccgcatat tgccgatcgc gccgatcaag gtgccgccgg
     2341 cggaaccacc ttgcgcgact atccgcccgc ggccggtcca gccgttgccg atcaggtatt
     2401 cggtcgcggc gatgaaatcg ctgaaggtgt tcggcttctt cgcgagcttg ccttcgcggt
     2461 accagcgcca gcccttctcg ctgccgccgc ggacatgggc gatggcatag acgaagccgc
     2521 gatcgaccag cgacagccgg ttggtactga acgccgcagg aatcgagagg ccgtaggcgc
     2581 cgtagccgta tacgaggcag ggcgtgtcac ggccggggat tacgtccttg cggtgcagga
     2641 gcgagatcgg cacgctctcg ccgtccgcgg ccggcgcgaa tacgcgccgc gtgacgtagt
     2701 cggcagggtc gtggccgctt gggatctcct gacgcttgcg caacgtgcgc tcgcgggtcg
     2761 cgagatcata gtcccagacc tctgcggggg tggtcatcga ggaataggtg aaacgcagga
     2821 cgtcggtggc gaactcgtaa ccggcctcga tgctcagcga ataggcgtct tccgcgaagg
     2881 cgatgaggtg ctcctcgccg ctgtcgagcc ggcgcacgac gatgcgcggc aagccgtcct
     2941 cgcgttcgag ccggacgagc cagtcccgca gcagtacgaa cgacagcatg tagactccgg
     3001 cgtggtgcgg cacgaggtcg cgccaatgtt ctcggccggg tgtcgtcagc ggcgtccacg
     3061 cgatcttgaa gtcctccgca ccgtcggtat tggtgcggat gatcagggcc ggcccgccgt
     3121 tgaagtccgg atggtgttcg atttcatatt ggacgccggt ctcgcgcgcc gcgacgagag
     3181 tcggcagcgc gtccggcgcg gcgagatcga ggagccagac ctcggacgtc tcatggtcgt
     3241 gcgccgagat gtcaccgaag cggttggcag cgtggctgcc gaccgagagg aaaaggcccg
     3301 ggtcgggcgc cggcagcacg cacgtgtcgg cgctcaccgg cgtccccagg cgatggcgaa
     3361 atacgccggc cggccggtgg ttctgatcga gccgcacgta gtagaaggcc gaggcatcct
     3421 gcgtccacac caccgcaccg gagacgtcgg ggacgacatc ggcgatgtcg gcgccgctgt
     3481 cgatgacgcg gacgcgcgcc gtataaagtt ccgacccggc ctcgtcggcg agccaggcga
     3541 acagacggtg gtcgggcgaa tgctgggtag cgccgagccg gaagaacggc ttgccctggg
     3601 cgagggcgtc tccgtcgagc aggagttgct ccccagcgtg ttcctccgcc ggctcggctg
     3661 cgaggagtaa cgcatgccgc ggctcccggc acagcagcgg gtgctgcccc tccttgcgat
     3721 agcgcacgta ataggcgaag ggcccatcgg gatcgggcac ggtggaatcg tcctctttga
     3781 cccgtccctt catttccgcg aacagcgtcg cttgcagcgc cgcggtatcg gcgagcgcgc
     3841 gctcgcaata gtcattttcc tcctgcagat aagcgcggac ggccggatcg agcttttccg
     3901 gatcgcgcat gacctcctgc cagttggtgg ctttgagcca gccgaactcg tcgtgaaggt
     3961 ccacgccatg gagggtgcgc acggaaggcc gctgctgcgc gcgcggttcg ccgggcgctc
     4021 cggcatgccc ctgcgatgga aattgcggcc gcattcgaat ccaatcctag tgctagacct
     4081 cggggtggag gggcaagtca cgatgccgcg atgcatacgg cgacaggacg ggccgcgtcg
     4141 gcctccgacg cgcgggccct cccttggata gtttcgccgc tcaactattt caacctcgcg
     4201 caattctgta tagcgggaaa ataagcttgt atattcacgt tctgatccaa catggactac
     4261 cggtttgttg ctttaattct tgaaacgcta tataggctag acttgccagc atgacgggca
     4321 aagcggggcg cttctcgacg aaaatcagag cagaagaccg gaccgaagat ggccgacaat
     4381 ccaggcgaga gcagctatat tcaactgacg gcgaacatcg tctccgccta cgtgagcaac
     4441 aacacggttc cgagcgcgga gataccgaac ctgatcggcc agattcattc ggcgctgctg
     4501 agggtctccg gcggtcaggc gccgacaccg gcggagccgc tcaagccggc cgtgccgctc
     4561 aagcgatcca tcacgtccga ctatcttgtc tgccttgagg acgggaaaaa attcaagtcg
     4621 ctcaagcgtc acctgcgcac acagtacggc atgacgccgg agcagtatcg cgagaaatgg
     4681 g
//
LOCUS       DATMQB010000166         2180 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2843557, whole genome shotgun sequence.
ACCESSION   DATMQB010000166 DATMQB010000000
VERSION     DATMQB010000166.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2180)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2180)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2180
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2843557"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..833)
                     /locus_tag="VNY79_05130"
     CDS             complement(<1..833)
                     /locus_tag="VNY79_05130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity EipB family protein"
                     /protein_id="HWX71861.1"
                     /translation="MIPVFASRSAGLAVVLVLAVPAPAMRAQESPITLAPHRAVYDLA
                     LARTRGNSQIAAVRGRILYDFNGNACEGYSLQFRQVSELDSGEGKVSTSDLRSTTWEG
                     GDAKSFKFSSENFLNQNLVDTVDGHAEHGTGATAVSLVKPKERALDLDAGVVFPTQQM
                     VRVIEAARAEKTILDFPVYDGSDNGDKVYNTLTVIGHKLAPDERKHADAASDEPKLAA
                     VARWPVTVSYFDKSKKTKSGEETPVYAINFELYENGISRALSLDYNEFVVTGKLTSLE
                     I"
     gene            1024..1488
                     /locus_tag="VNY79_05135"
     CDS             1024..1488
                     /locus_tag="VNY79_05135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015685590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HWX71862.1"
                     /translation="MAGNIEKKLSELGIVLAPPAAPVANYVPCVRTGNLLMVSGQICL
                     DDGKLVAKGQLGAGVSVEDGQKAARACAINLLAQVKAAVGDLDKVARVVRLGGFVNSA
                     PGFLDGPKVMNGASDVMVAVFGEKGKHARTTVGVAALPLDAAIEVEALFEVS"
     gene            1492..>2180
                     /locus_tag="VNY79_05140"
     CDS             1492..>2180
                     /locus_tag="VNY79_05140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008081 - phosphoric diester hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006629 - lipid metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase family
                     protein"
                     /protein_id="HWX71863.1"
                     /translation="MATAPEWLTARPIAHRGLHDAAGGLIENTAGAVRAAIDGAYGIE
                     VDLQLSADGEAMVHHDDVLGRLTDGAGRLDRMTAAALQRVPFRDSAERMLTLGELCDL
                     VAGRAAMLLELKSRFDGDSRLPARVAAVLAGYHGAVAPMSFDPRQLNVLRHKSPRLPR
                     GIVAAKYRPHPYWDRMPPWLRYGMGSLLPSLTARPLFVAYAVGDLPALAPLAARHILC
                     LPLLTWVVRTAP"
BASE COUNT          339 a          716 c          723 g          402 t
ORIGIN      
        1 ttgatctcca gcgaggtaag tttgccggta acgacgaatt cgttgtagtc gagcgacagc
       61 gcgcgcgaaa tgccgttttc gtaaagctcg aagttgatcg cataaaccgg cgtttcctcg
      121 ccgcttttcg tcttcttgct cttatcgaaa tagctgaccg tcaccggcca gcgcgcaacc
      181 gccgcaagct tcggctcgtc gcttgcggcg tcggcgtgct tgcgctcgtc cggcgcgagc
      241 ttgtgaccga tcacggtgag cgtgttgtag accttgtcgc cgttgtcgga gccgtcatag
      301 accgggaaat caagaatggt cttttcggcg cgggccgcct cgatcacgcg caccatctgc
      361 tgggtcggga acacgacgcc ggcgtcgagg tcgagcgccc gctccttcgg cttcacgaga
      421 ctgacagcgg tcgcgcccgt gccatgctcg gcatggccgt cgacggtatc gacgagattc
      481 tggttgagga aattttccga gctgaacttg aagctcttgg cgtcgccgcc ctcccaggtc
      541 gtcgagcgca gatcgctggt cgataccttg ccttcgccgc tgtcgagctc cgatacttgg
      601 cggaactgca gcgaatagcc ttcgcaggcg ttgccgttga aatcgtagag tatccggccg
      661 cgcacggcgg cgatctgtga gttgccgcgg gtccgggcga gcgcgaggtc gtacacggcc
      721 cgatgcggcg cgagcgtgat cgggctctcc tgtgcacgca tcgccggcgc cggcacagcc
      781 aggacgagaa cgacggcaag cccggcgctg cgcgatgcga agacgggaat cacaggtgaa
      841 cctctctcgc tctgctcgat cctgatttgc ccaccccctc ggtagtgcgc cggatagcat
      901 catgtccgct ggatggcggc gaagataggg tccggccccg aaggctgcaa ctgcggatcg
      961 tcgctcactc cgtgtgttat gctgcgaggt ctgaagtccg aaccagcagc ctggaggatg
     1021 cgaatggccg gaaacattga gaaaaaattg agcgagctcg gtattgtgct cgcgccgccg
     1081 gccgctccgg tcgccaacta cgtcccctgc gtgcgcaccg gcaatttgct catggtgtcc
     1141 ggccagatct gcctcgacga cggcaagctt gtcgccaagg gccaactggg cgccggggtt
     1201 tccgtcgagg acgggcaaaa agcggcgcgc gcctgtgcga tcaatctgct cgcccaggtc
     1261 aaggccgccg tcggcgatct cgacaaggtg gcgcgggtgg tgcggctcgg cggcttcgtg
     1321 aactcggcgc cgggcttcct cgacggcccg aaggtgatga acggcgcttc cgacgtgatg
     1381 gtcgccgtct tcggcgagaa gggcaagcac gcgcgcacga ccgtcggcgt cgccgcgctc
     1441 ccgctcgatg cggccatcga ggtcgaggcc ctgttcgaag tgtcttgaac ggtggcgact
     1501 gcgcccgagt ggctgaccgc acggccgatc gcccatcgcg ggctgcacga tgccgccggc
     1561 ggcctgatcg agaacaccgc cggcgccgtg cgcgcggcga tcgatggcgc ctacggcatc
     1621 gaggtcgacc tgcaactcag cgccgacggc gaggcaatgg tgcaccacga cgacgttctc
     1681 ggtcgcctca ccgacggcgc gggacggctc gaccggatga ccgcggccgc gctacaacgc
     1741 gtcccgttcc gcgacagcgc cgagcgcatg ctcaccctcg gcgaactttg cgatctggtc
     1801 gccggacgcg ccgccatgct gctcgagctg aaaagccgtt tcgacggcga cagccgcctc
     1861 cccgcccgcg tggcggcggt cctcgccgga tatcacggcg cggtcgcccc gatgtcgttc
     1921 gatccgaggc agctcaacgt gctgcggcat aaatcccctc gcctgccgcg cggaattgtt
     1981 gcagcaaagt accggccgca cccttattgg gatcggatgc caccctggct gcgttacggc
     2041 atgggttcgc tgctgccgtc cttgacggcc cggccgcttt tcgtcgctta tgcggtcggc
     2101 gacctgccgg cgttggcgcc gctcgctgcg cggcacattt tgtgcctgcc gctgctgacc
     2161 tgggtggtgc ggacagcgcc
//
LOCUS       DATMQB010000167         3681 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1294933, whole genome shotgun sequence.
ACCESSION   DATMQB010000167 DATMQB010000000
VERSION     DATMQB010000167.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3681
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1294933"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..316
                     /locus_tag="VNY79_05145"
     CDS             <1..316
                     /locus_tag="VNY79_05145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HWX71864.1"
                     /translation="KAVPFVSDFFDFSVYLDADEGVLLSWYVDRFLALRGTAFADPKS
                     YFHRYAQLSDAEAIATATSIWNRINLVNLRENILPTRPRADLILKKGESHEVEEVALR
                     RL"
     gene            complement(430..2634)
                     /locus_tag="VNY79_05150"
     CDS             complement(430..2634)
                     /locus_tag="VNY79_05150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HWX71865.1"
                     /translation="MRPRGHLPKPAVFSRRLLSLAVRSVAIASMSFAAAFGFLSGATS
                     PGAHYDPHTFAIGVSALLGAACGGIGILISRIRQMKIELRDMETRLDEAADRNWEISE
                     AQERTKSFFETQGDVIVRRGSAGAITYANDAFCALAGRTREDILATAFALPVEEQGET
                     TSLADGTRIYDQKIAAPAGARWIAWREVAVRAGSASETQSVGRDVTGRVLAERALAEA
                     RDQAETASRAKSRFLAMVSHEIRTPLNGILGMADLIGDTPLTPEQAAYLKAVRTSGET
                     LLSLIEEILDFSKIEAGRIDLAARPFVLAAFVEEAVELLGPRAQAKGLEICCYVDERL
                     PVRVVGDAARLRQVLFNLADNAIKFTDRGGVSIIVEPDTQPDAIAISVRDTGIGISGD
                     DQARIFAEFEQADGGSARKYGGTGLGLTISKRIIESMGGTIAIESIPGAGATFRVSIP
                     LARFGDTDEPGLPVPDLAGHDVLIVAPAAIEASLIARRLQRWGARTAIVPDDEVASAV
                     LPERPWSAVLVDHAPGTAQSEVLARLAATVPRRIVLVTPAMRPELAALKEAGFTSYLI
                     RPVRATSLAARFSADDAFEPAAPEPKEAPSEVRTDGSLSILVAEDNEINALLARALLT
                     KLGHRPTMAADGVAAVESFLAARAAGTPYDRVLMDLHMPGMDGIEATRRIRAIEAEQE
                     APRTPILALTANASAEDRDACLAAGMDGFLVKPLDRERLSAALAGGAAALAA"
     gene            2982..3641
                     /gene="folE"
                     /locus_tag="VNY79_05155"
     CDS             2982..3641
                     /gene="folE"
                     /locus_tag="VNY79_05155"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003934 - GTP cyclohydrolase I activity
                     [Evidence IEA];
                     GO_process: GO:0042559 - pteridine-containing compound
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0046654 - tetrahydrofolate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HWX71866.1"
                     /translation="MDKLVNSKRSRGGVAAPSRAVRPAREEAEDAVRTLIRWAGDDPD
                     REGLRGTPGRVVRAYEEWFAGYKDHPRDYLKRTFEETGGYDEVVVLRDIRFESHCEHH
                     MAPIIGRVHIGYLPRNRVVGISKLARLVEVFARRLQIQEKMTAEIASCLDTVLKPHGV
                     AVVTEATHQCMTTRGVHKPGVTMVTSRMLGVFRDHAETRHEFLSAIGMRGAGGVVNGS
                     G"
BASE COUNT          595 a         1227 c         1265 g          594 t
ORIGIN      
        1 caaggccgtg cctttcgtct ccgacttctt cgatttctcg gtgtatctcg atgccgatga
       61 aggcgtgctg ctgtcgtggt acgtcgaccg ctttctcgcc ctgcgcggca ccgcctttgc
      121 cgacccgaag tcgtactttc accgctatgc gcaattgtcc gacgccgagg ctatcgccac
      181 cgcgacctcg atctggaacc gcatcaacct ggtgaacctg cgcgagaaca tcctgccgac
      241 gcggccccgc gccgatctca tcctcaagaa aggcgaaagc cacgaggtcg aggaggtggc
      301 gctgcgccgg ctgtgaggcg gcgcttggcg gcgtcaatcg cgccctcctt aaggggaggg
      361 caaagcgaaa gcgctgccgc ccgcgttgat aggtccgcga cagggcgcct gagcgaaaac
      421 gaaaaatcct tacgccgcca gcgcggcggc gccgccggcg agcgcagcgc tgagacgctc
      481 gcggtcgagc ggtttgacca ggaagccgtc catgcccgcg gcaaggcagg catcgcgatc
      541 ctcggcggag gcgttcgcgg ttagcgcgag gatcggcgtg cgcggcgcct cctgctcggc
      601 ctcgatggct ctgatgcggc gcgtggcctc gatgccgtcc atgcccggca tgtgcaggtc
      661 catgagcacg cgatcgtaag gcgtgccggc cgcacgggcg gcaagaaatg attcgacggc
      721 cgccacgcca tcggcggcca tcgtggggcg gtggccgagc ttggtgagga gggcgcgcgc
      781 gagtagcgcg ttgatctcgt tgtcctcggc aacaaggatc gaaaggctgc cgtccgtgcg
      841 cacttcgctt ggcgcctcct tgggttcggg cgccgccggc tcgaaggcgt cgtccgcgga
      901 aaagcgcgcg gcgagcgagg tggcgcgcac cggcctgatc aggtagctgg tgaaaccggc
      961 ttccttcagc gccgcgagct cggggcgcat cgccggcgtg accagcacga tccgccgcgg
     1021 gaccgttgcg gcgaggcgcg ccagcacttc gctttgcgcc gtgcccggcg cgtggtcgac
     1081 cagcaccgcg ctccacggcc gctccggcag cacggcggaa gcgacctcat cgtcgggcac
     1141 gatggccgtt cgcgcgcccc agcgctgcag ccgccgtgcg atcagagacg cctcgattgc
     1201 cgccggggcg acgatcagca cgtcgtggcc ggcaaggtcg ggcacaggca ggcccggctc
     1261 gtcggtatcg ccgaagcgcg cgagcggaat gctgacgcgg aaggtagcgc ccgctccggg
     1321 aatgctctcg atcgcgatcg tgccgcccat gctctcgatg atccgcttgg aaatggtcag
     1381 gcccaggccg gtgccgccgt attttcgtgc cgagccgccg tcggcctgct cgaactccgc
     1441 aaaaatccgt gcttggtcgt cgcccgaaat gccgatgccg gtgtcgcgta ccgagatggc
     1501 aatcgcgtcg ggttgcgtat ccggctcgac gatgatcgag acgccgccgc gatcggtaaa
     1561 cttgatggcg ttgtcggcga ggttgaacag cacctggcgc agccgcgccg cgtcgccgac
     1621 gacgcgcacc ggcagacgct cgtcgacgta gcagcagatt tccagtccct tcgcctgcgc
     1681 gcgcggcccg agcagctcga ccgcctcctc gacgaaggcc gcaaggacga acggccgcgc
     1741 cgcgagatcg atccgcccgg cctcgatctt ggagaaatcg aggatctcct cgatcagcga
     1801 cagcagagtc tcccccgacg tgcgcaccgc cttgagatac gccgcctgtt cgggcgtgag
     1861 cggcgtgtcg ccgatgaggt cggccatgcc gagaatgccg ttcagcggcg tgcggatttc
     1921 atgcgacacc atggccagga agcgcgattt ggcgcggctc gccgtttccg cctgatcgcg
     1981 cgcctcggcg agcgcccgct cggccagtac gcggccggtc acgtcacggc cgacgctttg
     2041 cgtctcgctg gcggagccgg cccgcaccgc gacctcgcgc caggcgatcc agcgcgcgcc
     2101 tgcgggcgcg gcgatcttct ggtcgtagat gcgcgtgccg tcggcgagcg acgtggtttc
     2161 tccctgttcc tcgaccggaa gcgcaaacgc ggtcgccaaa atgtcttcgc gcgtgcggcc
     2221 ggcaagcgca cagaaggcat cgttggcata ggtgatggcg ccggcgctgc cgcggcgcac
     2281 gatcacgtcg ccctgggtct cgaaaaagct cttggtgcgc tcctgcgctt cgctgatttc
     2341 ccagttgcga tccgccgcct cgtcgagacg cgtttccatg tcgcgcagct cgatcttcat
     2401 ctggcggatg cgcgaaatga ggatgccaat gccgccgcag gcggcaccga gcagcgccga
     2461 cacgccgatg gcgaacgtat ggggatcgta gtgcgccccg ggtgaggtcg ccccggaaag
     2521 gaagccgaac gcggccgcaa acgacatcga cgcgatggcg accgagcgga cggcgagcga
     2581 gagcaggcgg cggctgaaaa cggcgggttt tggcagatgg ccgcgaggac gcatggtccc
     2641 tttcccgcct ggtacgctgc gcggccgccg cggagttggg cgcgatcgtg cgccggccgc
     2701 gtcaatgccg ctgtatcgcg atggattgag gcgcattctg acctatgaac cttgcgcatc
     2761 ccttgccggc agcagcggcg attggagcga gggttgatgc tttgttaaca tcgcgccaat
     2821 gatcgatgac ccaccgccca atcgatggcc cacggtcaat cggtgccaaa atcatgtaat
     2881 gccaagtcag tcggtgccaa actcaatcgc tgccaaagtt agtcgactaa gaccaatgca
     2941 acgcctttac gctgccctgc gggacggccg gagaaaatcg gatggataag ctggtgaatt
     3001 cgaagcggtc gcgggggggc gtcgccgcgc cgtcgcgggc cgtccgccct gcgcgcgagg
     3061 aagccgagga cgcggtacgc acgctcatcc gctgggccgg cgatgacccc gaccgcgagg
     3121 ggcttcgcgg caccccgggc cgggtcgtgc gcgcctatga ggagtggttc gccggataca
     3181 aggaccatcc gcgcgactat ctcaagcgca cgttcgagga gaccggcggc tacgacgagg
     3241 tcgtggtgtt gcgcgacata cgcttcgagt cgcactgcga gcaccacatg gcgccgatca
     3301 tcggccgcgt gcatatcggc tatctgccgc gcaaccgcgt ggtcgggatc tccaagctgg
     3361 cgcggttggt cgaggtcttt gcgcggcgat tgcagatcca ggagaagatg accgccgaaa
     3421 tcgcgtcgtg cctcgacacc gtcctcaagc cgcacggcgt cgcggtcgtc accgaggcga
     3481 cgcatcagtg catgaccacg cgtggcgtgc acaaacccgg tgtcaccatg gtgacgagcc
     3541 gcatgctcgg cgtcttccgc gatcacgccg agacccggca cgaattcctg tcggcgatcg
     3601 gcatgcgcgg cgccggcggc gtggtcaacg gctccggctg aggccgtggc gccaccgctc
     3661 ggcgcgacgt cgaatgcctc c
//
LOCUS       DATMQB010000168         4750 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2844759, whole genome shotgun sequence.
ACCESSION   DATMQB010000168 DATMQB010000000
VERSION     DATMQB010000168.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4750
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2844759"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..776
                     /locus_tag="VNY79_05160"
     CDS             <1..776
                     /locus_tag="VNY79_05160"
                     /inference="COORDINATES: protein motif:HMM:NF014062.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="NfeD family protein"
                     /protein_id="HWX71867.1"
                     /translation="VTAAEALSLHVIDVIADDVPDLLRKIDGRTVNVAGKPQQLATAG
                     LDVVTVPPDWRTELLGLVTNPNVAFILMLIGIYGLILEFFNPGAVAPGLIGAISLFVA
                     LYALALLPISYAGAALVLLGVALMVAEAHIGAFGALGVGGIAAFVIGALLMFPAQVPG
                     LTLSGGVIAGAAIGSAALLIVVLAALLRSRKRPVVTGSEALIGAEGETVAWQGSEGRV
                     RVKGEIWLARADAPLVAGDHVRVVDRDGLVLRVEMIGSG"
     gene            915..1670
                     /locus_tag="VNY79_05165"
     CDS             915..1670
                     /locus_tag="VNY79_05165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="slipin family protein"
                     /protein_id="HWX71868.1"
                     /translation="MVLTAVIVIAILALIFIYASIRILREYERGVVFTLGRYTGTKGP
                     GLFLLVPFVQQMVRVDLRVVVDEVPPQDVISRDNVSVKVSAVLYFRVVDPERAIIQVS
                     NYLAATSQLAQTTLRWVLGKHDLDQMLAERDKLNADIQDVLDKQTEGWGIKVSTVELK
                     RIDLDESMVRAIARQAEAERERRAKIINAEGEQQAAQKLVEAARILAAVPQAMQLRYL
                     GTLFDIASERGSTIVFPFPIELVQAFAGSAPRS"
     gene            1926..3647
                     /locus_tag="VNY79_05170"
     CDS             1926..3647
                     /locus_tag="VNY79_05170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HWX71869.1"
                     /translation="MIVPISVGGWARLFTRWELLAILLILGLLAFLAEASRHLLQPLA
                     ELQQQPLSLDPAYLPEYAARTTLRMLIAMGVSLLFTFTYATLAAKNKQAERLLVPLLD
                     ILQSVPILGFISITVVFFMALAPGRVLGAEFAAIFAIFTSQAWNMAFSFYQSLRTVPA
                     ELVEASRSFRLSPWMNFWRVDVPFAMPQLIWNMMMSMSGSWFFVVASEAISVGNTTVT
                     LPGVGSYIALAIAQRDLAAVGYAIGTMLVVILIYDQVLFRPLVAWADRFRFEQEAGDL
                     PPRSWVLDVLRRSRLVDRLTRPFSVLWARSMRARWFDRGEAYKQAARDEGGRAPLILN
                     GAVIALGAVALWQVVRFATTGVSLADVGTTFLLGLATLSRVVVLIAVASCIWVPVGVW
                     VGTRPRAANLVQPVAQFLAAFPANLLFPIVVSAIVALKLNADIWLSPLMILGTQWYIL
                     FNVIAGAAAIPAELRAVGANFRVRGWLWWRRIALPAVLPYYVTGAITASGGSWNAAIV
                     AEVASWGDEKLEAIGLGAYIARQTEAGDFHRIVLGIAVMSLFVVLVNRTFWRPLYRYA
                     ERKFRLG"
     gene            3669..>4750
                     /locus_tag="VNY79_05175"
     CDS             3669..>4750
                     /locus_tag="VNY79_05175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019171971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrate/sulfonate/bicarbonate ABC transporter
                     ATP-binding protein"
                     /protein_id="HWX71870.1"
                     /translation="MSAALLDIHDLRQTFPRADGGELLVLDGIDFKLAQGQMVGLLGR
                     TGSGKSTLLRLIAGLLPPSAGTITYLGQKVVAPAPGIAMVFQSFALFPWLTVLENVQL
                     GLEALALPEAEIRQRALAAIDLIGLDGYESAYPRELSGGMRQRVGFARALVVHPNILL
                     MDEPFSALDVLTAETLRTDFLDLWGDGKLPIKGVILVTHNIEEAVLMCDRILLFSTNP
                     GRIISEIAVDLKQPRNRLDPQFRDLVEKIYVAMTARTQRSARTVAMSIDAILPRVSAN
                     TISGLLETLAGEPYKGKADLPVIADESSLEVDELFAIGDALQMLHLAEVEGGDIRLTE
                     IGKQFVEAGTDDRKKIFQRQLLAYVPL"
BASE COUNT          695 a         1640 c         1548 g          867 t
ORIGIN      
        1 gcgtgaccgc cgccgaggcg ctctcgcttc acgtcatcga cgtcatcgcc gacgacgtcc
       61 ccgatctcct gcgcaagatc gatgggcgca cggtcaatgt cgccggcaaa ccgcagcagc
      121 tcgcgaccgc cggtctcgac gttgtgaccg tgccgcctga ctggcgcacg gagctgctcg
      181 gcctcgtcac caacccgaac gtcgccttta ttctcatgct catcggcatc tacgggctga
      241 tcctcgaatt ctttaatcca ggcgcggtcg cgcccgggct cattggcgcc atcagcctct
      301 tcgtcgcgct ctacgcgctc gccctgctgc cgatcagcta cgccggcgcg gcgctcgtgc
      361 tgctcggcgt cgccctcatg gtcgccgagg cccacatcgg cgccttcggt gcgctcggcg
      421 tcggcggcat cgccgccttc gtcatcggcg cgctgctgat gttcccagcg caggtcccgg
      481 gtttgacgct gtccggcggc gtcatcgccg gcgccgccat cggcagcgcc gcgctgctca
      541 tcgtggtgct cgcggccctg ttgcgctcac gcaagcggcc ggtcgtcacc ggcagcgagg
      601 cgctgatcgg cgccgagggc gaaacggtcg cgtggcaggg gagcgaaggg cgggtgcggg
      661 tcaaaggcga aatctggctg gcgcgcgcgg acgcgccgct cgtggccggt gatcacgtca
      721 gggtagtcga tcgcgacggc ctcgttctcc gcgtcgagat gattggatct ggctagcgcc
      781 cgctccacgc ctgcagtggc gggagtcttg gggaatggcg ttgtcggcgt caaactgccg
      841 tgcccaggcg cgccgccttc gcgacggccg gttcgcacgg acgagcggat gaaagcaaac
      901 gagggagcag agccatggtc cttacagccg tcatcgtcat cgccatcctg gcgttgatct
      961 tcatttacgc ctcgatccgc atcctgcggg aatacgagcg cggcgtggtg ttcacgctcg
     1021 gccgctatac cgggaccaaa gggccgggcc tgttcctgct ggtgccgttc gtgcagcaga
     1081 tggtgcgcgt cgacctgcgg gtggtcgtcg atgaggtgcc gccgcaggac gtgatttccc
     1141 gcgacaacgt ctcggtcaag gtgagcgccg tcctctattt ccgcgtggtc gaccccgagc
     1201 gcgcgatcat ccaggtctcg aactatctcg cggcgacgag ccagctggcg cagaccacgc
     1261 tgcgctgggt gctcggcaag cacgacctcg accagatgct ggccgagcgc gacaagctca
     1321 atgccgacat ccaggacgtg ctcgacaagc agaccgaggg ctggggcatc aaggtctcga
     1381 ccgtcgagtt gaagcgcatc gatctcgacg agagcatggt gcgggccatc gcccgacagg
     1441 ccgaggccga gcgcgagcgc cgcgccaaga tcatcaacgc cgagggcgag cagcaggcgg
     1501 cgcagaagct ggtcgaggcc gcccgcatcc tcgccgccgt gccgcaggcg atgcagctgc
     1561 gctatctcgg cacgctgttc gatatcgcga gcgaacgcgg ctccacgatc gtgtttccgt
     1621 tcccgatcga gctggtgcaa gcctttgccg ggtcggcgcc gcggagctga ccagcccgcg
     1681 cagtatgatt ctcgctcatt cccgcgacag cgacagcggg aatccagaac cgcaagcacc
     1741 aaggtccccg ctttcgccgg gacgagcgga aatgatagcg ccgcttgcgc aattgctttg
     1801 accagcgccg cgccgatgtt atgtcaacgc gcgaagctcg cggccgttga tgcgtcatcg
     1861 cggccgcgat tttcatgaag gtggtgtgac agcggcaggc ggctatcgga atcgcggaca
     1921 tgcgcgtgat cgtgccaatt tccgtcggcg ggtgggcgcg cttgttcacg cgatgggagc
     1981 tgctcgcgat cctcctgatc ctcgggctcc tggcgttcct ggccgaggcg agtagacacc
     2041 tgctgcagcc gctcgccgag ctgcagcagc agccgctgtc gctcgacccc gcttatctgc
     2101 ccgaatacgc cgcgcgcacg accttgcgca tgctcatcgc catgggggtg tcgctcctct
     2161 tcaccttcac ctatgcgacg cttgccgcca agaacaagca ggccgaacgc ctgctggtcc
     2221 cgctgctcga catcctccag tcggtcccga tcctcggctt tatctcgatc accgtggtgt
     2281 tcttcatggc gctggcgcct ggccgcgtgc tcggcgccga gttcgccgcg atcttcgcca
     2341 tcttcaccag ccaagcctgg aacatggcct tcagcttcta tcaatcgctg cgcacggtgc
     2401 cggccgaact ggtcgaggcg tcgcgcagtt tccggctgag cccgtggatg aacttctggc
     2461 gcgtcgacgt gccgttcgcg atgccgcagc tcatctggaa catgatgatg tcgatgtcgg
     2521 gaagctggtt cttcgtcgtc gcctccgagg cgatcagcgt cggcaacacg acggtgacgc
     2581 tccccggcgt cggctcctac atcgcgctcg ccatcgcgca gcgggatctg gcggcggtcg
     2641 gctacgcgat cggcaccatg ctcgtcgtca tcctcatcta cgaccaggtg ctgttccggc
     2701 cgctggtggc gtgggccgac cgcttccgct tcgagcagga ggccggcgac ctgccgccgc
     2761 ggtcgtgggt gctcgacgtg ctgcgccgct cgcggctggt cgaccggctg acgcggccgt
     2821 tctccgttct ctgggcgcgg tcgatgcggg cgcgctggtt cgaccgcggc gaagcttaca
     2881 agcaggccgc gcgcgatgaa ggcgggcggg cgccgctcat cttgaacggc gcggtaatcg
     2941 cgctcggcgc ggtcgcgctc tggcaggtcg tgcgctttgc caccaccggc gtaagcctcg
     3001 ccgacgtggg cacgaccttc ctgctcggcc tcgccactct gagccgggtt gtcgtgctga
     3061 tcgccgtcgc cagctgcatc tgggtgccgg tcggcgtctg ggtcggcacc cggccgcgcg
     3121 ccgccaatct ggtgcagccg gtggcgcagt tcctcgccgc ctttccggcg aacctgctgt
     3181 ttccgatcgt ggtctcggcc atcgtcgcgc tcaaactcaa cgccgatatc tggctcagcc
     3241 cgctgatgat cctcggcacg caatggtaca tcctgttcaa cgtcatcgcc ggtgcggccg
     3301 cgatccccgc cgagctgcgc gccgtcggcg ccaatttccg cgtgcgcggc tggctgtggt
     3361 ggcggcgcat agcgctgccg gcagtgctgc cgtattacgt gaccggcgcg atcaccgctt
     3421 ccggcggctc gtggaatgcg gcgatcgtcg ccgaggtcgc ctcctggggc gacgagaagc
     3481 tcgaagccat cgggctcggc gcctacattg cgcggcagac cgaggccggc gacttccatc
     3541 gcatcgtgct cggcatcgcg gtgatgagtt tgttcgtagt cctggtcaat cgcactttct
     3601 ggcggccgct ttaccgctac gccgagcgca aatttcgcct gggctgaggc gcaatcgaag
     3661 gacatcccat gagcgccgcg ctcctcgaca ttcatgacct gcgccagacc tttccgcggg
     3721 ccgacggcgg cgagctgctg gtgctcgacg gcatcgattt caagctggcg cagggccaga
     3781 tggtggggct cctcggccgc accgggtccg gcaagtcgac cctgctgcgc ctgatcgccg
     3841 gcctgctgcc gccgtccgca ggcaccatca cctatctcgg ccagaaggtg gtcgcgccgg
     3901 cgccgggcat cgcgatggtg ttccagtcct tcgccctctt tccctggctg acggtcttgg
     3961 aaaatgtgca gctcggcctc gaggcgctgg cgctcccgga agcggagatc cgccagcgcg
     4021 ccctggcggc tatcgatctc atcgggctcg acggttacga atccgcctat ccgcgcgaac
     4081 tctccggcgg catgcgccag cgcgtcggct tcgcccgcgc gctcgtcgtg catcccaaca
     4141 tcctgctcat ggacgagccg ttctcggcgc tcgacgtgct cacggcggaa accctgcgca
     4201 ccgactttct cgacctctgg ggcgacggca agctgccgat caagggcgtc attctcgtga
     4261 cccacaacat cgaggaggcg gtgctgatgt gcgaccgcat cctcctgttc tcaaccaatc
     4321 ccgggcgcat catcagcgag atcgcggtcg atctcaagca gccgcgcaac cgcctcgatc
     4381 cgcaattccg cgacctggtc gagaaaatct acgtggcgat gaccgcgcgc acgcaacgct
     4441 cggcgcggac ggtggcgatg agcatcgacg ccattctgcc gcgcgtgtcc gccaacacta
     4501 tctccggtct gctcgaaacg ctggccggcg agccgtacaa gggcaaggcc gatctcccgg
     4561 tgatcgccga cgaatcgtcc ctggaggtgg acgagctgtt cgcgatcggc gacgccttgc
     4621 agatgctcca cctcgccgag gtcgaaggcg gcgacatcag gctcaccgag atcggtaagc
     4681 agttcgtcga ggccgggacc gacgaccgca agaagatctt ccagcgccag ctcctggcct
     4741 acgtcccgct
//
LOCUS       DATMQB010000169        13281 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_672216, whole genome shotgun sequence.
ACCESSION   DATMQB010000169 DATMQB010000000
VERSION     DATMQB010000169.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 13281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13281
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_672216"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            127..1134
                     /gene="gap"
                     /locus_tag="VNY79_05180"
     CDS             127..1134
                     /gene="gap"
                     /locus_tag="VNY79_05180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0019682 - glyceraldehyde-3-phosphate
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HWX71871.1"
                     /translation="MSVRVAINGFGRIGRNILRAVVEAGREDIEVIAVNDLAPVETNA
                     HLLRYDSVHGRFPGEVTVKGDTINCGNGAIKVTAVKDPAQLPWKELGVDVALECTGIF
                     ASKEKAALHLTAGAKRVLISAPADGVDLTVVYGVNHDKLTKAHAVVSNASCTTNCLAP
                     VAKVLNDAVGIDKGFMTTIHAYTNDQPTLDQVHKDLYRARAAALNMIPTSTGAAKAVG
                     LVLPELAGRLDGVAIRVPTPNVSVIDFKFVAKRATSKDEINAAVKRAAEQQLKGILGF
                     TEAPNVSTDFNHDPHSSVFHMDQTKVMDGTLVRVMSWYDNEWGFSNRMIDTTVAMGKL
                     I"
     gene            1207..2403
                     /locus_tag="VNY79_05185"
     CDS             1207..2403
                     /locus_tag="VNY79_05185"
                     /EC_number="2.7.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004618 - phosphoglycerate kinase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HWX71872.1"
                     /translation="MASFRSLDEADVKDKRVLVRVDFNVPMENGEVTDATRIERAAPT
                     MREIADRGGKVILLSHFGRPKDREPLYSLEPVAAVAAGVIGRPVAFAADCVGEIAERA
                     VAAMQRGEILCLENTRFHDGEEKNDRDFAAKLARLGDIYVDDAFSAAHRAHASVEALA
                     HLLPSYAGRAMQAELEALEKALEAPQRPVAAIVGGAKISSKLELLGNLLAKVETLIIG
                     GGMANTFLAAQGKTVGRSLCESELIPTARDILVKAKAARREIVLPVDAVVAQKFAAHV
                     PSRVVSVDDVGATDMILDIGPRTVERVVSMLARTRTLLWNGPLGAFEYEPFDNGTVEV
                     AEAAAELTVAGKLVTIAGGGDTVAALNTAGVTARFTYTSTAGGAFLEWLEGKTLPGVE
                     VLKIAR"
     gene            2486..3517
                     /locus_tag="VNY79_05190"
     CDS             2486..3517
                     /locus_tag="VNY79_05190"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004332 - fructose-bisphosphate aldolase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I fructose-bisphosphate aldolase"
                     /protein_id="HWX71873.1"
                     /translation="MNLTELNKVAEAMVAPGRGILAADESSGTIKKRFDVIGVQSTAD
                     ARRDYREMLFRSADAMTKYISGVILYDETIRQDAKDGTPLVKLIAQAGAIPGIKVDEG
                     AKPLPFCAGEVVTEGLDGLRDRLVEYRGLGAKFAKWRAVIDIASERGVPSYTCVNANA
                     HALARYAALCQDENIVPIVEPEVLMDGAHDIDRCVEVTTWMLKETFQELFYNRVALEG
                     MVLKPNMAVPGKKSPKRASVEEVADKTVRMLKACVPAAVPGIAFLSGGQSDEDATAHL
                     DAINKSGSLPWRVTFSYGRALQAAPQKAWSGKAENVAAAQRAFSHRAMMNGLATLGQW
                     KADLERKAA"
     gene            3514..4203
                     /locus_tag="VNY79_05195"
     CDS             3514..4203
                     /locus_tag="VNY79_05195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HWX71874.1"
                     /translation="MTSSPSPLSTAKRGQKNDPRLYVVTLRLADTAALARAIGDVIAA
                     GDVAAVLVRLEPSDERTLINRVKAIADAVQRRDAALILDGYPEIVARASADGAHLTGV
                     PALTAALDALKPERIAGAGGLRSRHDAMLAGEAGADYVMFGEPDRLGVRPPLDALVER
                     LEWWAEIFQPPCIGYAASLDEVSPLTQAGADFIALGDWIWTHAQGPAAAVAAAGRVAE
                     VASRQAPPTEP"
     gene            4200..5282
                     /locus_tag="VNY79_05200"
     CDS             4200..5282
                     /locus_tag="VNY79_05200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HWX71875.1"
                     /translation="MNAPAIGVTALFALAAMLGLLGPGTALAQNPEAKAGTKTSPAQH
                     KPHRPGVKPAAKDRASKQNAPEQGATAAKSSTQEPDLAYGAFQRGYFFTAFAVATKRV
                     EEKDDVSAMTLLGELYATGLGVPQNEAKAAEWYKFAAQRGDRNAMFALAMFSLQGRAG
                     PRDRDASAKWFAAAAKLGHPLAAYNLALLHMEGQLFPQDFGRAAELLRVAAKAGNPEA
                     QYALGTLYKEGRGVPKDMSEAVRLWSLASVADNTDAQVEYAIALYNGDGVAKNEVAAA
                     ALFRRAALRGGSPIAQDRLARILATGRGAPANPVEATKWHLISKARGETNLELDDFVN
                     NLDADTRAAGEKAAKPWLDVIKRRPS"
     gene            5518..6492
                     /gene="glk"
                     /locus_tag="VNY79_05205"
     CDS             5518..6492
                     /gene="glk"
                     /locus_tag="VNY79_05205"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011475022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004340 - glucokinase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucokinase"
                     /protein_id="HWX71876.1"
                     /translation="MTKRDEAEGILLADVGGTNVRFAVLRDGKLGSVAYMAVTEHQQF
                     ADGVAAFMAAQADAHTIRHALFDAAGLVENGRCALTNNAWVVDAAELAARFGFAGIHI
                     VNDFEAVAWSLPLMTADDLRMIGGRTPKPGAPMVVLGPGTGLGVAAYIPGNGGSVVRG
                     EGGHVTMPSSDAREDAIIARLRQKLGHVSAERVVSGSGLENIYWAIAALERQVVPERN
                     AAAITQAAVAGTCAVSRAALDTFCALLGEFAGNCALSFGAQGGVFIAGGIAPRLRDYL
                     PQSKFRSRFEAKGRMSRYLEAIPAYLILHEDPAFIGLQWLAQRRPWDS"
     gene            6682..7089
                     /locus_tag="VNY79_05210"
     CDS             6682..7089
                     /locus_tag="VNY79_05210"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71877.1"
                     /translation="MALLSLAAVSGGAAEAQTHASSYAHQYGAQLTKIRAAVIKVIGT
                     QGDRVEVAVAVLTVARINSTMNQTDHGARAGEASRIAPAVATTIVGEPAFNHVHTIRV
                     QYINRAKPGTHGKVIDAVDFRQDPTGAFVPHAT"
     gene            7132..7593
                     /locus_tag="VNY79_05215"
     CDS             7132..7593
                     /locus_tag="VNY79_05215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HWX71878.1"
                     /translation="MRIVQGDFSDPRVTDLLRIHLTAARAQTAPGSAHALDVAELQSP
                     EITFWAIWDDETLLGVGALKRLSADHGEVKSMHTAASVRRKGAGSAILRHIIEAARAC
                     GMSRLSLETGSWDYFRPARAFHARHGFVACMAFADYMPDPNSVFMSLELKS"
     gene            7734..8555
                     /locus_tag="VNY79_05220"
     CDS             7734..8555
                     /locus_tag="VNY79_05220"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008934 - inositol monophosphate
                     1-phosphatase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006020 - inositol metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046855 - obsolete inositol phosphate
                     dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HWX71879.1"
                     /translation="MPRSAVLNVMVKAAYRAGRSLKRDLGEIENLQVSMKGPRNFVTA
                     ADLRAEEIVHGELARARPDYGFLGEEGGVHAGSDKSHRWIVDPLDGTTNFLHGIPHFA
                     VSIALEREGTVVAALTYNPANDELFVAERGKGAFLNDQRLRVAARSRLADAVVACGLP
                     HHGRGDLALARREIAAAQQHYAGLRRFGAATLDLAWVAAGRFDAYWERDLSPWDLAAG
                     MLLVREAGGFVSDLDGRDGIFAKGEVAAGNDTMHRELLRLLQAAGKEPAKEKETS"
     gene            8811..9791
                     /locus_tag="VNY79_05225"
     CDS             8811..9791
                     /locus_tag="VNY79_05225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008136978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotA"
                     /protein_id="HWX71880.1"
                     /translation="MASDLDQAKLSSPRIFLLRMLVFLILCALVAFVLHPQILRAFMA
                     NPGLNGLIIGVLCIGIILSFHRVIRLFPEVRWVNSFRRADPGLALAREPTLLAPMAAM
                     LGGERVGRVAISAQTMRAFLDSLGTRLDEARDISRYLTGLLVFLGLLGTFWGLIETVG
                     SVGGIINGLKVGGDADTVFDALKQGLAAPLGGMGISFSSSLFGLAGSLVLGFLDLQTS
                     QAQNRFYTNLEDWLATTVQDLGAGVNGGGALPGSIMEALERLRYTVSEGAPNKATTTA
                     MANLAEAIQGLVQHMRAEQQMIRDWAEAQAKLNGDIRRFMEILARDSVHR"
     gene            9812..10837
                     /locus_tag="VNY79_05230"
     CDS             9812..10837
                     /locus_tag="VNY79_05230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan -binding protein"
                     /protein_id="HWX71881.1"
                     /translation="MALSRSRRDSGMNYWPGFVDALSTLILSIIFLLTVFMVAQFFLS
                     QEVSGKDTALARLTAQISRLSDLLSLERAGKTSLEDEIARLRASLSSVEGERDRLRGL
                     AAASQAAANDKAEVGKLNSQIDLEKAATARAVAQIEILNQQITALRRQIAALEEALGT
                     SEQKEKESQLRITDLGQRLNVALAQRVQELSRYRSDFFGKLREILGNRPDIRIVGDRF
                     VFQSEVFFDSGAAVLRPEGRAELDQLATALLELEKKIPSGINWVLRVDGHTDTRQLTG
                     NSQFRSNWELSAARAISVVQYLIAKGVAPQRLVAAGFGEFQPIDPGTTEDAFSRNRRI
                     ELKLTER"
     gene            10999..11436
                     /locus_tag="VNY79_05235"
     CDS             10999..11436
                     /locus_tag="VNY79_05235"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HWX71882.1"
                     /translation="MLRPYNPDDEEAAIALWLRTWQAAYPAIDFAARVGWWRERWRNE
                     LLPTAEIVVADEAGSVVGFVTVDPRTHYLDQIVVAPEFWRSGVGGALVAEAARLSPEG
                     LDLDVNTDNARAIRFYEKRGFVISGAGVNPISGKPVHRMSWRP"
     gene            complement(11440..13254)
                     /locus_tag="VNY79_05240"
     CDS             complement(11440..13254)
                     /locus_tag="VNY79_05240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter transmembrane domain-containing
                     protein"
                     /protein_id="HWX71883.1"
                     /translation="MASPPAAAEPEAATPSAKPASGGRGVNVRPLAALLPYVRRYRGR
                     ALAALGALILAALTTLTVPVAVRRMIDFGFTARGLALIDSYFLVMIGVAAVLSLSSAL
                     RYYLVTTLGERVVADLRSDVFAHLTSLSPAFFDEARTGEVISRLTADTTQVKAAAGTS
                     VSVALRNFVLFVGAGVMMVVSSPRLSAFVLAAIPLIVLPLYAFGRAVRRRSRYAQDTL
                     ADASAYAAELIGAVRVLQAFTNERLGVARFRDAVERAFSAARDSIRARALLTGIAIFL
                     VAASVVIVLWIGAQDVLAAKMTPGRLGQFILYAVLAAGALGSLSEIGGEVAQASGAAE
                     RLFEILAIKPAIAAPAHPLALPQPPRGEAAFAQVCFSYPTRERPLALRGVTFAMRQGE
                     KLAIVGPSGAGKSTIFHLLLRYYDPTAGRITLDGVRLNDLDPAALRGRIALVPQDSVM
                     FAASVADNIRFGRPDASNAEVRQAAEHAHAAAFIAALPQGFDTPVGEHGITLSGGQRQ
                     RIAIARAILRDAPLLLLDEATSSLDAESETQIAAALAALMRERTTIVIAHRLATVLSC
                     DRILVMDEGRIVEEGTHRTLTAAGGLYARLAKLQFQGA"
BASE COUNT         2336 a         4458 c         4418 g         2069 t
ORIGIN      
        1 cgagttcggc ctcgactgag cggcaatcgg acggcggggg cgaattgcgc cgcgggcgcg
       61 gttgtgactc gtatcgaacg gccgtaaaag ggcgccgaat tgcccgagac ttagccggag
      121 gaacgcatgt cggttcgcgt agccatcaac ggcttcggcc gcatcggccg caatatcctg
      181 cgcgccgtgg tcgaggctgg gcgcgaggat atcgaggtca tcgccgtgaa cgatctcgcc
      241 ccggtcgaga ccaatgcgca tctgttgcgc tacgactccg tgcatggccg cttccccggc
      301 gaggtgacgg tcaagggcga cacgatcaat tgcggcaacg gcgcaatcaa ggtgaccgcc
      361 gtcaaggatc cggcgcaact gccgtggaaa gaactcggcg tcgacgtcgc gctcgagtgc
      421 accggcatct tcgcgtcgaa ggagaaggcg gcgctccacc ttacggccgg cgccaagcgc
      481 gtgctgatct ccgcgccggc ggacggcgtc gacctcaccg tcgtctacgg cgtcaaccac
      541 gacaagctga ccaaggcgca cgcggtcgtt tccaatgctt cgtgcacgac caattgcctg
      601 gccccagtcg ccaaggtgct caacgacgcc gtcggcatcg acaaaggctt tatgacgacg
      661 atccatgcct acaccaacga ccagcccacg ctcgatcagg tgcacaagga cctttatcgg
      721 gcgcgcgccg cggcgcttaa catgatcccc acctcgaccg gcgcggccaa ggccgtcggc
      781 ctggtgctgc cggagcttgc cggccgcctt gacggcgtcg ccatccgcgt gccgacgcca
      841 aacgtctccg tcatcgactt caagttcgtc gcgaagcgcg cgacatcgaa ggacgagatc
      901 aacgccgcgg tgaaacgcgc tgccgagcag cagcttaaag gcattctcgg cttcaccgag
      961 gcgcccaatg tctcgaccga cttcaatcac gatccgcatt cctcggtctt ccacatggac
     1021 cagaccaagg tgatggacgg gacgctggtg cgcgtcatgt cgtggtacga caacgaatgg
     1081 ggcttctcca accgcatgat cgacaccacg gtggcgatgg gcaagctgat ctgaggcaca
     1141 tgccgagacg gcggcgcccc gctgaaccaa catctagcgc aagagcgtga tcggccgagc
     1201 ttgcagatgg cttcctttcg cagcctcgat gaagccgacg tgaaggacaa gcgcgtgctc
     1261 gtgcgcgtcg acttcaacgt gccaatggag aacggcgaag tgacggatgc gacgcgcatc
     1321 gagcgcgccg caccgacgat gcgcgagatc gccgacagag gcggcaaggt catcctgctc
     1381 tcgcatttcg gccggccgaa ggaccgcgag ccgctctatt cgctcgaacc ggtcgcggcc
     1441 gtggcggcgg gcgtgatcgg gcggccggtc gctttcgccg ccgactgcgt cggcgagatc
     1501 gccgaaaggg ccgtcgccgc tatgcagcgg ggcgaaattc tgtgcctgga gaacacgcgc
     1561 tttcacgacg gcgaggaaaa gaacgatcgt gacttcgcgg ccaagctcgc gcggctcggc
     1621 gacatctacg tcgacgacgc cttctccgcc gcgcatcgcg cgcacgcttc ggtcgaagcc
     1681 ctagcgcacc tcctcccctc ctatgcgggc cgcgccatgc aggccgagct cgaggcgttg
     1741 gagaaggcat tggaggcgcc gcagcggccg gtcgcggcga tcgtcggcgg cgccaagatc
     1801 tcgagcaagc tcgaactgct cggcaatctc cttgcgaaag tcgagacgct gatcatcggc
     1861 ggcggcatgg ccaacacctt tctggcagca caaggcaaga ccgtgggccg atcgctctgc
     1921 gaaagcgaac tcatcccgac ggcgcgcgat atcctcgtca aggcaaaggc ggcccggcgc
     1981 gaaatcgtgc tgcccgttga cgccgtggtg gcgcaaaagt ttgccgcgca tgtcccctcg
     2041 cgcgtcgtgt ccgtcgatga tgtcggcgcg accgacatga tcctcgatat cgggccgcgc
     2101 acggtcgagc gcgtcgtctc tatgctcgct cgcaccagga cgttgctttg gaacggcccg
     2161 ttgggcgcct tcgagtatga acccttcgac aacggcaccg tcgaggtcgc ggaggcggca
     2221 gcggaactca cggtcgccgg caagcttgtc accattgccg gcggcggcga cacggtggcg
     2281 gcgctcaata ccgccggcgt caccgcccgc ttcacctata cctcgaccgc gggcggcgcg
     2341 ttccttgaat ggctcgaagg caagacgctg cccggcgtcg aggtgctgaa gatcgccagg
     2401 tgatgcgtca ctgcgagcgt cgctgcgctc ctcgcaatga cgcgctataa tgttcaaaac
     2461 gatccggacc atataggagg acgctatgaa cctcaccgaa ttgaacaaag tcgccgaagc
     2521 gatggtcgct cccggccgcg gcatcctcgc tgccgatgaa tcgtcgggca ccatcaagaa
     2581 gcgcttcgat gtcatcgggg tccagtcgac cgcagacgcc cgccgcgact atcgcgaaat
     2641 gctgttccgc agcgcggacg cgatgacgaa gtacatttcc ggggtcatcc tttacgacga
     2701 gacgatccgg caggacgcca aggatggcac gcctctggtc aagctgatcg cgcaggcggg
     2761 cgcgatcccc ggcatcaagg tcgacgaagg cgccaagccg ctgccgttct gcgccggcga
     2821 agtcgtgact gaaggtctcg atggcctgcg cgaccggctc gtcgaatacc gcggcctcgg
     2881 cgccaagttc gccaagtggc gcgcggtgat cgacatcgcg tcagaacgcg gcgtgccgag
     2941 ctacacctgc gtcaatgcca acgcccacgc gctggcgcgt tatgccgcgc tctgccagga
     3001 cgaaaacatc gtgccgatcg tcgagccgga agtgctgatg gacggcgccc acgacatcga
     3061 ccgctgcgtc gaggtgacga cctggatgct caaggaaacc ttccaggagc ttttctacaa
     3121 tcgcgtcgcg ctcgaaggca tggtactcaa gccgaacatg gcggtgcccg gcaagaagtc
     3181 gccgaagcgc gcatcggtcg aagaggtggc ggataagacc gtgcggatgc tcaaggcgtg
     3241 cgtcccggca gcggtgcccg gcatcgcgtt cctctccggc ggccaatccg acgaggacgc
     3301 gacggcgcat ctcgacgcca tcaacaaatc cggatcgctg ccctggcgcg tgaccttctc
     3361 ctacggccgc gcgttgcagg ccgcaccgca gaaggcatgg tcgggcaagg cggaaaacgt
     3421 ggcggcagcg cagcgcgcct tcagccaccg cgcgatgatg aacggccttg ccacactcgg
     3481 ccagtggaag gccgatctcg agcggaaggc cgcgtgacct caagcccttc cccgctgagc
     3541 acggcgaagc gggggcaaaa gaacgatccg cggctttacg tcgtcacgct acgcctcgct
     3601 gataccgcgg cgctggcgcg ggcgatcggc gacgtcatcg ccgccggcga cgtcgctgcc
     3661 gttctcgtcc gcctcgaacc gagcgacgag cggacgctga tcaaccgtgt caaggcgatc
     3721 gccgacgcgg ttcagcgtcg cgacgccgca ctcatcctcg acggctatcc cgagatcgtg
     3781 gcgcgcgcca gcgccgacgg cgcccatctc accggcgtgc cggcgctgac cgccgcgctc
     3841 gatgcgctca agccagagcg catcgccggc gccggcgggc tgcgcagtcg tcatgatgcc
     3901 atgctcgcgg gcgaagctgg cgccgactac gtcatgttcg gcgagcccga tcgtctgggt
     3961 gtccggcctc ccctggatgc gctagtggag cggcttgagt ggtgggcgga aatcttccag
     4021 ccgccctgca tcggctatgc cgcaagcctg gacgaggtct cgccgctcac gcaagctggc
     4081 gccgatttca tcgcgctcgg tgactggata tggacgcatg cacaaggccc cgccgctgca
     4141 gtggcggcag ccggccgcgt ggccgaggtt gcatcgcgcc aggcaccgcc gaccgagcca
     4201 tgaatgctcc ggcgatcggc gtcacggcgt tgttcgcgct cgcggccatg ctcggtctcc
     4261 tcgggccggg cacggcgctg gcgcagaatc cggaagcgaa agccgggaca aagacctcac
     4321 cagcgcaaca caagccgcac cgtccggggg tgaagccggc ggcgaaagac cgcgcctcga
     4381 aacaaaacgc gcctgaacag ggcgccacgg cggcaaaatc ctcgacgcaa gagcccgatc
     4441 tagcctacgg cgcattccag cgcggctatt tcttcaccgc gttcgctgtg gcgaccaagc
     4501 gcgtcgagga gaaggacgat gtcagcgcga tgacgctgct tggcgagctt tacgcgaccg
     4561 ggctcggcgt gccgcagaac gaggccaagg cggccgaatg gtacaagttc gccgcccagc
     4621 gcggcgaccg caacgcgatg ttcgcgctgg cgatgttcag cctgcagggc cgcgccggcc
     4681 cgcgcgaccg ggacgccagt gccaagtggt ttgccgccgc cgccaagctc ggtcatccgc
     4741 tggccgccta caatctggcg ctgctccaca tggaaggcca attgttcccg caagatttcg
     4801 gccgtgccgc cgaactcctg cgcgtcgccg ccaaggccgg caatccggaa gcgcaatatg
     4861 cgctgggcac cctgtacaag gagggccgcg gcgttcccaa ggacatgagc gaagcggtac
     4921 ggctgtggtc gctcgcttca gtcgctgaca ataccgacgc ccaggtcgag tacgcgatcg
     4981 cgctttataa cggcgacggc gtcgccaaga acgaagtggc cgcggcagcc ctgttccgcc
     5041 gagcagcgct gcgcggcggc agccccatcg cccaggaccg cctcgcgcgc atccttgcga
     5101 ccggccgcgg cgcgcctgcg aaccccgtcg aggcgaccaa gtggcacctg atatcgaagg
     5161 cgcgcggtga gaccaatctg gaactcgacg acttcgtcaa caatctcgac gccgacaccc
     5221 gcgccgcggg ggagaaggcg gcgaagccct ggctcgacgt gatcaaacgc aggccgtcat
     5281 gagcgactag gcgcggcgcc aagcggcaaa tgggcgcgcc cgtcgccgcc aagcctgcaa
     5341 tcaccgaacc cggccgcgac aaaaaatcgt gcgggcttct acggaccttt tctcaacgac
     5401 gcctcaagcg cctccggcat tcgtcccgca gcgcgaagtg cgatatgctt tcatcgacgg
     5461 cgctccgatc gcgacttgtc gcgacgtgag aagcgccgcg cgacatcggg aggcggcgtg
     5521 acgaagcgcg acgaggcgga gggcatcttg ctggccgacg tcggcggcac caatgtgcgt
     5581 tttgcggtgc tccgggacgg caagctcggc tccgtcgcct acatggctgt taccgaacat
     5641 cagcagttcg ccgacggggt cgccgcattc atggccgctc aagctgacgc gcacacaatt
     5701 cgtcacgccc tgttcgacgc cgccggcctt gtcgaaaatg gccggtgcgc gcttaccaac
     5761 aacgcctggg tggtcgacgc ggccgagttg gcggcgcgct tcggattcgc cggcatccac
     5821 atcgtcaacg acttcgaggc ggtcgcgtgg tcactgccgc ttatgaccgc ggacgatctg
     5881 cgcatgatcg gcggccgcac gccgaagccg ggagcgccga tggtggtcct cggcccgggc
     5941 accggcctcg gcgtcgccgc ctacataccg ggcaacggcg gctccgtcgt gcgcggcgaa
     6001 ggcgggcatg tgacgatgcc gagcagcgac gcccgcgaag acgcgatcat cgcgaggttg
     6061 cggcaaaaat tggggcacgt gtcggccgag cgcgtcgtct ccgggagcgg ccttgaaaac
     6121 atctactggg cgatcgccgc gctcgagcgt caggtcgtgc cggaacgcaa cgcggccgcg
     6181 atcacgcaag ccgcggtcgc cggcacctgc gccgtcagcc gcgccgcgct cgatactttc
     6241 tgcgcgctgc tgggcgagtt cgccggcaat tgcgccctca gtttcggcgc gcagggcggc
     6301 gtcttcatcg ccggcggtat tgcgccgcgc cttcgcgact atctgccgca atcaaagttt
     6361 cggtcccgct tcgaggcgaa ggggcggatg agtcgctatc tcgaggcgat tccggcctat
     6421 ctgatcttgc acgaggatcc ggcgttcatc ggcttgcaat ggctggccca acggcggccg
     6481 tgggattcat aagattgcga tcgagaagat tggctacatg cgggcgatct tgactgcctc
     6541 atccggcgat cgatctgtcc cgcctgcgcc cgcctccacc gatgcggcat cgatggcgat
     6601 cattcacagc aggcagtttt caaccggcaa gccatttgga gcaccaacat gacctgcaga
     6661 atatcgcttg ccgccgccgg gatggcgttg ctgtcgctcg cggcggtttc cggcggcgcg
     6721 gccgaagccc aaacgcatgc gtcaagctat gcccatcagt acggtgccca gctcacaaaa
     6781 atccgcgccg ccgtcatcaa ggtgatcggc acgcagggcg accgcgtcga ggtcgccgtc
     6841 gccgttctca ccgtcgcgcg catcaacagc acaatgaacc aaaccgatca tggcgcgcgc
     6901 gctggcgagg cgtcgagaat cgctccggcg gtggcgacga cgattgtcgg cgagcccgcg
     6961 ttcaaccatg tgcacaccat ccgcgtgcag tacatcaatc gcgccaagcc ggggactcat
     7021 gggaaagtca tcgatgcggt ggatttcagg caggatccga ccggcgcatt cgtgccacat
     7081 gcgacctgag cgatccggga tcggccgcga ccgtcagggc gccgagcgat gatccgcatc
     7141 gtccaaggcg acttcagcga cccgcgggtc accgatctcc tgcgtatcca ccttactgcc
     7201 gcccgcgcgc aaacggctcc gggcagcgcg catgccctcg atgtcgcgga gctgcaatcg
     7261 ccggagatta ccttctgggc catttgggac gacgaaacgc tccttggcgt cggtgcgctg
     7321 aagcgcctgt cggcggacca cggcgaggtc aaatcgatgc atacggcggc atcggtgcgc
     7381 cgaaagggag ccggcagcgc catactgcgc cacatcattg aggccgcgcg ggcttgcggc
     7441 atgtcgcggc tgagcctcga gaccggttcc tgggactatt ttcgtccggc acgggctttc
     7501 catgcacgcc acggcttcgt ggcgtgcatg gctttcgccg actatatgcc cgacccgaac
     7561 agcgtcttca tgtcactcga gctcaagtcc tgaatctcgg caagcgcagc cgcgtagccc
     7621 ggatggagca aagcgaatcc gggataatgc ggcgaggcac caagctggcg catagcggga
     7681 ggacgcgccg cgggcttgac gccgccgcac cttgcgccct accgcaggcc gccatgcccc
     7741 gttccgccgt cctcaacgtg atggtcaagg ccgcctatcg cgccggccgc agcctcaagc
     7801 gcgatctcgg cgagatcgag aacctgcagg tctcgatgaa ggggccgcgc aatttcgtca
     7861 ccgccgcaga cctgcgcgcc gaggagatcg tgcacggcga gttggccagg gcgcgacccg
     7921 attacggctt cctcggcgag gaaggcggcg tccatgccgg cagcgataaa agccaccgct
     7981 ggatcgtcga tccgctcgac ggcaccacca acttcctgca cggcatcccg cacttcgcgg
     8041 tctcgattgc cctcgagcgc gaaggcaccg tggtcgccgc actcacctac aatccggcga
     8101 acgacgaatt gttcgtcgcc gaacggggca agggcgcgtt cctcaacgat cagcggctac
     8161 gtgtcgccgc acggtcacgg ctcgcggacg cggtcgtggc ctgcggcctg ccacatcacg
     8221 gacgcggcga tcttgctctg gcgcggcgcg aaatcgccgc ggcgcagcaa cactatgccg
     8281 gcttgcggcg gtttggcgct gccaccctcg atctcgcctg ggtcgccgcc ggccgcttcg
     8341 acgcgtactg ggagcgcgac ctttcaccgt gggatctcgc cgccggcatg ctgctcgtgc
     8401 gcgaagccgg aggattcgtc agcgatctcg acggtcgcga cggcatcttc gccaagggcg
     8461 aggtcgccgc cggtaacgac accatgcacc gcgagcttct gcgcctcctc caggcggccg
     8521 gcaaggaacc cgcgaaagag aaggaaacgt cgtgagccgc cgaggctggc cgcagacccg
     8581 ccatcagcgt gccgcaagga tgcggcacct cgtcgatgga cagctgcaga gccggtggtc
     8641 ttcactgcct cgcgccacgc gcaatggggc cagccgtgac cgaccgcggg acgcagcgaa
     8701 gcgatgaggc cgatgcggaa ttcacaagct cagcagccgt taaccatgca tttttcttgt
     8761 acgcgcggtg tggcatattg cgctgattct gcggcgttaa gctgaagccg atggcgagcg
     8821 acctcgatca agccaaacta tcctcgcccc gcatctttct ccttcggatg ctggtgttcc
     8881 tgatcctttg cgccttggtc gccttcgtcc tgcacccgca gatcctgagg gccttcatgg
     8941 ccaaccccgg gctcaacggg ctgatcatcg gcgtcctttg catcggcatc atcctgtcgt
     9001 ttcatcgcgt gatccggctt ttcccggagg tccgctgggt caacagcttt cgccgcgccg
     9061 atccgggtct cgcgctcgcg cgagagccga cgctgctcgc cccaatggca gcgatgcttg
     9121 gcggcgagcg ggtgggccgg gtggcgatct cggcacagac catgcgcgcc ttcctcgatt
     9181 cgctggggac gcggctcgac gaggcgcgcg acatctcccg ctacctgacc ggcctgttgg
     9241 tgttcctcgg gctgctcggc acgttctggg gcctgatcga gaccgtcggc tcggtcggcg
     9301 gcatcatcaa cgggctcaag gtcggcggcg acgctgacac cgtgttcgac gcgctcaagc
     9361 agggcctcgc ggcgccgctc ggcggtatgg gcatctcgtt ctcctcctcg ctgttcggcc
     9421 tcgcggggtc cctcgttctc ggctttctcg acctgcagac gagccaggcg cagaaccgct
     9481 tctacaccaa tctcgaggac tggctggcga cgacggtgca ggacctcggc gccggcgtga
     9541 atggcggcgg cgccctgccc ggcagcatca tggaggcgct cgagcgcctg cgctacacgg
     9601 tgagcgaagg cgcgccgaac aaggcgacga cgaccgcgat ggccaacctc gccgaagcga
     9661 ttcaggggct cgtgcagcac atgcgcgccg agcagcagat gatccgcgac tgggcggagg
     9721 cgcaggccaa gctcaacggc gacatccgcc gcttcatgga aatcttggcg cgcgactccg
     9781 tgcacaggta gagtagatag agacgcagcc catggcgctt tcccgcagcc gccgcgacag
     9841 cggcatgaat tactggccgg gcttcgtcga tgccctgtcg acgctcatcc tgtccatcat
     9901 cttcctgctc accgtgttca tggtcgcgca gttcttcctg tcgcaggaag tctccggcaa
     9961 ggacaccgcg ctcgcccgcc tcaccgcgca gatttcccgg ctgagcgacc tcctgtcgct
    10021 cgagcgggcc ggcaagacca gccttgagga cgagattgca cggctgcggg catcgctctc
    10081 ctcggtcgag ggcgaacgcg accgcctgcg cggtcttgcc gcggcgagcc aggcggcggc
    10141 gaacgacaag gccgaggtcg ggaagctcaa ctcgcagatc gacctcgaaa aggcggcaac
    10201 cgcgcgcgcg gtcgcgcaga tcgagatcct caatcagcag atcaccgcgc tccgccgcca
    10261 gatcgccgcg ctcgaggaag cgctcggaac ctccgagcag aaggaaaaag aatcgcagct
    10321 gcgcatcacc gatctcggcc aacgcctgaa cgtggcgctg gcgcagcggg tgcaggaatt
    10381 atcgcgctac cgctcggatt tctttggcaa gctgcgcgaa attctcggca accgccccga
    10441 catccgcatc gtcggcgacc gctttgtgtt ccaatcggag gtattcttcg acagcggcgc
    10501 cgccgtgctg cggcccgagg gccgcgccga gctcgaccaa ttggcgacag cactgcttga
    10561 gctcgaaaag aaaattcctt caggaatcaa ctgggtgctg cgcgtcgacg gccataccga
    10621 cacgcggcag ctcacgggga actcgcagtt caggtcgaac tgggagctgt cggccgcccg
    10681 cgcgatctcg gtggtgcaat acctgatcgc caagggtgtc gcaccgcagc gtttggtggc
    10741 agccggcttc ggcgagttcc aaccgatcga tcccggaacc accgaagacg ccttcagccg
    10801 caaccgccgc atcgagctca aactgaccga acggtgaggc gatgcagaca tccaagcgtc
    10861 atgcgcaggc ttgaccccgc gcagccttgc tgaaaatcgc cagagatcgc attgccgcaa
    10921 gactctgact ccccgaacca gcgcagtgat ttccggggca agccgggcaa tgacgcacgc
    10981 aaaagggcac ctgccgtttt gctgcggccc tacaatcccg acgacgagga ggccgcgatc
    11041 gcgctgtggc tgcgaacctg gcaggcggca tacccggcga tcgattttgc ggcgcgggtc
    11101 ggctggtggc gcgagcgctg gcgcaacgag ttgctgccga cggcagagat cgtcgttgct
    11161 gatgaggcgg gcagcgtcgt cgggttcgtc accgtcgatc cgcgcacgca ctatctcgat
    11221 cagatcgtgg tagcgccgga gttttggcgg tcgggcgtcg gcggcgcgct cgtcgccgaa
    11281 gccgcgcgcc tctcgccgga gggtctcgat ctcgatgtca acaccgacaa cgcgcgcgcg
    11341 atccggttct acgagaagcg cgggtttgtc atcagcggcg ccggggtcaa tccgatctcg
    11401 ggcaagcccg tgcaccgcat gagctggcgg ccataacggt cacgccccct gaaactgcag
    11461 cttcgccagc cgggcgtaga ggccgccggc ggcggtgagc gtccggtgcg tgccttcctc
    11521 gacgatacgg ccttcgtcca tcaccaggat gcggtcgcag gaaagcaccg tggccaggcg
    11581 atgcgcgatc acgatggtgg tgcgctcgcg catcagggcc gcgagcgcgg cggcgatctg
    11641 cgtctcactt tcggcatcaa gtgaagaggt cgcttcgtcg aggaggagga gcggcgcgtc
    11701 gcgcaagatg gcgcgggcaa tggcaatcct ttgccgctgg ccgccggaaa gcgtaattcc
    11761 gtgctcgccc accggcgtgt cgaagccttg cggcagcgcg gcgatgaacg cggcggcgtg
    11821 cgcatgctcg gcggcctggc ggacctcggc gttggaggca tccggccggc cgaagcggat
    11881 gttgtcggcg acggaggcag cgaacatcac gctgtcctgc ggcacgagcg cgatgcgccc
    11941 gcgcagcgcc gccggatcga ggtcattgag ccgaacaccg tcgagcgtga tgcgtccggc
    12001 ggtcgggtcg taatagcgca gcagcagatg gaagatcgtg cttttgccgg cgccggaagg
    12061 gccgacgatg gcgagctttt cgccttggcg catcgcaaag gtcacgccgc ggagcgccag
    12121 ggggcgctcc cgcgtcggat acgagaagca cacctgggcg aacgcggctt cgccgcgcgg
    12181 cggctgcggg agcgcgagcg gatgcgcggg cgcggcgatc gccggcttga tcgcaagaat
    12241 ctcgaacagc cgctcggccg caccggaggc ctgcgcgact tcgccgccga tttccgagag
    12301 cgagccgagc gctccggcgg cgagcacggc gtagaggatg aactggccga gccggcccgg
    12361 ggtcatcttc gcggccagca cgtcctgggc gccgatccag agcacgatga ccacgctcgc
    12421 agcgacgagg aaaatagcga tgccggtgag cagcgcgcgg gcgcggatcg agtcgcgggc
    12481 ggcgctgaag gcgcgctcga ccgcatcgcg aaagcgcgcg acgccgaggc gctcgttggt
    12541 gaaggcctgc aagacgcgca ccgcgccgat cagctcggcg gcataggccg aggcgtcggc
    12601 gagcgtgtct tgcgcgtagc gtgatcggcg gcgcaccgcc cggccgaagg cgtagagcgg
    12661 cagcacgatg agcggaatcg ccgcgagcac gaaggcggac aggcgcgggc tcgacaccac
    12721 catcatgacg ccggcgccga cgaacagcac gaaattgcgc agggcgaccg agaccgacgt
    12781 gccggccgcg gccttgacct gcgtggtgtc ggcggtcagc cgcgagatca cctcgccggt
    12841 cctggcttca tcgaagaagg cgggcgacag cgaggtgagg tgggcgaaga cgtcgctgcg
    12901 caggtcggcg accacgcgct cgccgagcgt ggtgacgagg tagtagcgga gcgcgctcga
    12961 gagcgagagc accgcggcaa cgccgatcat gaccagaaag tagctgtcga tgagcgccag
    13021 gccacgcgcg gtgaagccga agtcgatcat gcgccgcacc gcgaccggca cggtcagcgt
    13081 cgtcaaggcc gcgaggatca gagcgccgag cgccgccagc gcccgaccac ggtagcgccg
    13141 gacgtagggg aggagcgccg cgagcggccg cacattgacc cccctccccc cggacgctgg
    13201 ctttgcagac ggcgtagcgg cttccggctc ggccgccgcg ggcggcgacg ccattaccgc
    13261 cgcgatggtc gccgcatcct t
//
LOCUS       DATMQB010000170         3677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_362921, whole genome shotgun sequence.
ACCESSION   DATMQB010000170 DATMQB010000000
VERSION     DATMQB010000170.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3677
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_362921"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            268..540
                     /locus_tag="VNY79_05245"
     CDS             268..540
                     /locus_tag="VNY79_05245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71884.1"
                     /translation="MGKASAPARVQAQGAVPVTIHRLLQHSAFGPDDIDRIVTAYEAT
                     LRALRADRADPAAETVAKTIMQIAQTGVRDPTRLRQLALKELAPSK"
     gene            complement(731..1573)
                     /locus_tag="VNY79_05250"
     CDS             complement(731..1573)
                     /locus_tag="VNY79_05250"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX71885.1"
                     /translation="MRGKTVVITGATSGIGEVAALALAKMGARIIAVGRSKARGDATV
                     ARLRGSAPGVAHALHLADLSRLSEMKRVAAQIADQEAHVDVLINNAGAAFGTRQVTED
                     GLERNFALNHMAYFVLTSGLRERLAAAPAGRIVNTASSAHMTAALDFDDLQSERGYGA
                     IKAYGRSKLCNILFTRELARRLHGTAVTANCLHPGFVATRFADESGGPLSYLTRVAKL
                     FAISPARGADTIIYLASAPDVAQTTGQYFYRRRPAKTSAAAQDDRAASTLWQRSAALA
                     GIED"
     gene            1869..3053
                     /locus_tag="VNY79_05255"
     CDS             1869..3053
                     /locus_tag="VNY79_05255"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HWX71886.1"
                     /translation="MYRGTKDIMLPTTITGSLPRPSWYTENLGTRMFLDAMVGRRYRE
                     QYVDTLSCYLRDQELAGLDIVTDGDCRFDDDVGGQSWTSYPPHHMSGYEHANPRPTPS
                     GRGGLWFPRGHILHDYLESRVMPTIVGPVGRGDLQYTVLWKTAQRLTKKPVKFGAVSA
                     EIVAFASQDRHYKSVPERMLAIADAFNEEYHELADAGCPVIQIEEPQIHLIAVRKVQD
                     KVITPDLMVEVFNRTVKGLRDKTEVWAHSCWGNPSQQRMFAEVQTYKPALETYDKVDA
                     DVITFESSSSGGMDLEAIGKSITGKKIAIGVIDHHTLQVESPEEVAAQIRAALKYIPP
                     ERLVISSDCGMGREGMSRRHAYYKMVSLVLGTNMVRKELGLPQAECLAADERYSLVVP
                     AK"
     gene            3272..>3677
                     /locus_tag="VNY79_05260"
     CDS             3272..>3677
                     /locus_tag="VNY79_05260"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding monooxygenase"
                     /protein_id="HWX71887.1"
                     /translation="MAHLGGHAVVIGASIGGLLAARALADHYDQVTIVERDALPEFDE
                     PRKGVPQGRHTHGLLARGREVLEELFPGLSAELAAEGAVYGDVVDQVLWFNHGCYLRN
                     APSKLLGLLLSRPMLEGGVRRRLLKLDNVRLRE"
BASE COUNT          664 a         1202 c         1222 g          589 t
ORIGIN      
        1 gcgccgcagc cgccggaccg ccggccagaa aatgcctcac aagcagccgc ccagtcacct
       61 accatatatc gctggaacct gtgaaaagca tcgacgccgc ctgaaccgcc cgaacccgtg
      121 agaaagcaag cacggctggc accgcgcctt ccggccctca atccaagccc tcagcgctct
      181 tctcggttgt cgcgcgcatt catgttgcgt tcatcgacaa gcctttaggt caccatggtt
      241 gctggccgca aaacggggat ggcagcaatg gggaaggcga gcgctcccgc ccgcgtacag
      301 gcgcaaggag cggtgcccgt gacaattcat cggctattgc agcattcggc gttcggtccg
      361 gacgatatcg accgcatcgt gacggcgtat gaggcgacgc tgcgcgccct gcgagccgat
      421 cgagcagacc ctgccgcaga gactgtcgcg aaaacgatca tgcaaattgc gcagaccgga
      481 gtgcgcgacc cgacgcgcct gcgccagctt gcgctcaaag aacttgcgcc ttccaaatag
      541 cggtgctttc cctcggcgaa gtgggcttcg cttgatcagg cgcaggccgg caatgcgggc
      601 tagcgcggtc cgcgaaggat cgatgaagct gcgcgatgcc gcgcacgata ccgcgcgcct
      661 gatccagtca acgaaagctt cgatcgcaac agactgagcg gcggcaagcg gggctcgcgc
      721 ttgcacacca tcagtcctcg atgccggcca aggccgcgct ccgctgccac agggtggaag
      781 ccgcgcggtc atcctgcgcc gccgccgagg tcttggccgg acggcgccgg tagaagtatt
      841 gcccagtcgt ttgcgcgacg tccggcgcag aggcgaggta gatgatcgtg tcggcgcctc
      901 gcgcgggtga tatcgcgaac agtttggcaa cccgggtgag gtaggagagc gggccgccgc
      961 tctcatcggc aaagcgcgtg gcgacgaagc cggggtgcag gcaattcgcc gtcacggccg
     1021 tgccgtgcag gcggcgggcg agttcgcgcg tgaacagaat gttgcaaagc ttcgagcggc
     1081 cgtacgcctt tatggcgccg tagcccctct ccgactggag atcgtcgaaa tcaagggcag
     1141 cggtcatatg tgcggacgag gcggtattga cgatgcggcc ggctggcgcc gccgcgagcc
     1201 gctcgcgcaa tccagaggtt agaacgaaat aggccatgtg gttgagcgca aaattgcgct
     1261 ccaggccgtc ctcggtcacc tggcgcgtcc cgaatgccgc gccggcgttg ttgatcagaa
     1321 catcgacgtg cgcctcctga tcggcgatct gcgccgccac tcgtttcatt tccgacaggc
     1381 gcgagagatc ggcgagatgc agggcgtggg cgacaccggg cgcgctgccg cgcagtcgcg
     1441 ccaccgtcgc gtcgccgcgc gccttgctcc gcccgacggc gatgatgcga gcgcccatct
     1501 tggcgagcgc cagcgcggca acctcgccga ttcccgacgt ggcaccggtg atgacgacag
     1561 tcttgcctct catgacgttc gcacccccgc tgcttcatct tccctcaata gagtacccgg
     1621 tcgcgcaaag ccttgcagag cgacgcccgc ttgagaagcg ctgacgccgg cttgatcttc
     1681 gccgcggcgt cgccgcgctg ttcatcgcct gtcgcccatc ggggcgatcg cccaacccga
     1741 ctgagcgcat gcggtgggcg ggcggccgct gccgccgcga ctttttgctg tttgcgctga
     1801 gccggtaggc tataccaccg gccggtaaga agccgaaatc ttgtttcgca ttctgggaga
     1861 tagcgacgat gtatcggggc accaaggaca tcatgctgcc gacgacgatc accggctcgc
     1921 tgccgcggcc gagctggtac acggagaatc tcggcacccg catgttcctc gatgcgatgg
     1981 tcggccgccg ctaccgcgag cagtacgtcg acacgctgtc ctgctatctg cgcgaccagg
     2041 agcttgccgg gctcgacatc gtgaccgacg gcgactgccg cttcgacgac gacgtcggcg
     2101 ggcagagctg gaccagctat ccgccgcacc acatgagcgg ctacgagcat gccaatccgc
     2161 gcccgactcc gtccggccgc ggcgggctgt ggtttccgcg cggtcacatc ctgcacgact
     2221 acctggaatc gcgggtgatg ccgacgatcg tcggcccggt cgggcgcggc gacctgcaat
     2281 acaccgtgct gtggaagacg gcgcagcggc tcaccaagaa gccggtcaag ttcggcgcgg
     2341 tctcggccga gatcgtcgcc ttcgcttcgc aggaccgcca ttacaagagc gtgcccgagc
     2401 gcatgctggc gatcgccgac gccttcaacg aggagtatca cgagctcgcc gacgccggct
     2461 gcccggtaat ccagatcgag gagccgcaga tccacctgat cgcggtgcgc aaggtccagg
     2521 acaaggtgat cacgccggac ttgatggtcg aggtgttcaa ccgcacggtg aagggcctgc
     2581 gcgacaagac cgaggtgtgg gcgcattcct gctggggcaa cccgtcgcag cagcgcatgt
     2641 tcgccgaagt gcagacctac aagccggcgc tcgagaccta cgacaaggtg gacgccgacg
     2701 tgatcacctt cgagtcgtcg agctccggcg gcatggatct cgaggcgatc ggcaagagca
     2761 tcaccggcaa gaagatcgcg atcggcgtca tcgatcatca cacgctgcag gtggaaagcc
     2821 cggaggaggt tgccgcgcaa atccgcgccg cgctcaaata catcccgccc gagcggctgg
     2881 tgatctcgtc cgattgcggc atggggcgcg agggcatgag ccgccgtcac gcctactaca
     2941 agatggtctc gctggtgctc ggcaccaaca tggtgcgcaa ggagctcggc ttgccgcaag
     3001 cggaatgcct cgccgccgat gagcgttatt cgctggtggt gccggcgaag tgacggcgat
     3061 gtgaacgggc gatcgaccgg cggggtaagg gtcgcgccgg caagccggca tgcgcccgcg
     3121 gcgacgggcc tatcgccacg tcttcaccga aaaatgaagc ccggaaccgg tttggctccc
     3181 gggcgaagca gccggggccg aaaccaaacc cggcgccgcc cgtatcatgc gcaggcggca
     3241 gagccgcaac gaaaaaaagg aaaccggtgc catggcgcat ctcggtggtc atgcggtcgt
     3301 gatcggcgcg agcataggag gcctcttggc ggcgcgcgcg ctcgccgatc actacgatca
     3361 ggtaacgata gttgaacgcg atgcgctccc ggaattcgac gagccgcgca aaggcgtgcc
     3421 gcaggggcgt catacgcacg gcttgctcgc ccgcggccgc gaagtgctcg aggagctgtt
     3481 tcctggtctg agcgcggagc tggcggcgga gggtgccgtc tacggcgacg tggtcgacca
     3541 ggtcctctgg ttcaaccacg gttgctatct gcgcaacgcc ccgagcaagc tcctcggcct
     3601 gctgctcagc cgcccgatgc tcgaaggcgg cgtgcggcgc cggctgctga agcttgacaa
     3661 tgtccggctc cgcgagc
//
LOCUS       DATMQB010000171         5125 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4082728, whole genome shotgun sequence.
ACCESSION   DATMQB010000171 DATMQB010000000
VERSION     DATMQB010000171.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5125)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5125)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5125
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4082728"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..452)
                     /locus_tag="VNY79_05265"
     CDS             complement(<1..452)
                     /locus_tag="VNY79_05265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-hepta-3-ene-1,7-dioate hydratase"
                     /protein_id="HWX71888.1"
                     /translation="MMSQADRRKAADVLLAAEKERKQAAQLSKTWPSMTIEDAYAIST
                     EVLERKIDAGAKLIGHKVGLTSKAMQRSSQIDEPDYGHLLDSMMIADGARIAHENYCV
                     PRVEIELAFVLGKPLRGPGVRLPDVLRATEYVVPAIEIVDARLEDPRK"
     gene            complement(529..882)
                     /locus_tag="VNY79_05270"
     CDS             complement(529..882)
                     /locus_tag="VNY79_05270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71889.1"
                     /translation="MKDAQKKLDDFNQGQRDAAKEAMKNAATATKDAATAIVRLPGTR
                     AIEVHQACPKAPNGAPDCLEAAVNACRGKGFNTGKPLDVSSSEKCVTTMWLSGQSQGE
                     CRVETETILARALCQ"
     gene            complement(1388..1969)
                     /locus_tag="VNY79_05275"
     CDS             complement(1388..1969)
                     /locus_tag="VNY79_05275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YqaA family protein"
                     /protein_id="HWX71890.1"
                     /translation="MLRRVYDWCVAAADKPYATWILGIVSFAESSFFPVPPDVMLIPM
                     AMARPDRAWTYAAVCTLTSVAGGVFGYFIGAALYDTVGQWLIQLYGYGDKVEAFRAAY
                     AQYGALIILLKGLTPIPYKIVTITSGFAGYNILLFVVLSLITRGMRFFVEAFLLNRYG
                     ARARLIIEKRLGLWAGLAAATIVVGFIIVVRVF"
     gene            complement(2032..3615)
                     /locus_tag="VNY79_05280"
     CDS             complement(2032..3615)
                     /locus_tag="VNY79_05280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HWX71891.1"
                     /translation="MAKTEADERLNRALTAFLRQEVQAPASAVTDFLDMIIEDSPEGL
                     LADLNRMRTASVQLNAFVKSLIRDSASDRRADETLEAFQRRLRHDLRTPLNAIKGYSE
                     LLIEDLEADAGQSLRADLTKLKASADQLLGQIDAMTALARHETAEPAEAAKARQLDIV
                     ADVLRSLEPLPAGSAAQGPRHSSRILVVDDNSSNRDVLERRLAREGHHVTCAANGATA
                     LDLVVRQEFDLILLDLIMPEMSGFEVLRRLKAAAHTNHIPVIIISALDELDSTVRCIE
                     AGAEDYLAKPFNPILLRARIGASLERKWLRDREKKFVADLEREKERSEALLLNILPQG
                     IVNRMRRGETAIADQVAEATILFCDVVGFTTLSEALTPDRTIDFLSRIFSAFDRLAAE
                     FKVEKIKTIGDAYMAAAGIPEAQPDHADRIAALAPRMLEAVAAVAAATGLKLQARIGV
                     HTGPVVAGVIGTHKFVYDVWGDTVNTASRMESHSLPGRIQVSAATRKALGDRFKLERR
                     GIIKVKGKAAMETYFLNER"
     gene            complement(3692..4066)
                     /locus_tag="VNY79_05285"
     CDS             complement(3692..4066)
                     /locus_tag="VNY79_05285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008839927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HWX71892.1"
                     /translation="MTKVLLVEDNEMNRDMLSRRLIRRGFEVIFAVDGKQGVDAARRE
                     KPDIILMDMSLPVMDGWEATRCVKADDATRSVPVIGLTAHAMSGDREKAMEAGCDDYD
                     TKPVELDRLIGKIERLLGLAKS"
     gene            complement(4098..>5125)
                     /locus_tag="VNY79_05290"
     CDS             complement(4098..>5125)
                     /locus_tag="VNY79_05290"
                     /inference="COORDINATES: protein motif:HMM:NF012301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HWX71893.1"
                     /translation="DTGIGMTEEQLGRLFQAFSQADASTTKKYGGTGLGLAISRRFCQ
                     LLGGDITVTSRPGEGSTFTITLPVHTETPAQIAPAKVPRIVADAGNGATVLIVDDDPA
                     ARELLAANLKGAGYRLVQAANGEEALTLARTLRPDAITLDVMMPKPDGWDVLATLKAD
                     PDLCDIPVVIVTVAPERGIGLSLGAVEVLTKPVDRSRLTALINRLVRRDGPVLVVEDD
                     ADTRDMMRHTIERMGLAVAETANGRLALSWLGDNPPPAIILLDLMMPEMDGFAFLDAL
                     AARADWREIPIIVVTAKQLSAGERERLSRQAQKVMEKATATRVDITAAIGAAVRRRPA
                     RVAAAQS"
BASE COUNT          802 a         1703 c         1725 g          895 t
ORIGIN      
        1 atcttgcgcg ggtcctccag gcgcgcatcg acgatctcga tcgccggcac cacgtactcg
       61 gtcgcgcgca gcacgtcggg caggcggacg ccggggccgc gcaatggctt gccaaggacg
      121 aaggcgagct cgatctcgac ccgcggcacg cagtagttct cgtgcgcaat gcgggccccg
      181 tcggcgatca tcatcgagtc gagcaaatgc ccgtaatcgg gctcgtcaat ctgcgaggaa
      241 cgctgcatcg ccttcgaggt gagcccgacc ttgtggccga tgagcttggc gccggcgtcg
      301 attttgcgct ccagcacctc ggttgagatc gcatacgcat cctcgatggt cattgatggc
      361 caggtcttgg aaagctgggc cgcctgcttg cgctcctttt ccgcagcgag aagcacatcg
      421 gcggccttgc ggcgatcggc ttgcgacatc atggccgcga cagactccct aggcgtttga
      481 ttggaggagt ggcggccggc ttcccgaaag catcatgctt cagccgaatt actggcacag
      541 cgcgcgggcg aggatcgttt cggtttcgac ccggcactcg ccttggcttt ggcccgacag
      601 ccacatcgtc gtgacgcact tctccgacga actgacgtcg agcggcttgc cggtattaaa
      661 gcccttgccg cggcaggcgt tcaccgcggc ttccagacaa tcgggcgcgc cgttcggcgc
      721 cttcggacag gcctggtgca cctcgatcgc ccgcgtgccg ggcaaccgca cgatcgcggt
      781 cgcggcgtcc ttggtcgcgg tggcagcgtt cttcattgcc tccttggcgg cgtcgcgctg
      841 gccctggttg aagtcgtcga gcttcttctg ggcgtctttc atgttgctgc cgaacttggc
      901 gaccgattcg ttccaccacc ggccaaactc atggaggaag ccggggttgg cgtcagcggt
      961 ggacggcggt gctgacgggg cagcgggacc ggccgcggca ggcggcggcg gtgccggcgc
     1021 ggcggtaatc gcgggcgatg cagggacagg ctgcggggtc gccgctggcg ccgcggcgct
     1081 cgccggcggc gcaggggccg gctgcggcgc cgcggtcgtg ggctgcgacg gcgcaggagg
     1141 cgcagcctgc tgctgcgcgg ctggcgccgc cggggccggc gctgtagcgg ccgggccggt
     1201 cggagccggg tgattgtcct cggcaagcgc aatgccgccg gcggcggccc ctaacagggc
     1261 cgcggccaca agccacgcgg cgggggttcc cgcaatgcgg cacgctcgat cccggttcgt
     1321 catcacagcc gatcgcgaca ggatttgtgg cgccgccaat gcgcaccgcg gattcggcgc
     1381 cgacggttca gaatacccgc accacgatga taaagccaac cacgatcgtc gccgcggcga
     1441 ggccggccca taggccgagc cgcttctcga tgatcaaccg cgcgcgggcg ccgtagcggt
     1501 tgagcagaaa ggcctcgacg aaaaagcgca tgcctcgcgt gatgagggac agcacgacga
     1561 acaagaggat gttgtagccg gcaaagcccg aggtgatggt cacgatcttg tacgggatcg
     1621 gggtgagccc tttgagcagg atgatcagag cgccgtattg cgcgtacgcc gcgcggaacg
     1681 cctcgacctt gtcgccgtag ccgtagagct ggatcagcca ctgcccgacc gtgtcataga
     1741 gcgccgcgcc gatgaaatag ccgaacacgc cgccggcgac cgacgtcagg gtgcaaaccg
     1801 cggcgtaggt ccacgcccgg tccggccgcg ccatggccat cgggatcagc atcacgtccg
     1861 gcggaacggg aaagaacgag ctctcggcga acgacacgat cccaaggatc caggtcgcat
     1921 acggtttgtc ggcggcagcg acacaccaat cgtagacgcg gcggagcatg ggacgtgtgc
     1981 ttagcgggcg ggccgcctgt tgtccaatgg atgcttcccc gcgcgcccag gtcagcgttc
     2041 gttgaggaaa taggtctcca tcgccgcctt acccttgacc ttgatgatgc cgcgccgctc
     2101 cagcttgaag cggtcgccga gcgcctttcg ggtcgcggcg gaaacctgaa tgcggcccgg
     2161 cagcgaatgg gattccatgc ggcttgcggt attcaccgtg tctccccaca cgtcgtagac
     2221 gaacttgtgc gtgccgatga cgccggcgac gaccggaccg gtgtgcacgc cgatgcgcgc
     2281 ctgcagcttc agccccgtcg ccgcggcgac ggcggcgacc gcctcgagca tacgcggcgc
     2341 cagcgcggcg atgcggtcgg cgtggtcggg ttgcgcttcg ggaatcccgg ccgccgccat
     2401 gtaggcgtcg ccgatggtct tgatcttctc caccttgaat tctgcggcca gacgatcgaa
     2461 ggcggagaag atcctgctga gaaagtcgat ggtccggtcg ggcgtcaatg cctcgctgag
     2521 cgtggtgaac ccgacgacgt cgcagaacag aatcgtcgcc tcggcgacct ggtcggcgat
     2581 ggcggtttcg ccgcgccgca tgcggttgac gatcccctgc ggcaggatgt tgagcagcaa
     2641 ggcttccgaa cgctccttct cccgctccag gtcggcgacg aatttcttct cccggtcgcg
     2701 cagccatttg cgctccagcg acgcgccgat acgggcgcgc agcaggatcg ggttgaaagg
     2761 cttggcgagg tagtcctcgg cgccggcttc gatgcagcgc acggtgctgt cgagctcgtc
     2821 gagcgccgag atgatgatga ccggaatgtg gttggtatgc gccgccgcct tgagccggcg
     2881 cagcacctcg aagccgctca tttccggcat gatgagatcg agcagaatga gatcgaattc
     2941 ctgccgcacg acgaggtcga gcgcggtcgc gccgtttgcc gcgcatgtga cgtgatgccc
     3001 ctcgcgcgcc aggcggcgtt cgagcacgtc gcggttggag gaattgtcgt caacgacgag
     3061 gatgcggctc gaatgccgcg ggccctgagc cgcgctgccc gccggcagcg gctcgagcga
     3121 gcgcaacacg tcggcgacga tgtcaagttg ccgcgccttg gcggcctcgg ccggttccgc
     3181 ggtttcgtgc ctagccaatg cggtcatggc gtcgatctgc ccgaggagct ggtcggcgga
     3241 ggccttcagc ttggtgagat cggcacgcaa cgactgcccg gcgtccgcct ccaggtcctc
     3301 gatcagaagc tcgctgtacc ccttgatggc gttgagcgga gtccgcaggt cgtgacgcag
     3361 ccgccgctga aacgcttcga gcgtttcgtc cgcccggcga tcggacgctg aatcccggat
     3421 caagcttttc acgaacgcgt tgagctggac gctcgcagtg cgcatccggt tgagatcggc
     3481 gagcaggccc tcgggcgagt cctcaatgat catatcgagg aaatcggtga ccgcgctggc
     3541 cggcgcctgc acctcctggc gcaggaacgc ggtcaatgcg cgattgaggc gctcatccgc
     3601 ttccgtcttc gccaagaacc ctcccaagag cgccgtctag gccgtcacgc gccgttcgct
     3661 gggctgcatc atccccgcac tgtttcttcg gctagctctt ggccaagccg agcagacgct
     3721 cgatcttgcc gatcagccgg tcgagctcga ccggcttggt gtcatagtcg tcgcagcccg
     3781 cctccatcgc cttttcgcgg tcgccgctca ttgcatgcgc cgtgagcccg atgaccggca
     3841 cgctgcgcgt ggcgtcgtcc gccttgacgc atcgagtggc ctcccatccg tccatgacgg
     3901 gcaggctcat gtccatcagg atgatgtcgg gcttttcccg ccgcgccgcg tcgacaccct
     3961 gcttgccgtc caccgcgaaa atcacctcga agccgcggcg aatgaggcgg cgcgatagca
     4021 tgtcgcggtt catctcgttg tcctcgacca gcaaaacctt cgtcatggcc tccctcttat
     4081 ccggctgttc gcctgcctca actttgcgcc gccgccacgc gcgccggccg gcgccgtacg
     4141 gccgcgccga tggccgcggt gatatcgacg cgcgtcgccg ttgccttctc catcaccttc
     4201 tgcgcctgcc gcgagaggcg ctcgcgttcg cccgccgaga gctgcttggc ggtgacgacg
     4261 atgatcggta tctcgcgcca atcggcgcgg gcggcaagcg cgtcgaggaa agcgaatccg
     4321 tccatttccg gcatcatcaa atcgagcagg atgatcgccg gcggcggatt gtcgccgagc
     4381 cacgacagcg ccaggcgacc attggcggtc tccgctaccg ccagccccat tctctcgatc
     4441 gtgtggcgca tcatgtcgcg ggtatcggcg tcgtcctcca cgaccagaac gggcccatcg
     4501 cggcgcacca ggcggttgat cagcgccgtc agccgtgatc ggtcgaccgg ctttgtcagg
     4561 acttcgacgg caccgagcga aagcccgatg ccgcgctcgg gcgcgaccgt cactatgacc
     4621 accggaatgt cgcagaggtc gggatcggcc ttgagcgtcg ccagcacgtc ccagccgtcg
     4681 ggtttcggca tcatgacgtc gagggtgatc gcgtcggggc gcagcgtgcg cgccagagtg
     4741 agagcctcct cgccgttcgc cgcctggacc agccgatagc cggcgccctt taggttggca
     4801 gcaagcagct cccgcgccgc cggatcgtca tcgacaatca gcaccgtggc gccgttgccg
     4861 gcatcggcca cgatgcgcgg caccttcgcc ggagcgattt gcgccggcgt ttcagtgtgc
     4921 accgggagcg tgatcgtgaa agtcgatcct tcaccgggcc ggctggtcac cgtgatatcg
     4981 ccgccgagca gctggcagaa acgccgggag atcgccaggc cgaggccggt gccgccatac
     5041 ttcttcgtgg ttgaggcatc cgcctggctg aacgcctgga acaggcggcc gagctgctcc
     5101 tcggtcatgc cgatgccggt atccg
//
LOCUS       DATMQB010000172         2503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2533093, whole genome shotgun sequence.
ACCESSION   DATMQB010000172 DATMQB010000000
VERSION     DATMQB010000172.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2503
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2533093"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..426)
                     /locus_tag="VNY79_05295"
     CDS             complement(<1..426)
                     /locus_tag="VNY79_05295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HWX71894.1"
                     /translation="MHGTRKSVDDARLEAYAMRLEDIDVSRPELFRSNTMWPYFERLR
                     KEAPVHYCPLSRVGPYWSVTKYKDIMHVETNHGVFSSDIDLGGIGIQNVKADYRRDSF
                     IAMDEPRHGQQRKTVAPMFLPENLDKLANTIRVRAREILD"
     gene            complement(479..2239)
                     /locus_tag="VNY79_05300"
     CDS             complement(479..2239)
                     /locus_tag="VNY79_05300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX71895.1"
                     /translation="MSVLPRDFVPAVAPSGSDLIAPDCRGLNFWAIDRAIRDLLTLYL
                     DEAALRHFTPYFERLGELAGGRLDELALQADKRTPILHHRDRFGRDADWVEYHPAYRE
                     MERIGFSEFGLHAMSRRAGALGWPGTAPPLAKYALQYLFAQAEFALLCPLSVTDTSIL
                     LIQKYGDERLKQRYLPGMLSQDMDALRKGAQFMTEKAGGSDLSGIELAAHRTGGHWEL
                     WGDKWFCSCADHDVVLLLARCQGAPAGNAGLSLFVMPRRLEDGSRNRYRVVRLKDKFG
                     SRSMAAGEVIMEGAVAYILGEPGRGLRQMMDQVNLSRLSHGFRAAGMMRRCLNEALQV
                     ARHRRTFGRALIDHPMARRQLLKLMVPTEQALSVAIAAAVAMTRGDEAQLRILTPLVK
                     YRACRDNVPVATGAMEMRGGNGYIEDWANAKLIRDAHLGLIWEGTSSVNALDIIRRAV
                     GRERAHAALAGALHGRIEQAPIPEAFRDRLAALIDRAVGFAETVAKLPSAEAACRRAA
                     SALYHVTSAALLAAEGAELGSRGGDARRLLLARLVLDHRLGNTDPFVLPDDAWENAVS
                     GKLFGDEPVPLAEAAALLAA"
BASE COUNT          412 a          813 c          865 g          413 t
ORIGIN      
        1 atccaggatt tcgcgggcgc ggacgcggat cgtgtttgcc agcttgtcga gattttccgg
       61 caggaacatc ggcgccacgg tcttgcgctg ctggccgtgc cgcggctcgt ccatggcgat
      121 gaagctgtcg cggcggtagt ccgccttgac gttctgaatg ccgatgccgc cgagatcgat
      181 gtcggaggaa aagaccccgt ggttggtctc gacatgcatg atgtccttgt acttggtcac
      241 cgaccagtac gggccgacac ggctcagcgg acagtagtga accggagctt ccttgcgcag
      301 ccgttcgaaa tacggccaca tcgtattcga acgaaacaat tccggacggc tcacgtcgat
      361 gtcttcgagc cgcatcgcgt aggcttcgag gcgcgcgtcg tcgactgatt tgcgggtacc
      421 atgcatgaca ctgtccctcc ggatcgcttg gctgcgcgat gtcctcggtg ctcgaagttt
      481 aggccgccaa cagagccgcg gcttccgcca gcggcaccgg ctcgtcgccg aacagtttcc
      541 cactcactgc attctcccag gcgtcgtcgg gcaaaacgaa cggatcggtg ttgcccagcc
      601 gatggtcgag caccagccgc gccagcagca ggcgccgggc gtcgccgccg cggctcccta
      661 gttcggcgcc ctcggcggcg agcagcgcgg cgctggtcac atggtagagg gcgctcgcgg
      721 cacggcggca ggcggcttcg gcactcggta gcttcgcaac cgtctccgca aacccgacgg
      781 cccgatcgat cagcgcggcg aggcggtcgc ggaacgcttc aggaatcggc gcctgctcga
      841 tccgtccgtg cagcgctccg gcgagcgccg cgtgcgcgcg ctcgcgaccg acggcgcggc
      901 gaatgatgtc gagtgcgttg acgctcgatg tgccttccca gatgagaccg agatgggcgt
      961 cgcggatgag cttggcgttg gcccagtcct cgatgtagcc gttgccgccg cgcatctcca
     1021 tggcgcccgt ggcgaccggc acgttgtcgc ggcaggcgcg gtacttcacg agcggggtga
     1081 ggatgcggag ctgcgcctcg tcacccctgg tcatcgccac ggccgccgcg attgcgaccg
     1141 agagcgcctg ttcggtcggc accatgagct tgagcagctg ccgccgcgcc atcgggtgat
     1201 cgatcagggc gcggccgaag gtgcggcggt ggcgcgcgac ctgcagcgcc tcgttcagac
     1261 agcgccgcat catgccggcg gcgcggaagc cgtgcgacag ccgcgagagg ttgacctgat
     1321 ccatcatctg cctgaggccg cggccgggct cgccgaggat ataggcgacg gcgccttcca
     1381 tgatgacctc gccggcggcc atggagcgcg agccgaactt gtccttgagc cgcacgaccc
     1441 ggtagcggtt gcggctgccg tcctcgagcc gtcgcggcat gacgaacagc gacaggccgg
     1501 cattgccggc gggtgcgcct tggcagcggg cgagcagcag cacgacgtca tggtcggcgc
     1561 aggagcagaa ccatttgtcg ccccacagct cccaatggcc gccggtgcga tgggccgcaa
     1621 gctcgatccc ggaaaggtcg gagccgccgg ccttctcggt catgaactgc gcgcccttgc
     1681 gcagggcgtc catgtcctgg ctgagcatgc ccggcaggta acgctgcttc aggcgctcat
     1741 cgccgtactt ctggatcagc aggatcgaag tatcggtcac ggacagcggg cagagcagcg
     1801 cgaactcggc ctgggcgaac aggtattgca gcgcgtattt ggcgagcggc ggcgccgtgc
     1861 ccggccagcc gagggcgccg gcccgccgcg acatcgcgtg caggccgaac tcggagaagc
     1921 cgatgcgctc catctcccgg taggccgggt ggtattcgac ccagtcggcg tcgcggccga
     1981 agcggtcgcg atggtgcagg atcggcgtgc gcttgtccgc ctgtagcgcc agttcgtcga
     2041 ggcgcccgcc ggcgagctcg ccgagacgct cgaaataggg cgtgaaatgc cgcagcgccg
     2101 cctcgtccag atagagggtc aacagatcgc ggatggcgcg gtcgatcgcc caaaagttca
     2161 gcccgcggca atcgggcgca atcaggtcgg agccgctcgg ggcgacggcg ggcacaaaat
     2221 cgcgcggcag gacgctcatg gcagcggttc ctcggttcga gcgtttagtt caacaggctc
     2281 gtttcactat atcagatcag ccagggtcgc atgggggcat ccgcacgagg gtcagtggcg
     2341 cattgcccga ccagggcggc cgcgtctctc cgccaacacc gggccggtga agtgtgataa
     2401 agggttccat ccggcaagaa acgtcaaact ccaattcagc cgactgggag gaaacagatg
     2461 gctcggattc atcggcgaaa gctgcttcag ctctccggcg ccg
//
LOCUS       DATMQB010000173         2556 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1913769, whole genome shotgun sequence.
ACCESSION   DATMQB010000173 DATMQB010000000
VERSION     DATMQB010000173.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2556)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2556)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2556
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1913769"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..205
                     /locus_tag="VNY79_05305"
     CDS             <1..205
                     /locus_tag="VNY79_05305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="indole-3-glycerol-phosphate synthase TrpC"
                     /protein_id="HWX71896.1"
                     /translation="CERLARLIPPGRVIIGESGIFSPDDLARLAAAGIATFLVGESLM
                     RQNDVAAATRALLARKPALASAR"
     gene            212..700
                     /gene="moaC"
                     /locus_tag="VNY79_05310"
     CDS             212..700
                     /gene="moaC"
                     /locus_tag="VNY79_05310"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019171159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HWX71897.1"
                     /translation="MARRSALTHLSAGGAAHMVDVSAKPATEREAVAAGRVVMQPETL
                     DIVRKGDAKKGDVLGAARIAGIMAAKRTHDLIPLCHPLSITKAEVDIRPDAALPGLEV
                     TARVKVAGKTGVEMEALTAVAVACLTIYDMVKAVDRGMRIEGIRLIEKRGGRSGHFRA
                     KE"
     gene            704..1912
                     /gene="glp"
                     /locus_tag="VNY79_05315"
     CDS             704..1912
                     /gene="glp"
                     /locus_tag="VNY79_05315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1990586 - divisome complex [Evidence
                     IEA];
                     GO_function: GO:0061599 - molybdopterin molybdotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gephyrin-like molybdotransferase Glp"
                     /protein_id="HWX71898.1"
                     /translation="MALLSVAEALERVLAHAAPLPAEHAVLSEAYGRVLTDDLKALRT
                     QPPANVSAMDGYAVRAADVTHASVRLKIIGEVAAGRPFAQVVGPDQAARIFTGGVLPA
                     GADTVVIQEFTKRNGDWVDIQGPTARGRHIRAEGLDFKAGDVLLSAGRRLTTRDLALA
                     AAMNHPRIPVHRRPKVAIFATGDELVPPGTQPQPGQIVSSNTFALAALARAEGADVAD
                     LGIVGDRLDDTVAAVRGARERRADILVTSGGASVGEYDLVQSALAAEGVELSFWKLAL
                     RPGRPLMHGRLGAIQVLGVPGNPVSAFVCALLFMVPLIRRLAGRNDTATRTEIAALGC
                     DLPENDERADYLRATLKNGADGPVATPFSVQDSSMMAPLAKADCLVIREPYSPAAKAG
                     SPCTIMRLAL"
     gene            complement(2001..>2556)
                     /locus_tag="VNY79_05320"
     CDS             complement(2001..>2556)
                     /locus_tag="VNY79_05320"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="autotransporter domain-containing protein"
                     /protein_id="HWX71899.1"
                     /translation="TNGGRGWFGVVGGGCDYQLNVFGAGLVIGGFGDFDFMHIHGDFS
                     PSSSTVVGDENERWAWAAGGRIGYLVTPTVLTYFNGGYAQTRFDQINFSFSAAPATPS
                     PFVIPGHNYRGWFIGGGMEFALTVLPIPGFFWRNEYRYSSYQSADLAILATPPGVPIG
                     LAEHMRSQVQTLATELVYKLNWTP"
BASE COUNT          435 a          860 c          854 g          407 t
ORIGIN      
        1 ctgcgaacgc ctggcgcggc tgattccgcc cgggcgcgta atcatcggcg agagcggcat
       61 tttctcaccc gacgatctcg cccggctcgc cgcggcgggg attgcaacct tcctcgtcgg
      121 cgaaagcctg atgcggcaga acgacgtcgc cgcggcaacg cgtgcgctcc tcgcgcgcaa
      181 gcccgcgctt gcttctgccc ggtgaaggcc agtggcgcgg cgttcggcat tgacgcatct
      241 ttccgccggt ggcgcggcgc atatggtcga cgtgtcggcc aaacccgcga cagagcgcga
      301 ggcagtcgcc gcgggccgcg tggtgatgca gcccgaaacg ctcgacatcg tgcgcaaggg
      361 cgatgccaag aagggcgacg tgctcggcgc cgcccgcatc gccggcatca tggccgccaa
      421 gcgcacgcac gacctcattc cgctgtgcca cccgctttca atcaccaagg ccgaggtcga
      481 catcaggccg gatgccgccc tgcccggcct ggaggtaacg gcccgcgtca aggtcgcggg
      541 caagaccggc gtcgagatgg aggcgctcac tgccgtggcg gtggcctgcc tcaccatcta
      601 cgacatggtg aaggcggtcg accgtggcat gcgcatcgaa ggcatccggc tcatcgagaa
      661 gcgcggcggc cgcagcggcc attttcgcgc aaaggagtag aacgtggcgt tgctgtcggt
      721 cgccgaggcg ctcgaacgcg tgctggcgca cgcggccccc ctgcccgccg aacatgccgt
      781 gctctccgag gcctacgggc gcgtgctcac ggacgatctc aaggcgctgc ggacgcagcc
      841 gccggccaac gtctcggcca tggacggcta tgccgtgcgc gccgccgacg tgacccacgc
      901 gtcggtgcgg ctcaagatca tcggcgaggt cgcggcgggc cggccgtttg cgcaggtcgt
      961 cggtccggac caggccgcgc gcattttcac cggcggcgtg ttgccggcgg gcgccgacac
     1021 cgtcgtgatc caggagttca ccaagcgcaa cggcgactgg gtcgacatcc aggggccgac
     1081 cgcaaggggg cgccacatca gggcggaagg cctggacttc aaagcgggcg acgttctgct
     1141 gtccgccggg cgcaggctga ccacccggga tcttgcgctc gctgccgcga tgaatcaccc
     1201 gcgcattccc gtgcaccgcc ggccgaaagt tgcgatattc gcgaccgggg acgaactggt
     1261 gccgcccggt acgcagccgc agcccgggca gatcgtctcc tcgaacacgt ttgcgctcgc
     1321 ggcgctggca cgcgccgagg gagcagacgt cgccgatctc ggcattgtcg gcgaccggct
     1381 cgacgacacg gtagcggcgg tccgcggcgc gcgcgagcgg cgcgcggaca ttctcgtcac
     1441 tagcggcgga gcgtccgtgg gcgaatacga cctcgtccag tcggcccttg ccgcagaagg
     1501 cgtggaattg tcattctgga aactggcctt gcggcccggt cgtcccttga tgcatgggcg
     1561 cctcggcgcc attcaggtgc ttggcgttcc cggcaatccg gtctcggcgt tcgtgtgcgc
     1621 tcttctgttc atggtgccgt tgatccgccg cctcgccggc cgcaacgaca ccgcgacccg
     1681 gaccgaaatc gccgcgctcg gctgcgactt gccggaaaac gacgagcgcg cggactattt
     1741 gcgtgcgacg ctcaagaatg gagcggatgg cccggtcgcg acgccctttt cggtgcagga
     1801 cagttccatg atggcgccgc tggcgaaggc cgattgcctg gtgatccgcg aaccctattc
     1861 gcccgccgcc aaggctggca gcccttgcac gatcatgcgg ctggcgcttt agcggctcgg
     1921 cgcttttgtt gctccggccc gaggtcgaat gagcgcgctt actcgatcgc cggacgcaag
     1981 gatcgcgaac gtcgaactga tcagggcgtc caattcagct tgtagacgag ctcggtcgcg
     2041 agcgtctgca cctggctgcg catgtgctct gccaagccga tcggcactcc cggcggagtg
     2101 gcgaggatcg caagatccgc actctgatag ctcgaatagc gatattcgtt gcgccaaaag
     2161 aaacccggga tcgggagcac cgtcagcgca aattccattc cgccgccgat gaaccagccg
     2221 cgatagttgt gccccgggat gacaaaggga gaaggtgtcg ccggcgcggc cgagaacgag
     2281 aaattgatct gatcaaagcg agtctgggcg tagccgccgt tgaaataggt cagcaccgtg
     2341 ggcgtcacca gataaccgat gcggccgccc gccgcccagg cccagcgctc attttcgtcg
     2401 cctacaacag ttgaggaaga cggcgaaaaa tcgccgtgaa tatgcatgaa atcaaaatcg
     2461 ccgaatccgc cgatgaccag gccggcgcca aatacgttca actgatagtc gcagccgccg
     2521 ccgaccaccc cgaaccatcc gcgaccgccg ttggtg
//
LOCUS       DATMQB010000174         4450 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1913777, whole genome shotgun sequence.
ACCESSION   DATMQB010000174 DATMQB010000000
VERSION     DATMQB010000174.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4450
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1913777"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..851)
                     /locus_tag="VNY79_05325"
     CDS             complement(<1..851)
                     /locus_tag="VNY79_05325"
                     /inference="COORDINATES: protein motif:HMM:NF017215.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HWX71900.1"
                     /translation="MSGTASLRIGIDTGGTFTDIVCVDDKSGAMRVTKVASTPSNPAV
                     ALVRGVQAILGQCGAGVDDLAVLAHGTTVATNALLQDDIAGLGLIVTEGFRHILEIAR
                     QSVPEGYGNSYFWVKPERLVPLRYVREVGGRLDFLGAELRQLDEASVRAAARFFRAQS
                     IATIGICLMHSYANAAHERRTAEIVAQEYAGCTLSLSSDVLPEYREYERAVTTLVDAF
                     IKPHMSRYLDRIRDELGQELNEKPFLVMQSSGGVASPDQVMRKPITTALSGPAAGALG
                     SAVIAEIA"
     gene            1275..2444
                     /locus_tag="VNY79_05330"
     CDS             1275..2444
                     /locus_tag="VNY79_05330"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HWX71901.1"
                     /translation="MSGNVRFNFMHFLPYVHLPENHKEFKSLWVDFSNKYYDPKRGHA
                     LYQRYLSELVLADRLGFDAIVVNEHHNTAYSMMAAPNLIASAIIPQTRNAKICVWGTP
                     PNLEYPNRLAEEYAMLDVMSEGRLEVAFPLGTGMEYWANPINPTTARERHKESIAIIL
                     QAWTQDGPTKFFGEFYTYRFLNPWPRPYQQPHPPCYIVGTGSPETVELAAELGFGYSA
                     VFVTKQRALELNRKLRERASSYGRTIRPDQLPLGVITYVAETKQKAEDEGIEHIRYFF
                     EDALRTTPEFLAPPGYLSIEQLKMRAALADKLHGKFDFDAVNEAFFCAVGTPDQVVDQ
                     LSQWGETMGTNHFNLMAAVGNMPNWKVVKNLSLIAEEVIPRMRATAPVARRAAAE"
     gene            2459..3223
                     /locus_tag="VNY79_05335"
     CDS             2459..3223
                     /locus_tag="VNY79_05335"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HWX71902.1"
                     /translation="MTEFKRETHTVNGVKIILLTAGSGEPLLFLHGAGTFHGFEFAKP
                     WADKFRVLLPFHPGFGESADDPAMNDIHDYVMHYVELLDLLGLDKVNLVGFSLGGYIA
                     AKFAMEHGHRVRKLVLVGPAGLRDDKHPTADVLGLPGEQLPAMLVSNFEVIKPYLPTK
                     PDLDFIGDRYREMTTTARLMWEHPYDSKLPRYLHRLTMPTLLVWGEEDRLIPSQQAET
                     WRRFIPKADIKIFKGAGHLVLDEKREASDAVQNFLA"
     gene            3367..3870
                     /locus_tag="VNY79_05340"
     CDS             3367..3870
                     /locus_tag="VNY79_05340"
                     /inference="COORDINATES: protein motif:HMM:NF023010.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3237 domain-containing protein"
                     /protein_id="HWX71903.1"
                     /translation="MATTRPLSELLPKEMTELRAQPLFSLLLEVQPPIVVGKTPALDR
                     RIGIISGGRFEGERLRGTLLPGGSDWQTVRGGDGAWLINVRIVLKTDDDAIIGMPYTG
                     IRHGPKEVLDRIARGEVVKATDYYFRIVASFETSSEKYGWLNNIVSIGVGHRLPEGPI
                     YQMFEVL"
     gene            4097..>4450
                     /locus_tag="VNY79_05345"
     CDS             4097..>4450
                     /locus_tag="VNY79_05345"
                     /inference="COORDINATES: protein motif:HMM:NF019301.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DoxX family protein"
                     /protein_id="HWX71904.1"
                     /translation="MSGWAQNFDLTDGVNVLRLICGLFFIPHIVGKFTEPATLNFFKA
                     AKFNPPATWMYIAGAIETVLTICLVFAIYTPFVAIIAAFHLFVAGAATYKVTKKWIWV
                     IGGIEYCVFWMLCCIV"
BASE COUNT          830 a         1445 c         1399 g          776 t
ORIGIN      
        1 gcgatctcgg cgatgacggc gctgccgagc gcgccggcgg ccggcccgga aagcgccgtc
       61 gtgatcggct tgcgcatgac ctggtcgggg ctcgcgacgc cgccgctcga ctgcatgacc
      121 agaaacggct tctcgttgag ctcttgcccc agctcgtcgc ggatgcggtc gaggtagcgg
      181 ctcatatgcg gcttgatgaa cgcatcgacc agcgtcgtca ccgcccgctc gtattcgcgg
      241 tattcgggaa gcacgtccga cgagagcgac agcgtgcagc ccgcatattc ctgcgccacg
      301 atctcagccg tgcggcgctc atgcgcggcg ttggcgtagg agtgcatgag gcatatgccg
      361 atcgtggcaa tgctctgggc gcgaaagaag cgggcggcgg cgcgcacgct cgcctcgtcg
      421 agctgccgca gctcggcgcc gagaaagtcg aggcggccgc cgacctcgcg cacatagcgc
      481 agcggcacca ggcgctcggg cttcacccag aaataagaat tgccgtagcc ctcgggcacg
      541 gattggcggg cgatctcgag aatgtggcgg aagccttcgg tgacgatcag gccgagaccg
      601 gcgatgtcgt cctgcagcag cgcattggtc gcgaccgtcg tcccgtgcgc gagcacggcg
      661 agatcgtcga cgccggcgcc gcattggccg agaatggcct ggacgccgcg caccagcgcc
      721 accgccgggt tcgacggcgt gctcgcgacc ttggtcacgc gcatggcgcc ggatttgtcg
      781 tcgacgcaga cgatgtcggt aaaggtgccg ccggtatcga tgccgatccg caacgaagcc
      841 gtgccgctca tccttgctca gcttcccctg cggctccgat cgaacgcctc gaccgcgaat
      901 ggcgcagacc gtttgacaat gtaccccaat ccatcggccg ttcgctatcc gaaccctgcg
      961 aaacggaagg gcggttcgct attcgaaccc agcgcgattg ggcaggtgcc cgataatata
     1021 ccagcatgtg caaagttcgc gagcactccg ccgcgtaccg cgcacggtgc gtcagcaaaa
     1081 cgccgaatcc gacttgacag caagttgcgg cctcataaac tcgacagcga aaaactgaag
     1141 aaacaaaaca gcttgcggag gacacggctg cttgctcggg gacgcgaagc gtgcagcgtg
     1201 acattcccca aagctggtga tgccgccggc ccgcccggac cggcctcgtg aatgaatcga
     1261 aacgggaggt agcgatgagc ggcaatgttc gcttcaattt catgcatttt cttccctacg
     1321 tgcatctccc tgagaaccac aaggagttca agtcgctgtg ggtggatttc tcgaacaaat
     1381 attatgatcc caagcgcggc catgcgctct accagcgcta tctgtccgag ctcgtgctcg
     1441 ccgacaggct cggcttcgac gcaatcgtcg tcaacgagca tcacaacacc gcctacagca
     1501 tgatggcggc gccgaacctc atcgcctccg cgatcattcc gcagacccgc aatgccaaga
     1561 tctgcgtgtg ggggacgccg ccgaacctgg aatacccgaa ccgcctggcc gaagaatacg
     1621 ccatgctcga tgtgatgtcg gaggggcgcc tcgaggtagc gttcccgctc ggcaccggca
     1681 tggagtactg ggccaatccc atcaacccaa cgacggcgcg cgagcggcac aaggaatcga
     1741 tcgccatcat cctgcaggcg tggacgcagg acgggccgac caaattcttc ggtgagttct
     1801 acacctaccg gttcctcaat ccgtggccgc ggccgtacca gcagccgcat ccaccctgct
     1861 acatcgtcgg caccggcagc ccggaaacgg tcgagctcgc cgccgaactc ggcttcggct
     1921 actcggcggt gttcgtgacc aagcagcgcg cgctcgagct caatcgcaag ctgcgtgaac
     1981 gcgcgtcgag ctacgggcgc accatccgcc ccgaccagct gccgctcggc gtgattacct
     2041 acgtggccga gaccaagcaa aaggccgagg acgaggggat cgagcacatc cgctatttct
     2101 tcgaggatgc gctacgcacc acgccggaat tcctcgcgcc gcccggctat ctgtccatcg
     2161 agcagctgaa gatgcgcgcg gcgctggccg acaagctgca cggcaagttc gacttcgacg
     2221 ccgtcaacga agccttcttc tgtgcggtgg gaacgcctga ccaggtcgtc gatcagctca
     2281 gccagtgggg cgagaccatg ggcaccaacc atttcaacct gatggcggct gtgggcaaca
     2341 tgccgaactg gaaggtggtc aagaacctca gcctgatcgc cgaggaggtg atcccgcgca
     2401 tgcgcgctac ggcgccggtc gcgcgccgcg ccgcggccga atagaagcgg gatcaaccat
     2461 gaccgaattc aaacgcgaga cgcacaccgt caacggggtg aagatcatcc tgttgaccgc
     2521 cgggagcggg gagccgctgc tgtttctgca tggggccggc acgttccatg gcttcgagtt
     2581 cgccaagccc tgggccgaca agttccgggt ccttcttccg tttcatccgg gcttcggcga
     2641 atccgccgac gatccggcga tgaacgacat ccacgactac gtcatgcact atgtcgagct
     2701 gctcgacctc ctcgggctcg acaaggtcaa cctggtcggg ttctcgctcg gcggctacat
     2761 cgccgccaag ttcgccatgg agcacggcca ccgcgtgcgc aagctggtcc tggtcgggcc
     2821 ggcgggactg cgcgacgaca agcatccgac cgccgacgtg ctggggctgc cgggtgagca
     2881 attgccggcg atgctggtgt cgaatttcga ggtgatcaag ccgtatttgc cgaccaagcc
     2941 ggacctcgac ttcatcggcg accgctaccg cgaaatgacc accacggcgc ggctcatgtg
     3001 ggagcacccc tacgactcga agctgccgcg ctatctccac cgcctcacca tgccgacgct
     3061 gctggtctgg ggcgaggagg accggctcat cccgtcgcag caggcggaga cctggcggcg
     3121 cttcattccc aaggccgata tcaagatctt caagggcgcc ggccacctcg tgctcgacga
     3181 gaagcgcgag gcgagcgacg ccgtccagaa ttttctcgcg tgaccgacag cacgccggcg
     3241 tgctgtcaac ctggatgagc gggctgagcg agacgcgcgc tcgctattgc gcgaaatatc
     3301 ggacctgcgt ggtatcttgc cgtggcaccg gcgcgatccg gcgcattctc taggagaggt
     3361 cgacccatgg cgacgacacg tccgttgtcc gaacttctgc ccaaggaaat gacggagctg
     3421 cgcgcgcagc cgttgttttc tctgctgctc gaggtgcagc cgccgattgt cgtcggcaag
     3481 acgcctgccc tcgaccggcg catcggcatc atcagcggcg gccgtttcga gggcgaacgc
     3541 ttgcgcggga cgctgcttcc cggcggcagc gactggcaga ccgtgcgcgg tggcgacggc
     3601 gcctggctga tcaacgtgcg catcgttctc aagaccgacg acgatgccat catcggcatg
     3661 ccctataccg gcatccgcca cgggccaaag gaagtgctcg accgcatcgc ccggggcgag
     3721 gtggtcaagg ccacggacta ctatttccgc atcgtcgcct cgttcgagac ctcgtcggag
     3781 aagtacggct ggctcaacaa catcgtcagc atcggcgtcg gccaccggtt gcccgagggg
     3841 ccgatctatc agatgttcga ggtgctctag ctgtgggcga gagcccgcag gcgcacagcg
     3901 aaatgcggga atgatcggaa ggcctggacg ctggtcccgg atttcgcttt gctcatccgg
     3961 gctgcgaggt atcgctgcgc cgacggaacg cggcttgcgc ctcttctccc cctgcagccg
     4021 ggcggtgaaa gcgggtctgc tgactcgcgg gaacgatcga agtagacaat agcatcgacg
     4081 aaggggaggg ggcatcatgt ccggctgggc gcaaaacttc gatctcaccg acggcgtcaa
     4141 cgtcctgcgc ctgatttgcg ggctgttctt catcccgcac attgtcggca agttcaccga
     4201 accggcgacg ctgaacttct tcaaggccgc caagttcaat ccgccggcca cctggatgta
     4261 catagccggc gcgatcgaga cggtgctgac catttgcctg gtgtttgcga tctacacgcc
     4321 ctttgtcgcc atcatcgccg ccttccatct gttcgtcgcc ggggccgcga cctacaaggt
     4381 gaccaaaaag tggatctggg tgatcggcgg catcgagtat tgcgtgttct ggatgttgtg
     4441 ctgcatcgtc
//
LOCUS       DATMQB010000175         4418 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_985881, whole genome shotgun sequence.
ACCESSION   DATMQB010000175 DATMQB010000000
VERSION     DATMQB010000175.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4418
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_985881"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..658
                     /locus_tag="VNY79_05350"
     CDS             <1..658
                     /locus_tag="VNY79_05350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015596683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NAD(P)-dependent alcohol dehydrogenase"
                     /protein_id="HWX71905.1"
                     /translation="VLEEEGVVPIPAHLSIEEAAALPCAAVTAWNAMMHHARLIAGQS
                     VLLQGTGGVSIFGMQLAHAMGVTAIITSSSDEKLERAKSFGAACGINYKSTPEWDKAA
                     VEFTGGSGVDHVVEVGGAETLTRSFGAIRLGGKISLIGGLSGGATELNPGLIFSKRAN
                     VQGIYVGSTQMFEAMNAAIIANRLKPVIDRVFGFDEVPAALRHMEAGAHFGKIVIRVA
                     "
     gene            complement(793..3942)
                     /locus_tag="VNY79_05355"
     CDS             complement(793..3942)
                     /locus_tag="VNY79_05355"
                     /inference="COORDINATES: protein motif:HMM:NF012789.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HWX71906.1"
                     /translation="MRFHADLHVHSKYSRATSRDLDLEHLAEWAARKGLAVIATGDFT
                     HPAWRAEHKGKLVPAEPGLFRLRPEIEQAVAERLPPACRTPVRFMLEVEISTIYKKAG
                     KTRKVHHLIYAPDFATAESISERLARIGNIASDGRPILGLDSRDLLEITLTSSPDAYL
                     IPAHIWTPWFAALGSQSGFDSIAACYGDLADQIFAVETGLSSDPPMNWRLSMLDRYRL
                     VSNSDAHSPGKLGREATTFDCALDYFALRKALETGQGFVGTVEFFPEEGKYHLDGHRK
                     CGVKFSPRETLAQGGRCPVCGGAMTVGVLSRVETLADRSEAEAAPPATAGAVSNLVAL
                     PEMLGEIASSGPSSKTVERGYGRLLSALGPELDILQAVPLEDISRADSSVLAEAVARL
                     RAGKVIRDAGYDGEYGVIRLFEPDELRHRTAGGMLFESPAAVPVPVVREGAQAKYHPS
                     KPPQDLPTPIPNPSPQRGGDTHAAPGSGVLSALDPDQRAAAAVVEGPLLIVAGPGSGK
                     TRTLVHRIAHLVADCGVAGAQCLAITFTRRAAAEMRDRLHAMLGPDAGGIAVHTFHSL
                     GLAILREHAAAAGLTSGFRVAGEAERAAALAAALGLPRPRAENLIRAISKAERGEAQP
                     NGEIAAARTAYRAMLAADHWIDFDDLVSLAVRLLADNAEIAALYRARFRFVCVDEFQD
                     VDARQYRLLTLLAPPAAGNLCVIGDPHQAIYGFRGADAACFERFGSDYPGGATIALRR
                     NYRSGGAIVAASSQVIAAHADEPIAEIVRERRERITIHAAPSERAEAEFVVITIEQAI
                     GGSSFFAIDSSRTGGREAALSFTDFAVLYRTDAQAAVLCEALARSGIPFRRHSHAALA
                     QEPSVRAVLEAYAAMAPADIDLPTRLRQSAARAAADTGEAAAAERALELLLPLAESCG
                     GDPARFLDAVALASGADFWDERAEGVALLTLHAAKGLEFACVFIVGLEDGVLPLHWGK
                     AEDAAPEELAEERRLFYVGMTRAKDRLVLSRALKRLWRGRVHTQRPSPFLGDIESELL
                     KEQRAELRRRREDRQLKLL"
     gene            complement(4070..>4418)
                     /locus_tag="VNY79_05360"
     CDS             complement(4070..>4418)
                     /locus_tag="VNY79_05360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HWX71907.1"
                     /translation="DERSLRQIVLNLLANSIKFTGPGGQVIVSTACADSGETVLRVRD
                     TGVGMSAKDVEAALEPFRQTATSGSWGSGGTGLGLPLTRALAEANGAHFNIKSAPNAG
                     TLVEIAFPRVTAH"
BASE COUNT          708 a         1476 c         1555 g          679 t
ORIGIN      
        1 ggtgctggag gaggaaggcg tcgtcccgat ccccgcgcat ttgtcgatcg aggaagcagc
       61 ggcgcttcct tgcgccgcgg tcacggcgtg gaacgcgatg atgcatcacg ccaggctgat
      121 cgctggccag agcgtgctgc tgcagggcac cgggggcgtg tcgatcttcg gcatgcaact
      181 cgcgcacgca atgggcgtga ccgcaatcat cacctcgtcg agcgacgaga agcttgagcg
      241 cgcgaagtcg ttcggcgccg cctgcggcat caactacaag agcacgccgg aatgggacaa
      301 ggcggcggtc gaattcaccg gcggcagtgg cgtcgatcac gtcgtcgagg tcggcggggc
      361 ggagaccctc acccgttcat tcggcgccat ccgcctcggc ggcaaaatct ccctgatcgg
      421 cggcttgagc ggcggcgcga ccgagctcaa tccgggcttg atcttctcca agcgcgccaa
      481 cgtccagggc atctatgtcg gctcgacgca gatgttcgag gcgatgaacg ccgccatcat
      541 cgccaacagg ctcaagcccg taatcgaccg ggtgttcggt ttcgacgagg tgccggcggc
      601 cttgcggcac atggaagcgg gcgcgcattt cggcaagatc gtcatccgcg tcgcgtgaac
      661 ggcgcgccat gcgccgtcat tgcgaggcac gaaagtgccg aagcaatcca ggccccaccg
      721 cgcggttgga ttgcttcctc gccctttggg ctcctcgcaa tgacgtttct gtatcgacca
      781 aacaatcaag ggctacagca gcttgagctg gcgatcctcg cgccggcgcc ggagctcggc
      841 ccgctgctcc ttgagcagct cgctttcgat gtcgccgagg aacggcgaag gcctttgcgt
      901 gtgcacgcgg ccgcgccaca gccgcttgag cgcgcggctc agcaccaggc gatccttcgc
      961 gcgagtcatg ccgacataga acagccggcg ctcctcggcc aactcctccg gcgccgcatc
     1021 ctcggccttg ccccagtgca gcggcagcac gccgtcctcc aggccgacga tgaagacgca
     1081 ggcgaattcc agtcccttgg cggcatgcaa ggtcaacagc gccacgccct cggcgcgctc
     1141 gtcccagaaa tcggcgccgc tcgcgagtgc gaccgcatcg agaaagcgcg ccggatcgcc
     1201 gccgcagctt tcggcgagcg gcagcagaag ctcaagcgcg cgttcggccg ctgccgcctc
     1261 gcccgtgtcg gcggcggcgc gcgccgcgct ctgccgcagt cgtgtcggaa gatcgatgtc
     1321 ggccggggcc atcgccgcat atgcttcgag cacggcgcgg accgatggct cctgcgccag
     1381 cgcggcgtgc gaatgcctgc ggaacggaat cccggaacgc gcgagcgctt cgcacagaac
     1441 ggcggcctgc gcgtcggtgc ggtagaggac ggcgaaatcg gtgaaggaga gcgccgcttc
     1501 ccgcccaccg gtgcggctgc tgtcgatcgc gaagaagctt gagccgccga tcgcctgctc
     1561 gatcgtgatg acgacgaact cggcctcggc ccgctcgctg ggcgccgcgt ggatggtgat
     1621 gcgctcgcgc cgctcgcgca cgatttccgc gatcggctcg tccgcatgcg cggcgatgac
     1681 ctgcgaggaa gcggcgacga tggcgccgcc cgagcggtag ttgcgcctga gcgcgatcgt
     1741 cgctccgccc gggtagtcgc tgccgaagcg ctcgaagcag gcggcatcgg cgccgcggaa
     1801 accgtagatc gcctgatgcg gatcgccgat gacgcagaga ttgccggcgg ccggcggcgc
     1861 caacagcgtg agcagccgat attgccgcgc atcgacgtcc tggaattcat cgacgcagac
     1921 aaagcggaac cgggcgcgat agagcgccgc aatctcggca ttgtccgcga ggagccgcac
     1981 cgccaagctg accagatcgt cgaaatcgat ccagtggtcg gccgccagca tggcgcgata
     2041 ggcggtccgc gccgccgcga tttccccgtt cggctgcgcc tcgccgcgct ccgccttgga
     2101 gatggcgcgg atgagatttt ccgcgcgcgg gcgcggcagg ccgagcgccg cagcgagcgc
     2161 ggccgcgcgc tccgcctcgc cggcgacgcg gaagccggat gtgagaccgg cggcggcggc
     2221 gtgctcgcgc aggatcgcga gcccgagcga gtggaaggtg tggacagcga tgccgcccgc
     2281 gtccgggccg agcatcgcat gcaggcggtc gcgcatttcc gccgcggccc ggcgtgtgaa
     2341 ggtaatggcc aggcattgcg cgccggcgac gccgcaatcg gcgacgagat gcgcgatgcg
     2401 atggaccaag gtgcgggtct tgcccgagcc cggcccggcg acgatcagca gcggaccttc
     2461 gaccacggcc gccgccgcgc gctgatcggg gtcgagggcc gagaggacgc ctgagcctgg
     2521 cgctgcgtgc gtgtcgcctc ccctttgtgg ggaggggttg gggatggggg tcgggaggtc
     2581 ctgcggaggc ttcgacgggt ggtactttgc ttgcgcaccc tcccgcacaa cgggcacggg
     2641 aaccgcagcc ggcgactcga acaacatgcc gcccgccgtt cggtgccgca gctcgtccgg
     2701 ctcgaacaac cggatgacgc cgtattcgcc gtcatagccg gcgtcgcgga tgaccttgcc
     2761 ggcgcgcagc cgcgccacgg cttcggcaag cacggaagaa tccgcccgcg aaatatcctc
     2821 gagcgggacg gcctgcagaa tgtcgagctc ggggccgagg gctgacagca gccggccgta
     2881 gccgcgctcg acggtcttgc tcgaaggtcc gctacttgcg atctcgccaa gcatttccgg
     2941 taaggcaacg aggttcgaca cggcgccggc tgtcgccggc ggtgccgcct cggcctcgct
     3001 gcggtcggcg agcgtctcga cgcggctgag gacgccgacg gtcatggcgc cgccgcacac
     3061 cgggcagcgc ccgccctggg ccagcgtttc gcgcggggaa aacttcacgc cgcatttgcg
     3121 gtggccgtcg aggtgatact tgccctcctc gggaaagaat tcgacggtgc cgacaaaacc
     3181 ttgcccggtc tccagcgctt tgcgcagggc gaagtagtcg agcgcgcaat cgaacgtcgt
     3241 cgcttcgcgg ccgagctttc ccggtgagtg cgcgtcggag ttggagacca accggtagcg
     3301 gtcgagcatc gacagccgcc agttcatcgg cgggtcggat gagagcccgg tctccacggc
     3361 aaagatttga tcggccagat cgccgtagca tgcggcgatc gaatcaaagc cggactgcga
     3421 gccgagcgcg gcgaaccacg gcgtccagat atgcgccggg atgagatagg cgtcgggact
     3481 ggacgtcagc gtgatctcga gaaggtcgcg cgagtcgagc ccgaggatcg ggcggccgtc
     3541 ggaagcgatg ttgccgatgc gcgccaggcg ctcggaaatg ctctcggcgg tcgcgaagtc
     3601 cggcgcgtag atgagatggt gcaccttccg tgtcttcccg gccttcttgt agatcgtgga
     3661 aatttccacc tcgagcatga agcgcaccgg cgtccggcac gccggcggca gtctctcggc
     3721 gaccgcttgc tcgatctcgg gtcgcagacg aaacaggccc ggctcggccg gcaccagttt
     3781 ccccttgtgc tcggcgcgcc acgccggatg ggtgaagtcg ccggtcgcga tgacagcgag
     3841 gcccttgcgc gccgcccact ccgcgagatg ttcgaggtcg agatcgcggc tggtcgcgcg
     3901 cgaatatttc gagtggacgt gcaggtcggc gtgaaagcgc atggcggctc cgcgcgctcc
     3961 ccgtctgcgg gaagcgaagg aaagctacgc gtgcacctga ttcggcggaa aacggcctgt
     4021 ggatgagcgt tcccgatgcg cgctgcggcc gggtcggcga acgcctagac taatgcgcgg
     4081 tcacccgcgg gaatgcgatc tcgaccagcg tgccggcatt gggcgcgctc ttgatgttga
     4141 aatgcgcgcc gttggcttcg gcgagcgccc tggtcaaggg caggccgagc ccggtcccgc
     4201 ccgagcccca gctcccggac gtcgccgtct gccggaacgg ctccagtgcc gcctcgacat
     4261 ccttcgcgct catgccaacg ccggtgtcgc gcacgcgcag cacggtctcg ccgctgtcgg
     4321 cgcacgccgt cgatacgatc acctggccgc cgggaccggt gaacttgatc gagttggcga
     4381 ggaggttgag cacgatctgg cgcagcgagc gctcgtcg
//
LOCUS       DATMQB010000176         4150 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_363847, whole genome shotgun sequence.
ACCESSION   DATMQB010000176 DATMQB010000000
VERSION     DATMQB010000176.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4150)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4150)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4150
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_363847"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            322..2166
                     /locus_tag="VNY79_05365"
     CDS             322..2166
                     /locus_tag="VNY79_05365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0051139 - metal cation:proton antiporter
                     activity [Evidence IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monovalent cation:proton antiporter-2 (CPA2)
                     family protein"
                     /protein_id="HWX71908.1"
                     /translation="MDTHSTDLGFLSFALVLLGACVVSVPIARRLRLSPVLAYLIAGA
                     IIGPWGIGVIRAPSIMLGVAELGIVLMMFVIGLELEFSRLVAMRRDIFGLGAAQLVLT
                     AAVIGALAVAFGLTTWRGAAIAGLALALSATAIALEILEERGDLHLVYGQRAFAIMLF
                     QDMAVVPLIALLPLLAPGGTGPGDAVSAATAVALAAGAIAAVVVAGRYLLNPLFRLLS
                     ETGAREVMTAAALLVVLGVALLMLAVGMSMALGAFLAGVMLAESNYRHELEADIEPFR
                     GLLLALFFISVGMTIDLDVVRAHPWLILAAAVAITAIKAAIVWGLFGMTCVRRGDALR
                     AGSILTGAGEFAFVLFPLGASLGVLSSEQRSVLTAIAAVTMLFGPPVAALADLGLRRF
                     ARGTTPEPEQIDGVTGSVLVIGFGRFGQIAAQCLLAEGVDVTAIDVSAGMIQNASRFG
                     FKVYYGDGTRLDVLRAAGAGNARVIAVCLDDKRAATRIVEMARAEFPGVKLFVRSYDR
                     VHTLELIAKGVDYEVRETYESALAFGRHTLEEMGLDPERAAEIEAEVRRRDIDRLALQ
                     QAGDIYAGAELMPYHTLPHEPFSEPKRRAVPLNEEAGDIISHETEFSG"
     gene            complement(2260..2538)
                     /locus_tag="VNY79_05370"
     CDS             complement(2260..2538)
                     /locus_tag="VNY79_05370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71909.1"
                     /translation="MKWLLILCIAALAAAALLPEDADARRSVRRPRVVITAPRPSYYD
                     TEPGAIYGYAPGNYVPGPNGMLYGPYPIRPPVVSFGPYGPDFYVWRNW"
     gene            complement(2674..4095)
                     /locus_tag="VNY79_05375"
     CDS             complement(2674..4095)
                     /locus_tag="VNY79_05375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_196249245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004803 - transposase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IS1182 family transposase"
                     /protein_id="HWX71910.1"
                     /translation="MTHITGQSRYQSTLFPQSLDEVMPQDHPVRVIDAFVDALDLGAM
                     GFAKVVAEATGRPPYMPGDLLKLYVYGYFNWVRSSRRLEREAQRNVEVQWLINRVTPA
                     FKTIADFRKDHAKAIVAVCRAFTRFCREQALFGAELLAIDGTKIGAVASRKKVMTPKR
                     IAKMTAAIDRRIAEYLAAMDEADRQETPPITGDVTAALERLAAERRKLQDEAQAMARE
                     GLKQRVDGEPEAKLMRSPHGHQVAYNAQIAVDAKHKLIAASELTNDSNDHQQLHPMAL
                     QGKEAVGATEVTAVADPGYSNGEHGARCEQDGITAVVPRAETVNTTGQQYFSRNEFTY
                     DPNTDTWRCPANETLSLHTIWHTQKKKVYTSAACSACPLKPRCTKAKRRLIIRDFHED
                     AREAMHRRAIGDPVWMKLRRELAEHPFGTMKCLMGHPRFLVRGLTKARAEFALGVLSY
                     NLKRAITILGVPGLLMALRPRPA"
BASE COUNT          640 a         1427 c         1333 g          750 t
ORIGIN      
        1 atcgacctgc acatgtcgat cagcgcgctg tgcttcttca acgtcgccaa ccgcgcgacc
       61 ttctcgcgca tcttccagcg cgacatggcg agcccgcagg cgctcgcgcg ccggcgcgaa
      121 atcgtgatcg acaccatcct gcgctacgtg aagcagacgc cgacgtagcc ttgccgctgg
      181 cacccggtca gataggctct ctggcctata ttccgccgtc atgcccggcc ttgtgccggg
      241 catccacgtc tttcttttag caaacaagac gtggatggcc gggacaagcc cggccatgac
      301 gggcgccgca aggaaaacgc catggacacg cactccaccg atctcggttt cctctcgttc
      361 gcgctggtgc tgcttggcgc ctgcgtggtg agcgtgccga tcgcgcgccg cctgcggctc
      421 tcgccggtcc tcgcctacct gatcgccggc gcgatcatcg ggccgtgggg catcggcgtc
      481 atccgcgcgc cgtcgatcat gctgggggtg gcggaactcg gcatcgtgct gatgatgttc
      541 gtgatcggcc tcgagctgga gttctcgcgc ctggtcgcca tgcggcgcga cattttcggc
      601 ctcggcgcgg cgcagctcgt gctcaccgcg gcggtgatcg gcgcgctggc ggtggcgttc
      661 gggctcacga cctggcgcgg cgccgcgatc gccggcctcg cgctcgcgct ctccgccacc
      721 gcgatcgcgc tggaaatcct cgaggagcgc ggcgacctgc acctcgtcta cggccagcgc
      781 gccttcgcca tcatgctgtt ccaggacatg gccgtggtgc cgctgatcgc gctcctgccg
      841 ctgctcgcgc cgggcggcac cggccccggc gatgcggtct cggcggccac cgcggtcgcg
      901 ctcgccgccg gcgccatcgc ggccgtggtg gtggctgggc gctatctgct caacccgctg
      961 ttccggctgc tctcggagac cggcgcgcgc gaggtgatga cggcggcggc gctcctcgtg
     1021 gtgctggggg tggcgctttt gatgctggcg gtcggcatgt cgatggcgct cggcgcgttc
     1081 cttgccgggg tgatgctcgc ggaatcgaac taccggcacg aactcgaagc cgacatcgag
     1141 ccgttccgcg gtttgctgct cgccctcttc ttcataagcg tcggcatgac catcgacctc
     1201 gacgtggtgc gggcgcatcc gtggctgatc ctcgccgcgg ccgtggcgat caccgcgatc
     1261 aaggcggcga tcgtgtgggg cctgttcggc atgacctgcg tacggcgcgg cgacgcgctg
     1321 cgcgccggct cgattctcac cggcgcgggc gagttcgcct ttgtgctgtt cccgctgggc
     1381 gcgagcctcg gcgtgctctc gagcgaacag cgcagcgtgc tcaccgcgat cgcggcggtg
     1441 accatgctgt tcgggccgcc ggtcgccgcg ctcgccgacc tcgggctgcg ccgcttcgcg
     1501 cgcgggacga cgccagagcc cgagcagatc gacggggtca ccggctcggt gctggtgatc
     1561 ggcttcggcc gcttcggcca gatcgccgcg caatgcctcc tggccgaggg ggtcgacgtg
     1621 acggcgatcg acgtgagcgc cggcatgatc cagaacgcga gccggttcgg cttcaaggtc
     1681 tattacggcg acggcacccg gctcgacgtg ctgcgcgcgg cgggcgccgg caatgcgcgc
     1741 gtgatcgccg tgtgcctcga cgacaagcgc gcggcaaccc gcatcgtcga aatggcgcgc
     1801 gccgagtttc ccggggtcaa gctgttcgtg cgctcctacg accgcgtgca cacgctcgag
     1861 ctgatcgcca agggcgtcga ctacgaggtg cgcgagactt acgaatccgc cctcgcgttc
     1921 ggccgccaca cgctggaaga aatggggctc gaccccgagc gcgccgcaga aatcgaagcg
     1981 gaggtgcgcc ggcgcgacat cgaccgcctc gcgctgcagc aggcgggcga catctacgcg
     2041 ggcgccgagc tgatgcccta tcacacgctg ccgcacgagc cgttctccga gcccaagcgc
     2101 agggcggtgc cgctcaacga ggaagccggc gacatcatca gccacgaaac ggagttttcc
     2161 gggtagttcc gtagggtggg caaagcggcc gcaggccgcg tgcccacgcg gaacaaacaa
     2221 agacgcgtgg gcacggccgc tgcgcggcct ttgcccaccc taccaattcc gccaaacata
     2281 aaaatcgggg ccgtaggggc cgaagctgac caccggcggg cggatcggat aaggcccgta
     2341 cagcatgccg ttcggtcccg gcacgtagtt gccgggcgcg tagccgtaga tcgcgccggg
     2401 ctcggtgtcg tagtagctcg gccgcggcgc cgtgatcacc acgcgcggcc ggcgcacgct
     2461 cctgcgcgca tcggcgtcct cgggcagcaa cgctgccgcg gccagcgcgg cgatgcaaag
     2521 aatcagaagc catttcatcg taacctcctc catttgttat atctgcgtac tttctctgat
     2581 tcgtcatgcc ccgcgaaaca ggccgtgtca aaactcggcc gaatgatgct catgataccg
     2641 gctgccgtcg agcaaatgcg cgcacccgct ttctcaagct ggacggggac gcagggccat
     2701 cagcaagcca ggtaccccga ggatcgtgat cgcccgcttg aggttgtaac taagaacccc
     2761 caaggcaaat tcggcccttg ccttggtcaa tccgcgcacg aggaagcgcg gatggcccat
     2821 caagcacttc atggtcccga acgggtgctc ggccaactca cggcgaagct tcatccacac
     2881 cgggtcgccg atcgcgcgac gatgcatcgc ttcgcgagca tcctcatgga agtcgcggat
     2941 gatgagccgg cgcttcgctt tcgtgcaccg aggcttgagg ggacaggcgc tacaagctgc
     3001 gctcgtgtag acctttttct tctgggtgtg ccagatcgta tgcaagctca gcgtctcgtt
     3061 ggccgggcag cgccaggtat cggtgttcgg atcgtaggtg aactcgttgc ggctgaagta
     3121 ttgctgcccg gtcgtattga cggtctcggc gcgcggcacg accgccgtga tcccgtcctg
     3181 ctcgcagcgc gcaccatgct caccgttcga atagccggga tcggcgaccg cggtcacctc
     3241 ggtcgcgccc accgcctctt taccctgcag cgccatcgga tggagctgct ggtggtcgtt
     3301 gctgtcgttg gtcagttcgc tcgcggcgat cagtttgtgt ttggcatcga ccgcgatctg
     3361 cgcgttataa gccacctgat gcccatgcgg cgagcgcatg agcttggcct cgggctcccc
     3421 gtcgacccgc tgcttgagcc cctctcgtgc catggcctgc gcctcgtcct gcagcttgcg
     3481 ccgttccgcc gccagccgct ccagagccgc agtcacatcg ccggtaatcg gcggcgtctc
     3541 ctgccggtcc gcttcgtcca tggccgcgag atactcggca atccgccggt cgatcgcagc
     3601 cgtcatcttc gcaatccgct tcggcgtcat cacctttttg cggctcgcca ccgccccgat
     3661 cttggttccg tcgatcgcca gcaactcggc cccgaacagc gcctgctccc ggcagaaccg
     3721 cgtgaacgcc cggcatacgg ctacgatcgc tttcgcatgg tccttgcgga agtcggcaat
     3781 cgtcttgaat gccggcgtca cccggttgat cagccactga acttcgacat tgcgctgcgc
     3841 ttcccgctcc aatcggcggc tcgagcggac ccaattgaag tagccataga catagagctt
     3901 cagcagatcc ccaggcatat agggcggccg gccggtggcc tccgctacca ccttggcaaa
     3961 gcccatcgca cccaagtcca gtgcatcgac aaacgcatcg atcactcgca cgggatgatc
     4021 ctgcggcatc acctcatcca gggactgcgg gaacaacgtc gactgataac gagattgtcc
     4081 ggtaatatgc gtcatcgcgg tgcccagaat cagaaggttg catcgccatc cgtcgaatca
     4141 aaaaaccgtc
//
LOCUS       DATMQB010000177         6343 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_986709, whole genome shotgun sequence.
ACCESSION   DATMQB010000177 DATMQB010000000
VERSION     DATMQB010000177.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6343
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_986709"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..128)
                     /locus_tag="VNY79_05380"
     CDS             complement(<1..128)
                     /locus_tag="VNY79_05380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007592364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Z"
                     /protein_id="HWX71911.1"
                     /translation="MLDLVFLGTAAAVPSAERGLPALLVARGPSRFLIDCGEGTQR"
     gene            complement(320..1138)
                     /locus_tag="VNY79_05385"
     CDS             complement(320..1138)
                     /locus_tag="VNY79_05385"
                     /inference="COORDINATES: protein motif:HMM:NF014724.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HWX71912.1"
                     /translation="MTFLFGKAVWAVVQPGNLLLLCLLAGVIFFLASRGRRGGIVVGL
                     SALGFLLLAVAPIGPAMLLALERRLPRPAVLPDKIAGILVLGGAVEPALSLSYGETVF
                     NSAVARVLAGIALARRYPEAKLALIGGEGGFVPVGLAESRATLGLVIEQGIAPERVIL
                     EERSRSTHENAVYAKELIRPAPGATWILITSAYHMPRSIASFDGVGWPVIPYPVDYRI
                     DPQTGLRANFSLLDGLGASTLAGKEWAGLLGYRLMGWTREVFPAAAEIKARSAR"
     gene            1227..2720
                     /locus_tag="VNY79_05390"
     CDS             1227..2720
                     /locus_tag="VNY79_05390"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018262380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018478 - malonate-semialdehyde
                     dehydrogenase (acetylating) activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HWX71913.1"
                     /translation="MSDIHHYIEGKHAEGTSGRWGDVYNPATGERGRRVAFASAGEVD
                     RAVKAAAAAFPAWAATPPLTRARILFKFRELLDREAGALARLITDEHGKVLSDAAGEV
                     TRGTEVVEFACGIPHLLKGEFTEQVGRGIDSWSLRQPLGVCAGITPFNFPAMVPMWMF
                     PVALACGNTFVLKPSERDPSPGFRIAELLTEAGLPPGVFNVVNGDKQAVDALLHHPDV
                     DAVSFVGSTPIAHYIYRTAAESGKRVQALGGAKNHMVVMPDADLDQATDALMGAAYGS
                     AGERCMAVSVAVAVGNAGDRLMDKLVPRVRALKVGPGADPEAEMGPLVTGQHLAKVRS
                     YVDLGVEEGAKLVVDGRGLKLQGYENGFFLGGCLFDEVKPEMRIYKEEIFGPVLSVVR
                     TPDFDSATKLVNDHEYGNGVAIFTRDGDAAREFSNRIQIGMVGVNVPIPVPMAFHSFG
                     GWKRSLFGDMAVHGMEGVRFYTRLKTVTARWPAGIRAGAEYVMPTMR"
     gene            3389..4966
                     /locus_tag="VNY79_05395"
     CDS             3389..4966
                     /locus_tag="VNY79_05395"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HWX71914.1"
                     /translation="MKPETEVLIVGAGPTGLVLALWLSHLGVKVHIVDKAAEPGTTSR
                     ALAVHARILEFYDQIDLAREIVVRGPKMEAATLWVAGKEKGRIVFGDMGKGISPFPYA
                     LIFPQDEHERLLIDRLGELGVAVERSTELVGFEDLGARVAARLRRADGSEQAVEAVFI
                     AGCDGAHSIVREALKVGFPGGTYSHIFYVADVEASGRAMNGELNGALDEAEFLAIFPL
                     KGAGRARFIGTVKREAEARHDLTFDDVSPRLINRLDIKVARANWFSTYRVHHRVAGHF
                     REGRAFLLGDAAHIHSPVGGQGMNTGIGDAINLAWKLAAVLQGRADPSLLDSYEPERI
                     AFARRLVATTDRAFQFINKDGAIARFVRVRLVPLLMPALFSFRAARRLMFLTLSQTNV
                     NYRDMALAAGSAGRVHAGDRLPWVCQEDGTDNFASLRSLDWQAHVYGDTSIEIEQACA
                     QAGLNLRRFPWSDAAGKTGVARNAFYLVRPDGYVGLAAVSNVADALRAYLTRFGLVFA
                     KASRSPLEADAAHSGPR"
     gene            4963..5688
                     /locus_tag="VNY79_05400"
     CDS             4963..5688
                     /locus_tag="VNY79_05400"
                     /inference="COORDINATES: protein motif:HMM:NF025605.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HWX71915.1"
                     /translation="MSGDAPARPATAPRPQPSRAEKSAARRAAILKAALDEFCEKGFA
                     ATRVEDVAARARVAKGTIYLNFKDKQALFEELIRSTLGAHIARLEAVRIENGQRMRDT
                     IEAIGLPMIEAARTGRLGELMRLMIAESGRFPHLAEFYYHEVLARAMSAIRRLAREAV
                     REGELAGEQLERFPQIIGAPVVVTLLWTTLFDKFAPLDSRGLLQAYLDLVFRQDAPKD
                     KHPKGTRSGSRRIESRPSTVRNS"
     gene            5844..6332
                     /locus_tag="VNY79_05405"
     CDS             5844..6332
                     /locus_tag="VNY79_05405"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HWX71916.1"
                     /translation="MPSRNGSRTYGTVSADRQKEMSGLEFVQGLANGTLPLNTIAQTL
                     GYDLIEAENGRVVVTAVPRETHLNPAGTVHGGLAATMLDSCMGLAVQSTLDKGVGSTT
                     LEFKISFLRPITPQTGAIKAEGVVISRGRRVGTAEGRVTDSKGRLLVHGTTTCLIFEN
                     QS"
BASE COUNT         1156 a         2039 c         2045 g         1103 t
ORIGIN      
        1 tggcgctggg tgccttcgcc gcaatcgatc agaaaccggc tcgggcccct ggcgacgagc
       61 agtgccggca agccgcgttc ggcggaaggc accgctgcgg cagtgccgag aaagacgaga
      121 tcgagcaagg ggaccctgcc aaattctgcg caattagcaa tcgaagctaa cccaacaccg
      181 tccaagccgg ggaggagatg ctctgccaac acatataacc agttgtagtg cgtctcgggg
      241 ctccgggggg atgcgatgta ccggtttgtg tattggagtg gggtcacctt gctcgtagtg
      301 tggagcgtat tctccgccgt cagcgcgctg aacgggcttt gatctcggcc gctgcgggaa
      361 acacctctcg cgtccatccc atcagccgat agcccaaaag gccggcccac tccttcccgg
      421 ccagggtgct ggcgccgagc ccgtcgagca ggctgaaatt cgcgcgcaga ccggtctggg
      481 gatcgatcct gtaatcgacg ggataaggga tcaccggcca acccacccca tcgaacgagg
      541 cgatcgaccg gggcatgtga tacgccgagg taattaagat ccaggtcgcg ccgggcgccg
      601 gccgaatcag ctctttggcg tagaccgcgt tttcatgggt actgcgcgag cgctcttcca
      661 ggatgacgcg ctcgggagcg atgccttgct cgatcacaag gccgagggtg gcccgtgact
      721 cggccaaccc gaccgggacg aacccgcctt ccccgccgat cagcgcgagc tttgcttcgg
      781 ggtatcgccg cgccaaggct atcccggcga gcacgcgggc cacagcgcta ttgaacacgg
      841 tctcgccata ggagagcgac agcgccggct cgacggcgcc cccgagcacg aggatacctg
      901 cgatcttatc cggcagcacg gccgggcgcg gcagccgccg ttccaaggcc agcagcatcg
      961 ccggcccgat cggcgcgacg gcgagcaaca gaaaccccag cgcggacagg ccgaccacaa
     1021 tcccgcctcg ccggccgcgc gaggccagga agaagatgac gccggccaga aggcaaagca
     1081 gcagcagatt gccgggctgc accaccgccc aaacggcctt gccgaaaagg aaagtcactg
     1141 gtcagccaac gaaaatccgc tgccgcggag acggctgcgg gcctatgatg ccggcctgag
     1201 acatatcgca gagcgggtgc atcggaatga gcgacatcca ccattatatc gaaggcaagc
     1261 acgccgaggg aacgagcggg cgctggggtg atgtctataa cccggcgacc ggcgagcggg
     1321 gtcgccgcgt cgctttcgcg agcgccggcg aggtcgaccg cgcagtcaag gctgccgccg
     1381 ccgcttttcc ggcctgggcg gcgacaccgc cgctgacccg cgcgcgcatt ctcttcaaat
     1441 tccgcgaatt gctcgaccgc gaggccggcg ccttggctcg cctcatcacc gatgagcacg
     1501 gcaaggtgct ctccgacgcc gccggcgagg tgacacgcgg caccgaggtc gtcgaattcg
     1561 cctgcggcat cccgcatctc ctcaaaggcg agttcaccga gcaggtcggc cgcggcatcg
     1621 acagctggtc gctgcgccag ccgctcggcg tctgcgccgg gatcactccg ttcaatttcc
     1681 cggcgatggt gccgatgtgg atgttcccgg tggcgctcgc ttgcggcaac acctttgtgc
     1741 tgaagccgtc ggagcgcgac ccctcgcccg gtttccgcat cgccgagttg ttgaccgagg
     1801 ccggcctgcc gcccggcgtc ttcaatgtcg tcaacggcga caagcaggcg gtcgacgcgc
     1861 tgctgcatca cccggatgtc gacgcggtca gctttgtcgg ctcgacgccg atcgcccatt
     1921 acatctaccg gaccgccgcc gagagcggca agcgcgtgca ggccctgggc ggcgccaaaa
     1981 accacatggt cgtgatgccg gacgccgacc tcgaccaggc aaccgatgcg ctgatgggcg
     2041 ccgcctacgg ctcggccggc gagcgctgca tggcggtgtc ggtcgccgtc gcggtcggca
     2101 acgccggcga ccgcctgatg gacaagctgg tgccgcgggt gcgcgcgctc aaagtcgggc
     2161 ccggcgccga cccggaggcc gagatgggcc cgctcgtcac cggccaacat ctcgccaagg
     2221 tgcgctctta cgtcgatctc ggcgtcgagg agggcgccaa gctcgtcgtc gacggccgcg
     2281 ggctcaaatt gcagggttac gagaacggct tcttcctcgg cggctgcctg ttcgacgagg
     2341 tcaagcccga gatgcgcatc tacaaggagg agatcttcgg gccggtattg tcggttgtgc
     2401 gcacccccga tttcgacagt gcgaccaagc tcgtcaacga ccacgaatac ggcaacggcg
     2461 tcgcgatctt cacccgcgac ggcgatgccg cgcgcgaatt ttcgaaccgc atccagatcg
     2521 gcatggtcgg cgtcaacgtg ccgatcccgg tgccgatggc ctttcacagc tttggcggct
     2581 ggaagcgctc cttgttcggc gatatggcgg tgcacggcat ggaaggcgtg cgcttctaca
     2641 cccgcctcaa aaccgtaacc gcccgctggc ccgccggcat ccgcgccggc gctgaatacg
     2701 tcatgccgac gatgcggtga aggtcctacc gacccgccgg ccggcggcaa cctgtcgttg
     2761 agcgcgccgc cctgatcgac ctgtttcatc aagagaagaa caggctggac tcccggaatg
     2821 agtgcagctt gctcagcatc cgcctcgcaa aaacttgcca gcctcattgt tacgttacgc
     2881 tgcacccgcc gttcggtttc gcctgcaaca tacggtgcga ttgtggcaat ttcagcggcg
     2941 ccgttccttg acgggtgcgg gcaattggcg ctcacccagg gaagtggttg cacttttccg
     3001 taaaggcgcg cggccaattg ccgtcgtgca ccacaacgaa tctcggaagc tgcgcgcgtt
     3061 cgctcttggc gacgctcgcc gcgcccgcgg tgcgaagctg gcgcacctgg gcctcaacga
     3121 cctagccgtc cgtcgatacc gcgcatatcc gtaaatcatg cggtctattc tgcaccggat
     3181 ttctgcacca aaaagcgcaa tcgcttcaat gctctaattt tggtgcgaaa tttcctaact
     3241 ttcgcaactg tgcggcacgc ccgagccctc acggggcagt cgggcaaccg agcgaccgtg
     3301 tcgctctgtg ctcttgtctc ccgagcaggt ggcgtattaa acttttgact gactggtcag
     3361 ccatttttcc tctgtccgcg aggcagccat gaaaccagag actgaagtct tgatcgtggg
     3421 ggcggggcca actggcctag tgttggcgct gtggctcagc catcttggcg tgaaggtgca
     3481 catcgtcgac aaggcggccg aaccgggcac cacctcgcga gccctggcgg ttcatgcgcg
     3541 catcctagaa ttttacgatc agattgatct cgcccgcgag atcgtcgttc gtgggcccaa
     3601 aatggaagca gccactctat gggttgcagg caaggaaaag gggcgcatcg tctttggcga
     3661 catggggaaa ggcatcagcc ccttccccta cgcgctcatc tttccgcaag acgagcatga
     3721 gcgcctcttg atcgatcgtc tcggggagct gggcgtcgcg gtcgagcgct ccacggaact
     3781 tgtcggcttc gaagacctgg gcgcgcgggt ggcggcgcgc ctgcggcggg ccgatgggtc
     3841 ggagcaggca gtagaggccg tcttcatcgc cggctgcgac ggcgctcatt cgatcgtgcg
     3901 cgaggcattg aaggtcggat ttccgggcgg cacctactcg catatcttct acgtcgcgga
     3961 tgtcgaggcg agcggccgcg cgatgaacgg cgagctgaat ggggcgctcg atgaagcgga
     4021 gttcttagcg atcttccctc taaagggcgc cgggcgagcg cggttcatcg gcactgtcaa
     4081 gcgcgaggcc gaggcgcgcc acgatctcac cttcgatgat gtcagtcctc gcctcatcaa
     4141 ccgcctagac atcaaggtcg cgcgcgcgaa ctggttctcg acctatcgcg tccatcacag
     4201 ggtggcggga catttccgcg aaggccgcgc cttccttctc ggcgatgccg ctcatatcca
     4261 cagtcccgtt ggcggccaag gcatgaatac cggcatcggg gatgccatca acctcgcttg
     4321 gaagctcgcc gcggtgctcc aggggcgcgc cgatccgagc cttctcgaca gctacgagcc
     4381 ggagcgcatc gccttcgcgc gccggctggt cgcaaccact gaccgggcct tccaattcat
     4441 caacaaagac ggtgccatcg cccgcttcgt acgcgtccgt ctcgtgccgc tgctgatgcc
     4501 ggcgctcttc agctttcgcg cggcgcggcg gctgatgttc ctgacgctct cgcagaccaa
     4561 tgtgaactat cgtgatatgg ctctggctgc cggttcggcc ggccgcgtcc atgctggaga
     4621 ccggctacct tgggtatgcc aggaagatgg gacagataat ttcgctagcc tgcgcagcct
     4681 cgactggcag gcgcacgtct atggtgacac gagcatcgag atcgaacagg cttgcgcgca
     4741 ggccgggctg aacttgcggc ggtttccctg gagcgatgcg gccggcaaga ccggcgtcgc
     4801 ccggaacgcc ttttatctcg tcagaccgga cggttatgtc ggtttggccg ctgtgagcaa
     4861 tgtcgccgac gcgcttcgcg cctacctgac gcgcttcggt ctcgtcttcg ccaaggcgag
     4921 ccgatcgccg ctggaagccg acgcggccca ttcgggtccg cgatgagcgg agacgctccg
     4981 gcgcggccgg caacggcgcc gcgcccccag ccgtcgcgcg ccgaaaagtc cgcagcgcgc
     5041 cgcgccgcga tcctcaaggc ggcgctcgac gagttctgcg agaagggttt tgcggcgacg
     5101 cgcgtcgagg acgtggcggc gcgagcgcgc gtcgccaagg gcacgatcta cctcaacttt
     5161 aaggacaagc aggctctatt cgaggagctg atccgctcga cgctcggcgc ccatatcgca
     5221 cggctcgaag cggtacgcat tgaaaacggg cagcgtatgc gcgatacaat cgaggctatc
     5281 ggcctgccga tgatcgaggc cgcccgtacg ggacggctgg gcgagcttat gcggctcatg
     5341 atcgctgaaa gcgggcgctt cccgcatctc gcggagttct attatcatga ggtgctggcg
     5401 cgagcgatga gcgccatccg gcgtctggcg cgtgaggccg tccgcgaggg cgaactagcg
     5461 ggcgaacagt tagagcgctt tccccaaatc atcggtgcgc cggtggtggt gacgcttctg
     5521 tggaccacac tcttcgacaa atttgcgccg ctcgacagcc gtggcctgtt gcaggcttat
     5581 ctcgatctcg tcttcagaca ggacgcccca aaggacaagc acccgaaagg gacgcgctct
     5641 ggttcgcgcc ggatcgagag ccgaccctcg acggtgcgaa attcttaacc gttgcacgcg
     5701 gcaactagat agaagagcta gaagagacgg gacgcactgc cccgcagcgc gcggcgttct
     5761 cgaatcaaaa agcaatccgc gggtagagcg agggacgaga accgaggcat ctcttcatcc
     5821 tcaattcctg ggacgatgaa gcgatgccga gccgtaacgg cagcaggaca tatgggactg
     5881 tcagcgccga caggcagaag gagatgagcg gcctggagtt tgtccaaggt ctggcgaacg
     5941 gaacattgcc gctcaacacg atagcccaga ccttgggata cgacctcatc gaggcggaga
     6001 acggacgtgt cgtcgttacc gccgtgccga gagagaccca tctgaatccc gccggcaccg
     6061 tgcatggcgg tctcgcggcg acaatgctcg atagttgcat gggcctcgcg gttcaatcga
     6121 cgctggacaa gggcgtcggc tccacgaccc ttgagtttaa aatttcattc ctccggccga
     6181 tcacgccgca gacaggcgcg atcaaggcgg aaggtgtggt gatcagccgg ggccgtcggg
     6241 ttggtactgc ggaggggcgg gtcacagaca gcaaggggcg cttgcttgtc cacggcacaa
     6301 ccacctgcct gatttttgaa aaccaatcgt gacgcagggc ccg
//
LOCUS       DATMQB010000178         6064 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3154578, whole genome shotgun sequence.
ACCESSION   DATMQB010000178 DATMQB010000000
VERSION     DATMQB010000178.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6064
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3154578"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..537)
                     /locus_tag="VNY79_05410"
     CDS             complement(<1..537)
                     /locus_tag="VNY79_05410"
                     /inference="COORDINATES: protein motif:HMM:NF015682.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HWX71917.1"
                     /translation="MWWMRWADWAASIAGSSRWSSPARSWSERRSLATPAPPTASRFS
                     ARCIAARQGDIVVAATDAFTHTAIAGDLLLGMARNRGVAGFVTDGSVRDLAGVLAVGL
                     PVYCAGLTANSAARNGPGTVGLPIVVGGVAVESGDILVGDRDGVVVVPLKQAQAVLAK
                     LADVRAAEVSLEAKVKAGL"
     gene            462..737
                     /locus_tag="VNY79_05415"
     CDS             462..737
                     /locus_tag="VNY79_05415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71918.1"
                     /translation="MTWLDWTSGLIRQSRQPNPPIASTTFPVGTPENPAISSSDGRGK
                     FRLIVSRGGSSIIVCYLACTHWVVIIAVSVQAAATRFTISAHGRRDS"
     gene            complement(785..1927)
                     /locus_tag="VNY79_05420"
     CDS             complement(785..1927)
                     /locus_tag="VNY79_05420"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013253.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-hydroxy acid oxidase"
                     /protein_id="HWX71919.1"
                     /translation="MAQRTLPRPVFDFADGGAENEYTLRRNEDAFAQFELLPQPLHGA
                     ADRELSVELFGRRLALPVMIGPTGLSGLFWPGGEIAAARAAAAAGTAFCLSHASTCTM
                     EELAASSAGPRWMQVFIYRDRGLTREFVERAAASGFDALVLTTDNQLVGNRERDIRNG
                     FTIPPRFSPLDVMAMAAKLPWLLRMGPRLSKINFANYTSPGAAADISAMAAKIASLLD
                     PSMSWRDVEWLRGMWKGPLLLKGILHPKEAAEAIARGIEGVIVSNHGGRQLDGAPAAL
                     DALPGVVAAVGGRIPVLIDGGIRRGADVVKALALGASLCLIARPHLFGLAVAGEAGVA
                     RVLDILRREVDRVMGLLGVRTIAEIGPDYLTRRAARHDEITASSRP"
     gene            2086..3006
                     /locus_tag="VNY79_05425"
     CDS             2086..3006
                     /locus_tag="VNY79_05425"
                     /inference="COORDINATES: protein motif:HMM:NF020039.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HWX71920.1"
                     /translation="MSNQSMGAAKPGAPELIAAGLGWPEGPTVMPDHSLVFVDTYRSQ
                     LTTIGPDRVPRRFAYTAGGPNSCVLGSDGALYVCQNGGTTGPWRAKEMVEPSIQRVHA
                     GGKAETLITHVEGIKLNGPNDLAFAPDGSLVFSDPGTYNLKNPDPSYIHKITPDGVAK
                     VVIAFPKPVFPNGVTVEADGSIVWDESYTGRVGRIRPNGKIEDLGRLPGDNPIPDGLK
                     VGADGRLYVTDILAKGVHVLAPDGEVDRFIPCGIAPTNCAFDGETLWLTDAGTLAVSA
                     EPSNEGRIWRLHIPGGGAPTYKGSIAVPKR"
     gene            3251..4645
                     /gene="chrA"
                     /locus_tag="VNY79_05430"
     CDS             3251..4645
                     /gene="chrA"
                     /locus_tag="VNY79_05430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009737340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015109 - chromate transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015703 - chromate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromate efflux transporter"
                     /protein_id="HWX71921.1"
                     /translation="MDAMVDTKSRQATGKALAARDALRDSFGVWTHVSVAGIGGPAKQ
                     IATMHRLAVEGKRWISEDGFFHALSYCIALPGPETQQLAIYVGWLANRTIGGIIAGGL
                     FILPGAICMMALSFGYVLGAESQAGQAIFVGVRPAILAIMAEAIVRFGRHVLHGPLML
                     AVAALAFLAAFFKLPLPLIIFVPALLGIAAAMARLPGFTRPAAATTDRAAGAHKREGL
                     ADHARPGIAQLARSLAIWLALWLAPAITLFAIFGMDNIYTQISLAFGKVALMAFGGDY
                     AVVVYGAKQAVDSYHWISTREVQEGIAMGEIVPGTIMIVTQFFGFVAAYRDPGNLPPL
                     LAGVFGGLLATWMTFIPCFLWILSIAPFIEGLRRKAILSNALQAVTAAAVGVIFNLTV
                     WFGIRTLFRVVQPVQYGQLNFDVPDFASFDPWALALFACAAIAVFRFQISAAMTLVAS
                     SAAGILLLWVGLAG"
     gene            4668..5072
                     /locus_tag="VNY79_05435"
     CDS             4668..5072
                     /locus_tag="VNY79_05435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4864 domain-containing protein"
                     /protein_id="HWX71922.1"
                     /translation="MRILALLALFLIGSATVASAAEDVTAGQSVIRAQEEALSRDDAA
                     TAYTFASPGIQRRFHDPETFLSMVRNGYTPVYRHRSFEFGEAKASDGAILQEVHIIDA
                     NGVAWEALYTLETQPDGSLKISGCVLTKAVIS"
     gene            complement(5176..5853)
                     /locus_tag="VNY79_05440"
     CDS             complement(5176..5853)
                     /locus_tag="VNY79_05440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HWX71923.1"
                     /translation="MGTQHTLEEVGSRLPPTRERTGSLEHRPRKLRSSPDQQIGRRSP
                     RFPRFAASRLGTLALCVVAIGVAALAGCGESAPPPGQPTFYQDLAQTDAAVDAAVAQS
                     MISGYRSNNGLGPVVVDSDLMRLACEQARAMAARDKMDRDVGHPFHERMRKAGVGGSV
                     AVENVGAGYHTLAEAFSGWRDSPPHRANMLNRGVTRMGIATAYAPASKYKVFWALILA
                     GPDGRRG"
BASE COUNT         1042 a         2063 c         1946 g         1013 t
ORIGIN      
        1 gagaccggct ttgaccttcg cttcgaggct cacctcggcc gcccgcacgt cggcaagttt
       61 cgcgagcacc gcctgcgcct gcttgagcgg cacgacgacg acgccatcgc ggtcgccgac
      121 caggatatcg ccggattcaa cggcaacgcc gccaaccacg atcggcaatc ctaccgtccc
      181 cggcccgttg cgggccgccg aattcgccgt gagccccgcg cagtagaccg gaaggccgac
      241 ggcaaggacg ccggcgaggt cgcgcaccga accgtcggtg acaaatccgg caacgccgcg
      301 attgcgggcc atgcccagca gcagatcgcc ggcgatcgca gtgtgggtga aagcgtctgt
      361 cgcggccacg acgatgtcgc cctgcctggc ggcaatgcag cgcgccgaaa accgcgaggc
      421 cgtcggaggg gccggcgtag caagtgaccg ccgttccgac catgacctgg ctggactgga
      481 ccagcggctt gatccggcaa tcgaggcagc ccaatccgcc catcgcatcc accacatttc
      541 cggtcggcac gccggagaac ccggcgatca gctcatcgga cggccgcgga aagtttcgcc
      601 tgatcgtcag caggggcgga tcttcgatca ttgtctgtta cctcgcctgc acgcattggg
      661 tcgtgatcat tgcggtatcg gttcaagctg ccgccacgcg gttcacgatc tcggcgcatg
      721 gtcgccgaga ctcatgatcc gccggaattt gctcaggtca tcgcggtccc ctcgaggaag
      781 atcatcatgg gcggctgctc gcggtgattt catcgtgcct cgcggctcgc cgcgtcagat
      841 agtccggtcc gatctccgcg atcgtgcgga cgccgagaag tcccatcacg cggtcgacct
      901 cgcggcgcag gatgtcgaga acgcgcgcca caccagcctc cccggccacg gcgagaccga
      961 aaagatgcgg gcgtgcaatc aggcacagcg aagcgcccaa cgccagcgcc ttgacgacat
     1021 ccgccccgcg ccggatgccg ccatcgatca gaacggggat gcgcccgccg accgcggcga
     1081 ccacgcccgg cagggcatcc agcgccgcgg gcgcgccgtc gagttgccgg ccgccatggt
     1141 tggaaacgat caccccctcg atcccgcgcg cgatcgcctc ggcggcctcc ttgggatgaa
     1201 gaatgccttt cagcagcagg ggacccttcc acatcccgcg cagccactcg acgtcgcgcc
     1261 aggacatcga cggatcgagc aggcttgcga tcttggcggc catcgcgctg atgtcagccg
     1321 cggcacccgg gctcgtataa ttggcgaagt taatctttga cagccggggg cccatgcgta
     1381 ggagccaagg cagtttggca gccatcgcca taacgtcgag cggcgagaac cgcggcggga
     1441 tggtgaagcc gttgcggata tcgcgctcgc ggttaccgac gagctgatta tccgtggtca
     1501 gcaccagggc atcgaagccg ctcgccgcgg cgcgctcgac gaattcgcgg gtcaggccgc
     1561 ggtcgcgata gatgaagacc tgcatccagc gcggcccggc ggaactcgcg gcaagctcct
     1621 ccatcgtaca ggtcgaggca tggctcaggc aaaaggcggt gccggctgcc gcagccgcgc
     1681 gcgccgcggc gatctcgcct cccggccaga acaggccgga tagcccggtc ggaccgatca
     1741 tcaccggcag tgccaagcgc cgcccgaaca attcgaccga gagttcacga tcagccgcac
     1801 catgaagcgg ctgcggaagc aattcgaact gcgcaaacgc gtcctcgttg cgccgaagcg
     1861 tatactcgtt ctcggcgccc ccatcggcga agtcgaacac cgggcgcggc agggtgcgtt
     1921 gcgccatcgc ccggatggct gcgagactgt aggcagaacg atgccaagac ggagatgcgg
     1981 ttgtcatcgg gagatgaatg cgatgcagag catagcacga cccgggaagc tgcacatcgc
     2041 ggccattctg cgtagatcgg cgcggcctca acacgggaac tgtcgatgag caaccagtcg
     2101 atgggagcgg cgaagcccgg cgcgcccgaa ctcatcgccg caggcctcgg ctggcccgag
     2161 ggaccgactg tgatgccgga tcattcgctg gtgttcgtcg acacctatcg gtcgcagctg
     2221 acgaccatcg gcccggaccg tgtccctcga cgcttcgcct acaccgccgg cggaccgaac
     2281 tcgtgcgtgc tcggttccga tggcgcgctc tacgtgtgcc agaacggcgg cacgacgggc
     2341 ccctggcggg ccaaggaaat ggtcgagccg tcgatccagc gggtgcatgc gggcggcaag
     2401 gccgaaaccc tgatcactca cgtcgagggc atcaagctca acggccccaa cgacctcgcc
     2461 ttcgcgcctg acggcagcct cgtgttctcc gaccccggca cctataacct gaagaacccc
     2521 gatccgagct acatccacaa gatcactccc gatggtgtgg caaaggtcgt catcgccttc
     2581 ccgaagcccg tttttcccaa cggggtcacg gtcgaggcgg acggctcgat cgtctgggat
     2641 gagtcctaca ccgggcgggt cggacgcatt cggcccaacg gcaagatcga agatctcggg
     2701 cggctccccg gcgacaatcc aatccccgac ggattgaagg tcggcgccga cggccggctc
     2761 tacgtcaccg acatcctggc caaaggggtc catgtgctgg cgcccgacgg cgaggtcgac
     2821 aggttcatcc cttgcgggat tgccccaacc aattgcgcat tcgacggcga aactctttgg
     2881 ctcaccgatg ccggcacact ggcggtgagc gccgagccct cgaatgaggg ccggatctgg
     2941 cgcctgcaca ttcccggcgg cggcgcgccg acctacaaag gctcgatcgc ggtgccaaag
     3001 cgctgaggca cgcgcccaca atcactgaac catgcgcgca ttcggccgcg gaagcgcgaa
     3061 gcgctctggc gaaaattccc cccgcccaag catttcagtc gcgcatcctg cgagggtgaa
     3121 gtgccggccg tccgaccccg ccttcgactc atgcaaattt acgacgcgtc ggctggaatc
     3181 ggcacctttc tatccctgga attccccctc tatccttgca attcccgcgg tgaaccggtg
     3241 atgtaggccc atggacgcga tggtcgatac gaagtcccga caggccacgg gtaaggcgct
     3301 cgccgcccgt gacgcgctgc gcgattcctt cggcgtatgg acccacgtgt cggttgcggg
     3361 gatcgggggg ccggcgaagc agatcgcgac catgcaccgg ctggccgtcg aaggaaagcg
     3421 ctggatctcc gaggacggct tcttccatgc actgagctac tgcatcgccc tgccggggcc
     3481 ggagacgcaa cagctggcca tctatgtcgg atggctggcc aaccgcacga tcggcggcat
     3541 cattgccggc ggcctgttca tcctgccggg cgcgatctgc atgatggccc tctccttcgg
     3601 ctatgtcctc ggcgccgagt cgcaagccgg gcaggcgata ttcgtcggcg tcaggccggc
     3661 gatcctggcg atcatggccg aggctatcgt gcgcttcggc cggcacgtgc tgcacggtcc
     3721 actcatgctc gcggttgcgg cattggcgtt cctcgccgcg ttcttcaagc ttccgctccc
     3781 cctgatcatt ttcgtgccgg ccttgctggg catcgctgcc gcgatggcga ggctgcccgg
     3841 cttcacgaga ccggcggccg ccacgacgga ccgcgccgcc ggcgcgcaca agcgcgaagg
     3901 attggccgat catgcgcggc ccggcatcgc gcagttggca cgctcgctcg ccatatggct
     3961 ggcgctctgg cttgcgccgg cgataactct ctttgccatc ttcggcatgg acaacattta
     4021 cacccagata tcgttggcgt tcgggaaagt cgctctgatg gctttcggcg gcgactatgc
     4081 ggtcgtggtc tacggcgcga agcaggccgt tgattcgtac cactggattt cgacgcgcga
     4141 ggtgcaggag ggcatcgcga tgggcgagat cgtgcccggc acgatcatga tcgtcacgca
     4201 attcttcggc ttcgtcgccg cctatcgcga tccgggcaac ctgccaccgc tacttgccgg
     4261 cgtcttcggc ggcctcttgg ccacctggat gacattcatt ccctgctttc tctggatttt
     4321 gtcgattgct ccgttcatcg aaggcttgcg gcgcaaggcg attctcagca acgccctgca
     4381 ggccgtcacc gccgccgccg tcggcgtgat cttcaacctc acggtctggt tcggcattcg
     4441 gaccttgttc cgcgtggtcc aaccggtcca atacggccag ctcaacttcg atgtacccga
     4501 tttcgcgagc ttcgacccgt gggcattggc gctgtttgcc tgcgccgcga ttgcggtgtt
     4561 ccgtttccag atcagcgccg ccatgactct cgtcgcatca tcggcggccg gcattttgct
     4621 tctatgggtt ggcctcgccg ggtgacccgt tacgcgggag cagcacgatg cgcatcctcg
     4681 ccctactcgc cctgtttttg atcggttctg cgacagtcgc cagcgccgcc gaggatgtca
     4741 cggcgggaca gtctgtcatc cgcgcgcaag aagaagcgtt aagccgcgac gacgcagcga
     4801 cggcctacac ctttgcctcg cccggcatcc aaaggaggtt tcacgacccc gaaactttct
     4861 tgtccatggt gcgcaatggc tatactccag tctatcgcca ccggagcttc gagttcggcg
     4921 aggcgaaggc ctcggacggc gcgattctgc aggaggtcca catcatcgac gccaacggcg
     4981 tggcctggga ggcgctctac acgctggaga cgcagcccga cggaagcctg aaaatcagcg
     5041 gctgtgtcct gaccaaggcg gtcatatcct gagactgagg ctggcgaccc ctgagagggt
     5101 gcggccggcg atggcgagtt acggcaacgc gcgcgccccg cgttgaacct cggagccggc
     5161 gccggaggcc gggcgtcacc cgcgacgccc gtcgggcccg gcaaggatca gcgcccagaa
     5221 caccttgtat ttcgaggccg gagcataggc cgtggcaatt cccatgcggg tgacgccgcg
     5281 gttgagcata ttggcgcgat gcggcggcga atcgcgccag ccggagaagg cctcggcgag
     5341 cgtgtgatag ccggcgccga cgttctcgac cgcaacgctg ccgccgacgc cggccttgcg
     5401 catgcgctcg tgaaacgggt gcccgacgtc gcggtccatc ttgtcacggg ccgccatggc
     5461 gcgggcctgc tcgcacgcaa gccgcatcaa gtcggaatca acgacgaccg ggccgaggcc
     5521 gttgttgctg cgatatcccg agatcatcga ctgcgccacg gcggcatcga ccgccgcgtc
     5581 ggtctgcgcg aggtcctgat agaatgtcgg ctgcccgggc ggcggtgcgc tctcgccgca
     5641 gccggccaac gcggcgacgc cgatcgcgac gacgcacagc gcgagcgtcc ccaaccgcga
     5701 tgcagcgaag cgcggaaacc gcgggctgcg ccgaccaatt tgctgatccg gagagcttcg
     5761 cagcttccgc ggccggtgct cgaggctgcc ggtccgctcg cgggtcggcg ggagccgcga
     5821 accgacctct tcgagcgtgt gctgggtgcc catccgatcc ccgaatcgcg cgcgcggcac
     5881 gtcgcttacc acggcaatgg acgaaattcg acggcggcga ccgcgctatc gcgcttcaac
     5941 cagcgcggtg tgaggagagg cttgcgcggc caagctcgcc gatccgcgac agatagaacc
     6001 ttgcccgtgc aggatcgatt cgtgacacgg ccatgccgag cgcgatcgcc acgccctcga
     6061 tgac
//
LOCUS       DATMQB010000179         4665 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3774593, whole genome shotgun sequence.
ACCESSION   DATMQB010000179 DATMQB010000000
VERSION     DATMQB010000179.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4665)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4665)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4665
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3774593"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..492
                     /locus_tag="VNY79_05445"
     CDS             <1..492
                     /locus_tag="VNY79_05445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71924.1"
                     /translation="IVEYAEANHGLNVVGTGSPADNPAPDVAGSAGSGKTVQPAGVTV
                     PDARGDVQNWTSARNLTIDGRRYDFIVDRSTQPLWPGDFNQGGYMGRWGPRVETDPFG
                     RRRHALPSFLAPLLPGVCQRESVRCALNGARAGPVPAAGSGRLIRTLHSFHSFQRGGR
                     RSM"
     gene            776..1585
                     /locus_tag="VNY79_05450"
     CDS             776..1585
                     /locus_tag="VNY79_05450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71925.1"
                     /translation="MVTPKTGTERGAAAIFLIAALVAVFSMVAFGVRYRDEVLVGVAG
                     LAVTGVVYKIANVSSARRIFLLLIVLLGLAATGVAEYKLVVGKYFAGTLTEPLWQSVK
                     AYWKSPAVATHRDLAAAAAAGVVLAIIGFFYARSKRALAAVPLSILAVTTAAMAGILV
                     YQSPFVSRYVDVASALGPKAPPEQNAFTSRIPPAPPKVQSRLPKYATVSNGAAALGLR
                     SCPVTCPIIAWVPNGATVKIVGSGERGWPEVETTMVGGATFHGFADGTMLR"
     gene            1658..1969
                     /locus_tag="VNY79_05455"
     CDS             1658..1969
                     /locus_tag="VNY79_05455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71926.1"
                     /translation="MPKACFVVRSVVEEPSREKFDHWYATDHFPEALAGLKPEKGWRF
                     WSAREAGVHYAVYRFADMVRLDAALKSEAYKALAIDFDRSWPAVTRTRDMLDLVQESD
                     G"
     gene            complement(1998..2768)
                     /locus_tag="VNY79_05460"
     CDS             complement(1998..2768)
                     /locus_tag="VNY79_05460"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX71927.1"
                     /translation="MPKTPDYFAGKTIIITGAASGIGRATALIFAREGANVVCADIDE
                     AGARSTAEMVNGKRSQALALQVDVTARAAVSGMVERSLAAFGSVQFLFNSAGAAIRRA
                     KFLEIDDALMEKTFALNVNGTFYAMQAVLPHMLANKHGVIVNMASMAHRRGGPGSSIH
                     YAAAKGAVVTMTMGVAREFAAAGIRALSISPGPIRTPFQAAAQSSPELIQRFLEDVPM
                     QRFGEPEEIGELVLFVCSDACAFMTADTVYVNGGGGWR"
     gene            3050..3445
                     /locus_tag="VNY79_05465"
     CDS             3050..3445
                     /locus_tag="VNY79_05465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HWX71928.1"
                     /translation="MPHYTALVTLVAILFYFYTGVRVPRARSKFGLTAPAMTGPPEFE
                     RIFRVQLNTLEWMPIFLPLMWLFAYYVSDIGAAALGVVWVAARVWYMVGYTQAAEKRG
                     PGFGLQAAVCGVLLIGALVGIINALMHGG"
     gene            3551..4444
                     /locus_tag="VNY79_05470"
     CDS             3551..4444
                     /locus_tag="VNY79_05470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HWX71929.1"
                     /translation="MPRTFEDVAIFAAPGVFVVLWASGFIGAKLGLPYAEPLTFLALR
                     MFGVVVLLGLFMLIAGAKWPGREGALDSYVTGVLMHALYLGGVYISIAKGLPAALSAL
                     VVGLQPLLTSTIANRLLGERVAPRQWVGLVLGLSGVYLVVQDKATVGAATPLAWIAAV
                     VGLVAITIGTVYQKRFGSGIDWRPAMFIQYAAAGILFALGATAFESRSVRWTPEFLFA
                     LGWLVFVLSFGAIWLLYFLIRRAAATRVVSLFYLTPPVTALMAWSLFGERLAPLALVG
                     MAVCVAGVFLANWRIDGKNTR"
BASE COUNT          732 a         1535 c         1565 g          833 t
ORIGIN      
        1 atcgtcgaat acgccgaggc gaaccacggc ctcaatgtcg tgggcacggg atcgcccgcc
       61 gacaacccgg cgccggacgt cgccggaagt gccggcagcg gcaaaacggt gcaacccgcc
      121 ggcgtcaccg tgcccgatgc cagaggcgat gtgcagaact ggacctcggc gcgaaacctc
      181 acgatcgacg gtcggcgcta cgacttcatc gtcgaccgca gcacgcagcc gttgtggcct
      241 ggcgatttca atcagggcgg ctatatgggc cgctggggac cgcgcgtcga gaccgatccc
      301 ttcggccggc gccggcatgc gcttcccagc tttctggcgc ctcttcttcc tggcgtttgc
      361 caacgggaaa gcgtccggtg cgctctgaac ggcgcccggg cgggcccggt gccggcggcc
      421 gggagcgggc gacttatacg cacattgcac agtttccaca gcttccagag agggggccgc
      481 cggtctatgt gacggtatgg cgaccagtag ggtaaaaagt cgcttgccgg caacgggtta
      541 acaaggataa atttgtcctg gggggtagtt ggtcttgttc ggtccgcctg tgagttctcg
      601 tgatcccaaa aaatctggcg gcgctgccga ttggcggcag gagtcagagc agtatcgcca
      661 ttggggtctg tcttcagggt ccgtgctggt gccgggcagg cgcggctcgt cgaagggcac
      721 gagtacggcg ccgcaaccca agacacgggc tcccacaagc aactggcgcg gtaccgtggt
      781 aacgcccaag accgggacgg aacggggcgc ggccgcgata ttcctgatcg cggcgctggt
      841 cgcggttttc tcaatggtcg catttggcgt gcgctatcgc gacgaagtgc tcgtcggggt
      901 ggccgggctc gcggttaccg gcgtcgtcta caagatcgcg aacgtctcct cggcgcggag
      961 aatttttctc ctcctgatcg tgctcctggg tttggcggcc accggcgttg ccgaatacaa
     1021 gcttgtcgtc ggcaagtatt tcgccggcac gctgaccgag ccgttgtggc aatccgtgaa
     1081 ggcgtactgg aaatcgcccg ctgtcgcgac acaccgcgac ctcgccgcgg cggccgcggc
     1141 cggtgtcgtc ctcgccatca tcggattttt ctacgcgcgg tcgaaaaggg cactggccgc
     1201 cgtcccgctc tcgatcctcg ccgtcaccac ggcggccatg gccggcatcc tcgtttatca
     1261 atcaccgttc gtcagccgct acgtcgacgt tgccagtgcg ctcggcccga aagcaccgcc
     1321 ggagcagaac gcgttcacga gccggattcc gccggcgccg ccgaaggttc agagccgctt
     1381 gcccaaatat gccaccgtca gcaacggggc ggcggcgctc gggttgcgat cgtgcccggt
     1441 cacatgcccg atcatcgcct gggtgccgaa cggagcaacg gtgaagatcg tcggctccgg
     1501 tgaaagaggc tggccggagg tggaaaccac gatggtcggc ggagcaacct tccacggctt
     1561 tgccgacggg acgatgttgc ggtagccccg ccgccgacaa gcacgcaaag caggctttgg
     1621 cgcggccgga tgagcgcggg tcgccggaga tgatgtgatg cccaaggcct gtttcgtcgt
     1681 ccgctccgtc gtcgaagaac cgtcgcgcga aaagttcgac cattggtatg cgaccgacca
     1741 tttcccggaa gccctcgcag gcctcaaacc ggagaaaggc tggcgcttct ggagcgcgcg
     1801 cgaggccggc gtgcactacg cggtctatcg tttcgccgac atggtgcgcc tcgacgccgc
     1861 cctcaaatcg gaggcctata aggcgctcgc catcgatttc gaccgttcct ggccggccgt
     1921 cacgcgcacc cgcgacatgc tcgatctggt gcaggaatcg gacggctgac gcattgccgc
     1981 agtagcggac cgcagctcta ccgccagccg ccgccgccgt tcacgtaaac ggtgtccgcg
     2041 gtcatgaagg cgcatgcgtc cgagcagacg aacagcacca gttcgccgat ctcctcgggt
     2101 tcgccgaacc gctgcatcgg cacgtcctcc agaaagcgct ggatcagttc cggcgaagac
     2161 tgcgccgcag cctggaatgg cgtcctgatc gggccgggcg agatcgacag cgcgcggatg
     2221 ccggcggccg cgaactcgcg cgccacgccc atggtcatgg tcaccacggc gcccttggcg
     2281 gcggcatagt ggatcgacga gcccgggccg ccgcgccggt gcgccatgct tgccatgttg
     2341 acgatgaccc cgtgcttgtt cgccagcata tggggcagca ccgcctgcat cgcatagaac
     2401 gtgccgttga cgttgagcgc gaaggtcttc tccatcagcg cgtcgtcgat ctcgagaaac
     2461 tttgcccggc ggatggcggc gccggcggaa ttgaacagga actgcacgct gccgaaggcg
     2521 gcgagtgagc gctcgaccat gcccgaaacc gccgcgcgcg cggtgacatc gacctgcaag
     2581 gcgagcgcct ggctccgctt gccgttgacc atctccgcgg tggagcgggc gccggcttcg
     2641 tcgatgtcgg cgcaaacaac gttggcgccc tcgcgggcga agatcagcgc ggtggcgcgg
     2701 ccgatgccgc tcgccgcgcc ggtgatgatg atggtcttgc cggcaaaata gtcaggcgtc
     2761 ttcggcatgg ccgctcgtac ccggtggcgc cgggccgatt gtgcccgctc gggcggccag
     2821 ccacaatcga agcttcatga ggcacggcgg cttccggacg acgacgtcgc gcgtcgtccg
     2881 ggcccggtgc gtttgttctg agctttccga aatggggttt cgggcagcct acccgaacgc
     2941 gaagcaatca actcaaatgc gatgcgccgg cgctcctcgc ggtgccgcgg gcaacgctct
     3001 cgcaccccaa gcgggtgacg gatagagtga gcgggggagg agctgggtta tgccgcacta
     3061 caccgcactc gttacgctcg tggccatatt gttctacttc tacaccggag tgcgcgtgcc
     3121 gcgggcgcgg agcaagttcg gcctgaccgc gccggcgatg accggtcctc ccgagttcga
     3181 gcgcatcttc cgcgtccagc tcaacacgct ggagtggatg ccgatcttcc tgccgctgat
     3241 gtggctgttc gcctactacg tcagcgatat cggcgcagcg gcgctgggcg tcgtctgggt
     3301 cgcggcgcgg gtctggtaca tggtgggcta tacccaagcc gcggaaaagc gcggcccggg
     3361 cttcggcctg caggcggcgg tctgcggcgt cctgctcatc ggcgcgctgg tcggcatcat
     3421 taacgcgctg atgcatggcg gctaggccgc acgcgcgccg gttcgcccac gccgatacgc
     3481 gatacacgct gaacaatccc gcaacgccga tccgcccttc cgacccccca cggacgccgg
     3541 gccgatgaga atgccgcgca ccttcgagga cgtcgcgatc ttcgccgcac ccggcgtgtt
     3601 cgtggtgctg tgggcgtccg gcttcatcgg cgcgaagctc gggctcccct acgccgagcc
     3661 gctgaccttc ctggcgctgc gcatgttcgg cgtcgtggtg ttgctcggcc tgttcatgtt
     3721 gatcgccggc gccaagtggc cgggccgcga gggcgcactc gacagctatg tgaccggcgt
     3781 gttgatgcat gcgctctatc tcggcggggt ctacatctcg atcgcgaagg gtcttcccgc
     3841 cgcgctctcg gcgctcgtgg tcggcctgca accactgctt acctcgacaa tcgccaatcg
     3901 gctgctcggc gagcgggtcg ctccgcggca gtgggtcggc ctggtcctcg gcctttccgg
     3961 cgtctatctc gtggtgcagg acaaggcgac cgtcggcgct gccacgccgc tcgcctggat
     4021 cgctgcggtc gtggggctcg tcgccatcac catcggcacg gtctatcaga aacggttcgg
     4081 cagtggcatc gactggcggc cggccatgtt catccaatat gcggccgccg gcattctctt
     4141 cgcgctcggg gcgacggcgt tcgagagccg gagcgtccgt tggacgcccg aatttctgtt
     4201 tgcgctcggc tggctcgtct tcgtgctgtc gttcggcgcg atatggctcc tgtacttcct
     4261 catccgccgc gccgcggcga cgcgcgtggt cagtctgttc tatctgacgc cgccggtgac
     4321 ggcgctgatg gcctggagcc tgttcggcga acgcctggcg cccctggcgc tcgtcggcat
     4381 ggcggtctgc gtcgccggcg tgttcctggc gaattggcgc atcgatggca aaaacacccg
     4441 ctgaccggta acgtggcggc gagcgacatc agtcaccggg agcaagacgc catgagcggc
     4501 cgccgatcga ttgaataccg cgacgcctcg cccgaagtcc gcgccgtgtt cgacgacatc
     4561 aagcacgcgc ggcgggtcga tgacgtgaac aatttctgga aatacctcgc gcgcgatccg
     4621 gcaacgctca ggcgcacctg ggagagtgtc aaggaagtca tggcg
//
LOCUS       DATMQB010000180        11988 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4084201, whole genome shotgun sequence.
ACCESSION   DATMQB010000180 DATMQB010000000
VERSION     DATMQB010000180.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11988)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11988)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11988
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4084201"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..524)
                     /locus_tag="VNY79_05475"
     CDS             complement(<1..524)
                     /locus_tag="VNY79_05475"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71930.1"
                     /translation="MQQKAQPRGPLVWRDMDQQALDRAYDQGVYAPNRDQVLGRIAAA
                     SERARKTLGAPQRVAYGPSEQERLDIYRAAAPARSPAARGSAKDRGAPVGAPVNVFVH
                     GGAWRGSSAAENAFAAEALVGAGAHAVIIDFVNVDQAGGDLTPICRQVSRALAWVWRN
                     AESFGGDPDRLFVSA"
     gene            complement(577..2235)
                     /locus_tag="VNY79_05480"
     CDS             complement(577..2235)
                     /locus_tag="VNY79_05480"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004333 - fumarate hydratase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarate hydratase"
                     /protein_id="HWX71931.1"
                     /translation="MNAPLSTHPTPPYRHTPLFPLGKDQAPYRKLSADGLGVERALGE
                     EVLVVSREALRVLAEAAFTDINHLLRPAHLASLKAIVEDPEASDNDKFVAYDFLKNAN
                     IAAGGVLPMCQDTGTAIIMGKKGRLIWTDGDDEAALAQGARDAYLKRNLRYSQLAPIS
                     MFEEKNTRSNMPAQVEIYSEGAGEADAAYKFLFIAKGGGSANKSFLFQATPSILSRER
                     MLAFLKEKVLTLGTAACPPYHLAIVIGGTSAELTMKTVKLASCRYYDALPERGSEDGH
                     AFRDREMEREIHTMTQALGVGAQFGGKYFCHDVRVIRLPRHGASLPIGLGVSCAADRQ
                     ALGKITRDGVFLEELEHNPAKYLPEVDTQKLGGAVVQIDLNRPMQEILAQLTKYPIKT
                     RLSLSGTMIVARDAAHAKLRERLEKGTGLPDYFKNHPVYYAGPAKTPEGYASGAFGPT
                     TAGRMDSFVEDFQAAGGSLVMLAKGNRAAAVREACRKHGGFYLASIGGAAANLAELCI
                     KKVECVEYPELGMEAIWRIEVVDFPAFIVVDDKGNDFFQELNLG"
     gene            complement(2548..2799)
                     /locus_tag="VNY79_05485"
     CDS             complement(2548..2799)
                     /locus_tag="VNY79_05485"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71932.1"
                     /translation="MGDQHGEGIADSAKLLAVGGGVGEHVSLDRGIARLAVDLTSPSW
                     PPVMNAVNGLIDWTTSPDKGSLNTGMRGSPLLHLAGAAV"
     gene            3190..3558
                     /locus_tag="VNY79_05490"
     CDS             3190..3558
                     /locus_tag="VNY79_05490"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71933.1"
                     /translation="MNNAVHQLTKLILEAMARVLNTAAALWVWSWTQIAALFGMAWGD
                     LPGWKLAVGIAVLAVLAAILVIVAIRAWDALGRIAAAFWTMALTLFTLLAFVIAAGLF
                     SRGFQWVVASMPDKLGVGAL"
     gene            3747..4607
                     /locus_tag="VNY79_05495"
     CDS             3747..4607
                     /locus_tag="VNY79_05495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HWX71934.1"
                     /translation="MDTVRLCYRVFRDAFYRFNSDDGWAIASHIALSVLMAMFPFLIV
                     VTGIAGFIGSNNLANEVASLIVAAWPPEVADPIANEIQRVLTGAHGGVLTLGAVFAVY
                     FASSGIESLRIGLNRAYGLDEERSWWLLRLESIGYVLVSAVALLVLAFVVVLGPLIFK
                     AAVAYVPWIQPLEAHYNVARFGVGGIVLAVALTILHMWLPYGQRTLGGIWPGIAATLV
                     LWLACGIAFGRYLSGFAYTYVTYYAGLASAMIALVFLYYSAWIFIFGGELNAAIARVR
                     AAASLQTLPP"
     gene            complement(4612..5919)
                     /gene="ccrA"
                     /locus_tag="VNY79_05500"
     CDS             complement(4612..5919)
                     /gene="ccrA"
                     /locus_tag="VNY79_05500"
                     /EC_number="1.3.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043880 - crotonyl-CoA reductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="crotonyl-CoA carboxylase/reductase"
                     /protein_id="HWX71935.1"
                     /translation="MAVAQKKPSAAPLKDLYAIGEVPPLGHVPATMHAWAIRKDRHGP
                     PETSMQLEVVPTWPIAEDEVLVYVMAGGVNYNGVWAGLGQPISPLDVHKNPFHVAGSD
                     ASGVVWAVGSKVRRWKVGDEVIVHCNQDDGDDEECNGGDPLLSPSQRIWGYETPDGSF
                     AQFCRVQSRQLMPKPAHLSWEESACYTLTLATAYRMLFGHAPHILRPGDNVLVWGASG
                     GLGVFGVQLVAASGANAIGIISHESKAEYVFNLGAKGVINRSAFKCWGAMPKVGTPEY
                     DGWVKEARRFGKAIWDITGKRDVDIVFEHPGEATFPVSCLVVKRGGMVVFCAGTSGYN
                     ITFDARYVWMRQKRIQGSHFAHLKQASAANQFVIDRRIDPCMSDVFPWEKIPHAHELM
                     RTNRHKPGNMAVLVNTPRLGLRNLDDVIEAASLPELTRQSNRV"
     gene            6119..6370
                     /locus_tag="VNY79_05505"
     CDS             6119..6370
                     /locus_tag="VNY79_05505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020085783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GlsB/YeaQ/YmgE family stress response membrane
                     protein"
                     /protein_id="HWX71936.1"
                     /translation="MDAQSIIIWLIVGAIAGWLAGMVVRGGGFGLIGDIIVGIIGAVI
                     AGWLLPRIGIIIGGGFVAAVINAFIGAVILLIILRLLRR"
     gene            6463..7653
                     /locus_tag="VNY79_05510"
     CDS             6463..7653
                     /locus_tag="VNY79_05510"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 87 protein"
                     /protein_id="HWX71937.1"
                     /translation="MALYETSPAGSAGTKLARPVDLICFALIVAQVVYLAACYVEGSW
                     LTMRDGGGVPSDFVNVWAAGRMALAGHAASVYDWPAHKLVEESAVGHGFDGYFGWHYP
                     PTFLFVAAALSLIPYATAWVIWTFGTFPAYLAAIRAIIGDRVGYFLGAAFPAVLANFI
                     VGQNGFLTAGLVGGALTLIERRPALAGVLIGLLTYKPHLGLLFPIAIVAGGHWRAFAT
                     ATVVAVLIAAASWLAFGSESWNAFFASIGHTSQAFLSDGWADWSKLQTAFGLTRTLGG
                     SETLAWTLQIAVALLAAVGVAVLWRSRAGHEIKAAALATAGLLATPYLYMYDLVVLAV
                     PLAFLCRLGARGFLPHELPAIGVACLLISIFPFIKAPLGFGAVVIVGALIVRRVFASQ
                     SIAA"
     gene            7650..8885
                     /locus_tag="VNY79_05515"
     CDS             7650..8885
                     /locus_tag="VNY79_05515"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF021134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 87 protein"
                     /protein_id="HWX71938.1"
                     /translation="MSAHEAAPAAAQGVAARRPTPERLISLLGLTLALGYLAVLVTAA
                     LGGNFLLDGEGRPIANDFVNVWAAGRLALDGNPAAAYDWTLHKAAEVRAVGHAFANYY
                     GWHYPPPFLFVATALATLPYLVAALVWLAATLTAYAATLGGILRSRAGILLALGFPAA
                     LWNVTACQNGFFTAALIGGTLGLLERHPALAGLCLGFLTYKPQFGLLFPIVLIADRRW
                     LTIAVAALAAGGLAAASWLAFGGACWEAFLHWMPITGRVVLGEGAADWSRLQSLFGLM
                     RAHGAGEALAWTVQSAGSFAVAAALILLWRSRACYEIKAAGLAVGALLATPYIYMYDL
                     VVLAVAIAFLLRLPLQRGFSAADSGALAAAGILILAFPYVKTQVGLAAVLIVAALIVK
                     HTLADKNRSSAKIAARPTR"
     gene            complement(8898..11600)
                     /locus_tag="VNY79_05520"
     CDS             complement(8898..11600)
                     /locus_tag="VNY79_05520"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71939.1"
                     /translation="MIESIMYLGIGFLAASISVLAVVPIVHTRAVRLTTRQLADTMPS
                     SVAEIAADKDLLRAEFAMSTRTLEMKVDQLKGKGANHLLELGKSSNTVNHLRIELDAL
                     RERLHTTDEQLASESAALKVAEHALADRASELATLMCDLEQQSILSDGQKIEIVTLKT
                     QVEALKVRLEANNNELQAVYKCRDAEQIEFEARVDALTIAAQKAEATLADREAELAKL
                     SDDFNAQTMLSETQTARIVTLDGEIETLRKRLDTANSELKTGEDHRNELTAAIKTAEL
                     ALSEKDLDASQLVGELSERAAFAYAQANEIFTLKGEVDALTGRLDETHKALRAAEDRG
                     HELSAAVENAERVLSKRESEVTRLTSELDARAMLGQAQTNEIFVIKAEVDTLAGRLNE
                     ACAALNAAEDRGQGFAAAAGHAEQALLAKESEIARLIAELDERSTLSEAQASEIRSLE
                     AEVESITGRLDETSQALNTADDGRDALTVAVEKAERALSAKESDLARLAGELNEHSTL
                     SEAQANEILGLKAEVESLTARFDETSKALNTAEDQRHALTSAAEKAEWALSAKESEVA
                     RLIGELNVHSTLSEAQTSEIVSLTAEVETLTARLDEAGKALSAAKDGHYALIAAAENA
                     ERSLSAKESELARFSGELNARSTRSEAQTNEMLGLKAEVRTLTGRLDEACNALTAAED
                     HRYALTVAAENAERALSEKEADLARLTGELNERSTFADIQAKELVALKAYVGAIKERL
                     DAANNELQAVEDRRAAEQLELDAAIQGVMGERARFVSFHGRVAELVEQLVEQTSEDKN
                     LARRARDLENRLAEQSRLLEASDCERKQLRKEIDAALKTEAERRNAVITEIDNHAKAE
                     NAKLRAALDRANGDRTRLAYELATAKRQAHLLKAGEQQDGIVAA"
BASE COUNT         1809 a         4038 c         3800 g         2341 t
ORIGIN      
        1 gccgaaacaa acagccggtc ggggtcgccg ccgaagcttt cggcgttgcg ccacacccag
       61 gcgagcgcgc ggctgacctg ccgacatatc ggggtcagat cgccccccgc ctgatcgaca
      121 ttgacgaagt cgatgataac ggcatgagcg ccggcgccca cgagcgcctc ggccgcgaag
      181 gcgttttccg cagcgctgct gccgcgccag gcgccgccat ggacgaagac attcactggc
      241 gcacccactg gcgcaccgcg atccttcgca cttccgcgcg cggcagggga acgggcaggc
      301 gcggcagctc ggtagatatc gaggcgctcc tgctcgctcg gcccgtaggc tacgcgctgc
      361 ggcgcgccga gggtttttcg cgctcgctcg ctcgcggcgg cgatgcgccc aagcacctga
      421 tcacggttcg gcgcatagac cccctgatcg taggcgcgat cgagcgcctg ctgatccatg
      481 tcgcgccaga ccagcgggcc gcgcggctgt gccttttgtt gcatgaaggt tctcgaaagt
      541 gtctggcgat ctgcttctgc agagaggcga ctggtgtcac cccagattca attcctggaa
      601 aaaatcgttg cctttgtcgt cgacgacgat gaaggcggga aagtcgacca cctcgatgcg
      661 ccagatcgcc tccatgccga gctccggata ttcgacgcac tcgaccttct tgatgcaaag
      721 ctcggcgagg tttgccgcgg cgccgccgat cgaggcgaga taaaagccgc cgtgcttcct
      781 gcaggcttcg cgcaccgcgg cagcgcgatt gcccttcgcc agcatcacca gcgagccgcc
      841 tgcggcctga aaatcctcga cgaaggaatc catgcgcccg gccgtggtcg ggccgaacgc
      901 gcccgaggca tagccttccg gcgtcttcgc cgggccggcg tagtagaccg gatggttctt
      961 gaaataatcg gggagccccg tccctttctc cagtcgctcg cgcagcttgg cgtgggcggc
     1021 gtcgcgcgca acgatcatgg tgccggagag cgaaaggcgc gtcttgatcg gatatttcgt
     1081 gagctgcgcc aagatctcct gcatcggccg gttgaggtcg atctgcacca ccgcgccgcc
     1141 gagtttctgc gtatcgacct cgggcagata cttcgccggg ttgtgctcga gctcttccag
     1201 gaacacgccg tcgcgcgtga tcttgcccag cgcctggcgg tcggccgcgc acgacacgcc
     1261 gagcccgatc ggcagcgatg caccgtggcg cggcagccgg atcacgcgca cgtcgtggca
     1321 gaaatacttg ccgccgaact gcgcgccgac gccgagcgcc tgcgtcatcg tgtggatctc
     1381 gcgctccatc tcgcggtcgc ggaaggcgtg gccgtcctcg gagccgcgct cagggagcgc
     1441 gtcgtaatat cggcaggagg cgagcttgac cgtcttcatc gtcagctcgg ccgaggtgcc
     1501 gccgatgacg atggcgagat ggtaaggcgg gcacgccgcc gtgccgagcg tcagcacctt
     1561 ctccttgagg aaggcgagca tgcgctcgcg cgagaggatc gacggcgttg cctggaacag
     1621 gaacgatttg ttcgccgagc cgccaccctt ggcgatgaac aaaaacttgt acgcggcgtc
     1681 ggcctcgccc gcaccttcgg agtaaatttc cacctgcgcc ggcatgttcg agcgcgtgtt
     1741 cttctcttcg aacatggaga tgggcgcgag ctgcgaatag cgcaggttgc gcttcagata
     1801 cgcgtcgcgc gcgccctggg caagcgccgc ctcgtcgtcg ccgtcggtcc aaatgagccg
     1861 gcccttcttg cccatgatga tcgcggtgcc ggtgtcctgg cacatcggca gcacgccgcc
     1921 cgccgcgatg ttcgcgttct tcaagaaatc gtaggcgacg aacttgtcgt tgtcggaggc
     1981 ttccgggtcc tcgacgatcg ccttgaggct cgcaagatgc gcgggacgca ggaggtgatt
     2041 gatgtcagtg aatgccgcct cggcgagcac gcgcagcgcc tcgcgcgaca cgaccagcac
     2101 ctcttcgccc agcgcacgtt cgacgcccaa cccgtcggcg gagagcttgc gatagggcgc
     2161 ttggtccttc ccgaggggga acagcggcgt gtgcctgtag ggcggcgtcg ggtgggtgga
     2221 gagaggggcg ttcataggac gtccagtcca ggatgtcggc ggtcccccga atatatagca
     2281 agcgtagagt gggcaaagcg aagcgtgcgc gggcttgacc cgcgtatcca tgctgcgatc
     2341 tcgctcggcc ctacctcacc gccaatacgc gtcaggcggg actgccgcat ggattgccgg
     2401 atcaggcccg gcaatgacga ccagaccgca gcccggatgg agcgaagcgc aatccgggat
     2461 cggcgtttca gcctgcagtc ccgccccgga tttcgctgcg ctccatccgg gctacgattc
     2521 ctctctcctc acgccccgcc gccgccgcta cacggccgcg ccggcgaggt gaaggagcgg
     2581 ggagccgcgc atgcccgtat tcaagcttcc cttgtcgggc gatgtcgtcc agtcaatcaa
     2641 tccgttcacc gcgttcatga ccggcggcca gcttgggctc gtcaaatcaa cggccagtcg
     2701 ggcgatcccg cggtcaaggc tgacgtgctc tccgacgccg ccacctacgg caagcagctt
     2761 agccgaatcg gcgatgccct cgccgtgctg atcgcccatt tccatccgcg gcgccgctca
     2821 acgcgcagga gaaggcggcg atcgacgcgc tcaaggagat gctcgacaag atcgcggacg
     2881 tgaaggaaag gcacaagcgg gccgcggttc gcccggatgc ggtttcatcg gctccctagc
     2941 cgctcgtgcg tccgcgcggg cgctttcacg ccgcggcaca gcttggacaa tcccctgccg
     3001 cgccgggcac gtcggagccc ggcccatcgc atttgacgcg aatccgacga aatatcgctg
     3061 cgtttccttc agaagaagcg cggtggtcga cgtgtaacaa ggaacaagcg gcgcgctcgc
     3121 ggattctcca aaccgtcctc gcgcgcggcg aagcgagcga gcctgggcga aggcgcggag
     3181 ggaagagcca tgaacaacgc ggtacatcaa ttgacgaagc tcatcctgga agcgatggcc
     3241 cgggtgctca ataccgcggc ggcgctgtgg gtctggtcgt ggacgcagat cgcggcgctg
     3301 ttcggcatgg cgtggggaga cctgccgggc tggaagctcg ccgtcggcat cgccgtcctc
     3361 gccgtgctgg ccgccattct cgtcatcgtg gcgatacgcg cctgggacgc gctcggccgc
     3421 atcgccgccg cgttctggac gatggcgttg acgctgttca cgctgctcgc cttcgtcatc
     3481 gccgccggac tgttctcgcg cggattccag tgggtggtcg ccagcatgcc ggacaaactc
     3541 ggggtcggcg cgctctgaac gcgcgagcct tgcggcacac gcggcgggca tgagggcagc
     3601 aacccggcac aaggctcagc cgccggtccg gctgtcgctc cagcggtccg gccgcaagcc
     3661 gtacgaatcc atttccccaa gcgcgggctt cgccccggcc gcggaatgcc ctatctgatg
     3721 ggctcggcgc cgcgtggagg ggagccttgg acaccgtccg cctgtgctac cgcgtcttca
     3781 gggacgcgtt ctaccgcttc aacagcgacg acggctgggc gatcgcgagc catatcgcac
     3841 tctcggtctt gatggcgatg ttcccgttcc tcatcgtggt gacgggcatt gcgggcttca
     3901 tcggctccaa caatctcgcc aatgaggtcg caagcctcat cgtcgccgcc tggccgccgg
     3961 aagtggcgga cccgatcgcc aacgagattc aacgcgtgct cacgggcgcg catggcggcg
     4021 tgcttacgtt gggcgccgtg ttcgcggtct atttcgcctc gagcggcatc gagagcctgc
     4081 gcatcggtct caaccgcgcc tatgggctcg acgaggagcg cagctggtgg ctgctgcggc
     4141 tcgagtcgat cggctatgtg ctggtcagcg cggtggcgct gctggtgctg gcgttcgtgg
     4201 tcgtcctcgg gccgctgatc ttcaaggccg ccgtggccta tgtgccttgg atccagccgc
     4261 tcgaagccca ctacaatgtt gcgcgtttcg gcgtcggcgg catcgtgctc gccgtggcgc
     4321 tcaccatcct gcatatgtgg ctgccgtacg ggcagcggac gctcggcggc atctggccgg
     4381 gcatcgccgc gacgctggtg ctctggctcg cctgcggcat cgccttcggc cgctatcttt
     4441 ccggcttcgc ctatacctac gtgacctact atgccggcct cgcctccgcg atgatcgcgc
     4501 tggtgtttct ctactacagt gcctggattt tcattttcgg cggcgaactc aatgccgcga
     4561 tcgcgcgcgt gcgcgccgcc gcgagcctgc agacgttgcc gccctgacgc ctcaaacgcg
     4621 gttggattgc cgggtcagct ccggcagcga cgccgcctcg atcacgtcgt cgagattgcg
     4681 cagccccaag cgcggcgtgt tgaccagcac cgccatgttg ccgggcttgt gccggttggt
     4741 tcgcatcagc tcgtgcgcgt gcgggatctt ctcccagggg aatacgtcgc tcatgcacgg
     4801 atcgatacgg cgatcgatga cgaactggtt ggcggcgctc gcctgcttga ggtgcgcgaa
     4861 atgcgaaccc tgaatgcgct tttgccgcat ccatacgtag cgcgcatcga aggtgatgtt
     4921 gtagccggag gtgccggcgc agaacaccac catgccgccg cgcttgacca ccaggcagga
     4981 gaccgggaac gtcgcttcgc ccggatgctc gaacacgatg tcgacgtcgc gcttgccggt
     5041 gatgtcccag atcgccttgc cgaagcgccg cgcctccttc acccagccat cgtattcggg
     5101 agtgccgacc ttcggcatcg cgccccagca tttgaacgcg ctgcggttga tgacgccctt
     5161 ggcgccgaga ttgaaaacgt attccgcttt cgattcgtgc gagatgatgc cgatggcgtt
     5221 ggcgccggaa gcggcgacga gctgcacgcc gaacacgccg agcccgcccg atgcgcccca
     5281 gaccaagacg ttgtcgccgg ggcgcagaat gtgcggcgca tggccgaaca gcatgcggta
     5341 ggcggtcgcc agcgtgagcg tgtagcaggc cgattcttcc cagctcagat gcgccggctt
     5401 cggcatcagc tgccgcgact gcacgcggca gaattgagcg aacgatccgt ccggcgtctc
     5461 gtagccccag attcgctgcg acggcgacag cagcggatcg ccgccgttgc attcttcgtc
     5521 gtcgccgtcg tcctgattgc agtgaacgat gacctcgtcg ccgactttcc agcgccgcac
     5581 tttcgagccg accgcccaga ccacccccga agcgtccgag ccggcgacgt ggaacgggtt
     5641 cttgtgcacg tcgaggggcg agatcggctg accgaggccc gcccagacgc cgttgtagtt
     5701 gacgccgccg gccatcacgt agaccagcac ctcgtcctcg gcgatcggcc aggtcggcac
     5761 cacctcgagc tgcatcgacg tctccggcgg gccgtgacgg tccttgcgga tcgcccaggc
     5821 gtgcatggtc gccggcacgt gaccgagcgg cggaacctcg ccgatggcgt agaggtcttt
     5881 caggggcgcg gctgatggtt tcttctgcgc gacggccatt tgcaactccg ccttaaggga
     5941 gcgttcgcga ggtcaccaaa tcgcgacaac ttggtcttca gtttgcctca ccttatgttg
     6001 cactgcaaca actacttggg tgcataactg ttccaaagtg gtcccgccct gctgacagag
     6061 ggaaagcaaa ggccttagct tgcaggcgct tagcggttgc aggaaattgg gggaagcgat
     6121 ggacgcgcag agcatcatca tttggctgat cgtcggcgcg attgccggct ggctcgcggg
     6181 catggtcgtg cgaggcggcg gcttcggact gatcggcgac atcatcgtcg gcatcatcgg
     6241 cgccgtcatc gccggctggc tgctgccgcg gatcggcatc atcatcggcg gcggcttcgt
     6301 cgccgcggtg atcaacgctt tcatcggcgc agtgatcctg ctgatcatcc tccggctgct
     6361 gcggcgatag cgtcgggacg cggtcttgcg catggccgct taagggttct tcaaggccgc
     6421 cgcgcctagc gtcgccgcga cgcaagcaag gccggcgcgc cgatggccct ttacgagacc
     6481 tcccccgccg gcagtgcggg cacaaagctc gcgcggccgg tagaccttat ctgctttgcg
     6541 ctcatcgtcg cgcaggtggt ctacctcgcc gcctgctacg tcgagggcag ctggctgacg
     6601 atgcgggacg gcggcggcgt gccgtccgat ttcgtcaacg tctgggctgc cgggcggatg
     6661 gcgctcgctg gccacgctgc ttcggtctac gactggccgg cacacaagct cgtcgaggag
     6721 agcgctgtcg ggcatggctt cgacggctat ttcggctggc actatccgcc aacctttttg
     6781 ttcgtcgccg ccgcgctgtc gctcattccc tacgccaccg cgtgggtcat ctggaccttc
     6841 ggcacctttc ccgcctacct cgcggcgatc cgcgccatca tcggcgatcg cgtcggctat
     6901 ttcctcggcg ccgcgttccc cgcggtgctg gcgaacttca tcgtcggcca gaacggattc
     6961 ctcaccgccg ggctggtcgg cggtgcgctc actttgatcg agcggcgacc ggctttggcc
     7021 ggtgtcctta tcgggctgct gacctacaag cctcaccttg gcttgttgtt tccgatcgcc
     7081 atcgttgccg gcgggcattg gcgcgcgttc gccaccgcca cggtcgtggc agtgctgatt
     7141 gcggccgcgt cgtggctcgc cttcggcagc gagagttgga atgccttctt cgccagcatc
     7201 ggccacacgt cgcaggcgtt tctttccgac ggctgggcgg actggagcaa gctgcagacc
     7261 gcgtttggcc tcacgcgcac gctcggcggc agcgagacgc tcgcctggac cctgcagatc
     7321 gcggtcgcgc tccttgccgc ggtcggagtg gccgtcctgt ggcgcagccg cgccggccac
     7381 gagatcaagg ccgcggccct cgcaaccgca gggttgctgg cgacgcctta tctctacatg
     7441 tacgacctgg tcgtgctggc ggtgccgctg gcgttcctct gccgtctcgg tgcgcgcgga
     7501 ttcctgccgc atgagctgcc cgcgattggt gtcgcctgcc tgctgatatc tatctttccc
     7561 ttcatcaagg cgccgcttgg gttcggcgcc gtcgtcatcg tgggcgcact gatcgtccgc
     7621 cgcgtgttcg cgtcgcagag catcgcggca tgagcgcaca cgaagccgcc cccgctgctg
     7681 cgcagggcgt ggcggcgcgt cggccgacac cggagcgcct catatcgctc ctcggtttga
     7741 ctttggcgct cggctatctg gccgtgctgg tcaccgccgc gctcggcggc aacttcttgc
     7801 tcgacggcga agggcggccg atcgccaacg atttcgtcaa tgtgtgggcc gcgggacgcc
     7861 tcgccctcga cggcaatccc gctgccgcct acgactggac cctgcacaag gcggccgaag
     7921 tccgcgccgt cggccacgcc tttgcgaact actacggctg gcattacccg ccgccattcc
     7981 tgttcgtcgc taccgcgctc gcgacgctgc cttaccttgt cgcggctctc gtctggctcg
     8041 cggcaacgct caccgcctac gccgcgacgc ttggtggaat tctgcgaagc cgcgccggca
     8101 tcctcctcgc gctcggattt ccggctgcgc tctggaacgt gacggcgtgc cagaatgggt
     8161 tcttcaccgc ggcgctgatc ggcggcacgc tcgggctcct ggagcggcat ccggcgctag
     8221 ccggtctgtg cctgggattt ctgacctaca agccgcaatt cgggctgctg tttccgatcg
     8281 tactgatcgc tgaccggcgc tggctgacaa tcgcggttgc ggcgctcgct gcgggcggtc
     8341 tcgcggcggc atcctggctc gcgttcggcg gcgcctgctg ggaggccttc ctgcattgga
     8401 tgccgatcac cggccgcgtc gtgctcggcg agggcgccgc cgactggagc cgcctgcaaa
     8461 gcctgttcgg cctgatgcgc gcgcatggcg cgggcgaggc actcgcctgg accgtgcagt
     8521 ccgctggtag ttttgcggtg gcagccgcgc tcattctgct gtggcgcagc cgcgcctgct
     8581 acgagatcaa agccgccggc ctcgccgtcg gcgcgctgct cgcgacgcct tacatctata
     8641 tgtacgacct cgtcgtgctc gccgtcgcca tagcttttct gctgcgcctt ccattgcaac
     8701 gcggattttc cgctgccgac agcggcgctc ttgccgctgc cggcatcctc attctcgcgt
     8761 ttccctatgt gaagactcag gtcggcttgg cggccgttct catcgtcgcc gccttgatcg
     8821 tgaagcacac actcgccgac aagaaccggt cttcggcgaa aattgcagct cggcctactc
     8881 gatgagggga tcggcaatca cgcggcaaca atgccgtcct gctgctcgcc agccttgagc
     8941 aggtgcgcct gccgcttcgc ggtggcgagc tcgtacgcga gccgcgtccg gtcgccgttg
     9001 gcgcggtcga gcgcagcccg aagcttggcg ttctcggcct tggcgtgatt gtcgatctcc
     9061 gtgatgacag cgttgcgccg ctcggcctcg gttttgagcg cggcgtcgat ctctttgcgc
     9121 agctgcttgc gctcgcaatc gcttgcttcc aggagccgcg actgttcggc gaggcggttt
     9181 tccaggtccc gcgcccggcg ggcaagattc ttgtcttcgc tggtctgctc caccaattgc
     9241 tctacaagct cggcgacacg accatggaaa cttacaaatc tggcccgttc tcccatcact
     9301 ccctggatcg ccgcatcaag ttcgagctgc tcggcagcgc gtcggtcttc caccgcctgc
     9361 aattcgttgt tggctgcgtc gaggcgctct ttgatggcgc caacgtaagc cttgagtgca
     9421 acaagctcct tcgcctgtat atcggcgaac gttgagcgct cgttcaactc gccggtgagc
     9481 ctggcgagat ccgcttcctt ctcggacaac gcccgctcgg cgttctccgc cgcgacggtc
     9541 agcgcatagc ggtgatcctc cgccgcagtc agtgcgttgc aagcctcgtc gaggcgtccg
     9601 gtcagggtgc gaacctcggc cttgagaccg agcatctcat tcgtttgcgc ctcactccgc
     9661 gtcgagcgcg cgttcaactc gccgctgaac cttgcgagct ccgattcctt cgcggacagt
     9721 gaccgctcgg cgttttccgc cgcagcgatg agcgcatagt ggccatcctt cgccgcactc
     9781 agtgctttgc cagcctcgtc gaggcgtgcg gtcaaggtct caacctccgc cgtgagagac
     9841 acgatctcac tcgtctgcgc ctcgctgagc gtcgagtgca cgttcagctc gccgatgagc
     9901 ctcgcgactt ccgattcctt cgcggacagc gcccactcgg ctttctccgc cgcgctggtc
     9961 agcgcatggc gttgatcctc cgccgtattc agtgccttgg aagtctcgtc gaagcgtgct
    10021 gtgagagact caacttcggc cttcagaccg aggatttcgt tcgcctgcgc ctcgctcagc
    10081 gtcgagtgct cgttcaactc gccggcgagc ctggcgagat ccgactcctt cgccgacaac
    10141 gcccgctcag ctttctcgac cgcgacggtc agcgcatcgc ggccgtcatc cgcggtattc
    10201 agcgcctggg aagtctcgtc gaggcgtcct gtgatagact caacttccgc ctcgagactg
    10261 cggatctcgc tcgcctgcgc ctcgctcagc gtcgagcgct cgtccaactc ggcgatgagc
    10321 cgggcgatct ccgattcctt cgcgagcaac gcctgctcag cgtgccctgc cgcggcggcg
    10381 aatccctggc cgcgatcctc cgccgcattc aacgccgcgc aagcctcgtt caatcgtcct
    10441 gcaagcgtat cgacctcggc cttgataacg aatatctcgt tcgtctgggc ttggccgagc
    10501 atcgcgcgcg cgtccagctc gctcgtcagc cgggtgacct cagattccct cttggacaac
    10561 acccgctcgg cgttctccac cgctgcgctc aattcatggc cgcgatcttc tgcagccctc
    10621 aaggccttgt gggtctcgtc cagcctgcct gtcagcgcat cgacctcgcc cttgagagtg
    10681 aagatctcat tggcctgggc gtaagcaaac gccgcgcgct cgctcaactc gccgaccagc
    10741 tgggacgcgt ccaaatcctt ctcggacaac gcaagttcgg ctgttttgat tgctgccgtc
    10801 agctcattgc ggtgatcttc tcccgtcttc aactcgctgt tggccgtgtc aagccgcttt
    10861 ctcagcgtct cgatttcacc gtcgagcgtg acgatcctcg ccgtttgcgt ttcgctcagc
    10921 atcgtctgcg cattgaaatc gtccgacaac ttggccagct cggcttccct gtcggccaag
    10981 gtggcttcgg ccttttgcgc cgcgatggtc agtgcgtcga cgcgtgcctc gaattcgatc
    11041 tgctcggcat cccggcattt gtacacggcc tgcaattcgt tgttgttcgc ctccaaccgg
    11101 actttcagcg cttcgacctg ggtcttgagg gtaacgatct cgatcttctg accgtcggag
    11161 aggatcgact gctgctccag gtcgcacatc agcgtggcca gctccgacgc cctatccgcg
    11221 agggcgtgtt ccgccacctt gagcgcggcg gattcgctcg caagctgctc atcagtggtg
    11281 tgcaaccgct cgcgtagcgc gtcgagctcg atccggagat ggttgacggt gttgctgctc
    11341 ttcccgagtt ccagcaggtg gttagcgccc ttgcccttta gctgatcgac cttcatctct
    11401 agagttcgcg tcgacatggc gaactcggcc cgcagcagat ccttgtcggc tgcgatttcc
    11461 gccactgacg acggcatcgt gtccgcaagc tgccgggtgg tcagccggac ggcgcgggtg
    11521 tggacgatgg gcacgacggc cagaacgctg atcgacgcgg cgagaaaccc gatgccgaga
    11581 tacatgatgg attcgatcat caacgccatc acccactaaa cgcacgcgca acaaccgacc
    11641 tccgcggcag gcgcgccaag gacggcgcca accggccgac tgcgtcggtc tgctccaaat
    11701 tgcgtcttag ggattaaata ttgcgaaacc gtcaccagac cgcgcatggt taacggcagc
    11761 ccctatccga ctacccggac gggggaggca ctgcgaagct ttgctgattg cggcgaaaaa
    11821 ggaagggttt cgctctcctt agcccgtccc gcgaactcgg atcacgagga aggctggtga
    11881 cggctaattg gtcacgacca cgcgtccgcc gaccggcacg cgctgataca gatcgacgac
    11941 gtcgtcgttg accaggcgga tgcaaccaaa caccgcggga ttgccgat
//
LOCUS       DATMQB010000181         2190 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2847935, whole genome shotgun sequence.
ACCESSION   DATMQB010000181 DATMQB010000000
VERSION     DATMQB010000181.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2190)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2190)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2190
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2847935"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..756
                     /locus_tag="VNY79_05525"
     CDS             <1..756
                     /locus_tag="VNY79_05525"
                     /EC_number="1.1.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004450 - isocitrate dehydrogenase (NADP+)
                     activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0006102 - isocitrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HWX71940.1"
                     /translation="FLTFIGDDGKEIKREVFAFPGAGVAMSMYNLDASITDFARASMN
                     YALGRGYPLYLSTKNTIMKIYDGRFKDIFQEIYEKEFKAEFEKKNLFYEHRLIDDMVA
                     AALKWSGGYVWACKNYDGDVQSDTVAQGYGSLGLMTSVLTSPDGKIVEAEAAHGTVTR
                     HYREHQKGRETSTNSIASIFAWTRGLAHRAKLDANAALARFASTLEQVTVGTVEAGFM
                     TKDLALLIGPEQKWLTTTGFLDKVEENLRRATG"
     gene            856..1137
                     /locus_tag="VNY79_05530"
     CDS             856..1137
                     /locus_tag="VNY79_05530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011924873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71941.1"
                     /translation="MRYPDAMKKPSVLGTVAVAVVLLVILAAAAWYAAGAWISIQGPP
                     MPTAGYVAMALGVVFSLVIGCGLMALLFYSSRHGYDEPSQSDDDRAGER"
     gene            1394..1771
                     /locus_tag="VNY79_05535"
     CDS             1394..1771
                     /locus_tag="VNY79_05535"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71942.1"
                     /translation="MIPLRNHIRLGAAALITASAALAANTSFAVPRYDGVWSVSIFTT
                     RGDCIASYRYPMRIANGVLANGGDLAINVSGRVAPSGAIRVTLSHGDTRAAASGRLSA
                     SVGRGSWSGASCSGSWTAQRRSS"
     gene            complement(2012..>2190)
                     /locus_tag="VNY79_05540"
     CDS             complement(2012..>2190)
                     /locus_tag="VNY79_05540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA recombination/repair protein RecA"
                     /protein_id="HWX71943.1"
                     /translation="DSQRIGQGRENAKTFLKANPDIAGKIEAAIRQNAGLIAEKILAG
                     EEGAGDGDDDAAEG"
BASE COUNT          380 a          736 c          694 g          380 t
ORIGIN      
        1 tttctcacct tcatcggcga cgacggcaag gagatcaagc gcgaggtgtt cgcgtttccg
       61 ggcgccggcg tcgccatgtc gatgtataac ctcgacgcct cgatcaccga cttcgcgcgc
      121 gcgtcgatga actatgcgct cggccgcggc tatccgctct atctctcgac caagaacacc
      181 atcatgaaaa tctacgacgg acgcttcaag gacatcttcc aggagatcta cgagaaggag
      241 ttcaaggccg agttcgagaa gaagaacctg ttctacgagc accggctgat cgacgacatg
      301 gtggcggcgg cgctcaaatg gtccggcggc tatgtctggg cgtgcaagaa ctacgacggc
      361 gacgtgcagt cggacacggt ggcgcaaggc tacggctcgc tcgggctgat gacctcggtg
      421 ctgacctcgc cggacggcaa gatcgtcgag gccgaggccg cccacggcac ggtcacgcgg
      481 cattatcgcg agcaccagaa gggccgcgag acctcgacca actcgatcgc ctcgatcttc
      541 gcctggacgc gcggcctcgc gcaccgcgcc aagctcgacg ccaacgcggc gctggcgcgc
      601 ttcgcgtcga cgttggaaca ggtcaccgtc ggcacggtcg aagccggctt catgaccaag
      661 gatttggcgc tgctcatcgg cccggaacag aaatggctca ccaccaccgg ctttctcgac
      721 aaggtggagg agaatttgcg ccgggcgacg ggatgagaga cttcgccatt gccggcggcc
      781 aagcccggca atgacgcgga gggatcgcca cgcgccggcg cagtcgcccc ggccgctcaa
      841 accgatccga gcgccatgcg ttatccggac gcgatgaaga agcccagcgt tcttggaact
      901 gtcgcggtcg ccgtggtgct gctcgtcatc ctcgcggcgg cggcctggta cgccgccggc
      961 gcctggattt ccattcaggg cccgccgatg ccgacggcgg gctacgtcgc catggcgctc
     1021 ggcgtcgtat tctcgctcgt cattggctgc ggattgatgg cgctcctgtt ctattcgagc
     1081 cggcacggct acgacgaacc gtcgcaatcc gacgacgatc gcgccggcga acgttgatcc
     1141 acgggaggat gaccattcgg cgggcgtgcg accgcgccca cgcagacgaa ttcccggcag
     1201 aagatttccg atgaagctcg cggccccggc aattccgcgc agcgagtttg cggcaattta
     1261 gcgtcaaaca tcaacctgat ttgaactttt cgctcgtaga acaccgcgga atgccgggca
     1321 cgctactgag ccccggcatt cgtcacgttc aacaaacgca ccctcacccg ctcaagaaac
     1381 ttcgaggcat caagtgatac ctttgcgaaa ccatatccgg ctcggcgctg ccgcgctcat
     1441 caccgcctcc gccgcgttgg cggccaacac cagcttcgcc gtcccgcgct atgacggcgt
     1501 ctggagcgtg tcgatcttca ccacgcgggg tgactgcatc gccagctacc gttatcccat
     1561 gcgcatcgcc aacggcgtgc tcgccaacgg cggcgatctt gcgatcaacg tctccggccg
     1621 ggtcgcgccg agcggcgcca ttcgggtcac gctgagccac ggcgatacgc gcgccgcagc
     1681 ctccggccgc ctttccgcca gcgtcggccg cggctcgtgg agcggggcgt cctgttcggg
     1741 ctcgtggacc gcgcagcggc gcagttcata gatcaaattc ccgccccgtg cagggaaggg
     1801 tcaggacgcg gggcggtgag gcgcagattt tgacaattcc cctccccctt atggggaggg
     1861 gttaggggtg ggggtggtga ggccactcgc acgcgtcaac accagcgcgc gacctatcga
     1921 cccccctcct aaccctcccc cacagggggg aagggaaata gggcgctgcc aaacttgtgg
     1981 agcgtgcacg cgggcgcgtc ggcggatcgg ctcacccttc cgccgcgtcg tcgtcgccat
     2041 cgccggcgcc ttcctcgccg gcaagaatct tctcggcgat cagcccggcg ttctgccgga
     2101 tggccgcctc gatcttgccc gcgatatcgg gattggcctt gaggaaggtc ttggcgttct
     2161 cgcggccctg gccgatgcgc tggctgtcgt
//
LOCUS       DATMQB010000182         2642 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2535883, whole genome shotgun sequence.
ACCESSION   DATMQB010000182 DATMQB010000000
VERSION     DATMQB010000182.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2642)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2642)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2642
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2535883"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..202)
                     /locus_tag="VNY79_05545"
     CDS             complement(<1..202)
                     /locus_tag="VNY79_05545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline hydroxylase"
                     /protein_id="HWX71944.1"
                     /translation="MLLKAPQLRQFAEEGYLFLPRCFSEEEVAILRDEAEQIYATDRR
                     EVWREKTGAPRTAFAAHTYNEAF"
     gene            complement(597..728)
                     /locus_tag="VNY79_05550"
                     /pseudo
     CDS             complement(597..728)
                     /locus_tag="VNY79_05550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003502498.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
     gene            860..1819
                     /locus_tag="VNY79_05555"
     CDS             860..1819
                     /locus_tag="VNY79_05555"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HWX71945.1"
                     /translation="MPRNVAIGVGLIEFPFAGVAGFWRWVDLCEAGGIDSLWQTDRMI
                     SREPILECMSVMAALAGRTRRLKFGVNVLSLAFRDPVLLAKQCATIDVLSDGRLLPAF
                     GIGSPLAPEWRTLNLDTKTRGRKTDEGLEIIRRLWREDEVDFEGVHYHLSGASIAPKP
                     VQPDLPMWIGGSSEAAIRRTARIGTGWQAGGETPAQVAPVIAAIRAATAAEGRTIDDD
                     HYGAGIPFRFGRPDDPGLGRLFEAYRRRTGRDPQLHFAIGDASAIVERVAAYVDAGIS
                     KFILRPAARGDDEMLAQTRRLIEEVLPLVALRWPKPVKRRGAA"
     gene            1816..2520
                     /locus_tag="VNY79_05560"
     CDS             1816..2520
                     /locus_tag="VNY79_05560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015597174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018784 - (S)-2-haloacid dehalogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006805 - xenobiotic metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase type II"
                     /protein_id="HWX71946.1"
                     /translation="MTAGRLQGVRACVFDAYGTIFDVASAGERCTDALAGEAVRLTAL
                     WRDKQLQYSWLRAVQSRHADFWEVTGDALDFALETLGLTEPGLRERLMQLYLALDPFP
                     EVPEMLRRLRAAGLWTAILSNGSAEMLSAAVENAGLVGLFDHVLSVELVGVYKPHPKV
                     YRLACDRLSLDAGAILFISSNAWDVHAASAFGMRTVWCNRYGQRRERLPGRPGREIGS
                     LAELPPLIAHSGAHAG"
     gene            2566..2641
                     /locus_tag="VNY79_05565"
     tRNA            2566..2641
                     /locus_tag="VNY79_05565"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2600..2602,aa:Glu,seq:ttc)
BASE COUNT          402 a          852 c          931 g          457 t
ORIGIN      
        1 ggaaggcctc gttgtaggta tgcgcggcaa aggcggtgcg cggtgcgccg gttttctcgc
       61 gccacacttc ccgtcggtcg gtggcgtaaa tctgctcggc ctcgtcgcgc aggatcgcga
      121 cctcctcctc cgagaagcag cggggcagga acagatagcc ttcttcagcg aactgccgaa
      181 gctgcggtgc ctttagcagc atcgcgcttt cctccgattg agtaggacga ttggttcagc
      241 cggcgcgcgg tttcgccgcc ggcccggtcg gtgtggcggt gggctgcgcg ctcggccccc
      301 gtggcagacc agcttctgct gcttaagcaa ttgcagcgcg tgactaatcg gctggcgcga
      361 catgccgagc gcacggccca gctcttcctg gcagatgcgc tggccgcagg cgcggtcgat
      421 aagcgccgtg tgagggtcga gaggttgcag tgaggcactc gaaatttgaa ctcggaattc
      481 aaactacggg acgatatgcg cgtcgtcaaa cgccggaggg gcgctttgga tcgtgcgcgg
      541 tcgccgccac gccagcacgg ctgctagcgc gccggaccgt ctggggtatg cggtgccacg
      601 ccgccggcat gggcgagctc ggaggcggtc agcgcccggc catcgagcag tgccgtcagc
      661 atgttggcac gggcggggct gccgacgaag gcggcgattt cggaaaggga aggtgggttt
      721 gcggacatgc ggttatgatg gggggcccgc gctcgatgtc attgggcaac gcttcgaacc
      781 cgccgcagct ttcccgcggc gcgagaggtg taaaagccgc catcgagcta ggctggcgag
      841 atcgagcgag gaggtcagga tgccgaggaa tgtcgcgatc ggggtgggcc tgatagagtt
      901 cccgttcgcc ggcgtcgccg ggttctggcg ctgggtcgat ctgtgcgaag cgggcggcat
      961 cgattcactg tggcagaccg accgcatgat cagccgcgag ccgatcctcg aatgcatgag
     1021 cgtgatggca gccctcgccg ggcggacgcg tcggctcaaa ttcggcgtca acgtgctgtc
     1081 gctggcgttc cgcgaccccg tattgctggc caagcagtgt gcgactatcg acgtgctgtc
     1141 tgacgggcgt ctgttgccgg ctttcggcat cgggagtccg ctggcgccgg agtggcggac
     1201 gctcaatctc gacaccaaga cgcgcggccg caagaccgac gaggggcttg agatcatccg
     1261 ccggctatgg cgggaggacg aagtcgattt cgaaggcgtc cactatcacc tcagcggggc
     1321 ctcgatcgcg ccaaagccgg tccagcccga tttgccgatg tggatcggcg gctcgtccga
     1381 ggcggcgatc cgtcgcaccg cgcggatcgg caccggctgg caggccgggg gcgaaacccc
     1441 cgcgcaggtg gcgccggtga tcgccgccat tcgcgccgcc actgccgccg agggacgcac
     1501 gatcgacgac gaccactatg gcgccggcat cccgttccgc ttcggccgtc ctgacgaccc
     1561 gggccttggc cgtctcttcg aggcctaccg cagacgcacc gggcgcgacc ctcagcttca
     1621 tttcgcgatc ggcgacgcga gcgccatcgt cgagcgggta gccgcctatg tcgacgccgg
     1681 gatctctaaa ttcattctgc gtccggcggc gcgcggcgac gacgaaatgc tggcgcagac
     1741 gcgccggctg atcgaggagg tgttgccgct cgtcgccctg cgctggccga agccggtaaa
     1801 gcgccgcggt gcggcatgac ggccgggcgg ctgcagggcg tccgtgcctg cgtcttcgac
     1861 gcctatggca cgatcttcga cgtcgcctcg gctggcgagc gctgcaccga cgcgctcgcc
     1921 ggcgaggccg tccggctgac ggcactgtgg cgggacaagc agctgcaata ttcctggctg
     1981 cgcgcggtac agagccggca cgccgatttc tgggaggtga cgggcgacgc gcttgacttc
     2041 gcgctggaga ctctggggct gaccgaaccc ggactgcgcg agcggctgat gcagctttat
     2101 ctagcgctcg acccgttccc ggaagtgccg gaaatgctgc ggcgactgcg cgcggcaggg
     2161 ttgtggacgg cgatcctgtc gaacggctcg gccgaaatgc tcagcgctgc cgtcgagaac
     2221 gccgggctag tcggcctgtt tgatcacgtg ctgtcggtcg agttagtcgg ggtctacaag
     2281 ccgcacccca aggtctaccg tcttgcctgc gaccggctca gcctcgacgc gggcgctatc
     2341 ctcttcatat cctccaacgc ctgggacgtc cacgccgcct cggcgttcgg gatgaggact
     2401 gtctggtgca accgctacgg ccagaggcgc gaacgcctgc ccggccggcc cggccgtgag
     2461 attggctcgc tggccgaact gccgccgctc atcgcccaca gcggcgccca cgccggttga
     2521 tttcttcggc ccgccgctct agatgcaacg gtcggcagcg gctgcgtccc catcgtctag
     2581 aggcctagga catcgccctt tcacggcggt aacaggggtt cgaatcccct tggggacgcc
     2641 aa
//
LOCUS       DATMQB010000183        18127 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3156290, whole genome shotgun sequence.
ACCESSION   DATMQB010000183 DATMQB010000000
VERSION     DATMQB010000183.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 18127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18127
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3156290"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..992)
                     /locus_tag="VNY79_05570"
     CDS             complement(<1..992)
                     /locus_tag="VNY79_05570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HWX71947.1"
                     /translation="MAEPIKTDVLIIGAGPIGLFAVFELGLLDMKAHLVDILDKIGGQ
                     CAELYPEKPIYDIPGIPYTSAQGLVDALLQQIKPFNAQYHLNEMVETVEKIGDPLFLV
                     KTDQGKEFESKIVVIAAGGGSFQPKRPPIPGVEPYEGKSIFYAVRKMEAFRGKRVVIV
                     GGGDSALDWTLNLAPIASHLTLVHRRSEFRAAPDSVNKMMALVGEGKIDFVLGQVTSL
                     HGEGGQLSKALVKTNDGSSFDIACDAMLPFFGLTMKLGPVANWGFELKNNELITVNTE
                     SFETSTPGIFAIGDINWYPGKLKLILSGFHEAALMAQKAYRYVYPDKRLVFQYTT"
     gene            complement(1134..1454)
                     /locus_tag="VNY79_05575"
     CDS             complement(1134..1454)
                     /locus_tag="VNY79_05575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster-binding protein"
                     /protein_id="HWX71948.1"
                     /translation="MVKITYIDAAGAARTVEGEVGSTVMETAIKHGVPGIEAECGGAC
                     ACSTCHVYIEEDWRPKVGEPSPMEEDMLDFAYNVQPNSRLSCQIKVSEELDGLTVRTP
                     ERQA"
     gene            complement(1577..2002)
                     /locus_tag="VNY79_05580"
     CDS             complement(1577..2002)
                     /locus_tag="VNY79_05580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007602041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009927 - histidine phosphotransfer kinase
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Hpt domain-containing protein"
                     /protein_id="HWX71949.1"
                     /translation="MAVPHLTATAGPEPTQTVIDDDHLRQMTLGDRGLEREVLEIFVR
                     QAALMLRRISGAKPALAAAAAHTLKGSARGIGAWRVAQAADRLEQTAAVGDSLEAFKA
                     ALAELETASREARAAILARLADRSDGAGAEPPGRRVRDD"
     gene            2536..7104
                     /locus_tag="VNY79_05585"
     CDS             2536..7104
                     /locus_tag="VNY79_05585"
                     /inference="COORDINATES: protein motif:HMM:NF013600.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71950.1"
                     /translation="MANNPKMMDPTEAALSAIQEALNIKDSPVPLDSHLDGLDEPPLP
                     PERGRRTAAPAVPVYDEPYDPEPYDPRMEAHGLRAANDDQRSIGEVLQALQRRPAHTS
                     YIVAAVFSVAWVIGCVALSWAYLSDLSAALGPGHSPVAIMIGLGAGALLPIIFFFGVA
                     HMAWRSQELRLVAQAMANVAMRLAEPETVAHDSIVSVGQAIRREVAAMGDGVERALAR
                     ASELETLVQNEVAALERAYSDNEVRVRGLIKDLVNQRDTLVAQAEQVRSAISNVHIDL
                     TQDLSTISDLVGQQVNEAAQSITQSLAEKGEHITLALGRVGDNMVQQLSDRGGDLIER
                     LETASEETSRAIATASEQLTRSLNFKADHVTEEFAEIAGGLEDMMTARLDRVTEGFSE
                     KSLAILDMMSGRSQELTDSFTTRAQDLTENIIDTSSRLAETIATRADEVNSTLKASGE
                     SLILDLNLRGGDVVTKLEQTGNRITEEIVSRGSKVTDSFRDRAEHLAEVIAAGGDAVK
                     EMLATRLAAFEDMFNHSGAALGEKISRDSSTLGNLITRHLAEFDRTVKTYGSDLVERL
                     GARTQEITESLHSYVDSFDTRVTSKSTEVTTALQQRLGRFEEALDSRTQTLTEALSSR
                     VMDIAKTLTEGGKEIVTALDKRISDVTVVIDTRGAKLAETVGGRIADIDKALGTRAIE
                     VADTLDGRIAQLEELLVGRAEAVTEKLETRTRAAADLLNARLEELSTSIRTSSVDVEQ
                     TLAQLTARTTEMLGKNTAASVAATEVLNRSAAEATASLNQSAGALSGTIAKSAAAANE
                     TIGKTTATAADLVARSVVASREAIARTAGEAERSLSALSGEVTTALKQNVGNVERTLL
                     GTSAEIGRNLVTKADEINNAVVQRIGEMTRILDEKSSGLIAALSGKGQEFAGDVSRVT
                     DQAVKAIEAKSFVFTQTMMDNSQEIARLINEASQSATAAVTRSLGQLQDGTRGALDDA
                     KTTVSRTLDELHSTTKAAIEDSKQTASATVADMLETHGMLRSDTTALFERLREANILL
                     QEVLSGAHDNMSTIEHTMVTRVSEFVAAMNDVSGKAGATNARVEDQLGTFNAVTAKVL
                     NDLGELATQFNTHGRSLAEAVELLEHSNRKTADGVAQRQTSIETLVSTLDARTGDFEE
                     RLRRFSNLLEESLDSATTRAREIASIIAETSSESVRTIEQQFELVRTTSEEERKRTGE
                     TLNAVYDQAAAQVHGVFSQSATRFTEIVQGMKQMAGEMQQELEATRAEMRRGILELPQ
                     ETSDTAAQMRRVIVDQIEALAELNRIVARHGRSLDTSEPARREAEPMLAIGGGRAQVT
                     PPPPPRADLGPSPRADLAPPPPPAVRRDITGAPTRRSEPPPAGNNLMPVGKDGGNGRN
                     GGWLSDILTRASRDESPPIAPPGSRAQRDSVETLETLSVDIARMIDHDAAAELWDRYK
                     RGERNGLFSRRLYTAQGHKAFEEIRRKYRGDAEFRQTVEQYIHEFERLIDDVSRGERG
                     AAVARNYLTSDTGKVYTMLAHAAGRFEQ"
     gene            7293..8276
                     /locus_tag="VNY79_05590"
     CDS             7293..8276
                     /locus_tag="VNY79_05590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine dehydratase"
                     /protein_id="HWX71951.1"
                     /translation="MTASALLPTAADVDEAARRLAGVALHTPLLTSAVLDAMTGGRVF
                     LKAETLQRTGSFKFRGAYNRLAAIPPGERAGGVVAYSSGNHAQGVAAAARLLGMPCVI
                     VMPRDAPRAKRERTAALGAELVLYDREHDDREAIARELAAHRGAVLVPPYDDALIIAG
                     QGTAGREIVEDLKALGLTPDVVVVTASGGGLTAGIALAVRARVPSAALYTAEPQGFDD
                     HARSFRSGQRERNDTLTGTICDALMARMPGEITFAINRSLVGAGVVASDAEVAAAVAF
                     AFSELKLVVEPGGAVALAALMTGKVDVRGKVAVAVLSGGNIDPELFSRLVA"
     gene            complement(8369..8686)
                     /locus_tag="VNY79_05595"
     CDS             complement(8369..8686)
                     /locus_tag="VNY79_05595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71952.1"
                     /translation="MFVANGVSARDPDGRYANHPLKQWFDQLASGKGLCCSFADGFSV
                     QDVDWDTQDGRYRVRLQGEWVVVPDTALVSEPNRFGPAVVWPYFDANGATQIRCFMPG
                     AGA"
     gene            complement(8988..10658)
                     /locus_tag="VNY79_05600"
     CDS             complement(8988..10658)
                     /locus_tag="VNY79_05600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71953.1"
                     /translation="MANDPLPLPDISAGSPDDPHGGHDSHDAYDTPSAEDAQDAEYEA
                     IHAEIAATERGRWFLSEHVKRNRAADTDRLVDSLARAEAALRGGAVAAMPNPFADDLA
                     QFAAAIGQVEAVIAAGGAPAAGGLAASERIQEIVFALRERETDSVLCEALESALFDLG
                     EAFARHDAAAERAQSAAALLRGLQASISAMIALAAPSSAAERARVPEPGEPIWGMVSE
                     VQAGTVTPEAAAPASQPEESPSMESAAPDSAGGVLRASEGIEPLALENKQASEGASVA
                     YREWETHAAPEAEMPAREIEPPHDEHVEHIDGSQEPANEPLASEEILLRSMSGEVVSG
                     EEPSRAPLRSEEAASEQQLLSEEEPREVAASSEASEEPSVAMKLPMHAVTEPAERPPE
                     LRAEATDLAVGRPADDENAGTAARSHDTAAQFADDAVETVLSAADDIESLLETEPADS
                     PPTAVPPTSPQDDLDDLFEPLPLEHEGRPAAASTATPESARQMFSRGLPPPAFSSPVT
                     QTAASPVQRAPLAAAPAPVAREIPRPAPKDPLAAVRALSEEELIALFS"
     gene            complement(10833..11813)
                     /gene="dgcA"
                     /locus_tag="VNY79_05605"
     CDS             complement(10833..11813)
                     /gene="dgcA"
                     /locus_tag="VNY79_05605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016855 - racemase and epimerase activity,
                     acting on amino acids and derivatives [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-D-Glu racemase DgcA"
                     /protein_id="HWX71954.1"
                     /translation="MELSVRIERWPLAGAFTISRGSKTEAVVVVAELSDGTHRGRGES
                     VPYARYGETADGIVAAIEAVRPALQQGLDRPALQQAMRSGAARNALDCAYWDVNAKAA
                     GRRAHELAGLGPTAPLITAYTISLGTPAAMAEAAERAALRPLLKVKLGGGDDDRTRIA
                     AVRRAAPLAEIIVDVNEGWRADDLARNLAACADAGVTLVEQPLPEGGDEVLARIKRTI
                     PVCADESVHDRASLDALAGKYDAINVKLDKAGGLTEALALAGAAEQRGLAVMVGCMVA
                     TSLAMAPAMLVAQRARVVDLDGPLLLAKDRPEGLRYDGSLVYPPEPALWG"
     gene            11894..13030
                     /locus_tag="VNY79_05610"
     CDS             11894..13030
                     /locus_tag="VNY79_05610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaE family lipid ABC transporter permease
                     subunit"
                     /protein_id="HWX71955.1"
                     /translation="MTAAAITGRVEGDRVALAATGAWTADAAVALESIVEETARHYQA
                     ARRIDIDLARLERLDTFGAWLIERLTRTLAERGSSARIVGLSDADRGLIEEVRLVNRA
                     PARPRRRADNPALAMLDAIGRAVADIGGSLVLLAQLFGALTMAIAGTIARPARLRLTS
                     TVHHLERVGWRAVPIILLSTFLIGAIIAQQGIFHFRTFGAEVFVVDMVGILVLREVGV
                     LIVCVMVAGRSGSAYTAELGAMKMREEIDALRTMGLDPVEVLVLPRIVALVIAVPLLT
                     FLGSMAALYGAGLVCWLYGGMTPEIFLERLRQAIWMPTFAVGMIKAPFMALTIGLVAC
                     VEGFNVEGSAASLGRKTTASVVKSIFLVIVLDGFFAMFFGAIGM"
     gene            13033..13797
                     /locus_tag="VNY79_05615"
     CDS             13033..13797
                     /locus_tag="VNY79_05615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX71956.1"
                     /translation="MTGNEAVISVRDLVVSFGAATVLDRVTLDVFRGEILGFVGGSGA
                     GKSVLMRTIIGLLPKRAGTIEVFGSDLASLDGRERRAVERRWGVLFQQGALFSSLTVR
                     QNVQFPMREHLDLSPRFIDEIALAKLEMVGLDPAVAEKFPAELSGGMIKRVALARALA
                     LDPDIVFLDEPTSGLDPVGAAAFDELIRTLQRTLGLSVFMVTHDLDSLHAVCDRIAVL
                     VDGRVIAAGPIEAMLASEHQWLKSYFRGKRGRQVYH"
     gene            13877..14701
                     /locus_tag="VNY79_05620"
     CDS             13877..14701
                     /locus_tag="VNY79_05620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018391372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MlaD family protein"
                     /protein_id="HWX71957.1"
                     /translation="METRANYVVTGAFTLAVIAGVFSFIFWFHNSGSGGERASYRVVF
                     TGSVSGLRSGGSVLFNGIRVGEVSGLALDANDPRKVVATISVDRAVPVRADTRVALAF
                     QGLTGLAEVALTGGAADAALLASDDGTPPTLYAAAGAGADVTQAARDVLSRISGLVVD
                     NETALRSSLRNIETVTSTLAQNSERLDKVMAGLENLTGSGDKSGEIAQAAEAVRKLAE
                     NLDKRTDEISVGLTRFSNSGLKEFEAFAVDGRRTLAELNKAIKNIDQHPSRLIFGQ"
     gene            complement(14890..15708)
                     /locus_tag="VNY79_05625"
     CDS             complement(14890..15708)
                     /locus_tag="VNY79_05625"
                     /EC_number="3.6.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-2,3-diacylglucosamine diphosphatase"
                     /protein_id="HWX71958.1"
                     /translation="MAVEHGTRLFRTLFISDVHLGARGCQAKSLLDFLRYHDAETIYL
                     VGDIVDGWQLRAGWYWPQPHNDVVQKLLRKARKGARMIYLPGNHDEFLRDYYGTHFGG
                     IEVKETAIHEGADGRRYLVVHGDVFDLVVKHARWLALAGDKAYDLAIFVNRYFNALRR
                     RLGFSYWSLSQWAKHKVKNAVNYIGAFEQTLAAEANRRRVDGVICGHIHHAAIHEKFG
                     IRYINCGDWVESCTAIAEHADGRFEIITWAETDAVRPLLPPPEFRLEEEREIAA"
     gene            15880..16530
                     /locus_tag="VNY79_05630"
                     /pseudo
     CDS             15880..16530
                     /locus_tag="VNY79_05630"
                     /inference="COORDINATES: protein motif:HMM:NF025025.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
     gene            16749..17099
                     /locus_tag="VNY79_05635"
     CDS             16749..17099
                     /locus_tag="VNY79_05635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71959.1"
                     /translation="MLPMIALACIAPAVGLPPLLSVAALAAAWYGREMLLAAAAGWHL
                     PALYPLFGLARDLLLPFLFVGALHGDDFVWRGNEMQVERMRPRGMMALVRPRLNEIAP
                     VARRRLRALRARMS"
     gene            complement(17135..>18127)
                     /locus_tag="VNY79_05640"
     CDS             complement(17135..>18127)
                     /locus_tag="VNY79_05640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HWX71960.1"
                     /translation="IIERQPVEVTTLRQDVETFGRKARVAFGRDWRADAERRDFTINA
                     LSASADGMVYDYVGGLADIAMRRVRFIGDAQKRIEEDYLRILRFFRFHAYFGEGAPDA
                     AGLLACIRARAGLERLSRERVRMEVLKLLLAPHAAPTLAVMTEAGLLGGVLGGVPLLA
                     SFENVAKIEAACGMAPDAVRRLGGLAVLVKEDAERLAQRLRLANAETERLIALEAWWR
                     VAPAAREQAARALLYRLGPQSFADRVLVAWARSPAGTADAAWRELASLPQRWTFPVFP
                     LKAADFIRRGLGQGPALGAAMRAAEAAWIAADFPLERAALDAIADEAAQAGRAH"
BASE COUNT         2977 a         6286 c         5960 g         2904 t
ORIGIN      
        1 gtggtgtatt ggaacaccag gcgcttgtcc ggatagacgt agcgatacgc cttctgcgcc
       61 atcagcgccg cctcgtggaa tccggaaagg atcagcttga gcttgccggg ataccagttg
      121 atgtcgccga tcgcgaaaat gccgggcgtg ctggtctcaa agctttcggt gttgaccgtg
      181 atcaactcgt tgttcttcag ctcaaaaccc cagttcgcga ccggaccgag cttcatggtc
      241 agtccgaaga acggcagcat cgcatcgcag gcgatgtcga acgaggagcc gtcgttggtc
      301 ttcaccagcg ccttgctgag ctgaccgccc tcgccatgca gcgatgtcac ctggccaagc
      361 acgaagtcga tcttcccctc gccgacgagc gccatcatct tgttgacgct gtcgggcgcg
      421 gcgcggaatt cgctgcgccg gtgcacgagc gtgaggtggc tggcgattgg cgcgagattg
      481 agcgtccagt ccagtgcgct gtcgccgccg ccgacgatca ccacgcgctt gccgcggaac
      541 gcctccatct tgcgcaccgc atagaatatc gacttgcctt cgtacggctc gactccgggg
      601 atcggcggcc gcttcggctg gaacgagccg ccgccggcgg caatgacgac gatcttgctc
      661 tcgaattcct tgccctggtc ggtcttcacc aggaacaggg gatcgccgat cttctcgacc
      721 gtctccacca tctcgttgag atggtactgc gcattgaacg gcttgatctg ctgcagcagc
      781 gcatcgacca ggccctgcgc gctggtatag ggaatgccgg gaatgtcgta gatcggcttc
      841 tccgggtaaa gctcggcaca ctggccgccg atcttgtcga gaatgtcgac gagatgcgcc
      901 ttcatatcga gcagccccaa ctcgaacacc gcgaacagcc cgatggggcc cgcgccaatg
      961 atgagaacgt cggtcttgat aggttcggcc atgtctgatc cgtatactcg tcgctgatgg
     1021 actctttgct gctgagttgg cgagtgtcta gcgtgctcgc cgcggcaggg gaagaggcgt
     1081 tgcgatgagt gttccgcggc ggatttgttc cagccggatt ggatttgtgc cagctaggct
     1141 tgccgctcgg gcgtcctcac ggtgagcccg tcaagctcct cgctcacctt gatctggcac
     1201 gacagccggg aattcggctg cacattatag gcgaagtcga gcatgtcctc ttccatcggt
     1261 gacggctcgc cgactttcgg gcgccagtcc tcttcgatgt acacgtgaca ggtcgagcag
     1321 gcacaggcgc cgccgcactc cgcctcgatc ccgggcacgc catgcttgat cgccgtctcc
     1381 atcaccgtcg agccgacttc gccttcgacc gtgcgggccg cgcccgcggc gtcgatgtag
     1441 gtgattttga ccatgactga aatcgcgaag cggggctgac gggagcgcgg cggacggcgc
     1501 cataaatcgc cggcgtggcg gcggcctctt ctatcgactt gggttgcggg gcgccagggg
     1561 aagcgtgcgg acgggatcaa tcgtcgcgca cgcgccgacc gggcggctcg gcgccggcgc
     1621 cgtcagaacg atcggccaga cgcgcgagga tcgctgcgcg cgcctcgcgg cttgcggtct
     1681 cgagttccgc gagcgccgcc ttgaaagcct ccaagctgtc gccgacggca gcggtctgct
     1741 ccaaccggtc ggcggcttgc gccacgcgcc acgcgccgat cccacgcgcc gaacctttga
     1801 gagtgtgggc cgcggccgcg gccagcgccg gcttcgcgcc ggagatgcgc cgcagcatca
     1861 aggcggcctg gcgtacgaag atctcaagca cttctcgttc gaggccgcga tcgccaagcg
     1921 tcatctgccg caggtggtcg tcatcgatga cggtttgcgt cggctcagga ccggccgtcg
     1981 ccgttaggtg cggtacggcc atggaccttc tccccgacag ccctcgccgg aacggcagcg
     2041 cgcgcgcccg ccggcaaaac ccgcgtaacc gttgctgtgg ccagaaaatt cgagggccct
     2101 tctcgcacgt cgacggtaac gacaagctta accgcatcgg gctcggcgcc tcgggcgcca
     2161 ccgggccgct tcgcgcaggt caggcagtcg gggcggagct ttccacaggc gcggagaaaa
     2221 agagcaccgc gcgttcgctc ggggcgtgtt tcgccgcaag ccggcccaat tgctggccac
     2281 acaatgacgg gttgatctct ggcgaacgcc ggatgaaact atggtgacca aaccgttaac
     2341 gatgattaaa gggacgttac caaaacccgt ttccttcgat ccgccaaacc gataggatgg
     2401 gcaacggcag cacgatatga gggcgggggg cccttggtgc cggatgacaa attgaacgat
     2461 caacgcgctc gtggcgcggc ctgagcaccc caggccgtcc tggtccagcg taaacacgcg
     2521 aggcgacgac cgaaaatggc caacaatccg aagatgatgg acccgaccga agcggcactg
     2581 tcggcgatcc aggaagcatt gaacatcaaa gatagtccgg tcccgctgga cagccatttg
     2641 gacggcctcg atgagccgcc gcttccgccc gagcggggca ggcgcactgc ggcgccggcg
     2701 gttcccgtat acgacgagcc gtatgacccc gagccgtacg acccgcgcat ggaggcgcac
     2761 ggcctgcgcg ccgccaacga cgatcagcgc tcgatcggcg aggtgctgca ggcgctgcag
     2821 cgtcgccccg cgcatacgtc ctacatcgtt gctgccgtct tctccgtcgc ctgggtgatc
     2881 ggctgcgttg cgctctcctg ggcctatctg tcggacctca gcgcggcgct cggacccggc
     2941 cattctcccg tagccatcat gatcggcctc ggcgccggcg cgctgctgcc gatcatcttc
     3001 ttcttcggcg tggcccacat ggcctggcgc tcgcaggaat tgcgcctggt cgcacaggcg
     3061 atggccaacg tcgccatgcg gctcgccgag ccggagaccg tggcgcacga ctcgatcgtg
     3121 agcgtcggtc aggcgatacg ccgcgaggtc gcggccatgg gcgacggcgt cgagcgcgca
     3181 ctcgcgcgcg cgagcgaact cgaaacgctg gtgcagaacg aagtcgccgc gctcgaacgc
     3241 gcctacagcg acaacgaggt ccgcgtccgc gggctgatca aggatctcgt caaccagcgc
     3301 gacactctcg tcgcccaggc cgagcaggtg cgctccgcca tcagcaacgt ccacatcgat
     3361 ctgacgcagg acctgtccac gatcagtgat ctcgtcggcc agcaggtcaa cgaggcggcg
     3421 cagagcatca cccagtcgct cgccgagaag ggcgagcaca tcacgctggc gctcggacgc
     3481 gtcggcgaca acatggtgca gcagttgagc gaccgcggcg gcgatttgat cgagcgcctg
     3541 gagaccgcaa gcgaggagac ctcgcgcgcg atcgccacag ccagcgaaca gctcacccgc
     3601 agcctcaatt tcaaggccga ccacgtcacc gaggagttcg ccgagatcgc cggcggcctg
     3661 gaagacatga tgacggcgcg gctcgatcgc gtcaccgaag gcttctcgga aaaatcgctg
     3721 gcgatcctcg acatgatgag cggccgttcg caggagctaa ccgacagctt caccacgcgg
     3781 gcgcaggacc tcaccgagaa catcatcgac acgtcgagcc gcctcgccga gacgatcgcc
     3841 acgcgggccg acgaggtcaa cagcacgctg aaggcgtccg gcgagtcgct catcctcgac
     3901 ctcaatctgc gcggcggcga cgtcgtcacc aagctcgagc agaccggcaa ccgcatcacc
     3961 gaggagatcg tctcccgcgg cagcaaggtc acggattcgt tccgcgaccg cgccgagcac
     4021 ctcgccgagg tcatcgccgc cggcggcgat gcggtgaagg agatgctggc gacgcggctc
     4081 gccgcgttcg aggacatgtt caaccattcc ggcgccgcgc tcggcgaaaa gatctcgcgg
     4141 gattcctcga cgcttggcaa cctcatcacc cgccacctcg ccgaattcga ccggacggtg
     4201 aagacctacg gctccgatct cgtcgaacgg ctcggcgcgc gcacccagga aatcaccgaa
     4261 tcgctgcaca gctacgtcga cagcttcgac acccgcgtca cctcgaagtc gaccgaggtc
     4321 accaccgcgc tgcagcagcg gctcgggcgc ttcgaagagg cgctcgacag ccgtacccag
     4381 acgctcaccg aggcgctgtc cagccgggtc atggacatcg ccaagacgct caccgaaggc
     4441 ggcaaggaaa tcgtcaccgc gctcgacaag cgcatcagcg atgtcaccgt ggtgatcgac
     4501 acgcgcggag caaagctcgc cgagaccgtc ggcggccgca tcgccgacat cgacaaggcg
     4561 ctgggcacgc gcgccatcga ggtcgccgac acgctcgacg gccgcattgc gcaactcgag
     4621 gagcttctgg tcgggcgcgc cgaagcggtg acggaaaagc tggagacgcg cacccgcgcc
     4681 gccgccgacc tgctcaacgc ccggctcgag gagctttcca cctcgatccg caccagctcc
     4741 gtggatgtcg agcagacgct cgcccagctt actgccagga cgacggaaat gctgggcaag
     4801 aatacggcgg cgagcgtcgc ggcaacggag gtgctcaacc gcagcgccgc cgaggcgacc
     4861 gcctcgctca atcaaagcgc gggcgcgctg agcggcacca tcgccaagag cgctgccgcc
     4921 gccaatgaga ccatcggcaa gaccacggcg accgccgccg atctcgtcgc caggagcgtc
     4981 gtcgcctcgc gcgaggcgat cgcgcgcacg gcgggcgagg ccgagcgttc gctgtcggcg
     5041 ctctcgggcg aggtgaccac cgcactcaag cagaacgtcg gcaatgtcga acgcaccctg
     5101 ctcggcacca gcgccgagat cgggcgcaat ctggtcacca aggccgacga gatcaacaat
     5161 gcggtggtgc agcgcatcgg cgagatgacc cgcatcctcg atgagaagtc gagcgggctg
     5221 atcgcggcat tgtccggcaa gggccaggaa ttcgccggcg acgtgagccg ggtcaccgac
     5281 caggcggtga aggccatcga ggccaagagc ttcgtcttca ctcagacgat gatggacaac
     5341 agccaggaga tcgcccgcct catcaacgag gcgagccaga gcgccaccgc agcggtgacg
     5401 cgctcgctcg ggcaattgca ggatggcact cgcggcgccc tcgacgacgc caagaccacg
     5461 gtctcgcgca cgctcgacga gctgcacagc accaccaagg cggcgatcga ggactcgaag
     5521 cagaccgcct ccgccaccgt cgccgacatg ctggaaacgc acggcatgct gcgctccgat
     5581 accactgcgc tgttcgagcg cctgcgcgag gccaacatcc tgctgcagga ggtgctcagc
     5641 ggcgcccacg acaacatgag caccatcgag cacacgatgg tgacgcgcgt ttccgaattc
     5701 gtcgccgcca tgaacgacgt gagcggcaag gccggcgcca ccaacgcccg cgtcgaggac
     5761 cagctgggca ctttcaacgc cgtgaccgcc aaggtgctca atgacctcgg cgagctcgcc
     5821 acgcagttca acacgcacgg ccgttcgctc gccgaggcgg tggagctgct cgaacacagc
     5881 aaccgcaaga ccgcggacgg cgttgcgcag cggcagacca gcatcgagac gctcgtttcg
     5941 acgctcgatg cgcgcaccgg cgatttcgag gagcgcttgc ggcgtttctc caacctgctc
     6001 gaggagtcgc tcgattcagc gacgacgcgg gcgcgcgaga tcgccagcat catcgccgag
     6061 acgagcagcg agagcgtgcg caccatcgag cagcagttcg agctggtgcg cacgacctcc
     6121 gaggaggagc gcaagcgcac cggtgaaaca ctcaatgcgg tctatgacca ggccgctgca
     6181 caggtgcacg gcgtgttcag ccagtccgcc acccgcttca ccgagatcgt gcaaggcatg
     6241 aagcagatgg ccggcgaaat gcagcaggag ctggaggcga cgcgcgccga gatgcgccgc
     6301 ggcattctcg agctgccgca ggagacttcc gacacggcgg cgcagatgcg ccgcgtcatc
     6361 gtcgatcaga tcgaggctct cgccgagctt aaccgcatcg tcgcccgcca cggccgcagt
     6421 ctcgacacct ccgagccggc ccggcgcgag gccgagccga tgctcgccat cggcggcgga
     6481 cgcgcccaag tgacgccgcc accgccgccg cgcgccgatc tcggcccgtc gccgcgcgcc
     6541 gatctcgccc cgccgccgcc tccggccgtg cgtcgcgaca tcaccggcgc gccgacgcgc
     6601 cggagcgagc cgccgcccgc gggcaacaac ctcatgccgg tcggcaagga cggcggcaat
     6661 ggccgcaatg gcggctggct cagcgatatt ctgacgcgcg cgtcgcgcga cgagagcccg
     6721 ccgatcgctc cgcccgggtc gcgcgcgcag cgcgacagcg tcgagacgct cgagacgctt
     6781 tcggtcgaca tcgcccgcat gatcgaccac gacgccgccg ccgaactgtg ggaccggtac
     6841 aagcgcggcg agcgcaacgg cttgttcagc cggcgtctct acaccgccca ggggcataag
     6901 gcgttcgagg aaatccgccg caagtaccgc ggcgatgccg agttccggca gaccgtggag
     6961 caatacatcc acgagttcga gcggctgatc gacgatgtgt cgcgtggcga acgcggcgca
     7021 gcggtggcgc gcaactatct cacgtccgac accggcaagg tttacaccat gctggcgcac
     7081 gccgcgggac ggttcgagca atagacgcgt tcggcgcgcg gagcgggcgc cgtggcaccg
     7141 tccgtcggct ttttgccgca acggccggcg cacggcacat agcccagcgt cgcgcgcggc
     7201 ctgcgcgcgt ggttgaatag cgcccggaac cggtcggatt cgggcgccgg cggccttgcc
     7261 cctgccgtca tcgcggcgct acccttcgcg gaatgacagc ttcggctttg ttgcctactg
     7321 ccgccgatgt cgatgaggcg gcgcggcggc ttgcgggtgt tgccctgcac acgccgctgc
     7381 tcacctcggc cgtgctcgac gccatgaccg gcgggcgcgt ttttctcaag gcggagacgc
     7441 tgcagcgcac gggctcgttc aagtttcgcg gcgcgtacaa caggctcgcg gcgatcccgc
     7501 ccggcgagcg cgccggcggc gtcgtggcgt attcctcggg caaccacgcg cagggcgtcg
     7561 ccgcggcggc gcgcctcctc ggcatgccct gcgtgatcgt catgccgcgc gacgcgccgc
     7621 gcgccaagcg cgagcgcacc gcggcactcg gcgccgagct cgtgctctac gatcgcgagc
     7681 acgacgatcg cgaggcgatc gcgcgcgagc ttgcggcgca ccgcggcgcg gtgctcgtgc
     7741 cgccctacga cgatgcgctg atcatcgctg ggcagggcac cgccgggcgg gagatcgtcg
     7801 aggatttgaa ggcgctcggc ctcacgccgg acgtcgtggt ggtgaccgca tccggcggcg
     7861 ggctcaccgc cggcattgcg cttgcggtca gggcgcgggt gccgtcggcc gccctctata
     7921 ccgccgagcc gcagggcttc gacgaccacg cgcgctcgtt ccgcagcggc cagcgcgagc
     7981 gcaacgacac cctcaccggc acgatctgcg acgcgctgat ggcgcgcatg ccgggcgaga
     8041 tcacatttgc gatcaatcgc tcgctggtcg gagcgggcgt cgttgccagc gatgccgagg
     8101 tcgcggctgc ggtggccttc gccttttccg aactaaagct cgtggtcgag ccgggcggcg
     8161 ccgtggcgct cgccgcgctg atgaccggca aggtcgacgt gcgcggcaag gtcgccgtcg
     8221 ccgtcctctc cggcggcaat atcgatcccg agctcttctc tcgcctggtc gcgtagagcg
     8281 gactcgatca gcccgccccc agaaccggaa cggcaatccg tccttacctg aaattcccac
     8341 tccggcgcgc gaccaagcgg aacagatcct acgcgccggc gcccggcatg aagcaacgga
     8401 tctgcgttgc tccgttcgcg tcgaaatacg gccacaccac cgcaggaccg aagcggttcg
     8461 gctcgctcac gagcgccgtg tcgggcacga caacccactc gccttgcagt cgcacccgat
     8521 agcggccgtc ctgcgtatcc caatcgacat cctgcacgct gaagccgtcg gcgaacgagc
     8581 agcacaagcc cttcccgctt gcgagctgat cgaaccattg cttgagcgga tgattggcgt
     8641 agcggccatc aggatcgcgc gccgaaacgc cgttcgcaac gaacattgtc atgcacaacg
     8701 ctacggcagc cactgttgga ccggtgagtc tgtgcatcgt ggcctccaga gttcgtgttg
     8761 tgcggaccaa cgcgacgtga tccggcagac ctggagaatg caacgccttc cggctgcgcc
     8821 gttgttgctg atccgcatcg actcctgaaa agcaacttcc gtgccgcgtc acccgaatca
     8881 ccacgggaga cttctctttg ttaacaaaat gcgacgggac ggtgtagcgc gtccgctgcg
     8941 gcgcgcacga ccgcgagcgt ttggtgggtg cgatggtacc ggcgcgttta gctgaacagc
     9001 gcgatcagct cttcctcgct gagagcgcgc accgcggcga gcggatcctt tggcgctggg
     9061 cgtgggatct cccgcgccac cggcgccggc gcggcggcaa gcggcgcacg ctggaccggc
     9121 gatgccgcgg tctgtgttac cggcgaggaa aacgcaggcg gcggcagtcc gcgagaaaac
     9181 atctgccgcg cggattcggg cgtcgcagtg ctcgctgccg ccggacgccc ttcgtgttcc
     9241 agcggcagcg gctcgaacaa atcgtcgaga tcgtcttgcg gacttgtcgg cggcacggcc
     9301 gtcggcggcg aatcggcggg ctcggtctca agcagcgatt cgatgtcgtc ggcggcagac
     9361 aagaccgttt caacagcatc gtccgcgaat tgcgcagcgg tatcgtgcga tcgcgcggcg
     9421 gtgcctgcgt tctcatcatc cgcaggacga cccacggcca ggtccgtagc ctcggcgcga
     9481 agctccggtg gccgctcggc cggctcggtc acggcgtgca tgggaagttt catcgcaacg
     9541 gatggctctt cgctcgcctc gctgcttgcc gccacttcgc gcggctcttc ttcgctcagc
     9601 agttgctgct cgctcgctgc ctcttcgctg cgcaacggcg cgcgcgatgg ttcctcaccc
     9661 gaaaccacct caccggacat acttctgagc aaaatctctt cgctcgccag cggttcgttc
     9721 gcaggctcct gggagccgtc gatgtgttcc acgtgctcgt cgtgcggcgg ctcgatctcg
     9781 cgcgctggca tctcggcttc cggcgccgcg tgcgtctccc attcgcggta cgcgaccgag
     9841 gcaccctccg acgcctgttt gttttcgagt gccagcggct cgattccttc gctcgcacgc
     9901 agaactccgc cagcggaatc cggcgccgcg gactccatcg acggagattc ctccggttgg
     9961 ctcgccggcg ccgccgcttc gggcgtcacg gtgcctgctt gaacttcact caccatcccc
    10021 caaatcggct cgcccggttc gggtactctc gcgcgttccg cggctgaact tggtgccgcg
    10081 agcgcgatca tggcgctgat gctcgcctgg agaccgcgca gcaacgcggc cgcgctctgc
    10141 gcgcgctcag ccgcggcgtc atgccgcgcg aacgcttcgc cgaggtcgaa cagggcgctt
    10201 tccagcgcct cgcacaacac cgagtcggtc tcgcgttcgc ggagcgcaaa aacgatctcc
    10261 tggatgcgct cgcttgcggc aagaccgccg gccgcgggcg cgccgcccgc cgcgatcacc
    10321 gcctcgacct gtccgatcgc cgccgcgaac tgggcaagat cgtcggcgaa cgggttgggc
    10381 atcgccgcaa ccgcaccgcc gcgcagcgcc gcttcggcac gcgccagcga atcgacaagc
    10441 cgatccgtgt ccgctgcacg attgcgcttg acgtgctcgc tcaggaacca gcggccgcgc
    10501 tcggtcgcag cgatctccgc gtggatcgcc tcgtactccg catcctgggc gtcttccgca
    10561 ctcggcgtgt cgtaggcgtc gtgcgagtca tgcccaccat gcgggtcgtc cggcgatccg
    10621 gccgaaatgt ccggcaacgg cagaggatcg ttggccatcg caacacctga tgcggcacga
    10681 ttcagtcagc acacccgccg cgcgcacgca atgctattgc cggcttatcc cgaggtttgc
    10741 ggacgcggcg caaacgtcgt tgcggcgggc atggcgacca agccatcacg cccctcccct
    10801 tgccatgcgc ggcatcagcg acccgacttg cgtcagcccc acagcgctgg ttcgggcgga
    10861 taaacgaggc tgccgtcgta acgcaggccc tccgggcggt ccttggcgag aaggagcggg
    10921 ccgtcgagat cgaccacgcg cgcacgctgc gccaccagca tcgccggcgc catcgccagc
    10981 gaggtcgcca ccatgcagcc gaccatcacg gccaggccgc gctgttcggc ggcgccggca
    11041 agcgccaatg cctcggtgag gccgccggcc ttgtcgagtt tgacgttgat ggcgtcgtac
    11101 ttgccggcga gcgcgtcgag cgaagcgcgg tcgtgcacgc tctcgtcggc gcacaccggg
    11161 atcgtgcgct tgatgcgcgc aagcacctcg tcgccgccct cgggcaaagg ctgctcgacc
    11221 agcgtgacac cggcgtcggc gcaggcggca aggttccgcg cgagatcgtc cgcgcgccac
    11281 ccctcgttca cgtcgacgat gatttccgcg agcggcgccg cgcggcgcac ggcggcgatg
    11341 cgcgtccggt cgtcgtcgcc gccgccgagc ttcaccttga gcaacggccg caacgccgcc
    11401 cgctccgccg cctcggccat cgccgccgga gtgccgagcg agatcgtgta agccgtgatc
    11461 agcggcgcag tcgggccaag cccggcgagc tcgtgtgcac ggcggcccgc ggccttggcg
    11521 ttaacgtccc agtaagcaca atcgagtgca ttacgggcgg cgccagagcg catggcttgc
    11581 tgcagggcgg gccggtcaag cccctgctgc agcgcggggc gcacggcctc gatggctgcc
    11641 acaatgccgt ccgcagtttc accgtagcgt gcgtagggga cggactcgcc acggccgcgg
    11701 tgggtcccat cgctcagttc ggccaccacc acgaccgcct cggtcttgct gccgcggcta
    11761 atcgtgaacg cgccagccag cggccagcgc tcgattcgta cggagagctc catgcgagcg
    11821 gcactatgac cggggacgtc cggcgggctc aagggtcgcc agcggcgtcg cggttcgctg
    11881 ggagcgccgt gccttgaccg ccgctgcgat caccggccgg gtcgagggcg accgcgtggc
    11941 ccttgccgcc accggcgcct ggacggccga cgccgcggtc gcgctcgaat cgatcgttga
    12001 ggagaccgcg cgccactacc aggccgcccg caggatcgac atcgatctcg ccaggctcga
    12061 acggctcgac acgttcggcg cctggctgat cgagcgcctc acgcgcacgc tcgccgagcg
    12121 tggctcatcc gcgcgcatcg tcggcctctc ggacgccgac cggggcctca tcgaggaggt
    12181 gcggctggtc aaccgggccc cggcgcgccc ccgccgccgc gccgacaatc ccgcgctagc
    12241 catgctcgat gcgatcgggc gggccgtggc cgatatcggc gggtcactcg tgctgctcgc
    12301 ccaactcttc ggcgcgctga ccatggcgat cgccggcacg atcgcacgcc cggcgcggct
    12361 gcgcctcacc tcgaccgttc accacctcga gcgcgtcggc tggcgcgccg tgccgatcat
    12421 tcttttgagc acgttcctga tcggcgccat catcgcccag cagggcattt tccacttccg
    12481 caccttcggc gccgaggtct ttgtcgtcga catggtcggc attctggtgc tgcgcgaagt
    12541 gggcgtgctg atcgtctgcg tgatggtcgc cggccgctcc ggcagcgcct ataccgccga
    12601 gctcggggcc atgaagatgc gcgaagagat cgacgcgctg cgcaccatgg gcctcgatcc
    12661 ggtcgaggtg ctggtgctgc cgcgcatcgt ggcgctggtc atcgccgtgc cgcttctcac
    12721 cttcctcggg tcgatggcgg cgctttatgg cgccggcctc gtctgctggc tgtacggcgg
    12781 catgacgccg gaaattttcc tcgaacgact gcgccaggcg atctggatgc cgaccttcgc
    12841 ggtcggcatg atcaaggccc cgttcatggc gctcaccatc gggctggtcg cctgcgtcga
    12901 ggggttcaac gtcgaaggca gcgccgcctc gctcggccgc aagaccaccg cttcggtggt
    12961 caaatcgatt ttcctcgtca tcgtgctcga cgggttcttc gccatgttct tcggcgcgat
    13021 cgggatgtga agatgaccgg caacgaggcg gtgatcagcg tgcgcgatct cgtcgtcagc
    13081 ttcggcgcgg cgacggtgct cgaccgcgtc acgctcgacg tcttccgcgg cgagattctc
    13141 ggcttcgtcg gcggttctgg tgcgggcaag tcggtgttga tgcgcacgat catcggcctg
    13201 ctgcccaagc gcgcaggcac catcgaggtg ttcgggagcg atctcgccag cctcgacggc
    13261 cgcgaacggc gcgccgtcga gcggcgctgg ggcgtgctgt tccagcaggg cgcgctgttc
    13321 tcctcgctga ccgtccgcca gaacgttcag tttccgatgc gcgagcacct cgacctgtcg
    13381 ccgcgcttca tcgacgagat cgcgctcgcc aagctggaaa tggtcggcct cgatccagcg
    13441 gtggccgaaa agttcccggc cgagctctcc ggcggcatga tcaagcgcgt ggcgctggcg
    13501 cgtgcgctcg cgctcgaccc cgacatcgtc ttcctcgacg agcccacctc cggcctcgat
    13561 ccggtcggcg ccgccgcctt cgacgagctg attcgcaccc tgcagcgcac gcttggactc
    13621 agcgtgttca tggtaacgca cgatctcgac agcctgcatg cggtgtgcga ccgcatcgcc
    13681 gtgcttgtcg acggccgcgt catcgccgcc ggcccaatcg aggccatgct cgcctccgag
    13741 catcaatggc tcaagtcgta ttttcgtggc aaacgagggc gccaagtgta ccactgagca
    13801 agtgtaccac tgagcaagtc taccactgag atgaggccga gatcgcgcgc ccggacgcaa
    13861 tggaagagac cgaatcatgg agaccagggc caactacgtg gtgaccggcg cgttcacgct
    13921 ggcggtcatc gccggcgtgt tcagcttcat cttctggttc cacaacagcg gcagcggcgg
    13981 cgagcgcgcc agctaccgcg tcgtgtttac cggctcggtc tccggccttc gcagcggcgg
    14041 ttcggtattg ttcaacggca ttcgtgtcgg cgaggtttcc gggcttgcgc tcgacgcgaa
    14101 cgatccgcgc aaggtcgtgg cgacgatttc ggtcgaccgc gccgtgccgg tgcgcgccga
    14161 cacaagggtg gcgctcgcct tccaaggact gaccggcctc gccgaggtcg cgctcaccgg
    14221 cggcgcggcc gacgcggcgc tcctcgcgag cgacgacggg acgccgccga cgctttacgc
    14281 cgctgcgggc gcgggcgccg acgtaacgca ggcggcgcgc gacgtactct cgcgcatcag
    14341 cggccttgtc gtcgacaacg agacggcgct gcgcagctcg ctgcgcaaca tcgagacggt
    14401 aacctcgacg ctggcgcaga attcggagcg cctcgacaag gtcatggccg gcctcgaaaa
    14461 cctcaccggc agcggcgaca aaagcggcga gatcgcccag gcggcagagg cggtgcgcaa
    14521 gctcgcagaa aatctggaca agcgaaccga cgagatttcg gtcgggctca cccgcttttc
    14581 caattccggc ctcaaggaat tcgaggcctt cgccgttgac ggccgtcgca cgctcgccga
    14641 gctcaacaag gcgatcaaaa acatcgacca gcacccgtcg cggctgatct tcggacagta
    14701 acgccgctag ccgttgcgcc ggtttgctcc gaaggcgtga cccgccgttt cgcgtgcgat
    14761 ggtgggtgac gcttcgctga ttcgccccac ccgatgacca acaagtggcc cttggtgctt
    14821 tcgttccgcg aaaggagcaa tccaaacgcc gcatcccgcg ctggcgggaa cgagcggcat
    14881 cgacagcgtt cacgccgcga tttctctttc ctcctccagc cggaactccg gcggcgggag
    14941 aagcgggcgc acggcgtcag tctcggccca ggtgatgatc tcgaatcggc cgtccgcgtg
    15001 ctcagcgatt gccgtgcagc tctcgaccca gtcgccgcaa ttgatgtagc ggatgccgaa
    15061 cttctcgtgg atcgcggcgt ggtggatgtg gccgcagatg acgccgtcga cgcggcggcg
    15121 gttcgcctcg gcggccagcg tctgctcgaa ggcgccgata tagttcaccg cgttcttgac
    15181 cttgtgtttc gcccactgcg acagcgacca gtaggaaaag ccgagccgcc ggcgcaacgc
    15241 gttgaagtaa cggttgacga agatggcgag atcgtaggcc ttgtcgccgg cgagcgcgag
    15301 ccagcgcgcg tgcttgacca cgagatcgaa cacgtcgcca tgcacgacga gatagcgccg
    15361 cccgtcggcg ccctcatgga tcgccgtctc cttgacctcg atgccgccga agtgggtacc
    15421 gtaatagtcg cgcagaaact cgtcgtggtt gcccggcaga tagatcatgc gggcgccctt
    15481 gcgcgccttg cgcaacagct tctgcaccac gtcgttgtgc ggctgcggcc aataccagcc
    15541 ggcgcgcaat tgccagccgt cgacgatgtc gccgaccaga tagatcgttt ccgcatcgtg
    15601 atagcgcagg aagtcgagca ggcttttggc ttggcagccg cgcgcgccaa ggtgaacatc
    15661 ggaaatgaag agagtacgga acaaacgcgt gccgtgctca actgccacga tgtttgatct
    15721 ctcgtccgtt cgccatggcc gcgtgaatag acgcgttcca ttgcagaacg atgacaacaa
    15781 aatgttgatc gctgcggccg ccgccaggaa cggtggagaa actgaaggtt aacggccgag
    15841 tcacagcgct gtcacgccgc gccggtatgc atcgccgcga tgacagcgcc gattctcgcc
    15901 gccgcgacat tctgcatcgc cgccactgcc atccatgtcg cgagcatcgt cgtcgcgatc
    15961 ctccgcttcc gggggagcgc gcttggcgaa gcgccgtcag ctcggaaatt cccccgggtc
    16021 agcctggtgc gcccgctatg cggaatagac aattatgccg ccgatacgct gggttcgaca
    16081 ttcgacctcg attatccgcg ctgcgaaatc ctattctgcg tcgcttccgc aagggatccc
    16141 gccgtgccgc tcgtcgaagc gctgatggcg cagcacccgg aagccggcgc gaagctcctc
    16201 gtcggcgacg agagggtcag cagcaatccg aagctcaata acgtgctcaa aggctggcgc
    16261 gcggcgcgcc acgattggat cgtgatcgcc gacagcaacg tgctgatgcc gcgcgactat
    16321 atcgatcgcc tgttcgcgag ctggcgcgcg gatactgggc tcgtcgcctc gccgccgatc
    16381 ggctgtcggc cgcaaggcct atgggccgag ctcgaatgcg cgttccttaa tacctatcag
    16441 gcgcggtggc agtatctcgc cgacgcgctg ggcttcggct tcgcccaggg caagaccatg
    16501 ctgtggcggc gcgcggacct cgagcgcgcc ggcggcatcg ctgcgctggc gcgcgaggtc
    16561 gcggaagacg ccgctcgacc aaggtggtgc gcgccgccgg gctcaaggtg cggctcgtcg
    16621 accggccgtt cccgcagccg ctcggctacc gtagcgccgc cgacgtatgg agccggcaac
    16681 tgcgctgggc gcggctgcgc cgcgcgagct tcttcgccta tttcctcccc gaggcgctct
    16741 ccggcggcgt gctgccgatg atcgcgctcg cctgcatcgc tccggcggtc ggcctgccgc
    16801 cgctgctgag cgtcgccgcg ctcgccgctg cgtggtatgg cagggaaatg ctgctcgccg
    16861 ccgcggccgg atggcacctc ccggcgctct atccgctctt tgggctcgcg cgcgatctgc
    16921 ttctgccctt cctcttcgtc ggagcgctgc acggcgacga cttcgtctgg cgcggcaacg
    16981 aaatgcaggt cgagcgcatg cgcccgcgcg ggatgatggc gctggtgcgg ccgcgactca
    17041 atgagatcgc gccggtcgcg cgccgccgct tgcgcgcgct gcgcgccagg atgtcgtgaa
    17101 gcgaggcgaa cgggccgtgc cgcgttccct ccgttcaatg cgcccgacca gcttgcgcag
    17161 cctcatcggc aatggcgtcg agcgccgcgc gctcaagtgg gaaatcggcc gcgatccacg
    17221 ccgcttcggc cgcgcgcatg gcggcgccga gcgccgggcc ctgccctagt ccgcggcgga
    17281 tgaaatccgc cgccttgagc gggaagacag ggaatgtcca tcgttgcggc aggcttgcaa
    17341 gctcgcgcca agccgcatcg gcggttcccg ccggcgagcg cgcccaggcg acaagcaccc
    17401 ggtcggcgaa cgattgcggc ccgaggcgat agaggagcgc gcgcgccgcc tgctcgcggg
    17461 ccgccggcgc gacgcgccac caggcttcga gagcgatgag ccgctccgtc tctgcgttgg
    17521 cgaggcgcag ccgctgcgcg agcctttccg catcctcctt gaccagcacc gcaagcccgc
    17581 cgaggcggcg cactgcgtcg ggcgccatgc cgcacgccgc ctcgatcttc gccacgttct
    17641 cgaagcttgc gagcagtggt acgccgccga gcacgccgcc gagcaggcca gcctccgtca
    17701 tcaccgcaag tgtcggggcc gcatgcggcg cgagcagaag cttgagcacc tccatgcgca
    17761 ctcgttcgcg cgagagccgt tcgaggccgg cgcgcgccct gatgcaggcg agcaaaccag
    17821 ccgcgtccgg ggcgccttcg ccgaaatagg cgtggaagcg gaagaagcgc aggatgcgca
    17881 ggtaatcctc ttcgatgcgc ttctgcgcgt caccgatgaa gcgcacgcga cgcatggcga
    17941 tgtcggcaag gccgccgaca tagtcgtaga ccatgccgtc ggcggaagcg gaaagcgcat
    18001 tgatggtgaa gtcgcgccgc tcggcgtcgg cgcgccagtc gcggccgaag gcgacgcgcg
    18061 ccttgcggcc gaaggtttcc acgtcctggc gcagcgtcgt cacctcgacc ggctgacgct
    18121 cgatgat
//
LOCUS       DATMQB010000184         9808 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4085672, whole genome shotgun sequence.
ACCESSION   DATMQB010000184 DATMQB010000000
VERSION     DATMQB010000184.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9808)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9808)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9808
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4085672"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..555)
                     /locus_tag="VNY79_05645"
     CDS             complement(<1..555)
                     /locus_tag="VNY79_05645"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003883 - CTP synthase activity [Evidence
                     IEA];
                     GO_process: GO:0006221 - pyrimidine nucleotide
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0006241 - CTP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HWX71961.1"
                     /translation="MARYIFITGGVVSSLGKGLASAALGALLQARGYKVRLRKLDPYL
                     NVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTGRPATRQDNITTGRIYQDILTKE
                     RRGDYLGATIQVIPHVTNAIKEFILDGNAGFDFVLVEIGGTVGDIEGLPFFEAIRQLG
                     NELPRQHVVYIHLTLLPFIPSAGEL"
     gene            complement(747..1139)
                     /gene="secG"
                     /locus_tag="VNY79_05650"
     CDS             complement(747..1139)
                     /gene="secG"
                     /locus_tag="VNY79_05650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007590603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0015450 - protein-transporting ATPase
                     activity [Evidence IEA];
                     GO_process: GO:0043952 - protein transport by the Sec
                     complex [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HWX71962.1"
                     /translation="MLTVLIVIHLMLVLAMVGVVLLQKSEGGGLVSSTSGFLTGRGTA
                     NVLTRTTAFLAIGFFITSLTLSWLAGLGRKPTSIINPSAPATQEVPAGSPIAPLSRSG
                     RGVLDQLQGSAPANAPAAPSGPQVPQSK"
     gene            complement(1240..1989)
                     /gene="tpiA"
                     /locus_tag="VNY79_05655"
     CDS             complement(1240..1989)
                     /gene="tpiA"
                     /locus_tag="VNY79_05655"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004807 - triose-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HWX71963.1"
                     /translation="MTARRPLVAGNWKMNGLSASSGTLDGIIAGAAKLPENIDVLVCP
                     PFLLIPGFAAQARGTRVAIGGQDCHPEPSGAHTGDIAAEMLADAGATAVIVGHSERRQ
                     DHHETDAEVRAKALAARRAGLLAVVCVGETRAERHAGDALVVVRAQLDGSLPDSAEHL
                     VIAYEPVWAIGTGLTPTLRDVAEMHNFIRRQLVSRYGEAGQGLRVLYGGSVKPANAKE
                     LLARENVDGALVGGASLVAGQFLAIAGACRP"
     gene            2318..4228
                     /locus_tag="VNY79_05660"
     CDS             2318..4228
                     /locus_tag="VNY79_05660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SurA N-terminal domain-containing protein"
                     /protein_id="HWX71964.1"
                     /translation="MLRGIRKASANWLGRAVMGGVMGLLALSFAVWGINDIFRGFGRS
                     TLAKIGGTEIPIEQFRQTYNERLQQISRKWGRPVPREQASAMGLDRQVLSEMIAEAGL
                     DQRARQMRLGISDAEVVRRITTDPVFHNAGGNFDPARFQDVLRNNGYSEQRFVAEQRR
                     LMLRRQIAGSVSGDMPVPKAWLDAVNQYENEERSIEYVPLGPAQAGEIPQPTADELNK
                     YFEARKVMFQAPEYRKIVTVDGTPTELGKWIEVSDEEVKRAFDEHRSRYVRPEQRHVQ
                     QIVFPTMQEAEAADARLKEGLSFAALAAERGLKEQDFDLGMATKADILDPAVADAAFA
                     LKEGEVSAPVKGRFGAAVVTVTKIEPAEDKTLADVAPQVRKDVVAERAKAEVRHIHDK
                     IEDERAGGSTLEEAAEKLKLPVATYEVDISGREPQGKPLANLGRLGGVIKAAFGSDVG
                     VDNDPIETDGGNVWYSVSGITPSRDRTLEEVKGQVEARWREDEIATRLKAKAADLLDK
                     LKGGNGLEAVAKANDLTVEKADKIKRGKPSGSISASMAGSIFHTAKDAFGSSEGDKPG
                     EWVVFRVTDVATPKLEANSAYEKSIVEIVRSRTADDVFGEYLAWLEDELGTSVNRAAL
                     AQALGGSAPDTN"
     gene            4230..5771
                     /gene="trpE"
                     /locus_tag="VNY79_05665"
     CDS             4230..5771
                     /gene="trpE"
                     /locus_tag="VNY79_05665"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004049 - anthranilate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0000162 - tryptophan biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HWX71965.1"
                     /translation="MLIEPSAAAFAARYAAGEPQVVWTTLVADLETPVSAFLKLSGTR
                     PQSFLLESVEGGEVRGRYSIIGLEPDLIFRVHDRRAEINRRPQSDPNAFAATGDGPLR
                     ALRSLIAESRIALPESLPPMAAGVFGYLGYDMVRLMEDLPAAGPDPIGIPDAILVRPT
                     LVVAFDAVEDTITVVTPVRPQAGVTAKAALARAVERLSGVVDALDQPLDKSAAEIVRP
                     PPFAGDGKEGAAAPRSNTTPEEFRRMVVRAKDYITAGDIFQVVLSQRFETPFALPAFA
                     LYRALRRVNPSPYLFFLDFGAFAVAGSSPEILVKASHGIVTVRPIAGTRRRGATPHED
                     KALEEELLTDPKERAEHLMLLDLGRNDVGRVAEIGSVKVTDQFFIERYSQVMHIVSNV
                     EGRLRQDRDPLDALAAGFPAGTVSGAPKVRAMEIIDELEKEKRALYAGCVGYFSAGSE
                     MDTCIVLRTALIKDGIMYVQAGAGIVADSDPEFEQQECISKAKALFRAAEEARRFASA
                     ARRGQ"
     gene            complement(5893..8331)
                     /locus_tag="VNY79_05670"
     CDS             complement(5893..8331)
                     /locus_tag="VNY79_05670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012028989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX71966.1"
                     /translation="MKIMPTLVFAMLSVAATPGAVQTKYDTGAGETLIAAGDPAPHFG
                     VVVADRSNGAAPPPAPAPAMQGKYDPGASSTEIKIGNIMPYSGPAAAYGLIGKTVAAY
                     FKKINAEGGINGRKINFISYDDGYNPQKAVEAARKLVEDDRVLFVFQSLGTPSNSAIQ
                     KYMNDTHVPQLFVASGATKWDDPVNHPWTMGWQPNYQTEGRIFGQYLLANQPRGKIAI
                     LYQNDEYGKDYMKGLKDALAGAIPVVAEASYETSDANLNTQMAKLKTSGADVFFDVAT
                     PKFAVMAMKRAAEIGWKPLHFVNSVSNSVASVIKPAGFENAQGILAANYMKETGDPLW
                     KDDPAYKEWLDFMDRYFPEGDKNNGLSVYAYSVAQTLVQVLTQCGNQLTRENVMRQAA
                     NLKGLRLGMLLPGIVINTSASDFAPIEQMQMMRFSGERWEPFGSVLSGVDPGAVSEGL
                     RAIFRYGSANHDLADRLNANTVTMMTGAFGGTYEQFGADLASVLDEGDNLRLLPIVGR
                     GSVQGVADILFLKGVDLGIVRSDTLDYIERKGYASNLKKQFNYIAKLYNEEVHVVAAK
                     TIGSLADLDGKTVAVGSANGGTFVTAIAIFERLNIRPHFLYIEQRVALERLKRGEIDA
                     VVAVEGKPLQEIARLDSDDLHFVPIDYQKPLQEDYLPTQLTAEDYPNLIAAGHGIDTV
                     AVSAVLAAYSWAPRTDRYRRLELVVNALFSKIKELQRPPFHPKWREVALNAPLPGWTR
                     FAPAQTWLDHNKPAPAAAAPQAQNDIGQGKDLESLRQFLDWEARNDGQRSEDREALFR
                     QFLDWRKRQPVGAR"
     gene            complement(8382..9401)
                     /locus_tag="VNY79_05675"
     CDS             complement(8382..9401)
                     /locus_tag="VNY79_05675"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71967.1"
                     /translation="MSSPIDEAKDVNPALPAATGVSPVLLYAPQWARDQAQPPTDGGP
                     APPIEWPPRGRRLDNVRIFDERAALEARRELALQPEKVPEPPQPDPSDQIKTVLRICG
                     VAGAAAVVAWTLVSTLDAGSPRHEPTRTSSTARPVAVAPAKPDSPPVALAARLDANSA
                     GSNGDEVGQVSREVSRQESREVSLQESREEPQESHQEPRREAILGVPAALAASTVAAE
                     AVPAIALDTPKAERTPPSLIIRQMDRDELALLVRRGEIFINSGDVAAARLMLQRAAEA
                     GDVHAALALASTFDPNTIQKLGIQGLAADEAMARLWYERAAQFGSPEAPQRLQQLANQ
                     ANLLP"
BASE COUNT         1646 a         3242 c         3254 g         1666 t
ORIGIN      
        1 gagctcgccg gcggaaggga tgaacggcag cagcgtgagg tggatataga cgacatgttg
       61 ccgcggcagc tcgttgccga gctggcggat cgcctcgaag aacggcaggc cctcgatgtc
      121 gccgacggtg ccgccgatct cgaccagcac gaagtcgaac cccgcgttgc cgtcgaggat
      181 gaactccttg atggcgttgg tgacgtgggg gatgacctgg atggtggcgc cgagatagtc
      241 gccgcgccgc tccttggtga ggatgtcctg gtagatgcgc ccggtggtga tgttgtcctg
      301 gcgggtcgcc gggcgtccgg tgaagcgctc gtaatggccg agatcgagat cggtctcggc
      361 gccgtcgtcg gtgacgaaca cctcgccgtg ctggtagggc gacatggtgc cgggatcgac
      421 gttgagatac ggatcgagct tgcgcaggcg caccttgtag ccgcgtgcct gcaggagtgc
      481 gccaagcgcc gccgaagcga gacccttgcc gagtgaggag accacgccgc cggtgatgaa
      541 aatataccgc gccatgggac ctaacttgta tcgccgatcc cacgattcga cgagcgcttt
      601 tccggaatgg ctgccgagca cccgccgcga caagcacgga aagcgtcgcg attaccggct
      661 gttcgcctga aatcctcagg ccgcgccgga gacgccgccg cccttgttgc aagaggcacg
      721 gcgctcgctt ccggcatggt tgcggcctat ttcgattgag gcacttgcgg cccgctcggc
      781 gccgccgggg cgttggccgg cgcgctcccc tgcagctgat cgaggacgcc gcggccgctt
      841 cggctaagcg gggcgatcgg cgagcccgcc ggcacttcct gcgtcgccgg cgcactggga
      901 ttgatgatag aggtgggctt gcggccgagc cccgcgagcc aggacagcgt caggctggtg
      961 atgaagaagc cgatggccag aaacgccgtc gttcgcgtca acacattggc cgtgccgcgg
     1021 ccggtgagaa agccgctcgt ggagctgacg aggccgccgc cctccgactt ctgcagcagc
     1081 accacgccga ccatggcgag gaccagcatg aggtggatga cgataaggac tgtcagcatc
     1141 gacgattccg gatgtcttgc ttgccgcagg cgcgcggcag cgagcctcgc cttcatatag
     1201 gaggctgcgc gggtctctac atgatccgtt atggattttc tatggccggc aggcgccggc
     1261 gatcgccagg aattgcccgg ctacgaggct cgcgccgccg accagagcgc cgtcgacatt
     1321 ctccctcgcc agcagttcct tggcgttggc gggcttcacc gagccgccgt acagaacgcg
     1381 gagcccctgc cccgcttcgc cgtagcgcga aacaagctgg cggcggatga aattgtgcat
     1441 ctcggcgacg tcacgcaggg tcggggtcag cccggtaccg atcgcccaga ccggctcata
     1501 ggcgatcacc agatgctcgg cactgtccgg cagcgagccg tcgagctgcg cgcgcacaac
     1561 gacgagcgca tctccggcat ggcgctcagc gcgggtctca ccaacgcaga cgacggcgag
     1621 aagcccagcg cgccgcgctg caagcgcctt ggcgcgcact tccgcgtcgg tctcatgatg
     1681 gtcctgccgc cgctcggagt gaccgacgat aacggcggtc gcgccggcat cggcgagcat
     1741 ttccgcggcg atgtcgccgg tatgcgcccc ggagggctca gggtggcaat cctgaccgcc
     1801 gatggcgacc cgggttcccc gcgcctgggc ggcgaagccg ggaatgagca gaaacggcgg
     1861 gcagaccagg acgtcgatgt tctctggcag cttggcggct ccggcaatga tcccgtccaa
     1921 cgtgcccgag gaggcggaga ggccgttcat cttccaattg ccggcaacga gcggacggcg
     1981 tgcggtcatg ggatctccgt tcgccgcttc aatcggccag ggcagtctcg aataacgtcg
     2041 gcgggtcgat gttgatcgtg ccgcggttca tgccggcgca tcggtggtgt cgcggacaac
     2101 gggaaaacac aggcagcgtc gggcgcatgc gacaaagagc cgttagcaga gccgttgcag
     2161 accgaaaagg ggcgttttac gtgaaaattc ctttagttgc agggcaacgt ggcgctccct
     2221 atgatgcgcc gccttttgcc ggcctatatt tggccggatc actccagccg ccgccgctgg
     2281 gacttccgca ctgcgcggga cgacggaacg tgttctgatg cttcggggta tccgcaaagc
     2341 ctccgccaat tggctcggcc gcgccgtgat gggcggggtc atgggcctgc tcgccttgag
     2401 cttcgcggtc tggggcatca acgacatctt ccgcgggttc ggccgctcga cgctcgccaa
     2461 gatcggcggc accgaaattc cgatcgaaca attccggcag acctataacg agcgcctgca
     2521 gcagatcagc cgcaagtggg gccgtcccgt gccgcgagag caggcgagcg cgatgggcct
     2581 cgatcggcag gtactgagcg agatgatcgc cgaggccggg ctggaccagc gcgcgcggca
     2641 gatgcggctc ggcatctccg acgccgaggt cgtccgccgc atcaccaccg atccggtgtt
     2701 tcacaacgca ggcggcaact tcgacccggc gcggttccag gacgttctgc gcaacaacgg
     2761 ctattccgag cagcggttcg tcgccgagca gcggcggctg atgctgcgcc ggcagatcgc
     2821 cggctcggtc tccggcgaca tgccggtgcc gaaagcctgg ctcgacgcgg tcaaccagta
     2881 cgagaacgag gagcgcagca tcgaatatgt gccgctgggg ccggcgcagg cgggcgagat
     2941 tccgcagccg actgcggacg agctcaacaa gtatttcgag gcgcgcaagg tcatgttcca
     3001 ggcgccggag taccgcaaga tcgtcaccgt cgatggcacg cccaccgaac tcggcaagtg
     3061 gatcgaggta tccgacgagg aggtcaaacg cgccttcgac gagcaccgca gccgttacgt
     3121 cagaccggag cagcggcacg tccagcagat cgtctttccg accatgcagg aggccgaggc
     3181 cgccgacgcc cggctcaagg agggcctgag tttcgcggcg ctcgctgccg agcgcgggct
     3241 caaggagcag gacttcgacc tcggcatggc gaccaaggcg gacatccttg atccagccgt
     3301 cgccgacgcc gcgttcgcgc tcaaggaggg cgaggtaagc gcgccggtca agggccgctt
     3361 cggcgcggcc gtcgtgaccg tcaccaagat cgagcccgca gaggacaaaa cgcttgccga
     3421 cgtcgcgccg caggtacgca aggacgtcgt cgccgaacgc gccaaggccg aggtacggca
     3481 catccacgac aagatcgagg acgagcgcgc cggcggcagc acgctcgaag aggcggcgga
     3541 gaagctgaag ctgccggtcg ccacctacga ggtcgacatc tccggccgcg aaccgcaggg
     3601 caagccgctc gccaatctcg gccgcctcgg cggtgtgata aaggcggcgt ttggttccga
     3661 tgtgggcgtc gacaacgacc ctatcgagac cgacggcggc aacgtctggt attccgtgtc
     3721 cggcatcacg ccgtcgcgcg atcgcacgct cgaggaagtc aagggccagg tcgaggcgcg
     3781 ctggcgcgag gacgagatcg ccacccgcct caaggccaag gcggccgatc tcctcgacaa
     3841 gctcaagggc ggcaatgggc tcgaggccgt cgccaaggcc aacgatctca ccgtcgaaaa
     3901 ggccgacaag atcaagcgcg gcaagccgtc ggggagcatc tcggcgtcga tggccggttc
     3961 gatctttcac accgccaagg acgccttcgg cagctccgag ggcgacaagc ccggcgaatg
     4021 ggtcgtcttt cgcgtcaccg atgtcgccac gccgaaactc gaagcgaact cggcttacga
     4081 gaaaagcatc gtcgaaatcg tgcggagccg gacggccgac gacgtgttcg gcgaatatct
     4141 ggcatggctc gaggatgagt tgggcaccag cgtcaaccgc gcggcgttgg cgcaggcgct
     4201 gggcggcagc gccccggaca ccaactgaaa tgctgatcga gccgtcggcc gcggcattcg
     4261 ccgcgcgcta tgcggccggc gagccgcagg tggtgtggac gacgctagtc gccgacctgg
     4321 agacgccggt ctccgccttc ctcaagcttt ccggcacacg gccgcagagc tttttgctcg
     4381 aatcagtcga aggcggcgaa gtacgcggac gatattcgat catcggcctt gagcccgacc
     4441 tgatcttccg cgtccacgat cggcgcgccg agatcaaccg caggccacag agcgatccca
     4501 acgcctttgc cgcgaccgga gacgggccgc tccgcgcctt gcgcagcctc atcgccgaga
     4561 gccgcatcgc gctgcccgag tcgctgccgc cgatggccgc cggcgtcttc ggctatctcg
     4621 gctatgacat ggtccggctg atggaagacc tgccggcagc cggccccgac ccgatcggca
     4681 ttccggacgc gatcctcgtc cggccgaccc tcgtcgtcgc cttcgacgcg gtcgaagata
     4741 cgatcactgt cgtcacgccg gtgcggccgc aggcaggcgt gaccgcgaag gcggcgctcg
     4801 cgcgcgcggt cgaacgcctc tccggcgttg tcgatgccct cgaccagccg ctcgacaaat
     4861 cggcggcgga gatcgtgcgc ccgcccccgt tcgcgggcga cgggaaggag ggggcggcgg
     4921 cgccgcgctc gaacacgacg ccggaagagt tcaggcgcat ggtcgtacgc gccaaggact
     4981 acatcaccgc tggcgatatt tttcaggtcg tgctgtcgca gcgcttcgaa acgccgttcg
     5041 cgctgccggc gttcgcgctc taccgcgcgc tacggcgcgt caacccttcg ccgtatctgt
     5101 tctttctcga ttttggcgcc ttcgcggtcg ccggatcgag ccccgagatc ctggtcaagg
     5161 cgagccacgg tatcgtcacc gtccgcccca ttgccggcac gcgccggcgc ggcgccaccc
     5221 cgcacgaaga caaggcgctg gaggaggaac tgctcaccga tccgaaggaa cgcgccgagc
     5281 acctgatgct gctcgacctc ggccgtaacg atgtcgggcg cgtcgccgag atcgggtcgg
     5341 tcaaggtcac cgaccaattc ttcatcgagc gctacagcca ggtcatgcac atcgtttcca
     5401 acgtcgaagg caggctgcgc caggaccgcg atccgctcga tgctctcgcc gccggcttcc
     5461 cagcgggcac tgtgtcggga gcaccgaagg tgcgcgccat ggagatcatc gacgagctgg
     5521 agaaggagaa gcgcgcgctc tacgcggggt gcgtcggcta cttctccgcc ggctcggaga
     5581 tggacacctg catcgtgctg cgcaccgcgc tcatcaagga cggcatcatg tacgtgcagg
     5641 ccggcgccgg catcgttgct gattccgatc ccgagttcga gcagcaggag tgcatcagca
     5701 aggcaaaggc gctgttccgc gccgccgagg aagcgcggcg tttcgccagt gccgcgcgac
     5761 gcgggcagta ggccgccgcc gcacggacac gggccgcaac ggtgaaggag accgccctcc
     5821 caagcggtct ccttgccgcc ctccctgcag cgatcactcc tcgaagcgat tcactctccg
     5881 ccgacgctca cgctatctcg cgccgaccgg ctgccgtttc cgccaatcga ggaactggcg
     5941 aaacagcgct tcgcgatcct cgctccgttg gccgtcgttc ctggcctccc agtcgagaaa
     6001 ttggcgaagc gactcgaggt ccttgccctg cccgatatcg ttctgggcct gcggcgcagc
     6061 cgcggccggc gccggcttgt tgtggtcgag ccatgtctgc gccggcgcga agcgcgtcca
     6121 tccgggcagc ggcgcattga gcgccacctc gcgccacttc ggatggaacg gcggccgttg
     6181 caactccttg atcttggaaa agagcgcatt aacgacaagc tcgagccggc ggtagcggtc
     6241 ggtgcgcggg gcccaactgt aggccgcgag caccgccgac accgccaccg tatcgatgcc
     6301 atgcccggca gcgatcaggt tcgggtagtc ttccgccgtg agctgcgtcg gcagatagtc
     6361 ttcctgcagc ggcttctggt aatcgatcgg cacgaaatgc agatcgtcgc tgtcgagccg
     6421 agcaatctcc tgcagcggct tgccttcgac cgcgaccacc gcgtcgatct cgccgcgctt
     6481 cagcctctcg agcgccaccc gctgctcgat gtagagaaag tgcggtctga tgttgagccg
     6541 ctcgaagatg gcgatggcgg tgacgaacgt gccgccattc gccgagccga cggcgaccgt
     6601 cttgccgtcg agatcggcga ggctgccgat cgtcttcgcc gccacgacat gcacctcttc
     6661 gttgtagagc ttggcgatgt agttgaactg cttcttgagg ttgctcgcgt agcccttccg
     6721 ctcgatgtaa tcgagcgtgt cggagcggac gatgccgagg tcgacgcctt tgaggaagag
     6781 gatgtcggcg acgccctgga ccgacccgcg tccgacgatc ggcagcagcc gaagattgtc
     6841 gccctcgtcg agcaccgagg cgagatcggc gccgaactgc tcgtaggtgc cgccgaatgc
     6901 ccccgtcatc atcgtgaccg tgttggcgtt gagccgatcg gcgagatcgt ggttcgccga
     6961 tccgtagcgg aagatggccc gcagcccttc gctgaccgca cccggatcga ccccgctgag
     7021 caccgaaccg aacggctccc agcgctcgcc ggaaaaccgc atcatctgca tctgctcgat
     7081 cggcgcgaag tcactcgcgc tggtgttgat gacgatgcca gggagcagca tgccgagccg
     7141 caggcccttg aggttcgccg cctgccgcat cacgttctcg cgcgtgagct gattgccgca
     7201 ttgcgtgagt acctgcacga gggtctgcgc cacgctgtag gcatagacgc tgagcccgtt
     7261 gttcttgtcg ccctccggaa aatagcgatc catgaagtcg agccactcct tgtacgccgg
     7321 atcgtccttc cacagcggat cgcccgtctc cttcatgtag ttggcggcga ggatgccctg
     7381 cgcgttctcg aagccggccg gcttgatcac cgaggcgacc gagttcgaca cgctgttgac
     7441 gaagtgcagc ggcttccagc cgatctcggc cgcccgcttc atggccatga cggcgaattt
     7501 cggggtcgcc acgtcgaaga acacgtcggc gcccgacgtc ttgagcttcg ccatctgggt
     7561 gttgaggttg gcgtcgctgg tttcgtagct ggcttcggcg acgaccggga tcgctccggc
     7621 gagcgcatcc ttgagaccct tcatgtagtc tttgccgtat tcatcattct gatagaggat
     7681 cgcgatcttg ccgcgcggct ggttggccag cagatactgg ccgaagatgc ggccttcggt
     7741 ctgatagttc ggctgccatc ccatcgtcca cggatggttg accggatcgt cccatttggt
     7801 ggcgccggag gcgacgaaga gctgcggcac atgcgtgtcg ttcatgtatt tctggatcgc
     7861 ggaattcgac ggcgttccga gactttgaaa cacgaacagg acgcgatcgt cctcgacgag
     7921 cttgcgcgcg gcctcgacgg ccttttgcgg gttgtagcca tcgtcgtagg agatgaaatt
     7981 gatcttgcgg ccgttgatgc cgccttcggc gttgatcttc ttgaagtacg cggcgacggt
     8041 cttgccgatc aggccgtagg cggcggccgg cccgctatag ggcatgatgt tgccgatctt
     8101 gatctcggtg ctgctcgcgc ccggatcgta tttcccttgc atggctggcg ccggtgccgg
     8161 cggtggtgcc gcgccgttgc tgcggtcagc gaccaccacg ccgaaatgcg gcgccggatc
     8221 gcccgccgca atcaaggtct cgccggcgcc ggtatcgtac ttcgtctgca ccgctccagg
     8281 cgtcgctgcc acgctgagca tggcgaatac gagtgtaggc atgatcttca tgcgtgcctc
     8341 ccccaaaaat ctactctagc cacgattgcc cgaccgctgc ctcacggcag caggttggct
     8401 tggttcgcca gctgctgaag gcgctgcggc gcttcaggcg agccgaattg cgcggcgcgc
     8461 tcgtaccaca ggcgcgccat ggcttcgtcc gccgcaagac cctggatgcc gagcttctga
     8521 atggtgttcg ggtcgaacgt gctggcgagc gccagtgccg cgtgcacgtc gccggcttcc
     8581 gccgcgcgct ggagcatcaa gcgcgccgcg gcgacgtcgc cggaattgat gaagatttcc
     8641 ccgcgccgca ctagcaacgc caactcatcg cggtccatct gccggatgat caggctcggc
     8701 ggcgtgcgct ccgcctttgg cgtatcgagc gcgattgccg gtaccgcttc ggccgcaacg
     8761 gtgctggcgg cgagcgccgc cggcacgcct aaaattgcct cccggcgcgg ctcttgatgc
     8821 gattcttgcg gctcttcgcg cgactcttgg agcgacactt cgcgcgactc ttggcgcgac
     8881 acttcgcgcg acacttggcc cacctcgtcg ccgttcgatc cggcactatt cgcgtccagc
     8941 cgcgccgcaa gagccaccgg cggcgagtcc ggcttagcgg gagcgactgc aaccggcctt
     9001 gccgtggagc tggtgcgcgt cggttcgtgc cgcggcgatc ccgcgtcgag cgtcgatacg
     9061 agcgtccacg cgacgaccgc tgcggcgccc gccacgccgc agatgcgcag cacggtcttt
     9121 atttgatcgc tcggatcggg ttgcggcggt tctggaacct tttccggctg cagcgcgagc
     9181 tcgcgccgcg cctccagcgc cgcacgctca tcgaagatgc gaacgttgtc gaggcgccgt
     9241 ccccgcggcg gccactcgat cggcggcgcc gggccgccgt cggtcggcgg ttgcgcctgg
     9301 tcccgcgccc attgcggcgc atacagcaaa acgggactga cacctgtggc tgctggcaaa
     9361 gcaggattga catctttggc ttcgtcgatc ggagaactca tgaccgcctc ccctgtgctt
     9421 tcaagctccg atggtcaaca acagatcgcg ctacccctca ttcagtctcg gccagaagaa
     9481 gagtcatgga gatcgcccgc cggcgctgtt gcgcaattgc cggcaagctc gggcgacccg
     9541 ccgcccgcgg cggaccgatg tttggaaacg gcgggatgag tacgttgcga ttgccgagcg
     9601 cgaccgctgg cgtattggtg ctaaccggca cgccgcgccg accgaggcgc gccccgatct
     9661 tcgagcgcgc tcaccggcgc gtcgaagcgc aggggaaagg gatgcggtcg gcggaaccgc
     9721 gaccaatacg caaagcacct gaaaaggccc gtgcagccac cgcaactccc cccacatcgt
     9781 tttccccgcg gcggacctgc gcgttacg
//
LOCUS       DATMQB010000185         4546 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4085723, whole genome shotgun sequence.
ACCESSION   DATMQB010000185 DATMQB010000000
VERSION     DATMQB010000185.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4546)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4546)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4546
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4085723"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(143..1393)
                     /gene="cbiE"
                     /locus_tag="VNY79_05680"
     CDS             complement(143..1393)
                     /gene="cbiE"
                     /locus_tag="VNY79_05680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010910122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046025 - precorrin-6Y
                     C5,15-methyltransferase (decarboxylating) activity
                     [Evidence IEA];
                     GO_process: GO:0046140 - corrin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-6y C5,15-methyltransferase
                     (decarboxylating) subunit CbiE"
                     /protein_id="HWX71968.1"
                     /translation="MSLPDAIARETAASPRWLSIVGIGEDGVDGLSAAARGLIGAAEI
                     VYGGRRHLSLAAPLIRGAARPWPSPFDGAGDEVLRHRGRQVCVLASGDPFHYGVGATL
                     ARRVDAREMLVVPASSAFSLAAARLGWSLPQTALLSVHGRTLDLVRPHLQPSARILAL
                     TSDGEGAAALAKLLTDTGFGASRLTVLEALGGPRERIRATTAVGFDLGTVDALNTVAI
                     EVEAAPGARVIARTAGLADDLFEHDGLITKREVRAVTLSSLAPRRGELLWDIGAGSGA
                     VAIEWMLADPLVMRAVAIERQSERAARIRRNAAAFGVPGLEVVEGLAPAALEKLASPD
                     AIFIGGGAGDPCVIEAAINALRSGGRLVVNAVTLETEAMLIDRHKKFGGELTRIAIAR
                     AAALGEKTGWRAAMPVTQWLWTKQ"
     gene            1392..2156
                     /locus_tag="VNY79_05685"
     CDS             1392..2156
                     /locus_tag="VNY79_05685"
                     /EC_number="1.3.1.106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006335692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016994 - precorrin-6A reductase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-6A reductase"
                     /protein_id="HWX71969.1"
                     /translation="MPRVLILGGTAEARMLAVRLAGRPDLEVTLSLAGRTASPAPQPV
                     PVRRGGFGSAAGLADYLVGERIAALIDATHPYANVISANAVAAAREADVPSVALRRPP
                     WTAVAGDRWIEVSDAGEAVRALGQAPRRVFVALGRQELAPFTQAPQHHYLIRSVDPVD
                     PPLPLPHVTYVTGRGPFSEPDDRALMTTHRIDIVVAKNSGGGATYGKIGAARALGIEV
                     VMLRRPQAPEAPAVETIDDAVAWLAHALTSAAARGV"
     gene            complement(2120..2884)
                     /locus_tag="VNY79_05690"
     CDS             complement(2120..2884)
                     /locus_tag="VNY79_05690"
                     /EC_number="2.1.1.131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012490742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-3B C(17)-methyltransferase"
                     /protein_id="HWX71970.1"
                     /translation="MSGHLAVVGLGPGDARYLTSEAAAALAAADALYGYVPYLDRVPA
                     RAGQSRHASDNREERARAAAALDHAAQGARVAVVSGGDPGVFAMAAAVCEEIEAGPAS
                     WRALDIEIIPGITAMLAVAARIGAPLGHDFCALSLSDNLKPWELIERRLDAAATAGFV
                     IALYNPVSRARPWQFGATIERLRRHLPPATPVVLGRAVGRADEQVSVVTLAAADTASA
                     DMATLVIVGSRETRVIARRGRSPLVYTPRAAAEVSA"
     gene            complement(2881..3609)
                     /locus_tag="VNY79_05695"
     CDS             complement(2881..3609)
                     /locus_tag="VNY79_05695"
                     /EC_number="2.1.1.130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003528814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030788 - precorrin-2
                     C20-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-2 C(20)-methyltransferase"
                     /protein_id="HWX71971.1"
                     /translation="MSAAKLIGVGVGPGDPELMTLKAMRALGEADVIAYFAKAGHASH
                     SLATAAPHLRNGATQLPLLYPVTTELPKCSDRYRDAIRDFFDGAAATLAAHLEAGRTV
                     AVICEGDPLFYGSYMHLHARLAPRFTAEIVAGVTGMSGCWSAAGMPIAQGDDVFTVLP
                     ATLPEAELARRLGEADAAVVMKVGRHLPKLRRALERSGRLPRAIYVEHGTMADAVMMP
                     LSAKPDDEAPYFAVVLVPGWEGRP"
     gene            complement(3606..4241)
                     /locus_tag="VNY79_05700"
     CDS             complement(3606..4241)
                     /locus_tag="VNY79_05700"
                     /EC_number="5.4.99.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016993 - precorrin-8X methylmutase
                     activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-8X methylmutase"
                     /protein_id="HWX71972.1"
                     /translation="MSEPAAYLRDGAAIYQRSFAIIRAEADLARFSAGEAEVAVRMIH
                     ACGVVEAARHIAFGAGLVPAAREALAAGASILCDSEMVAHGVTRARLPAGNAVICTLN
                     DPRVPALAEKLGNTRSAAALDLWLDRLAGAVVAIGNAPTALFRLLDLLDAGAPKPAAI
                     LGIPVGFVGAAEAKEALASNPRGVPFLIVRGRMGGSAMTAAAVNALARPGL"
     gene            complement(4234..>4546)
                     /locus_tag="VNY79_05705"
     CDS             complement(4234..>4546)
                     /locus_tag="VNY79_05705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013894803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="precorrin-3B synthase"
                     /protein_id="HWX71973.1"
                     /translation="VIACAGAPVCAAAHIAARAMAPAIAATAAPLLDRSFTIHVSGCA
                     KGCAYPRAAALTVVGTPEGCALIADGSALDIPHAVVSADELPAAIARSARTRTGDSGH
                     V"
BASE COUNT          650 a         1647 c         1643 g          606 t
ORIGIN      
        1 ccggcctcgc tgcgtttcgc ctgcggcgtg gcgatggcat cgagcgcgtc ggcggcgatg
       61 ccggcgcgcg tgagcgcggc gcggatcgcg gtttcgatgt ccggggctgg cgcgccccgt
      121 cggcagccga cgccggcgac gatcattgtt tggtccacag ccattgcgtc accggcatcg
      181 ccgcgcgcca gccggtcttt tcccccagcg cagcggcgcg cgcaatcgcg atgcgcgtca
      241 gctcgccgcc gaactttttg tgccggtcga tgagcatcgc ctcggtttcg agcgtcaccg
      301 cgttcacgac gaggcggccg ccggagcgca gcgcgttgat tgccgcctcg atcacgcagg
      361 gatcaccggc gccgccgccg atgaaaattg catcgggcga cgcgagcttt tcgagcgctg
      421 ccggcgcaag gccttccacg acctcgagcc ccggtacgcc gaaggcggcg gcgttgcggc
      481 ggatgcgggc ggcgcgctcg ctttgccgct cgatcgcgac cgcacgcatg accagcgggt
      541 cggccagcat ccattcgatc gccaccgcgc cggagccggc gccgatgtcc cacagcagct
      601 cgccgcggcg cggcgccagc gacgacaacg tcaccgcccg tacctcgcgc ttggtgatca
      661 ggccgtcatg ctcgaagaga tcatcggcga gtccggccgt gcgcgcgatg acgcgcgcac
      721 cgggcgcggc ctcgacttcg atcgccaccg tgttgagcgc atcgacggtg ccgagatcga
      781 atcccacggc ggtcgtagct cggattcgct cgcgcgggcc gccgagcgcc tcgagcaccg
      841 tgagccgcga ggcgccgaag cccgtgtctg tcagaagctt cgccagtgct gcggcgccct
      901 cgccgtcgga ggtcagcgcc aggatgcgcg cgctgggctg cagatgcggg cgcaccagat
      961 cgagggtgcg gccatggacc gagagtaggg cggtctgcgg cagcgaccag ccgaggcgcg
     1021 ccgcggcgag gctgaatgcc gagctcgccg ggacgacgag catctcgcgg gcgtcgacgc
     1081 ggcgtgcgag cgtggcgccg acgccataat ggaacgggtc gccggaggcg agcacgcaca
     1141 cctggcgtcc gcgatggcgg agcacttcgt cgccggcgcc gtcgaacggg ctcggccagg
     1201 gccgcgccgc gccgcggatc aatggcgccg caaggctcaa gtgccggcgc ccgccataga
     1261 cgatttccgc cgcgccgatg agcccgcgcg ccgccgcgct tagcccgtcg acgccgtcct
     1321 cgccgatgcc gacgatggac agccagcgcg gcgatgcggc agtctcgcgc gcgatcgcgt
     1381 cagggagcga catgccacgc gtcctcattc tcggcggcac cgcggaggcg cggatgctcg
     1441 cggtgcggct ggcgggccgc cccgacctcg aggtcacgct gtcgctcgcc ggccgcaccg
     1501 cctcgcccgc gccgcagccg gtgccggttc gccgcggcgg ttttggcagc gccgcaggcc
     1561 tcgcggacta tctggtcggc gagcgcatcg ccgcgctgat cgacgccacg catccgtacg
     1621 ccaacgtcat ttcggcgaat gccgtcgccg ccgcacgcga agccgatgtg cccagcgtgg
     1681 cgctgcggcg tccgccgtgg accgcggtcg ccggcgaccg ctggatcgag gtgagcgacg
     1741 cgggggaggc ggttcgcgcg ctggggcaag cgccgcgccg cgtcttcgtc gcgctcggcc
     1801 gccaggagtt ggcgccattc acgcaagccc cgcagcacca ttatctcatc cgcagcgtcg
     1861 atccggtcga tccgccgctg ccgctgccgc acgtgacata cgtgaccggc cgcgggccgt
     1921 tcagcgagcc cgacgatcgc gcgctcatga ccacgcaccg catcgatatc gtcgtcgcca
     1981 agaacagcgg cggcggcgcg acctacggca agatcggcgc ggcgcgggcg ctcggcatcg
     2041 aagtcgtcat gctgcgccgg ccgcaagcgc ccgaggcgcc cgccgtcgag accatcgacg
     2101 atgccgtggc gtggctcgct catgcgctga cctcggctgc ggcgcgcggg gtgtaaacga
     2161 gcggcgagcg ccctctgcgg gcgatcaccc gcgtttcgcg cgagccgacg atgacgagcg
     2221 tcgccatgtc ggcgctcgct gtatcggcgg cggcgagcgt caccacgctc acttgctcgt
     2281 ccgcgcgccc gaccgcgcgg ccgaggacga ccggcgttgc gggcggcagg tgccggcgca
     2341 aacgctcgat ggtggcgccg aactgccacg gccgcgcccg cgaaaccgga ttgtaaagcg
     2401 cgatgacgaa gcccgcggtc gcggccgcgt cgagccgccg ctcgatcagc tcccacggct
     2461 tgagattgtc ggacagcgac agcgcgcaga aatcgtggcc gagtggcgcg ccgatgcgtg
     2521 cagcgacggc gagcatcgcg gtaatgcccg gtatgatctc gatgtcgagc gcacgccagc
     2581 tcgccggtcc ggcttcgatc tcctcgcaca cggccgcggc catggcgaac actcccggat
     2641 cgccgccgga aacgaccgcg acgcgcgccc cttgcgcggc gtgatcgagc gccgcggccg
     2701 cgcgcgcgcg ttcctcgcgg ttgtcagaag cgtggcggct ctgcccggcg cgcgccggca
     2761 cgcggtcgag atagggcacg tagccgtaga gcgcatccgc ggccgcgagc gccgcggcag
     2821 cctccgaagt gaggtagcgg gcatcgcccg gacccaatcc gacaacggcg agatgcccgc
     2881 tcacggccgt ccctcccagc cgggcaccag caccacggcg aaatacggcg cctcgtcgtc
     2941 gggcttggcg ctgagcggca tcatgaccgc gtcggccatg gtgccgtgct cgacgtagat
     3001 ggcgcggggg aggcggccgc tccgctcgag cgcgcggcgc agtttcggca gatggcggcc
     3061 gaccttcatg accacggcgg catcggcctc gccgaggcgc cgcgccaact cggcttccgg
     3121 cagcgttgcc ggcagcacgg tgaatacgtc atcgccttgg gcgatcggca tccccgccgc
     3181 cgaccagcac ccggacatgc cggtgacgcc ggcgacgatc tcggccgtaa aacgcggcgc
     3241 cagccgcgca tgcagatgca tgtaggagcc gtagaacagc ggatcgcctt cgcagatcac
     3301 ggcgacggtg cgcccggcct cgaggtgcgc ggcgagcgtc gcggccgctc cgtcgaagaa
     3361 atcgcggatc gcatcgcggt agcgatcgct gcacttcggc agctcggtcg tgaccggata
     3421 aaggagcggc agctgcgttg cgccgttgcg cagatgcggc gccgcggtag cgagcgaatg
     3481 gctggcgtgt ccggccttgg cgaaataggc gatcacgtcg gcttcgccga gcgcacgcat
     3541 cgccttgagg gtcatcagct cgggatcgcc cggcccgacg ccgacgccga tgagttttgc
     3601 cgcgctcaca ggccgggcct cgccagcgca ttcactgccg ccgcggtcat ggcgctgccg
     3661 cccatgcgcc cgcgcacgat gaggaatggt acgccgcgcg gattgctcgc cagcgcctcc
     3721 ttcgcttcgg cagcgccgac gaacccgacc ggaatgccga ggatcgcggc cggtttcggc
     3781 gcaccggcgt cgagcaggtc gaggaggcgg aacagagccg ttggcgcatt gccgatggcg
     3841 accacggcgc cggcgagtcg atcgagccac agatcgagcg ccgccgccga gcgcgtgttg
     3901 ccgagctttt ccgcaagcgc cggcacgcgc ggatcgttca aggtgcagat caccgcgttg
     3961 cccgccggga gccgcgcgcg cgtcaccccg tgcgccacca tctctgaatc gcacaggatc
     4021 gaagccccag ccgcgagcgc ctcgcgcgcc gccggcacca ggccggctcc gaacgcgatg
     4081 tgccgtgccg cctcgaccac gccgcaggca tggatcatgc gcaccgcgac ctcggcttcg
     4141 cccgccgaga agcgcgcgag atcggcctcg gcgcggatga tggcgaacga gcgctggtag
     4201 atcgccgcgc cgtcgcgcag atatgccgcg ggctcagaca tggccgctgt cgccggttcg
     4261 cgtgcgcgcg ctgcgcgcga tcgccgcggg caattcgtcc gccgacacca cggcgtgcgg
     4321 gatatcgagc gctgagccgt cggcgatgag cgcgcatcct tcgggcgtac cgacgacggt
     4381 cagcgccgcg gcccgaggat aggcgcagcc cttggcgcaa ccggaaacgt ggatcgtgaa
     4441 cgaccggtcg agaagcggcg ctgctgtcgc ggcgatcgcc ggcgccatgg cgcgggcggc
     4501 gatgtgcgcg gcggcgcaga ccggcgctcc ggcacaggcg atgacg
//
LOCUS       DATMQB010000186         4227 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_367621, whole genome shotgun sequence.
ACCESSION   DATMQB010000186 DATMQB010000000
VERSION     DATMQB010000186.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4227)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4227)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4227
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_367621"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2506)
                     /locus_tag="VNY79_05710"
     CDS             complement(<1..2506)
                     /locus_tag="VNY79_05710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-related protein"
                     /protein_id="HWX71974.1"
                     /translation="MPISFSPATNRDGRARGAGVTAVLGPTNTGKTHLAIERMLAHSS
                     GLIGLPLRLLAREVYTRAVERVGADAVALVTGEEKIKPPNPRFWVATVEAMPRDLDVA
                     FLAVDEIQVASDFERGHVFTDRMLHRRGREETLVLGAATMRPIVERLLPGASLVSRPR
                     LSQLTFAGEKKLTRLPRRSAVVAFSAEEVYAIAELIRRQRGGAAVVLGALSPRTRNSQ
                     VALYQSGEVDYLVATDAIGMGLNLDVDHVAFASDRKFDGYQFRKLSPSELAQIAGRAG
                     RATRDGTFGTTGRCPPFETELAQALESHTFEPVKIVQWRNTDLDFSSVGALQAALAAT
                     PTDTALTRAPVAEDILVLDHAARDDDVRAMIGTPADVERLWDVCQIPDYRKIAPATHA
                     ELVVTIYGFLMREGRIPTDWFARQIAQADRADGDIDTLSTRIAHIRTWTFAANRPDWL
                     ADPEHWQEVTRGVEDKLSDALHERLTERFVDRRTSRLMRRLRENAMLEPEINKTGEVV
                     VEGHGIGRLDGFVFVPEASSGGSEAKALQNAAQKALAGEISARAARLAEAPAEQFVLA
                     TDGTVRWTGAPVGKLVAGEEVLRPRIRLIADEHLTGAPRDAVEARLDRWVKSYVEKLL
                     GPLFTLGTAADVSGIARGVAFQLIEALGVLDRQRVADDVKGLEQPERAILRKYGMRFG
                     AYHIYLPLLLKPAPRALAVQLWALVHSGPESKGVEELLQLAASGRTSIPANREVDAVL
                     YRIAGYRLCGDRAVRVDILERLADLIRPALAWREGAAAPRPSGAIAGGGFTITNTMTS
                     LTGASGEDFASILRSLGYRMDRRPKPPEPAPPLAEQQ"
     gene            complement(2852..3730)
                     /locus_tag="VNY79_05715"
     CDS             complement(2852..3730)
                     /locus_tag="VNY79_05715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3108 domain-containing protein"
                     /protein_id="HWX71975.1"
                     /translation="MSLLSKPIARGAGATAFAATVCVTATVLAADAARVAAAQGRLEA
                     EYTASVAGIPIGRGNWVIDISEDQFTAAASGATTGILKFFTGAHGVGASRGVVNAGQP
                     VPTNYSATIDYDKKIDDVRIALSSGNVKDYTVEPPLPPHPDRIPVSDADRHGVVDPMT
                     STLNSAAGSGDPVSPEACNRKIAVFDGRLRYDLRSEFKRIESVRAERGYQGPAVVCAV
                     YFTPISGYVPDRPAIKYLMGLRDAEVWLAPISGTRVLVPFRFSLPTPIGLGLLQAKQF
                     VSVAQPPRSNAAARTQ"
     gene            4016..>4227
                     /gene="rpmB"
                     /locus_tag="VNY79_05720"
     CDS             4016..>4227
                     /gene="rpmB"
                     /locus_tag="VNY79_05720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HWX71976.1"
                     /translation="MSWRCELTGKTRQIGHRVSHSNRKTKRRFLPNLLNVTLMSDSLG
                     RSVRLRISANALKTVDHRGGLDAFLLA"
BASE COUNT          711 a         1369 c         1459 g          688 t
ORIGIN      
        1 cctgttgctc cgccaaaggg ggagcgggct cgggcggttt cgggcggcga tccatgcggt
       61 agccgaggga gcgcaggatc gaggcgaagt cctcgcccga ggcgccggtc agcgaggtca
      121 tggtgttggt gatcgtgaaa ccgcccccgg cgatggcgcc tgacggcctc ggcgcggctg
      181 cgccttcgcg ccacgccaga gccgggcgga tcaaatcagc aaggcgttca agaatatcca
      241 cgcgaacggc acggtcgccg cagagccgat aaccggcgat ccggtagagc actgcgtcga
      301 cctcgcgatt ggccggaatg gacgtgcgcc cgctggcggc gagctggagc aactcctcga
      361 cgcccttgct ctccggtccg gaatggacca gcgcccagag ctggactgcg agcgctcgcg
      421 gcgccggctt gagcaggagc ggaaggtaga tgtgataggc gccgaagcgc atgccgtatt
      481 tgcgcaatat cgcccgttcc ggctgttcca gccccttcac gtcgtcggca acccgctggc
      541 ggtcgagaac gccgagcgcc tcgatcagct ggaaggcgac accgcgggca atgccgctca
      601 cgtcggccgc cgtgcccagt gtgaacagtg gaccgagcag cttttcgacg tacgacttca
      661 cccagcgatc gagccgcgct tccaccgcgt cccgcggcgc gccggtcaga tgctcgtcgg
      721 cgatgaggcg gatgcgcggg cgcaagactt cctcgccggc gaccagcttg ccgacggggg
      781 cgccggtcca gcggaccgta ccgtcggtcg cgagcacgaa ctgctcagcc ggcgcttcgg
      841 caagacgcgc ggcgcgcgcg ctgatttctc ccgccagcgc cttctgcgcg gcgttctgca
      901 acgccttggc ttccgatcca cccgacgagg cttcgggcac gaagacgaag ccgtcgagcc
      961 ggccgatgcc atgcccttcg acgacgacct cgccggtctt gttgatctcc ggctcgagca
     1021 tcgcgttttc gcgcaggcgc cgcatcagcc tgctggtgcg gcggtcgacg aagcgttcgg
     1081 tcaagcgctc gtgcaaggcg tcggagagct tgtcctcgac cccgcgcgtg acctcctgcc
     1141 aatgttcggg gtcggcgagc caatcgggac ggttggccgc aaatgtccag gtcctgatgt
     1201 gggcgatgcg cgtcgacagc gtatcgatgt cgccgtcggc tcggtccgcc tgcgcgatct
     1261 ggcgggcgaa ccagtcggtc ggaatccggc cctcgcgcat gagaaagcca tagatggtga
     1321 cgacgagttc ggcatgcgtc gccggcgcaa tcttgcggta gtcgggaatc tggcaaacat
     1381 cccacaggcg ctcgacgtcg gcgggcgttc cgatcatggc gcgcacgtcg tcatcgcgcg
     1441 cggcatggtc gaggacgagg atgtcttcgg caaccggtgc gcgggtgagc gcagtgtcgg
     1501 tcggcgtggc cgcaagcgcc gcctgcagcg caccaacgga ggagaagtcg agatcggtat
     1561 tgcgccactg cacgatcttc accggctcga aggtgtgcga ctccagcgcc tgggcaagct
     1621 cggtctcgaa aggcggacag cggccggtgg tgccgaacgt gccgtcgcgg gtggcgcgcc
     1681 cggcacgccc ggcgatctgg gcaagctcgg aagggctgag cttgcgaaac tggtagccgt
     1741 cgaacttgcg atccgaggcg aaggcgacgt gatcgacatc gaggttgagc cccatgccga
     1801 tggcgtcagt cgcgaccagg tagtcgacct cgccggactg gtagagcgcg acctgggagt
     1861 tgcgggtgcg cggcgagagc gcgccgagca ccaccgccgc gccgccgcgc tggcggcgga
     1921 tcagttcggc gatcgcgtat acttcttcgg ctgagaacgc gacgaccgcc gatcgccgcg
     1981 gcaggcgcgt cagcttcttc tcgccggcga aggtgagctg ggagagccgc ggtcggctta
     2041 caaggctggc gccggggagg agccgctcca cgatcggccg catcgtggcc gcgccgagca
     2101 cgagcgtctc ctcgcggccg cgccggtgca gcatgcggtc ggtgaagacg tggccgcgct
     2161 cgaaatcgga ggcgacctgg atttcatcga ccgcgagaaa cgccacgtcg agatcgcgcg
     2221 gcatcgcttc gaccgtggcg acccagaagc gcgggtttgg cggcttgatc ttttcttcgc
     2281 cggtgaccag cgccaccgca tcggccccca cccgttcgac cgcacgggtg tagacctcgc
     2341 gcgccaggag ccgcagcggc agtccgatca gccccgagga atgcgccagc atccgttcga
     2401 tggcgagatg tgtcttgccg gtattggtcg gccccagcac ggcagtgacg ccggcgccgc
     2461 gggcgcgtcc gtcccggttg gtcgctggag agaaggaaat cggcatcgaa gacccggtta
     2521 ccgcgcaggc ggcggcctct cctgtatcac aacatgacgc tggaaaggcc tgtgcttaac
     2581 gtgtggaacg agtctcgaac gaatcgcggc cgaatcggcg actcgcggcc tgttcgaatt
     2641 cgttcaccgc gacatatgga agtaagcgtg agacgtaata ccacatcgag ggttttgcgc
     2701 ccggccagcg tgtcgttttc gtgccgaaag tgttaacagt gtcgacgagc aggattccac
     2761 ggcgagtcaa gagccatgct cctgtggatt gcggggacag cggcgcgagt gccgagcatg
     2821 aggcccctgc cgcactgcgc agccgcgtgg gctattgtgt ccgcgcggcc gcattcgagc
     2881 gcggcggctg cgcgaccgac acgaactgct tcgcctgcag caggccgagg ccgatcggcg
     2941 tcggcagcga gaagcggaac ggcaccagta cacgcgtgcc tgagatcggc gccagccaga
     3001 cctcggcgtc acgcagcccc atgagatatt tgatggcggg ccgatcaggc acgtaacccg
     3061 aaatcggcgt gaaatacacg gcgcaaacga ccgcgggacc ctgatacccg cgctccgccc
     3121 tgacggactc gatgcgcttg aattcgctgc gcaggtcgta gcgcaagcgg ccgtcgaaaa
     3181 ccgcgatctt acggttgcag gcctcgggcg aaacgggatc tccgctgccg gccgcggaat
     3241 tgagcgtcga tgtcatcggg tcgaccacac cgtggcggtc ggcgtcgctc accgggatgc
     3301 gatcgggatg cggcggcagc ggcggctcga ccgtataatc cttcacattt ccgctcgaca
     3361 gcgcaatgcg gacgtcgtcg atcttcttgt cgtagtcgat ggtcgcgctg tagttagtcg
     3421 gcaccggctg cccggcgttg acgacgccgc gcgaggcgcc gacgccgtgg gcgccagtga
     3481 agaacttcag gatgcccgtt gttgcgccgc ttgccgcggc cgtgaactgg tcctcggaaa
     3541 tgtcgatgac ccagttgccg cggccgatcg ggatgccggc aacgctggcg gtgtactcag
     3601 cttcgagccg gccctgcgct gctgcgacac gagccgcatc ggcggcaagg acggtcgcag
     3661 tgacgcaaac cgtggccgcg aaggcggtgg cgccggcacc gcgtgcgatc ggcttcgaca
     3721 gcaaggacaa caatggagat ggttccctca gcccggaagt gacggccggc gcaaatcgcg
     3781 atggccggtt cgccatgcgc gcgtaaccag caggtctccg catccgtgtt gtcgaaaaat
     3841 gcgtcgtttc tgtgatttac gcgggttttg cgcacgggga aaacccgggt cggcggcgat
     3901 tccggcgaca ttgcttgacg ctctcaaggt cgctgactat aggtccgcgc aacctcccgc
     3961 ccacatcgtc cgtcgctcgg cgctggaccc gcggagaatg cgaggaattg cagccatgtc
     4021 atggcgttgc gagctgaccg gaaaaacgcg ccagatcggg caccgcgtga gccattcgaa
     4081 ccgcaagacc aagcggcggt ttctgcccaa cctgctcaac gtcacgctga tgtccgattc
     4141 actcggccgc tcggtgcgcc tgcgaatttc cgccaacgcg ctcaagaccg tcgaccaccg
     4201 cggcgggctc gacgctttcc ttctggc
//
LOCUS       DATMQB010000187        10703 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_678499, whole genome shotgun sequence.
ACCESSION   DATMQB010000187 DATMQB010000000
VERSION     DATMQB010000187.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10703
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_678499"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..993)
                     /locus_tag="VNY79_05725"
     CDS             complement(<1..993)
                     /locus_tag="VNY79_05725"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtC"
                     /protein_id="HWX71977.1"
                     /translation="MKDAPAAKQGVQPRHRVYRAPTFMPLWALIGGAAVIALIGTYPY
                     YGSNAYVLSLLGKFLCFAIFALSIDLIWGFTGILSLGQAVYFGIGAYFVALSLKINYA
                     MTHPTRYGGNFPDFMEWNGLTELPGFMTPLISTPFAVLCALVVPTLLALLFGVITFKR
                     HIYGVYCAVITLAESLILQDFIIEYQAYTGGFNGITDYSNYATPAFLWVILAVVVVFF
                     VAARALTHSRVGTVLKSIRDNDVRAEFMGYNVANYRIFVFCASAFMAAAAGALYAAWV
                     GIVSFLDAGPVFSIEGVIWTAVGGRGTIIGPFIGAFLVKGAEFFLSGVLASWWQI"
     gene            complement(1036..1908)
                     /gene="urtB"
                     /locus_tag="VNY79_05730"
     CDS             complement(1036..1908)
                     /gene="urtB"
                     /locus_tag="VNY79_05730"
                     /inference="COORDINATES: protein motif:HMM:TIGR03409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0033221 - ATPase-coupled urea
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0015840 - urea transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urea ABC transporter permease subunit UrtB"
                     /protein_id="HWX71978.1"
                     /translation="MLQSIITQFLSGFSVVAILVIAALGLAIIFGVAGVINMAHGELI
                     MVGAYTAAVVGKLGGNTFLAIPVAFIVVGLLGLIIERGVIQWIYDRPLETLLATWGVG
                     IILQVVIKLIFGPELYYVGAPKILEGGFRVIGRLPFPWYRLFLIVMALLLLLLVFYVI
                     FKTDFGLKVRAVRRNRAISGCLGIDTARIDMTIFAFGSGLAGIAGAVLAPIKSVSTAM
                     GFPYAVDSYMVLVLGGVGSLWGVLTGGALIGEAETILSFIFNNVIGRLLVFLFIVIII
                     RIVPRGIFGYSERR"
     gene            complement(2002..3315)
                     /locus_tag="VNY79_05735"
     CDS             complement(2002..3315)
                     /locus_tag="VNY79_05735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009450473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX71979.1"
                     /translation="MSITRRRILKSTGGGLAGVLASGVAPYGFVRNIVKAAESDTIKV
                     GILHSLSGTIAIIESSLHNAELLAIEEINAKGGVLGKKLQPVVEDPQSLVQVFAEKAK
                     KLLLDDKVVAVLGCYTSASRQSVLPVFEENNGVLLYPTLYEAQECSKNCFYTGAVPNQ
                     QLDDFVPWIIKTLGRKKFYLIGANYIYPKETNREVKALLQKHGGTTVAEEYSPLGSTE
                     FSTNINKIASSGADIVFSDLVGDQIVAFYKQFREFGITAKDIPICTPITTEQEIAAMG
                     AENAIGHYTSFNYFQSVDTPQNKSFVDRYKAKYGKDAVTNAVMEAAYFQTYFLAQAIA
                     KVKSTDADALIFEGLPGQEFQAPQGKVKIDEKNHHTWLWARIGQANEKGQFDVVWKSE
                     DWIRPQPWVPYLYPNKSCDFTDKRVLDRVKKPWSAEKNRSGTIDL"
     gene            3657..4118
                     /gene="ureE"
                     /locus_tag="VNY79_05740"
     CDS             3657..4118
                     /gene="ureE"
                     /locus_tag="VNY79_05740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018043954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreE"
                     /protein_id="HWX71980.1"
                     /translation="MANEVLRIERIVGEAADPALHDALHRLEHAGRLEYVTLGADDML
                     RRRQRVTTDRGNECAIALAREDKLFDGAVLVLDHDRAVVVRAAATSWLAVAPADVAAA
                     IELGYCSGNMHWRVAFAGSVLRIAMNGPKADYLARLAPLIAAGRIKEVGDG"
     gene            4111..4788
                     /locus_tag="VNY79_05745"
     CDS             4111..4788
                     /locus_tag="VNY79_05745"
                     /inference="COORDINATES: protein motif:HMM:NF013858.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory UreF family protein"
                     /protein_id="HWX71981.1"
                     /translation="MDSRALLAALQHADSFFPSGTVSFSWGLEALRADGLVRTAEDVT
                     QFIAALLRHRWATGDRPILAAAHAAGDDLEAVRALDQLQEALALAQELRTGSRRMGAA
                     LLGVHARLGTRNAAGYRAWVLADRAPGHVAVMQGLLWRGIGLDLEVALPVAAHGFCVG
                     LIGAALRLGLIGHVEGQRCLAGLHGLIADVLESPLPGLDEISTFAPACDIAFMRHEVQ
                     PGRLFAN"
     gene            4810..5505
                     /locus_tag="VNY79_05750"
     CDS             4810..5505
                     /locus_tag="VNY79_05750"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009039 - urease activity [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0043419 - urea catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit gamma"
                     /protein_id="HWX71982.1"
                     /translation="MLLTPTEMERLVIFTAAELARKRRARGVKLNHPEAVAFIADEIL
                     EGARDGRSVADLISFGATLLTTDDVLPGVMDLMPMIQVEATFPDGTKLVTVHDPIRPG
                     TRPYKMERTPGELIVPDEEVEINAGRREVMLKVLNTGDRPVQVGSHYHFFETNPALEF
                     DRSAAFGMRLAVPAGTAVRFEPGESKDVTLCEFGGSGELGGLNSLTDGSRHAPAVKEQ
                     ALRRARERGFRGA"
     gene            5511..7223
                     /gene="ureC"
                     /locus_tag="VNY79_05755"
     CDS             5511..7223
                     /gene="ureC"
                     /locus_tag="VNY79_05755"
                     /EC_number="3.5.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020095175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009039 - urease activity [Evidence IEA];
                     GO_function: GO:0016151 - nickel cation binding [Evidence
                     IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease subunit alpha"
                     /protein_id="HWX71983.1"
                     /translation="MGKMHRRDYAAMYGPTTGDAVRLGDTSLLAEIEHDHAVKGDECL
                     HGGGKTLRDGMGLAAGYDSAAGALDMLLSNAVLIDPVLGIVKGDLGVKDGRIVAVGKA
                     GNPAIMDGVHPALICGAATTVRDCEGLIATPGGIDVHVHFDSAALCEHAISSGITTMI
                     GGSLGPLTVGIDCGGAWNVGKMLQAVEQWPINFAFLGRGNSYKPKSLIDQIEGGVAGM
                     KLHEDWGSMPAAIDCCLKVADDADIQVQLHTDTLNESGFLEQTLAAIGGRSIHMYHAE
                     GAGGGHAPDIIRVAGEMNCLPSSTNPTNPYTVNTFDEHLDMIMVCHHLNPAVPEDVAF
                     AESRIRAGTIAAEDVLHDIGAISMLGSDSQGMGRIHEVICRTWQLASKMRDQRGRLPT
                     ETSRIGDNERIKRYIAKYTINAARTFGIDAHIGSLEPGKLADVVVWRPAFFGIKPELV
                     IKGGFIVWSAMGDSAASLMTCEPMAMRPQWGAFGRAKQALSVSFVSRAAVERDIAGRL
                     GLEKTILPVGGVRKLTKRDMLHNDACPQIRVNPETFEVFVDGELATCEPATVLPLTQR
                     YMLR"
     gene            7229..7852
                     /gene="ureG"
                     /locus_tag="VNY79_05760"
     CDS             7229..7852
                     /gene="ureG"
                     /locus_tag="VNY79_05760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015687027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016530 - metallochaperone activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreG"
                     /protein_id="HWX71984.1"
                     /translation="MGDRRLGPARVGIGGPVGAGKTALIEALLPRLRARNIDVAVVTN
                     DLVTREDAERLQRGGLIEPSRVIGVETGACPHTAIREDPTLNGEAIERLRLAFPGLDL
                     VLVESGGDNLASTFSLDLVDYWLFVIDVADGDDIPRKRGPGIVSCDLLIINKIDLAPY
                     VGADVAGMQRDSLGVRSGKPVLLTNCRSGEGVDAVIDRIAHDALLLA"
     gene            7891..8775
                     /locus_tag="VNY79_05765"
     CDS             7891..8775
                     /locus_tag="VNY79_05765"
                     /inference="COORDINATES: protein motif:HMM:NF013899.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urease accessory protein UreD"
                     /protein_id="HWX71985.1"
                     /translation="MPATDAAPTPAHTAAHEARGRCETRLEFAVDAEGRTYLASHFAS
                     YPHHLTRAFYLDRAAPQTATVYLQSLSGGLTQDDRVSMRISTTGGAVAHVTTQAATKV
                     HSMERGFALQQVSLAALAHSHLEFLADPTICFPHSRLVAKTDLCVATEASAIVGDSYM
                     WHDPRGADPMAFDALTVETTIRRPDGRLLAIDRGRLTSGHGLAGNPALLGPCRALGTL
                     FAVGRGCSDAAVLAAVRTALADLRGVYVGVTQLPAGAGLWLRVLAIDGAALRTAMECA
                     WRQCHLGMLGWACDRRRK"
     gene            9245..9943
                     /locus_tag="VNY79_05770"
     CDS             9245..9943
                     /locus_tag="VNY79_05770"
                     /inference="COORDINATES: protein motif:HMM:NF012257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HWX71986.1"
                     /translation="MLTQTAIRASAPPTYFAAPPVDRVVNSRPPRDLLATILHLIGAV
                     VSYRRNTELFGENEPADYLYKVVSGGVRTYKILSDGRRQISAFYLPRDMFGLEFAGEY
                     SCSAEAISDAKVLVVNRKTLTALAGRDAEIARELFVLTAHELQRVHKRVLLLVKTAQE
                     RVASFLVEMAERGSAGNAIELPMSRQDIADYLGLTIETVSRTLTSLETCAAIEVSSRR
                     IVVRNRSALNRMNG"
     gene            complement(10005..>10703)
                     /locus_tag="VNY79_05775"
     CDS             complement(10005..>10703)
                     /locus_tag="VNY79_05775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004108845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HWX71987.1"
                     /translation="GLDISTAVYEWNYAAQMIAIRAAEAEGEHDRERIERDVFAERFL
                     IKRPLLQALEPDAAGAPVLLIDEIDRTDEAFEAFLLEVLGDFQITIPEMGTVKAAHPP
                     VVVITSNRTREVHDALKRRCLYHWVGYPSAERELAIVRTKVPDVGKKLSEQVVAFVQA
                     LRRQDLFKSPGVAETLDWAAALSELDVVALDPATVSDTLGVLLKYQDDIARLEGSKVK
                     ELLDEVKSELRAAE"
BASE COUNT         1901 a         3563 c         3442 g         1797 t
ORIGIN      
        1 gatctgccac catgaggcaa gcacgccgct gagaaagaac tcggcgccct tgacgaggaa
       61 agcgccgatg aacgggccga tgatcgtgcc gcggccgccc accgcggtcc agatcacgcc
      121 ctcgatcgag aacacaggcc cggcgtcgag gaaggagacg atcccgaccc aggcggcata
      181 gagcgcgccg gccgccgcgg ccatgaacgc ggaggcgcag aacacgaaga tgcggtagtt
      241 ggcgacgttg tagcccatga attccgcgcg cacgtcgttg tcgcggatcg acttgagcac
      301 ggttccgacg cgcgagtgcg tcagcgcccg cgcagcaacg aagaacacga cgacgaccgc
      361 gaggatgacc cagagaaacg cgggcgtggc gtagttcgag tagtcggtta tgccgttgaa
      421 gccgccggta taggcctgat actcgatgat gaagtcctgg aggataagcg actcggcgag
      481 cgtgatcaca gcgcaataga cgccgtagat gtggcgcttg aaggtgatca ccccgaacag
      541 cagcgcgagc agcgtcggca ccaccagggc gcagaggacg gcgaacggcg tgctgatcag
      601 cggcgtcatg aaaccaggca gctcggtcag gccgttccac tccatgaagt cggggaagtt
      661 gccgccatag cgcgtcgggt gggtcatcgc gtagttgatc ttgagcgaca aggcgacgaa
      721 gtaggcgccg atgccgaaat agacggcttg gccgaggcta agaatgccgg tgaagcccca
      781 gatcaggtcg atgctgagcg caaagatcgc aaagcagagg aacttgccga gcagcgacag
      841 cacgtaggcg ttcgagccgt aataaggata cgtgccgatc agggcgatga ccgcggcgcc
      901 gccgatcagc gcccagagcg gcatgaacgt aggcgcccga tagacgcggt gccgcggctg
      961 cacgccttgc ttcgccgccg gcgcgtcctt catcccagga tctcgaaccg cgacctctgc
     1021 catctcgccc gtccgtcagc gccgttcact gtagccgaaa atgcccctcg gaacgatgcg
     1081 gatgatgatc acgatgaaaa ggaacaccag cagtctgccg atcacgttgt tgaagatgaa
     1141 agaaagaatt gtctccgcct cgccgatcaa ggcgccgccg gtcaacacgc cccacaaact
     1201 cccgacaccg ccaagcacga gcaccatgta ggagtcgacc gcgtacggga aacccatggc
     1261 ggtcgagacc gacttgatcg gcgccagcac cgccccggcg atccctgcaa gacccgagcc
     1321 aaaggcgaag atcgtcatgt cgatccgcgc cgtgtcgatg ccgaggcagc ccgagatcgc
     1381 ccggttgcgg cgcaccgctc gcaccttgag cccgaagtcg gtcttgaaaa tcacgtaaaa
     1441 gaccaggagg agcagcagga gcgccatcac gatcaggaag agccggtacc acggaaatgg
     1501 cagccggccg atgacgcgga agccgccttc gaggatcttc ggcgcgccga catagtagag
     1561 ttccggtcca aagatgagct tgatcaccac ttgcaggatg atgcctacgc cccaggtagc
     1621 gagcagtgtc tccaatggtc gatcgtagat ccattggatg acgccgcgtt cgatgatcag
     1681 cccgagaagc ccgaccacaa taaaggcgac aggtatcgcg aggaaggtat tgccgccgag
     1741 cttgccgacc acggcggctg tataggcgcc gaccatgatc agctcgccgt gagccatatt
     1801 gatcacgccg gcaacgccga agatgatggc cagacccaaa gctgcgatca ccaggatcgc
     1861 gactacgctg aagccgctga gaaactgggt gatgatcgac tgaagcattc cccgcctgcc
     1921 ccgaagggct cgcctctttc tcgtcgtccg cgtttgcggg ggcgcccatc ggcgcccccg
     1981 caaaaggttg ccgcccgccg gttacaagtc aatcgttccc gagcggttct tttccgcgct
     2041 ccaaggcttc ttcacgcgat cgagcacgcg cttgtcggtg aagtcgcagg acttgttcgg
     2101 atagagatac ggcacccacg gctgcgggcg gatccagtct tccgacttcc acaccacgtc
     2161 gaactggccc ttctcgttcg cctggccgat gcgggcccac agccaggtgt ggtggttctt
     2221 ctcgtcgatc ttgaccttgc cctgcggcgc ctggaactcc tgtcccggca gtccctcaaa
     2281 gatcagggcg tccgcgtcgg tcgacttaac cttcgcgatc gcctgggcga ggaagtaggt
     2341 ctggaagtag gcggcctcca tcaccgcgtt ggtcaccgcg tccttgccgt atttggcctt
     2401 gtagcggtcg acgaacgact tgttctgcgg ggtgtcgacg ctctggaagt agttgaacga
     2461 ggtgtagtgg ccgatggcgt tctccgcccc catcgccgcg atctcctgct cggtggtgat
     2521 cggcgtgcag atcgggatgt ctttggcggt gatgccgaac tcccggaact gcttgtagaa
     2581 ggcgacgatc tggtcgccga ccaggtcgga gaagacgatg tcagcgccgc tcgaggcgat
     2641 cttgttgatg ttggtcgaga actcggtcga gcccagtggc gaatattcct cggccaccgt
     2701 cgttccgccg tgcttctgca gcagcgcctt gacctcgcgg ttggtctcct tgggatagat
     2761 gtagttggcg ccgatcagat agaatttctt gcggcccagc gtcttgatga tccagggcac
     2821 gaagtcgtcg agctgctggt tcggaaccgc gccggtatag aagcagttct tgctgcattc
     2881 ctgcgcttcg tagagcgtcg gatagagcag cacgccgttg ttctcctcga acaccggcag
     2941 caccgactgg cggctcgccg aggtgtaaca gccgaggacg gcgacgacct tgtcgtcgag
     3001 cagcagcttc ttcgcctttt cggcaaagac ttggacgagc gactgcgggt cttccacgac
     3061 cggctgaagc ttcttgccga gcacgccgcc cttggcgttg atctcttcga tcgccagcag
     3121 ttcggcgtta tgcagcgagc tctcgatgat ggcgatggtg ccgctcagcg aatggagaat
     3181 tccgaccttg atggtgtcgc tctcggccgc cttcacgata ttgcgcacga agccgtaggg
     3241 tgcgacgccg cttgccagaa cgccggccaa acctccgccg gtactcttca ggattcttct
     3301 tcgggtgatg ctcatgactt ccctcctgtt ggctaagcca aaaacgcaaa acgccccacc
     3361 ttctcccctc agggagatga cggtggggcg cccatgcccg tatatcagcg gcaccactgc
     3421 cgcaaagtat gaacggaaat ccgcgctcga ccaccccggg agcgggaaaa tccgttcgtt
     3481 gacgcaagca taagccaaat gccgggtgtc gcgcaagacg aaccgcgcgc cgttgcgacc
     3541 gaaaatcggg cattttcagt acgtagcgag cagcgagctg ggccgcggcc gtgccgcgcc
     3601 agggccgcgg cgatgtgcta tttcactgat gccggccggc atcgccgggg gagacgatgg
     3661 cgaacgaggt gctgcgcatc gaacggatcg tcggtgaggc cgccgacccc gcgcttcacg
     3721 acgcattgca ccggctcgag catgcgggac ggctggaata cgtgacgctg ggcgccgacg
     3781 acatgctgcg ccggcgccag cgcgtcacga ccgaccgggg caacgaatgc gccattgcgc
     3841 ttgcccgcga agacaagctg tttgacggcg ccgtgctggt gctcgatcac gaccgcgcgg
     3901 tggtcgtgcg ggccgcggca acttcctggc tcgctgtcgc gcctgccgac gtcgcggcgg
     3961 caatcgagct cggttattgc agcggcaaca tgcattggcg ggtcgccttt gccggttccg
     4021 tgctgcgcat cgccatgaac ggccccaagg cggactatct ggcccgtctc gcgccgctca
     4081 tcgctgccgg ccgcatcaag gaagtcggcg atggatagcc gcgctcttct cgccgccctg
     4141 cagcacgccg acagcttctt tccgagcggc accgtttctt tttcctgggg actcgaagcg
     4201 ctgcgcgcgg acggcctggt ccgcacggcg gaggacgtca cccagttcat cgccgcgctg
     4261 ctccgccacc gctgggccac cggcgaccgg ccgatattgg cggccgcgca cgccgccggc
     4321 gatgatctgg aagcagtccg cgcgcttgat caactgcagg aggcgctggc gctggcgcag
     4381 gagttgcgca ccggatcgcg gcgcatgggc gccgcgctcc tcggcgtcca cgcgcggctc
     4441 ggcacccgca acgccgccgg ctaccgcgcc tgggtgcttg ccgatcgcgc gccgggccac
     4501 gtggcggtga tgcagggcct gttgtggcgc ggcattggcc tcgatcttga ggtcgcgctc
     4561 ccggtcgccg cgcacggctt ctgcgtcggg ctcatcggcg cagcgttgcg cctcggcctc
     4621 atcggtcatg tcgagggcca gcgctgcctc gccggactgc acggtttgat cgcggacgtg
     4681 ttggaaagcc ccctgcccgg cctcgacgag atttcgacct tcgcgccggc gtgcgacatc
     4741 gcgttcatgc gccacgaagt gcaaccgggc cgtttgtttg ccaattaacc gacgacgaga
     4801 gaggttcgca tgctgctgac cccgaccgaa atggagcgac tggtgatctt caccgccgcc
     4861 gagcttgccc gcaagcgccg ggcgcgcggc gtcaagctca accacccgga agccgtggcg
     4921 ttcatcgccg acgaaatttt ggagggcgcc cgcgacggcc gctcggtcgc cgatctgatc
     4981 agcttcggcg ccacgctgct caccaccgac gacgtgcttc ccggcgtcat ggacctgatg
     5041 ccgatgatcc aggtcgaggc cacctttccc gacggcacca agctcgtcac cgttcacgac
     5101 ccgatccgcc ccggcacacg tccctacaag atggagcgca cgcccggaga gctcatcgtt
     5161 ccggacgagg aggtcgagat caacgccggg cgccgcgagg tcatgctcaa ggtcctcaac
     5221 accggcgacc gcccggtgca ggtcggcagc cactaccatt ttttcgaaac caacccggcg
     5281 ctcgaattcg accgcagcgc cgccttcggc atgcgccttg ccgttcctgc cgggacggcg
     5341 gtgcgtttcg agcccggcga aagcaaggat gtcacgcttt gcgagttcgg cggctccggc
     5401 gagcttggcg gcctcaacag cctgaccgac ggttcgcggc acgcaccggc ggtcaaggaa
     5461 caggcgctgc gccgcgcgcg cgaacgcggc ttccgcggag cttgaaacaa atgggcaaga
     5521 tgcaccgtcg cgactacgcc gccatgtacg ggccgacgac cggcgacgcc gtccggctcg
     5581 gcgacacctc gctgctggcc gagatcgaac acgatcacgc ggtcaagggc gacgagtgcc
     5641 tgcacggcgg cggcaagacc ctgcgtgacg gcatggggct cgccgccggc tacgacagcg
     5701 ccgccggcgc gctcgacatg ctgttgagca atgccgtgct gatcgatccg gtgctcggca
     5761 tcgtcaaggg cgatctcggc gtcaaggacg gccgcatcgt cgccgtcggc aaagccggca
     5821 accccgcgat catggacggc gtccatccgg cgctgatctg cggggcggcg acgacggtgc
     5881 gcgactgcga aggcctgatc gcgacgccgg gcggcatcga cgtgcacgtg catttcgaca
     5941 gcgccgcgct gtgcgagcac gccatcagct ccggcatcac cacgatgatc ggcggctcgc
     6001 tcggcccgct caccgtcggc atcgactgtg gcggcgcctg gaacgtcggc aagatgctgc
     6061 aggcggtcga gcaatggccg atcaatttcg cctttctcgg acgcgggaat tcgtacaagc
     6121 cgaaatcgct gatcgaccag atcgaaggcg gcgtcgccgg catgaagctc cacgaggatt
     6181 ggggctcgat gccggccgcg atcgattgct gcctgaaggt cgccgacgac gccgacatcc
     6241 aggtccagct gcacaccgac acgctcaacg aaagcggctt cctcgagcag acgctcgccg
     6301 ctatcggcgg ccgctccatc cacatgtatc acgccgaggg cgctggcggc ggccacgccc
     6361 cggacatcat ccgcgtcgcc ggcgagatga actgcctgcc gtcctcgacc aatccgacca
     6421 acccgtacac cgtgaacacc ttcgacgaac acctcgacat gatcatggtg tgccatcacc
     6481 tcaatccggc ggtgccggag gacgtggcat tcgccgagag ccgcatccgc gccggcacca
     6541 tcgcggcgga ggacgtgctc cacgatatcg gcgcgatctc catgctcggc tccgacagcc
     6601 agggcatggg ccgcatccac gaagtgatct gccgtacctg gcagctcgcc agcaagatgc
     6661 gcgaccagcg cggacggctc ccgacggaga cttcacgcat cggcgacaac gagcgcatca
     6721 aacgctacat cgccaaatac acgatcaatg ccgcccgcac cttcggcatc gacgcgcaca
     6781 tcggctcgct cgagccgggc aaactcgcgg acgtcgtcgt ctggcgccct gccttcttcg
     6841 gcatcaagcc ggaactggtg atcaagggcg gcttcatcgt ctggtcggcg atgggcgaca
     6901 gcgccgcctc gctgatgacc tgcgaaccga tggcgatgcg cccgcaatgg ggagcgttcg
     6961 ggcgcgccaa gcaggcgctg agcgtaagct tcgtgtcgcg ggccgcagtc gagcgcgata
     7021 tcgccgggcg cctcggcctg gagaagacga tcctgccggt gggtggcgtg cgcaagctca
     7081 ccaagcgcga catgctgcac aacgacgcct gtccgcagat ccgcgtcaac ccggagacct
     7141 tcgaagtgtt cgtcgacggc gaactagcga cctgcgagcc ggcgaccgtg ctgccgctga
     7201 cgcagcgcta catgctgcgg tgagcgccat gggagatcgt cgcctcgggc cggcgcgcgt
     7261 cggcatcggc ggaccggtcg gggccggcaa gaccgctctg atcgaggcgc tgctgccgcg
     7321 gcttcgcgcc cgcaacatcg acgtcgcggt ggtgaccaac gatctcgtca cccgcgagga
     7381 cgccgagcgg ctgcaacgcg gcggcctgat cgagccgagc cgcgtgatcg gcgtcgagac
     7441 cggcgcctgc ccgcacaccg cgatccgcga ggacccgacg ctcaacggcg aagcgatcga
     7501 gcggctccgg cttgcctttc ccgggctcga tctggtgctc gttgaaagcg gcggcgacaa
     7561 tctcgcctcg accttctccc tcgatctcgt cgactactgg ctgttcgtga tcgatgtcgc
     7621 cgacggcgac gacattccgc gcaagcgcgg acccggcatc gtcagctgcg accttctgat
     7681 catcaacaag atcgaccttg ctccctatgt cggcgccgac gtcgccggca tgcagcgcga
     7741 cagcctcggc gtgcgcagcg gcaaaccggt actgctcacc aattgccgca gcggcgaggg
     7801 tgtcgatgcc gtgatcgatc gcatcgcgca tgacgcgctg ctgctcgctt gatcgcggcc
     7861 tcgtcaaagc gcgagcgcac cgccgagaca gtgccggcga cggacgcggc tccgacccca
     7921 gcacacaccg cggcgcatga agctcgcggg cggtgcgaga cccggctcga attcgccgtc
     7981 gacgccgagg gccgcaccta ccttgcgtcg catttcgcca gttacccgca tcacctgacg
     8041 cgcgcctttt acctcgaccg ggcggcgccg cagacggcta ccgtctatct tcagtcgttg
     8101 tcgggagggc tgacgcagga cgaccgcgtc agcatgcgga tttccacgac cggcggcgct
     8161 gtcgcccatg tcacgacgca ggccgcgacc aaggtccaca gcatggagcg cggatttgcg
     8221 ctccagcagg tcagtcttgc ggcactggcg cacagccatc tcgaattcct tgccgacccc
     8281 acgatttgct tcccgcactc gcggctcgtt gccaagacgg acctctgcgt cgccaccgag
     8341 gccagcgcga tcgtcggcga ctcctatatg tggcacgatc cgcgcggggc ggaccccatg
     8401 gcgttcgatg cgctgaccgt ggaaacaacg atccgtcgcc ccgacggccg ccttttggcg
     8461 attgaccgcg gccggctgac ctcggggcac ggactggccg gcaacccggc gctgctcggc
     8521 ccctgtcggg cgctcggcac gctcttcgcg gttggccgtg gctgcagcga cgcggcggtg
     8581 ttggcggcgg tacgcaccgc gcttgccgat ctgcgggggg tctatgtcgg cgtcacccaa
     8641 ctgcccgccg gagcggggct gtggctgcgg gttctcgcca tcgacggcgc ggcgttgcgc
     8701 acggccatgg aatgcgcctg gcggcaatgt catctcggca tgctgggatg ggcctgcgac
     8761 cggcgccgca aatgaccgta agcgcacccc ggaggatgcc tcacgcgcac ctctcggtgg
     8821 tgcatgatcg cgctggctac gcggcgatca tcgaccctcc gcgccgccag cgccgtgacg
     8881 gttggtagca gcggccggtt gatcgtttct gcggaaaccg gcgatcacgc gccctgctat
     8941 cgagtgccca tcacgcgcaa gcgcccgttc cggggcgacc cctaaacctt cgtataaggg
     9001 cactaacctt tccactcatt ccccgcatac tttcgcccag tggagggaga aattcgaccg
     9061 tcttagactg ttgcgcgtcc gaggtgacac tgtccaaagg gtcatcatga aaaactaaat
     9121 ggaacggttc gcgccgaccg gcgtcatcgc ttgcgttgac agtgcgggaa atcatccgtc
     9181 ggggcaaagg tcgccggcgc cgaccacaac ggatacgttg cgcaagacag gaaggtaatg
     9241 ggtgatgctc acgcaaactg ccattcgcgc ctccgcccca ccaacttact ttgccgctcc
     9301 accagtagac cgcgttgtca atagccggcc gccgcgcgac ttgctggcaa cgatcctgca
     9361 tctcattggc gctgtcgtgt cgtatcggcg caataccgaa ctcttcggcg agaacgagcc
     9421 cgcggactac ctgtacaagg tcgtcagcgg cggcgtgcgc acctataaga tcctcagcga
     9481 cggacgccgg cagatcagtg ccttttatct gccccgagac atgttcggtt tggagttcgc
     9541 tggcgagtac tcctgttccg ccgaagcgat ttcagacgcg aaggtgctgg tggtcaaccg
     9601 caagacgctc acagcgctgg ccggccgtga tgccgagatc gcccgcgaac tcttcgtcct
     9661 caccgcgcac gagctgcagc gcgttcacaa gcgagtcttg ctcctggtca agacggcgca
     9721 ggagcgcgtc gcgagtttcc tcgtcgagat ggcggaacgg ggctcggcgg gcaacgcgat
     9781 cgaattaccg atgtcgcggc aggacattgc cgactacctc ggcctcacca tcgagaccgt
     9841 ttcgcggacg ctgacgtctc tggaaacctg cgccgcaatc gaggtgagct cgcggcgaat
     9901 cgtggtgcga aatcgctccg cgctcaaccg gatgaacggc tagctgttta caagagccgc
     9961 cgacggcttc agggccgaag gagcgcgcgc cttgctcatc gcgcttactc cgcggcgcgc
    10021 agctccgact tgacctcgtc gagcagctcc ttgaccttgc tgccttcgag ccgggcgatg
    10081 tcgtcctggt atttgagcag cacgccgagc gtgtcggaga cggttgccgg atcgagcgcc
    10141 acgacgtcta gctcggagag cgcggccgcc cagtcgagcg tttccgccac gcccggcgac
    10201 ttgaacagat cctgccggcg caaggcctgc acgaacgcca ccacctgctc ggagagcttc
    10261 ttgccgacgt ccggcacctt ggtgcgcacg atcgcaagct cgcgctcggc gctcggatag
    10321 ccgacccagt gatagaggca gcggcgcttg agcgcgtcat gcacctcgcg ggtacggttc
    10381 gaggtgatga ccacgaccgg cggatgcgcg gccttgaccg tgcccatctc cgggatggtg
    10441 atctgaaagt cgcccagaac ctcgagcagg aacgcctcga acgcctcgtc ggtgcggtcg
    10501 atctcgtcga tcaggaggac cggcgcgccg gcggcatcgg gctcgagcgc ctgcagcagc
    10561 ggacgcttga tcaggaagcg ttcggcgaat acgtcgcgct cgatccgctc gcggtcgtgc
    10621 tcgccctcgg cctcggcggc gcggatggcg atcatctgcg cggcgtaatt ccactcgtag
    10681 accgcggtgg agatgtcgag gcc
//
LOCUS       DATMQB010000188         6629 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2231529, whole genome shotgun sequence.
ACCESSION   DATMQB010000188 DATMQB010000000
VERSION     DATMQB010000188.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6629
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2231529"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..896)
                     /locus_tag="VNY79_05780"
     CDS             complement(<1..896)
                     /locus_tag="VNY79_05780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Mur ligase family protein"
                     /protein_id="HWX71988.1"
                     /translation="MIPVTTFAGQKVAVFGLGGSGLVSASALLAGGADVVAFDDDAQS
                     VAKANAAGIPTADLRELDWSKIAALVLAPGVPLTHPSPHWSVALARKAAVEVIGDIEL
                     FCRERRRLAPGAPFVAITGTNGKSTTTALIAHLAASAGLDAQLGGNIGTAILSLEPPQ
                     AGRVHVVECSSYQIDLAPSLDSSVGILINLSEDHLDRHGTMENYAAVKARLVAGVPKD
                     GIAIIGVDDEWCRAVAAELEKSGKRVVRVSVQQPLADGVYVEEERILRAVGGKASLIA
                     EIGGIGSLRGLHNAQNAACAAAA"
     gene            complement(1108..2193)
                     /gene="mraY"
                     /locus_tag="VNY79_05785"
     CDS             complement(1108..2193)
                     /gene="mraY"
                     /locus_tag="VNY79_05785"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008963 -
                     phospho-N-acetylmuramoyl-pentapeptide-transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HWX71989.1"
                     /translation="MFYLLVELSDKLSILNVFRYITFRTGGAVITGLIFVFLFGQTMI
                     HRLRLLQGKGQPIRADGPKSHIIAKAGTPTMGGLMILSGMLVSTLLWANPANPYVWVV
                     LWVTLGFGFVGFYDDYLKVKKQTHNGFAARTRLTIEAAIALVACVALVELGHGPFSTS
                     LVFPFFKELLVNFGWAFVMFAVFIIVGAGNAVNLTDGLDGLAIVPVMIASASFGMIAY
                     LSGNAVFADYLQIHYVAGTGELAVLCGAVVGAGLGFLWFNAPPASIFMGDTGSLALGG
                     LIGTVAVATKHEIVLAVIGGLFVLEAVSVIVQVVSFRLTGKRVFRMAPIHHHFEQLGW
                     TEPQIVIRFWIVSVVLALAGLSTLKLR"
     gene            complement(2198..3643)
                     /locus_tag="VNY79_05790"
     CDS             complement(2198..3643)
                     /locus_tag="VNY79_05790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0047480 -
                     UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoylalanyl-D-glutamyl-2,
                     6-diaminopimelate--D-alanyl-D-alanine ligase"
                     /protein_id="HWX71990.1"
                     /translation="MTARVLWTVEGMAAAIGAEREGALPLSVPGISIDSRTLAPGDAF
                     FAIQGDHRDGHDFVAAALASKAGLAVAAADRRSELPQDVPLLVVPDVLAALRALAAAA
                     RARLQGKVIGVTGSVGKTGTKEALRLALSQDGETHASAASYNNHWGVPLSLARCPASA
                     RYAVLEMGMNHAGEIVPLSRLARPHVAIITTVAPVHLEFFGSLAKIADAKAEIFLGLE
                     AGGAAVINRDNSQFVHLKRRAKQAGVARIVSFGEREQADARLIKCALHPGCSAVQADI
                     LGTELTYKIGAPGRHLVHNSLAVLAAAVLVGADLALAALALADFKPASGRGAAFEIDL
                     PGGPATVIDESYNANPASMAAALALLGQRPVGARGRRIAVLGDMLELGPRGRALHRGL
                     LAPVDANAIDLVFCCGPLMRALWRALPASRRGGYAEDSAALEPQVLSAVGAGDVVMVK
                     GSLGSRMAPIVKALQKLSVRRDMLETASAQG"
     gene            complement(3640..5097)
                     /locus_tag="VNY79_05795"
     CDS             complement(3640..5097)
                     /locus_tag="VNY79_05795"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016881 - acid-amino acid ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008360 - regulation of cell shape
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HWX71991.1"
                     /translation="MKLREILPSDAEIEARYADLDVAGVTADSRAVRRGDAFVAIAGG
                     KTDGLTFVAPALAAGAAAIVAERRPQVPLAEGTAFARVDNARRALAVMAARFFPRQPR
                     VVVAVTGTSGKTSVAAFTRQIWAARGHRAASIGTVGVVSPRGATYGSLTTPDPVALHR
                     TLDALAGDEITHLAIEASSHGLDQYRLDGLHIAAGAFTNITRDHLDYHLSFEAYFAAK
                     LRLFAVLIEPGGAAVIDVDHEHAQAVIAAAQARGLSIVSVGRHGTGIRLLESARDGFA
                     QALRLEHDGRFFRVRLPLVGEFQVENALVAAGLAVATGGDPAAVFPALERLTGAKGRL
                     EFVGASRGGAPIFVDYAHKPDALAKALDALRPYTRGRLIVVFGAGGDRDRGKRPLMGA
                     VAAAKADRVIVTDDNPRSEDAAAIRAAIIAAAPGSIEIGDRHEAIRSAIGDLGAGDVL
                     LIAGKGHETGQIIGDRVVPFSDHEAVAAALKELAA"
     gene            complement(5126..>6629)
                     /locus_tag="VNY79_05800"
     CDS             complement(5126..>6629)
                     /locus_tag="VNY79_05800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HWX71992.1"
                     /translation="PDILDRRGEVLATDVRVPSLYGEPRHIIDVDEAVELLTAELPDL
                     DSAELRERLSSKRGFVWLKREITPKQQKDVYRMGLPGIGFLSENKRAYPNGAEISHVL
                     GHVNIDNQGIAGMEKWLDGNGLAALHLAGLATDRLQTPVELSVDLRVQHALRDELVAA
                     RTKFKALAAAGIVLDVRTGEVVAMVSEPDYDPNNPRQALDPTRINRLTTGVFEMGSTF
                     KAFTIAMALDSGKVTLKSSFDARMPLRFGKFDIHDFHAQHRVLTVPEIFTYSSNIGAA
                     RAALAVGVEAHKAFLRKLGQLDRLRTELPESAEPIVPKRWGELNTITIAFGHGLSVAP
                     LQAVMGVAALMNGGMLIPPTFLRRTEAEAQALGKQVIKPSTSEMMRYLMRLNVEKGTA
                     EKAEVRGYYIGGKTGTADKVINGHYSKTKVLTDFMAVLPADQPRFVMLIMLDDPQAIP
                     ETRGFTTSGWNAVPVGGAVVARIAPLLGIEPRLDLPPADQLILASIRESR"
BASE COUNT         1109 a         2216 c         2313 g          991 t
ORIGIN      
        1 gccgcggcgg cgcaggcggc gttctgggcg ttgtgcagcc cacgcagcga gccgatgccg
       61 ccgatctcgg cgatcagcga ggcctttccg ccgaccgcgc gcaggatgcg ctcctcttca
      121 acataaaccc cgtcggccag cggctgctgc accgaaaccc ggaccacccg tttgccggat
      181 ttctcgagtt cggcggcgac ggctcggcac cattcgtcat cgacgccgat gatcgcgatg
      241 ccatccttgg gcacgccggc caccaggcgc gccttcaccg ccgcgtagtt ctccatcgtg
      301 ccgtggcggt cgagatgatc ttcgctgagg ttgatcaaga tgccgaccga ggaatcgagc
      361 gagggcgcca gatcgatctg atacgaggaa cactcgacga catggacgcg gcccgcctgg
      421 ggcggttcca gcgagaggat tgcggtgccg atgttgccgc caagctgcgc gtcgaggccg
      481 gccgatgcgg cgaggtgcgc gatgagcgcc gtggtggtcg atttcccgtt ggtcccggtg
      541 atggcgacga acggcgcacc cggcgcgagg cggcggcgct cgcggcagaa cagctcgatg
      601 tcgccgatca cctcgaccgc ggcttttcgc gcgagcgcaa cgctccaatg cgggctcgga
      661 tgggtgagcg gaacgccggg cgcaagcacc agcgccgcga tcttcgacca atccagctcc
      721 cgcaggtcgg cggtcggaat gccggctgcg ttcgccttcg ccacgctttg cgcatcgtcg
      781 tcgaaggcga ccacgtcggc gccgccggcg aggagcgcgc tcgcgctcac cagtcccgag
      841 ccgcccagcc cgaacacggc aaccttctga ccggcgaagg tggtgacggg gatcatggtg
      901 cgccttccgc gccttccctt cctccacccg gaccgcgctt gtcgcttgcc cgagtacaag
      961 cttgtgggaa ggggccaggg gtgggggtcg ggaggtaacg cgcgagcgtc gacgaacggc
     1021 gcgccatctc ccgacccccc tccccaacaa ggggggcggg agcagcgggc cgcgcccgcc
     1081 gacgctggct tgttatcagc gataacatca acgcagcttc agggtcgata gcccggcgag
     1141 cgcgagcacc accgagacga tccagaagcg gatgacgatc tgcggctcgg tccagccgag
     1201 ctgctcgaag tgatggtgga tgggcgccat cctgaacacg cgctttccgg tgagcctgaa
     1261 cgacaccacc tgcacgatga ccgaaacggc ctcgagcacg aacaggccgc cgatgaccgc
     1321 gagcacgatc tcgtgcttgg tggcgacggc gacggtgccg atcaggccgc cgagcgccag
     1381 cgagccggtg tcgcccatga agatcgaggc cggcggcgcg ttgaaccaga gaaaaccgag
     1441 gccggcgccg accacggcgc cgcacagcac cgccagttct ccggtgccgg ccacgtagtg
     1501 gatctgcaga taatcggcga acacggcgtt gccgctgaga taggcgatca tgccgaagct
     1561 cgcggacgcg atcatcaccg gcacgatggc gaggccgtcg aggccgtcgg tcaggttcac
     1621 ggcattgccg gcgccgacga tgatgaagac cgcgaacatc acgaaggccc agccgaaatt
     1681 gacgagcagc tccttgaaaa acgggaacac cagcgaggtc gagaacggcc cgtgcccaag
     1741 ctcgaccagc gcgacgcagg cgaccagcgc gatggcggct tcgatagtaa ggcgcgtgcg
     1801 ggcggcgaag ccgttgtgcg tctgtttctt gactttcaga tagtcgtcgt agaagccgac
     1861 gaatccaaag ccgagcgtca cccagagcac cacccagaca tagggattgg ccggattggc
     1921 ccagagcagc gtcgagacga gcatgccgga caggatcatc agcccgccca tcgtcggcgt
     1981 accggccttg gcgatgatat gcgatttcgg cccgtcggcg cggatcggct gccccttgcc
     2041 ctgcagcagg cgcaggcggt gaatcatggt ctgtccgaag aggaacacaa agatcagccc
     2101 ggtgatcacc gcgccgccgg tgcggaaggt gatatagcgg aacacgttga ggatggagag
     2161 cttgtccgac aattccacga gcaaataaaa catcgcctca accttgtgcg gacgcggttt
     2221 ccaacatgtc acgccggacg gacagcttct gcagcgcctt gacgatgggc gccatgcgcg
     2281 agccgagcga gcccttgacc atgacgacat cgccggcacc cacggcggac agcacttgcg
     2341 gttcgagcgc ggccgagtcc tcggcgtagc cgccgcgacg gctcgccgga agcgcgcgcc
     2401 agagcgcgcg catcagcggc ccgcagcaga acacgagatc gatcgcattg gcgtcgaccg
     2461 gggcgaggag gccgcggtgc aacgcgcgcc cgcgcggccc cagctcgagc atgtcgccga
     2521 gcacggcgat gcgccgcccg cgcgcgccga ccggccgctg gccgagcagc gccagcgcgg
     2581 cggccatcga tgcgggattg gcgttgtagc tctcgtcgat gacggtcgcc ggcccgccgg
     2641 gcagatcgat ctcgaacgcc gcgccgcggc cggaagcggg cttgaagtcg gcgagcgcaa
     2701 gcgcggcgag cgcgagatcg gcgccgacca gcaccgccgc cgcgagcacc gccaacgaat
     2761 tgtgcacgag atggcgcccc ggcgcgccga tcttgtaggt cagctcggtg ccgaggatgt
     2821 ccgcctggac cgccgagcag ccgggatgca gcgcgcattt gatgagccgc gcgtccgcct
     2881 gctcacgctc gccgaacgag acgatgcggg cgacgcctgc ctgcttggcg cggcgcttga
     2941 ggtgcacgaa ctgcgagttg tcgcgattga tcaccgcggc gccgccggct tcgagcccga
     3001 gaaagatctc cgccttggcg tcggcgattt tggccagcga gccgaagaat tcgaggtgca
     3061 ccggcgcgac cgtggtgatg atggcaacgt gcgggcgcgc gagccgcgac agcggcacga
     3121 tctcgccggc gtggttcatt cccatttcca ggaccgcata gcgcgcgctc gccggacagc
     3181 gcgcgagcga cagcggcacg ccccaatgat tgttgtagga agcggcggag gcgtgggtct
     3241 cgccgtcctg tgacagcgcg agccgcaacg cctccttggt gccggtcttg ccgaccgagc
     3301 cggtaacgcc gatcaccttc ccttgcaggc gtgcccgcgc cgccgcggcg agcgcgcgca
     3361 aggcggcaag cacgtcgggc acgacgagca gcgggacatc ttgcggcaac tccgatcgcc
     3421 gatcagcggc tgcgacggca agcccggcct tcgacgccag cgccgcggcg acgaaatcgt
     3481 gaccgtcgcg atggtcgcct tgaatggcga agaacgcgtc gcccggcgcc agcgtgcggc
     3541 tgtcgatcga gattcccgga accgatagcg gcaacgcccc ctcgcgttcg gcgccgatcg
     3601 ctgccgccat gccctcgacg gtccacaaca cccgcgccgt catgcggcaa gctccttgag
     3661 cgccgcggcg accgcctcat gatcgctgaa cggcacaacc cggtcgccga tgatttggcc
     3721 ggtttcatgg cccttgccgg caatcaacag cacatcgccg gcgccgaggt cgccgatcgc
     3781 ggaacggatc gcctcgtggc ggtcgccgat ctcgattgag cccggcgcgg cggcaatgat
     3841 tgcggcgcgg atcgcggcgg cgtcctcgct gcgcggattg tcgtcggtga cgatgacgcg
     3901 gtcggccttg gcggcggcga ccgcccccat cagcgggcgt ttgccgcggt cgcggtcgcc
     3961 accggcgccg aacacgacaa tgagccggcc gcgcgtgtag gggcgcaacg cgtcgagcgc
     4021 cttggcgagc gcgtccggct tgtgcgcgta atcgacgaaa atcggcgcgc cgccgcggct
     4081 cgcgccaacg aattcgagcc gtcccttggc gccggtgagg cgctcgagcg ccgggaacac
     4141 cgccgctgga tcgccgccgg tcgcgacggc gagcccggcc gcgaccagcg cgttttccac
     4201 ctgaaactcg ccgaccagcg gcaatcgcac gcgaaagaat cggccgtcgt gctcgagcct
     4261 caaggcttgt gcgaatccat cccgggcgga ttccagaagc cggatgccgg ttccatgacg
     4321 ccccacgctg acaatcgaaa ggccgcgcgc ctgcgcggcg gcgatgacgg cctgcgcatg
     4381 ctcgtggtcg acatcgatga ccgcggcgcc gcccggttcg atgaggaccg cgaagagccg
     4441 cagcttggcg gcgaagtagg cctcgaagct caggtgatag tccaggtgat cgcgcgtgat
     4501 gttggtgaaa gcgccggcgg caatgtgcag gccgtcgagg cggtattgat cgagcccatg
     4561 cgaggacgcc tcgatcgcaa gatgggtgat ctcatcgcca gcgagagcgt cgagcgttcg
     4621 gtgcagcgcg accggatccg gcgtcgtcag cgagccgtag gtggcgccgc ggggagagac
     4681 gacaccgaca gtgccgatgc tcgcggcgcg gtgtccgcgt gcggcccaga tctgccgcgt
     4741 gaaggccgca accgacgttt ttccgctcgt gccggtgacg gcgacaacga cgcgcggctg
     4801 gcgcgggaag aatctggcgg ccatcacggc gagcgcgcgg cgggcgttgt cgacgcgcgc
     4861 gaaggccgtt ccctccgcca gtggaacctg cggccggcgc tcggccacga tcgccgccgc
     4921 gccggcagcg agggcgggcg cgacgaaggt gagcccgtcc gtcttgccgc cggcaatcgc
     4981 gacgaacgca tcgccgcgcc tgaccgcgcg gctgtcagcc gtcaccccgg cgacgtcgag
     5041 atcggcgtag cgggcctcga tctccgcgtc tgagggcagg atttcgcgaa gcttcatggc
     5101 ggctcggtcg atgtgcggcc ccgccttacc tgctttccct tatcgaggcc agtatgagct
     5161 gatcggccgg cggcaggtcg aggcgcggct cgatgccgag aagcggcgcg atgcgcgcaa
     5221 ccacggcacc gccgaccgga accgcgttcc agccggaggt ggtgaagccg cgcgtctccg
     5281 gtatcgcctg cggatcgtcg agcatgatca gcatcacgaa gcgcggctga tcggccggca
     5341 gcaccgccat gaagtcggtc agaaccttgg tcttggaata atgaccgttg atgaccttgt
     5401 ccgccgtgcc ggtcttgccg ccgatatagt agcccctcac ttcggccttc tcggcggtgc
     5461 ccttctccac gttgagccgc atcagatagc gcatcatctc gctggtcgaa ggcttgatga
     5521 cctgcttgcc gagcgcctgt gcctcggctt ccgtccgccg caggaaggtc ggcggaatga
     5581 gcatcccgcc attcatcaac gcggcgacgc ccatcaccgc ctgcaacggc gcgaccgaga
     5641 ggccgtggcc gaaggcgatg gtgatggtgt tgagctcgcc ccagcgcttg ggcacgatcg
     5701 gctcggcgct ttcaggaagc tcggtgcgca gccgatcgag ctggcccaac tttctgagga
     5761 aggccttgtg cgcctcgacc ccgaccgcga gcgcggcgcg ggcggcgccg atgttcgagg
     5821 aataggtgaa aatctctggg accgtcagca cccggtgctg ggcgtggaag tcgtggatgt
     5881 cgaacttgcc gaagcgcagc ggcatgcgcg cgtcgaagga ggatttgagc gtgaccttgc
     5941 cggaatcgag cgccatcgcg atggtgaacg ccttgaaggt cgagcccatc tcgaagacgc
     6001 cggtggtcag cctgttgatc cgcgtcggat cgagcgcctg gcgcggattg ttgggatcgt
     6061 agtcgggctc cgaaaccatg gcgacgacct cgccggtgcg cacgtcaagc acgatcccgg
     6121 cggcggccag cgccttgaac ttcgtccgcg ccgccacaag ctcgtcgcgc agcgcgtgct
     6181 gcacgcgcag gtcgaccgac agctcaaccg gggtctgcag gcggtcggtg gcgagcccgg
     6241 ccaggtgcag cgccgcgagc ccgttgccgt cgagccactt ctccatgccg gcgatgccct
     6301 gattgtcgat gttgacgtgg ccgagcacgt gggagatttc ggcgccgttc gggtaggcgc
     6361 gcttgttctc gctgaggaag ccgataccgg gcaggcccat ccggtagacg tccttctgct
     6421 gcttcggcgt gatctcgcgc ttgagccaga cgaagccgcg cttcgaggag agccgttcgc
     6481 gcagttccgc ggagtcgaga tcgggcagtt cggcggtgag cagctcgacc gcctcgtcga
     6541 catcgatgat gtgacgcggc tcgccgtaga gcgagggcac gcgcacgtcg gtggccagca
     6601 cttcgccgcg gcggtcgagg atgtcggga
//
LOCUS       DATMQB010000189         7599 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3159979, whole genome shotgun sequence.
ACCESSION   DATMQB010000189 DATMQB010000000
VERSION     DATMQB010000189.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7599)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7599)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7599
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3159979"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1023
                     /locus_tag="VNY79_05805"
     CDS             <1..1023
                     /locus_tag="VNY79_05805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal-phosphate dependent enzyme"
                     /protein_id="HWX71993.1"
                     /translation="RRRGVIAMSAGNHAQAVAYHARRLAIPATIVMPVTTPFVKVKAT
                     EALGAGVVLDGETLAQAQARAEAIAAERNLVWVHPYDDPHIIAGQGTIALEILAEVPD
                     LDVLVVPIGGGGLIAGCAIAARAVRPSIEIVGVECALYPSMWNALHHQRMPCGGATLA
                     EGIAVSNVGRLTLPVVRDCVSDIILVDEPLLERAVNAFLTLQKAMAEGAGAAGLAAML
                     AEPARFRGRKVGLILCGGNIDPRILASIMVRELERAERIVSFRLTIPDRPGILGQIAT
                     RFGEFGANILAVDHHRLFLDVPAKGAKVDVTVETRDAAHAEEIFRALAVDGYQPVRMP
                     SGTALA"
     gene            complement(1042..1794)
                     /locus_tag="VNY79_05810"
     CDS             complement(1042..1794)
                     /locus_tag="VNY79_05810"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX71994.1"
                     /translation="MASEDQFRHYFPLMRRVIILVAVLTAVPVILWTITVFVRGYFGP
                     PKIATARPLAAVSIEAPATPAASQDGSARPTAAPQEAKVVDAPPFGEARASATDARTL
                     APAAKGGTIWEQRQAGSDAGPPSTAPSAAMAAPAAPGGGDQRAGQAPAAKMMAAAPAM
                     PDASAPTTGTLAAQDPPDTEQQTADAALPAAEPIAGPVPLPRHRPRALAMLQNGGVPM
                     PRPRPEAAGSTASEGSATPLGWLQKLFTPQQQ"
     gene            complement(1843..2910)
                     /gene="hemB"
                     /locus_tag="VNY79_05815"
     CDS             complement(1843..2910)
                     /gene="hemB"
                     /locus_tag="VNY79_05815"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0004655 - porphobilinogen synthase
                     activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0033014 - tetrapyrrole biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HWX71995.1"
                     /translation="MAIKFGRPLERSLTRIEAETQASAERLDLAIRPRRNRRAEWARR
                     MVREHVLTTDDLIWPLFLVDGTKVRVPVASMPDVERLSIDEAVRAAERAAKLTIPCLA
                     LFPYTDPAFRDDEGSEALSADNLVCRAIRAIKKEVPEIGVLCDVALDPYTSHGHDGLL
                     RDGVILNDETVAVLVRQALVQAEAGCDVIAPSDMMDGRVGAIRAGLDAAGFGDVQIMA
                     YAAKYASAFYGPFRDAVGSSATLIGDKRTYQMDPANSDEALREVELDIDEGADMVMVK
                     PGMPYLDVVHRVKSAFAMPTFVYQVSGEYAMIMAAAGNGWLDGDKAIVESLIAFKRAG
                     ADGILTYFAARVGEKLKKGGA"
     gene            3044..3505
                     /locus_tag="VNY79_05820"
     CDS             3044..3505
                     /locus_tag="VNY79_05820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6163 family protein"
                     /protein_id="HWX71996.1"
                     /translation="MSDQSQRRPRRPSDLLEPVHAADQNAKASGSWAEYLVLFLRVMA
                     AISLIKGLYHWAAVCGIGAAADGGFEAHTVAWRTATVFFAVLDLVAAVGLWLAAPWGA
                     VVWLTSVVSMAVVELFFPQVYGGSTFIVIVEMTLLGVYLWLAIVAARERPA"
     gene            3539..4288
                     /locus_tag="VNY79_05825"
     CDS             3539..4288
                     /locus_tag="VNY79_05825"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018428935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HWX71997.1"
                     /translation="MPQLSAIVITRDEAANIGECLDSLAFCDERIVVDCGSTDSTVDI
                     ARKRGARVEFHEWRGFGPQKIHALALATGTWVLSIDADERVTPELAAAIRAAIAAGDA
                     DAWEFPRLSSFCRRPMRHSGWYPDYVLRLFRRGKARFDDAIVHERVICAGVVKRLRPP
                     LIHHPVARLEDALSRMDRYSTASAEVIVAAGRKVSFMTGIGHGLYSFLRTYVLRAGFL
                     DGAEGFLLAVANAEGSYYRYMKAWLATRERK"
     gene            complement(4290..5468)
                     /locus_tag="VNY79_05830"
     CDS             complement(4290..5468)
                     /locus_tag="VNY79_05830"
                     /inference="COORDINATES: protein motif:HMM:NF013257.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 9 protein"
                     /protein_id="HWX71998.1"
                     /translation="MTSLAADIEDFSKILLIKLSAVGDVVHTIPVLNKLRRRYPAAQI
                     DWLVTPPIAELLRHHPAITNVIEFAREEWQSPWRLTPFANYARLAASLRATGYDLVVD
                     MHGQLRTALLTLATGATVRVGFDRPRPEVWSASDREFPPLARKHAWQGAREGSWLAYT
                     HHIPVPTLDVHAVDRYLNVGPILGLDDGAADFSFPIPAAASARIEQLLRGHGIAATPL
                     LVLAPGTVWETKHWGSGKFAEVARHFMQKGFAATLIGSRRERAVCAEVAELAPGAVNF
                     AGETSLSELAALIRRSTICVTNDSGPMHLAVALGRPVASVFGPTDAIWIGPYRRKNAV
                     LQANLPCSPCYLRQLSRCPHGHACMHDVSARAAIERMEAMVGGRAASAGVVETHAPAR
                     "
     gene            complement(5562..6203)
                     /locus_tag="VNY79_05835"
     CDS             complement(5562..6203)
                     /locus_tag="VNY79_05835"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: protein motif:HMM:NF025024.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008198 - ferrous iron binding [Evidence
                     IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2OG-Fe(II) oxygenase"
                     /protein_id="HWX71999.1"
                     /translation="MPNYMRLEAFRTTPLATQPFQHLVVPGFIGPAALAEINADYPKI
                     SSSGSFPVDQVTFGPAFQSLLDELESDEFRDAFEEKFALNLSGRPTVTTVRGRCDASD
                     GQIHTDSKSKIITVLIYMNETWGQAGGRLRLLRSAHDLNDIIVEVPPVSGTLLAFKRS
                     NNSWHGHEPFAGERRVIQFNWLTSQGNRQIAMLRHHTSASFKRMLQMILPNRA"
     gene            complement(6300..>7599)
                     /locus_tag="VNY79_05840"
     CDS             complement(6300..>7599)
                     /locus_tag="VNY79_05840"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HWX72000.1"
                     /translation="VEIVYRVFGVDTAYYALAQAVVVIAFILVWTTARPLVGAVGALV
                     AILIIDGMHYFNFTAAKFNHDVIQLPFWALAGFAFHAGLRRGGIGYWVLLGAALGCAL
                     WAKYFVAVLVAPLVLFMLLDWEARRRLAAPGPWVAAAVALVIMAPHLVWLVQNDFLPF
                     HYAEARALPVRGPFDHLLRPVQFLGGQLFFLIPALVIAAPLFWPRSGNKNTPSATADA
                     FDKRIITLLAFGPALAVFALSLVTGRGTVTMWGYPLWLFLGLWIVLFARAALDHARLV
                     WIGVLWATVFAILTVAFIADYTVLPRIDHRYRSAFYPGGALAAAVTQRFEAAASRPPA
                     YIIASMWNGGNVAHYSGLHPQPRVLIDGLPRRAPWIDLADLRTRGAVVVWTDGDLNSL
                     PESFAAVAAGAEIGAPFALPFRSGEHVLRVGWAVLRPQAR"
BASE COUNT         1253 a         2486 c         2615 g         1245 t
ORIGIN      
        1 cgccgccgcg gcgtgatcgc catgtccgcc ggcaaccacg cccaggcggt ggcctatcat
       61 gcccggcggc tcgccattcc ggcgactatc gtcatgccgg tgacgacccc gttcgtgaag
      121 gtgaaggcga ccgaggcgct cggcgctggc gtcgtccttg acggggaaac gctcgcgcag
      181 gcgcaggcgc gcgccgaggc gatcgcggcg gaacgcaatc tcgtctgggt gcatccttac
      241 gacgatccgc acatcatcgc cggccagggc acgatcgcgc tcgaaatcct ggcggaggtg
      301 ccggacctag acgttctggt cgttccgatc ggcggcggcg gcctcattgc cggctgcgcc
      361 atcgccgcgc gcgcagtgcg gccgtcaatc gagatcgtcg gcgtcgaatg tgcgctctat
      421 ccgtcgatgt ggaacgcgct tcatcaccag cgcatgccat gcggcggcgc aacgctggcc
      481 gaaggtatcg ccgtgagcaa tgtcggcagg ctcacactgc cggtcgtgcg tgactgtgtg
      541 agcgacatca ttctggtcga cgagccgctg ctcgagcgcg ccgtcaacgc gtttctcacg
      601 ttgcagaagg cgatggccga aggggcgggc gccgccggcc ttgccgccat gctggccgag
      661 ccggcccggt ttcgcggccg caaggtcggc ctgatcctgt gcggcggcaa catcgatccg
      721 cgcatcctcg cctccatcat ggtccgcgaa ctggaacgtg ccgagcgcat cgtctcgttc
      781 cgcctcacca ttccggatcg cccggggatt ttgggacaga tcgctacgcg gttcggcgag
      841 ttcggcgcca atattcttgc cgtcgatcat caccgcctgt tcctcgacgt tccggccaag
      901 ggcgcgaaag tcgacgtcac cgtggagacg cgcgacgccg cccatgccga agagattttc
      961 cgggcgctcg cggttgacgg ctaccagccg gtccgcatgc cgagcggaac ggcgctggcg
     1021 tgagtggcgc ttgcggcggc gctactgctg ctgtggcgta aagagcttct gcagccagcc
     1081 gagcggcgtg gcgcttcctt ccgatgcggt ggagccggcc gcttccggcc gcggccgcgg
     1141 catcggaacg ccgccgttct gcagcatcgc caaagcgcgc ggccggtggc gcgggagcgg
     1201 gacggggccg gcgatcggct ccgccgcggg caaggccgcg tcggccgtct gctgctccgt
     1261 gtccggcgga tcctgggcgg ctaacgtccc tgtagtgggc gccgaggcgt cgggcatcgc
     1321 cggggcggcc gccatcatct tggcggcagg cgcttggcct gctcgctgat cgccgccgcc
     1381 cggtgcggca ggcgccgcca tcgccgcgct tggcgctgtc gaggggggcc cggcatcgct
     1441 gccggcttgc cgctgctccc aaatcgtgcc gcccttcgcg gcaggcgcca gggtccgcgc
     1501 atccgtcgcg ctcgcccgtg cttcgccgaa cggtggagcg tcgacaacct tagcttcctg
     1561 gggcgctgcc gtcggccgcg cactcccgtc ctggcttgcg gccggcgtcg ccggcgcttc
     1621 aatcgaaacc gccgccaacg gccgcgcggt cgcgatcttc ggcggcccga agtagccgcg
     1681 cacgaacact gtgatcgtcc acaatattac cggcactgcg gtcagcaccg ccaccaggat
     1741 gatgacccgc cgcatcagcg ggaagtagtg ccggaactga tcctcgctag ccatggcgtc
     1801 cgctctcgtt actcacttcg cattcgaggc gggggcggtc tgctacgcgc cgcccttctt
     1861 caatttctcc ccgaccctgg cagcgaaata ggtcagtatg ccgtctgcac cggcacgctt
     1921 gaaagcaatc aggctttcga cgatggcctt gtccccatca agccagccgt tacccgcagc
     1981 ggccataatc atcgcatatt caccagacac ttggtagaca aaagtgggca ttgcgaatgc
     2041 gcttttgacg cggtgcacca cgtccagata aggcatcccg ggcttgacca tcaccatatc
     2101 ggcgccctcg tcgatatcga gctcgacctc acgcaacgcc tcgtccgaat tcgccgggtc
     2161 catctgataa gtgcgcttgt cgccgatgag cgtcgcgctc gagccgaccg cgtcgcggaa
     2221 cggaccgtag aacgcggaag cgtatttggc ggcataggcc atgatctgca cgtcgccgaa
     2281 ccccgcggcg tcgagaccgg cgcggatcgc gccgacgcgc ccgtccatca tatctgacgg
     2341 cgcaatgacg tcgcagccgg cctcggcctg gaccagggcc tgtcgcacca gcacggcgac
     2401 ggtctcgtca ttgaggataa cgccgtcgcg cagcaggccg tcgtggccgt ggctcgtgta
     2461 cggatcgagc gcgacgtcgc agaggacgcc gatctccggc acctccttct tgatcgcgcg
     2521 gatggcgcgg cacaccagat tgtcggcgct gagcgcttcc gagccctcgt catcgcggaa
     2581 cgctggatcg gtatagggaa agagcgcgag gcaggggatg gtgagcttcg cggcgcgctc
     2641 ggcggcgcgc accgcctcgt cgatcgagag ccgctcgacg tccggcatcg aggcaaccgg
     2701 aacccggact tttgttccgt cgactaggaa caacggccag atgaggtcgt cggtggtgag
     2761 cacgtgttcg cgcaccatgc gccgcgccca ttccgcacgc cggttgcggc gcgggcggat
     2821 ggcgaggtcg aggcgctcgg ccgacgcctg agtttcggcc tcgatccgcg tcaagctgcg
     2881 ttcaagcggc cggccgaatt tgatcgccat gagcaggctc cagttgggcg gcactctttt
     2941 tagccgttcc agcgttggat cgccagccgc cgcggccggc agcgtatggc tggtcgccgg
     3001 cggattgact gcgcgggctg cgaatgtcaa aggccgcgct gccatgagcg atcaatcgca
     3061 gcgccgaccc aggcggccga gcgacctgct cgaaccggtg catgccgccg atcagaatgc
     3121 gaaagccagc gggtcctggg ccgaatatct cgtcctgttt ctgcgcgtca tggcggcgat
     3181 ttcgctgatc aaggggctct atcactgggc ggcggtgtgc ggcatcggcg cggcggcgga
     3241 cggcggtttc gaggcgcaca ccgtggcgtg gcgcacggct acggtattct ttgccgtcct
     3301 cgatctcgtc gccgcggtcg gtctgtggct cgcggcacca tggggggcgg tggtgtggct
     3361 cacctccgtc gtgtccatgg cggtcgtgga actgtttttt ccgcaggtgt atggcggcag
     3421 cacgttcatc gtgatcgtcg agatgacgct gctcggcgtc tatctatggc tcgcgatcgt
     3481 ggccgcgcgc gaacggccgg cgtgacggac gcgcaagccg cagaccggaa gtcggatcat
     3541 gccgcagctc agcgccatcg tgatcacccg cgacgaagcg gcaaacatcg gcgaatgcct
     3601 cgacagcctc gccttctgcg acgagcgcat cgtcgtcgat tgcggcagca ccgactcgac
     3661 cgtcgacatc gcgcggaaaa ggggcgcccg cgtcgaattt cacgaatggc gcggttttgg
     3721 cccgcagaag attcacgcgc ttgcgctcgc gactggcaca tgggtgctgt cgatcgatgc
     3781 cgacgagcgt gtcacgcccg agcttgcggc tgcgatcaga gcggcgatcg ccgcgggcga
     3841 cgccgatgcc tgggagtttc cgcggctctc cagcttctgc cgccggccga tgcgccattc
     3901 cggctggtat cccgattacg tgctgcggct gttccgccgc ggcaaggccc gcttcgatga
     3961 cgccatcgtc cacgagcgcg tgatctgcgc cggcgtggtc aagcggctgc ggccgccgct
     4021 catccaccat ccggtggcgc ggctcgagga cgcgctttcg cgcatggacc gctattcgac
     4081 ggcaagcgcc gaggtgatcg tcgccgccgg ccgaaaagtg tcgttcatga ccgggatcgg
     4141 ccatggtctc tattcgttcc tgcgcaccta cgtgctgcgc gccggttttc tcgatggcgc
     4201 cgaggggttt ttgctcgcgg tcgccaatgc cgagggcagc tactaccgct acatgaaggc
     4261 ctggctggcg acgcgcgagc gcaagtgagc taccgcgcgg gcgcgtgcgt ctcgaccacg
     4321 ccggcgctgg ccgcacgccc gccgaccatc gcctccatcc gctcgatcgc cgcgcgcgcc
     4381 gaaacgtcgt gcatgcaggc gtgtccgtgc gggcagcggg aaagctgacg caggtagcag
     4441 ggagagcagg ggaggttcgc ctgcagaacg gcgttcttgc ggcgataggg cccgatccag
     4501 atcgcgtcgg tggggccgaa tacgctcgcg accggccggc ccagtgcgac ggcaaggtgc
     4561 atcggcccgg aatcgttggt gacgcagatg gtcgagcggc ggatcagcgc ggcaagctcg
     4621 ctcaaactgg tctcgccggc gaagttgacc gcacccgggg cgagctcagc gacctccgcg
     4681 cagacggcgc gctcgcgccg tgatccgatg agcgtcgcgg caaagccctt ctgcatgaaa
     4741 tgccgcgcca cttccgcaaa cttgccgctg ccccaatgct tggtttccca gaccgtcccc
     4801 ggcgcgagca cgagcaatgg cgtagcggcg atgccgtgcc cacgcagaag ctgctcgatg
     4861 cgcgcgctcg ctgctgcggg aatgggaaac gagaaatcgg ccgcgccgtc gtccaggccc
     4921 aggatcggcc cgacgttgag ataacggtcg acggcgtgca catcgagcgt gggtaccggg
     4981 atgtgatgcg tgtaggcgag ccagcttcct tcccgcgctc cctgccatgc gtgcttgcgc
     5041 gccagtggcg gaaactcgcg gtcggaagcg gaccagacct ccggccgcgg ccggtcgaag
     5101 ccgacgcgca cggtcgcgcc ggttgcaagc gtcagcagcg cggtacgcaa ctggccgtgc
     5161 atgtcgacga cgagatcata gccggtggcg cgcaagcttg cggccaagcg cgcgtagttg
     5221 gcaaaaggcg tgagccgcca gggcgattgc cactcctcgc gggcgaactc gatgacattg
     5281 gtgatggccg gatggtggcg cagaagctcg gcgatcggcg gcgtcaccag ccagtcgatc
     5341 tgcgccgccg gatagcgccg ccgcagtttg ttcaggaccg ggatcgtgtg caccacgtcg
     5401 ccgacggccg acagcttgat cagcaggatt ttgctgaaat cctcgatatc ggccgcaagc
     5461 gaggtcaaaa caatggctcc tgtcggcgcg accgtggttg gcgcgcgcgg ccttcttcgc
     5521 aaaggcgccg ggcgccgccg ttacaagcgg ttcttatggg gctaggcgcg gttcggcaag
     5581 atcatttgca gcatgcgctt gaacgacgcc gaagtgtggt gcctcagcat cgcgatctgc
     5641 cggttgccct gcgacgtgag ccagttgaac tgaatcacgc gacgctcgcc tgcgaacggc
     5701 tcatggccgt gccaggaatt gttgctgcgt ttgaaggcga gcaacgttcc ggagaccggc
     5761 ggtacttcga cgatgatgtc gttgaggtcg tgcgccgaac gcagcaggcg cagccgcccg
     5821 cccgcttgtc cccacgtctc attcatgtag atgaggacag tgatgatctt gcttttcgag
     5881 tcggtgtgaa tctggccgtc gcttgcgtcg catcggccgc gcacggtggt gacggtcggc
     5941 cggcccgaga ggttgagcgc gaatttctcc tcgaaggcat cgcggaattc atcgctctcc
     6001 agctcgtcga ggagcgattg gaaggccgga ccgaaagtga cctggtcgac cgggaaactg
     6061 cccgatgagg aaattttcgg atagtcggca ttgatctcgg cgagcgccgc cgggccgatg
     6121 aagccgggta cgaccagatg ctggaacggt tgggtggcga gcggcgtcgt ccggaacgcc
     6181 tcaagcctca tgtagttagg catttcttct ttcgcctgcg tttgatcggt cgcgaaaggt
     6241 agcaccgcct cccgcagagg taaacgcgcg gtcgcagcgg cgcatctgtt ccgcgggaac
     6301 taccgcgctt gcgggcgcag caccgcccag cccacgcgca gcacgtgctc gccgctgcgg
     6361 aacggcagag cgaacggcgc gccgatttcg gcgccggccg ccaccgcggc aaagctctcc
     6421 ggcagcgaat taagatcgcc gtcggtccac accacaaccg cgccgcgggt gcggagatcg
     6481 gcaagatcga tccagggcgc gcggcgcggc aggccgtcga tcagcacgcg cggttgcgga
     6541 tgcagaccgg aatagtgggc gacattgccg ccgttccaca tgctggcgat gatgtaggcg
     6601 ggcgggcgac tggcggcagc ctcaaaccgt tgcgtgaccg cggcggcgag cgcgccgccc
     6661 ggatagaacg cggaacggta gcggtgatcg atccgcggca gcaccgtgta gtcggcgatg
     6721 aaggcgacgg tgaggatcgc gaaaacggtc gcccacagca cgccgatcca gacaaggcgc
     6781 gcgtgatcga gtgcagcccg ggcgaacagg acaatccaca ggccgaggaa cagccagagc
     6841 ggatagcccc acatggtgac ggtgccgcgg ccggtgacga gcgacaacgc gaagaccgcg
     6901 agcgccgggc cgaacgcgag cagcgtaatg atgcgcttgt cgaacgcgtc ggcggtcgcg
     6961 ctcggagtgt ttttgttgcc gctccgcggc cagaaaagcg gggccgcgat caccagcgcc
     7021 ggaatgagaa aaaacagttg tccgcccagg aactggacag gtcgcagcaa gtgatcgaac
     7081 gggccgcgca ccggcagggc ccgggcctcg gcatagtgga acggcaggaa atcgttctgc
     7141 accagccaga cgagatgcgg cgccatgatg acgagcgcca cggcagcggc gacccaaggg
     7201 cccggggccg ccaatcgcct gcgggcttcc caatcgagga gcatgaacag cacgagcggc
     7261 gcgacgagca ctgcgacgaa atatttggcc cacagcgcgc agccgagcgc cgctcccagc
     7321 aggacccaat atccgatccc gccgcgccgg agtccggcgt ggaaggcgaa accagcgagc
     7381 gcccagaacg gcagctggat cacgtcgtga ttgaacttgg cggcggtgaa attgaagtag
     7441 tgcatgccgt cgatgatgag gatcgcgacc agcgccccga cggcgccgac gagcgggcgc
     7501 gcggtcgtcc acacgaggat gaaggcgatg acgacgacgg cctgggcgag ggcgtagtaa
     7561 gcggtgtcga cgccgaacac ccggtagacg atctcgacc
//
LOCUS       DATMQB010000190         2550 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_370302, whole genome shotgun sequence.
ACCESSION   DATMQB010000190 DATMQB010000000
VERSION     DATMQB010000190.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2550)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2550)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2550
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_370302"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1050)
                     /locus_tag="VNY79_05845"
     CDS             complement(<1..1050)
                     /locus_tag="VNY79_05845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX72001.1"
                     /translation="MSNASRIHVNRRALLKGAAAGTAAALAAPMVVRADSKSIKIGMS
                     TILSGRVAQLGTSSRNAVMIEVEKINAAGGLAGRQIEMVIRDSKGQPQEAARLARELI
                     NTDGCEILIDAEASSGAFAVHEVARDLGMLCLHTNSETSALTADPKLRLPNVFRTCRQ
                     GVHDSIVGGTYAANIAKAKNLSTWMTASPDYAYGRDTTAEYMTYVKHFKPDVEVVGES
                     WPKLFQPDYTEIFTKILQTKPQVLYTCLWGGDITAFIDQGNIYALFGQTETFAVNMAD
                     YTALTAVKNLPKGIHSGNRYIKTFPNTPENAAWADAYRTKYNEYPTNWSWENATAMQF
                     LAAAAKQANSADGVKL"
     gene            1224..>2550
                     /locus_tag="VNY79_05850"
     CDS             1224..>2550
                     /locus_tag="VNY79_05850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HWX72002.1"
                     /translation="MHLPGRGTLHAMVNLSSFIRFHAARSPERIAVVFLDQRITYAEL
                     SRRIEQTAGYLAAQGVGPDDVVAVMMKNSAAFLEVAFAASHLGAVFLPINFRLAADEV
                     EYIAANAGAKLVLADAEFAAAVANLPATVLLDEAAQADTTTLAGECPPAPMHVRKPTD
                     LFRLMYTSGTTDRPKGVIHTYDNFYWKSIDHVIALGLGEDDRLLVAGPLYHVGAFDLP
                     GVAVLWVGGTLCIHRDFEVERVLASVAVEKLTGGWLAPVMLGAILAHPRRAAFDVSSV
                     RWIIGGGERTPEARIRQFAGYFTRGRYIDAYGLTESCSGDSFMEAGREIEKIGSVGRA
                     LAHVEIEIRDLAGARLAAGEAGEICLRGPKITQGYWRDANKTAASFHGDWFRTGDVGY
                     LDAEGFLYLTDRVKDMIISGGENIASSEVERVVYQLPQVREAAIIGVPDE"
BASE COUNT          389 a          803 c          866 g          492 t
ORIGIN      
        1 gagcttgacg ccgtccgccg agttcgcctg cttcgccgcc gcggcgagga actgcatcgc
       61 ggtcgcgttc tcccaggacc agttggtggg gtattcgttg tacttcgtgc gataggcgtc
      121 ggcccaggcg gcattctccg gcgtattggg aaacgtcttg atgtaacggt tgccggaatg
      181 gatgcctttc ggcaggttct tcaccgccgt gagcgcggtg tagtctgcca tgttcaccgc
      241 gaacgtctcg gtctgcccga acagcgcgta gatgttgccc tgatcgatga aggcggtgat
      301 gtcgccgccc cacaggcagg tgtagagcac ctgcggcttc gtctgcagga tcttggtgaa
      361 aatctcggtg tagtccggct ggaacagttt cggccaggac tcgccgacca cttccacgtc
      421 cggcttgaag tgcttcacgt aggtcatgta ctccgcggtg gtgtcgcggc cgtaggcgta
      481 gtcgggggag gcggtcatcc acgtcgacag attcttggcc ttggcgatgt tggcggcata
      541 ggtgccgccg acgatcgaat cgtggacgcc ctggcggcag gtgcggaaca cgttcggcag
      601 gcgcagcttc ggatcggcgg tcagtgcgct ggtttccgag ttggtgtgca ggcacagcat
      661 gccgaggtcg cgcgccacct cgtgcacggc gaaggcgccc gacgaggcct ccgcatcgat
      721 caaaatctcg cagccgtcgg tgttgatgag ctcgcgcgcc agccgtgccg cttcctgcgg
      781 ctgccccttc gaatcgcgga tgaccatctc gatctgccgc ccggcgaggc cgccggcggc
      841 gttgatcttc tccacttcga tcatcaccgc gttgcgcgag gaagtgccga gctgcgcgac
      901 ccggccggaa agaatcgtcg acatgccgat cttgatcgac ttgctgtcgg cgcggacgac
      961 catcggcgcc gccagcgcgg cggcggtgcc tgccgcggcg cccttgagca gggcgcggcg
     1021 attgacatga atccggctgg cgtttgacat cgggcttcct cccattgcgg atgcaccaga
     1081 gacgaagagg ctgcggcttg acgcgtgagc cgcgtatgtt ttgattgaac cggcctcgtc
     1141 ctgctcgcga gtttggagca tccatccggg gcagtcaatc gagcgggcat cgcgctcgtt
     1201 gccgcctgac ggcatcgatc gctgtgcacc tgcctgggcg tggaacgctg cacgcgatgg
     1261 tgaatctgtc gagcttcatt cgcttccatg ccgcgcggtc gccggagcgc attgccgtcg
     1321 tgttcctgga tcagcgcatc acctacgccg agctatcgcg gcgcatcgag cagaccgcgg
     1381 gctaccttgc ggcgcaggga gttggccccg acgacgtcgt tgccgttatg atgaagaaca
     1441 gcgcggcctt tctcgaagtc gccttcgccg ccagtcatct cggcgcggtg ttcctgccga
     1501 tcaatttccg ccttgccgcc gacgaggtgg aatacatcgc agctaatgcc ggcgcgaagc
     1561 tcgtgctcgc cgacgcagag ttcgccgcgg ctgttgccaa tctgccggcc acggtcctgc
     1621 tcgacgaggc ggcgcaggcc gacaccacta cgcttgcggg ggaatgtccg ccggcgccga
     1681 tgcatgtgcg caagccgact gatctgttcc gcctgatgta cacctccggt acgaccgacc
     1741 ggccgaaggg cgtcatccac acctacgaca atttctactg gaagagcatc gatcacgtga
     1801 ttgcgctcgg cctcggcgag gacgaccgcc tgctggtggc cgggccgctc taccacgtcg
     1861 gggcgttcga cctgccgggc gtcgccgtgc tgtgggtcgg gggcacgctc tgtattcacc
     1921 gcgatttcga agtcgagcgg gtgctcgcct cggtcgccgt ggagaagctc accggcggct
     1981 ggcttgcgcc ggtgatgctg ggcgcgatcc tggcgcatcc gcgccgtgcc gccttcgatg
     2041 tttccagcgt gcgctggatc atcggcggcg gcgaacgcac gccggaagcg cgcatccgcc
     2101 agttcgccgg ctatttcacg cgcggccgct acatcgacgc ctacggactg accgaatcgt
     2161 gcagcggcga ttcgttcatg gaggcgggcc gcgagatcga gaagatcggg tcggtggggc
     2221 gcgcgctcgc ccatgtggaa atcgagatcc gcgacctggc cggggcgcgg cttgctgccg
     2281 gagaggcggg cgagatctgt ctgcgcgggc cgaagatcac gcaaggctat tggcgcgacg
     2341 cgaacaagac ggcggcctcc ttccatggcg actggttccg caccggggat gtcggctatc
     2401 tcgatgccga gggatttttg tatctcaccg accgggtgaa ggacatgatc atctccggcg
     2461 gcgagaacat cgcctcctcc gaggttgagc gcgtcgtcta tcagctgccg caggtgcgcg
     2521 aagcggcgat catcggcgtg ccggacgaga
//
LOCUS       DATMQB010000191         3061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3160769, whole genome shotgun sequence.
ACCESSION   DATMQB010000191 DATMQB010000000
VERSION     DATMQB010000191.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3061
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3160769"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            317..1363
                     /gene="pdhA"
                     /locus_tag="VNY79_05855"
     CDS             317..1363
                     /gene="pdhA"
                     /locus_tag="VNY79_05855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045250 - cytosolic pyruvate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HWX72003.1"
                     /translation="MAVAQTKQADQVADERRPAGTAAQAGAVADFSKEEEFHALRQML
                     LIRRFEEKAGQMYGMGLIGGFCHLYIGQEAVVVGMQMAKRDGDQMITGYRDHGHMLAC
                     GMDPKGVMAELTGRRGGYSKGKGGSMHMFSREKNFYGGHGIVGAPAPIGTGLAFANKY
                     RSNDNVCLTFFGDGAANQGQVYESFNMAELWKLPVVYVIENNRYAMGTAVTRSTAQTD
                     LSKRGLSFNIPGVEVDGMDVRAVKAAGEEALAWCRAGKGPTIIEMMTYRYRGHSMSDP
                     AKYRTKEEVDRVRTEHDPIEQVRARLLAKKWADEDELKKIDASVRAVVNEAAEFATND
                     PEPDPAELYTDVYR"
     gene            1416..2885
                     /locus_tag="VNY79_05860"
     CDS             1416..2885
                     /locus_tag="VNY79_05860"
                     /EC_number="1.2.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004739 - pyruvate dehydrogenase
                     (acetyl-transferring) activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex E1 component
                     subunit beta"
                     /protein_id="HWX72004.1"
                     /translation="MPIQVLMPALSPTMEKGNLAKWLKREGDAIKTGDVIAEIETDKA
                     TMEVEAIDDGTLGKILVPEGTNDVAVNTPIATILAEGEDRSALAPTAPAPAGDGNGAA
                     APARAKAEATQPARPQHGAESAPPAAVEPAKAKAPAPPKTALAEPTPRPAVAAPDVPE
                     GTELVTMTMREALRDAMAEEMRRDGDVFIIGEEVAEYQGAYKVTQGLLQEFGARRVID
                     TPITEHAFTGLGVGAALAGLKPIVEFMTFNFAMQAMDHLINSAAKTRYMSGGQVEVAI
                     VFRGPNGPAARVGAQHSQDFSSWYAHVPGLKVLAPSTAADAKGLLKAAIRDPNPVIFL
                     ENEILYGVSSPVPKLDDYVLPIGRARVVRPGNDVTLVAWSIGMTYALKAADELAKANI
                     SAEVIDLRALKPMDSETVIESVKKTGRLVTVEEGWKQSGVGAEIAARVMEEAFDYLDA
                     PVARVSGKDVPMPYAANLEKLALPSVAEVVEAARAVTYR"
     gene            2913..>3061
                     /locus_tag="VNY79_05865"
     CDS             2913..>3061
                     /locus_tag="VNY79_05865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015823104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HWX72005.1"
                     /translation="MPINIFMPALSPTMEKGNLAKWLKKEGDAVKTGDVIAEIETDKA
                     TMEYEA"
BASE COUNT          595 a         1010 c          997 g          459 t
ORIGIN      
        1 gagctcgcgc ggctcaaggt tgagcgcggc caatgggaac ggcgcatcgc tctgctcaag
       61 tcgaacgggg tcgatcccga tatgctcgac gagcgcgccc gtgcgctgct cgactacgcc
      121 catccccacg acctgaccat gatgctcgcc gaaccgcccc atcgcgggcc ttgaactcgc
      181 tgcccgcgtc cccaaaataa atttttctgc caaggctttg gcggtggtca gcgattcccg
      241 gccgggatat gcgttgactt ccgccataag cccgtttggg ctacgcatgg aacccgcgga
      301 gttctcgagg acgctgatgg ccgtcgcgca aaccaagcaa gcggatcaag tcgcagacga
      361 acgccgcccg gccggaactg cggcacaagc gggtgcggtc gcggatttca gcaaggaaga
      421 ggagttccac gcgctgcgcc agatgctgct cattcggcgc ttcgaggaga aggccggcca
      481 gatgtacggc atggggctga tcggcgggtt ctgccatctc tatatcggcc aggaggcggt
      541 cgtcgtcggc atgcagatgg caaaacgcga cggcgaccag atgatcaccg gctaccgcga
      601 tcacggccac atgctcgcct gcggcatgga tccgaaaggg gtgatggcgg aactcaccgg
      661 gcggcgcggc ggctactcca agggcaaggg cggctcgatg cacatgttct cccgcgagaa
      721 gaatttttat ggcgggcacg gcattgtcgg cgcgccggcg ccgatcggca ccgggcttgc
      781 cttcgccaac aaatatcgca gtaacgacaa cgtctgcctg acctttttcg gcgacggcgc
      841 ggcgaaccaa gggcaggtct acgagagctt caacatggcc gagctgtgga aactgccggt
      901 cgtctacgtc atcgagaaca accgctatgc catgggcacg gcggtgaccc gttccacggc
      961 ccagaccgac ctctccaagc gcggcctgtc cttcaacatt ccgggcgtcg aggtcgacgg
     1021 catggacgtg cgcgcggtaa aggccgccgg cgaagaggcg cttgcctggt gccgcgccgg
     1081 caagggaccg accatcatcg agatgatgac ctaccgctat cgcggccatt cgatgtcaga
     1141 tccggccaag taccggacca aggaggaggt cgatagggtg cgcaccgagc acgatccgat
     1201 cgagcaggtg cgcgcacggc ttctcgccaa gaaatgggcg gacgaggacg agctgaagaa
     1261 gatcgacgct tcagtgcgtg ccgtggtcaa tgaagcggcg gaattcgcta ccaacgaccc
     1321 ggaacctgat ccggcggaac tctatacgga cgtctatcgg tgagagccat tatttttgcg
     1381 cctgctcgcg ggcgcgactg acgagtccga ttgccatgcc gatccaggtg ctcatgccag
     1441 cgctgtcgcc cacgatggag aagggcaacc tcgccaagtg gctgaagagg gagggcgacg
     1501 ccatcaagac cggcgacgtc atcgccgaga tcgagaccga caaggcgacg atggaggtcg
     1561 aggccatcga cgacggcacg ctgggtaaga tcctggtgcc cgaaggcacc aacgacgtcg
     1621 ccgtcaacac gccgatcgcg acgatccttg ccgaaggcga ggacaggagt gcactcgcac
     1681 ccaccgctcc cgccccagcg ggcgacggta acggggcggc agccccagcg cgggcgaaag
     1741 ccgaggcgac tcaaccggcg cgcccgcagc acggcgccga atccgctccc cccgcggcgg
     1801 tcgagccggc caaagcgaag gcgccggcgc cgccgaagac cgctctcgcc gaaccgaccc
     1861 cgcgccccgc ggtcgccgcg cccgacgttc ccgaaggcac cgagctggtc acgatgacca
     1921 tgcgcgaagc gttgcgcgac gccatggccg aggagatgcg ccgcgacggc gacgtcttca
     1981 tcatcggcga ggaggtcgcc gaataccagg gcgcgtacaa ggtgacccag gggctgctgc
     2041 aggaattcgg cgcgcggcgc gtcatcgata ccccgatcac cgagcatgcc ttcaccggcc
     2101 tcggcgtcgg cgccgcgctc gcgggcctca agccgatcgt cgagttcatg accttcaact
     2161 tcgccatgca ggcgatggac catctgatca actcggcggc gaagacgcgc tacatgtccg
     2221 gcgggcaggt cgaggtcgcc atcgtcttcc gcggcccgaa tggcccggcc gcccgcgtcg
     2281 gcgcccaaca cagccaggat ttttcctcct ggtacgcgca tgtccccggc ctcaaagtgc
     2341 tggcaccgtc gaccgcggcc gatgccaagg gtctgctcaa ggcggcgatc cgcgatccca
     2401 atccggtaat tttcctcgag aacgagattc tctacggcgt ctcttcaccg gtgccgaagc
     2461 tcgacgacta cgtgctgccg atcggccgcg cccgcgtcgt gcgccccggc aacgacgtga
     2521 cgctggtcgc ctggtcgatc ggcatgacct acgcgctcaa ggccgccgac gaactcgcca
     2581 aggcgaacat ctctgccgag gtcatcgacc tgcgcgcgct caagccgatg gatagcgaaa
     2641 ccgtcatcga gtcggtgaag aagaccggac gcctcgtcac cgtcgaggag ggctggaagc
     2701 agtccggcgt cggcgccgag attgccgcgc gggtgatgga ggaggcgttc gactatctcg
     2761 acgcgccggt cgcacgcgtt tccggcaagg acgtgccgat gccctacgcc gcgaacctgg
     2821 aaaagctggc gctgccttcc gtcgccgagg tcgtcgaggc ggcgagggca gtcacctacc
     2881 gctgagctgc gcccgatcga gcttcccgcg tcatgcccat caacatcttc atgccggcgc
     2941 tgtcgcccac gatggaaaag ggcaatctcg ccaaatggct gaagaaggaa ggcgacgcgg
     3001 tcaagaccgg cgacgtcatc gccgagatcg agaccgacaa ggcgaccatg gaatacgaag
     3061 c
//
LOCUS       DATMQB010000192        10212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2857937, whole genome shotgun sequence.
ACCESSION   DATMQB010000192 DATMQB010000000
VERSION     DATMQB010000192.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10212
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2857937"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..376
                     /locus_tag="VNY79_05870"
     CDS             <1..376
                     /locus_tag="VNY79_05870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX72006.1"
                     /translation="VISATYGKDPTDPQWQDAPDMKEWMAWMKKYYPAGNITDANNTY
                     GYGVAYLMVAVLKACGDNLTRENVMNEAAKIHIQGGPLSLPGITISTSATDYAPIKQM
                     QMMKFDGNTWNLFGEVISGSGT"
     gene            complement(380..1054)
                     /locus_tag="VNY79_05875"
     CDS             complement(380..1054)
                     /locus_tag="VNY79_05875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HWX72007.1"
                     /translation="MPYRRTENVARRLAARHDAIIAAARQTASEGGMAAVQIAPVAAR
                     AGVAAGTVYRYFPAKSDLVAALLAEISEREIAALRRAADAAPGPLSALAAAIMTFAAR
                     ALRSRRLTFATMAEPVEAEAEAARLALRKALAAEFSARIVAAVAGGRLPEQDAALAAA
                     ALVGLLVEGLIGPLAPDASGREREIVQSLTLTALRALGVADARARGLVVQTVIPLGGG
                     AAEQAS"
     gene            complement(1110..2792)
                     /locus_tag="VNY79_05880"
     CDS             complement(1110..2792)
                     /locus_tag="VNY79_05880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HWX72008.1"
                     /translation="MRGKDNTRTAAEVLIDQLRIHGVRHVFCVPGESYLAALDAFHDS
                     DIGVTVCRQEGGAAMMAEAVGKATGRPGVCFVTRGPGATNASPGIHIARQDSTPVVMF
                     VGQVAREAREREGFQELDYRAVFGSMTKWATEIEDPARVPEMVSRAFHTAANGRPGPV
                     VVSLPEDMLTERIAVNDAPAFAPMETSPGDPEMARLGELVAAARSPMMILGGSRWSQA
                     ACDAVARFAEKLALPVCTTFRRLHLFDALHPCYAGDLGIGPNPKLLERIKAADLVILV
                     GGRMGELPSQGYTLFDIPRPQMTFAHVHPGAEELGRVYSAHLPIHATPTAFAAALDRL
                     ELPSAPRGQAAAAHADYLAWTEQPTEQPGAVNLGAVMVWLRENLPADAILCNGAGNYA
                     AWIHRFFRFRRFGQHIAPTSGSMGYGVPAAVAMKRLYPERPVICVAGDGDFLMNGQEF
                     ATAVQYGLPFIVLIADNGIYGTIRMHQEREYPGRIIATELRNPDFAAYARAFGGFGAS
                     VERTADFPAAFNEAQASGKPAIIRLAIDPEAITPATTLAKIRAKSLAEKSPG"
     gene            2920..4455
                     /locus_tag="VNY79_05885"
     CDS             2920..4455
                     /locus_tag="VNY79_05885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HWX72009.1"
                     /translation="MNNESQEEVLAFLGDPETHGDQKVHRIDTHAAAVFLAGDRALKI
                     KRAVRFPFLDYSTLGKRREACEAELAVNAPYAPEIYRSVKAITREADGRLAIAGSGSA
                     VEWAVEMRRFDEQRTLDHLAGEIDDALAEALGRAVAAAHAKAPAVEAKVWIDAVGSYI
                     DEHTEAFGAHTDIFPAAEIDALARVSRTAYDRIVPLLTERGRRGLIRRIHGDLHLGNI
                     VLIDGRPVLFDAIEFSDIIASGDVLYDLAFLLMDLLERGFTRPASIVFNRYLAETRRA
                     DDLDALAALPFFLSMRAAIRAKVSAARMELAPPAERPPIARAARGYFALALEAIAPPA
                     PKLVAVAGLSGTGKTVLARAVAPRLKPMPGAVIVRSDIERKVLFGIAENEKLPADAYE
                     EEVTARVYATLTEKARRIVAAGHSAIVDAVFADPRERAGLEAMAKSANIPLRGLFLTA
                     DVETRVARVGSRARDASDADASVARAQERYDLGPLEWTAVDASGTSAATLARARAALP
                     QLD"
     gene            4514..5167
                     /gene="petA"
                     /locus_tag="VNY79_05890"
     CDS             4514..5167
                     /gene="petA"
                     /locus_tag="VNY79_05890"
                     /EC_number="7.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045275 - respiratory chain complex III
                     [Evidence IEA];
                     GO_function: GO:0008121 - ubiquinol-cytochrome-c reductase
                     activity [Evidence IEA];
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_process: GO:0009060 - aerobic respiration [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ubiquinol-cytochrome c reductase iron-sulfur
                     subunit"
                     /protein_id="HWX72010.1"
                     /translation="MASSEATTPDGIHPASTRRDFLYIATGTAVTVGAAAVLVPLIAQ
                     MNPDASTLAAGGSVDLDLGNIEPGQQVVIRWRERPIFVFHRTPQNLQTLQDQRLLSQL
                     ADPNSSQLQQAPYAANWHRSIKPEFGILVGICTHLGCIPMFHPQPNASAPTTDWLGGY
                     FCPCHGSKYDAAGRVFSGVPAPYNLPVPPYRFVSDSTIRVGENPPGSNFDFASIRQL"
     gene            complement(5218..7020)
                     /locus_tag="VNY79_05895"
     CDS             complement(5218..7020)
                     /locus_tag="VNY79_05895"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HWX72011.1"
                     /translation="MNDVDRSNRRQQPATRVDPITGAVIQGALENIAIEMGHKLMRMS
                     YSSIIRESEDFGAALTDAEGRQLCECKMSTPLQSGPIPGYVRGIRKRLDARGEVLRPG
                     DVIMHNDPYAGASHGPDVAFCVPVFDGSDLIGFSVTTAHHLDIGAHTPGSCGIVDAVD
                     AYAEGLQFKAIKVVDQGWRNEAVWHMVRDNIRIPDLVVGDMNAQIAAAQIGAQRFLDL
                     VRRYGRDTVNGAYEDVMDYSERLMRGAIRNIPDGVYAAESLIDGYLDDPDPARRDLKI
                     AVAIKVSGDELTVDLTGTSPQVSDRPINMPLEGTVDCAIWLTLRSILLDSAVYGNIPQ
                     NSGLTRPITIVAPKGTLANPIFPAPTIARFCPGNALADTVMKALAPAVPQQVSAGIGN
                     LRVIAFSGTINEQPWVHMEILEGSYGGRHGLDGMDAVDTLYANTRNNPVEDIESHLPL
                     RVNRYELRENVIAPGEWRGGVGSVRVFTYLTDGGFSVEGDGQKYLPWGFAGGSEGLPG
                     ELIMETQTGKRLALPSKVPYQKVARGDRLLAYGPSGGGYGDPFRRDPAAVLDNVLDGL
                     LSAEIARTHYGVAITDGVVDAAATERLRTERRAS"
     gene            7302..8450
                     /locus_tag="VNY79_05900"
     CDS             7302..8450
                     /locus_tag="VNY79_05900"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HWX72012.1"
                     /translation="MAFDIRTLAVPTAGFATFLNLYSPQALLPRLSHEFNVSAGEIST
                     LITAATAAIALTAPFTGALADVLGRKRLITASIFAIVVPTLLMSFASSVPQLVVLRFV
                     QGMLVPPIFTVTVAYIGDEWPPGEVTRVAGLYTAGSSCGGFCGRLVPGFVTDLLDWRA
                     AFAANALLTLAVAIAVAVMLPRERHFVRSEGLLASSRQMLAHLRNPRLLAIYAVGFGV
                     LFNFTSVFTYVNFHLAAPPYLFSPALLGAIFVTYLAGSLLVPWIGRGVSLFGRRRFVL
                     GIVAVWVAGALLLLAPPVSIIIAGLAVCAACGLLCQAVSTSYVITIVKEGRSSAVGLY
                     ASIFYIGGSIGAFLTGFAWNAAGWTGCVAMILAMQLIVAAIVALAWER"
     gene            8580..9275
                     /locus_tag="VNY79_05905"
     CDS             8580..9275
                     /locus_tag="VNY79_05905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RraA family protein"
                     /protein_id="HWX72013.1"
                     /translation="MRLKGNTMVTESQFAFLRSIDTPTVCNLIEIVAPERRGAGYTTS
                     HLRCPFPDLPPMVGFAKTATIRARDAVSGPGYMQKRMDYLDYVAAAPHPSVVVIEDKD
                     EPAGYGAFWGEVQTNVHKALGCLGVVTNGSIRDIPAVAEGFQMLAGSISPSHAYVHVV
                     DLGVSVTIHSMEVKSGDLIHADRHGAVVVPVEKIDAMAAALDGLMKHEARIIAAARAP
                     GATVESIKAAMKG"
     gene            complement(9303..>10212)
                     /locus_tag="VNY79_05910"
     CDS             complement(9303..>10212)
                     /locus_tag="VNY79_05910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018457113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HWX72014.1"
                     /translation="RFQVRHGLEATGSVSAQTLRALNVPVGARMKQLEASLERLLGMD
                     FVFAERYVVVNIPAAFAEAIAHDKVERRYRVVVGKTDKPSPTLTAYITAVDLNPTWTV
                     PLSITKNEIRGRMRRDPNYLSRMHMRVLGARDESIDPRSVDWSSDRSPNFTIRQDSGA
                     WNALGNVKVDMPNPYSVYMHDTTSRNLFANDYRFDSHGCTRVDNVRDLAAWILEDVPG
                     WNRAAIDAGIAAGERRAINLPHKMPVAWVYLTGWVTRDGIIMFRDDVYKHDEALDRDA
                     LADAAAGGFVAPVRREVKQSSNLDSR"
BASE COUNT         1652 a         3427 c         3390 g         1743 t
ORIGIN      
        1 cgtcatctcc gcgacctacg gcaaggaccc gaccgacccg cagtggcagg acgcgcccga
       61 catgaaggaa tggatggcgt ggatgaagaa atactatcca gccggcaaca tcaccgacgc
      121 caacaacacc tacggctacg gtgtggccta cctcatggtc gcggtgctca aggcctgcgg
      181 cgacaacctg acccgcgaga acgtgatgaa cgaggcggcg aaaatccaca ttcagggggg
      241 gccgttgtcg cttcccggga tcaccatctc gaccagcgcc accgactatg cgccgatcaa
      301 gcagatgcag atgatgaagt ttgacggcaa cacctggaac ctgttcggcg aggtgatctc
      361 gggttctgga acgtagccgc tacgaggcct gctcggcggc gccgccgccg agcggtatga
      421 cggtctgcac gacaaggccg cgggcgcgcg cgtcggcgac gccgagcgcg cgcaaggcgg
      481 tgagtgtcaa ggactgcacg atctcgcgtt cgcgtcccga cgcatcgggc gcgagcgggc
      541 cgatcagccc ctcgacgaga aggccgacca aggccgccgc cgccagcgcc gcatcctgct
      601 cgggcagacg gccgccggcc acggccgcga cgatgcgcgc agaaaactcc gcggcgagcg
      661 ctttgcgcag cgcaagccgc gccgcttcgg cttcggcttc gaccggctcg gccatcgttg
      721 cgaaggtgag gcggcggctg cgcaacgcac gcgcggcgaa ggtcatgatc gccgcagcaa
      781 gcgcggaaag cgggccgggc gcggcgtcgg cggcacggcg cagcgcggcg atctcacgct
      841 cggaaatttc ggcaaggagc gccgcaacca gatcgctttt cgcagggaag tagcgataca
      901 ccgttcccgc ggcaacgccg gcgcgggcgg cgaccggcgc gatctgcacc gccgccatgc
      961 cgccttcgct cgcggtctgc cgggcagcgg caatgatcgc gtcatgccgt gcagccagcc
     1021 gtcgggcgac gttctcggtg cggcgatagg gcattgagcc ggtcgcgaag gagaatcgtg
     1081 aaagagccta gcaaacgctg aggcacgatt cagccgggac tcttctccgc cagcgacttg
     1141 gcgcggatct tggcgagcgt cgtggccggc gtgatcgcct ccggatcgat cgccaggcgg
     1201 atgatggccg gcttgccgga tgcctgtgcc tcgttgaacg ccgccgggaa gtcagcggtc
     1261 cgctcgaccg aagccccgaa gccgccgaaa gcgcgggcgt aggcggcaaa atccgggttg
     1321 cgcagctcgg tggcgatgat gcgccccgga tattcgcgct cctggtgcat gcggatggtg
     1381 ccgtagatgc cattgtcggc gatcaggacg atgaacggca ggccgtattg cacggcggtc
     1441 gcaaattcct ggccgttcat gagaaaatcg ccgtcgccgg cgacgcaaat gacgggtcgc
     1501 tccggataga gccgcttcat ggccacggcc gccggcacgc cgtaacccat cgagcccgaa
     1561 gtcggggcaa tatgctggcc gaaacggcga aagcggaaga agcgatgaat ccaagcggcg
     1621 tagtttccgg caccgttgca gagtatggcg tcggcgggca ggttttcgcg cagccacacc
     1681 atgactgcgc cgaggttgac cgcacccggc tgctcggtcg gttgctccgt ccaggcaaga
     1741 tagtcggcat gagcggccgc cgcctgaccg cgcggcgccg atggaagctc gaggcgatcg
     1801 agtgcggcgg cgaacgccgt cggcgtcgcg tggatcggca gatgcgcgct gtacacgcgg
     1861 ccgagctcct cggcgcccgg atggacatgc gcgaacgtca tctgcggccg cggaatatcg
     1921 aacagcgtgt agccctgcga cggcaattcc cccatccggc cgccgaccag gatcacgagg
     1981 tcggcggcct tgatccgttc gaggagcttc ggattggggc caatgccgag atcgccggcg
     2041 tagcagggat gaagggcgtc gaagaggtgc agacgtcgga atgtggtgca caccggcagc
     2101 gcaagcttct ccgcgaaacg cgcgacggcg tcgcaagccg cctgcgacca gcggctgcca
     2161 ccgaggatca tcatcgggct gcgcgcagcg gcgacaagct cgccgagccg cgccatctcg
     2221 gggtcaccgg gcgaggtctc catcggcgcg aaggccggtg catcgttcac ggcaatgcgc
     2281 tcggtcagca tgtcctcggg caggctgacg acgaccggtc cgggccgccc gttcgccgcg
     2341 gtgtgaaagg cgcgcgagac catctccggc acgcgcgccg ggtcctcgat ctccgtcgcc
     2401 catttcgtca tcgagccgaa cacggcgcga taatcgagct cctgaaaccc ctcgcgctcg
     2461 cgcgcttcgc gcgcgacctg gccgacgaac atgacgacgg gcgtcgaatc ctggcgggcg
     2521 atgtggatgc cgggcgaagc attggtggcg ccgggcccgc gggtgacgaa gcagacgccc
     2581 gggcggccgg tcgccttgcc gaccgcttcg gccatcatgg cggcgccgcc ctcctgccgg
     2641 cacaccgtga cgccgatatc gctgtcgtgg aaggcgtcga gcgcggcgag gtaactctcg
     2701 cccggcacgc agaagacatg gcgcacaccg tgaatgcgca attggtcgat cagaacctcg
     2761 gcggcggtcc gcgtattgtc tttaccgcgc atcaaagcct cccgcgtcgc gagatttgag
     2821 tatgctcgca agaaattcac atcgtcacag tgcgcttacc gtttcacttt gtcggccacg
     2881 acggatcaag gtcaatacgc aggttaaggt ttcggcgaca tgaacaacga gagccaggag
     2941 gaagtgctgg cctttctggg cgatcccgag acccacggcg accagaaggt ccaccgcatc
     3001 gatacacacg cggcggcggt gtttctcgcc ggcgatcgcg ccctcaaaat caagcgcgcg
     3061 gtgcgctttc ccttcctcga ctattcgacg ctcggcaagc gcagagaggc gtgcgaagca
     3121 gagcttgccg tcaacgcccc ttacgcgccg gaaatctacc gcagcgtcaa ggcgatcact
     3181 cgcgaagccg acggccggct cgcgatcgcc ggctccgggt ccgccgtcga atgggcggtc
     3241 gagatgcgcc gtttcgacga gcagcgcacg ctcgatcacc tcgccggcga aatcgacgac
     3301 gcgctcgccg aggccctcgg gcgtgcggtc gccgccgccc acgcgaaggc gcctgcggtc
     3361 gaggcaaagg tgtggatcga cgcggtcggt tcttatatcg acgaacatac cgaggcgttc
     3421 ggggcgcaca cggatatctt cccggcggcg gagatcgacg cgctcgcgcg agtgagccgc
     3481 accgcctatg accgcatcgt ccccctcctt accgagcgcg gccgccgcgg gcttatccgc
     3541 cgcatccacg gcgatcttca tctcggcaat atcgtcctga tcgatggcag accggtgctc
     3601 ttcgacgcca tcgaattcag cgacatcatc gcgtcgggcg acgtcctcta tgacctcgcc
     3661 ttcctgctga tggacctcct cgagcgcgga ttcacgcggc ctgcgagcat cgtgttcaac
     3721 cgctatcttg ccgagacgcg gcgcgccgac gacctcgacg cgcttgctgc gctgccgttc
     3781 tttttgtcga tgcgcgcggc gatccgcgcc aaggtcagtg ccgcgcgcat ggagcttgcg
     3841 ccgcccgcgg agcggccgcc gattgcgcgc gcggcgcgcg gctacttcgc cttggccctc
     3901 gaggcgatcg cgccgccggc gccgaaactc gtcgccgtcg ccggcctttc cggcaccggc
     3961 aagaccgtgc tcgcgcgggc ggtcgcgccg cggctcaagc cgatgccggg cgcggtcatt
     4021 gtgcgctccg atatcgagcg caaggtgctg ttcggcattg ccgagaacga gaaactgccc
     4081 gccgatgcct atgaggagga agtcaccgct cgcgtctacg caacgttgac ggagaaggcg
     4141 cgccgcatcg ttgccgctgg ccattcggcg atcgtcgacg ccgtgtttgc cgatccgcgc
     4201 gagcgtgccg gcctcgaagc gatggcgaaa tccgcgaaca ttccgctgcg cggactgttt
     4261 ctcaccgccg acgtcgagac ccgggtcgcc cgggtcggct cgcgcgcgcg cgacgcttcc
     4321 gatgccgacg ccagcgtggc gcgggcacag gagcgttacg acctcggacc gctcgaatgg
     4381 acggctgtcg atgcctccgg aacgtcggcg gcaaccctgg cgcgggcacg cgccgcgctc
     4441 cctcagctcg attgactggc gccgcgccgc gccaatataa gccgcgggcc ccgtgcgccg
     4501 gaaaggcacg atcatggcga gcagcgaagc gactactccg gacggcatcc accctgcctc
     4561 gacgcgccgc gatttcctct acatcgcgac cggaaccgcc gtcaccgtgg gcgcggcggc
     4621 ggtcctcgtg ccgctcatcg ctcagatgaa tcccgacgcg tcgacccttg cggcgggcgg
     4681 ctcggtcgat ctcgacctcg gcaatatcga gcccggccag caggtggtca ttcgctggcg
     4741 cgagcgcccg atcttcgtgt tccaccgcac gccgcagaac ttgcagacgc tgcaggatca
     4801 gcggctgctc tcgcaactcg ccgatccgaa ttcgtcgcag ttgcagcagg cgccctatgc
     4861 cgccaattgg catcgctcga tcaagccgga gttcggcatc ctggtcggca tctgcacgca
     4921 tctcggctgc attccgatgt ttcatccgca gccgaacgca tcggcgccga ctaccgactg
     4981 gctgggcggc tacttctgtc cctgccacgg ctcgaaatac gacgcggccg gccgggtgtt
     5041 ctccggcgtg cctgcgccct acaacctgcc ggtgccgccg tatcgcttcg tgagcgattc
     5101 cacgatcagg gtcggcgaaa acccgcccgg ctcgaatttc gatttcgcct cgatccgcca
     5161 gctctgaaac gtaccgctcg ttgcgcaacg agcggcacga gacggaccct caagctctca
     5221 gctcgcgcgc cgctccgtgc gcaaccgctc ggtcgcggcc gcgtccacca cgccgtcggt
     5281 gatcgctacg ccgtagtgcg tgcgcgcgat ttccgccgag agcaggccgt cgagcacgtt
     5341 gtcgagcacg gctgcggggt cgcggcggaa cgggtctccg tagccgccgc cgctcgggcc
     5401 gtaggcgagc aggcggtcgc cgcgcgccac cttctggtag gggactttgg acgggagcgc
     5461 caagcgcttc ccggtctggg tctccatgat cagctcgccc ggaaggccct cgctgccacc
     5521 ggcaaatccc caggggaggt atttctggcc gtcgccttcg accgaaaagc cgccatcggt
     5581 gaggtaggta aacacgcgca ccgagcccac gccgccgcgc cactcgccgg gcgcgatcac
     5641 gttctcacgc aattcgtagc ggttcacgcg cagcggcagg tgcgactcga tgtcctcgac
     5701 cggattgttg cgcgtgttgg cataaagcgt gtcgaccgca tccatgccgt cgagaccgtg
     5761 ccgcccgccg tagctgcctt cgagaatctc catatgcacc cagggctgct cgttgatggt
     5821 gccgctgaag gcgatgacgc gcagattgcc gatcccggcg ctcacctgct ggggaacggc
     5881 cggagcaagc gccttcatca ccgtatcggc gagcgcattg ccggggcaga agcgggcgat
     5941 ggtcggcgcc ggaaagatcg ggttggcgag cgtgcccttc ggcgccacga tcgtgatcgg
     6001 acgggtaagc ccgctgttct gcggaatgtt gccgtagacc gcgctatcga gcaggatcga
     6061 gcgcagcgtc agccagatcg cacaatcgac ggtaccctcg aggggcatat tgatgggccg
     6121 gtcggagacc tgcggcgagg tgccggtcaa gtcgacggtg agttcgtcgc cgctgacctt
     6181 gatggcgacg gcgatcttca gatcgcgccg cgccggatca ggatcgtcga ggtagccgtc
     6241 aatcaggctc tcggcggcat agacgccgtc gggaatattg cggatcgcgc cgcgcatcag
     6301 cctctccgag tagtccatca cgtcttcgta ggcgccgttc accgtgtcgc ggccgtagcg
     6361 gcgcacgagg tcgaggaagc gctgcgcgcc gatctgcgcc gcagcaatct gagcgttcat
     6421 gtcgccgacg accaagtcgg ggatacggat gttgtcgcgc accatgtgcc agaccgcctc
     6481 attgcgccag ccctgatcga cgaccttgat cgccttgaac tgcagcccct cggcgtaggc
     6541 gtcgaccgca tcgacgatgc cgcaacttcc cggcgtgtgc gcgccgatgt cgagatggtg
     6601 cgccgtggtg accgagaagc cgatcaggtc gctgccgtcg aacactggca cgcagaacgc
     6661 cacgtcgggg ccgtgcgacg cgccggcata aggatcgttg tgcatgatca cgtcgcccgg
     6721 acggagtacc tcgccccgcg catcgagtcg cttgcggatg ccgcggacgt agcccgggat
     6781 cggaccagac tgcagcggcg tactcatctt gcactcgcac aactgccgtc cctcggcgtc
     6841 ggtcagcgcc gcgccgaaat cctcggattc gcggatgatg ctcgaatagc tcatgcgcat
     6901 gagcttatgg cccatctcga tcgcgatgtt ctccagcgcg ccctggatca cggcgccggt
     6961 gatcggatcg acgcgcgtcg ccggctgctg cctgcggttg gagcggtcta cgtcgttcat
     7021 cgggcatccc ctgcgatcct gagaatgatc gggcgacagt ggcgctggct cggcaccgat
     7081 cgtctttgca atgctccggc tgcgtgtcgc cgcttgtcgt tgtggcttgc cgttctgggt
     7141 tgataaggct gcgcctctcg ccggccaagg cgccgcatca tccgcggctc gaatcgagaa
     7201 ggcaacagtg aaggcggtgt gcgccccgtc atgcacgatc gcggggatgc gtattccgcg
     7261 cgcaggcgtg ctttcccgcc gaggcttgcc cataatggcg catggctttc gacatccgca
     7321 cgcttgcggt gcccacggcg ggattcgcca ccttcctcaa tctctattcg ccgcaggcgc
     7381 tattgcccag gctgtcgcac gaattcaacg tcagcgccgg cgaaatcagc acattgatca
     7441 ccgccgcgac cgcggcgatc gcgctcactg caccgttcac cggcgcgctc gccgatgtcc
     7501 tcggccgcaa gcgactgatc acggcttcga tctttgccat cgtggtgccg acgctgctca
     7561 tgagtttcgc gtcaagcgtg ccgcaactcg tggtcttgcg cttcgtgcag gggatgctgg
     7621 tgccaccgat cttcaccgtc acagtcgcct atatcggcga cgaatggccg ccgggcgagg
     7681 tgacccgggt cgccgggctc tatacggcgg gatcgagctg cggcggcttt tgcggccggc
     7741 tcgttcccgg cttcgtcacc gacctgctcg attggcgcgc cgccttcgcc gccaacgcgc
     7801 tgctcacgct cgccgtcgcc atcgctgttg cagtcatgct gccgcgcgag cgccatttcg
     7861 tgcgctcgga gggcctcctc gcctcgtcac ggcagatgct cgcgcacctg cgcaacccgc
     7921 gcctgcttgc gatctacgcc gtcggcttcg gcgtgctgtt caacttcacc tctgtcttca
     7981 cctacgtgaa tttccatctg gcggcgccgc cctatttgtt ttcgccggcg ctccttggcg
     8041 ccattttcgt cacctacctt gccggcagcc tcctggtgcc ctggatcggg cgcggcgtct
     8101 cgctgttcgg ccgccgccgc ttcgtgctcg gcattgtcgc cgtctgggtc gccggcgctc
     8161 tgctgctgct cgcgccgccg gtcagcatca tcattgccgg gctcgcggtg tgcgccgcct
     8221 gcgggctgct gtgccaggca gtttcgacca gctacgttat caccatcgtc aaggaggggc
     8281 gctcgtcggc cgtcggtctc tacgcctcga tcttctacat cggcggcagc atcggcgcgt
     8341 tcctcaccgg ctttgcctgg aacgccgctg gctggaccgg ctgcgtcgcg atgatcctgg
     8401 cgatgcagct catcgtcgcc gcgatcgtcg ctctcgcctg ggagcggtga aggagcatga
     8461 tggcacgatt tccgaaaatc cgcgcccgct cgtccccgcg aggtcgggga gccagtattt
     8521 gctgagcgag gtgccctccc ctggattccc gctttcgcgg aaatgagcgt gaatgtccaa
     8581 tgcgtttgaa aggaaacacc atggtgacgg aaagccaatt cgcgtttctg cggtcgatcg
     8641 atacgccgac cgtctgcaat ctgatcgaga tcgtggcccc cgagcggcgc ggcgccggct
     8701 acaccacgag ccacctgcgt tgtccgtttc cggacctgcc gccgatggtc ggcttcgcca
     8761 agaccgcaac gatccgcgcc cgcgacgcgg tgagcggccc gggctacatg cagaagcgga
     8821 tggactatct cgactatgtc gctgcggcgc cgcatccgag cgtcgtggtg atcgaggaca
     8881 aggacgagcc cgccggctac ggtgcgttct ggggcgaggt gcagaccaac gtgcacaagg
     8941 cgctcggctg ccttggcgtc gtgaccaacg gatcgatccg cgacatcccg gcggtcgccg
     9001 agggcttcca gatgctcgcc ggctcgatct cgccgtcgca tgcctacgtg cacgtcgtcg
     9061 atttgggcgt ttccgtcacc atccacagca tggaggtcaa aagcggcgac ctcattcacg
     9121 ccgatcgcca cggcgccgtc gtcgtgccgg tcgagaagat cgacgcgatg gcggcggcac
     9181 ttgatggcct gatgaagcac gaggcgagga tcatcgccgc cgctcgcgcg cccggcgcga
     9241 cggtcgagag catcaaagcg gcgatgaaag gttagctggc gcccgcagcg cagcgaatgc
     9301 gtctagcggc tgtcgaggtt tgacgactgc ttcacctcgc gccgcaccgg cgcaacgaaa
     9361 ccgccagccg cggcgtcggc aagcgcgtcg cggtcgagcg cctcgtcgtg cttgtagacg
     9421 tcgtcgcgga acatgatgat gccgtcgcgc gtcacccaac cggtgagata gacccaggcg
     9481 accggcattt tgtgcggcag gttgatggcc cgccgctcgc cggcggcgat gccggcatcg
     9541 atcgcggcgc ggttccagcc cggcacgtct tcgagtatcc aggcggcgag atcgcgcacg
     9601 ttgtcgacgc gcgtgcagcc gtgcgagtcg aagcggtagt cgttggcaaa cagattgcgc
     9661 gaagtggtgt cgtgcatgta cacggaatac ggattgggca tgtcgacctt gacgttgccc
     9721 agtgcgttcc aggcgccgga atcctggcgg atggtgaagt ttggcgaacg gtcggatgac
     9781 cagtcgactg atcgcggatc gatactctcg tcgcgggcgc caagcacgcg catgtgcatg
     9841 cggctgagat aattcgggtc gcggcgcata cgcccgcgga tctcgttctt ggtgatcgag
     9901 agcggaacgg tccaggtcgg gttgagatcg accgccgtga tgtaggcggt cagcgtcggc
     9961 gacggcttgt cggtcttgcc gacgaccacg cgatagcgcc gctcgacctt gtcatgggcg
    10021 atcgcctcgg cgaaagcagc gggaatgttc accacgacgt agcgctcggc gaacacgaaa
    10081 tccatgccga gcaagcgttc gagcgaggct tcgagctgct tcatgcgcgc gccgacgggg
    10141 acgttgaggg cgcggagcgt ctgggcgctg acgctgccgg tcgcctcgag gccgtggcgc
    10201 acctgaaagc gc
//
LOCUS       DATMQB010000193         3071 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4401238, whole genome shotgun sequence.
ACCESSION   DATMQB010000193 DATMQB010000000
VERSION     DATMQB010000193.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3071)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3071)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3071
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4401238"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..283
                     /locus_tag="VNY79_05915"
     CDS             <1..283
                     /locus_tag="VNY79_05915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HWX72015.1"
                     /translation="VEAVQRRGVRVIVVSTISTQPPMVADELRRQADQFVDIMELQAK
                     IGRDPSERPMREPREGREPREPRHTPQFLQRSASTQRVGVEVEDEFDED"
     gene            292..945
                     /locus_tag="VNY79_05920"
     CDS             292..945
                     /locus_tag="VNY79_05920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HWX72016.1"
                     /translation="MAAMTRPSGKPGRDCPRCPRLVAFREAWREREPDWFNAPVPSFG
                     PVDARLLIVGLAPGLRGANRTGRPFTGDYAGDLLYATLEEFGFARGSYEARPDDGLTL
                     IDCRITNAVRCVPPENKPTPDEIATCRSYLAATIKEMSRLRAIVALGRVAHDTFIAAQ
                     EARRADYPFSHGCAQTIGAITLFDSYHCSRLNTNTGVLTPQMFRDVFARVRRHLDVG"
     gene            complement(977..1213)
                     /locus_tag="VNY79_05925"
     CDS             complement(977..1213)
                     /locus_tag="VNY79_05925"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN domain-containing protein"
                     /protein_id="HWX72017.1"
                     /translation="MARHGAGHLRERILPFDLSAARRWGLLSAALGNESADLMIAATA
                     LEHGLTVVTRNVADFAPAHSSLRNLVHRSEGAAG"
     gene            complement(1132..1401)
                     /locus_tag="VNY79_05930"
     CDS             complement(1132..1401)
                     /locus_tag="VNY79_05930"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72018.1"
                     /translation="MYLIDTVTLSELRRRRRDTRLVAWFERQRTVDLFVSVISIREIE
                     RGIAAQRASNPGFAAALARWLDTVLAIYASASCPSIYRRRDAGAC"
     gene            complement(1401..1637)
                     /locus_tag="VNY79_05935"
     CDS             complement(1401..1637)
                     /locus_tag="VNY79_05935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0110001 - toxin-antitoxin complex
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system Phd/YefM family
                     antitoxin"
                     /protein_id="HWX72019.1"
                     /translation="MQDAKNRFSEVVEAAHRTPQMVTKHGKPAVVVVDAKEYERLRHL
                     GRTKAPSFAELLLAIPQDGGSFARLKARPRDLKF"
     gene            complement(1719..2600)
                     /locus_tag="VNY79_05940"
     CDS             complement(1719..2600)
                     /locus_tag="VNY79_05940"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72020.1"
                     /translation="MTKFVVAPHFRLQEWVAEEKGYFAAEGLDYEFRETMDSTSGSGH
                     QLGNKVRAYQTLEAGRACNVSGACHWTMNVAASNGYGKLYAECYSVSPCGIFVPPDSP
                     VRTPADLAGVPISVGYQSGSHYATIQGLEQYLTPEEIKLSFNDGLLFSRMEMLIDRKL
                     PAASLFSGPYYFAEQLGFRKIIDITYMMASMIAGTPDPEDVRKYFRALRRAQRDIDLR
                     PELYTHYYRREFPVRFHDQMDTRRWGPGERLVFEPYSKETFEQSFEWIEQHGIFPRSE
                     MGGGDYEAAIFHEAAHA"
     gene            complement(2670..>3071)
                     /locus_tag="VNY79_05945"
     CDS             complement(2670..>3071)
                     /locus_tag="VNY79_05945"
                     /EC_number="1.11.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009466686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HWX72021.1"
                     /translation="LYPRTGVPGVDLPPGWNDIPGARGCTPQSCGFRDHFAELNGLGV
                     SHLFGLSTQDTNYQREAAERLHLPFAILSDAGLAFTRAMKLPTFTVAGMTLLKRMALV
                     VDDGIIGKAFYPVFPPDQNAAEVVAWLREHR"
BASE COUNT          537 a         1022 c          993 g          519 t
ORIGIN      
        1 ggtcgaagcg gtgcagcggc gcggcgtgcg cgtcatcgtc gtctccacca tctcgaccca
       61 gccgccgatg gtggccgacg agctccgccg ccaggccgac cagttcgtcg acatcatgga
      121 gctgcaagcc aagatcggcc gcgatccttc cgaacgcccg atgcgcgagc cgcgcgaagg
      181 cagggagccg cgcgagccgc gccatacgcc gcaattcctc cagcgcagtg cctccaccca
      241 gcgcgtcggg gtcgaagtcg aagacgaatt cgacgaagat tgatccggcc gatggctgcg
      301 atgacgcgcc cgagcggcaa gcccggtcgc gattgtccgc gctgcccccg tcttgtcgcc
      361 tttcgcgagg cctggcgcga acgcgagccc gactggttca acgcacccgt cccctccttc
      421 ggccctgtcg acgcgcgcct gctgatcgtc ggcctcgctc ccggactgcg cggcgccaac
      481 cgcaccggtc ggccgttcac cggagactat gccggcgatc tcctctacgc gacgctcgag
      541 gaattcggct tcgcccgcgg gagctacgaa gcgcgccccg acgacgggct taccctgatc
      601 gactgccgca tcaccaatgc ggtgcgctgc gtgccgccgg agaacaagcc gactccggac
      661 gaaatcgcaa cctgccgcag ctatctcgcg gcgaccatca aggaaatgag caggcttcgc
      721 gccattgtcg cactcgggcg cgtcgcccac gacacattca tcgcagcgca ggaggcgcgg
      781 cgcgccgact atcccttctc ccacggctgt gcacagacga tcggcgcgat cacgctgttc
      841 gacagctacc actgctcgcg cttgaacacg aacaccggcg tgctcacgcc gcagatgttc
      901 cgcgacgtgt tcgcgcgcgt gcgccggcac ctcgatgtgg gatgagcttt gccagcccgg
      961 ccgtcgaaag tcgcagctac ccagccgcgc cctcactccg gtgaacgagg ttgcggaggc
     1021 tggaatgcgc aggcgcgaaa tccgccacat tgcgagtaac cacggtaagg ccgtgctcca
     1081 gcgccgttgc cgcaatcatg aggtccgcgc tctcgttgcc cagggccgcg cttagcaagc
     1141 cccagcgtcg cgccgccgat agatcgaagg gcaagatgcg ctcgcgtaga tggccagcac
     1201 cgtgtcgagc caacgagcga gagcggccgc aaagcctggg ttgcttgcac gctgcgcggc
     1261 aattccgcgc tcgatttcac gaatgctaat gacgctgacg aacagatcaa ccgtccgttg
     1321 tcgttcgaac caggcgacca gccgcgtgtc gcgacgccgc ctgcgcaact ccgacagcgt
     1381 gacggtgtcg atcaggtaca tcagaatttg agatcgcgcg gtcgcgcctt caggcgcgcg
     1441 aagctgcctc catcctgcgg tatcgccagc aagagttcgg caaaggaggg ggccttggtt
     1501 cgtccgagat ggcgtaggcg ctcgtactcc ttggcatcga ccacaacgac cgcaggtttg
     1561 ccgtgcttgg taaccatctg cggcgtgcga tgtgccgcct cgacgacctc gctgaaacgg
     1621 tttttggcgt cttgcaaaca cggccgcgtc aacgcggccg cctaaggcct gcgcaccaat
     1681 agcgagggct ccaacgcgcc cgcctcaccg acgctgggtc aggcgtgcgc cgcctcatgg
     1741 aaaatcgcgg cctcgtagtc gccgccgccc atttcgctgc gcgggaagat gccgtgctgc
     1801 tcgatccatt cgaacgactg ctcgaaggtc tccttcgagt agggctcgaa caccagccgc
     1861 tcgcccgggc cccagcggcg cgtatccatc tggtcgtgga agcgcaccgg gaattcccgc
     1921 ctgtagtagt gggtgtaaag ctcgggccgc aagtcgatgt cgcgttgcgc ccggcgcagc
     1981 gcccggaaat atttgcgcac gtcttcggga tcgggcgtgc cggcgatcat cgaggccatc
     2041 atgtaggtga tatcgatgat tttgcggaaa ccgagctgct cggcgaaata gtacggcccg
     2101 ctgaacaatg acgccgccgg cagcttgcgg tcgatcagca tttccatgcg gctgaacagc
     2161 agtccgtcgt tgaacgacag cttgatctcc tcgggcgtga gatattgctc gagcccctgg
     2221 atggtcgcgt agtggcttcc cgactggtag ccgaccgaga tcggcacgcc ggcgagatcg
     2281 gccggcgtcc gcaccggcga atccggcggc acgaagatgc cgcatgggga aaccgaatag
     2341 cactcggcgt agagcttgcc gtagccgttc gaggcggcga cattcatggt ccagtggcag
     2401 gcgccgctga cgttgcaggc gcggccggct tccagcgtct ggtaggcgcg gaccttgttg
     2461 ccgagctgat ggccgctgcc gctggtcgaa tccatggtct cgcggaactc gtagtcgaga
     2521 ccctcggcgg cgaaataccc tttctcctca gcgacccatt cctgcagccg gaaatgcggg
     2581 gcgacgacga attttgtcat gggaatcctc ttggcgtttc ctcttggcgt ttcctctcgg
     2641 ctcggtctgt gggcaccggt acccgctacc tagcgatgct cgcgcaacca cgcaacgacc
     2701 tcggcggcat tctggtccgg cggaaacacc ggatagaacg ccttgccgat gatgccgtcg
     2761 tcgacgacaa gcgccatgcg cttgagcagc gtcatgccgg caacggtgaa cgtggggagc
     2821 ttcatggcgc gggtgaatgc aagcccggca tcggagagga tcgcgaacgg caggtgcagg
     2881 cgctcggcgg cctcgcgctg atagttggtg tcctgcgtcg agagcccgaa caggtgggaa
     2941 acgccgagcc cattgagctc ggcgaagtgg tcgcgaaagc cgcaggattg gggggtgcag
     3001 ccgcgcgcgc cgggaatatc gttccacccc ggcggcagat cgacgccggg cacgccggtg
     3061 cgcggataga g
//
LOCUS       DATMQB010000194         3355 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4090929, whole genome shotgun sequence.
ACCESSION   DATMQB010000194 DATMQB010000000
VERSION     DATMQB010000194.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3355)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3355)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3355
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4090929"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1397
                     /gene="ahcY"
                     /locus_tag="VNY79_05950"
     CDS             <1..1397
                     /gene="ahcY"
                     /locus_tag="VNY79_05950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004013 - adenosylhomocysteinase activity
                     [Evidence IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="adenosylhomocysteinase"
                     /protein_id="HWX72022.1"
                     /translation="DHADYVVKDLSLAEWGRKEIAIAETEMPGLMATREEYGPEQPLR
                     GSRIAGSLHMTIQTAVLIETLTALGADVRWASCNIYSTQDHAAAAVAAAGTPVFAVKG
                     ESMPDYWEYTHRIFEWSDGGSPNMILDDGGDATLLMHLGSQAESNPAVLNHPTNEEEE
                     VLFAAIKKRLAQSPGWYSKTANAIRGVTEETTTGVHRLYQMQKEGRLLFPAINVNDSV
                     TKSKFDNLYGCRESLVDGIRRGTDVMMAGKVAMVAGFGDVGKGSAASLRQAGCRVMVS
                     EIDPICALQAAMEGYEVTTMEDAAPHADIFVTATGNVDVITIEHMRKMKHRAIVCNIG
                     HFDSEIQVASLRNLKWHNVKPQVDEIEFADGKRIILLSEGRLVNLGNAMGHPSFVMSS
                     SFTNQTLAQIELWTHPGRYEKKVYTLPKQLDEKVARLHLDKIGVKLTKLSDKQSTYIG
                     IPLNGPFKTDHYRY"
     gene            complement(1405..2949)
                     /locus_tag="VNY79_05955"
     CDS             complement(1405..2949)
                     /locus_tag="VNY79_05955"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HWX72023.1"
                     /translation="MSAARRHPPDRAKPGSAPFAERLVLAGRRLVTEKHEGVIVAGAL
                     GCFAALWMVYDTITLAPVDLRWDASEASLWAQHFAFGYKHPPMTGWLFALWFAVFPRA
                     DWAEHLLYLTMAVTTLAVAWRLLRDHLDKERALFGLAALFLVPLYTVKTAELNANTVM
                     MPFWAAALLFYLRARRGLGVADAFLAGAFASLAVLGKYWAVFLLTGMAVASVVGAGTK
                     RFWRSPAPYVMAAGAAIVLAPHAIWLVIERGGASYAFVRSNVMAAESFGAALAGSAYY
                     LVGVTGYAIGPLLFLAALRPSRAALADIVWPADDDRQQAVLLFAVPLVLPALVNLVLP
                     YRLTPDWTFPNWPLLPVVLYASLALVISTTTVAASGLIALALSLAALVAAPFIAYQKL
                     RAGADPNRPSSHHVVEVAEQLTAQPPLLFWGSPELTGGLPFYLPNAQALEVSPLSPEG
                     HAAIDVSGLLVACLKEDAPCEATAAALAGGASRSADVTYARSFLGLAGPPSLYRVTVV
                     PRRPGK"
     gene            3074..>3355
                     /locus_tag="VNY79_05960"
     CDS             3074..>3355
                     /locus_tag="VNY79_05960"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007602465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HWX72024.1"
                     /translation="MERGDLSQPTINGGSPASPAAALPRPDKGAVVRPAPELTIVVPT
                     FNEEANIPILVARLSRVLAGHDWEVIFVDDNSPDGSAATARSIGEADSRV"
BASE COUNT          678 a         1110 c         1106 g          461 t
ORIGIN      
        1 ccgatcacgc cgattatgtc gtcaaggacc tcagcctcgc cgaatggggc cgcaaggaaa
       61 tcgccattgc cgagaccgag atgccgggcc tcatggcgac gcgcgaggaa tacggcccgg
      121 agcagccgct gcgcggctcc cgcatcgccg gctcgctgca catgaccatc cagaccgccg
      181 tgctgatcga gacgctcacg gccctgggcg ccgacgtgcg ctgggcatcc tgcaacatct
      241 actcgacgca ggaccacgcc gccgcggcgg tcgccgccgc cggcaccccg gtgttcgcgg
      301 tcaagggcga gtcgatgccc gactactggg aatacaccca ccgcatcttc gaatggtccg
      361 acggcggcag cccgaacatg atcctcgatg acggcggcga cgccacgctg ctcatgcatc
      421 tcgggtcgca ggcggaatcc aatccggccg tgctcaacca tccgaccaac gaggaagagg
      481 aggtgctgtt cgccgccatc aaaaagcggc tcgcgcagtc acccggctgg tacagcaaga
      541 ccgccaacgc cattcgcggc gtgaccgagg aaacgaccac cggcgtgcac cgcctctatc
      601 agatgcagaa ggaaggccgg ctcctgttcc cggcgatcaa cgtcaacgac agcgtcacca
      661 agtcgaagtt cgacaatctc tacggctgcc gtgaatcgct ggtcgacggc atccgccgcg
      721 gcactgacgt gatgatggcc ggcaaggtgg cgatggtcgc cggcttcggc gacgtcggca
      781 agggctcggc ggcctcgctg cgccaggccg gctgccgggt catggtctcg gagatcgatc
      841 cgatctgcgc gctgcaggcg gcgatggagg gctacgaagt cacgaccatg gaggacgccg
      901 ccccccatgc cgacatcttc gtcaccgcca ccggcaacgt cgacgtcatc accatcgagc
      961 acatgcgcaa gatgaagcac cgcgccattg tgtgcaacat cggccatttc gacagcgaga
     1021 tccaggtggc gtcgctgcgc aatctcaaat ggcacaatgt caagccgcag gtggacgaga
     1081 tcgagttcgc cgacggcaag cgcatcatcc ttctgtccga gggacggctg gtcaatctcg
     1141 gcaacgccat gggccacccg agcttcgtga tgtcgtcatc gttcaccaac cagacgctgg
     1201 cgcagatcga gctgtggacg caccccggaa gatacgagaa gaaggtgtac acgctgccga
     1261 agcagctcga cgagaaggtc gcgcggcttc atctcgataa gatcggcgtc aagctgacaa
     1321 agctttccga caagcagtcg acctatatcg gcatcccgct caacggcccg ttcaagaccg
     1381 atcactaccg gtattgagcc tggctcattt gccgggccgc cgcggaacca cggtgacccg
     1441 ataaaggctt ggcgggccgg ccaatccgag gaacgagcgg gcgtaggtca cgtccgccga
     1501 gcggctcgcg ccgcctgcga gcgcggccgc ggtcgcctcg cacggcgcgt cctccttgag
     1561 gcaggcaacg aggaggccgc tgacgtcaat ggcggcgtgg ccctccggcg acagcgggct
     1621 cacctccagc gcctgcgcgt ttggcagata gaacggcagg ccgccggtca gttctggcga
     1681 accccagaac agcagcggcg gctgggccgt aagctgctcg gccacttcga ccacgtgatg
     1741 cgaactcggc cggttcgggt cggcgcccgc tcgcagtttt tggtaggcga tgaaaggcgc
     1801 ggcgacgagc gcggcgagac tcagcgccag cgcgatgagg cccgaagcgg caacggtcgt
     1861 cgtacttatg acgagggcaa gcgaagcgta aaggacgaca ggcaagagcg gccagttggg
     1921 aaacgtccaa tcgggcgtga gccggtatgg caggaccaga ttcaccagtg ccggcagaac
     1981 gagcggcacg gcgaacaaca agacagcctg ctggcggtcg tcatcggccg gccagacgat
     2041 gtcggcgagg gcggccctgc tcgggcgaag cgccgcgagg aagaggagcg gtccgatcgc
     2101 gtaccccgtg acgcccacca gatagtacgc cgacccggcg agtgccgcgc caaacgactc
     2161 ggcggccatc acgttcgagc gcacaaaggc atagctcgcg ccaccgcgct cgatgactag
     2221 ccagatggcg tgaggcgcca ggacaatggc cgcgccggcc gccatcacat acggggcggg
     2281 cgaacgccag aaacgtttcg tcccggcgcc gacgacggag gccaccgcca tgccggtgag
     2341 gagaaacacc gcccagtatt tgccgagcac ggcaaggctt gcgaacgctc cggcaagaaa
     2401 ggcatcggcg acgccgagtc cgcgacgggc ccgcaggtag aacagcagcg ccgccgccca
     2461 gaacggcatc atcaccgtgt tagcgttgag ctccgcggtc ttgaccgtat agagcggcac
     2521 gaggaacagc gccgcaaggc cgaacagcgc ccgctccttg tcgagatgat cgcgcagcag
     2581 ccgccaggca acggcaagcg tggtgacggc catcgtgagg tagagcaggt gctcggccca
     2641 atcggcgcgg ggaaagaccg cgaaccacag cgcaaacagc caccccgtca tcggcgggtg
     2701 cttgtagccg aaggcaaaat gctgcgccca cagcgacgcc tcgctggcat cccagcgcag
     2761 gtctaccggc gccagcgtga tggtgtcgta gaccatccac agcgcggcga aacaaccaag
     2821 cgcgccggcg acgatgacgc cctcgtgttt ttccgtgacg aggcgccgtc cggcgaggac
     2881 aaggcgctcc gcgaatggag cggatcctgg ttttgctcgg tcagggggat ggcgccgggc
     2941 cgcggacatc gaatctctcc gaagcagagc ccagccggcc aagccaaaca gagccagaca
     3001 attcccgatc gttttccagg gcttgccaaa gctagtagcc tgcgcctacg cacagagcaa
     3061 caatgcgggt ggcatggagc gcggagactt gtcgcagccg acgataaacg ggggatcgcc
     3121 ggcgagccca gcggccgcgc ttccgcgccc ggacaagggc gccgtggtac ggccggcgcc
     3181 ggaactcacg atcgtcgtgc cgaccttcaa cgaagaagcc aacattccga tcctggtcgc
     3241 gcggctcagc cgcgttctcg ccggccatga ttgggaggtg atattcgtcg acgataattc
     3301 gccggacggg agcgcggcga ccgcgcgctc gatcggcgaa gccgacagcc gcgtg
//
LOCUS       DATMQB010000195        11415 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1613445, whole genome shotgun sequence.
ACCESSION   DATMQB010000195 DATMQB010000000
VERSION     DATMQB010000195.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11415)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11415)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11415
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1613445"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..111
                     /locus_tag="VNY79_05965"
     CDS             <1..111
                     /locus_tag="VNY79_05965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018317102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease"
                     /protein_id="HWX72025.1"
                     /translation="EDAKEAIGHGVRAKRSKSGAVSFDLLDVEARHAALQ"
     gene            95..1387
                     /locus_tag="VNY79_05970"
     CDS             95..1387
                     /locus_tag="VNY79_05970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007606636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ERF family protein"
                     /protein_id="HWX72026.1"
                     /translation="MQRSSETIGAIAAALAKAQAELTNPEKSLVATIRPDGPGEAERS
                     FRYAPLSSGLDIVRKSLGQHEIATVQTTAIDQTAGIINLTTVLAHASGEWIASDWPVC
                     AISETATPHRMGAALTYARRYALFTLVGIAGEDDIDSPDLNTPTAAALEPEKSALNKR
                     DSLNGGQRYSAQQIQGRRGAQANSSKPMLGTEASIALRDQLLTELKEVGSAEEVANWA
                     YRALGAKNSLTAADARQVEAAFQARLTMFGSVADVGEKSLPPDRFALQPSSLPERPAV
                     GSERTTTTDAIDKSELAHPEPRRLRDKEHVKLVAQQPCLICGRKPADAHHLRFTQHRA
                     LGRKVSDEFTVPLCRGHHREVHRCGDEAAWWKNAGVDPTITARSLWLETHPLPTRLDE
                     MGIAGATSLPPINAKRDRSLSKRGRNYKTKPIITTGPQ"
     gene            complement(2642..3064)
                     /gene="arfB"
                     /locus_tag="VNY79_05975"
     CDS             complement(2642..3064)
                     /gene="arfB"
                     /locus_tag="VNY79_05975"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003747 - translation release factor
                     activity [Evidence IEA];
                     GO_process: GO:0006415 - translational termination
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alternative ribosome rescue aminoacyl-tRNA
                     hydrolase ArfB"
                     /protein_id="HWX72027.1"
                     /translation="MIRVTDQINIDEREIEESFVRASGPGGQNVNKLATAVQLRFDVR
                     GSPSLPAEVRARLEKLAGARMTREGVLVIAAQRHRTQARNRQDALERLVDLVRRAAIE
                     PRARRPTRPTAAARERRIEVKKRRAGIKRLRHGKLAFD"
     gene            complement(3176..3709)
                     /locus_tag="VNY79_05980"
     CDS             complement(3176..3709)
                     /locus_tag="VNY79_05980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HWX72028.1"
                     /translation="MKVSASIALAAAAAAVLAAATLLPRAHAESQIDRGKYLVTLGGC
                     NDCHTPGYFFGKPDMARYLGGSEVAFEIPGVGAFPGRNITPDKETGIGNWTTEQIVTA
                     LQQGKRPDGRMLAPIMPYHAFSYLTKEDAFAIAAFLQSIPPVKNEVAGLFKPGDQITI
                     FTFRILPPGDTAAAAPK"
     gene            complement(3872..4738)
                     /locus_tag="VNY79_05985"
     CDS             complement(3872..4738)
                     /locus_tag="VNY79_05985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NlpC/P60 family protein"
                     /protein_id="HWX72029.1"
                     /translation="MPAYDPRLTPARADLAAKALAGKVDAKRYVEGHVREIVEPQAPL
                     RREPAPDAPLATEALKGERVTIYDENAEGWAWGQLAADGYVGWLPANALAPPGAAVTH
                     KVSALRTLVFPGPSIKLSPVEALPLGARLAIARIEGSLAVTPTGGHVPAAHLAPIDVY
                     ETDFVAVAERFLGAPYLWGGKTTLGLDCSGLVQIALTACGIACPRDSDMQEQALGTRL
                     SLNLDGPAPRRGDLVFWSGHVAIVRDRSSLLHANAFHMSVVIEPIAEAVSRIRDSGSE
                     ISSVRRIEAPID"
     gene            complement(4749..6128)
                     /locus_tag="VNY79_05990"
     CDS             complement(4749..6128)
                     /locus_tag="VNY79_05990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucyl aminopeptidase family protein"
                     /protein_id="HWX72030.1"
                     /translation="MDSIFTVGRSADAVPIWFVTGKTYAELRERLDEGARTFADAAGF
                     EPKAGRHLLLPARSGLGGVLFGLDDPDEARNDPFLPGRLPQILPDGAYRFANEAPDPR
                     LAALAFALGSYRFTRYRKPDERELKLDLPQSLDRDELVRIVEAVTLARDLINTPANDM
                     GPQEVEMAAGALAARHGAKMSAVVGENLLAENFPLIHAVGRASVAAPRLIELQWGEAD
                     HPRVTLVGKGVCFDSGGLDIKPESAMLLMKKDMGGAASVLALAHMIMDRKLKVRLSVL
                     IPAVENAISGAAFRPRDVYRSRKGLTVEVGNTDAEGRLVLADALALADEGAPEILIDM
                     GTLTGAARVALGPDMPPFYTADDALAAAVANHAAAENDPLWRLPLWQPYDTLLESKVA
                     DLNNVGTGSFAGSIVCALFLKRFVEAAKAWLHVDIYAWTPTAKPGRPEGGECQAARAL
                     YALLAARYG"
     gene            complement(6199..7707)
                     /locus_tag="VNY79_05995"
     CDS             complement(6199..7707)
                     /locus_tag="VNY79_05995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HWX72031.1"
                     /translation="MAKIWTRKSIAALEAEAAEPEVQALTTHDGVPLKRTLSAVNLVS
                     LGIGAIIGAGIFVLTGHAAAVNAGPAITLSFVLGAFACAFAGLCYAEMASTVPIAGSA
                     YTYAYATLGEFIAWIIGWDLILEYALGATTVAIGWSGYVVSFLKGFGIVMPPAFAVAP
                     FAYDAGDRVWHATGAIINLPAMVVVVGISALLVVGVRESARVNNFIVAIKLAIVVLFI
                     AVVASHVSTENWVTAGNPSGSFIPPNIGPGQFGIGGVVRGAAVVFFAYIGFDAVSTAA
                     QEAKNPKRDMPIGILGSLVICTVLYVAVGFVLTGIVAYDKLNVSDPIAVGIDAVGLSF
                     LSPIIKFGIVLGLTSVILVMLLGQSRVFYSMARDGLLPPVAARVHPRFRTPYVTTIVT
                     GTVVMILAALLPIGLVGELVSIGTLFAFAIVCLGVLILRIREPGLPRAFRTPAVYVVA
                     PLGAASSLFLMFGLPLDTWLRFGIWLVIGLVIYAVYGVRHALAAHQPNASRA"
     gene            complement(7892..9256)
                     /locus_tag="VNY79_06000"
     CDS             complement(7892..9256)
                     /locus_tag="VNY79_06000"
                     /EC_number="2.7.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AarF/ABC1/UbiB kinase family protein"
                     /protein_id="HWX72032.1"
                     /translation="MANREETDREKNRFSARAARYARVGAGVGGVAARFAGARLLGSG
                     PNRAGEASALAAALGSLKGPLMKVAQLMATIPDLLPPEYAAELQKLQSEAPPMGWAFV
                     KRRMNAELGPDWEKKFQNFEHRPAAAASLGQVHRARALSGEALACKLQYPDMQSAVEA
                     DLQQLEWVLAIRRRLDTAIDTTEIGKEIGARVREELDYRREARHVALYRTMLDGIDNV
                     RVPRAWPELSSGRLLTLDWLEGSRMLAHKDDPLAARNALATAMFTAWWFPFSRFGVIH
                     GDPHLGNYTVFEQGGEPAGINLLDYGCVRIFPPKFVRGVVDLYHGLLHGDDELIVRAY
                     ETWGFRRLSRDLIDTLNIWARFIYAPLLDDRVRTIADGVAPAEYGRREAFRVHRALKQ
                     KGPVTVPREFVFMDRAAIGLGAVFLHLRAELNFYRLFNEAIEHFSLERVAKRQAGALA
                     AAGL"
     gene            complement(9256..9645)
                     /locus_tag="VNY79_06005"
     CDS             complement(9256..9645)
                     /locus_tag="VNY79_06005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016301 - kinase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system death-on-curing
                     family toxin"
                     /protein_id="HWX72033.1"
                     /translation="MGKEPIWLIYDQVIAIHSRQLRRFGGAPGLRDEGLLRSAIERPL
                     NKWHYEGTELPELAAANAFGLAKNQAFVDGNKRIAFMSMMTFLRKNSVRFLPDPAHAT
                     RIIISLAAGEVSEESLARWIRDNWPKA"
     gene            complement(9658..9882)
                     /locus_tag="VNY79_06010"
     CDS             complement(9658..9882)
                     /locus_tag="VNY79_06010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB family transcriptional regulator"
                     /protein_id="HWX72034.1"
                     /translation="MKLEVKRIGNSDGFILPRELMQRLDIKRGQSFHVVELAGGGLQL
                     LPYDPDFAATMEAAEEIMDEYRDTLVALAK"
     gene            complement(10290..>11415)
                     /locus_tag="VNY79_06015"
     CDS             complement(10290..>11415)
                     /locus_tag="VNY79_06015"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HWX72035.1"
                     /translation="DNVQQFALITNTLAKDKEISDRWRGFADIADDRHLSNRVEREVV
                     DALVAAVRAAYPRLSHRYYALKARWFGKKSLPHWDRNAPLPQVPARTIAWDEAMETVL
                     TAYGAFSPRMAAIAERFFAERWIDAPVRLGKTPGAFAHPTVPSAHPYVLINYQGKPRD
                     VMTLAHELGHGVHQVLAAPNGALMAPTPLTLAETASVFGEMLTFRKLLAATTDRKQRK
                     AMLAAKVEDMINTVVRQIAFYTFERALHTERKSGELTADRLGELWLEVQRESLGPAID
                     LKPGYETFWAYIPHFVHSPFYVYAYAFGDCLVNSLYAVYERADEGFAERYLAMLSAGG
                     TKHYSELLAPFGLDARDPAFWQGGIGIIERLIGELEALQG"
BASE COUNT         2099 a         3608 c         3744 g         1964 t
ORIGIN      
        1 gaagatgcca aggaagcgat cggccacgga gttcgcgcca agcgctcgaa atcgggcgcg
       61 gtcagcttcg atctcctcga cgtggaggcc aggcatgcag cgctccagtg aaacgattgg
      121 ggcgatcgcc gctgcgctgg ccaaagcgca ggcggaactg accaatccgg agaaatctct
      181 ggtggcgacg atccggccgg atggccctgg cgaggccgaa cggtcgttcc gctatgcccc
      241 gttgtcgagc gggctcgaca ttgtgcgcaa gagcttaggc cagcatgaga ttgcgacggt
      301 gcagaccact gcgatcgacc agaccgccgg catcatcaat ctcacgacag tgctggcgca
      361 tgcctcgggg gaatggattg cgtcggactg gccggtctgc gccatcagcg agaccgcgac
      421 gccgcaccgg atgggagcag cactgaccta tgcccgccgt tacgccctat tcacgttggt
      481 tggcattgcc ggggaggacg atatcgactc tcccgatctc aacacaccga cggccgcggc
      541 attggaaccc gagaagtcgg cgttgaataa gcgcgacagc ctgaacggcg gccaacgtta
      601 ttctgctcaa caaatccaag gacgtcgcgg cgcacaagct aattcctcca agccaatgct
      661 tgggaccgag gcatcgatcg cattgcgtga tcaactcctg accgaactga aggaagttgg
      721 ctcggctgag gaggtcgcaa attgggcgta ccgggctctc ggcgccaaaa acagtttaac
      781 cgcagccgac gcccggcagg tcgaggccgc gttccaggct aggcttacca tgtttggaag
      841 cgttgcagac gtcggcgaaa aatccttgcc accggatagg ttcgcgctgc agccctcttc
      901 attacccgag cggccggccg tggggtcgga gaggacaacc accactgacg ccatagacaa
      961 gagtgagttg gcgcatcccg agccgcgccg ccttcgtgac aaggagcacg tcaagctggt
     1021 ggcgcaacag ccctgtctca tctgcggccg caagcctgca gatgctcacc atctgcggtt
     1081 cacgcagcac cgcgcactag gccgcaaggt cagcgatgag ttcacggtgc cactgtgccg
     1141 aggtcatcat cgtgaggtcc atcgctgtgg cgatgaagcc gcatggtgga aaaatgctgg
     1201 cgttgacccg accatcactg cccggagcct gtggttggag acgcatccgc tgccgacgcg
     1261 tctggatgaa atgggcatcg ctggcgcgac ttctctacct cctataaacg ctaagcgtga
     1321 tcggtcgctc agcaaacgag ggcggaatta caaaacgaag ccaattatca cgactgggcc
     1381 ccaatgactt ccttcagaca gattgatgcc aaccgtcgca atgctcgcaa aagcaccggt
     1441 ccgagtacag aagaaggcaa acggcgctcg cgctgcaacg ccatccgtca tggtctcacg
     1501 gcggagacgg tgatcggcgc gctggaggat gctgaagatt acaaagcatt cgaagcagcg
     1561 atcattgcgg attacgatgc tcaatccgca gtggagcgtg agttggtgct gcgattagcg
     1621 agtttgttgt ggaggctgcg ccgcgccacg acgatggaaa ccgccctatt ccaaattcag
     1681 gctgagcatc tgagtgggtt caagcaggcc gttcaccctg cttctcgaga ggttgtctat
     1741 gcgctgttcg ggagggctga ctcggtcagt ttcgaccgcg atccgcgatc gcacggtgtc
     1801 aaaatggaac agaagccgtg cccagctccg tgccggaatc tgtcggatct gccgttgatc
     1861 cgaccgctga gctcgcgcgt tgcttcttgc gtctcgccaa tctgcccaac tacgccctcg
     1921 atcgcctcag ccggtacgaa gcaacgcttt ggcgccaagc cggacagatc ctgtttgcac
     1981 tggacgcctt ggatcgccgc agaccacacg atagaaggca ccggtaccgt gtcggcagtc
     2041 ggcaagatct ggtctacgag cacgaggaat gataactttc gaggtcgccg atcgagggat
     2101 tgctcggcga gacggggctc accttgccgc ctgagagcaa caaactcatg tatagggtgt
     2161 attagacgac ttcttgaatc caattttgat gatcgctccg ggcgccggtg ttggcaaatg
     2221 agggtgatca ctgacgctta cttcacagtt tcacggtctt gcgtgaaact ggacagcact
     2281 tatcctgagc ttcctgtttt ggcgcgctga cattcgctta tgccgcaaga atatttgttc
     2341 gtattaccta ttataaccaa tatcatcttt gtcatgatgc actgatctaa tggcattggc
     2401 ggtcgccgcg ccgagagcag aaatgctatc tcctcctcgg cgggaccggc gcttgtagcg
     2461 gggccctacc aagagggcaa acgcttggcg catccgagga aggcaaattt gatcctcggt
     2521 gcaggtcgag actgatcaga gcaaagatga gggttttttc tggattggtc gtggtcggga
     2581 aaatgataat cgacggctcc gtctccgatg ggccgccgcg ccaccattga gacgcgttag
     2641 actaatcgaa cgccagtttg ccgtggcgca gccgcttgat gccagcgcgg cgtttcttga
     2701 cttcgatgcg gcgctcgcgg gcggcggcag tgggcctggt gggacgtcgc gcgcgcggct
     2761 caatggccgc ccggcggacg aggtcgacga ggcgttcgag ggcatcctgg cgattgcgcg
     2821 cctgcgtccg gtgacgttgc gcggcgatga cgagcacgcc ttcgcgggtc atgcgcgctc
     2881 cggcgagctt ctcaagacgc gcccgcacct cggccggcag cgaaggcgat ccgcgcacgt
     2941 cgaagcgaag ctgaaccgcg gtcgcgagct tgttgacgtt ctgcccgcca ggaccggagg
     3001 cccgtacgaa gctttcttcg atctcgcgct cgtcgatgtt gatttggtcg gtgacccgga
     3061 tcacggcgcg tcactcggct tcggtgcgcg tagcgccgct gcaactcctc gcgaatcgtg
     3121 tcgcgagggc gcgacataag ccgcgcgcgt catgcttccg gccaggccag cggtactatt
     3181 tcggggctgc agcggccgtg tctcccggcg gcaaaatcct gaacgtgaag atcgtgatct
     3241 ggtcgcccgg cttgaataga ccggcaacct cattcttgac cggcgggatg ctctgaagaa
     3301 aggcggcgat ggcgaacgcg tcttccttcg tcaggtagga gaacgcgtgg tagggcatga
     3361 tcggcgccag catgcggccg tcgggccgct tgccctgctg caaggcggtc acgatctgct
     3421 cggtggtcca gttgccgatc ccggtctcct tgtccggcgt gatgtttctt ccgggaaacg
     3481 cgccgacacc gggaatttcg aacgccacct ccgatccgcc gagatagcgt gccatgtccg
     3541 gcttgccgaa aaagtagccc ggcgtatggc aatcgttgca gccgccgagc gtgaccaggt
     3601 acttgccgcg gtcgatctgc gactcggcgt gcgcgcgcgg cagcaaagta gccgccgcga
     3661 ggaccgcggc tgcggcggct gcgagtgcga tactggcgga aactttcatg gcgatcctct
     3721 tgcgtttgtc gatggccgca ggcgcacgcg gcttatatcg ctgcgattcg tgctgcgtgg
     3781 cataggcatc gtagcctgga tcgccgaccg cgggaaacac gaacgctgcg tgcacgacgc
     3841 gggtcgctgc ccactcgttc gcccgcgacg atcagtcgat cggggcctcg atcctccgca
     3901 cgctcgagat ttcgctgccg ctgtcgcgga tgcgcgagac cgcctcggca atcggctcga
     3961 tgacgaccga catgtggaag gcgttggcgt gcaggaggct cgagcggtcg cgcacgatgg
     4021 cgacatggcc gctccagaac accaggtcgc cgcgccgcgg ggcggggcca tcgaggttga
     4081 gggagagccg ggtccccagc gcctgttcct gcatgtcgct gtcgcgcgga caggcaatgc
     4141 cgcaggctgt aagcgcgatc tgcaccaaac ccgagcagtc gagcccgagc gtcgtcttgc
     4201 cgccccacag atacggagcg ccgaggaatc gctcggcgac ggcgacgaaa tccgtttcgt
     4261 agacgtcaat aggcgcgagg tgcgcggccg gcacatggcc acccgttggc gtgaccgcca
     4321 aggacccttc gatgcgcgca atcgccagcc gcgccccgag cggcagcgct tcgaccggcg
     4381 aaagcttgat cgaggggccg ggaaacacca aggtccgcaa cgccgagacc ttgtgcgtca
     4441 ccgccgcgcc agggggcgca agcgcgttcg cggggagcca cccgacgtag ccgtcggcgg
     4501 cgagctggcc ccaggcccag ccctccgcat tctcgtcgta gatggtgaca cgctcgccct
     4561 tgagcgcctc agtcgcgagc ggcgcatcgg gcgccggctc gcgccgcagc ggcgcctgcg
     4621 gctcgacgat ttcgcgaacg tgcccctcga cgtagcgctt cgcgtcgact tttcccgcca
     4681 acgccttcgc cgcgagatcg gcgcgggccg gcgtgagccg cgggtcgtat gcgggcatgg
     4741 atttcggttc agccgtagcg cgcggcgagg agtgcgtaga gagcgcgcgc ggcctggcat
     4801 tcgccgccct cgggccggcc gggcttggcg gtcggggtcc aggcgtagat gtcgacgtgc
     4861 agccacgcct tcgccgcttc gacgaagcgc ttgaggaaca gcgcgcagac gatcgagccg
     4921 gcgaagctgc cggtgccgac gttgttcaga tccgccactt tcgattcgag cagcgtgtcg
     4981 tagggctgcc acagcggcag ccgccagagc ggatcgttct ccgccgcggc atggttcgcg
     5041 accgcggcgg cgagcgcatc gtccgcggta tagaatggcg gcatatccgg accgagcgcg
     5101 acgcgcgcgg cgcccgtcag cgtgcccatg tcgatcaaga tctcaggcgc gccctcgtcg
     5161 gcgagcgcga gcgcgtcggc caggacgagc cgcccttcgg cgtcggtgtt gccgacctcg
     5221 accgtgagcc ccttgcgcga ccggtacacg tcgcgcgggc ggaaagcggc gccggaaatc
     5281 gcgttctcga ccgccgggat gagcacgctg agccgcacct tgagcttgcg gtccatgatc
     5341 atgtgcgcga gcgccagcac gctcgccgcc ccgcccatgt ccttcttcat cagcaacatc
     5401 gcgctctcgg gcttgatgtc gagaccgccc gaatcgaagc agacgccctt ccccaccaac
     5461 gtcacgcgcg gatgatcggc ttcgccccat tgcagctcga tgagccgcgg cgccgccacc
     5521 gacgcgcggc cgacggcgtg gatcagcgga aaattttcgg ccagcaaatt ctcgccgacg
     5581 accgcgctca tcttcgcgcc gtggcgtgca gcgagcgcgc cggccgccat ttcgacctcc
     5641 tgcgggccca tgtcgttggc cggcgtgttg atgagatcgc gcgcgagagt caccgcttcg
     5701 acgatgcgca cgagttcgtc gcgatcgagg ctttgcggca gatcgagctt gagctcgcgt
     5761 tcgtcgggct tgcggtagcg ggtgaagcgg taggacccaa gcgcgaaagc gagcgcagca
     5821 agccgcgggt cgggcgcctc gttggcgaac cggtaggcgc cgtccggcaa gatttgcggc
     5881 aggcggccgg gaaggaacgg gtcgttgcgc gcttcatccg ggtcatcgag cccgaacagg
     5941 actccgccaa ggccgctccg cgccggcagc agcaggtggc gtccggcctt gggttcgaaa
     6001 cctgccgcat cggcgaaggt gcgcgccccc tcatcgagcc gctcgcgcag ctcggcgtag
     6061 gtctttccag tgacgaacca gatcggcacc gcatctgcgc tgcggccgac cgtgaagatt
     6121 gagtccatgc gcagggtccg ggcgcaagaa ggatgggtcc tgctatcacg ccgctcgcaa
     6181 gccggaaagg cggcggagct acgcgcgcga agcgttcggc tgatgcgcgg cgagcgcgtg
     6241 gcgaacgccg tagacggcat agatcaccag cccgatcaca agccagatgc caaaacgcag
     6301 ccaggtatcg agcggcaggc cgaacatcag gaacagcgag gacgccgcgc ccaagggggc
     6361 gacgacgtag accgccggcg tccgaaacgc gcgcggcagg ccgggctccc tgatgcgcag
     6421 gatgagcacg ccgaggcaga cgatggcgaa ggcaaacagg gtgccgatgc tgaccagttc
     6481 gccgacgagg ccgatcggca ggagcgcggc gaggatcatc accacggtgc cggtcacgat
     6541 cgtggtcacg tacggcgtgc gaaatcgcgg gtgcacccgg gcggcgaccg gcggcagcag
     6601 accgtcacgc gccatcgaat agaagacgcg cgactgcccg agcagcatga ccaggatgac
     6661 agaggtcagg ccgagaacaa tgccgaattt gatgatcggc gacagaaagc tgagcccgac
     6721 cgcatcgatg cccaccgcaa tcggatccga cacgttgagc ttgtcatagg ccacgatccc
     6781 agtgagcacg aagccgacgg ccacgtagag cacggtgcag atcacgagcg aaccgagaat
     6841 cccgatcggc atgtcgcgct tcgggttctt cgcttcctgc gccgctgtcg aaaccgcatc
     6901 gaagccgata taggcgaaga acacgacagc ggcgccgcgc accacaccgc cgatgccgaa
     6961 ttgtccggga ccgatattcg gcggaatgaa gctgccggaa ggattgcccg ccgtcaccca
     7021 attttcggtg ctgacgtgag acgcgaccac cgcgatgaac agcacgacga ttgcgagctt
     7081 gatcgcgaca atgaaattgt tgacccgcgc cgattcacgc acaccgacga cgagcagcgc
     7141 ggagatgccg acgaccacca ccatcgccgg caggttgatg atcgcgccgg tggcgtgcca
     7201 gacgcggtcg ccggcatcgt aggcgaacgg ggcgacggcg aaggccggcg gcatcacgat
     7261 gccgaaaccc ttgaggaagc tcaccacata gccggaccag ccgatcgcca ccgtggtggc
     7321 gccgagcgcg tattcgagga tcagatccca gccgatgatc caggcgatga actcgcccaa
     7381 cgtggcatag gcataggtgt aggcgctgcc ggcgatcggc acggtggaag ccatttccgc
     7441 gtagcacagg ccagcgaaag cgcaggcaaa ggcgcccagc acaaacgaca aggtgatcgc
     7501 cggaccggca ttcacggcgg cggcatgccc tgtgagcacg aagatgccgg cgccgatgat
     7561 cgcgccgatg ccgagcgaga cgaggttgac ggcggagagg gtgcgcttga gcggcacgcc
     7621 gtcgtgggtg gtcagcgcct gcacctccgg ctcggcagct tcggcctcga gcgccgcaat
     7681 tgatttacgc gtccaaatct tcgccatggc gccttccgtc acataaatga tcaattgcga
     7741 ttccgctcgt tcgcgcagcg ggacctggtt catctttcgc acgcggcgtc tattcctgcg
     7801 gtcgcggcaa cgagcgggga atattcgacc ggcctgtcaa cgattcgccg ccgttcagag
     7861 tttcagctca tttcgcttga caccccacga cctacagccc cgccgccgcg agcgcgcccg
     7921 cctgcctctt ggcgacgcgc tccagcgaaa aatgctcgat cgcctcgttg aacaggcgat
     7981 agaaattaag ttcggcgcgc agatgcaaga acacggcgcc gagcccgatc gcggcgcggt
     8041 ccatgaacac gaactcgcgg ggcaccgtga ccggcccctt ctgcttcaac gcgcggtgca
     8101 cccggaaggc ctcccggcgc ccgtattccg cgggcgcgac cccgtcggct atggtgcgca
     8161 cccggtcatc gagcagcggc gcgtagatga accgcgccca gatgttgagc gtgtcgatga
     8221 gatcgcgcga gagccggcgg aagccccagg tctcgtacgc gcgcacgatg agctcgtcgt
     8281 cgccgtggag gaggccgtga tagaggtcga cgacgccgcg cacgaacttc ggcggaaaga
     8341 tgcggacgca gccatagtcg agcaggttga tccccgccgg ctcgccgccc tgctcgaaca
     8401 ccgtgtagtt gccgaggtgc ggatcgccgt ggatcacccc gaagcggctg aagggaaacc
     8461 accaggccgt gaacatcgcg gtcgcgagcg cgttgcgcgc cgcgagcgga tcgtccttgt
     8521 gcgcgagcat acggctgccc tcgagccagt cgagcgtgag cagccgaccg ctcgacagct
     8581 cgggccaggc gcgcggcacg cgcacgttgt cgatgccgtc gagcatcgtg cggtagagtg
     8641 cgacatgcct cgcctcacgc cggtagtcga gctcttcgcg cacgcgcgcg ccgatctcct
     8701 tgccgatctc ggtggtgtcg attgccgtgt cgaggcggcg gcggatggcg agcacccatt
     8761 cgagctgctg caggtcggcc tcgactgccg actgcatgtc cggatactga agcttgcagg
     8821 cgagcgcctc cccgctcaag gcgcgggcac gatgcacctg gccgagcgaa gcagccgcgg
     8881 cggggcggtg ctcaaagttt tggaatttct tttcccaatc ggggccaagc tccgcgttca
     8941 tgcgacgctt gacgaaggcc cagcccatgg gcggggcttc gctctgcagc ttctgcaatt
     9001 cggcggcgta ttccggcggc agcagatccg gaatggtcgc catgagctgg gcgaccttca
     9061 tcagcggccc tttgagactg ccgagggcag cggcgagcgc cgacgcctcg ccggcgcggt
     9121 tcggaccgga gccgagaagc cgggcgccgg caaagcgcgc cgccacgccg ccgactccag
     9181 cgccgactcg cgcatagcgc gcggcgcggg cggagaagcg gttcttttcg cggtccgtct
     9241 cttcccgatt tgccatcacg ctttcggcca attgtcacga atccaacggg cgaggctctc
     9301 ttcgctcact tcaccggcag caagcgatat gatgatcctg gtggcgtgag ccggatcggg
     9361 caaaaatcta acgctgttct tgcgcaagaa agtcatcatg ctcatgaacg caatgcgttt
     9421 gttaccatcg acgaaggctt ggttcttcgc caagccgaag gcgtttgcag cggcgagctc
     9481 gggcaattct gttccctcgt agtgccattt gttcagtgga cgctcgatag cggagcgcag
     9541 cagcccctcg tcgcgcaagc ctggggctcc cccaaaccgg cgtagttggc ggctatgaat
     9601 cgcaatgacc tggtcgtaga tcagccaaat cggctctttc cccatacgcg gctgcgatca
     9661 cttagccagt gccaccaggg tatcgcgata ttcgtccatg atctcctcgg ccgcttccat
     9721 tgtcgccgca aagtcggggt cgtacggaag gagttgaagc ccgccgccgg cgagttcgac
     9781 gacatggaag gattgccctc gtttgatatc aaggcgctgc atgagttcgc ggggcagaat
     9841 gaacccgtcg gaattgccaa tgcgcttgac ttcgagcttc atgaacacat ccttttcgat
     9901 gtattacatt tcgtataaca ttgaccgccg caatgttcaa catcggactt ccgctaccgg
     9961 caggtaacaa gtcctttcac accagctgcg tgtaagggcc aatcccgcgc atccacccgg
    10021 ctgaggcact gggatgcggt ttcctgcagc caatcggcga aggtctgctt ctgcccgtgt
    10081 ggcccgccga tctctgcgcg cgggaagggc ctgtcgagca gctcgatttg cggctgcaca
    10141 tccggattct gccgcgggtc gcgatgggcg aacctgtcgc tgcgatcgaa caaccggcaa
    10201 gccgcgtgaa agccgagcgc gcgataggct tggaactgct gctcgcaacg ccgctgcaat
    10261 tgcagattgc ggggacgacc tgcgcagcgc tatccctgca aagcctccaa ttccccgatc
    10321 aatcgctcga tgatgccgat gccgccctgc cagaaagcgg gatcgcgcgc gtcgaggccg
    10381 aagggggcga gcaattcgga atagtgcttg gtgccgccgg ccgagagcat cgcgagatag
    10441 cgttcggcaa agccttcatc ggcgcgctcg tagaccgcgt acagcgaatt caccaggcag
    10501 tcgccgaacg cataggcgta gacgtagaac ggcgagtgca cgaaatgcgg gatgtaggcc
    10561 cagaacgtct cgtagccggg ttttaggtcg atcgccgggc cgaggctttc gcgctgcacc
    10621 tccagccaca gctcgccaag acggtcggcg gtcagttcgc cgctcttgcg ctcggtgtgg
    10681 agggcgcgct cgaacgtgta gaacgcgatc tgccgcacca cggtgttgat catgtcttcg
    10741 accttggccg cgagcatcgc cttgcgctgc ttgcggtcgg tcgtcgcggc caggagcttt
    10801 ctgaaagtca gcatctcgcc gaacacgctc gcggtctcgg cgagggtgag cggcgtcggc
    10861 gccatgagcg cgccgttggg cgcggcgagc acctgatgca cgccgtgccc gagttcgtgc
    10921 gcgagagtca tcacgtcgcg cggcttgccc tgatagttga tgagcacgta agggtgcgcc
    10981 gacggcacgg tcgggtgcgc gaaggcgccc ggcgtcttgc ccagacgcac cggcgcgtcg
    11041 atccagcgct cggcgaagaa acgctccgcg atcgccgcca tccttggcga gaaggcgccg
    11101 taggcggtga gcacggtttc catggcctcg tcccaggcga tggtgcgtgc cggcacctga
    11161 gggagcggcg cgttacgatc ccagtgcggc aggctcttct tgccgaacca tcgtgccttg
    11221 agcgcgtagt agcggtgcga gagccgcgga taggcggcgc gcacggcggc gaccagtgca
    11281 tccaccactt cccgctcgac gcggttcgac aaatggcggt cgtcggcaat gtcggcgaag
    11341 ccgcgccagc ggtcggagat ttccttgtcc ttggcgagcg tattggtgat cagcgcgaac
    11401 tgctgcacat tgtcc
//
LOCUS       DATMQB010000196         6068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3782504, whole genome shotgun sequence.
ACCESSION   DATMQB010000196 DATMQB010000000
VERSION     DATMQB010000196.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6068
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3782504"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..423
                     /locus_tag="VNY79_06020"
     CDS             <1..423
                     /locus_tag="VNY79_06020"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyl transferase"
                     /protein_id="HWX72036.1"
                     /translation="IFEPIINAVWSENIAPKAPLSGPSPEAQAHLIDLPIDFASGQRV
                     TRGGFVEHFRLGEDGRFDETQYQLLSRGGYASRQDSEGAEAGDPWGWHGPGGYTGGGR
                     SYYPSQGWQSPPPARGLFAPWQDNRMRRNSDFWGGRFN"
     gene            447..1562
                     /locus_tag="VNY79_06025"
     CDS             447..1562
                     /locus_tag="VNY79_06025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72037.1"
                     /translation="MWMRRAIVLAGLIGSLSVAGAQDFKIEDVSSARSVPVTQLKPGI
                     IVFSDQEGGAAGDEAAKLVRFEEWARTRPAQRKFLALFPGYVEPIVTKEARAEQKTVA
                     NADAKTDASLGAKGDAKAETGPVLEKLYVYVAQARFVLDRPPSAVDLSRYVTLPFLER
                     IDPAIKHKVIAPADVPALKDPQGTGNENPDRKWCTGRPTSVCIQSTYMLEGKLPLGIM
                     LVNKLRDSVKKVSDHIAFISELSLLPPEAIDQAGLKELTGLDTPVSGVLEQNLFYVNQ
                     ILKFGKFFGVFQSHPSDADKTVVTAFMALAIKASVLDERRGFENVPVLRNLVPAQVLM
                     GKSSFNSGASISAGLPQYARNEIRTIATILARDKAAQ"
     gene            complement(1571..2269)
                     /locus_tag="VNY79_06030"
     CDS             complement(1571..2269)
                     /locus_tag="VNY79_06030"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HWX72038.1"
                     /translation="MHTIAISETARERVRARVGKLHPFDTIEPRRTALLVIDMQNYFV
                     KPGHQGEVPMARRIVPNINRLGGELRRRGGHVVWIRNGTAGTRQSWSNYHDGLMTPER
                     MRRRYEAMEEGQEGFEFWHQNDIRPEDTCLTKTRYSAFIHGSSDVERRLRERDADTVL
                     IAGTATNICCESTARDAMMLNFKTIMVADGLAASSDEEHNASLSALYGQFADVQTVDE
                     VLQSLDRGEKARAA"
     gene            2355..>6068
                     /locus_tag="VNY79_06035"
     CDS             2355..>6068
                     /locus_tag="VNY79_06035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010974950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HWX72039.1"
                     /translation="MEHASRRWEFWIDRGGTFTDVIGRRPDDRLVAHKLLSENPEAYR
                     DAAVAGIRHLLGLGPGEPIPADRLGAVKMGTTVATNALLERKGERTLLVITRGFRDAL
                     RIGYQARPKIFARHIVKPDMLYERVVEVDERVRADGTVERELDLDAARSALVQARHDG
                     IDAVAVVFMHAYRHSDHERRVAALARDLGFPQVSASHEVSPLIKLVGRGDTTVVDSYL
                     SPILRRYVAQIAEELVPSPLVGEGMAGGPEARRRSSTLAQDLPTPTPDPSPQGEGENH
                     PRLMFMMSSGGLTAAELFRGKDAILSGPAAGVVGMAETGREAGFARLIGFDMGGTSTD
                     VSHFAGAYERAFETEVAGVRMRAPMMLIHTVAAGGGSILHFDGARFRVGPDSAGANPG
                     PKCYRRGGPLAVTDANVMVGKLIPDFFPKIFGPRQEEPLDADAVREGFAALAERIGDG
                     RTGEEVADGFIRIAVENMANAIKKISVQRGYDVTRYALNCFGGAGGQHACLVADALGM
                     TSVLIHPFSSLLSAYGMGLADIRSVRQQAIEKPFDENARATVAGVAGALGRAVIAEVA
                     GQGVAVEKIKAHVRAHIRYAGTDTALIVEAGTCSFPSPLVGEGRAGGRKVTRRRGKAH
                     ERQSSRARRLTTPIPNPSPQGGGETQLVSLSNMKSAFERAHRARFGFIDRSKELIIEA
                     VSVEAVGGGSRFRERVHKTTRAPLPPPARRTRFFAGGKWRRALVYMRGTLVPGQKVRG
                     PAIIIEPHQTIVVEAGWRAELTAKDHLVLRRIEKLARARAVGTRADPVMLEVFNNLFM
                     SIAEQMGVALQNTAYSVNIKERLDFSCAVFDGDGSLVANAPHMPVHLGSMDRAVETII
                     RENRGKIRPGDVYAINAPYNGGTHLPDITVCTPVFSVPSSRRGGPILFWVASRGHHAD
                     VGGISPGSMSPNATTIEQEGVYIDNFKLAERGRFREQALDALLTGGKYPARNPLQNVN
                     DLKAQVAANEKGVQELRKMVRQFTLPVVRAYMRHVQDNAAESVRRVIDRLHDSAFGTE
                     MDQGTVIKVRISVDKKQRAATVDFTGTSPQQSTNFNAPEPVTRAAVLYVFRVMVDDDI
                     PMNAGCLRPIKIIIPQKSLLSPEFPAAVVAGNVETSQEVTNCLFGALGAMAAAQGTMN
                     NLNFGNARYQYYETICSGSPAGPGFPGTDAVHTHMTNTRLTDPEVLEFRYPVLLEDFH
                     IRKGSGGRGRWNAGDGIVRTIRFLEGMECTILSG"
BASE COUNT         1035 a         2015 c         1980 g         1038 t
ORIGIN      
        1 atctttgagc cgatcatcaa tgcggtctgg tcggagaata tcgcgccgaa ggcgccgctc
       61 agcggcccct cgccggaggc gcaggctcat ctcatcgatc tgccgatcga ctttgcgtcg
      121 ggccagcgcg tcacgcgcgg cggcttcgtc gagcatttcc ggcttggtga ggacggccgc
      181 ttcgacgaga cgcaatacca gctcctgtcg cgcggcggct atgcctcgcg ccaggactct
      241 gaaggagccg aggcgggcga cccatggggc tggcatggac cgggcggata tacaggcggc
      301 ggccgctctt actatccgtc gcaggggtgg cagtcaccgc cgccggccag aggactgttt
      361 gcgccatggc aagataaccg aatgcgccgc aattcggact tctggggtgg acgtttcaat
      421 tgaagtcccg gccgagagaa accggaatgt ggatgcggcg cgcgatcgtg cttgctggct
      481 tgatcgggtc gttgtccgtc gccggcgcgc aggatttcaa gatcgaggac gtgagctccg
      541 cgcgaagcgt tccggtgacc cagctcaagc cgggtatcat cgtcttcagc gatcaggagg
      601 gcggcgccgc cggcgatgag gcggcaaagc tcgtccgttt cgaggaatgg gcgcgcacgc
      661 gcccggccca gcggaaattc cttgcgctgt ttcccggcta cgtcgagccg atcgtcacca
      721 aagaggcgag ggccgagcag aagaccgtgg ccaacgccga cgccaagacc gacgcctccc
      781 tcggtgcgaa gggcgacgcc aaagccgaga cgggtccggt cctcgagaag ctctacgtgt
      841 acgtggcgca ggcgcgtttc gttctcgacc ggccgccaag cgcggtcgat ctttcgcgct
      901 acgtgacgct gccgtttctc gagcggatcg atccggcgat caagcacaag gtgatcgccc
      961 cggccgacgt gcccgcactc aaggacccgc agggcaccgg caatgaaaat ccggatcgca
     1021 aatggtgcac gggacgcccg acgtcagtct gcatccaatc gacctacatg ctcgagggca
     1081 agttgccgct cggcatcatg ctcgtgaaca agctgcgcga cagcgtcaag aaagtctccg
     1141 accatatcgc ttttatcagc gagctgtcgc tgctcccgcc ggaagccatc gatcaagccg
     1201 gcctgaagga actgaccggg cttgacacgc cggtcagcgg cgtgctcgag caaaatctct
     1261 tctacgtcaa tcagatcctg aaattcggaa agttcttcgg cgtgttccag agccacccgt
     1321 ccgacgccga caagaccgtc gtcaccgcgt tcatggcgct cgcgatcaag gcgagcgtgc
     1381 tcgacgagcg gcgcgggttc gagaacgtgc cggtcctgcg caatctcgtg ccggcgcagg
     1441 tgctgatggg caaatcgtca ttcaactccg gcgcttcgat cagcgccggc ctgccgcaat
     1501 acgcacgcaa cgagatcagg acgattgcca ccattctcgc gcgcgacaag gcggcgcagt
     1561 agcggtccgg ctaggcggcg cgcgccttct ctccgcggtc gagcgattgc agaacttcat
     1621 cgacagtctg cacgtcggca aactggccat agagcgccga cagcgacgcg ttgtgctcct
     1681 cgtcggagga agcggcgagg ccgtccgcca ccatgatcgt cttgaagttg agcatcattg
     1741 cgtcgcgcgc cgtgctttcg cagcagatgt tggtggcggt gccggcgatg aggacggtat
     1801 cggcatcgcg ctcgcgcagg cgccgctcga cgtcggagga gccgtgaatg aaggcgctgt
     1861 agcgcgtctt ggtaaggcac gtatcttccg gccggatgtc gttctggtgc cagaattcga
     1921 aaccctcttg gccttcctcc atcgcctcgt agcggcgccg catccgctcc ggcgtcatca
     1981 ggccatcgtg gtagttggac cagctctggc gcgtaccggc ggtgccgttg cggatccaga
     2041 cgacgtggcc gccgcggcgg cgcaattcgc caccgaggcg gttgatgttc ggcacgatcc
     2101 tgcgcgccat cggcacctcg ccctggtggc cgggcttgac gaagtagttc tgcatgtcga
     2161 tcaccaggag ggcggtgcgg cggggctcga tcgtgtcgaa ggggtgcagc ttgccgacgc
     2221 gggcgcgcac gcgttcgcgc gcggtttccg agatggcgat cgtgtgcatc tttccgcttg
     2281 gctcccgtcg ccataagttc cgggccgacg acatcgcgct tcatcttccc aaagcttgaa
     2341 ccacctcaca agccatggaa cacgcgtccc gacggtggga attctggatc gaccgcggcg
     2401 gcaccttcac cgacgtgatc ggcaggcggc ccgacgacag gctcgtcgct cacaaattgc
     2461 tttcggaaaa tcccgaggcc taccgcgacg cggcggtcgc cggcatccgt cacctgctcg
     2521 gccttggtcc cggcgagccc atcccggccg accgtctcgg cgccgtcaag atgggcacca
     2581 cggtcgcgac gaacgcgctc ctcgagcgca agggcgagcg cacgcttctg gtgatcaccc
     2641 gcggcttccg cgacgcgctg cgcatcggct accaggcgcg gccgaagatt ttcgcgcgcc
     2701 acatcgtcaa gccggacatg ctttacgagc gcgtcgtcga ggtcgacgaa cgggtgcgcg
     2761 ccgatggcac ggtcgaacgc gaactcgacc tcgacgcggc ccgctccgcg cttgtgcagg
     2821 ccaggcatga cggcatcgac gccgtcgccg tcgttttcat gcatgcctac cgccacagcg
     2881 atcacgagcg gcgcgtcgcg gcgctcgcgc gcgatctcgg cttcccgcag gtgtcggcga
     2941 gccatgaagt ctcgccgctc atcaagctcg ttggtcgcgg cgataccacc gtggtggaca
     3001 gctatctctc gccaatcctg cgccgctacg tggcgcagat cgcggaggag ctcgttccct
     3061 ccccccttgt gggggaggga atggcggggg ggccggaggc gcggcgccgt tcgtcgacgc
     3121 ttgcgcaaga cctcccgacc cctacccccg acccctcccc acaaggggaa ggggagaacc
     3181 acccccgcct gatgttcatg atgtcctcgg gcggattgac cgcggccgag ctgttccgcg
     3241 gcaaggacgc gatcctttcg ggtccggcgg cgggagtcgt cggcatggcc gagaccgggc
     3301 gcgaagcggg ctttgccagg ctcatcggct tcgacatggg cggcacttcg acggacgtat
     3361 cgcatttcgc cggcgcgtat gagcgggcat tcgagaccga ggttgcgggc gtgcgcatgc
     3421 gcgcgccgat gatgctcatt cacaccgtgg ccgcgggcgg cggctcgatc ctgcatttcg
     3481 acggcgcgcg ctttcgcgtc ggccccgatt ccgccggcgc caatcccggc ccgaaatgct
     3541 atcgccgcgg cggtccgctc gcggtgaccg acgccaatgt gatggtcggg aagttgatcc
     3601 ccgacttctt cccgaaaatt tttggaccgc gacaggagga gccgctcgac gccgacgcgg
     3661 tgcgcgaggg ttttgcggcg ctcgccgaaa ggatcggcga cggccgcacc ggcgaggagg
     3721 ttgccgacgg cttcatcagg atcgcggtcg agaacatggc gaacgcgatc aagaaaatct
     3781 cggttcagcg cggttacgac gtgacccgct atgcgctcaa ttgcttcggc ggcgccggcg
     3841 gccagcacgc ctgcctggtc gccgacgcgc tcggcatgac cagcgtgctc attcatccgt
     3901 tctcgtcact cctctccgct tatggaatgg gcctcgccga cattcgcagc gtgcgccagc
     3961 aagcgatcga aaagccgttc gatgagaacg cgcgcgcgac ggtcgccggc gtagcgggcg
     4021 cgcttgggcg cgccgtgatc gcggaggtcg ccggccaagg cgtagcggtg gagaagatca
     4081 aggcccacgt gcgcgcccac atccgctacg ctggaaccga cacggcgctg atcgtcgagg
     4141 ccggcacttg ctcctttccc tccccccttg tgggggaggg aagggcgggg ggtcgcaaag
     4201 tgactcgccg acgtggaaag gcgcacgagc gccagtcttc gcgggcgcga cgcctcacga
     4261 cccctattcc caacccctcc ccacaagggg gaggggagac acagctcgtc tctctcagca
     4321 atatgaagtc cgccttcgag cgcgcgcata gagctcgctt cggcttcatc gaccgcagca
     4381 aggaactgat catcgaggcg gtctccgtcg aggccgtcgg cggcggctca cgcttccgcg
     4441 aacgcgtgca caagaccacg cgggcaccgc tgccgccgcc ggcgcgccgc acgcggttct
     4501 tcgccggcgg caaatggcga cgggcgctcg tctacatgcg tggcaccctc gtgcccggac
     4561 aaaaggtgcg cggccccgcc atcatcatcg agccgcacca gacgatcgtc gtcgaggcgg
     4621 gctggcgggc cgagcttacc gccaaggatc atctggtgct gcggcggatc gagaagctcg
     4681 cccgtgcccg cgccgtcggc acccgcgccg atccggtgat gctcgaagta ttcaacaatc
     4741 tgttcatgtc gatcgccgag cagatgggcg tggcgctgca aaacaccgcc tactcggtaa
     4801 acatcaagga gcggctcgat ttctcttgcg cggtgttcga tggcgacggg tcgcttgtcg
     4861 ccaacgcccc gcacatgccg gtgcatctcg gctcgatgga tcgggcggtc gagaccatca
     4921 tccgcgagaa ccggggaaaa atccgtccgg gcgatgtcta cgccatcaac gctccctaca
     4981 atggcggcac gcatctgccc gatatcacgg tgtgcacgcc ggtgttttct gttccctcct
     5041 cacgacgggg cgggccgatc ttgttctggg tggcctcgcg cggccaccat gccgatgtcg
     5101 gcggcatctc gccgggctcg atgtcgccga acgccaccac gatcgagcag gaaggcgtct
     5161 acatcgacaa tttcaagctg gccgagcgcg gccgcttccg cgagcaggcg ctcgatgcgc
     5221 tgctgaccgg cggcaagtat ccggcgcgca atccgctgca gaacgtcaac gacctcaagg
     5281 cgcaggtcgc cgccaacgag aagggcgtgc aggaactgcg caagatggtc cgccagttca
     5341 cgctgcccgt cgtgcgcgcc tatatgcgtc acgtgcagga caacgccgcc gagagcgtgc
     5401 gtcgcgtcat cgaccggctg cacgacagcg cgtttggcac cgagatggac cagggcaccg
     5461 tgatcaaggt gcgcatcagc gtcgacaaga agcagcgcgc cgcgaccgtt gatttcaccg
     5521 gcaccagccc gcagcagtcc accaacttca acgcgcccga gccggtgacg cgggcggccg
     5581 tgctctacgt gttccgggtc atggtcgacg acgacatccc gatgaatgcc ggctgcctgc
     5641 gcccgatcaa gatcatcatt ccgcagaaat cgttgttgtc gccggagttt cccgccgccg
     5701 tcgtcgccgg caacgtcgag acgtcgcagg aggtgaccaa ttgtctgttc ggcgcgctcg
     5761 gcgccatggc cgcggcgcag ggcaccatga acaatttgaa cttcggcaat gcgcgctatc
     5821 aatactacga gacgatctgc tccggctcgc cggccgggcc cggcttcccc ggtaccgatg
     5881 ccgttcacac ccacatgacc aacacgcggc tcaccgatcc agaagtgctg gaattccgct
     5941 atcccgtcct gctcgaggac tttcatatcc gcaagggttc gggcggccgc gggcgctgga
     6001 atgcgggcga cggtatcgtt cgcaccatcc gtttcttgga aggaatggaa tgcactattc
     6061 tgtccggg
//
LOCUS       DATMQB010000197         4839 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_372120, whole genome shotgun sequence.
ACCESSION   DATMQB010000197 DATMQB010000000
VERSION     DATMQB010000197.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4839)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4839)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4839
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_372120"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..379)
                     /locus_tag="VNY79_06040"
     CDS             complement(<1..379)
                     /locus_tag="VNY79_06040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72040.1"
                     /translation="MIGLSRGLGRFILAAGALAACAGVASAQTSPDQPPSNSVCSRLE
                     AQLATVDRGTPDPARADLISHAEEAIGKQQADLDRLAAQSHRVGCEGIAGFFSLFTGQ
                     SQQCQPLNAQIQQIRGNLDRMMSD"
     gene            complement(504..1139)
                     /gene="maiA"
                     /locus_tag="VNY79_06045"
     CDS             complement(504..1139)
                     /gene="maiA"
                     /locus_tag="VNY79_06045"
                     /EC_number="5.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016034 - maleylacetoacetate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maleylacetoacetate isomerase"
                     /protein_id="HWX72041.1"
                     /translation="MKLYSFFRSSAAYRVRIALNLKNLAYETLPVHLVKDGGHNKRPE
                     FRAVNPQMRVPVLVAPNGELLIQSPAIIEYLEETHPEPPLLPKDPIARAKVRALADII
                     ACDIHPLNNVGPLRYLKNEMHQEQSAIDAWYHHWVRSGFETLEASVRPAPYAFGTEVT
                     LADVFLVPQVYNARRLKVPLDAFPKIVGIEAACLALAAFDRACPEKQPDAE"
     gene            complement(1234..1776)
                     /locus_tag="VNY79_06050"
     CDS             complement(1234..1776)
                     /locus_tag="VNY79_06050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family winged helix-turn-helix
                     transcriptional regulator"
                     /protein_id="HWX72042.1"
                     /translation="MGSHGPIESEVRTDPSAAPAPGNQAVLKLEDFLPYQLNVVASLT
                     SQALSRVYARRYRIGVPEWRVLVTLGQYGVMTGKAVGAHSHMHKTKVSRAVALLEKRR
                     LLVRRANREDMREAFLSLTSAGRAMYEELAPHALDFARRLTEILTPQDREAFNRAVQQ
                     LTARSAELAAEVVQQGKDEN"
     gene            2013..2963
                     /locus_tag="VNY79_06055"
     CDS             2013..2963
                     /locus_tag="VNY79_06055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HWX72043.1"
                     /translation="MSSDFASSADLADKTITFDAIGPDLYAFTAEGDPNSGVIVGDDG
                     VMVVDAQATPVMARQVIDRVAKITDKPIKYVLLTHYHAVRVLGASAYVGAEILASDTT
                     RALIVERGKQDMDSEIGRFPRLFRAVESIPGLTWPSITFPDQMSVWLGRREVRIMRIG
                     RGHTAGDVVALVPDANVVFSGDLVEYQSACYCGDAHFTDWPATLDRLAEFSARALVPG
                     RGAALKTPHEVADGIALTEDFLTTLYGSVVESVAKGHSLKESYDAARAAMDPRFASFA
                     IYEHCMPFNVSRAYDEASGIDHPVIWTAERDRAMWAALRG"
     gene            3092..4693
                     /locus_tag="VNY79_06060"
     CDS             3092..4693
                     /locus_tag="VNY79_06060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HWX72044.1"
                     /translation="MHKSVYRYEYRRSRDQDTRSPVRHAVVVVGAGPVGLAVAVDLAQ
                     RGVRVVLLDDSDRIGEGSRGICWSKRTLEILDRLGVGERLVARGVTWKLGKVFCGDEL
                     LFAFDLLPEEGHKMPGFINLQQFYLEKALVDRAGEIENIDLRWKNRVAGLEQRNDGVR
                     LTIETPEGAYRLDADWLIAADGARSTVRGLLGLGFSGVTFEDKFLIADVRMAADFPTE
                     RRFWFAPKFHAGQSALMHRQPDNVWRIDLQLGPDADPIAEQEPERVRARLAKVLAPHD
                     FELEWVSVYTFNCRRLDRFVHDRVIFIGDAAHQVSPFGARGANSGIQDAENLAWELAA
                     MLAGEGGEALIASYDIERTQAADENIGHSTRSTDFMSPHSRAERGLRDAVLALAPKAE
                     FARRMVNSGRLSLPAVYDSPLSTPDEAPFAGAAKLGAPLPDAPVTRPDGTPAHLLENL
                     RDGFELICVKPDDDGDGWRHVPDGIRRTVIGEDLFDRTGIFAQRFDATPGAAYLVRPD
                     QHLCARWRRFDASKVAAAHARALGR"
     gene            4717..>4839
                     /locus_tag="VNY79_06065"
     CDS             4717..>4839
                     /locus_tag="VNY79_06065"
                     /inference="COORDINATES: protein motif:HMM:NF022385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2783 domain-containing protein"
                     /protein_id="HWX72045.1"
                     /translation="MAKLVTASRFADPDAAYVALVDARRNLSDAEAAALDTKLVL"
BASE COUNT          789 a         1598 c         1618 g          834 t
ORIGIN      
        1 gatcgctcat catgcggtcg agattgccgc ggatctgctg gatctgcgcg ttgagcggct
       61 ggcactgctg tgactggccg gtgaacaggg agaagaaccc cgcgatccct tcgcagccga
      121 cacggtgcga ctgcgccgcc aggcggtcga gatcagcctg ctgcttgcca atggcctctt
      181 cggcatggct gatcaggtcg gcgcgcgccg gatcgggggt gccgcggtcg acggtcgcga
      241 gctgcgcctc cagccgtgag caaacggaat ttgagggcgg ttgatcaggg gaagtctgcg
      301 ctgacgcaac gccggcgcaa gcggcaagcg cgccggcggc aagaatgaaa cggccgaggc
      361 cgcgtgacag cccgatcatc gttgcgtccc ggtccccgat tccacccaag ccccatgcct
      421 gcgacgcaat ggtgaccaaa gtgtgaagtg gagaaaatcc ccgcaagtca tgccatcccc
      481 agggtttttc ctccaaggct gggtcactct gcatccggct gcttttccgg acacgcgcgg
      541 tcgaaggcgg caagcgcgag gcaggcggct tcgatgccga cgatcttcgg gaaggcatcg
      601 agcggcacct tcaggcgccg cgcattgtag acctgcggta ccaggaagac gtcggcgagt
      661 gtcacctccg tgccgaaggc gtagggcgcc ggccgcaccg aagcctcaag ggtctcgaac
      721 ccgctgcgca cccagtgatg gtaccacgca tcgatcgcgc tctgctcctg atgcatttcg
      781 tttttcaggt agcgcagcgg cccgacattg ttgagcggat ggatatcgca ggcgatgatg
      841 tccgccagcg cgcgcacctt ggcgcgggca atcgggtctt tgggcagcag cggcggttcg
      901 ggatgagtct cctcgagata ttcgatgatc gcgggcgact ggatcaggag ctcgccgttc
      961 ggcgccacca aaaccgggac gcgcatctgc ggattcaccg cgcggaattc cggccgcttg
     1021 ttgtggccac catcctttac gaggtgaacc ggcagcgtct cgtaggcgag gtttttcaga
     1081 ttgagcgcga tgcgtacccg gtaagcggcg gaggatcgga agaaggagta gagtttcatg
     1141 gttcgacctg gccgttattt caaaacgccg caaagcacgg gagcggcatg acaggccgcg
     1201 cacgcaacga tcgcgtcgaa ggagatgggc gcgtcaattc tcgtccttcc cctgctggac
     1261 cacttcggcg gcgagctcgg cggagcgggc cgtgagctgc tgcaccgcgc ggttgaacgc
     1321 ttcgcggtct tgcggggtca gaatctccgt caggcggcgc gcgaagtcga gtgcatgcgg
     1381 cgccaactcc tcgtacatcg cccgtccggc gctggtgagc gacaggaagg cctcgcgcat
     1441 gtcctcgcgg ttggcgcgcc gcaccaggag ccggcgcttt tcgaggagcg cgaccgcgcg
     1501 cgataccttg gtcttgtgca tgtgcgagtg ggcgccgacc gcctttccgg tcatgacccc
     1561 gtactggccg agcgtcacca gcacccgcca ttccggcacg ccgatccggt agcgccgcgc
     1621 gtagacgcgc gaaagcgcct gcgaggtaag gctcgccacc acgttgagtt ggtagggaag
     1681 gaaatcctcg agcttcagca ccgcctggtt gccgggcgcc ggggccgcgg atggatcggt
     1741 cctgacttcg ctttcgatcg gcccgtgact gcccatggca ccatctatgg caccgcatcc
     1801 ggcgtgccgt ctgcgtcggc gcaaacccgg ttgccgcacg accagagagg atggacgaag
     1861 ttgccgtgcg gcgcaacgcg tgccagagcg gccgccgatc ccgcacggct ggcggcggcg
     1921 gcacacagcg ggcttgatcg aactcatcga attccatagg tgagcgggta atttcaggga
     1981 taggggaaag gaaacgccca gcgcgtatgt cgatgagctc ggattttgcc tccagcgcgg
     2041 atctcgccga caagaccatc accttcgatg cgatcggtcc cgatctctat gccttcaccg
     2101 ctgaaggcga tcccaattcc ggggtgattg tcggcgacga tggcgtgatg gtcgtcgacg
     2161 cccaggcgac gccggtgatg gcgcgccagg tgatcgatcg cgtggcgaag atcaccgaca
     2221 agccgatcaa atacgtcctg ctcacgcact accacgccgt gcgcgtgctt ggcgcctccg
     2281 cttatgtcgg ggccgaaatc ctcgcctcgg acacgacgcg agcgctcatc gtcgaacgcg
     2341 gcaaacagga catggattcc gaaatcggcc gcttcccgcg gctgtttcgc gcggtcgagt
     2401 ccattcccgg cctcacctgg ccgtcgatca cctttcccga ccagatgtcg gtatggctcg
     2461 gccggcgcga ggtgcgcatc atgcgcatcg gccgcggcca cacggcgggc gacgtggtcg
     2521 cgctggtgcc cgacgccaac gtggtgtttt ccggcgacct cgtcgagtat caatcggcgt
     2581 gctattgcgg cgacgcgcat ttcaccgact ggccggccac gctcgaccgg ctggccgagt
     2641 tttccgcccg ggccctggtg ccgggccgcg gcgcggcgct caagacgccg cacgaggtcg
     2701 ccgacggcat cgcgctcacc gaggattttc tgaccacgct ctatggttcg gtggtggaaa
     2761 gcgtcgccaa gggccactcg ctcaaggaat cctatgacgc ggcacgcgcg gccatggatc
     2821 cgcggttcgc gagcttcgcc atctacgagc actgcatgcc gttcaacgtc tcgcgcgcct
     2881 acgacgaagc gagcggcatc gaccatccgg tgatctggac cgccgagcgc gaccgcgcca
     2941 tgtgggctgc gctgcgtggc tgagcatgcg cggtgtcggg tggcggggcg ccgtctggag
     3001 ttctggcctg ggccaatcgg gcactgtcat gcccacccgg caaggccctg acgacatttt
     3061 gccgaccctg cggcgttgag cagtgagcga aatgcacaag tcggtctacc gctacgagta
     3121 ccgccgttcc cgcgaccagg acacgcgatc cccggtgcgc cacgcggtgg ttgtcgtggg
     3181 cgccgggccg gtcgggcttg ccgtggcggt cgatctcgcg cagcgcggcg tgcgggtcgt
     3241 gctgctcgac gattccgatc gcatcggcga gggctcgcgc ggcatctgct ggtcgaagcg
     3301 cacgcttgag atactggacc ggctcggcgt cggcgaacgt ctcgttgcgc gcggcgtcac
     3361 ctggaagctc ggcaaggtct tctgcggcga cgagcttctg ttcgcgttcg atctcctccc
     3421 cgaggaaggg cacaagatgc ccggcttcat caacctgcag caattctacc tggagaaggc
     3481 gctggtcgac cgcgccggcg agatcgaaaa catcgatctg cgctggaaga accgcgtcgc
     3541 cggcctcgaa cagcgcaacg atggggtgcg tctgacaatc gaaacgcccg agggcgccta
     3601 tcggctcgac gccgactggc tcatcgccgc cgacggcgct cgttcgaccg ttcgcggcct
     3661 gctcggcctc ggcttttccg gcgtcacctt cgaagacaag ttcttgattg ccgacgtgcg
     3721 catggccgcg gattttccga ccgaacgccg cttctggttc gcgccgaaat tccatgccgg
     3781 ccagtcggcc ctgatgcacc gccagcccga taacgtctgg cgcatcgacc tgcagctcgg
     3841 ccccgacgcc gatccgatcg ccgagcagga accggaacgc gtccgcgccc gcctcgccaa
     3901 agtgctggcg ccgcacgact tcgagctcga atgggtctcg gtctacacct tcaattgccg
     3961 gcggctcgac cgcttcgtgc atgaccgcgt gatcttcatc ggcgatgcgg cgcatcaggt
     4021 gtcgccgttc ggtgcccggg gcgccaattc cgggatccag gacgccgaga acctagcgtg
     4081 ggagctcgcg gcaatgcttg caggggaagg cggcgaggca ttgatcgcga gctacgatat
     4141 cgagcggacc caggcggctg acgagaatat cggccactcg acccggtcga ccgatttcat
     4201 gtcgccgcat tcgcgcgctg agcgcgggct gcgcgatgcc gtgctcgcgc tagcgccgaa
     4261 ggccgagttc gcccggcgca tggtcaattc cgggcgcctg tcgctgccgg cggtctacga
     4321 ttcgccgctg tcgacgcccg acgaggcgcc gtttgccggc gcagccaagc tcggcgcgcc
     4381 gctgcccgac gcgccggtga cgcggccgga cgggacgccg gctcacctcc tggagaacct
     4441 gcgcgacggc ttcgaactca tctgcgtcaa gcccgacgac gatggcgacg gatggcggca
     4501 cgtgccggac ggcatccggc gcaccgtcat cggtgaagat cttttcgacc gcacggggat
     4561 tttcgcgcag cgcttcgacg ccacgcccgg cgcagcctat ctcgttcgcc ccgatcagca
     4621 tctgtgcgca cgctggcgcc gcttcgatgc cagcaaagtg gccgcggcgc acgcgcgcgc
     4681 gctcgggcgc tgacgatccg aacaacgagg tgcccgatgg caaagctcgt caccgcgtcg
     4741 cggtttgccg acccggacgc cgcctatgtc gcgctcgtcg atgcgaggcg gaatctgtcg
     4801 gacgccgaag ccgccgctct cgataccaag ctcgtgctc
//
LOCUS       DATMQB010000198         3091 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2860383, whole genome shotgun sequence.
ACCESSION   DATMQB010000198 DATMQB010000000
VERSION     DATMQB010000198.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3091)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3091)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3091
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2860383"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..946)
                     /locus_tag="VNY79_06070"
     CDS             complement(<1..946)
                     /locus_tag="VNY79_06070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase"
                     /protein_id="HWX72046.1"
                     /translation="MTPRLFIPADAGALAVGAEEVAAAIGAAAARRKVAVEIVRTGSR
                     GLYWLEPMVELETPAGRVAYGPVAASDADALLGAILADGAHKLRLGPTEDIPWLKRQT
                     RLTFARCGVVDPRSLADYRAHGGYKGLERALAAGAEAVVEEVVQSGLRGRGGAGFPTG
                     IKWRTVAQTQAPQKYVVCNADEGDSGTFADRMIMEGDPFVLIEGMTIAAIAVGATKGY
                     VYIRSEYPHSVATMEAAIAAARRDGVLGKRVADSAYAFDMEVRVGAGAYVCGEETSLL
                     DSLEGKRGLVRAKPPLPAHKGLFGRPTVINNVLSFASVP"
     gene            complement(943..1434)
                     /locus_tag="VNY79_06075"
     CDS             complement(943..1434)
                     /locus_tag="VNY79_06075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018315838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit gamma"
                     /protein_id="HWX72047.1"
                     /translation="MHQDSRNLRRVPWDKEIALERIREQLDREGPLLPVLHALQDEFG
                     YIEEAAEPLIAEALNITRAEVHGVVTFYHDFRREPAGRHVLKLCRAEACQAAGGDPLA
                     LRAEARLGVPMGETAADGSVTLEPVYCLGLCALAPSAMLDGRVVARLDETRLDALLAE
                     AQQ"
     gene            1729..3081
                     /locus_tag="VNY79_06080"
     CDS             1729..3081
                     /locus_tag="VNY79_06080"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HWX72048.1"
                     /translation="MQKLASRPAQAEPAFGPSLASDADAAGAYLAEMEAALQGLGPSA
                     EREGERRAEAQAIKESARTVKERFFRHHAIAIYDEITGRGARALRVSELLAAASSRYP
                     ALLPTPEVIKQERALMKQIAKEGHEVDQGLFLAQILADERCGMHLIHAMLKPKREALE
                     KLAEFRRSGFADLGLAKVERKGKVGHVTLSNLKFLNAEDDRTTVALEIAADLVLLDEA
                     IEVGVLRGATVEHPKYAGRRIFNAGLNLTHLYYGQISFEFFMERELGLLHKMFRGHWR
                     SESYDEQYEDYVEKPWVAAVEAFAIGGGCQLLCIMDRVIAERGSYFNLPASKEGFIPG
                     AANLRLPRLVGIKLARDAIFFERVFHADTPEGRMICDEVVAAEEMDAAIERNALQLVS
                     AGMTSTVAQRKALRVAEEPLAIFRRYMATYARQQSRCIYDPKLIDNLEHSWEPGRRRM
                     "
BASE COUNT          543 a         1047 c         1002 g          499 t
ORIGIN      
        1 tcggcaccga cgcgaacgac agcacgttgt tgatcaccgt cgggcggccg aacaggccct
       61 tgtgcgccgg cagcggcggc ttggcgcgca cgaggccgcg ctttccttcg aggctgtcga
      121 gcagcgaggt ttcctcgccg cagacatagg cgccggcgcc gacgcggacc tccatgtcga
      181 acgcataggc tgagtccgct acgcgcttgc cgagcacccc gtcgcgccgc gcggcggcga
      241 tggccgcctc catcgtggcg accgaatgcg ggtattcgga gcggatgtaa acgtagccct
      301 tggtcgctcc gaccgcgatc gcggcgatcg tcatcccctc gatcagtacg aagggatcgc
      361 cctccatgat catgcggtcg gcaaaggtcc cgctatcgcc ctcgtcggcg ttgcagacca
      421 cgtatttctg cggcgcctgg gtctgggcta cagtgcgcca tttgatgccg gtggggaatc
      481 cggcgccgcc gcggccgcgc aggcctgact gcacgacctc ctcgacgacc gcttcagcac
      541 cggccgcaag ggcgcgttcg agtcccttgt agccgccgtg cgcgcgataa tcggccagcg
      601 agcgcggatc gaccacgccg cagcgggcga acgtcaggcg cgtctgccgc ttgagccagg
      661 gaatgtcctc ggtcgggccg agccgcagct tgtgcgcgcc gtcggcgagg atggcgccga
      721 gcagagcgtc ggcatcgctc gccgcaaccg gtccataggc gacccggcct gccggcgtct
      781 ccagctccac catgggctcg agccagtaaa gtccgcgcga accagtgcgc acgatttcca
      841 ccgcgacctt gcgccgcgcc gccgcagcgc cgatcgcggc cgcaacctct tcggccccga
      901 ccgccagcgc cccggcgtcg gccggtatga acagccgcgg cgtcattgct gcgcctccgc
      961 cagcagcgca tcgagccgcg tctcatcgag ccgcgcgacc acccggccgt ccagcatggc
     1021 cgacggcgcc agcgcgcaca ggccaaggca atagaccggc tcgagcgtga cgctgccgtc
     1081 ggcggcggtt tcgcccatcg gcacgcccag gcgcgcctcg gcgcgaagcg ccagcggatc
     1141 gccgccggca gcttggcagg cttcggcgcg gcagagcttg agcacatgcc ggcccgcagg
     1201 ctcgcgccgg aagtcgtgat agaaagtgac gacgccgtgc acctcggcgc gcgtgatgtt
     1261 caaagcctcg gcgatgaggg gctccgcagc ctcctcgatg tagccgaatt cgtcctgcaa
     1321 agcgtggaga acaggcagaa gcggcccttc gcgatcgagc tgttcgcgaa tgcgctcaag
     1381 cgcgatttcc ttgtcccagg gaacccggcg cagattgcgg ctgtcctgat gcattggctc
     1441 ggcccggagc ggcgtccttt cgtttgctgt ggttctaacg ttctacccat atacatgttt
     1501 attttacagt aactccgaaa gccgggtcga taaacagtaa ggacgccgca tccttgccaa
     1561 gcggcgtacc caagccgcct ttccgcattg cagcagcgga tgtcagagtg ggccgtgagc
     1621 gggcaatcgc ccaatcgatc tggacttgcc cgataaaaac gaagattgat gagcgcgagg
     1681 ccgccgctcg tctccttgcc gcggtgcggc gttatcaggg aggtctccat gcagaagctc
     1741 gcaagccgcc cggctcaagc cgaaccggcc ttcggcccgt cgctggcgag cgacgccgac
     1801 gctgccggcg cctacctcgc tgaaatggaa gcggcgctgc aagggctcgg accaagcgct
     1861 gagcgcgaag gcgagcgccg ggccgaagcg caggccatca aggagagcgc gcgcaccgtc
     1921 aaggagcggt tcttccgaca tcatgccatc gcgatctacg acgagataac gggccgcggc
     1981 gcgcgcgcat tgcgcgtgtc cgaactgctt gccgcggctt caagccgcta tccggcgctc
     2041 ctgccgacgc ccgaggtgat caagcaggaa cgcgcgctga tgaagcagat cgccaaggaa
     2101 ggccacgagg tcgatcaggg cctgttcctc gcccaaatcc tcgccgacga gcgctgcggg
     2161 atgcatctca tccatgcgat gctcaagccg aaacgtgagg cgctggagaa actcgccgaa
     2221 tttcgccgca gcggctttgc cgatctcggc ctggccaagg tcgaacgcaa gggcaaggtc
     2281 ggccatgtga ctctgagcaa cctcaaattc ctcaacgccg aggatgatcg aacgactgtg
     2341 gcgctggaaa tcgccgccga tctcgtcttg ctcgacgagg caatcgaggt cggggtgctg
     2401 cgcggcgcga ctgttgagca tccgaaatat gccggacgcc gcatcttcaa tgccggcctc
     2461 aatctcacgc atctgtatta cggccagatc tcgttcgagt tcttcatgga gcgggagctg
     2521 gggctgctgc acaagatgtt ccgcggtcac tggcgttccg aatcatacga cgagcaatat
     2581 gaggactacg tcgaaaagcc gtgggtcgcc gctgtcgagg ccttcgccat cggcggcggc
     2641 tgccagcttc tctgcatcat ggaccgcgtc attgccgagc gcggctcgta cttcaacctg
     2701 ccggccagca aggaagggtt catccccggc gccgccaatc tgcggctgcc gcgcctcgtc
     2761 ggcatcaagc tcgcgcgcga cgccatcttc ttcgagcgcg tgttccacgc cgacacaccg
     2821 gaagggcgaa tgatctgcga cgaggtggtc gccgccgagg aaatggatgc cgcgatcgaa
     2881 aggaacgcgc tgcaactcgt cagcgccggc atgacgagca cggtggcgca gcgcaaggcg
     2941 ttgcgcgtcg cagaggagcc gctcgcgatc ttccgccgct acatggccac ctatgcccgg
     3001 cagcagagcc ggtgcatcta cgatcccaag ctcatcgaca atctcgagca cagctgggag
     3061 ccgggccgcc gacgcatgtg acggcgttcg c
//
LOCUS       DATMQB010000199         3197 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1308853, whole genome shotgun sequence.
ACCESSION   DATMQB010000199 DATMQB010000000
VERSION     DATMQB010000199.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3197)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3197)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3197
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1308853"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..446)
                     /locus_tag="VNY79_06085"
     CDS             complement(<1..446)
                     /locus_tag="VNY79_06085"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72049.1"
                     /translation="MRRKRAFNRGRLVLIALAGGIGYLLGGWHAATPRNTDLSPAQSV
                     ALRFPERADGPVTMSAVRDTVPSAMNSNGNMVLGDPQLLLLNPDPMVPRPSKAPQPLA
                     ATAAPEAAPPLPGMPSPRPAPAAARRTSQAVPPAALAYRQTARPGFV"
     gene            complement(632..1506)
                     /locus_tag="VNY79_06090"
                     /pseudo
     CDS             complement(632..1506)
                     /locus_tag="VNY79_06090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713642.1"
                     /note="frameshifted; internal stop; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CarD family transcriptional regulator"
     gene            complement(1608..1946)
                     /gene="fdxA"
                     /locus_tag="VNY79_06095"
     CDS             complement(1608..1946)
                     /gene="fdxA"
                     /locus_tag="VNY79_06095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008140202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin FdxA"
                     /protein_id="HWX72050.1"
                     /translation="MTYIVNDNCIKCKYMDCVEVCPVDCFYEGENMLVIHPDECIDCG
                     VCEPECPVDAIKPDTEPGAEKWLSVNAEFAKAWPNITAKKEPPTDAKEWEGVPNKFDG
                     YFSPNPGTGD"
     gene            complement(2047..2316)
                     /locus_tag="VNY79_06100"
     CDS             complement(2047..2316)
                     /locus_tag="VNY79_06100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015670041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein"
                     /protein_id="HWX72051.1"
                     /translation="MSAERDRQRIDKWLWHARLVRTRGAAAALAGSGHVRVNGARIGA
                     PSRFVRIGDVITVALDRTVRVLKVKGFIERRGPAKACDGLYEEMV"
     gene            complement(2317..>3197)
                     /locus_tag="VNY79_06105"
     CDS             complement(2317..>3197)
                     /locus_tag="VNY79_06105"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="helicase"
                     /protein_id="HWX72052.1"
                     /translation="FTITNTMTSLTGASGEDFASILRSLGYRMDRRPKPPEPAPPLAE
                     QQALAAASADDATGQHEGATPDAAAIGDPLSSDTSAVAAEPPDSPVENPAPPTEPTDA
                     APASTAIPEVPPEAAPTFADEALPEPGVEPTTAEAASKAEALAARVGGTTAVDGSRVA
                     AEEPALIEVWRPGRAEGRRPRFKPRRGRAETADATPLASDSKARPASAEAGSAPASAA
                     HAATDANPPEERHGRHRRKGGQDRRFEHPRRDRERAPPHAARRERREPAPDPNSPFAK
                     LAALKARLEAEAKERR"
BASE COUNT          480 a         1063 c         1046 g          608 t
ORIGIN      
        1 acgaagccgg gccgggcggt ctggcgatag gcgagcgcgg cgggcggaac ggcctggctc
       61 gtgcgccgtg ctgccgctgg ggcaggccgc ggcgatggca tccccggcaa cggcggcgcc
      121 gcctcgggag cagccgttgc cgccaggggc tgcggcgcct tgctcggccg cggcaccatc
      181 ggatctggat tgagcagcag gagctgcgga tcgccgagca ccatgttgcc gttgctgttc
      241 atggcgctcg ggacggtgtc gcgcaccgcg ctcatggtta cgggaccgtc ggcgcgttcg
      301 ggaaatcgca gcgcgacgct ctgggccggc gaaaggtcgg tgttgcgtgg tgtcgcggcg
      361 tgccatccgc cgaggaggta gccgatgccg ccagccaacg cgatcaatac cagccggccg
      421 cgattgaacg ctctcttacg ccgcattccg acgcccccaa ccccttaccc gcacgccaca
      481 acgcctctgt cctttcaaat gaagcttaat ttatggctaa ccagcgggat tttatcgaca
      541 caagggtaac catgccgggg ggacgacaca agcaaaggcc cggcgtttcc gccgggcctc
      601 cacaacttac gccgcctgaa aagggttcgc gctacgccgc ctgttcctcg accacggcgt
      661 cctcttccac ctccggcttg gggccacggc gcggcccctt ggcgagagcc gcctcgatct
      721 ccttgatcgc ctcggtctcg gtcagccgtt gcacggccgc gacctcgcgc gacagtcggt
      781 cgagggcagc ctcataaagc tggcgctcgg agtaggactg ctcgggctgc gtgtccgacc
      841 ggaagaggtc gcgcacgacc tccgcgatcg cgacaatgtc gcccgaattt atcttggcct
      901 cgtactcctg ggcgcgccgc gaccacattg tgcgcttgat ccgcgcgcgg cccttgagcg
      961 tctcgagcgc ccggcggacc atcgcaccct cggcgagctt acgcatgccg acagaggcca
     1021 ccttcgacgt aggcacgcgc aaggtcatct tgtccttgac gaagttgatg acgaacagct
     1081 caagtcgtgc tccggcaacc tcctgctctt cgatcgagat gatctgcccc acgccatggg
     1141 cggggtagac gatgaactcg ttggtcttga agccttgcct ttgcgtcgtc ttcttcgcgg
     1201 tcattcccaa agttgctcct tccgcctccg gcttgcgccg atgagggcgt ttggtcgcgc
     1261 tgaccctgct gcgggggatc gcccgcgtgg tccgtgatgt cctccggctc gcgcgggagg
     1321 aggtctttct cgtcttgcgg ctcatgcccg tagtgctttt cttcgaacgg taacgcgttt
     1381 tttcagccac tgctctcgcg tggaaatcac gcctctccta agggttcctc gaaaaacgcc
     1441 ccgaaaagtc gtgctccggt tacgggcggg gcggttaatt ggggtgttct tctttatttc
     1501 tgtaatagca cattttgcgc caaaatcaaa gcgttatggc gctgccaagc gtcgcaccgg
     1561 ctgaaaaacc ttaacaaagg ttaagaagcg taaatggcag gcgcgcctca gtcgcccgtt
     1621 cccgggttag gtgaaaaata cccgtcaaat ttgttaggta ccccctccca ttccttggcg
     1681 tcggtcggcg gttccttctt cgccgtgata ttcggccagg ccttcgcgaa ttccgcgttt
     1741 acactcagcc acttctcggc gccgggctcg gtatcgggct tgatcgcatc caccgggcat
     1801 tcaggttcgc agacgccgca atcgatgcac tcgtcggggt ggatcacgag catgttctcg
     1861 ccctcataga agcagtccac ggggcagact tccacgcaat ccatgtattt gcatttgatg
     1921 caattgtcgt tgacgatgta ggtcatcggc tcaccgaacc cccggtttta cgcgagcatt
     1981 gctcctaccg catggctgat aggcgcgcaa gttcgccgcg tctgattgcg cgtgcgaaat
     2041 caacgctcag accatctcct catataggcc gtcgcacgcc ttggcgggac cccggcgctc
     2101 gataaatcct ttcaccttca gcacacgcac ggttcgatcg agcgcgaccg tgatcacgtc
     2161 cccgatccgc acaaagcggc tcggggcacc gatgcgcgcc ccattgacgc gcacgtgacc
     2221 tgagccggcg agcgcggcag cggcgccgcg cgttcgcacc aggcgggcat gccagagcca
     2281 cttgtcgatg cgctggcgat cacgttccgc cgacactcag cggcgctcct ttgcttcggc
     2341 ttcgagccgc gccttcagcg ccgcaagctt ggcaaaggga gaattggggt cgggtgcggg
     2401 ctcgcgccgc tcgcgccgcg cagcatgcgg cggcgcacgc tcccggtccc gccgcgggtg
     2461 ctcgaaccgg cggtcctggc cgcccttgcg ccggtggcgg ccatgccgct cctctggtgg
     2521 attggcgtcc gttgccgcgt gcgcggcgga cgctggggcg gatcccgctt cagcgcttgc
     2581 cggacgcgcc ttcgagtccg aggccagagg cgtggcgtcg gccgtttccg cgcggccgcg
     2641 acgaggcttg aagcgcggcc gccgcccctc ggctcggccc ggtcgccaga cttcgatgag
     2701 cgccggctcc tcagcggcaa cgcggctgcc atcaacagcg gtggtcccgc cgacccgcgc
     2761 cgcgagcgcc tccgccttgc ttgccgcttc cgcggtggtg ggttcgacac cgggttcggg
     2821 aagcgcctca tcagcgaacg tcggggccgc ctccgggggg acttccggga ttgccgttga
     2881 agccggcgcc gcgtctgtgg gctcggtggg gggagccggg ttctcgacag gcgaatctgg
     2941 cggttcggcg gcgacggccg acgtgtcgga cgatagggga tcgccgatcg ccgccgcgtc
     3001 aggcgtggcg ccctcatgct ggcctgtcgc atcgtccgcg gacgcggcgg ctaaggcctg
     3061 ttgctccgcc aaagggggag cgggctcggg cggtttcggg cggcgatcca tgcggtagcc
     3121 gagggagcgc aggatcgagg cgaagtcctc gcccgaggcg ccggtcagcg aggtcatggt
     3181 gttggtgatc gtgaaac
//
LOCUS       DATMQB010000200         4683 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2238275, whole genome shotgun sequence.
ACCESSION   DATMQB010000200 DATMQB010000000
VERSION     DATMQB010000200.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4683)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4683)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4683
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2238275"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..459)
                     /locus_tag="VNY79_06110"
     CDS             complement(<1..459)
                     /locus_tag="VNY79_06110"
                     /inference="COORDINATES: protein motif:HMM:NF015862.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HWX72053.1"
                     /translation="MVNERWRKAMKSSVMYSAAIATALALCWSPAANALSLDTAKKMA
                     AACEAKSKEQNWKMNISVVDSGANEIFFEKMDGAYLGSRDIALHKAQTSARFPFPTRF
                     VQELAYGKDLKGGAVPGIAQVPGIIAFAGGLPLMTADKMHVGGIGVSGGTA"
     gene            799..1239
                     /locus_tag="VNY79_06115"
     CDS             799..1239
                     /locus_tag="VNY79_06115"
                     /inference="COORDINATES: protein motif:HMM:NF013487.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c"
                     /protein_id="HWX72054.1"
                     /translation="MIRAFFAVAAIALGVGVALAQQDPIAARRALMKANGDEAKMGGA
                     MAKGEAPFDLAKARKMFATFEDASAKAPALFPDNSKTGGDTAAKPEIWENMDDFKARL
                     VKLGADAKAAGESVKDLDSFKAAFGNIGKNDCGGCHEKYRVKKS"
     gene            1398..2348
                     /locus_tag="VNY79_06120"
     CDS             1398..2348
                     /locus_tag="VNY79_06120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009055 - electron transfer activity
                     [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome"
                     /protein_id="HWX72055.1"
                     /translation="MRTVTLIAAGILVAALAVVWLLTLPATVPASALPAYTPNVDNGR
                     TMFNAGGCASCHATPAGEPDKMDRTRLGGGLGLKSPFGTFYVPNISPDPSDGIGEWSE
                     ANFVTALWKGTSPWGKNLFPAFPYTSYQNMALADMRDLFGYLKTLPPVTGRTRRHDLM
                     FPFNLRRLVGVWKLLFLHDGTFAPDPSQSAQWNRGAYLVNGPGHCAECHSPRNFLGAI
                     VESQRFAGGPSPDGKSFVPNITPVGLQHWSKDDIAWSQSDIATFLESGMDPSGDYAGD
                     VMAEVIRNISLLDTADRAAIAAYIVSLPPRQGPKPPPKKK"
     gene            2464..3423
                     /locus_tag="VNY79_06125"
     CDS             2464..3423
                     /locus_tag="VNY79_06125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018963943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HWX72056.1"
                     /translation="MHSGKGILLKLISAVLFTVMSALIRYLGVDYPTGQVIFFRSAFA
                     ILPVVIVYAWRGELMASLRTERPLGQAGRGALAIVAMFFNFGALARLPLIEANAISFT
                     TPLICVALAALLLKERVRIYRWSAVTVGFFGVLVVLAPHFSGEELRIVVASAASVAGV
                     VLALAGSVLNAGAVIQTRWLARSESTSSIVFYFSLICAVAGLATWPLGWVKPTPAEWV
                     ALLSIGLLGGTAHILLTESYRYASASLLAPFDYTSMVWALVLGYAFFGEVPTTMIVLG
                     SAIIAAAGMFVIWREHQLTLARRREPAGPRVVGAGTATRLRTP"
     gene            complement(3401..3646)
                     /locus_tag="VNY79_06130"
     CDS             complement(3401..3646)
                     /locus_tag="VNY79_06130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lrp/AsnC ligand binding domain-containing
                     protein"
                     /protein_id="HWX72057.1"
                     /translation="MVPFFVQIKCQLGKSYEVANRLADAEIASEIYSTAGDFDLLVKF
                     YVDQGIDIGHFIAEKVQTVPGVQDTRTIITFKAFGAS"
     gene            3748..4419
                     /gene="thiE"
                     /locus_tag="VNY79_06135"
     CDS             3748..4419
                     /gene="thiE"
                     /locus_tag="VNY79_06135"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004789 - thiamine-phosphate
                     diphosphorylase activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HWX72058.1"
                     /translation="MRNVKPVDLRLNAIVDPERAGGHDLAGLARRVVEGGATLVQLRD
                     KRSDTRAMVGTARAIKAALAPSGVPFVVNDRVDVALAAGADGVHLGPEDMAVDDARRL
                     LGPDAIIGLSIKSVEAAAAAPVDLIDYAGIGGVYATLSKQQKSAPIGPDGFARVAGAL
                     RRRAPALPFCGIAGIDAGNAGAVIAAGADGVAVISALSLTPDPAAAARGLREIVDAML
                     AKRGT"
     gene            complement(4431..>4683)
                     /locus_tag="VNY79_06140"
     CDS             complement(4431..>4683)
                     /locus_tag="VNY79_06140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HWX72059.1"
                     /translation="QDAFNGLKAGSAKAAEGLQASCPAQTPTTPLARLDAVGTRLKAM
                     LTAMHTVRPKLQQFYASLSDEQKARFDTMGPPPTASAQQ"
BASE COUNT          750 a         1522 c         1529 g          882 t
ORIGIN      
        1 ggccgtgccg ccgctgacgc caatcccacc gacgtgcatt ttgtcggcgg tcatgagcgg
       61 cagcccgccg gcaaacgcga tgattcccgg aacctgggca atccccggta ccgcgccgcc
      121 cttgagatcc ttgccgtagg cgagttcttg cacgaaacgc gtcgggaacg ggaatcgcgc
      181 cgaggtctgc gccttgtgaa gagcgatgtc gcggctgccg aggtaggcgc catccatttt
      241 ttcgaagaag atctcgttgg cgccgctgtc gactaccgag atgttcattt tccagttctg
      301 ctctttcgac ttggcctcgc aagcggccgc catcttcttt gctgtgtcca gcgagagcgc
      361 attggcagct ggactccagc acagggcgag tgccgtcgcg attgcggccg aatacatcac
      421 agatgatttc attgctttcc tccaacgttc gttgaccaag cccctgttga cgaaccgagt
      481 gcttagcaga cctctgcctt cgccgcgaga ggcgtcctgc cagcagtact ctatcgatat
      541 gtcaattagt atacaacgac ggcgaatggc cgcctgcaag ccttccgcac cgatagcggc
      601 gctgcagcaa cgacatggcg aatctcgtat tcgctcgtgc cgacggtctt gcctggaaag
      661 ggccggttcg tgggcgatcc gcgcggcatt ggccggaaaa gcggtgccac aacgcgcggt
      721 ttcgttactt ctccggggcg gggtttgcct gtatgcatcc gctgctcgaa cgggcaaaat
      781 cgatagggag accatgacat gatccgtgca tttttcgccg tggccgcgat cgcgcttggc
      841 gttggtgttg ccctggcgca gcaggacccg attgccgcgc gccgggcgtt gatgaaggcg
      901 aacggcgacg aggccaagat gggcggcgcc atggccaagg gcgaagcgcc gttcgatctc
      961 gccaaggcgc gcaagatgtt tgccacgttc gaggatgcgt cggcgaaggc gccggctctg
     1021 tttccggaca actcgaagac cggcggcgac acggcggcca agccggagat ctgggagaac
     1081 atggacgact tcaaggcgag gctggtcaag ctcggcgccg acgccaaagc ggccggcgag
     1141 agcgtgaagg atctcgattc cttcaaggcg gctttcggca acatcggcaa gaacgactgc
     1201 ggcggctgtc acgagaagta ccgcgtcaag aagagctgac gtcccgtgac catgcggcct
     1261 tcgcgccacc gaaggtttca tccactcgtt ccgcgcaaac ggcgatccgg ctcgctggcg
     1321 ccagccggaa gccgggttta gcgctcgcgc gaggacgggc ggagaaaaca aacattgtaa
     1381 ggaaactgtc gcggcgaatg cgaacggtca cgctcattgc ggcgggcatc ctcgtcgccg
     1441 ccctcgctgt cgtctggttg ctgaccttgc cggcgaccgt tccggcgtcg gcattgcccg
     1501 cgtacacccc caacgtcgac aacggcagga cgatgttcaa cgccggcggc tgcgcgtcct
     1561 gccacgccac gcccgcgggt gagcctgaca agatggatcg tacgcgcctc ggcggcgggc
     1621 tcggcttgaa atccccgttc ggcaccttct acgtgccgaa catctcgccc gaccccagcg
     1681 acggcatcgg cgagtggagc gaagcgaatt tcgttaccgc gctgtggaag ggaacctcgc
     1741 cctggggcaa gaacctcttc cccgcttttc cctacacctc ctatcagaac atggcgctcg
     1801 ccgacatgcg cgacctgttc ggctatctga agacgttgcc tccggtgacg ggccggacgc
     1861 gccggcacga tctcatgttc cccttcaacc tccgtcgcct ggtcggggtg tggaagctcc
     1921 tcttccttca cgacgggacg tttgcgcccg atccgtcgca gtcggcgcag tggaaccgtg
     1981 gcgcctacct ggtgaacggg cccggtcatt gcgccgaatg tcacagcccg cgcaatttcc
     2041 ttggcgcgat cgtcgaaagc caacgctttg ctggcgggcc gagcccggac ggcaagagct
     2101 tcgtgccgaa catcacgccg gtcgggctgc agcattggtc gaaggacgac atcgcctggt
     2161 cgcaaagcga catcgcgacc ttcctcgaga gcggtatgga cccgtccggt gactatgccg
     2221 gcgatgtgat ggccgaagtg atccgcaaca tatctctcct cgatacggcg gaccgcgccg
     2281 cgatcgccgc ctacatcgtc tcgctgccgc cgcggcaagg gccgaaaccg ccgccgaaga
     2341 agaaataatt ggcttacgca cacgaatcac gacaccaggg ttgacttggt ccgacttggg
     2401 gtccgacttg ggtccgctcc ggggacagcg ggttctcccg ttgggaacca ccgccctatt
     2461 cccatgcata gcggcaaagg cattctcctc aagctgattt cggcggtgct gttcaccgtg
     2521 atgtcggcac tcattcgcta tctcggcgtc gattatccga ccgggcaggt gatcttcttc
     2581 cgctccgcct tcgcgatcct gccggtggtg atcgtttacg cttggcgcgg cgagctcatg
     2641 gcgtcgctgc gcaccgaacg tccgctcggt caggcgggcc gcggcgcatt ggcgatcgtc
     2701 gccatgttct tcaatttcgg agcgctggcg cggctgccgt tgatcgaagc gaacgcgatc
     2761 tccttcacca cgccgctgat ctgcgtggcg ctcgccgcgc tgctgctcaa ggagcgcgtg
     2821 cgcatctatc gctggtcggc ggtcaccgtc ggctttttcg gcgtgctcgt ggtgctcgcc
     2881 ccgcacttca gcggcgagga gttacgcatc gtggtcgcca gcgccgccag cgtcgccggc
     2941 gtggtccttg cgcttgccgg ctccgtcttg aacgccggtg ccgtgatcca gacccgctgg
     3001 ctggcgcgga gcgagagcac ctcttcgatc gtgttctact tctcgctgat ctgcgctgtc
     3061 gccggcctgg cgacctggcc gctcggatgg gtgaagccga cgcccgcgga atgggtcgcg
     3121 ctcctgagca tcggtcttct cggcggcacc gcgcatatcc tcttgaccga aagctatcgc
     3181 tacgcctcgg cctcgctgct ggcgccgttc gactatacct cgatggtatg ggcgctggtg
     3241 ttgggctacg cgttcttcgg cgaggtgccg acgaccatga tcgtgctcgg ttcggcgatc
     3301 atcgcggcgg cgggcatgtt cgtgatctgg cgcgagcatc aactcacttt ggcgcgaaga
     3361 cgcgagcccg ccgggccgcg cgtggtcggc gccggcactg ctacgaggct ccgaacgcct
     3421 tgaaggtgat gatggtgcgg gtgtcctgca cgccgggcac ggtctgcacc ttctcggcga
     3481 tgaaatggcc gatgtcgatt ccctgatcga catagaactt caccagcaga tcgaagtcgc
     3541 cggcggtcga atagatttcc gaggcgatct cggcgtcggc gagcctgttg gcgacttcat
     3601 aggacttgcc gagctggcac ttgatctgca cgaagaaggg gaccatgcgc acctccgaaa
     3661 ccgtcgcatg gggaccttat atcaagccgg ccgcgccgtc atttcgagcc ggtccaccgg
     3721 tgccgcggag gggaaaggtg cgggagcatg cgcaacgtga agccggtcga ccttcgcctc
     3781 aacgccatcg tcgatcccga gcgcgccggc gggcacgacc tcgccgggct cgcacggcgt
     3841 gttgtcgagg gcggcgcaac gctggtgcaa ttgcgcgaca agcgcagcga cacccgggcc
     3901 atggtcggga cggcgcgggc gatcaaggcg gcgcttgcgc cgtccggcgt gcccttcgtg
     3961 gtcaacgacc gcgtcgacgt cgcgctcgct gcgggcgccg atggcgtgca tctcgggccg
     4021 gaagacatgg cggtcgacga tgcccgccgc ctgctcgggc cggacgcgat catcggtctg
     4081 tccatcaaaa gcgtggaagc ggccgcggcg gcgccggtcg acctcatcga ttacgccggc
     4141 atcggcggcg tttatgcgac gctgtcgaag cagcagaaga gtgcgccgat cggtcccgat
     4201 ggattcgcgc gcgttgccgg cgcgctgcga cgccgcgcgc cggccttgcc gttctgcggg
     4261 atcgccggca tcgacgccgg caatgccggc gcggtcatcg ccgccggcgc agacggcgtc
     4321 gccgtcatct cggcactttc gctgacacct gatccggcgg ccgccgcccg cgggttgcgt
     4381 gagatcgtcg acgccatgct ggcgaagcga ggcacttagc gctgcctcgc ttattgctgc
     4441 gcggaggcgg tcggcggtgg ccccatcgtg tcgaacctcg ccttctgctc gtcgctgagc
     4501 gaagcgtaga attgctgtag cttggggcga accgtgtgca tggccgtcag catcgccttg
     4561 agccgggtcc cgactgcgtc gagacgcgcc aacggtgtcg tcggcgtttg cgccgggcag
     4621 gacgcctgta gcccctccgc agccttcgcg gatcccgcct tgagtccgtt gaaggcatcc
     4681 tgc
//
LOCUS       DATMQB010000201         2007 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_71655, whole genome shotgun sequence.
ACCESSION   DATMQB010000201 DATMQB010000000
VERSION     DATMQB010000201.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2007)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2007)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2007
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_71655"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(176..417)
                     /locus_tag="VNY79_06145"
                     /pseudo
     CDS             complement(176..417)
                     /locus_tag="VNY79_06145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196695.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="FliM/FliN family flagellar motor switch protein"
     gene            490..1278
                     /gene="lipB"
                     /locus_tag="VNY79_06150"
     CDS             490..1278
                     /gene="lipB"
                     /locus_tag="VNY79_06150"
                     /EC_number="2.3.1.181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033819 - lipoyl(octanoyl) transferase
                     activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl(octanoyl) transferase LipB"
                     /protein_id="HWX72060.1"
                     /translation="MVKTRSDLSLGLLPAPGAPPAEWHVAEGLVDYEAALAFMAARAA
                     AIAQGEARELIWLVEHPPLYTAGTSARPQEVIAARFPVYTAGRGGQFTYHGPGQRVGY
                     VMLDLKRRAPDVRRFVTTLEEWIIRTLSAFAVRGERRDDRIGVWVRRPDKGAGAFEDK
                     IAAIGIRVRRWVTLHGFALNVAPDLSHFSGIVPCGIAEPRYGITSLADLGRQVAMAEV
                     DHALRTEFEPLFGATADADAHTVASTENSSPRRRSAKSSERAAR"
     gene            complement(1203..1499)
                     /locus_tag="VNY79_06155"
     CDS             complement(1203..1499)
                     /locus_tag="VNY79_06155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HWX72061.1"
                     /translation="MDVIVRVVIRGRVQGIGYRVWTEITALEHGLEGWVRNCRDGSVE
                     ALFAGPKEVVLAMIELCRQGPPGARIDHLDQRAARSEDLALRRRGELFSVLATV"
     gene            complement(1490..>2007)
                     /locus_tag="VNY79_06160"
     CDS             complement(1490..>2007)
                     /locus_tag="VNY79_06160"
                     /inference="COORDINATES: protein motif:HMM:NF017868.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase family protein"
                     /protein_id="HWX72062.1"
                     /translation="AVGGDAAEQRGAFGLMLHFAYGSNMHRAVMRKYAPHAQPLGIAA
                     LADFRFVITADGYASVVPRRGETVHGVLWRLTPRDRVTLDAWEGITAGRYRAAALPIG
                     CAGSCRPALVYMARPLSAGRAKAGYMELVIAAAQEWKLPADYISSLQRWLPRRPSGGI
                     GRRERGEFRWT"
BASE COUNT          315 a          706 c          671 g          315 t
ORIGIN      
        1 acctccacgg gtcgccccgc tagcacctca agctagtgcg tctaccaatt ccgccacgac
       61 cgcatgtggg gtgagcgcgc cttggacggc gtgcgctgcg gatttaacaa atcggctgtt
      121 tacggacaag gcccggcggg caacgcagtg ccgtcatgcg ggactgtggt gggtttcaac
      181 atgcgcccgg cgcgcgcggc agaagttcct tcaccgaccg cgatgcggtt gccgctgacg
      241 atgacggtgc cctcggccac cggcaggttg ttggcgagga tgccggacct cgtccggctc
      301 ggaggaatcg agttcgacgt tggcgccgcg gcccagctgc ggcacttggt ggatcggcat
      361 cgaggtcttg cccagaacca ccgcgagatc gatccagaca ttttccagcg ttgccaaggg
      421 ctcctcgcgc gattttgcga tgcaggttcg ggccgatgcg gtatcctttg accacggtat
      481 ggtcatcagg tggttaagac gcgcagcgat ctgagcctcg gactcctccc cgctcccggc
      541 gcgccgccgg ccgagtggca tgtcgccgaa ggcctcgtgg actatgaagc cgcgctcgcc
      601 ttcatggcgg cccgcgccgc ggcgattgcg caaggagaag cgcgtgagct catttggctc
      661 gtcgagcacc cgcccctcta caccgcgggg acgtcggcgc ggccgcagga ggtgatcgcg
      721 gcgcgttttc ccgtctacac agccgggcgc ggcgggcagt tcacctatca cggtcctggc
      781 cagcgcgtcg gctatgtcat gctcgacctc aagcgccgcg ccccggacgt ccgccgcttc
      841 gtcaccacgc tcgaggaatg gatcatccgc acgctctcag ccttcgcggt gcgcggcgag
      901 cgccgcgatg accgcatcgg cgtgtgggtg cggcgcccgg acaagggcgc aggcgccttc
      961 gaagacaaga tcgccgcgat cggcatccgc gtgcggcgct gggtgacgct gcacggcttc
     1021 gcgctcaacg tcgcgccgga cttgtcgcat ttctctggca tcgtgccgtg cgggattgcc
     1081 gagccgcgct acggcatcac ctcgctcgcc gatctcggcc ggcaagtcgc gatggccgag
     1141 gtcgaccacg ccctgcggac cgaattcgag ccgctgttcg gcgccaccgc cgacgccgac
     1201 gctcacaccg tggcgagcac cgagaacagc tcgccgcgac ggcgcagcgc caagtcctcg
     1261 gagcgcgccg cgcgctgatc gaggtggtcg atgcgcgcgc cgggcgggcc ctgccggcac
     1321 aattcgatca tggcgagcac gacctccttc ggccccgcaa acaatgcctc gaccgagccg
     1381 tcgcggcagt tgcgcaccca gccttcgagg ccgtgttcga gcgcggtgat ttcggtccag
     1441 acgcgatagc cgatgccctg cacgcggccg cggatgacga cgcggacgat cacgtccatc
     1501 gaaattcccc acgctcgcgc cgccctatgc cgccggatgg acgccgcggc agccatcgct
     1561 gcagggatga aatgtagtct gccggcaatt tccactcctg cgccgccgcg atcacaagct
     1621 ccatatagcc ggccttcgcc cggcccgcag agagcggccg cgccatgtag acgagcgccg
     1681 gccggcacga gccggcacag ccgatcggca aagcagcggc gcgatagcgc cccgcggtta
     1741 ttccctccca ggcgtcgagc gtgacgcggt cgcgcggcgt gagccgccac agcacgccat
     1801 ggaccgtttc gccgcgcctc ggcacgaccg aggcgtagcc gtccgcggtg atgacgaagc
     1861 gaaaatcggc gagcgcggcg atgccgagag gctgcgcatg cggcgcatat ttgcgcatga
     1921 cggcgcggtg catgttcgat ccataggcga aatgcagcat cagcccgaag gctccgcgct
     1981 gctcggccgc gtcgccgccc acagcgt
//
LOCUS       DATMQB010000202         6050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1311775, whole genome shotgun sequence.
ACCESSION   DATMQB010000202 DATMQB010000000
VERSION     DATMQB010000202.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6050
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1311775"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(252..833)
                     /locus_tag="VNY79_06165"
     CDS             complement(252..833)
                     /locus_tag="VNY79_06165"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013756.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HWX72063.1"
                     /translation="MNEHDGLQEMTGSAPTSSVDDPQGDAVTDERFRRVMASFATGVT
                     VITTQLRGELRGMTANAFMSGSLEPPLCVVSVGLKARMHAFLLEAGHFGVNILARGQE
                     SLIGHFSGRPVDGMNLKYEYIDGTPLLVDAHATIAAKVVARHSCGDHSLFVGHIFALR
                     QPDSATPIVLHVGRLALLKHLHEQTPAPILDFW"
     gene            complement(923..1948)
                     /locus_tag="VNY79_06170"
     CDS             complement(923..1948)
                     /locus_tag="VNY79_06170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007759303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HWX72064.1"
                     /translation="MRIDAYTHFFPKKFFDMLGEVAADYPDMGKRVRSLPALYDLDVR
                     KKIVDGHKDYQQILAYPQPPIEKFAKTGADIDAFCRVINDGFAELVAKEKDHFPGWVA
                     HVSLAAPDAGVAEAERAIKELGALGVQIYTNVAGKPLDRPEYLPFWNKMNEIGAPVWL
                     HPARGAEMPDYIDEDRSLYEMWWTFGWSYETACAMARLVFAKIIDTHPNLKIITHHFG
                     GIVPMLEGRLGPGNDVLGSRTTEADYVSLRKSLKKRVLDYFKQDFWADTAVFTAEPAT
                     RAGMDFFPRAKIVFASDCPFDPEGGTMYPRETLRILESLDLSKADRDKIFFRNLEAVT
                     GRRLVKS"
     gene            complement(2064..2483)
                     /locus_tag="VNY79_06175"
     CDS             complement(2064..2483)
                     /locus_tag="VNY79_06175"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HWX72065.1"
                     /translation="MLTSTRSTRIEWCHCDPLGIIFYPRYYEMFDISTTVLIEHALGL
                     SKAEYLKAYDFAGHPLVETRARFRTPTRFGDKIEIATALVDCGRSSFKIEHRITKAGA
                     LAVEGFETRVWVVRDPHDPARMKSQPIPPAVLARFKM"
     gene            complement(2606..3367)
                     /locus_tag="VNY79_06180"
     CDS             complement(2606..3367)
                     /locus_tag="VNY79_06180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HWX72066.1"
                     /translation="MDIRGHAALVTGGGSGLGAATARMLAQAGAKVALLDVNQKVAAD
                     TAIDINGIAIHCDVADSASTEAAIAKAAADHGPARILINCAGIGTAKRIVGRDGPMAL
                     ADFDRVVRVNLIGTFNAMRLAAVAMSKLDPLTDDERGVIVCTASVAAYDGQIGQAAYA
                     SSKGGVVALVLPAAREFAQFGIRVNAIAPGIFDTPMLQGLSEPARESLAASLPFPKKL
                     GDPAQFAALARHMIENRYLNGEVVRLDASLRMAPK"
     gene            complement(3370..5280)
                     /locus_tag="VNY79_06185"
     CDS             complement(3370..5280)
                     /locus_tag="VNY79_06185"
                     /inference="COORDINATES: protein motif:HMM:NF009232.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="feruloyl-CoA synthase"
                     /protein_id="HWX72067.1"
                     /translation="MSLASARKHAGENRPPLRPVRLGPASVTVERRGDGAILMRSPEP
                     LPPYPETLTERLAQWAKTAPERIFLAQRDPAGGWRTLSYAATFAAVRAIAAALLERDL
                     SPERAVAILSGNDIEHALLGLAAMHVGIPYAPISVPYSLMSQDFKKLTAIIDILTPGL
                     VFATNGVAFARAIAAAVPASVEVVVTTNPPPGPRATHFAELLEARPTAAVDAAHAAVR
                     ADTVAKILFTSGSTGQPKGVINTQRMLCSNQAMVGAALVFVGEEPPVIVDWLPWNHTF
                     GSNHNFNLVLHNGGSLYIDEGKPMPGAIEATVRNLRDVAPTVYFNVPKGYEMLLPHLA
                     ADRPLREKFFSRLKVLFYAGASLSQHVLDALQALAIETTGERIIFLSSLGSTETAPLA
                     IACSWDTERVGNIGLPAPGVELKLVPREGKLEARLKGPNITPGYWRALALTADAFDEE
                     GFYKIGDAFKFADPAEPAKGLLFDGRLAEDFKLATGTWVSVGPLRAAFIAHCAPLARD
                     VVFAGADRDEIAALVFPDLDACRKLVPDLPADAAAATVLADARIVAAFARLLEALAEP
                     RRGTSARVCRVILLAEPPSLDIGETTDKGSINQRAVLARRAALVEQLYADPPPASVIV
                     AGRSGMAAAQGS"
     gene            5473..>6050
                     /locus_tag="VNY79_06190"
     CDS             5473..>6050
                     /locus_tag="VNY79_06190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008971144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl synthase N-terminal-like
                     domain-containing protein"
                     /protein_id="HWX72068.1"
                     /translation="MRDVFICDAVRTPIGRYGGALAKVRTDDLAAAPIKALIARNAKA
                     DWSRLDEVFFGCANQAGEDNRNVARMALLLAGLPETVPGLTVNRLCASGLNAVGDAAR
                     AIRTGEMDFAIAGGVESMTRAPFVTGKASEPFARTVETYDTTLGWRFVNPAMKARYGI
                     DSMAETGENVAEEYQVARKDQDAFALRSQQRAA"
BASE COUNT         1032 a         1945 c         2081 g          992 t
ORIGIN      
        1 gtccggcaac gccgaccgct tcaagggctt cgccgaggac tgcatggcgg aatatgatct
       61 cgacggctgg aaggtcccgg acctcaccga tcccggcgaa ctcagctatc atgtcatgcg
      121 cggcgccgga cggtaggccg aggccgaacg caccgatttt cgtcggctga tttccgcgtc
      181 ggcacggcca cggcggtcgc ggccatgccg attgggcgga tcgcgctttc aatcaacaga
      241 aatcgcttcc ctcaccagaa atccaggatc ggggccggtg tttgctcgtg cagatgcttg
      301 agcaaggcca atcggccgac atgcagcacg atcggagtgg cgctatcggg ctgccgcaac
      361 gcgaagatgt ggccgacgaa cagcgaatgg tcgccgcaag agtggcgcgc gaccaccttg
      421 gcggcgatcg tcgcgtgcgc atcgaccaac agcggcgtgc cgtcgatgta ttcgtatttc
      481 aggttcatgc catcgaccgg ccggccggaa aagtgcccaa tcagagactc ctggccgcgg
      541 gcaagaatgt tgacgccgaa atggccggcc tccagcagga aggcgtgcat gcgcgccttc
      601 agaccgaccg agaccacgca cagcggcggc tcgagcgatc ccgacataaa ggcattcgcg
      661 gtcatgccgc gcagctcgcc gcgcagctgc gtggtgatga cggtgacgcc ggtggcgaac
      721 gaggccatga cgcggcgaaa acgttcatca gtcaccgcat cgccctgcgg atcgtccacg
      781 ctggaagtag gcgccgagcc ggtcatctcc tgtagcccat cgtgctcatt cattggtctg
      841 ccacgcgaaa tagcgaatag cgattggaaa gaccaccccc cattcgctca ccgccattcg
      901 ccaattcacc atgccaaggg cgtcacgact tgaccaggcg gcggccggtg acggcttcga
      961 ggttcctgaa gaaaatcttg tcgcgatccg ctttcgacag gtcaagcgat tcgagaatgc
     1021 gcagcgtctc gcgcggatac atcgtcccgc cctcgggatc gaacgggcaa tcggaggcga
     1081 acacgatctt ggcgcgcggg aagaagtcca tgccggccct ggtcgccggc tcggcggtga
     1141 acacggcggt atcggcccag aaatcctgct tgaaatagtc gagcacgcgt tttttcaggc
     1201 tcttgcgcag cgacacgtag tcggcctccg tggtgcgtga accgagcacg tcattgcccg
     1261 gcccgagccg gccttcgagc atcggcacga tgccgccgaa atggtgggtg atgatcttca
     1321 ggttcggatg ggtgtcgatg atcttcgcga acacgaggcg cgccatggcg caggcggtct
     1381 cgtaggacca gccgaaggtc caccacattt cgtagagcga tctgtcctcg tcgatgtagt
     1441 ccggcatttc ggcgccgcgt gccggatgca gccagaccgg cgcgccgatc tcgttcatct
     1501 tgttccagaa cggcagatat tccgggcgat cgagcggctt gccggcgacg ttggtgtaga
     1561 tctgcacgcc gagcgcgcca agctctttga tcgcgcgctc cgcctcggcg acgccggcat
     1621 cgggcgccgc aagcgaaacg tgcgccaccc agccggggaa gtgatccttc tccttggcga
     1681 caagctcggc gaagccgtcg ttgatgacgc ggcagaacgc gtcgatatcc gcgccggtct
     1741 tggcaaattt ctcgatcggc ggctgcgggt aggcgaggat ctgctggtag tccttatggc
     1801 cgtcgacgat cttcttgcgc acgtcgaggt cgtagagcgc cggaagcgaa cgcacgcgct
     1861 tgcccatatc cgggtagtcg gcggccactt cgccgagcat gtcgaagaat ttcttcggga
     1921 aaaagtgcgt gtacgcatcg atacgcatgg acgttgctcc ccggactacg tctttcctct
     1981 caactcggcg ccgcaacggc ggaacttgtt ggcgccggcc tgccgtcggt gcgacaggcg
     2041 cgctgtcgga cgggcgagtc ctgtcacatc ttgaaacgcg cgagcaccgc cggcggtatc
     2101 ggctgcgact tcatgcgcgc cggatcgtgc ggatcgcgca ccacccacac gcgcgtctcg
     2161 aaaccttcga ccgcgagcgc tccggccttg gttatgcggt gctcgatctt gaaactcgag
     2221 cgcccgcagt cgaccagcgc ggtggcgatc tcgatcttgt ccccgaaccg cgtcggcgtg
     2281 cggaaacgcg cccgcgtctc gaccagagga tgcccggcga aatcgtaggc tttgaggtat
     2341 tcggccttgc tcagcccgag cgcatgctcg atcagaaccg tcgtcgagat gtcgaacatt
     2401 tcatagtaac gcggatagaa gatgatcccg aggggatcgc agtggcacca ttcgatgcgc
     2461 gtgcttcggg tgctggtcaa catgccgcga cctgttccct ccccccttgt gggggagggt
     2521 agggaggggg gtcgggagga ggcgcgagag cgccgatgcg agcgcaagac cccgggaccc
     2581 cctactgcaa ggggtagggt caagtttatt tcggcgccat gcgcagtgag gcgtcgaggc
     2641 ggacgacctc gccgttgagg tagcggttct cgatcatatg gcgcgccagg gcggcgaact
     2701 gcgccgggtc gccgagcttt ttcgggaacg gcagcgaagc cgcaaggctt tcccgcgccg
     2761 gctcggagag gccctgcagc atcggcgtgt cgaagatgcc gggcgcgata gcgttgacgc
     2821 ggatgccgaa ctgggcgaat tcgcgcgccg cgggcagcac gagcgcgacg acgccgccct
     2881 tcgacgaggc gtaggcggcc tggccgatct gcccgtcata ggccgcgacc gaggcggtgc
     2941 acacgatgac gccgcgctcg tcgtcggtga gcggatcgag cttgctcatc gcgaccgccg
     3001 cgagccgcat cgcgttgaac gtgccgatca ggttgacgcg caccacgcgg tcgaaatcgg
     3061 caagcgccat cggcccgtcg cggccgacga tgcgctttgc cgtgccgatg ccggcgcagt
     3121 tgatgaggat gcgcgccggg ccgtggtcgg cggcggcctt ggcgatcgcc gcctcggtgc
     3181 tggcgctgtc ggcgacgtcg cagtgaatgg cgatgccgtt gatgtcgatc gcggtgtcgg
     3241 cggcgacctt ctggttgacg tcgagcaggg ctaccttcgc tccggcctga gccagcatgc
     3301 gcgcggtggc ggcgccaagg ccggagcctc cgccggtaac gagtgctgcg tgtccgcgaa
     3361 tatccatgat caactccctt gcgctgcggc catgcccgag cgacccgcga cgatgacgct
     3421 tgccggcggc gggtcggcgt aaagctgttc gaccaaggcg gcgcggcggg cgagcaccgc
     3481 gcgctggttg atcgatcctt tgtcggtggt ctcgccgatg tcgagcgagg gcggttcggc
     3541 gagcagaatg acgcggcaga cgcgcgcgga cgtgccacgg cggggctccg ccagcgcctc
     3601 gaggagccgc gcgaacgcgg caacgatacg cgcgtcggcg agcacggttg cggcggcagc
     3661 atcggcaggg agatcgggaa cgagcttgcg gcaggcatcg agatcgggaa agaccagggc
     3721 ggcgatttcg tcgcgatcgg caccggcgaa caccacgtcg cgcgcgagcg gcgcgcaatg
     3781 ggcgatgaac gccgcgcgca acggcccgac gctgacccag gtgccggtcg cgagcttgaa
     3841 gtcctcggcc aggcgtccgt cgaacaacag gccctttgcc ggctccgccg gatcggcgaa
     3901 cttgaacgcg tcgccgatct tgtaaaagcc ctcctcgtcg aaggcgtcgg cggtgagcgc
     3961 cagcgcgcgc caatagccgg gggtgatatt cggacccttg agccttgctt cgagcttgcc
     4021 ttccctcggg acgagcttga gctcgacccc gggcgccggc aaaccgatat tgccgacgcg
     4081 ctcggtgtcc cagctgcagg cgatcgccag cggcgccgtt tcggtcgagc cgaggctcga
     4141 caggaagatg atgcgctcgc ccgtggtctc gatcgcgagc gcctgcagcg cgtcgaggac
     4201 atgctgggag aggctcgcgc cggcgtagaa gagcaccttg agccggctga agaatttttc
     4261 gcgcagcggc cggtcggcgg caagatgcgg cagcagcatc tcgtagccct tgggcacgtt
     4321 gaaatagacc gtcggcgcga cgtcgcgcag gttgcgcacg gtcgcctcga tcgcgccggg
     4381 catcggcttg ccctcgtcga tgtaaagcga gccgccgttg tgcagcacca gattgaagtt
     4441 gtggttgctg ccgaaggtgt gattccaggg cagccagtcg acgatcaccg gcggctcctc
     4501 gccgacgaac accagcgccg cgcccaccat cgcctggttc gagcacagca tgcgctgggt
     4561 gttgatcacg cccttcggct gcccggtcga gccggaggtg aacaggattt ttgcgaccgt
     4621 atcggcccgg accgcggcgt gcgccgcatc gacggcggcg gtcggccgcg cctccagtaa
     4681 ttcggcaaaa tgcgtcgccc gaggtccggg cggcggattt gtcgtgacca cgacttccac
     4741 ggaggccggc actgcggcgg cgatggcgcg ggcgaatgcc actccgttcg tggcaaagac
     4801 gaggcccggc gtcagaatat cgatgatcgc ggtgagcttc ttgaagtcct gcgacatcag
     4861 cgaataggga acggagatcg gcgcataggg aatgccgaca tgcatggcgg caaggccgag
     4921 cagtgcgtgc tcgatgtcgt tgccggacag gatcgcgacc gcccgctcgg gcgacaaatc
     4981 gcgctcaagc agcgccgccg cgatcgcgcg cactgcggcg aatgtcgccg catagctcaa
     5041 ggtccgccag ccgccggcgg ggtcacgctg cgccaggaag atccgctcag gcgcagtctt
     5101 cgcccattgg gcgagacgct ccgtaagcgt ttccgggtaa ggcggcagcg gctctggcga
     5161 gcgcatcagg atagcgccat caccgcggcg ctcgactgtc acgctggccg ggccgagccg
     5221 gaccggccgc agcggcggcc ggttttcccc ggcgtgtttc ctggcggagg cgagcgacat
     5281 cgtatcagat cagaaccggt gcttggttcg cgtgacattt ccgcggaacc gcgtcaagac
     5341 gcgcgatcgg accggccggg cggcccccgc ggcgccgcga tttgaccctg tcggccatgg
     5401 ctcctaaata gcgcgcagcc ggcactggcg tgcgtattcg agcaaaagcc ggcggccgca
     5461 agggagagag cgatgcgcga cgtcttcatc tgcgatgccg tacgcacccc gatcggccgc
     5521 tacggcggcg cgctcgccaa ggtgcgcacc gacgacctcg cggccgcgcc gatcaaggcg
     5581 ctcatcgccc gcaacgccaa ggccgactgg tcgcggctcg acgaagtgtt cttcggctgc
     5641 gccaatcagg ccggcgagga caaccgcaac gtcgcgcgca tggcactcct gctcgccggg
     5701 ctgccggaga cggtccccgg tctcaccgtc aaccggctgt gcgcctcggg cctcaacgcc
     5761 gttggcgatg cggcgcgcgc catccgcacc ggcgagatgg atttcgccat cgccggcggg
     5821 gtcgagtcga tgacgcgggc gccgttcgtc accggcaagg cgagcgagcc gtttgcgcgc
     5881 acggtcgaga cctacgacac cacgctcggc tggcgcttcg tcaatccggc gatgaaggcg
     5941 cgctacggca tcgattcgat ggccgagacc ggcgagaacg tcgccgagga atatcaggtg
     6001 gcgcgcaagg accaggatgc gttcgcgctg cgctcgcagc agcgcgccgc
//
LOCUS       DATMQB010000203         8704 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_686381, whole genome shotgun sequence.
ACCESSION   DATMQB010000203 DATMQB010000000
VERSION     DATMQB010000203.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8704)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8704)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8704
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_686381"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1125
                     /locus_tag="VNY79_06195"
     CDS             <1..1125
                     /locus_tag="VNY79_06195"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX72069.1"
                     /translation="PKLRERALKAERDRNVPRESVEEYIEAGLIHTLQPKRWGGYEHD
                     HEVAFDIAIELGKSTCASSAWVLNYFADHACILAHFPDEAQHDVWSENNAACIATSAA
                     PTGKVSIAPGGYRLDGRWSWCSGLAHSQWIMIGGLIFREGEDHPDMRLFLVPVSQVKQ
                     DDTWYCAGLRASGSTTSVLDNVFVPEHRTVSFSTLRDACSPGSKINTNPIYRTPFIAV
                     HSYALLGPALGAARGGYGDFVQWTRQRYLTYTQLTIAQHVPVQLKVAEISAQIDAVEL
                     LARRALATARKDYTGMSMETRTVLRRDFTYAMRLLREAMDSLIKVSGSSGLMDDNSAQ
                     RCWRDVHAISSHVVMNWDVPAENFGRTEFGLPLNPAYPMF"
     gene            complement(1129..1785)
                     /locus_tag="VNY79_06200"
     CDS             complement(1129..1785)
                     /locus_tag="VNY79_06200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018065867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HWX72070.1"
                     /translation="MTSGKEDEEFFRQRGFGIKMGFGERPALIVIDMVKGFTDPAMPL
                     GADLDSQIAAQKPLLEVAHERAIPVLFSTVIYEEADIKDAGIWALKQTGPRTLTAGSE
                     AVKVDPRLGMRPTDILLVKKYASCFFGTDLVPRLNSRRVDTLIITGCTTSGCVRATAV
                     DAVQNGFRPMVVREAVGDRSVAAHEQSLFDLNAKYADVVSLEETLHYLKTVGHNRPAA
                     "
     gene            complement(1852..2655)
                     /locus_tag="VNY79_06205"
     CDS             complement(1852..2655)
                     /locus_tag="VNY79_06205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HWX72071.1"
                     /translation="MAYTDILYDVDNLIATITLNRPDKLNAWTSEMDKEVRHAVEAAA
                     ADGNVRAIVLTGAGRGFCAGADMSRLSKVAAEGRPSGNGSQAGRNSGNFAQKFSYLLA
                     VPKPIFAAINGPIAGIAVCLVLFCDFRYMAEGARLTTAFAKRGLIAEHGSSWMLPRLI
                     GPMNALDLLYSARMVEAAEAERLGLVRQLPVDNFLRRVQGIAHDLVTASSPRSIGVIK
                     RQVFESYFQSLAEAWETADIEMTRSFGSEDFKEGVAHFIEKRPAAFTGR"
     gene            2814..3605
                     /locus_tag="VNY79_06210"
     CDS             2814..3605
                     /locus_tag="VNY79_06210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HWX72072.1"
                     /translation="MSGVLIEALEDGLLTLTLNLPERRNALDTAMLESLVDATRRAAT
                     NPAVSAVMLTGAGGTFCVGGDVKAMAARGNETTLTDERIADLRGKMEAARLLHEMRKP
                     TIAAIEGAAAGAGLSLALACDLRIANRSAKLTTAFAKVALSGDFGGTYFLTKLLGSAK
                     ARELYLTSPILSADEALRIGLVTRVVDDAGFQETAKAYAMTIARGPRLTLGYIKHNLN
                     LAEHAPLETCFDNEAINHVRAAATEDHREAAAAFVEKRPPVFKGR"
     gene            3638..4408
                     /locus_tag="VNY79_06215"
     CDS             3638..4408
                     /locus_tag="VNY79_06215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72073.1"
                     /translation="MADYFRLRQICLVANDLPRVIGDMEAIFGVKLAYQDPHVRQYGL
                     ENALFPFGLAFVEVVSPVEANTAAGRFLERSNGVGGYMAIFNSSDAERRGRHANAMGV
                     RTAHTIDHPGFRAVQLHPRDCRAAMIEFDRSDGEEDLRGPYHPAGGSGWTKAISTEVT
                     RRLIEIGIESPNPADIGQHWSRILEKPFGPDGGGGRIAVDMTAIRFAKGEDSREVLRT
                     LAIEVADRAGIEQRASKRGYSVTAAGVEFCGVRFQLVS"
     gene            4450..4812
                     /locus_tag="VNY79_06220"
     CDS             4450..4812
                     /locus_tag="VNY79_06220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72074.1"
                     /translation="MDDRADQIARNFISRYEAEWSNGAEAVSRLYAADGVLVGFVTAV
                     GRSQICELLRGIIGQGWTSIKIKIVNVRPIGGVILIASEYAAIGSGENAGKTLNAASS
                     YVLVESNGDWLSTLHTAR"
     gene            5626..7011
                     /locus_tag="VNY79_06225"
     CDS             5626..7011
                     /locus_tag="VNY79_06225"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HWX72075.1"
                     /translation="MSVIDTTEAPVLAAPRRPEGRVSLRQFLQVIRDNVLATYAPEDF
                     DKDFIARRLLWRRTFVVNEPGGVRHVLLDNAQNYRKSELSRRILEPGLGRGLITTDGE
                     LWRRHRRIMAPAFDPRSVAGYAPVMTEVTEEMLARWDALPEHSVVDVAVAMMHTTLHI
                     ISRAMFSSDSDEIVDVVERGVSEYQTTVRPSLLDLLHVPEWLTALISPRMADGILDEF
                     DASVDRLLTERGRAPDAEPKDLLARLIAARDTETGGGMTAQEVRDQVVTIFMAGHETT
                     AQALAWTWYLVSHHPAAEAKLHEELAGVLGGRTPRNEDLVNLPYTRMVLEEAMRLYPP
                     AHTLGREPIAADEVLGHRIPAGSTVLVVPWMLHRKPSLWERPDRFEPERFSAEQTAAR
                     PRFAYLPFGAGPRICIGAAFAMAEGMLILATIAQRYRLRVKPGHPVEPQGLITIRPRY
                     GLPMILERRQR"
     gene            complement(7395..7973)
                     /locus_tag="VNY79_06230"
     CDS             complement(7395..7973)
                     /locus_tag="VNY79_06230"
                     /inference="COORDINATES: protein motif:HMM:TIGR01470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HWX72076.1"
                     /translation="MSPIARLPVFLALAGKRAMLAGGSSAAAWKAELLSAAGAQVDVY
                     AEEISAELRALADAPPRGSIMLHRRAWIAGDLGTAAVAVGAFADEADAARFAQAAREA
                     GVPVNVIDKPAFCDFAFGAIVNRSPLVIGISTDGAAPVFAQAIRARLEMLLPKGFAAW
                     AAAAQHWRSAVKAAELTFPARCAFWRLFAKHP"
     gene            complement(8084..>8704)
                     /locus_tag="VNY79_06235"
     CDS             complement(8084..>8704)
                     /locus_tag="VNY79_06235"
                     /EC_number="1.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440649.1"
                     /note="Catalyzes the reduction of sulfite to sulfide, an
                     essential step in the anaerobic sulfate-respiration
                     pathway; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite reductase subunit alpha"
                     /protein_id="HWX72077.1"
                     /translation="LKSNPGRVSLTVDAVRYEVDKRTRLGVCSTFLGGRIAPGGRLRV
                     YVQKAQHFALPEDPSKPIIMIGPGTGLAPFRAFLHERHAVNAPGRNWLFFGHQRRDYD
                     FFYEEELVAMRAAGLLTRLTLAWSRDGDEKIYVQHRMREVGRDLWSWLNDGAYIYVCG
                     DALRMAKDVEAALIEIIANHSGRAPAEAVRLLGELKAAGRYQVDVY"
BASE COUNT         1505 a         2845 c         2916 g         1438 t
ORIGIN      
        1 ccgaagctgc gcgagcgcgc gctcaaggcc gagcgcgacc gcaatgttcc gcgggaatcg
       61 gtcgaggaat atatcgaggc tggcctgatc cataccctgc agcccaagcg ctggggcggc
      121 tacgagcacg accacgaagt cgcgttcgac atcgccatcg agctcggcaa gtcgacctgc
      181 gcctcatcgg cctgggtctt gaactatttc gccgatcacg cctgcattct tgcccatttc
      241 ccggacgagg cgcagcacga cgtctggagc gaaaacaacg ccgcctgcat cgccacgtcg
      301 gctgcgccga ccggcaaggt gtcgatcgcg cccggcggct atcgcctcga cggccgctgg
      361 tcatggtgca gcggcctggc gcactcgcaa tggatcatga tcggcgggtt gatcttccgc
      421 gaaggcgagg atcaccccga catgcggctg ttcctcgttc cggtgtccca ggtgaagcag
      481 gacgatacct ggtactgcgc cggcctgcgc gcgtccggct cgacgacgtc tgtgctcgac
      541 aatgtgttcg tgccggagca ccgcacggtc tccttttcga ccttgcgcga cgcctgctct
      601 cccgggtcga agatcaacac caatccgatc taccgcacgc cgttcatcgc cgtgcacagc
      661 tatgcgttgc tcggcccggc gctcggtgcg gcgcgcggcg gctatggcga tttcgtgcaa
      721 tggacgcgcc agcgctacct gacctacaca cagctcacca tcgcccagca cgttccggtg
      781 cagctcaagg tcgccgagat ttccgcgcag atcgacgcgg tggagctcct ggcgcggcgc
      841 gcgctcgcga ccgcccgcaa ggactacacc ggcatgagca tggagacgcg cacggtgctg
      901 cgccgcgact tcacctatgc catgcggctc ctgcgcgagg cgatggactc gctgatcaag
      961 gtcagcggct cgagcgggct gatggacgac aattcggcgc agcgctgctg gcgcgacgtg
     1021 cacgccattt cctcgcacgt ggtgatgaac tgggacgtgc cggcagagaa cttcggccgc
     1081 acggagttcg ggctcccgct caaccccgcc tacccgatgt tctgaccgtc aggccgccgg
     1141 ccggttgtgg ccgacggtct tgagatagtg cagcgtctcc tcgagcgaca cgacgtcggc
     1201 gtatttggcg ttgaggtcga acaggctctg ctcgtgcgcc gcgaccgagc ggtcgccgac
     1261 cgcctcgcgc acgaccatcg ggcggaagcc gttctgcacc gcatcgaccg ccgtcgcccg
     1321 cacgcagccg ctggtggtgc agccggtgat gatcagcgtg tcgacgcggc ggctgttgag
     1381 ccgcggcacg aggtcggtgc cgaagaagca tgaggcatat ttcttcacca gcagaatgtc
     1441 agtcggccgc atgccgaggc ggggatcgac cttgaccgcc tcggaaccgg cggtgagcgt
     1501 gcgcgggccc gtctgcttga gcgcccagat gccggcatcc ttgatatcgg cctcctcgta
     1561 gatgacggtc gagaacagga cgggtatcgc gcgctcgtgg gcgacttcga gcaacggctt
     1621 ctgcgccgcg atctggctgt cgagatcggc accgagcggc atggcggggt cggtgaagcc
     1681 cttgaccatg tcgatgacga tcagtgccgg ccgctcgccg aagcccatct tgatgccgaa
     1741 gccgcgctgc cggaagaact cctcgtcctc tttgccgctg gtcacgatct cgcgctcctg
     1801 atgggccttg ccgcaactca agaaaatcgc cgcaggtttg aggcgcgcga attaccggcc
     1861 cgtaaaggcg gccgggcgct tctcgatgaa atgcgccacc ccttccttga agtcctcgga
     1921 gccgaacgac ctcgtcattt cgatgtcggc cgtttcccac gcctcggcga gagactggaa
     1981 ataggattcg aacacctggc gcttgatgac gccgatcgaa cgcggcgacg acgccgtgac
     2041 cagatcgtgg gcgatgccct gcacgcgcct caggaaatta tccaccggca attgacgcac
     2101 caggccgagc cgctcggcct cggcggcctc gaccatgcgc gccgaataga gcaggtcgag
     2161 cgcgttcatc ggaccgatca ggcgcggcag catccacgag ctgccgtgct ccgcgatcaa
     2221 cccgcgcttg gcgaacgccg tggtcagcct ggcgccctcc gccatgtagc ggaagtcgca
     2281 gaacaggacg aggcagacgg cgatgccggc gatcgggccg ttgatggcgg cgaagatcgg
     2341 cttgggaacg gccagcaggt agctgaattt ctgcgcgaag ttgccgctgt tccggcccgc
     2401 ctgactgccg ttgccgctcg gcctgccctc ggccgctact ttgctgaggc gagacatgtc
     2461 ggcgccggca caaaatccgc gcccggcacc ggtcaacacg atcgcccgca cattgccgtc
     2521 ggccgccgcc gcttcgacgg cgtgacgcac ctccttgtcc atctcgctcg tccacgcatt
     2581 gagcttgtcc gggcgattga gcgtgatggt cgcgatcaga ttatcgacgt cgtacaggat
     2641 atccgtatag gccatgcgtt cctcccacgg ttgcggtgaa tattgcatat tggccaaatc
     2701 tggtccaaga aaacgaacaa gaaaacgcaa caaggaaaag cgccgatgtt gtccggtgcc
     2761 gcgccgatgc ggccttgctc caccggaacc gatcggcgcc tgcggagggc accatgagcg
     2821 gcgtgctcat cgaagcgctc gaagacggcc tcctcacgct cacgctcaat cttccggagc
     2881 gcaggaacgc gctcgacacc gcgatgcttg aatcgctcgt cgacgcgaca cggcgcgccg
     2941 caacgaatcc cgcggtcagc gcggtgatgc tgaccggcgc cggcggcacc ttttgcgtcg
     3001 gcggcgatgt gaaggcgatg gccgcgcgcg gcaacgaaac aacgctgacc gacgagcgga
     3061 tcgcggactt gcgcggcaag atggaagcgg cgcgcctgct gcacgagatg cgcaagccga
     3121 cgatcgctgc gatcgagggc gccgcggcgg gcgccggtct gtcgctcgcg ctcgcctgcg
     3181 acctgcgcat cgccaaccgt tcggccaagc tcaccaccgc cttcgccaag gtcgcactgt
     3241 ccggcgattt cggcggcacc tattttctga ccaagcttct cggcagcgcc aaggcgcgcg
     3301 agctctatct gacctccccg atcctgagcg ccgatgaggc gttgcggatc gggctggtca
     3361 cccgcgtcgt tgacgatgcc ggctttcagg aaaccgccaa agcctatgcc atgacgattg
     3421 cccgcggccc gcggctgacg cttggctaca tcaaacacaa tctcaatctt gccgaacatg
     3481 cgccgctcga gacgtgcttc gacaacgagg cgatcaatca cgtgcgtgcc gcggcgaccg
     3541 aggatcaccg ggaagcggcc gcagcctttg tcgagaagcg cccgcccgtc ttcaaaggac
     3601 gctgacgtga gggacgccga cctgaaagga cgctgatttg gccgactatt tccgcctgcg
     3661 gcagatttgc ctggtggcga acgatctgcc gcgcgtgatc ggcgacatgg aagcgatctt
     3721 cggggtgaag ctcgcctacc aggacccgca cgtgcgccaa tacgggttgg aaaacgcgct
     3781 gtttccgttc gggctcgcct tcgtcgaggt cgtctctccg gtcgaagcca atacggcggc
     3841 cggccgattt ctcgaacgct cgaacggcgt cggcggctac atggcgatct tcaattccag
     3901 cgacgcggaa cggcgcggcc ggcacgccaa tgccatgggg gtacggacgg cgcacacgat
     3961 cgaccatccg ggctttcgcg ccgtgcagct tcacccgcgc gattgccgcg cggcgatgat
     4021 cgagttcgat cgcagcgacg gcgaagaaga cctgcgcggt ccctaccatc cagccggcgg
     4081 aagcggctgg accaaagcga tcagcaccga ggtcacccgg cggctcatcg agatcggcat
     4141 cgagagtcca aacccggccg acattggcca gcattggtcg cggatcctgg agaagccctt
     4201 tgggcccgat ggtgggggcg gccgcatcgc ggtcgacatg actgcgatcc gattcgcgaa
     4261 gggagaagac tcgcgggagg ttttgcgcac gctcgcgatc gaggtcgccg accgcgccgg
     4321 catcgagcag cgggcgtcga agcgtggtta ttcagtcact gctgccggcg tcgaattctg
     4381 cggcgtgcgc ttccagctcg tatcctgagg gcgtgccgct tttcggtgat gaccggccgg
     4441 gaggcgccct tggacgaccg cgcagatcag atagcccgta acttcatcag ccgctacgag
     4501 gctgaatgga gcaacggcgc cgaggccgtc tcgcggctct acgcggccga cggcgtgctc
     4561 gtcggctttg tcacggcggt aggccgttcg cagatatgcg aattgctgcg cggcatcatc
     4621 ggccagggct ggaccagcat caaaatcaag atcgtgaacg tccgcccgat cggcggcgtg
     4681 atcctgatcg ccagcgaata tgcagcgatc ggttctggtg aaaatgccgg aaagaccttg
     4741 aatgccgcgt cgagctacgt gctggttgaa agcaacggcg actggctttc gacgctgcac
     4801 acggcgagat gagttctcgg tttttcggcg ggagcaacgg tgtgaatggc gcaagtttga
     4861 cgccgagagc gcgtctatgc gtgcgcgaag ttattgcgcg cggggctttg ccggaggcgg
     4921 cgctgaggat ggggtcaagg aggtgggagg ccctgcggca ggggcctgcg cggtgggacc
     4981 gggcggggcc gcgacattgg gctgcggctg agccgcggcc attgtcgacg cagcgggctg
     5041 cggccgcgcg ccgacttcgt cgggctcggg atcgcggaag gccttgagaa aaccgacgag
     5101 cgactgctgg agggattcgg cggaggcgcc tgatgtagag gaggaacttg ggcttgccgc
     5161 agcggccggc gccgaggcgg aaacgacgct cggctgcggg gcggcgaatg atgcgggggg
     5221 cggcgtggat gatgccggtg tagcggatga agcagatgaa accgcgggcg aggatagtgt
     5281 tggggaagcg ggtgttgctg cggaagcgga cggcgctgag gaaacggagg acgtggatga
     5341 tgccgggaaa agagaggagg acgaacaggc cgccagcatc ggcatcagcg ccattgcggc
     5401 agccgtggcg ccgaagcgga gagcgccgcc ccggtcggcg atccacaggt caacacctac
     5461 gcgacgccac cccgtcatgg cacaattata ccaagcgctc gcggtcaatc acaaggtgcg
     5521 atcggcaccc cggaagcgtt caccgggaag ccgatcgggt gtatggagaa atctaattcc
     5581 tgccgttctt tgtcgttgac cggcgtatga gcctgagagg cagcgatgag cgtcatcgat
     5641 accacggaag ccccggtcct tgccgccccg cgccggccgg aagggcgcgt gagcctgcgg
     5701 cagttcctgc aggtcatccg cgacaatgta cttgccactt acgcgcccga ggacttcgac
     5761 aaggatttca ttgcccgccg gctgctgtgg cgccgcacct tcgtcgtcaa cgaaccaggc
     5821 ggcgtgcggc atgtgctgct ggacaacgcg cagaactacc ggaagtcgga gctcagccgc
     5881 cgcatcctgg agccggggct cgggcgcggc ttgatcacca ccgatggaga gctgtggcgc
     5941 cgccatcgcc gcatcatggc gcccgccttc gatccgcgca gcgtcgccgg ctacgcgccg
     6001 gtcatgaccg aggtcaccga ggaaatgctg gcgcgatggg acgcgctgcc ggagcacagc
     6061 gtggtcgacg tcgcggtggc gatgatgcac accacgctgc acatcatctc gcgcgcgatg
     6121 ttctcctcgg attccgacga gatcgtcgac gtggtcgagc gcggcgtcag cgaataccag
     6181 accacggtgc ggccgagcct tctcgacctg ctgcacgttc ccgaatggct taccgcgctg
     6241 atctcgccgc gaatggccga cggcatcctc gacgagttcg acgcctcggt cgatcgactg
     6301 ctcaccgagc gcggccgcgc gccggacgcc gagcccaagg atttgctggc gcgcctgatc
     6361 gccgcacgcg acaccgagac cggcggcggc atgacggcac aggaagtgcg cgaccaggtg
     6421 gttaccatct tcatggccgg gcacgagacc acggcgcagg cactggcctg gacctggtat
     6481 ctggtgtcgc accatccggc ggcggaagcg aagttgcacg aggagctggc gggcgtgctc
     6541 ggtgggcgca cgccgcgcaa cgaagatctc gtcaacctcc cctacacccg catggtgctc
     6601 gaggaggcga tgcggctcta tccgccggcc cacactctgg gacgcgagcc gatcgcggct
     6661 gacgaggtgc tggggcatcg catcccggcc ggttccacgg tcctggtcgt accctggatg
     6721 ctccaccgca agccgtcgct gtgggagcgg ccggaccggt tcgagcccga gcggttttca
     6781 gcagagcaaa cggcggcacg accgcgcttc gcctacctgc cgttcggcgc cggcccgcgt
     6841 atctgcatcg gcgcggcgtt cgccatggcc gaaggcatgc tgatcctggc gacgatcgcg
     6901 cagcgctatc gcctgcgtgt caagcccggc catccggtcg agccgcaagg cctgatcaca
     6961 atccggccgc gctatggttt gccgatgatc ctggagcggc ggcaacgctg agcatgccac
     7021 gggttgtcgt gccgtcgcgg gcgcggccgg gtagccgctc ttgagccgca ccacgcgctt
     7081 gccatgcgtc gcgagcccgg ccatcagggt atcgatctct ttcccgtccc cggtggtgcc
     7141 gaacccggct tcgccgacca ggaatttgcg cgcctcgcgg cgtgcgaaat cgagcacctc
     7201 gggggagatg agaccgtcga acacaatcac gtcggccgtt tgcagcgcgc gaaccgcacg
     7261 catcgtaagc aagtccggat cggctggcgc gtcgacgatg atgaccgatc cattctcgac
     7321 gccggctccc tccttttgaa cagcggccat caagcggccg aggtcggccc ccgtcggctc
     7381 gctctcggcg tgcgtcacgg atgcttggcg aacagccgcc agaaggcgca gcgcgcgggg
     7441 aacgtcagct ctgcggcctt gacggccgaa cgccaatgct gcgcggccgc ggcccaggcc
     7501 gcaaagccct tgggcagcag catctccagc cttgcgcgga tggcttgggc gaacacaggc
     7561 gcggcgccgt cggtggaaat tccaatgacc agtggcgaac ggttgacgat cgcgccgaag
     7621 gcgaagtcgc agaaggccgg tttgtcgatg acgttgactg gtacgccggc ctcgcgcgcg
     7681 gcctgcgcga agcgagccgc gtccgcttcg tcggcaaacg cgccgacggc aacggcggcg
     7741 gttccaagat cgcccgcgat ccacgcgcgc cggtgcagca tgatcgagcc gcgcggcgga
     7801 gcgtcggcga gtgcgcgcag ctctgcggaa atttcctcgg catagacgtc gacctgcgca
     7861 ccggccgccg acagcagctc cgccttccag gccgccgcgg aactgccgcc agccagcatc
     7921 gcgcgtttgc cggcgagcgc gaggaagacc ggcaggcgcg cgatcggcga catgcggccc
     7981 ggacgtattt cagcgttcgc gctatgcaca ctcacgagca aatggtctcc cagaggcgcg
     8041 tgatcttttt ggaaagccgg cttccacgtt ttcgcatcac gttctagtag acgtcgacct
     8101 gatagcggcc cgctgctttc agttcgccga gaagccttac cgcctcggcc ggcgcgcggc
     8161 cgctgtgatt ggcaatgatc tcgatcagcg cggcttccac gtccttggcc atgcgcagtg
     8221 cgtcgccaca gacgtagatg tacgcgccgt cgttgagcca cgaccacaga tcgcggccga
     8281 cttcgcgcat gcgatgctgc acgtagattt tctcgtcgcc gtcgcgcgac caggcgagcg
     8341 tcagccgcgt gagcaacccc gccgcccgca tcgccacaag ctcttcttca tagaagaaat
     8401 cgtagtcgcg gcgctgatgg ccgaagaaca gccagttgcg gcctggtgcg ttgacggcgt
     8461 gacgttcatg caggaaggca cggaatggcg cgaggccggt gccaggcccg atcatgatga
     8521 tcggtttcga cggatcctcc ggcagcgcga aatgctgcgc cttctgcacg tagaccctga
     8581 gcctgccgcc gggcgcgatg cggccgccga ggaaggtcga gcacacgcca aggcgcgtcc
     8641 gcttgtcgac ctcgtagcgc accgcgtcga cggtgagcga gacgcggccc ggattcgact
     8701 tgag
//
LOCUS       DATMQB010000204         4269 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2239860, whole genome shotgun sequence.
ACCESSION   DATMQB010000204 DATMQB010000000
VERSION     DATMQB010000204.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4269)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4269)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4269
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2239860"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1372
                     /locus_tag="VNY79_06240"
     CDS             <1..1372
                     /locus_tag="VNY79_06240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013653749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HWX72078.1"
                     /translation="GLFSIITGSYDFPAAHVLVDGVYTNKAPGGVAYRCSFRVTEAAY
                     CIERAMDIMAQKLGTDPAEFRIKNLIRREQFPYTSATGWQYDSGDYHTAMNKAMETVD
                     YKKLREEQKAKRDAFKRGETRELMGIGVAFFTEIVGAGPSRACDILGIAMFDSAEIRI
                     HPTGSGICRLGTKSQGQGHETTYAQIIATELGLPADNIMVEEGNTDTAPYGLGTYGSR
                     STPVSGAATAMACRKIKAKAQMIAAYMLEVHDDDLEWDVDRFQVKGNPERFKTMTELA
                     WAAYHEVPPGMEPGLEAINYYDPPNFTFPFGAYICVVDIDVDTGATKVRRFYALDDCG
                     TRINPMIIEGQIHGGLTEAFGIAMGQEIHYDDEGNVTTASFMDYFLPTAVETPHWETD
                     WTTTPSPHHPIGAKGVGESPNVGGVPCFSNAVNDAFAFLGSTHIQMPHDHWRTWTAAE
                     KLGLHG"
     gene            1526..2404
                     /locus_tag="VNY79_06245"
     CDS             1526..2404
                     /locus_tag="VNY79_06245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HWX72079.1"
                     /translation="MLKREEISDKLAAAGYIADRDIATALWLMEFLKRPLLLEGEAGV
                     GKTEVGKALAAVHAAELIRLQCYEGLDQNAALYEWNYQRQLLAIKTREGIGENADAIE
                     EHIFSEKYLLERPLLAAIRREKPPVLLIDEVDRADEEFEAFLLELLSDFQVSIPELGT
                     IKATSIPRVVLTSNGTRELSDALRRRCLYHYVDFPDVDREAKIIGTRTPGIDTTLALQ
                     IARMVAAVRKEDLRKVPGVAETLDWAATLAGLEVHDLRQEPEAVYETMICLLKTHEDR
                     ARVTREVSERLLGKVA"
     gene            2414..3691
                     /locus_tag="VNY79_06250"
     CDS             2414..3691
                     /locus_tag="VNY79_06250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007606572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HWX72080.1"
                     /translation="MTLPSHPEARAQRASKGDGTAARAASFEGGLRPPTQDDGQLRDA
                     RRRVAGFAHTLRDNGFKVGLAETQDALAVLASSVATRPSSLKPALRALFCATHSDWER
                     FDEVFDAYWQGRHMRQRQVLTGAPGGNAPPARRLAQAQVPQEALGLPDHVERRSGDSD
                     APADGRGRREGASRAETLTKTDLRHIVDPDDMAATHALAARLARVMRARLVRREQVRR
                     RGRRLDLRRTIHRNVSHGGTLIDLAWRRRKIKPLRLVMLLDASGSMSLYTAFFVRFLH
                     GVVDSFREAEAFVFHTRLAHVSPSLRDRDVTRAVDKLALMAQGIGGGTRIGESLATFN
                     RWHARRVINSRTAVMIVSDGYDTGEPERLGEEMRRLRRRCRRIIWLNPLIGWRDYSPQ
                     ARGMQAALPYVDLFAPAHNLQSLAALEPYLARI"
     gene            3694..>4269
                     /locus_tag="VNY79_06255"
     CDS             3694..>4269
                     /locus_tag="VNY79_06255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XdhC family protein"
                     /protein_id="HWX72081.1"
                     /translation="MSRADDILDIIATRRSTGEPFALATVVRTVAATAAKAGAKAVIL
                     PDGTISEGWIGGGCARAAVLRAAQDALADGRSRLVSVQPPDVLADRGVKPGEEQEGVR
                     FANNMCPSQGTMDIFVEPVLPRPQVVICGSSPVAVAVADLARRTGFAVIVCAPAAEQG
                     AFGDADRRIEGYALPVEDAGARYVVVSTQGRG"
BASE COUNT          721 a         1463 c         1412 g          673 t
ORIGIN      
        1 cggcctgttc agcatcatca ccggctcgta cgacttcccc gccgcccatg tcctcgtcga
       61 cggcgtctac accaacaagg cgccgggcgg cgtcgcctac cgctgttcgt tccgcgtcac
      121 cgaggcggcc tattgcatcg agcgcgccat ggacatcatg gcgcagaagc tcggcacgga
      181 cccggccgaa ttccggatca agaacctgat acgccgcgag cagtttccgt acacctcggc
      241 gaccggctgg caatacgatt ccggcgacta tcacaccgcc atgaacaagg cgatggagac
      301 ggtcgactac aagaagctgc gcgaggagca gaaagccaag cgcgacgcgt tcaagcgcgg
      361 cgagacgcgc gagctgatgg gcatcggcgt cgcgttcttc accgagatcg tcggcgccgg
      421 cccttcgcgc gcctgcgata ttctcggcat cgccatgttc gactcggcgg agatccgcat
      481 ccatccgacc ggcagcggca tctgccggct cggcaccaag tcgcaggggc agggccacga
      541 gacgacctac gcgcagatca tcgccaccga gctcggacta cccgccgaca acatcatggt
      601 cgaggaaggc aataccgaca ccgcgcccta cggcctcggc acttacggtt cgcgctcgac
      661 gccggtctca ggcgctgcga ccgccatggc atgccgcaag atcaaggcca aggcgcagat
      721 gatcgccgcc tacatgctcg aagtgcacga cgacgacctc gaatgggacg tcgaccgctt
      781 ccaagtgaaa ggcaatcccg agcgcttcaa gaccatgacc gagctcgcct gggccgctta
      841 ccacgaggta ccgcccggca tggagccggg gctcgaggcg atcaactatt acgacccgcc
      901 gaacttcacc tttccgttcg gcgcctacat ctgcgtggtc gacatcgacg tcgacaccgg
      961 cgcgaccaag gtgcggcgct tctacgcgct cgacgattgc ggcacgcgca tcaacccaat
     1021 gatcatcgaa ggccagatcc acggcggcct gaccgaggcg ttcggcatcg ccatgggcca
     1081 ggaaatccac tacgacgacg agggcaacgt gacgaccgcg tcgttcatgg actatttcct
     1141 gccgaccgcg gtcgagaccc cgcactggga gaccgactgg accacgacac cgtcgccgca
     1201 tcacccgatc ggcgccaagg gcgtcggcga aagcccgaat gttggcgggg tgccgtgctt
     1261 ctccaacgcg gtcaacgacg cattcgcgtt cctcggctcg acccacatcc agatgccgca
     1321 cgaccattgg cgcacctgga cggcggcgga aaaactcggc ctgcatgggt gacgccttgt
     1381 cgttccgggg cccgagcgcc gcgagggagc ccggaatcca taaccaccgc cgctcggtgg
     1441 tggcaccgac ggcgccaact gcttatttcc gtgggtatgg attcctggct cgccgctttg
     1501 cggcgccccg gaacgacgcc ccatgatcct caagcgcgaa gagatttcag acaaactagc
     1561 cgccgccggc tacatcgctg accgcgacat cgccaccgcg ttgtggctga tggaattcct
     1621 caaacgtccg ctgctgctgg aaggcgaggc cggcgtcggc aagaccgagg ttggcaaagc
     1681 gctcgccgcc gttcacgccg cggagctgat acgtctgcaa tgttatgaag gcctcgacca
     1741 gaacgcggcg ctttacgagt ggaactatca gcgccagctc ctcgccatca agacgcgtga
     1801 gggcatcggc gagaatgccg acgccatcga ggagcacatc ttttccgaaa agtatctctt
     1861 ggagcggccg ctccttgccg caatccgccg cgagaagccg ccggtgctgc tgatcgacga
     1921 ggtcgatcgc gccgacgagg aattcgaggc ttttttgctc gagctcctct ccgactttca
     1981 ggtgagtatt cccgagctcg gcaccatcaa ggcgacctcg atcccgcgcg tggtgctcac
     2041 ctcgaacggc acccgcgagc tgtccgacgc gctgcgccgg cgctgcctct accactacgt
     2101 cgattttccc gatgtcgatc gtgaggcgaa gatcatcggc acacgcacgc cgggcattga
     2161 cacgacgctg gcgctgcaga tcgcgcgcat ggtcgccgcg gtgcgcaagg aggatctgcg
     2221 caaggtgccg ggcgtcgcgg aaacgctcga ctgggcggcg acgctcgccg ggctcgaggt
     2281 gcacgacctg cggcaggagc cggaggccgt ctacgagacg atgatttgtt tgctcaagac
     2341 ccatgaggac cgcgcgcggg tgacccgcga ggtgagcgag cgccttctcg gcaaggtggc
     2401 gtgaggtcgt ctgatgactc ttcccagtca cccggaggcg cgagcgcagc gagcctcgaa
     2461 gggcgacggc acggccgctc gggccgcatc cttcgagggt ggccttcggc cgccaactca
     2521 ggatgacggg caactgcgcg acgcgcgccg ccgcgtggcc ggctttgcgc ataccttgcg
     2581 cgacaatggc ttcaaggtcg ggctcgccga gacgcaggat gcgctggccg tgctcgcttc
     2641 gtccgtggca acgcggccat cgtcgctcaa acctgcgttg cgcgcgctgt tctgcgcgac
     2701 ccattccgac tgggagcgtt tcgacgaggt cttcgatgcc tactggcagg gccgccacat
     2761 gcggcaacgg caggtcttga cgggcgcgcc gggcggcaac gcgccgccgg cgcggcggct
     2821 ggcgcaagcg caggtgccgc aggaagcgct cggcctgccg gatcacgtcg agcggcgctc
     2881 cggcgacagc gatgcaccgg cggacggccg cggccgccgc gagggcgcct cgcgcgccga
     2941 gacgctcacg aagacggacc tccgccatat cgtcgatccc gacgacatgg cggcgaccca
     3001 cgcgcttgcg gcgcggctcg cccgggtgat gcgggcgcgg ctggtgcgcc gcgaacaggt
     3061 gcgccggcgc ggccgccgcc tcgacctgcg ccgcaccatt catcgcaacg tctcgcatgg
     3121 cggaaccctg atcgacctcg cctggcggcg ccgcaagatc aagccgctgc ggctcgtcat
     3181 gctgctcgat gcctcgggct cgatgagcct ctacacggcg tttttcgtcc gcttcctcca
     3241 tggcgtcgtc gacagcttcc gcgaagcgga agccttcgtg ttccataccc ggctcgcgca
     3301 cgtctcgccg tcgctgcgcg accgcgacgt gacgcgcgcg gtcgacaagc tcgccttgat
     3361 ggcgcaaggc atcggcggcg gcacgcgcat cggcgagagc ctggctacgt tcaatcgctg
     3421 gcacgcgcgg cgcgtgatca attcgcgcac cgcggtgatg atcgtctccg acggctatga
     3481 caccggcgag ccggagcggc ttggcgagga gatgcgacgg ctgcgccggc gctgccgaag
     3541 gattatctgg ctcaatccat tgatcggctg gcgcgactat tctccgcagg cgcgcggcat
     3601 gcaggcggcg ctgccttacg tcgacctgtt cgcgcccgcc cacaacctgc aaagcctggc
     3661 ggcgctggag ccgtatctgg cgaggatctg atcatgtccc gcgccgatga cattctcgac
     3721 atcattgcga cgcggagatc gactggcgag ccgttcgcgc tcgcaaccgt cgtgcgcacc
     3781 gtggcggcga ccgcggccaa ggccggcgcc aaggcggtga tcctgccgga cggcaccatc
     3841 tcggaaggct ggatcggcgg cggttgcgct cgcgcggcag tgctcagggc cgcgcaggac
     3901 gcgctcgccg acggacgctc gcggctcgtc tcggtgcagc cgcccgacgt gctcgccgac
     3961 cgcggcgtga aaccgggcga ggagcaggag ggtgtgcgtt tcgccaacaa tatgtgcccg
     4021 agccagggaa cgatggacat tttcgtcgag ccggtattgc cgcggccgca ggtggttatc
     4081 tgcggctcaa gtccggtcgc ggtcgcggtc gccgatctcg ccaggcgaac gggcttcgcc
     4141 gtcatcgtgt gcgcgcctgc ggccgagcag ggcgcgttcg gcgatgccga ccgccgcatc
     4201 gaaggctatg cgcttccggt ggaggatgcc ggcgcgcgct acgtggtggt gtcgacgcag
     4261 ggccgcggc
//
LOCUS       DATMQB010000205         5971 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4096261, whole genome shotgun sequence.
ACCESSION   DATMQB010000205 DATMQB010000000
VERSION     DATMQB010000205.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5971)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5971)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5971
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4096261"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(77..1459)
                     /gene="gor"
                     /locus_tag="VNY79_06260"
     CDS             complement(77..1459)
                     /gene="gor"
                     /locus_tag="VNY79_06260"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004362 - glutathione-disulfide reductase
                     (NADP) activity [Evidence IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HWX72082.1"
                     /translation="MADYDVDLFVIGGGSGGVRAARMAAQHGARVMVAEEYRVGGTCV
                     IRGCVPKKLLVYASRFRAEFEDAEGYGWTTAHSKFDWPTLITNKDLEIARLEAAYTAV
                     LEKAGVTIVKSRAQLTDAHTVQLADGKKVRAAYILIATGGAPSYGDPIPGIEHAISSN
                     EAFHLPQLPHHVVIQGGGYIALEFAGIFAGLGAHVTIVYRGENILRGFDDDVRAHLRM
                     DMEKRGVRVVTGCTIAAIERTGSRFSARLSSGNHLAADCVMFATGRNPNVTGIGLEKA
                     GVAIAANGGVAVDEYSRTATPHIYAIGDVTNRINLTPVAIREGAAFADTVFGGKPTAV
                     DHTNVPTAVFSDPEIGAVGLTEAEARARLARTDIYRAMFRPLKATLSGRDTTVLLKLV
                     VDGSNDSMVGCHIVGEGAAEMVQLAAIAVKMGATKAVFDATLALHPTTAEELVTMRHR
                     SASYAREAAE"
     gene            complement(1490..2188)
                     /gene="rpiA"
                     /locus_tag="VNY79_06265"
     CDS             complement(1490..2188)
                     /gene="rpiA"
                     /locus_tag="VNY79_06265"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004751 - ribose-5-phosphate isomerase
                     activity [Evidence IEA];
                     GO_process: GO:0009052 - pentose-phosphate shunt,
                     non-oxidative branch [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HWX72083.1"
                     /translation="MTAEVHKRAAAARALDFVRPGMRVGLGTGSTAKHFVELLAERVR
                     AGLDILAVPTSEVTRAQAERLGIALTTLEETPELDLTVDGADEIAPDLTLIKGGGGAL
                     LREKIVAVASARMVVIADETKWVSILGSFPLPIEIALFGAAATHGSVELATAEVGCPG
                     PAALRKGPDGQPVVTDGGHWILDAQLLRINDPPALAARLCRVPGVMEHGLFIGIAQTA
                     IVAGSDGVRLIERR"
     gene            2302..3009
                     /locus_tag="VNY79_06270"
     CDS             2302..3009
                     /locus_tag="VNY79_06270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HWX72084.1"
                     /translation="MLTIVFDLDGTLVDTAPDLIGTLNLIFTQHGLSAVPLEASRPLI
                     GGDARAMIERALVAEGRNPSAADVDALYAPFIAHYAARIADRSRAYPQVEMALDRLAE
                     RGHQLAVCTNKLEWLSKRLLDTLHLAGRFAAICGQDTFGVQKPDPEIFRQTVRRAGGD
                     PKRAVMVGDSATDLRTARAAGAPVIAVDFGYADVPVATLGPDRVISSFAALPGAVADL
                     ASAKNMVDDQAFIGHKS"
     gene            3140..4195
                     /gene="moaA"
                     /locus_tag="VNY79_06275"
     CDS             3140..4195
                     /gene="moaA"
                     /locus_tag="VNY79_06275"
                     /EC_number="4.1.99.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011975731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HWX72085.1"
                     /translation="MDSVEVERVQGRDLDGAAMRPALVDPFGRAITYLRVSVTDRCDF
                     RCVYCMAEDMHFLPKADLLTLEELDRLCSAFIARGVRKLRLTGGEPLVRRGIMTLFAS
                     LTRHLESGHLDELTLTTNGSQLAKYARELKEHGVHRVNVSLDTLDAEKFRAITRWGSL
                     PDVLAGIDAAQAAGLKIKINAVALKGVNEDEFPGLIEWAHGRGLDFTLIEVMPLGEIG
                     EGRLDQYLPLSVVRARLAERFTLEDLDYRTGGPARYVRVAETGGRLGFITPLTHNFCE
                     SCNRVRITCTGTLYMCLGQEDAADLRKPLRASEGDDLLSGAVEEAISRKPKGHDFIID
                     RRHQRPAVARHMSATGG"
     gene            4300..4542
                     /locus_tag="VNY79_06280"
     CDS             4300..4542
                     /locus_tag="VNY79_06280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PsiF family protein"
                     /protein_id="HWX72086.1"
                     /translation="MKSLIGGTVLLLAIGVGAALGQTSTPAPADKPAAASKMSADEKK
                     AISKACSDQANAKGLHGEARKKFRSECKHAGGKAPQ"
     gene            complement(4631..>5971)
                     /locus_tag="VNY79_06285"
     CDS             complement(4631..>5971)
                     /locus_tag="VNY79_06285"
                     /inference="COORDINATES: protein motif:HMM:NF012296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HWX72087.1"
                     /translation="LGPLALLKTLRTNPLECWTRAHFEQPIVLGGFPFARVALISDPA
                     AIRQVLIEDQSAYRKSAIERRVMAAHMPTGLVTVDGEHWHRLRRLLAPMFGRKMTAGF
                     AQAMARVAAALVERLQSRPDGSVWEIKTEMSRVALDALFGCIFSDGLGDPEAIRAATT
                     RYFATSSGLDPFDVIGLPDFVPRLTRVGVRSTAKAFNDALTAAIAERRRNLAADPDAP
                     RDMLGAMLAAKDPQTGAQMTEAEVKDNVITFIFGGQETTSTTLTWAIYLLSQSPEWRE
                     RLTEEAENAADGSGQDAALVQTRAVVEEALRLYPPIIGITRTAMRRAELAGHKIERGT
                     MVVISPYVLHRHRLLWRDPDLFDPSRFLPGAARAIERYAYLPFGVGPRVCIGAAFALQ
                     EATLVLATLMRNFTLDLAPGQSVWPVINFTLRPRDGLRVTVRRRHAQPELRAAE"
BASE COUNT         1003 a         2014 c         1967 g          987 t
ORIGIN      
        1 ccactatcgc ggcccggccg gaatgagccc ggatatatac acggcggccc cagccggcga
       61 cagcccggcg acttcgctat tcggctgctt cgcgggcata actcgcactt cggtgccgca
      121 tggtgaccag ctcctcggcg gtggtcggat gcagcgccag ggtggcgtcg aaaacggcct
      181 tggtggctcc catcttcacg gcgatggcgg cgagctggac catctcggcc gcgccttccc
      241 cgacgatatg gcagccgacc atgctgtcgt tcgagccgtc gaccacgagc ttgagcagca
      301 ccgtcgtgtc gcgcccggac aaggtcgcct tcagcggcct gaacatcgcg cgataaatgt
      361 cggtgcgcgc caagcgggcg cgcgcctccg cctcggtgag gccgacggcg ccgatttccg
      421 gatcggagaa caccgcggtt ggcacgttgg tgtggtcgac ggcggtcggc ttgccgccga
      481 acaccgtgtc ggcaaacgcg gcgccttcgc ggatggcgac cggcgtaagg ttgatgcggt
      541 tggtcacgtc gccgatcgca tagatgtggg gcgtcgcggt acgcgagtat tcgtcgacgg
      601 caacgccgcc gttcgcggcg atcgcgacgc ccgccttctc aaggccgatg ccggtcacgt
      661 tcgggttgcg gcccgtggcg aacatcacgc agtcggcagc gaggtgattg ccgctcgaca
      721 gccgcgcgga aaaacgcgag ccggtccgct cgatggcggc gatcgtgcag ccggtgacaa
      781 cccgaacgcc gcgcttctcc atgtccatcc gcaagtgcgc ccgcacgtca tcgtcgaagc
      841 cgcgcaggat attttcgccg cgataaacga tcgtcacgtg tgcgccgagg ccggcaaaaa
      901 ttccggcaaa ctccagcgcg atatagccgc cgccctggat gacgacgtgg tgcggtagtt
      961 gagggagatg gaacgcctcg ttcgaggaga tcgcgtgctc gataccggga atcgggtcgc
     1021 cataactcgg cgccccgccg gtggcgatca ggatgtaggc cgcgcgtacc tttttaccgt
     1081 cggccaattg caccgtgtgg gcgtcggtga gctgcgcccg gctcttgacg atggtgacgc
     1141 ccgccttctc caggactgcg gtgtaggctg cctccagacg cgcaatttcg aggtccttgt
     1201 tggtgatgag cgtcggccaa tcgaatttcg agtgggcggt ggtccagccg tacccttccg
     1261 cgtcttcgaa ctcggcgcgg aagcgcgacg catagaccaa aagtttcttc ggcacgcagc
     1321 cgcggatgac gcaggtgccg ccgacgcggt attcctcggc gaccatcacc cgcgcgccat
     1381 gctgggcagc catgcgcgcg gcgcggacgc caccggagcc gcctccaata acgaaaagat
     1441 caacgtcgta gtcggccatg ctgattgcgc gcgctccctt gccgatcgat cagcgtcgct
     1501 cgatgagccg caccccgtcg gaaccggcga caatagcagt ctgcgcaatg ccgatgaaca
     1561 agccgtgttc catcactccc ggcacccggc aaagccgcgc cgccagggcc ggcggatcgt
     1621 tgatgcgcag caattgcgcg tcgaggatcc agtgcccacc gtcggtaacg acgggctggc
     1681 cgtccggccc cttgcgcaac gccgccggtc ccgggcagcc gacttcggcc gtcgccagtt
     1741 cgaccgagcc gtgggtcgcc gccgcgccga agagagcaat ctcgatcggt agcggaaagc
     1801 tgccgaggat cgaaacccat ttcgtttcgt cggcgatcac gaccatccgc gccgaggcca
     1861 cggcgacgat cttctcgcgc agcagcgccc cccctccccc cttgatcagc gtcaggtccg
     1921 gcgcgatctc gtcggcgccg tcaacggtga gatcaagctc gggcgtctcc tcaagggtcg
     1981 tgagcgcgat gccgagccgt tccgcttgcg cacgcgtcac ctcggatgtc ggaacggcga
     2041 ggatatcgag cccggcccgc acgcgctcgg caagcagttc gacgaagtgc ttggcggtgg
     2101 agccggtgcc gaggccgacg cgcatgcccg ggcgcacgaa atcgagcgcg cgggcggcgg
     2161 cggcacgttt gtggacttcg gcggtcatgg ccggtgtgta gcggtcccgg agccgcgatc
     2221 atagtaccaa catcgaccgt cgcggtgagt caccggcgcg aatgcttgcg cccgaggcgc
     2281 gcggccgcta ggcgaaagca catgctcacc atcgtcttcg accttgacgg cacgctggtc
     2341 gacacggcgc ccgacctcat cggcacgctc aatctcatct tcacgcagca cggactgtcc
     2401 gccgtcccgt tggaggcctc gcgcccgctg atcggcgggg acgcgcgggc gatgatcgaa
     2461 cgggctttgg ttgcggaggg ccgcaaccct tcagccgccg atgtcgacgc cctctatgcc
     2521 ccgttcatcg cccactatgc cgcccgcatc gccgaccgct cccgcgccta tccgcaggtc
     2581 gagatggcgc tcgaccgcct cgccgagagg ggtcaccagc tcgcggtatg caccaacaag
     2641 ctcgaatggc tatcaaagcg cctcttggac acgctgcacc ttgccggccg ttttgccgcg
     2701 atctgcggcc aagatacgtt cggcgtgcag aagcccgatc cggagatttt ccggcagacg
     2761 gtcaggcgcg ccggcggcga tccgaagcgc gccgtcatgg tcggcgattc cgcgactgat
     2821 ctccgcaccg cccgcgccgc cggcgccccc gtcatcgctg tcgatttcgg ctatgcggac
     2881 gtgccggtgg cgacgctcgg gccggaccgg gtcattagct cctttgcggc gctgccggga
     2941 gcggtcgcgg atctcgcaag cgcaaagaat atggtggacg atcaggcctt tatcgggcac
     3001 aaaagctgac tatatgccgg taatggagag ccagaccccg gcagcggctc aaatggagcc
     3061 ggaagcatgg tccggaagag cggacgccgc tttgccggaa agaccgtgct taccgacaag
     3121 aacacggaaa cgcctgccga tggacagcgt ggaagtggaa cgcgtgcaag gccgcgacct
     3181 tgatggcgct gcaatgcgcc cggcgctggt cgaccccttc gggcgtgcca tcacctatct
     3241 gcgcgtttcg gtgaccgacc gctgcgactt ccgctgcgtc tactgcatgg cggaagacat
     3301 gcactttttg cccaaggccg atctgctcac gctcgaggaa ctggaccggc tgtgctcggc
     3361 gttcatcgcg cgcggcgtgc gcaagctgcg cctgaccggc ggcgagccgc tcgtgcgccg
     3421 cggcatcatg accctgttcg cctcgctgac gcggcacctt gagtccggcc acctcgacga
     3481 actgacgctg accactaacg gctcgcagct cgccaaatac gcgcgggagc tcaaagaaca
     3541 cggcgtgcac cgcgtcaacg tctcgctcga caccctcgac gcggagaaat tccgcgccat
     3601 cacccgctgg ggctcgctgc ccgacgtgct ggccgggatc gacgcggcgc aggcggccgg
     3661 cctcaagatc aagatcaacg cggtcgcgct caagggcgtg aacgaggacg aattccccgg
     3721 cctgatcgaa tgggctcacg ggcgcggctt ggatttcacg ctgatcgagg tgatgccgct
     3781 cggcgagatc ggcgaaggcc gcctcgacca gtacctgccg ctctcggtcg tgcgcgcgcg
     3841 ccttgccgaa cgctttacac tcgaagatct cgactatcgt acaggcggac ccgcccgtta
     3901 cgtccgcgtc gccgagaccg gcgggcggct cggcttcatc acgccgctta cccacaattt
     3961 ctgcgagtcg tgcaatcgcg tccgtatcac ctgcaccggc acgctctaca tgtgcctcgg
     4021 ccaggaggac gcggccgatc tgcgcaagcc gctgcgcgcc tccgagggcg acgacctcct
     4081 ctctggcgcc gtcgaggagg cgatttcgcg caagcccaaa ggacacgatt tcatcatcga
     4141 ccgccggcac cagcggcccg ccgtcgcgcg gcacatgagc gcgaccggcg gctgagtgtt
     4201 atcggcgagc ttcgccaatg ccgttgcgga cgcccggcac gtgattttgg cgcccggatc
     4261 cgaagtctta acgcacgaca ctttcaaggg gaggccactg tgaaatcgct catcggcggt
     4321 accgtgttgt tgctcgcgat cggggtcggc gccgcgctcg gtcagacctc tactcccgct
     4381 ccggcggaca agcctgcagc ggcgtccaag atgagcgcgg acgagaagaa ggcaatctcc
     4441 aaggcctgct ccgaccaggc caatgccaag ggcctgcatg gcgaggcccg caagaaattc
     4501 aggtcggagt gcaagcacgc gggcggcaag gcgccacaat agcgcgcctt gagcttctat
     4561 cgccgccccg atcgttccat cgccgactga acggcgccgg cagctgcgct ggttgcgcgg
     4621 gggcgcctcg ctattccgct gcgcgcagct ccggctgcgc gtgacgacgc ctcaccgtca
     4681 cacgcaggcc gtcgcgcggt cgcagggtga aattgatgac cggccacacc gattggccgg
     4741 gcgccaggtc gagcgtgaag ttgcgcatga gcgtcgccag cacgagggtt gcttcctgta
     4801 gcgcgaacgc cgcaccgatg cacacgcgcg ggccgacgcc aaagggaaga taggcgtatc
     4861 gctcgatggc cctcgccgcc ccgggaagga aacgtgatgg atcgaacagg tccgggtcgc
     4921 gccacagcag ccgatgccgg tgcagcacgt agggcgatat gacgaccatc gtgccgcgtt
     4981 cgatcttatg cccggcgagc tcggcgcgcc gcatcgccgt ccgcgtgatg ccgatgatgg
     5041 gcgggtagag cctcagcgcc tcttccacga ccgcgcgggt ctgcaccagc gcagcatctt
     5101 ggccggagcc gtcggccgcg ttctctgctt cctcggtgag gcgctcgcgc cattcgggag
     5161 actgcgagag cagatagatc gcccaggtca acgtcgtcga cgtcgtttcc tgtccgccga
     5221 agatgaaggt tatgacgttg tccttgactt ccgcttccgt catttgcgcg ccggtttgcg
     5281 ggtccttggc tgcaagcatg gcgccgagca tgtcgcgcgg agcatccgga tcggcggcga
     5341 ggttgcgccg ccgttcggcg atggcggcgg tcagcgcgtc gttgaaggct ttcgccgtgg
     5401 accgcacgcc gacccgcgtg agccgcggga cgaaatcggg caggccgatg acatcgaatg
     5461 gatcaagacc gctgctcgtc gcgaagtacc gcgtggtcgc cgcgcggatc gcttcaggat
     5521 cgccgagccc atcggaaaag atgcagccga agagcgcgtc gagcgcgacg cggctcatct
     5581 cggtcttgat ctcccacacg ctgccgtccg ggcggctttg caagcgctcg acgagcgcgg
     5641 cggcgacgcg cgccatcgcc tgagcaaatc ccgccgtcat cttccgaccg aacatcggcg
     5701 ccagcaggcg tcgtaatctg tgccagtgct ctccgtccac ggtgacgagc cccgtgggca
     5761 tgtgcgcagc catgacgcgg cgctcgatgg cgcttttgcg ataggctgac tgatcttcga
     5821 tgagaacctg acggatcgcc gctggatcac tgatgagcgc aacgcgcgcg aacggaaatc
     5881 cgccgagcac gatcggctgt tcgaaatgag ccctggtcca gcactcgagc gggttggtcc
     5941 gcaacgtctt caggagggcc agcggaccga g
//
LOCUS       DATMQB010000206         9837 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_376948, whole genome shotgun sequence.
ACCESSION   DATMQB010000206 DATMQB010000000
VERSION     DATMQB010000206.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9837)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9837)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9837
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_376948"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            327..1259
                     /locus_tag="VNY79_06290"
     CDS             327..1259
                     /locus_tag="VNY79_06290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HWX72088.1"
                     /translation="MNDDIPYNKAFDLEPGRAEEVAPGVRAIVANNPGPFTFKGTVSY
                     VIGRGKVAILDPGPDDEAHIAAVLDAVRSETVTHIFVTHTHRDHSPAVPKVKAATGAM
                     VYAQGPHRAARPLHIGETNRLDASADLDFRPDIALGDGEVVSGDGWTLEAVTTPGHTA
                     NHLAYALRESDLLFSGDHVMAWSTSIVAPPDGAMSDYMDSLAKLARRSEPIYLPGHGG
                     LVREAPRFVQKLIGHRVGREASILRRLGKGAADIPTLVRAIYIGLDPRLVGAASLSVL
                     AHLEDLVARGAVSTEGAPAIGGTYRLGEPPLPAA"
     gene            complement(1223..2071)
                     /locus_tag="VNY79_06295"
     CDS             complement(1223..2071)
                     /locus_tag="VNY79_06295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1499 domain-containing protein"
                     /protein_id="HWX72089.1"
                     /translation="MVRRRIAPQPTSRLALWARRIALFSLAATFIAVVVVRSGALDIV
                     PALSTLAGGLALAVIAILLAFGAGIVIWREGIGGVREAITALLIGIALIAYPLYLGVK
                     SYRLPAIYDITTDPIDPPRFEVIARLRPRDAHPVTYAGLYAAEQQRASYSDIEPDLTD
                     SSPVEAYEAVLKVITKRKWAIVDARPPQGAGSRDGHIEAIAHTMILGFRDDVAVRVRA
                     TVDGSRIDIRSASRYGRSDLGANAARVRDLISDIDEVLAAPQPEKKEAPAKPTHAAGK
                     GGSPKR"
     gene            2383..3555
                     /locus_tag="VNY79_06300"
     CDS             2383..3555
                     /locus_tag="VNY79_06300"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004648 -
                     O-phospho-L-serine:2-oxoglutarate aminotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoserine transaminase"
                     /protein_id="HWX72090.1"
                     /translation="MTIAPPAVRPTVPHFSSGPCAKRPGWSLQALHGAFLGRSHRSKP
                     GKAKLKRAIDLTREVLQVPGDYRIGIVPASDTGAVEMALWSLLGPCPVTMLTWESFGE
                     GWVNDTVKELKLKNVTVLRAAYGELPDLARVDAASDIVFTWNGTTSGVRVPNADWIAV
                     DRAGLTICDATSAAFAQPLDWPKLDVVTFSWQKALGGEAAHGMLILSPRAVARLESYT
                     PPWPLPKIFRMAKAGKLNEGIFEGETINTPSMLCLEDYLDTLEWAKSVGGLSALHARA
                     DANARVIAEWVERTKWIDFLARDPASRSNTSVCLKVVDPAVGRLAPEAQAAFVKGIAA
                     ALEKEGVAYDIDAYRDAPPGLRIWCGSTVERADVEALTQWLDWAYAKAKNALAEAA"
     gene            3645..5231
                     /gene="serA"
                     /locus_tag="VNY79_06305"
     CDS             3645..5231
                     /gene="serA"
                     /locus_tag="VNY79_06305"
                     /EC_number="1.1.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004617 - phosphoglycerate dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006564 - L-serine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HWX72091.1"
                     /translation="MQPRVLISDALSPAAVAIFEDRGVKVEFQPGLGKDKEKLAETIN
                     GFDGLAIRSATKVTAKILERAKSLKVIGRAGIGVDNVDIPAATARGIIVMNTPFGNSI
                     TTAEHAITLMLSLARQIPEADASTRAGKWEKNKFLGVEMFGKTLGIIGCGNIGSIVAD
                     RAIGLRMKVIAYDPYLSAERALGLGVGKVELEQLLRRADFITLHTPLTDKTRNIISRE
                     SLALTKKGVRLINCARGELVDEAALFDALTARHVAGAALDVFVEEPATASPLFALPNV
                     VCTPHLGASTTEAQENVALQVAEQMSDYLIRGAITNALNFPSISAEEAPKLKPFVALA
                     EKLGSFAGQLTETGIKQVQLSYEGAVAQMNTRALTSAAIAGLLRPMLQHVNVVSAPIV
                     AKERGIIVEETRREAEGDYESLINVAVVTGRQTRSVAGTVYADGRPRIVNIKGIRMDA
                     EFGPSMLYVTNQDKPGFVGRFATILAAAGINIATFHLGRDNAGGNAIALVEVDGMVAA
                     DVLAQVLEIPNVQQVKPLRF"
     gene            5437..6729
                     /locus_tag="VNY79_06310"
     CDS             5437..6729
                     /locus_tag="VNY79_06310"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004019 - adenylosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HWX72092.1"
                     /translation="MANVVVVGSQWGDEGKGKIVDWLSEQADIVVRFQGGHNAGHTLV
                     IDGITYKLSLLPSGVLRPGKLSIIGNGVVLDLHALLEEIERLKAQNVAVTPDNLRIAE
                     NTTLILPLHRELDALRESSNEMTRIGTTRRGIGPAYEDKVGRRAIRLMDLADGATLDA
                     KIERLLAHHNALRRGLGLEALSARAIRDDLMQVAPHALPFMDRVWSLLEQKRREGKRI
                     LFEGAQGALLDVDHGTYPYVTSSNTVAAQAATGSGVGPNAIGYVLGICKAYTTRVGEG
                     PFPTEQDNEVGRALGKRGKEFGVVTGRPRRCGWFDAVLVRQTVRTGGIQGLALTKLDI
                     LDGFDEIKVCVGYRLDGREIDYLPAAEHAQARVEPIYETIPGWREKTAHARSWADLPA
                     QAIKYVRRLEELIGCPAAILSTSPEREDTILMQNPFET"
     gene            6770..8335
                     /locus_tag="VNY79_06315"
     CDS             6770..8335
                     /locus_tag="VNY79_06315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72093.1"
                     /translation="MTDYHPLIARAVEGLDRSTGEARRALYERARNALVAQLRSNQPA
                     LSEADITKERLALEEAIRRVEAEAARKSRNESRAEQRTEPRAAAAPAAAPEGAAQVRR
                     ASGAPRRDRSSPPPADLPRAGWTAVLPSARERLLSGRSSLKKQGVKGFRDVVGEVHDL
                     GAATAKAAQAARHTREAFEPEAPQYPPEEPSAPSHRFEPEFDPEELNSVEYDTRSRDL
                     EPAYEREDEHPVPAAPVRYSPPSAAPPAEEEYERKRPPISYGGMARLLVVLIILAGVV
                     ATIFWQWSAITGLYQYVSHIGSKPQTQAGHETPSAQPKFSGRVPQEQSSGQAPGTSAP
                     SAQTAPAVAQRIVLYEEDPNDQQGRRYVGSAIWRTETISPGPGLAPELAIRADVEIPE
                     RRITVTWSLRRNTDKALPASHTIEIMFNLPADFPGGGIANVPGILMKQAEQARGTPLS
                     GLAVKVTNGFFLIGLSAVDTDVQRNMQLLKDRSWFDIPVVYTNGGRAILAMEKGPPGD
                     RAFGEAFAAWEKK"
     gene            8371..9390
                     /locus_tag="VNY79_06320"
     CDS             8371..9390
                     /locus_tag="VNY79_06320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013216614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="KpsF/GutQ family sugar-phosphate isomerase"
                     /protein_id="HWX72094.1"
                     /translation="MLGATANSSADALALKAKPHAFIASALRTLETEREGVAALAAAM
                     SDGLGPRFVAAVDTIRAARGRVIVTGMGKSGHVARKIAATLASTGTPAFFVHAADASH
                     GDLGMITSDDVMLVLSWSGETEELKDLINYSRRFRIALIAVTVNADSTLGKSADIVLV
                     LPQAREACPHNLAPTTSSLMQLALGDALAIALLESRGFTAVDFGVFHPGGKLGAALKF
                     VRDVMHPGSAVPLIACDALMSEAIVEMSAKGFGCVAVTNGDGRLLGVITDGDLRRHMR
                     DDLLRAPVGEVMTASPKTVRPGQLASEALELINSLKITALIVVESDRPVGIVHFHDLL
                     RAGVA"
     gene            complement(9571..>9837)
                     /locus_tag="VNY79_06325"
     CDS             complement(9571..>9837)
                     /locus_tag="VNY79_06325"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72095.1"
                     /translation="GSCSSFSGYVADHWPRWAGGMPDDVPPRPGAPGYEEFVAHGQPS
                     NVAARPVATDVKPAAADVKTDAAPIPAQEQSANAPNAVQRGGLY"
BASE COUNT         1747 a         3277 c         3221 g         1592 t
ORIGIN      
        1 ggcgtgatcg ccggcgcctt catcaagttg actttcaaca ccatgctgaa gaaaagggct
       61 tacaccaagg agagcatggc ggaattggtc gcacggtcgc ggttcgggca gggcgacatc
      121 cgcttggacc cgatgggttt cgaggtgtgg ctgcggaagt aggacgattt gtgtactggc
      181 cggacgaggt ggctggatga ggtccgtgcg cattgatccg caatcgctgc gttgaagaag
      241 aaatttggag ccgatcgcgg caataactgt gtgatggatt gcgaacttgc tgcttcgcgg
      301 cgctccgcaa cgaatagact ctcggcatga acgacgacat cccgtacaac aaggcgtttg
      361 atcttgagcc cggccgcgcc gaggaagtgg cgccgggcgt gcgcgcgatc gtcgccaaca
      421 atcccggtcc gttcaccttc aaggggacgg tcagttacgt catcggccgc ggcaaggtgg
      481 cgatactcga ccccggcccg gacgacgagg cccatatcgc ggcggtgctc gatgcggtgc
      541 gcagcgaaac cgtgacccat attttcgtca cccacaccca tcgcgatcat tcgccggccg
      601 tgccgaaggt caaggccgcg accggtgcca tggtctatgc gcaaggcccg caccgcgcgg
      661 cgcggccact gcatatcggc gagaccaacc ggctcgatgc cagcgccgac cttgatttcc
      721 ggcccgacat cgcgctcggc gacggcgagg tggtgtcggg cgacggctgg acgctcgaag
      781 cggtgacgac gccgggccac accgcgaacc acctggccta tgccttgcgg gaatcggatc
      841 tgctgttttc cggcgatcac gtgatggcgt ggtcgacatc gatcgtcgcg ccaccggatg
      901 gcgcgatgag cgattacatg gattccctcg ccaagctcgc ccggcgaagc gagccgatct
      961 atctgcccgg gcacggcggc ctcgtgcgcg aggcgccgcg cttcgtgcag aaactgatcg
     1021 ggcatcgcgt aggacgcgag gcgtcgatcc tgcgccgcct cggcaagggc gcggcggaca
     1081 tcccgacatt ggtgcgggcg atctatatcg ggctcgatcc gcgcctcgtc ggcgcggcat
     1141 cgctctcggt gctcgcgcat ctcgaagacc tggtcgcgcg cggcgcggtc tcgaccgagg
     1201 gagcgccggc gatcggcggc acctaccgct tgggggagcc tcccttgccc gccgcgtgag
     1261 tcggtttcgc cggcgcctcc tttttctccg gctgtggcgc ggcgagaacc tcatcgatgt
     1321 ccgagatgag gtcgcgcacc cgcgcggcgt tggcaccgag atcgctgcgg ccgtagcgcg
     1381 aggccgagcg gatgtcgatc cgcgatccgt ccaccgtcgc gcgcacgcgc accgccacgt
     1441 catcgcggaa gccgaggatc atggtgtggg cgatcgcctc gatatggcca tcgcgcgagc
     1501 cggccccttg cggcgggcgg gcatcgacga tcgcccattt gcgcttggtg atgaccttga
     1561 gcacggcctc ataggcctcg accggcgaag aatcggtcag gtccggctca atgtccgaat
     1621 agctcgcgcg ctgctgttcc gcggcgtaga ggccggcata ggtgaccggg tgcgcgtccc
     1681 gcggacgaag ccgcgcgatc acctcgaacc gcggcgggtc gatcggatca gtcgtgatgt
     1741 cgtagatcgc cggcagccgg taggacttca cgccgagata gagcggataa gcgatgagcg
     1801 cgatcccgat gagcagcgcg gtgatggcct cgcgcacccc gccgatgccc tcccgccaga
     1861 tgacgatgcc agcgccgaag gccagcagga tcgcgatcac ggcgagcgcc aatccgcccg
     1921 cgagggtgga aagagccggc acgatatcga gtgcgcccga acgcaccacg acgacggcaa
     1981 tgaaagtcgc cgcgagcgaa aacagcgcga tccgccgcgc ccaaagggca agccgtgacg
     2041 tcggctgtgg agcgatgcgc cgccgcacca tgtcgtgcgc tttccagtcc tattggctgc
     2101 cgcgcgaggc tacagggtca ccttaaacac gaatagtggc ttcccctgag gcaggcaaca
     2161 aatccgcctc actgcggggc cggcgccaga tccgcgtgcg aaaaatcctc gcctttgtag
     2221 cagcgggcgg cggggtccgt catttcggag cccgaaaatt tggcgttgtc gaggtagaca
     2281 cgaccaatcc gccaaccggc ttgacgggtc tcggccgctt ccttatgtgc gtccgcggga
     2341 cacccctccc caacgagggg cgcctatctg caaggataga ccatgacgat tgccccgcct
     2401 gccgtgcggc cgactgtgcc gcatttttcg tccggcccct gcgccaagcg ccccggctgg
     2461 agcttgcaag ccctccacgg tgccttcctc ggacgctcgc atcgctcgaa accgggcaag
     2521 gcgaagctca agcgcgccat cgatctgacg cgcgaagttc ttcaggtccc cggcgactac
     2581 cgcatcggca tcgtgccggc ctccgacacc ggcgccgtcg agatggcgct ctggtcgctg
     2641 ctcggcccat gccccgtgac catgctcacg tgggagtctt tcggcgaagg ctgggtgaac
     2701 gacacggtca aggagctcaa gctcaagaac gtgacggtgc ttcgcgccgc ctacggcgaa
     2761 ctgcccgatc tcgccagggt cgacgccgca agcgacatcg tgttcacctg gaacggcacg
     2821 acctcgggcg tgcgtgtccc caatgccgac tggatcgccg tggatcgcgc cggcctcacg
     2881 atctgcgacg cgacctcggc cgcattcgcg caaccgctcg actggccgaa actcgacgtc
     2941 gtcaccttct cctggcagaa ggcgctcggc ggcgaggccg cgcacggcat gctcatcctc
     3001 tcaccgcgcg cggtcgcgcg gcttgagagc tacacgcccc catggccgct gccgaagatc
     3061 ttccgcatgg ccaaggccgg caagctcaac gagggcatct tcgagggtga gaccatcaac
     3121 acgccgtcaa tgctgtgcct cgaggactac ctcgacacgc tcgaatgggc gaaatcggtc
     3181 ggcggactgt cggcgttgca cgcccgcgcc gacgccaacg cgcgagtcat tgccgaatgg
     3241 gtcgagcgca ccaagtggat cgatttcctc gcccgcgatc cggcgtcacg ttccaacaca
     3301 tcggtttgtt tgaaagtggt cgatccggcc gtcggtcggc ttgcgcccga ggcgcaggcg
     3361 gcgttcgtca agggcatcgc cgcggctctg gagaaggaag gcgtggccta cgatatcgac
     3421 gcctatcgcg atgcgccgcc gggactgcgt atctggtgcg gctcgaccgt cgagcgcgcc
     3481 gatgtcgagg cgctcacgca atggctcgat tgggcctacg ccaaggccaa gaacgcgctg
     3541 gctgaggcgg cctaggccac cacgtccatg atttttcaac tcgtcgtcct gcggcagcgc
     3601 atgaaagagc cgggccgcgg cacctgacat cgacaggaaa tcccatgcag cccagagtac
     3661 tcatctccga cgcgctttcg cccgccgcgg tcgcgatctt cgaagaccgc ggcgttaagg
     3721 tcgagtttca gcccggtctc ggcaaggaca aggagaagct tgccgagacg atcaacggct
     3781 tcgacgggct cgccatccgc tctgcgacca aggtaacggc gaaaatcctc gaacgggcga
     3841 aaagcctcaa ggtgatcggc cgcgccggca tcggcgtcga caatgtcgac ataccggctg
     3901 cgaccgcgcg cggcatcatc gtgatgaaca cgccgttcgg caactcgatc acgaccgccg
     3961 agcacgcgat cacgctcatg ctgtcgctgg cacggcaaat tcccgaagca gacgcgtcga
     4021 cgcgcgccgg caaatgggag aagaacaagt ttctcggcgt cgagatgttc ggaaaaaccc
     4081 tcggcatcat tggctgcggc aacatcggct cgatcgtcgc cgaccgcgcg atcgggctga
     4141 ggatgaaggt gatcgcctac gatccgtacc tgtcggccga gcgcgctctc ggtctcgggg
     4201 tgggaaaggt cgagctcgag cagctgctgc gccgggcgga cttcattacc ctgcataccc
     4261 cgctcactga caagacccgc aacattatca gccgggaatc cctcgctttg acgaagaagg
     4321 gggtccgcct gatcaattgt gcccgcggcg agctcgtcga cgaggcggcg ctgttcgatg
     4381 cgcttaccgc gaggcacgtc gccggcgccg ccctcgacgt gttcgtcgag gaaccggcga
     4441 cagcaagccc gctgttcgcg ttgcccaacg tagtgtgcac gccgcatctc ggcgcctcga
     4501 cgacagaggc gcaggagaac gtggcgctcc aggtcgccga gcagatgtcc gactatctga
     4561 tccgcggcgc catcaccaac gccctgaact tcccctcgat cagcgccgag gaagcgccga
     4621 aactcaagcc cttcgtggcg ctggcggaga agctcggctc gttcgccggc cagctcaccg
     4681 agaccggcat caaacaggtg cagctgtcct acgaaggcgc agtcgcgcag atgaacacga
     4741 gggcgctcac ctcggcggcg atcgccggcc tgctgcgccc gatgctgcag cacgtgaacg
     4801 tggtctccgc accgatcgtt gcaaaggagc gcggcatcat cgtcgaggag acgcgccgcg
     4861 aagcggaagg cgactacgag agtctgatca acgttgccgt cgtgaccggc cggcagacgc
     4921 gctcggtcgc cggtacggtc tacgccgacg gccggccccg catcgtcaac atcaagggca
     4981 tccgcatgga cgccgagttc ggcccgtcga tgctctacgt gaccaaccag gacaagcccg
     5041 gctttgtcgg ccgcttcgcg acaatcctgg cggccgccgg catcaacatt gcgactttcc
     5101 atctcggccg cgacaacgcg ggcggcaacg ccatcgccct ggtcgaggtc gatggcatgg
     5161 tcgcggccga cgtgctggca caggtgctcg aaatcccgaa cgtgcagcag gtcaaaccgt
     5221 tgcgcttctg aagtttcggc gccacggcgc cagctgtcgc aaagcggcaa attcgcgcaa
     5281 attccgtgca attgcagcgg cttggcgtcg caccacctgg ccggagggtt gttgctttgc
     5341 cttgcttcgc gggacgtcat ccagtatccg ggaccaaggc tgcggccggt atccaaccca
     5401 tatgagcatc catcggcctg gtggggaaag ttcctcatgg caaacgttgt cgtggtcggc
     5461 tcccagtggg gggacgaggg caagggcaag atcgtcgatt ggctgtcgga gcaggccgac
     5521 atcgtcgtca gattccaggg cggccacaac gccggccaca cgctggtgat cgacgggatc
     5581 acgtacaagc tctcgttgct gccgtccggc gtgttgcgac ctggcaagct gtcgatcatc
     5641 ggcaatggcg tggtgctgga cctgcacgcg ctcctcgaag agatcgagcg gctcaaggcg
     5701 cagaatgtgg ccgttacgcc ggacaatctg cggatcgccg agaacaccac gctgatcctg
     5761 ccgctccatc gcgagcttga cgcgttgcgc gaatcctcaa acgagatgac gcgcatcggc
     5821 acgacccgcc gcggcatcgg gccggcctac gaggacaagg tagggcggcg cgccatccgc
     5881 ctgatggacc tcgccgacgg cgccaccctt gatgccaaga tcgaacggct gctggcccat
     5941 cacaacgcgc tgcggcgcgg gctcggcctc gaagccctct cggcccgcgc catccgcgac
     6001 gacctgatgc aggtcgcgcc gcacgccttg ccgttcatgg acagggtatg gtcgctgctc
     6061 gagcagaaac gccgcgaggg caagcgcatc ctcttcgagg gcgcccaagg cgcgctcctc
     6121 gacgtggatc acggcactta cccctacgtc acgtcgtcga acacggtcgc cgcccaggcc
     6181 gccaccggct ccggcgtcgg accgaacgcg atcggctatg tgctcggcat ttgcaaggcc
     6241 tacactaccc gcgtcggtga aggcccgttc ccgaccgagc aggacaacga ggtcggccgt
     6301 gcgttgggca agcgcggcaa ggaattcggc gtggtgaccg gccgaccgcg gcgctgcggc
     6361 tggttcgacg ccgttttggt gcggcagacc gtgcgcaccg gcggcatcca gggcctggcc
     6421 ctcaccaagc tcgacattct cgacggtttc gacgaaatca aggtttgcgt gggctatcgc
     6481 ctggacgggc gtgagatcga ctatctcccc gcggctgagc acgcgcaggc ccgcgtcgag
     6541 ccgatttatg agaccatccc cggctggcgg gaaaagaccg cgcatgcgcg gtcctgggcg
     6601 gatttgccgg cgcaggctat caaatacgtc cgccgattgg aggaactgat aggctgtccc
     6661 gcagccatct tgtcgacgag tccggaacgc gaagacacaa tcctgatgca gaatccgttc
     6721 gagacataaa ccgagtgaaa atcgccgcaa ccgagcgtaa gctcaaccga tgaccgacta
     6781 tcatccgctc atcgcccgcg ccgtggaggg gctggacagg agcaccgggg aggctcgccg
     6841 ggcgctttac gaacgggcgc gcaacgcgtt ggtcgcgcaa ttgcgctcca accagccggc
     6901 gctgtcggag gcggatatca ccaaggagcg cctcgcactc gaagaagcta tccggagggt
     6961 cgaggcggaa gcggcgcgca agtcgcgcaa cgaatcgcga gcagagcagc gaacggagcc
     7021 gcgcgcagcc gccgcgcctg ccgccgcgcc tgaaggggct gcgcaggttc gccgcgcttc
     7081 aggggcgccg cggcgggacc gctccagtcc gcccccggcc gatctgccgc gcgccggatg
     7141 gaccgcggtg ctgcccagcg cgcgcgagcg gttgttgagc gggcggtcct cgctgaagaa
     7201 gcaaggggtc aaaggctttc gcgatgtcgt cggcgaagtg cacgatcttg gcgcggcgac
     7261 cgccaaagcg gcgcaagcgg cacgccacac gcgcgaagcc tttgagccgg aggcgccgca
     7321 atacccgccg gaagaacctt ccgcaccctc gcatcggttc gagccggagt tcgaccccga
     7381 ggagttgaac tcggtcgagt acgacacgcg gtcgcgcgac ctcgaaccgg cctacgagcg
     7441 ggaagacgag cacccggtcc ccgcagcacc ggtccgctac tcaccgccca gcgccgcgcc
     7501 gccggcggaa gaggaatatg aacggaaacg cccgccgatc tcctatggcg gcatggcgcg
     7561 acttctcgtg gtgctgatca tcctcgctgg cgtggtcgcg acgatattct ggcagtggtc
     7621 agcaatcacc ggtctctacc aatacgtcag ccatatcgga tcgaagccgc agacccaggc
     7681 cggccacgag acgccgtcgg cgcagcccaa attctctggt cgcgttccgc aggaacaaag
     7741 ctccgggcag gcaccgggca cgtcggcgcc gagtgcgcag acggccccgg ccgtggcgca
     7801 gcgcatcgtg ctctacgagg aggacccgaa cgatcagcag ggtcgacgct atgtcggctc
     7861 cgccatctgg cggacggaga ccatatcgcc gggtccgggg cttgctcccg agctggccat
     7921 ccgtgcggac gtggaaatcc cggaacgtag aatcaccgtt acctggtcgc tgcgccgcaa
     7981 taccgacaag gcgctgccgg caagccacac gatcgagatc atgttcaacc ttccggcgga
     8041 ttttcccggc ggcggcatcg ccaacgtacc cggcatcctg atgaagcagg ccgagcaggc
     8101 gcgcggcacc ccgctctccg gactcgccgt caaggtgacc aacggcttct tcctgatagg
     8161 gctttccgcg gtcgacaccg acgttcagcg caacatgcaa ctgctcaagg accgatcgtg
     8221 gttcgatatc ccggtcgtct acaccaacgg cggccgcgcc atcctggcga tggagaaggg
     8281 cccgcccggc gaccgcgcct tcggcgaggc tttcgccgcc tgggaaaaga agtgagccgt
     8341 ccaggctcga cgtcggtcgc gggagtgggg atgttgggag caacagcgaa tagctcggcc
     8401 gacgcgttgg cgctgaaggc caagccgcac gctttcatcg cttcggcgct acgtacgctc
     8461 gaaaccgagc gcgagggtgt cgcggcgctg gcggccgcca tgtctgacgg gctggggccg
     8521 cgctttgtcg ccgccgtcga cacgatccgc gcggcccgcg gccgcgtgat cgtgaccggt
     8581 atgggcaagt cgggccacgt cgcccgcaag atcgccgcga ccctcgcctc cacgggaacg
     8641 ccggccttct tcgtgcatgc cgccgacgcg agccacggcg atctcggcat gatcacgtca
     8701 gacgacgtga tgctggtgct gtcatggtcc ggcgagaccg aggaacttaa ggacctgatc
     8761 aactattcgc gccggttccg catcgccctc atcgccgtca ccgtcaatgc cgacagcacc
     8821 ctgggcaaat ccgccgacat cgtgctggtg ctgccgcagg cgcgcgaagc gtgtccgcac
     8881 aatctcgcac ccacgacctc atcgctgatg cagctcgcgc tcggcgacgc gctggccatc
     8941 gcgctgctcg aaagcagggg atttactgcc gtcgatttcg gcgtgtttca tccgggcggc
     9001 aagctcggcg cggcgttgaa gttcgtccgc gatgtcatgc acccgggctc ggctgttccc
     9061 ttgatcgcgt gtgacgcgct gatgtcggaa gcgatcgtgg aaatgtcggc caagggcttt
     9121 ggctgcgtcg ccgttaccaa cggcgatggc cggctcctgg gcgtcatcac cgacggcgac
     9181 ctgcgccgcc acatgcgcga cgatctgctg cgggcgccgg tcggcgaggt gatgacggca
     9241 tcgccgaaaa cggttcggcc cgggcaattg gccagcgagg ctctggaact tatcaattcc
     9301 ttgaagatca cggcgctgat cgtggtggaa agcgaccggc cggtcggcat cgtgcatttc
     9361 cacgatctct tgcgcgccgg cgtcgcctga gccgcccggc ccatggccaa acggatgaat
     9421 ttcggccgaa agcaatagtt cgtgtcgtgg ccggacttgt accgacttgt tccggccatc
     9481 caggtcttcg ttttggcgtg ccattcagac gtcgacgccc acgacaaacg cgggcacgac
     9541 gattgcacgc gatctcataa cgcgccggcg ctagtagagg ccgccccgct gcacggcgtt
     9601 cggtgcgttg gccgactgct cctgagccgg gatcggcgca gcgtccgtct tcacgtccgc
     9661 agcggcaggc ttcacgtcgg tggcgaccgg ccttgcagca acattgcttg gctgcccgtg
     9721 ggcgacgaac tcttcatagc caggtgcccc ggggcgcggc ggaacgtcgt cgggcatgcc
     9781 gccggcccag cgcggccagt gatcggccac atatccggaa aacgagctgc aggaacc
//
LOCUS       DATMQB010000207         2106 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_688063, whole genome shotgun sequence.
ACCESSION   DATMQB010000207 DATMQB010000000
VERSION     DATMQB010000207.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2106)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2106)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2106
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_688063"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1404)
                     /locus_tag="VNY79_06330"
     CDS             complement(<1..1404)
                     /locus_tag="VNY79_06330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HWX72096.1"
                     /translation="MTARTRSTTRSPAERLAAGRPLLLSGVADGAEGLVLADLARSIA
                     AGRAPPPVSLAVVCRDGQRMAALARALAFFAPDVEVLEFPAWDCLPYDRVSPHPGVVA
                     QRMTALARLARVKGRERPAVALTTVNAILQRVPPREVIARQSLSAAPGNLLPMAGVTQ
                     WLELNGFNRAATVREPGDYAVRGGIVDLFAPGMAAPVRLDFFGDTLETIRSFDPETQR
                     TTEELRALDLVPMAEFQLTTDTIRLFRTGYVAEFGAAGPDDTLYEAVSEGRRTAGMEH
                     WLQLFHHRLETLFDFLAGTPLAVEPLAEEAAHERLAQIADYYQARKDALDQAGAGAPY
                     KPLPPGRLYLSEGEWRDRLEQSALARLSPFTAPEGTTDAVEIAAHAGRNFVAERSELG
                     SNVFEAVKKHVEGLQAARKRVVIALWSEGSRERMGHVLAEHGLLNLTPVASWPQALAL
                     SRPEIALAVLGVETGFET"
     gene            complement(1401..1703)
                     /locus_tag="VNY79_06335"
     CDS             complement(1401..1703)
                     /locus_tag="VNY79_06335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015952345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase assembly factor 2"
                     /protein_id="HWX72097.1"
                     /translation="MTERSSEGLDERRRKVLFRAWRRGVREIDLMVGRFADAHIATLD
                     AAALDDFERLIEAPNAELYAWVVGTEIATADYDTAVLAKLRAFHMGTPTMRAGEER"
     gene            1921..>2106
                     /locus_tag="VNY79_06340"
     CDS             1921..>2106
                     /locus_tag="VNY79_06340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72098.1"
                     /translation="MRPPVLNPLFASLSALPGIGPKLEKLFGRLIGRGGEPPRLIDLL
                     FHMPTGYVDRRNQPKLSA"
BASE COUNT          312 a          728 c          755 g          311 t
ORIGIN      
        1 ggtctcgaag cctgtctcga cgccgagcac ggcgagcgcg atctccggcc gcgacaaagc
       61 gagcgcctgc ggccaggaag cgaccggcgt gagattgagg agcccgtgct cggcgagcac
      121 gtggcccatg cgctcgcgcg agccctcgct ccacagcgcg atgacgacac gcttgcgggc
      181 cgcctgcagc ccttcgacgt gcttcttcac cgcctcgaag acgttgctgc cgagctcgct
      241 gcgctcggcg acgaaattcc gtccggcatg cgcggcgatc tccaccgcat cggtggtgcc
      301 ctcgggagcg gtgaatggcg acaggcgggc cagcgccgat tgctccaggc ggtcgcgcca
      361 ttcgccttcg ctgaggtaga gccggcccgg cggcagcggc ttatagggag cgccggcgcc
      421 ggcctgatcg agcgcgtcct tgcgcgcctg atagtagtcg gcgatctgcg ccaggcgctc
      481 gtgggccgcc tcctcggcga gtggctcgac cgcgagcggc gttcccgcga ggaagtcgaa
      541 cagcgtttcc agccgatggt ggaacagctg cagccaatgc tccatgccgg cggtgcggcg
      601 gccctcgctc actgcctcgt agagcgtgtc gtcggggccg gcggcgccga actccgcgac
      661 atagccggtg cggaacaggc ggatggtgtc ggtggtgagc tggaattccg ccatgggcac
      721 gaggtcgagc gcgcgcagct cttcggtcgt gcgctgggtt tccggatcga agctgcggat
      781 cgtctccagc gtgtcgccga agaaatcgag ccgcaccggc gccgccatgc cgggggcgaa
      841 caggtcgacg atgccgccgc gcaccgcata gtcgcccggc tcgcgcacgg tggcggcgcg
      901 gttgaagccg ttgagctcaa gccattgcgt gacccccgcc atcggcagga ggtttcccgg
      961 cgccgccgaa agcgattggc gggcgatcac ctcgcgcggc ggcacgcgct gcaggatggc
     1021 gttgacggtc gtgagcgcga ctgccgggcg ctcgcgcccc ttgacgcggg cgaggcgcgc
     1081 gagcgcggtc atgcgctgcg ccaccacccc cggatgcggc gacacgcggt cgtacggcag
     1141 gcaatcccag gcgggaaatt ccagcacctc gacgtcgggc gcgaagaacg caagcgcgcg
     1201 ggcgagcgcg gccatgcgct ggccgtcgcg gcagaccaca gcgaggctga ccggtggcgg
     1261 cgcccggccg gcggcgatgg accgcgccag atccgcgagc acgagccctt cggcgccgtc
     1321 ggctacgccg gagaggagga gcggccggcc agcggcaagg cgctcggccg gcgatcgcgt
     1381 ggttgatctc gtccgtgcgg tcaccgttcc tccccggcgc gcatcgtagg ggtccccatg
     1441 tgaaacgctc tgagctttgc gagcacggcg gtatcgtagt ccgcggtcgc gatctcggtg
     1501 ccgacgaccc aggcgtacag ctctgcgttg ggcgcttcga tcaggcgttc gaagtcgtcg
     1561 agcgccgcgg cgtcaagcgt ggcgatgtgg gcgtcggcga aacggccgac catcaggtcg
     1621 atctcgcgca cgccgcgccg ccaggcccgg aacaagacct tgcgccgcct ctcatccaat
     1681 ccctcgctcg accgctcggt catcgccgcg ctccaacgcc aaaagcccgg acgcggccgg
     1741 gcgaggcgta tatagagggc gaggcagggg atgtcagcgc cgagccgtcc agtttcaccg
     1801 tcattccggg acggcgcgaa agcgccgggc ccggtatcca tatccgcgcg cattgaggtt
     1861 atggattccc ggttcgcggc ctctggccgc gccccggaat gacgaagcga tgagactcgc
     1921 atgcgcccgc cggtgctcaa tccgctgttt gcttcgctct cagcgctgcc cggcatcggg
     1981 ccgaagctgg aaaagctgtt cggccggctg atcggacgcg gcggcgagcc gccgcgcctc
     2041 atcgatctgc tgtttcacat gccgacggga tacgtcgacc ggcgcaacca gccgaagctc
     2101 tccgcc
//
LOCUS       DATMQB010000208         4406 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2548947, whole genome shotgun sequence.
ACCESSION   DATMQB010000208 DATMQB010000000
VERSION     DATMQB010000208.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4406)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4406)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4406
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2548947"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..513
                     /locus_tag="VNY79_06345"
     CDS             <1..513
                     /locus_tag="VNY79_06345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HWX72099.1"
                     /translation="TIKANFPTRISFQVTSKIDSRTILGEQGAEQLLGQGDMLYMAGG
                     GRISRVHGPFVSDEEVEKVVRHLKSQGVPQYLEAVTAEAPDEDGDQAVFDATAMGAEE
                     GTDLYQQAVQVVTRDRKASTSYIQRRLQIGYNRAASLMERMEKEGIVGQPNHAGKREI
                     LVEADEQDRY"
     gene            627..1457
                     /locus_tag="VNY79_06350"
     CDS             627..1457
                     /locus_tag="VNY79_06350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane lipoprotein carrier protein LolA"
                     /protein_id="HWX72100.1"
                     /translation="MAARLGRGASIIVVTMACGVLTAASVLAQSVPLPTPDPRAKTGA
                     TSAPPAIVHAPAPSAATAAAAPAAAPRGFFPFSFSLDKGASAKATAFDAKQRALLEKI
                     SGYLSGVQTLVGSFVQVGPDGRRVEGSFYIQKPGKVRFAYNPPSPIEIIADGSAVVVR
                     DRSLDTQDFYPLSQTPLRYLLADHIDLLRDTDVVSVSADDTFITVVIEETKLVVGTNR
                     LMIMFDAKNLQLKQWTVTDPQGLDTTVAVYNVDSGRKPDPDLFVINYQPDPRSQMPHR
                     "
     gene            complement(1461..2720)
                     /locus_tag="VNY79_06355"
     CDS             complement(1461..2720)
                     /locus_tag="VNY79_06355"
                     /EC_number="1.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HWX72101.1"
                     /translation="MQNRPQRPQVLIVGAGFGGLEATKALARADVDVTLVDAYNHHCF
                     QPLLYQVATAALSPADVAWPIRAIMRKQKNVRVIMARVTGIDVAARRVHTSELDLSYD
                     YLVLATGSTHSYFGRDDWEPFAPGLKHIADATEIRRRFLLAFERAEVVEDAAERARLL
                     TFVIVGGGATGVEMAGAIAEVARRTLQHDFRRIDPRSSRIVLIEAGPRLLLAFSTALS
                     DYAARSLGHMGVEVELGRKVIGCDARGVSLDGGRIEAATVIWAAGVIASPAATWIGAE
                     HDRAGRIKVNADLGVPGRPEIFAVGDTAAAFDREGRPVPGIAPAAKQMGRYVGRVIAA
                     RVQGRPPPPPFAYRHLGDLATIGRKSAVVKLGPVQLTGFIGWLFWSAVHIYFLIGLRN
                     RFVVALNWLWSYVTFQRGARLIGAALR"
     gene            2852..3667
                     /locus_tag="VNY79_06360"
     CDS             2852..3667
                     /locus_tag="VNY79_06360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HWX72102.1"
                     /translation="MPITVTTWNINSVRLRINLVARFIKAVRPDILCLQETKCPDDRF
                     PRKRFRRLGYENVALNGQKGYHGVVVLSRLPFESSAVQAYCGKSDCRHISIVLGERAG
                     LKDPITLHNFYVPAGGDIPDPAVNEKFAHKLAFLDEMHACPTLRPAPSERAIIVGDLN
                     VAPLACDVWSHKQLLKVVSHTPLECEKLLGLQKAGNWIDAVRSFVPEPMNIFTWWSYR
                     SPDWTRSDRGRRLDHIWVAPALADRLSAVTVSKDSRGWSRPSDHVPVTATLEV"
     gene            complement(3682..4155)
                     /locus_tag="VNY79_06365"
     CDS             complement(3682..4155)
                     /locus_tag="VNY79_06365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HWX72103.1"
                     /translation="MSIEEDIALLERVPMLRRLGGPALRMLAIGGESLRVGAGEQLFR
                     AGDSADGAYIVQQGSFRLRPERAGQNEVIAGPGTLIGEAALLSETQRPATATAREDST
                     VMRLPRAMFLKMLEGYPDAARRLREIILSRNDQWTREVENVRDALARGTKPLPRS"
     gene            complement(4166..>4406)
                     /locus_tag="VNY79_06370"
     CDS             complement(4166..>4406)
                     /locus_tag="VNY79_06370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HWX72104.1"
                     /translation="KGNKVRLTEKETSILRYLYRAGQGPVSRETLLQEVWGYNSGVTT
                     HTLETHIYRLRQKIEKDAAAPAILVTEAGGYKLVP"
BASE COUNT          735 a         1492 c         1453 g          726 t
ORIGIN      
        1 acgatcaagg ccaacttccc gacccgcatc tccttccagg tgacctcgaa gatcgacagc
       61 cgcaccattc tcggcgagca gggcgccgag cagctgctcg gccagggcga catgctctac
      121 atggccggcg gcggccgcat cagccgcgtg cacgggccgt tcgtctccga cgaggaggtg
      181 gagaaggtgg tgcgccatct caagtcgcaa ggcgtgccgc aatacctcga agcggtcacc
      241 gccgaggccc cggatgagga cggcgaccag gcggtcttcg acgcgaccgc gatgggcgct
      301 gaagagggaa ccgacctcta tcagcaggcg gtgcaggtcg tcacccgcga ccgcaaggcc
      361 tcgacgagct atatccagcg ccggctgcag atcggataca atcgcgccgc ctcgctcatg
      421 gagcgcatgg agaaagaggg catcgtcggg cagcccaacc acgccggcaa gcgggaaatc
      481 ctcgtcgaag ccgacgagca ggatcgctat tgagaatcgg ccgtttggcc tttaagccgg
      541 atcggtcagc cgcgaatccg ccatatcccg cggttagcgg tctggcttgg ccaggggcgt
      601 gcgcgacggc gtacggggag agggacatgg cggcacggtt ggggcgaggc gccagcatca
      661 ttgtcgtgac gatggcttgc ggcgtgctta ccgccgcttc cgtcctcgcg cagagcgtac
      721 cgctgccgac ccccgatccc cgcgccaaga cgggcgccac atcggcgccg ccggcgatcg
      781 tgcacgcgcc ggcgcccagt gccgcgaccg cggctgccgc acccgcggcg gcgcccagag
      841 gatttttccc cttctcgttc tcgctcgaca agggtgcgtc ggcaaaggcg accgctttcg
      901 atgccaaaca gcgcgcgctt ctcgaaaaga tcagcggcta tctctccggg gtgcagacgc
      961 tggtcgggag tttcgtgcag gtcggcccgg acggccggcg cgtcgagggg tcgttctaca
     1021 ttcagaaacc gggcaaggtg cgtttcgcct acaatccgcc gagcccgatc gagatcattg
     1081 ccgacggttc ggcggtcgtg gtgcgcgacc gttcgctcga cacgcaggat ttctatccgc
     1141 tgtcgcagac gccgctgcgc tacctgctcg ccgaccatat cgatcttctg cgcgacaccg
     1201 acgtcgtcag cgtatcggcc gacgatacct tcatcacagt ggtcatcgag gagaccaagc
     1261 tggtggttgg caccaaccgg ctgatgatca tgttcgacgc caagaacctg cagctcaagc
     1321 aatggaccgt caccgatccg caggggctcg acacgaccgt cgccgtctac aatgtcgact
     1381 ccggccggaa gcccgatccc gatttgttcg tcatcaatta ccagccggat ccacggtcgc
     1441 agatgccgca tcgctgaagt tcagcgcaac gcggcgccga tcagccgggc gccgcgctgg
     1501 aaggtgacgt agctccatag ccagttgagc gcgaccacga agcggttgcg cagcccgatc
     1561 aaaaaataga tgtggacggc gctccagaac agccagccga tgaagccggt gagctgaacg
     1621 gggccgagct tcaccacggc ggacttgcgg ccgatggtgg cgaggtcgcc gagatgccgg
     1681 taggcgaacg gcggcggcgg cggccggccc tgcacccgcg ccgcgatgac tctgcctacg
     1741 tagcggccca tctgcttggc cgccggcgcg atgccgggaa ccgggcggcc ttcgcggtcg
     1801 aaggcggctg ccgtatcgcc gacggcgaag atctccggcc ggccgggaac gccgagatcg
     1861 gcgttcacct tgatgcgccc ggcgcgatcg tgctcggcgc cgatccacgt tgccgcgggc
     1921 gaggcgatca cgcccgcggc ccagatcact gtcgccgcct cgatgcggcc gccgtccagc
     1981 gaaactccgc gggcatcgca gccgatcacc ttgcggccga gctcgacctc gacgcccatg
     2041 tggccaagcg aacgggcggc atagtccgat agggctgtgg aaaacgccag cagcaggcgt
     2101 ggccccgctt cgatgagcac gatgcgcgaa ctgcgcggat cgatgcggcg gaagtcgtgc
     2161 tgcaaggtgc ggcgcgccac ttcggcgatc gcgccggcca tctccacgcc ggtggcgccg
     2221 ccgccgacaa tcacgaaggt gagaaggcgc gcccgctcgg ccgcatcttc gaccacctcc
     2281 gcgcgttcga aggcgagcag gaaccgccgc ctgatctcgg tcgcgtccgc gatgtgcttg
     2341 aggcctggcg cgaacggttc ccaatcgtca cggccgaagt aggaatgggt cgatcccgtg
     2401 gcgagcacga gatagtcata ggaaagatca agctcgctcg tgtgcacacg ccgtgccgcc
     2461 acatcgatcc cggtgacccg cgccatgatc acgcggacgt tcttctgctt gcgcatgatg
     2521 gcgcggatcg gccaggcgac gtcggcgggc gacagcgccg cggttgcgac ctgatagagc
     2581 agcggctgaa aacagtggtg gttgtaggcg tcgacgagcg tcacgtcgac gtcggccctg
     2641 gcaagcgcct tggtcgcttc gagcccgcca aaacctgcgc ctacaattag cacctgcggc
     2701 cgctgcggtc tgttctgcat gccggcctcc gccccttcga tatagggtag cgcgagacaa
     2761 gtggggagtt ccgccgcacc tctgggcgcg ggttcaggct tgtgtccgcg gtcgcggcgc
     2821 cgcatatgac ttcggttacc cgcgcgaccg catgccgatc accgtcacca cctggaacat
     2881 caattcggtg cgcctgcgca tcaatctcgt cgccaggttc atcaaggccg tccgccccga
     2941 catcctctgc ctgcaggaga ccaagtgccc ggacgacaga ttcccgcgca agcgtttcag
     3001 gcggctgggc tacgagaacg tggcgctcaa cggtcagaag ggctatcacg gcgtcgtcgt
     3061 gctctcgcgg ctgccgttcg aatcgagcgc ggtacaggcg tattgcggca agagcgactg
     3121 ccgccacatc tcgatcgtgc tcggcgagcg cgcggggctc aaggatccga tcacgctgca
     3181 taacttctac gtgcccgcgg gcggcgacat tcccgatccc gcggtcaacg aaaaatttgc
     3241 ccacaagctc gctttcctcg acgagatgca cgcctgccct accttgcgcc cggcgccgtc
     3301 ggagcgcgcg atcatcgtcg gcgacctcaa tgtggcgccg ctcgcatgcg acgtctggag
     3361 ccacaagcaa ttgctcaagg tcgtctcgca cacgccgctc gaatgcgaga agcttctcgg
     3421 cctgcagaag gcggggaact ggatcgatgc cgtgcgcagc ttcgtgccgg agccgatgaa
     3481 tattttcacc tggtggagct accgctcgcc ggactggacc cgttccgatc gcggccgccg
     3541 gctcgatcac atctgggtcg cgccggcgct cgccgaccgc ttgtcggcgg tcacggtgtc
     3601 aaaggattcg cgcggctggt cgcgcccctc cgaccatgtg ccggtgacgg cgacgctcga
     3661 ggtttagctg gggcgcgcag gctacgaccg gggtagcggc ttggtgccgc gcgcgagcgc
     3721 gtcgcgcacg ttttccactt cgcgcgtcca ctggtcgttg cgcgacagga tgatttcgcg
     3781 caggcgccgc gccgcgtccg gatagccttc gagcattttc aggaacatcg cgcgcggcag
     3841 acgcatgacg gtcgaatcct cgcgcgcggt ggcggtggcc ggccgctgcg tctcggagag
     3901 gagggccgct tcgccgatca gggtccccgg cccggcgatg acctcgtttt ggccggcccg
     3961 ctccggccgc agccggaacg aaccctgctg cacgatgtag gcgccgtcgg cgctatcgcc
     4021 cgcccggaac aactgttcgc cggcgccgac tctcaggctt tcgccgccga tcgccagcat
     4081 gcgcaacgcc gggccgccaa ggcggcgcag catcggcacc cgctcgagca aggcgatgtc
     4141 ttcctcgatg ctcatggcgt cgcgatcacg gcaccagctt gtagccgccc gcctcggtaa
     4201 ccaggatcgc gggggcggcg gcgtcttttt cgatcttctg ccgtagccgg tagatgtggg
     4261 tctccagcgt gtgcgtcgtc actcccgaat tgtagcccca gacctcctgc agcagcgtct
     4321 cccgcgatac cggcccttgg ccggcgcggt agagataacg caggatcgac gtctccttct
     4381 cggtgaggcg gaccttgttg cccttt
//
LOCUS       DATMQB010000209         5404 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1316420, whole genome shotgun sequence.
ACCESSION   DATMQB010000209 DATMQB010000000
VERSION     DATMQB010000209.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5404)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5404)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5404
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1316420"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            160..1308
                     /gene="dapE"
                     /locus_tag="VNY79_06375"
     CDS             160..1308
                     /gene="dapE"
                     /locus_tag="VNY79_06375"
                     /EC_number="3.5.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009014 - succinyl-diaminopimelate
                     desuccinylase activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinyl-diaminopimelate desuccinylase"
                     /protein_id="HWX72105.1"
                     /translation="MTADPVTIARDLIRCRSVTPEEGGALDYLQEVLGQAGFAVHRAT
                     FAEPGTAPVDNLYARTGIERPNLMFAGHTDVVPPGDETAWKHPPFAGEIAADALYGRG
                     AVDMKGGIACFVAAALDYLNANGGKPNKGSLSFLITGDEEGVAVNGTVKLLQWAAARG
                     ETFDHCIVGEPSSHEVLGDTIKVGRRGSLNGTLIVTGRQGHVAYPDRADNPIRGMAVL
                     IAALQGPLDEGSEHFDPSNLEFTTVDVGNRTVNLIPGEARARFNIRYNDRHSAIALKT
                     LIERRAQAAAGGRVRYALEWQPSNADVFLTKPGPFTELASAAVAEVTGRKPKLSTTGG
                     TSDARFIKDYCPVLEFGLVGQTAHQVDECAPLGELVALTAIYRRIIEC"
     gene            complement(1363..2100)
                     /gene="truA"
                     /locus_tag="VNY79_06380"
     CDS             complement(1363..2100)
                     /gene="truA"
                     /locus_tag="VNY79_06380"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011512060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HWX72106.1"
                     /translation="MPRYKLAIEYDGTPFVGWQVQDNGPSVQGVIANAIAAFTGERAT
                     VSGAGRTDAGVHALGQVAHVDLAKDWDGDTVRDAINAHLRPHPVAVLTAERVAENFDA
                     RFSATKRHYVYRIVNRRADLALEQNRAWRIARPLDDAAMHTAAQKLVGRHDFTTFRAA
                     ECQARSPVKTLDQIDVVRDGEEVRVLAAARSFLHHQVRSMVGSLVHVGEGKWSADDLG
                     AALAGRDRSSCGQVAPPQGLYLVRVEY"
     gene            complement(2108..3031)
                     /gene="fmt"
                     /locus_tag="VNY79_06385"
     CDS             complement(2108..3031)
                     /gene="fmt"
                     /locus_tag="VNY79_06385"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004479 - methionyl-tRNA formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006431 - methionyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HWX72107.1"
                     /translation="MALRLVFMGTPDFAVPTLLEIIGSGHEVVAVYTRAPQPAGRGMA
                     LRPSPVAREAERFALPVFTPRALRNAEAAPTMRAHGADAAVVVAYGLILPKAILDAFS
                     LGAFNLHASLLPRWRGAAPIHRAVMAGDAETGVMVMKMEEGLDTGPIAMAERAPIGPD
                     ATTGDLHDELKRRGASLMVRALAALEKGALQLTPQPASGVTYANKIGKDETHIDWTRP
                     WNEVHDHCRGLSPFPGAWSELPGAGRVKVLRTTKGTGDGPPGRVLDDRLTVACGAGAV
                     RLLELQRAGRQPMPTDEFLRGTPVARASVLS"
     gene            complement(3032..3565)
                     /locus_tag="VNY79_06390"
     CDS             complement(3032..3565)
                     /locus_tag="VNY79_06390"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007814989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042586 - peptide deformylase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HWX72108.1"
                     /translation="MTVREIIKLPDKRLRLVSEPVKRIDASLRKLVEDMFETLYGAPG
                     IGLAGIQVGVAKRVIIMDLSKKDDTRKPEVFINPEITWASEEKSSYEEGCLSIPEYYE
                     EVERPAVVKVKYLDLEGKAREVEAGGLLATCLQHEIDHLNGILFIDHISKLKRDRITK
                     KFAKAAKTAKVTKKVEA"
     gene            4284..5396
                     /gene="rmuC"
                     /locus_tag="VNY79_06395"
     CDS             4284..5396
                     /gene="rmuC"
                     /locus_tag="VNY79_06395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016848084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA recombination protein RmuC"
                     /protein_id="HWX72109.1"
                     /translation="MTESLPIVAVLAALLAGGALVATAVVLWRTHSPGRPQEAVLADL
                     TRQHTDAAARLEAMIRMLGDRQSQLQHAVNERLDSVSHRLGDSLEKTTQHTSENLQKL
                     NERLAVIDSAQKNITALATQVSSLQSVLGNKQQRGAFGQGRMEIIVRDGLPKSCYEFQ
                     YTLSNKLRPDCAVFLPDRRPLVIDSKFPLEAVSAYRDAKTDDERRQAAARARTDVLKH
                     VADIAEKYLIPGETQDLAMMFVPSESVYAELHDGFDDIVQKAFRAKVVIVSPSLLMIA
                     IHVIQQIQKDQRMREAASRIQAEVGHLIDDVRRMSERVAKLKQHFGQANEDVRQIAIS
                     TEKIEQRGDRIKDVDFEEDGVGNIIPAPIPRLQAGE"
BASE COUNT          905 a         1811 c         1771 g          917 t
ORIGIN      
        1 gggctgggat agcggcggcg acaatccgac cgttctttgg acggtcgtcg cgatcccctt
       61 tctggtgctt ctccttgccc tcatcgtcga gctgggcttc cgcaagggta cgcccggacc
      121 gaaccaatat ggtcccgacc cactggcgac cagttgagca tgaccgccga tcccgtcacc
      181 atcgcccgcg acctcatccg ctgccgctcg gtgacgccgg aggagggcgg cgcgctcgac
      241 tatttgcagg aggtgctggg gcaggcggga tttgccgtcc accgcgccac ctttgccgaa
      301 cccgggacag cacctgtcga caatctctac gcgcggaccg ggatcgagcg tcccaatctg
      361 atgttcgccg gacacaccga cgtcgtgccg cctggcgacg agacggcctg gaagcatccg
      421 ccgtttgccg gcgagattgc cgccgacgcg ctttatggcc gcggcgccgt cgacatgaag
      481 ggcggcatcg cgtgctttgt cgccgccgcc ctcgattatc tcaatgccaa tggcggcaag
      541 cctaacaagg gctcgctctc ctttttgatc accggcgacg aggagggtgt tgcggtcaac
      601 ggcacggtca agctgctgca gtgggcggcc gcacgcggcg agacattcga ccactgcatt
      661 gtcggcgagc ccagcagtca cgaggttctt ggcgatacca tcaaggtcgg ccggcgcggc
      721 tccctcaacg gcacgctcat tgtcaccggg cgccagggcc acgtcgccta tcccgatcgc
      781 gccgacaacc cgattcgcgg catggccgtg ctcatcgccg cgctgcaggg gccgctcgac
      841 gaaggcagcg agcatttcga tccgtccaac ctcgaattca cgacggtcga tgtcggcaat
      901 cggaccgtca acctcatccc gggcgaggcc cgcgcgcgtt tcaatatccg ttacaacgac
      961 cggcacagcg cgatcgcgct caagacactg atcgagcgcc gcgcgcaggc cgcggccggc
     1021 ggccgcgtgc gctatgccct ggagtggcag ccctcgaatg ccgatgtgtt cctcaccaag
     1081 cctggcccat tcaccgagct tgcttctgcc gcagtcgccg aggtgaccgg gcgcaagccg
     1141 aagctctcga ccaccggcgg cacctcggac gcccgcttca tcaaggacta ctgcccggtg
     1201 ctcgagttcg gcctcgtggg gcagaccgcg caccaggtcg acgaatgcgc gccgctcgga
     1261 gaactcgttg cgctgacggc aatctaccgg cgcatcatcg agtgctaatt ggcttgaacg
     1321 ccggccgccc gcaggcggcg tggcccgtcc cggcgcgacg cttcaatact cgacccgcac
     1381 cagataaagc ccctgcggcg gcgccacttg gccgcaggag ctgcggtcgc ggccggccag
     1441 tgccgcgccg agatcatcgg cgctccattt gccttcgccg acatgcacca gtgagccgac
     1501 catcgagcgc acctgatggt gcaggaacga acgcgccgcg gcgaggacgc gcacctcctc
     1561 gccgtcgcgt acgacgtcga tctggtcgag ggtcttgacc ggcgatctcg cctggcactc
     1621 ggccgcgcgg aaggtggtga agtcgtgccg accgacgagc ttttgcgcgg cggtgtgcat
     1681 ggcggcgtca tcgagcggcc gcgcgatgcg ccaggcgcga ttctgctcca gcgcgaggtc
     1741 ggcgcggcgg ttgacgatgc ggtagacgta gtgccgcttc gtcgccgaga agcgcgcgtc
     1801 gaagttttcg gcgacacgtt cggccgtcag cacggcaacg ggatgcgggc gcaggtgggc
     1861 gttgatcgca tcgcgcacgg tgtcgccgtc ccaatccttg gcaagatcga catgcgccac
     1921 ctggccgagc gcgtgcacgc cggcgtcggt gcgccccgcg ccggacacgg tggcccgctc
     1981 gcccgtaaag gcggcaatgg cgttggcgat gacaccctgc accgacgggc cgttgtcctg
     2041 cacctgccag ccgacaaagg gggtgccgtc gtattcgatg gcgagcttgt agcggggcat
     2101 ggcggagtca actcaggacg ctggcgcggg cgaccggcgt gccgcgcaaa aactcatccg
     2161 tcggcatcgg ctgccgcccg gcgcgctgca gctcgaggag ccgcacagcg cccgcaccgc
     2221 aggcaacggt caatctgtcg tcgagcacgc ggcccggcgg accgtcgccg gtccccttgg
     2281 ttgtgcgcaa aaccttgacg cgcccggcgc cgggcaattc cgaccacgcg ccgggaaagg
     2341 gcgacaggcc gcggcaatga tcatggacct cgttccacgg cctggtccaa tcgatgtgcg
     2401 tttcgtcctt gccgatcttg ttggcgtagg tcacgcccga agccggctgc ggcgtgagct
     2461 gcagcgctcc tttctcaagc gcggcgagcg cccgcaccat caggcttgcg ccgcgccgct
     2521 tgagttcgtc gtgcaagtcg ccggtggtcg catccggccc gatcggcgcc cgctcggcca
     2581 tggcgatggg cccggtatcg agcccttcct ccattttcat caccatcacg ccggtctcgg
     2641 catcgccggc catgaccgcg cgatggatcg gcgccgcccc gcgccagcgt ggcagcagcg
     2701 aggcatggag gttgaaggcg ccgagtgaaa aggcatcgag aatggccttc ggcaggatca
     2761 acccgtaggc aaccacgacc gcggcgtcgg ccccatgcgc gcgcatggtg ggcgccgctt
     2821 cggcgttcct cagcgctcgc ggggtgaaga ccgggagggc gaagcgttcg gcttcacgcg
     2881 ctacggggct cggccgcagc gccattccgc gaccagcggg ctgcggcgcc cgggtataga
     2941 ccgctacgac ctcatgaccg ctgccgatga tctcaaggag cgtcggtacg gcgaaatccg
     3001 gcgtccccat gaacaccagg cggagcgcca atcaggcctc caccttcttc gtaaccttcg
     3061 ccgtcttcgc cgccttggcg aacttcttgg tgatgcggtc gcgcttgagc ttggaaatgt
     3121 ggtcgatgaa caggatgccg ttgaggtggt cgatttcgtg ctggaggcag gtcgcgagca
     3181 ggccgccggc ctcgacctcg cgcgccttgc cctcgaggtc gaggtacttg accttcacca
     3241 ccgccggacg ctcgacctcc tcgtaatatt ccggaatcga caggcagcct tcctcgtagc
     3301 tcgatttttc ttccgaggcc caggtgatct ccgggttgat gaacacctcc ggcttgcgcg
     3361 tgtcgtcctt cttcgacaaa tccatgatga tgacgcgctt ggctacgccg acctggatgc
     3421 cggcaagccc gatgccgggt gcgccgtaca aggtttcgaa catatcttcg accagcttgc
     3481 ggaggctggc gtcgatgcgc ttgaccggct cggatacgag ccgcagccgc ttgtcaggaa
     3541 gctttatgat ctcgcgtacc gtcatggccg gcgatttaag tcgtgcttaa ggcgcggtca
     3601 atgcgcgcga ttattacgca aattgatgcg ctcccaaagt ccagggcgcc accctattct
     3661 cgctgcggcc gcggaatgtg gtcccaggca tccccttcaa tcttgcgtca ccccgttttc
     3721 ccgccaagat gggcctgtcg gccggtggta cgcttccatg tcatcaaaca gagcatggaa
     3781 cggcgtacag tggctagtgg tgcttttctc aacgcggcac cctgcgaaca gaaggagggt
     3841 ctagtgcgaa aggtcacgat gactttgact gcggcagcgc ttttgctggg aaccatggcc
     3901 ttgcaggcca gtgcgcaaaa ccagcagcgc ggcgctgcca gcatccatgc gctcaggaac
     3961 gcaaccccga tcgtcacgcc ggcggcgtgt tacgggggaa ccggctattg cggttgcggc
     4021 cccgattgga tcagcgcgtg ctccccccgt tgctgccgat gcgtaccctg ctggtgagcg
     4081 gcgggtcggc catcgttccg gaatgcttcg aggccgcctc tgcgaggcgg cctctcgctt
     4141 tgacctgagc gtcagttgcc ggcttcccgc gaccgggaag gccgtgtcgg ccgcgggatg
     4201 ggagctaccg cgtcgcggtg caagggctct aggcgggggt gcctgcatta ccagcttccg
     4261 cccgaatcgc gtagaagcgg cggatgactg agagcctgcc gatcgtcgcg gttctggccg
     4321 ccctcctcgc cggtggggcg ctcgtggcga cggccgtcgt gctgtggcgc acgcacagcc
     4381 ccgggcgccc gcaggaagca gtcctggccg accttacccg gcagcatacc gatgccgcgg
     4441 cgcggctcga ggcgatgatc cggatgcttg gcgaccgcca gtcgcagctg cagcatgcgg
     4501 tcaacgagcg cctggattca gtctcgcacc ggctcggcga ttcgctggag aagaccacgc
     4561 agcacacgtc ggagaacctg cagaagctca acgagcggct cgcggtcatc gacagcgccc
     4621 agaagaacat taccgcgctc gccacgcagg tcagctcgct gcaaagcgtg ctcggcaaca
     4681 agcagcagcg cggcgcgttc ggccagggac gcatggaaat catcgtgcgc gacggcctgc
     4741 cgaagagctg ctacgagttc cagtatacgc tttccaacaa gctgcggccg gactgcgcgg
     4801 tgttcctgcc cgaccggcgt cccctggtca tcgattccaa atttccgctc gaagcggtga
     4861 gcgcctatcg cgacgccaag accgacgacg aacggcgcca ggcggcggcg cgggcgcgga
     4921 ccgacgtgct caagcacgtc gcggacatcg ccgagaaata tctcatcccg ggcgagaccc
     4981 aggatctggc gatgatgttc gtgccgtcgg aatcggtcta cgccgagctg cacgacggct
     5041 tcgacgacat cgtgcagaag gcgttccgcg ccaaggtcgt catcgtttcg ccgtcgctgc
     5101 tcatgatcgc catccatgtc atccagcaga tccagaaaga ccagcgcatg cgcgaggccg
     5161 caagccggat ccaggcggaa gtcggccatc tgatcgacga tgtgcggcgc atgagcgagc
     5221 gcgtggccaa gctcaagcag catttcggcc aggccaacga agacgtgcgg cagatcgcga
     5281 tctcgacgga aaagatcgag cagcgcgggg accgcatcaa ggacgtcgat ttcgaggaag
     5341 acggcgtcgg caatatcatt cccgcgccga tcccgaggct gcaggcggga gagtaagcgg
     5401 gctc
//
LOCUS       DATMQB010000210         4681 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1317202, whole genome shotgun sequence.
ACCESSION   DATMQB010000210 DATMQB010000000
VERSION     DATMQB010000210.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4681)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4681)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4681
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1317202"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..420
                     /locus_tag="VNY79_06400"
     CDS             <1..420
                     /locus_tag="VNY79_06400"
                     /inference="COORDINATES: protein motif:HMM:NF018604.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1275 family protein"
                     /protein_id="HWX72110.1"
                     /translation="VLMLATAPATDADDWGGILAGAFGAMAMGAQSATVRLLMRGIPQ
                     TNVMTGNMTQLGIATTELLLAWRRRARDRDDLSSEREFLAVRSRLLVVLAIATGFLLG
                     AAAGAVGYAKAGLAGLPLAVVIVGALAVWVLVRERRA"
     gene            517..2076
                     /locus_tag="VNY79_06405"
     CDS             517..2076
                     /locus_tag="VNY79_06405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HWX72111.1"
                     /translation="MPERPEDIIAGKKRPFNGAEFLESLRDGREVYIYGERVKDVTTH
                     PAFRNSAASVALLYEALHDKAQKDVLTSLTDTGSGGYTHKFFRAARSREEVIAQRDAI
                     AAWARITYGWLGRSPDYKAAFLNTLGANAEFYGKFADNARTWYKRGQEAVLFLNHALV
                     NPPIDRNKAVEQVKDVYITVQKETDAGIYVSGAKVVATNSALTHYNFLGQNMGQEITD
                     PSMVVMFIAPMNTPGIKLICRPSYEFAAAATGSPWDYPLSSRFDENDAIFVFDNAFIP
                     WENVIIHRDIERLKNFYPQSGFFNGFTLQGCTRLSVKLDFIVGLLYKAARATGVEAFR
                     GVQAQIGEVIGWRNLFWSLTDAMAYNPVPWVDGAVLPNPRASSAYRLFMTEAYPAVRS
                     IVEKVIASGLIYLPSHARDFKNPEIDKYLAKYVRGSNNIDYKERIKTMKLLWDAVGTE
                     FGARHELYEMNYSGSHELIRLFPLQQAQGSGVLREMEALAEQCMADYDEDGWRHPAYR
                     DPGDVSVVGKK"
     gene            2269..3444
                     /locus_tag="VNY79_06410"
     CDS             2269..3444
                     /locus_tag="VNY79_06410"
                     /EC_number="2.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012330225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acyltransferase"
                     /protein_id="HWX72112.1"
                     /translation="MPEAVIVSTARTPIGRAYRGAFNMTHGAELGGHVVRYAVERAGV
                     DPGEVEDVILGCALPERATGGNIARQAALRAGLPVTVGGMTVNRFCSSGLQTIALAAQ
                     RIISGEASVIAAGGLESISLVQDGKTPPAPSEWMLEHKPDLYMPMIDTADNVAERYKV
                     SREAQDAYALESQRRTATAQQAKRFDSEIVPLPTTKKLVDKDTKAESFEPVTLKSDEG
                     NRPDTTLEGLAALKPVREGRYITAGNASQLSDGASACVLMEAKLAERRGLKPLGTFRG
                     FAVAGCEPDEMGIGPVFAVPKLLGRQGLKVGDIDLWELNEAFASQVLYCRDRLGISQE
                     RLNVDGGAISIGHPYGMSGARMTGHVLIEGGRRGAKYAVVTMCIGGGMGAAGLFEIH"
     gene            3487..>4681
                     /gene="pimC"
                     /locus_tag="VNY79_06415"
     CDS             3487..>4681
                     /gene="pimC"
                     /locus_tag="VNY79_06415"
                     /EC_number="1.3.1.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018515 - pimeloyl-CoA dehydrogenase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pimeloyl-CoA dehydrogenase large subunit"
                     /protein_id="HWX72113.1"
                     /translation="MDLRFTAEENAFRAEVRAFIEGALSASIREKMIEGRGLSKQEMI
                     DWQRILNAKGWAVPHWPKEWGGTEWGPVKTYLFREEIQQTPAPEPLPFGVNMLGPVLI
                     AFGSEKQKKHFLPRIANLDDWWCQGFSEPGAGSDLASLKTSAKRANGHYVVNGQKIWT
                     TSAQHADWIFCLVRTDPAAKKQEGISFLLMDMKTPGITVRPIQTIDGGHEVNEVFFDD
                     VKVPAENLVGEENKGWNYAKFLLGNERTGIARIGASKARIRRLKELAALEQSGGKPLI
                     ADERFRAKIAAVEVELKALEMTELRVVADRNRHGNKPNPASSVLKIKGSEIQQTITEL
                     LLEVVGPYALPDQVPHDQSERWNEPPIGPDWAGPLAPQYFNYRKTSIYGGSNEIQKNI
                     IAKAIL"
BASE COUNT          881 a         1565 c         1498 g          737 t
ORIGIN      
        1 gtcttgatgc tcgccaccgc tccggccacc gacgccgatg actggggcgg cattcttgcc
       61 ggagcgttcg gcgccatggc gatgggcgcg cagagcgcca cggtccgcct gctcatgcgc
      121 ggcattccgc agaccaacgt gatgactggg aacatgaccc aactcggcat tgcgacgacc
      181 gagctgctgc tcgcgtggcg ccgccgcgcg cgcgaccgcg acgacctgag cagcgagaga
      241 gaattcctcg ccgtgcgctc gcggctgttg gtcgttctcg ccatcgccac cggcttcctg
      301 ctcggcgccg ccgctggcgc cgtcggctat gcgaaagccg ggcttgccgg ccttccgctc
      361 gccgtggtga ttgtcggcgc ccttgcggtc tgggtgcttg ttcgggaacg gcgggcgtga
      421 atatcctgcg acgggccggg ccgcttcgcg ggcggcccgt gagccgcaag cagcgctgaa
      481 ctaaagaata tcgacaagaa agaaggggag acccccatgc cggagcgtcc tgaagacatc
      541 atcgcgggca agaagcgtcc gttcaacggc gccgaatttc tggaatcgct gcgcgacggc
      601 cgcgaagtct acatctacgg cgagcgcgtc aaggacgtga ccacgcaccc ggcgttccgc
      661 aattcggcgg cgtcggtggc gctcctctac gaggccctgc acgacaaggc gcaaaaggac
      721 gtgctcacgt cactgaccga caccggctcc ggcggctata cgcacaaatt cttcagggcg
      781 gcgcgttcgc gcgaggaggt gatcgcgcaa cgcgacgcga tcgccgcctg ggcgcgcatc
      841 acctacggct ggctcggccg cagtcccgac tacaaggccg cgttcctcaa cacgctcggc
      901 gccaacgccg agttttatgg caagttcgcc gacaatgcgc ggacctggta caagcgcggc
      961 caggaagcgg tgctctttct caatcacgcg ctggtcaatc cgccgatcga ccgcaacaag
     1021 gcggtcgaac aggtcaagga cgtctacatc acggtccaga aggagaccga cgccggcatc
     1081 tacgtttccg gcgccaaggt cgtggccacc aactcggcgc tcacccatta caatttcctc
     1141 gggcagaaca tgggccagga gatcaccgac ccgagcatgg tggtgatgtt catcgcgccg
     1201 atgaacacgc ccggcatcaa gctgatctgc cggccgtcct acgagttcgc cgctgccgcc
     1261 accggctcgc cgtgggacta tccgctgagc tcgcgcttcg acgagaacga cgcgatcttc
     1321 gtcttcgaca acgccttcat cccgtgggag aacgtcatca ttcaccgcga tatcgagcgg
     1381 ctgaagaatt tctatccgca gtccggcttc ttcaacggct ttaccctgca gggctgcacg
     1441 cggctttcgg tcaagctcga tttcatcgtc ggtctcctct acaaggcggc gcgcgcgacc
     1501 ggggtcgagg cgttccgcgg cgttcaggcg cagatcggcg aggttatcgg ctggcgcaac
     1561 ctgttctggt cgctgaccga cgccatggcg tacaacccgg taccttgggt cgacggcgcg
     1621 gtattgccca acccgcgcgc ctcgagcgcg taccgcctgt tcatgaccga agcctatccg
     1681 gcggtgcgct cgatcgtgga aaaggtgatc gcctccggcc tcatctatct tccttcgcat
     1741 gcgcgcgact tcaagaatcc ggagatcgac aaatatctag ccaagtacgt gcgcggctcg
     1801 aacaacatcg actacaaaga acgcatcaag accatgaagc ttctctggga tgcggtcggc
     1861 accgagttcg gcgcccgcca cgagctctac gagatgaact attccggcag ccacgagctg
     1921 atccgcctct tcccgctgca gcaggcgcaa ggctccggcg tgctgcgcga gatggaagcg
     1981 ctcgccgagc agtgcatggc cgactacgac gaggacggct ggcgccatcc ggcgtatcgg
     2041 gatccggggg acgtgtcggt ggtggggaag aaataaggcc gcgcgggcct cgtcctgccc
     2101 gggagcggtg cgacagagac ggtcgagcgc ggcgatccgg attgctgtgc ctcgctcgca
     2161 acgatgcccg ccgggcttga cccggcaatc cctcacgctg caagaaagaa agaagaaggc
     2221 ccgagctggc ctcgccggtc tgcaaccggc gcgcatggga ggttctaaat gcccgaagcc
     2281 gttattgttt ccaccgcccg caccccgatc ggcagggctt atcgcggcgc cttcaacatg
     2341 acccatggcg ccgaacttgg cggccacgtc gtccgctacg cggtggagcg cgcgggcgtc
     2401 gacccgggcg aggtcgagga cgtcattctc ggctgcgcgc ttcccgagcg cgcgaccgga
     2461 ggcaatatcg cgcgccaggc ggcgctgcgc gccggcctgc cggtcacggt cggcggcatg
     2521 accgtgaacc gcttctgcag ttccggcctg cagacgatcg cgctcgccgc gcagcgcatc
     2581 atctctggcg aagcttcggt catcgccgcc ggcgggctcg agagcatcag cctggtgcag
     2641 gacggcaaga ccccgccggc gccgagcgaa tggatgctgg agcacaagcc cgacctctat
     2701 atgccgatga tcgataccgc cgacaacgtt gccgagcgtt acaaggtgag ccgcgaagcg
     2761 caggatgcct acgcgctcga aagccagcgc cgcaccgcga cggcgcagca ggccaagcgt
     2821 ttcgacagcg agatcgtgcc gctaccgacc accaagaagc tcgtggacaa ggacaccaag
     2881 gccgagagct tcgagccggt gacgctcaag agcgacgagg gcaaccgccc cgacactacg
     2941 ctcgaagggc tcgccgcgct caagccggtg cgcgagggcc gctacatcac cgccggcaac
     3001 gcgagccagc tttccgacgg cgcttcagcc tgcgtgctca tggaggcgaa gctcgccgag
     3061 cggcgcgggc tcaagccgct gggcacgttc cgcggcttcg ccgtcgccgg ctgcgagccc
     3121 gacgagatgg gcatcgggcc ggtgttcgcc gtgcccaagc tgctcggacg ccaaggcctc
     3181 aaggtcggcg acatcgacct gtgggagctc aacgaagcgt tcgcgagcca ggtgctctat
     3241 tgccgcgacc gcctcggcat ttcgcaggag cggctcaacg tcgatggcgg tgccatctcg
     3301 atcggccacc cctacggcat gagcggcgcc cgcatgaccg gccacgtgct gatcgaaggc
     3361 ggccgccgtg gcgccaaata cgccgtcgtc accatgtgca tcggcggcgg catgggcgcc
     3421 gccgggctgt tcgagataca ctaaacttga cacacaagac ttaggacaca cgcagagggg
     3481 cgcgtcatgg accttcgctt cacggcggaa gagaacgcct ttcgcgccga ggtgcgcgcc
     3541 ttcatcgagg gagcgctctc agcatcgatt cgcgagaaga tgatcgaagg gcgcggcctg
     3601 tcgaagcagg aaatgatcga ctggcagcgc atcctcaacg ccaagggctg ggcggtgccg
     3661 cactggccca aggaatgggg cggtaccgaa tggggaccgg ttaagaccta tctgttccgc
     3721 gaggaaatcc agcagacgcc ggcgcccgag ccactgccgt tcggcgtcaa catgctcggg
     3781 ccggtgctca tcgccttcgg cagcgagaag cagaagaagc acttcctgcc gcgcatcgcc
     3841 aatctcgacg actggtggtg ccaaggcttc tccgagcctg gcgccggctc cgatctggcg
     3901 tcgctcaaaa cctcggcgaa gcgcgccaac ggccattacg tcgtcaacgg ccagaagatc
     3961 tggacgacga gcgcgcagca cgccgactgg atcttctgcc tggtgcgcac cgatccggcc
     4021 gcgaagaagc aggaaggcat ttcctttttg ctcatggaca tgaagacgcc cggcattacc
     4081 gtgcggccga tccagaccat cgacggcggc catgaagtca acgaggtgtt cttcgacgac
     4141 gtgaaggtgc cggccgagaa tttggtcggc gaggagaaca agggctggaa ctacgccaag
     4201 ttcctgctcg gcaacgagcg caccggcatc gcccgcatcg gcgcttccaa ggcgcgcatc
     4261 cgccgcctca aggagctcgc cgcgctcgag caatccggcg gcaagccgct gatcgccgac
     4321 gaacgcttcc gcgccaagat cgccgccgtc gaggtcgagc tcaaagcgct ggaaatgacg
     4381 gaattgcggg tggtcgccga ccgcaaccgc cacggcaaca agccgaaccc ggcgtcttcc
     4441 gtgctcaaga tcaagggctc ggagattcag cagaccatca ctgagctgct gctcgaagtg
     4501 gtcggcccgt acgcgctgcc cgatcaggtt ccgcacgacc agagcgaacg ctggaacgag
     4561 ccgccgatcg gccccgattg ggccggcccg ctggcaccgc aatatttcaa ctaccgcaag
     4621 acctcgatct acggcggctc caacgagatc cagaagaaca tcatcgccaa ggccattctc
     4681 g
//
LOCUS       DATMQB010000211         2874 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3487718, whole genome shotgun sequence.
ACCESSION   DATMQB010000211 DATMQB010000000
VERSION     DATMQB010000211.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2874)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2874)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2874
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3487718"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2841)
                     /locus_tag="VNY79_06420"
     CDS             complement(<1..2841)
                     /locus_tag="VNY79_06420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012253115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-[ACP]--phospholipid O-acyltransferase"
                     /protein_id="HWX72114.1"
                     /translation="MSTSLMTTRRFAPLFWCQFFAAFGDNFLKTSLVFVILFQVAGAD
                     SEALITLAGATLIAPFFFLSGLGGELADRYDKALVAQRLKLAEIAVAAIAVAGFAFHS
                     LTLLFFAVFLFGTIASLFGPIKYGILPDHLARSELTTGNALVEGGTFLAILLGTIVAG
                     IAAKGGGDPIHFAWLMMVTALASWGASLLIPSTGEGAPQLTVNRNIAASTIGLVKYVW
                     AEPRLWWGAMVVSWFWLVGAIVLSLLPPLVTFRIGGSEGVVTLFLTIFSVAVAVGSGL
                     AAWLAAGRIVLLPTLCGAVLLGLFSLDLGRTASAIVGAAHPIGIGEYFSSPYSIHLAI
                     DLAGVAIAGGLFIVPTFAAVQAWAGADHRARVIAAVNVLNAAFMVVGALLIALLQKLG
                     WSVPTLFALIGLANLVVAVVIGFTMPTSWMNDLLSIVFRAFFRLEVTGLENVAKAGDN
                     AIIALNHVSFLDPPLAMALLPKRPVFAIDVAMSKQWWIQPFLKFVRTMALDPLKPMAL
                     RTIINAVRDGNMLVIFPEGRITITGSLMKIYDGAAMIADKSDAMVVPVRIDGPEVTIF
                     SRLKNTQVRRRLFPKITVTLLEPVKLSVDPEFKGRKRRLAAGAALYDVMSNLMYRTTP
                     TDRTVVEAIIKAAAIHGGKWRIIEDPLSGSLNYKRLLQATAILGAKLMPLALEGRAVG
                     VMLPTSNGAVVTLLALMSGGRVPAMLNFTSGAANILGACRAAEIDTVVTARAFVEKAR
                     LEKLIAQIEQHVHIVYLEDVRKTVSFGDKLRGALRAKKPLVARKPDDWAVILFTSGTE
                     GVPKGVVLSHRNVLTNVAQAEARIDFGREDKLFMALPAFHSFGFTGGIVLPLISGVPT
                     YFYPSPLHYRTVPELVYGICATYLFGTDTFLAGYARMANPYDFRSLRYIVAGAEPIKE
                     STRRTYLEKFGLRILEGYGVTEAAPTLAVNTPM"
BASE COUNT          563 a          899 c          993 g          419 t
ORIGIN      
        1 catcggcgta ttgacggcga gcgtcggcgc ggcctcggtc acgccgtagc cttcgaggat
       61 gcgcaggccg aatttttcca gataggtgcg gcgggtcgat tccttgatcg gctcggcgcc
      121 ggcgacgatg tagcgcagcg agcggaagtc gtacgggttc gccatgcggg catagccggc
      181 gaggaacgtg tcagtgccga agaggtaggt cgcacagatg ccgtagacca gttccggcac
      241 ggtgcggtaa tgcagcggcg agggatagaa gtaggtgggc acgccggaaa tcagcggcag
      301 cacgatgccg ccggtgaagc cgaaggaatg gaacgcgggc agcgccatga acagcttgtc
      361 ctcgcgcccg aaatcgatcc gcgcctcagc ctgcgccacg ttcgtgagca cgttgcggtg
      421 cgagagaaca acgcccttgg gcacgccttc ggtgccggag gtgaacagga tcaccgccca
      481 gtcatcgggc ttgcgcgcga ccagcggctt tttcgcccgc agcgccccgc gcagcttgtc
      541 gccaaagctc accgtcttgc gcacatcttc caggtagacg atgtgcacgt gctgctcgat
      601 ctgggcgatg agtttctcca gccgcgcctt ctcgacgaag gcgcgcgcgg tgacgacggt
      661 gtcgatctcc gcggcacggc aggcgccgag gatgttggcg gctcccgagg tgaagttgag
      721 catcgccgga acgcggccgc cggacatcag cgccagcagc gtaaccacgg cgccgttcga
      781 ggtcggcagc atgacgccca ccgcgcggcc ctcgagcgca agcggcatca gcttggcgcc
      841 gaggatcgcg gttgcctgca acagccgctt gtagttcagg ctgccgctga gcggatcctc
      901 gatgatgcgc catttgccgc cgtggatcgc cgccgccttg atgatcgctt cgacgacggt
      961 gcggtcggtc ggcgtggtgc gatacatgag gttcgacatc acgtcgtaga gcgcggcgcc
     1021 cgcggccaga cgacgcttgc gtcccttgaa ctccggatcg acggaaagct tcaccggttc
     1081 gagcagcgtc accgtgatct tcggaaacag gcggcggcgc acctgcgtat tcttgagccg
     1141 gctgaagatc gtcacctccg gtccgtcaat gcgcaccggc accaccatgg cgtccgactt
     1201 gtcggcgatc atcgcggcgc cgtcgtagat cttcatcagg ctgccggtga tggtgatacg
     1261 gccttccggg aaaatcacca acatgttgcc gtcgcgcacg gcgttgatga tggtgcgcag
     1321 cgccatcggc ttgagcggat cgagcgccat cgtgcgcacg aacttaagga acggctggat
     1381 ccaccattgc ttcgacatcg cgacgtcgat ggcgaagacc ggccgcttgg gaaggagcgc
     1441 catcgcaagc ggcggatcga ggaagctcac atggttgagg gcgatgatgg cattgtcgcc
     1501 cgccttggcg acgttctcca gccccgtgac ctcgaggcgg aagaaggcgc ggaagacgat
     1561 ggagagaaga tcgttcatcc agctcgtcgg catggtgaag ccgatgacga cggcgacgac
     1621 gagattggcg aggccaatga gcgcgaacag cgtcggcacg ctccagccga gcttctgcag
     1681 gagcgcgatc agcagcgcgc cgacgaccat gaaggcggcg ttgagcacgt tgacggcggc
     1741 gatgacgcgg gcgcggtggt cggcgccggc ccaggcctgc accgcggcga aggtcggcac
     1801 gatgaacagc ccgccggcga tggcgacgcc ggcgagatcg atggcgaggt gaatgctgta
     1861 gggcgaggaa aaatactcgc cgatcccaat cggatgcgcg gcgcccacga tcgccgatgc
     1921 cgtccggccg agatcaaggg aaaacaggcc gagcagcacg gcgccgcaca acgtcggcag
     1981 cagcacgatg cgcccggcgg cgagccaggc ggcaagtccg gagccgaccg ccaccgcgac
     2041 cgagaagatg gtgaggaaca gggtgacgac accctcgctg ccgccgatcc ggaaagtcac
     2101 gagcggcggc agcagcgaca gcacgatggc gccgacgagc cagaaccagc tcaccaccat
     2161 cgcgccccac cacagccgcg gctccgccca cacatacttg acgagaccga tcgtcgaggc
     2221 ggcgatgttg cgattgaccg taagctgcgg cgcaccctcc ccggtgctcg ggatcagcag
     2281 gctcgcgccc cacgacgcca gcgccgtcac catcatcagc caggcgaagt ggatcggatc
     2341 gccgccgccc ttggcggcga tcccggcgac gatggtaccg agcaggatgg caaggaaggt
     2401 gccgccctcg accagcgcgt tgccggtcgt cagctccgag cgcgcgagat ggtcggggag
     2461 gatgccgtat ttgatcgggc cgaacagcga ggcgatggtc ccgaacagga acacggcgaa
     2521 gaacagaaga gtcaacgaat ggaaagcgaa gccggcgaca gcgatcgcgg cgacggcgat
     2581 ctcggcgagc ttgagccgct gcgccaccag ggccttgtcg tagcggtcgg cgagctcgcc
     2641 accgagcccg gagaggaaaa agaacggcgc aatcagggtc gcgccggcca gcgtgatcaa
     2701 ggcttcggaa tcggctcccg ccacctggaa caggatgacg aagaccagcg aggtcttgag
     2761 gaagttgtcg ccgaatgccg cgaagaattg gcaccagaac aagggcgcga aacgtcgcgt
     2821 ggtcatcagg gacgtggaca tggctctccc cgcttgcttc ccaggcaact acgt
//
LOCUS       DATMQB010000212         2288 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2245663, whole genome shotgun sequence.
ACCESSION   DATMQB010000212 DATMQB010000000
VERSION     DATMQB010000212.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2288)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2288)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2288
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2245663"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..225
                     /locus_tag="VNY79_06425"
     CDS             <1..225
                     /locus_tag="VNY79_06425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2497 domain-containing protein"
                     /protein_id="HWX72115.1"
                     /translation="ERAQLLSRETSAAVDSAFNSLAQTVLVQNARTLEDLVREMLRPM
                     LKTWLDDNLPGMVERLVRAEIERVSRGRVG"
     gene            complement(307..735)
                     /locus_tag="VNY79_06430"
     CDS             complement(307..735)
                     /locus_tag="VNY79_06430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HWX72116.1"
                     /translation="MPSYDPNNIFAKILRGELPAHKVYEDDKAFAFLDIMPRAPGHTL
                     VIPKAEARTFLDIKADDLAYLMGATQKIARAAMTVFAADGLTIQQFNEPAGGQVVFHL
                     HIHVIPRKNGVALKPPASVKEDPAVLSDQALKLAAALKSG"
     gene            complement(762..2090)
                     /locus_tag="VNY79_06435"
     CDS             complement(762..2090)
                     /locus_tag="VNY79_06435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HWX72117.1"
                     /translation="MSHLQNEPPPSREREPFAAGNLTITAIAAISEIDAAAWDACANP
                     PMAYDARHTSDPAPAEAPHGSCHAAGAAVHLADQDLAFNPFLSYHFLSALETSKSVGG
                     RTGWQPQHLLVQAAEGTLLAAAPCYLKSHSRGEYVFDAGWAEAFARAGGSYYPKLQVA
                     VPFTPAPGRRLLVRPGQHAEEARRALAAALLELCRIDDASGVHVTFATEPEFRFLGEL
                     GFLQRNDQQFHWENAGYATFEDFLAVLAARKRKTIRRERQDALANGVSVHWLTGSDLT
                     EAIWDAFFAFYMETGSRKWGRPYLTRQFFSLVGETMRERILLVMAKRSGRWIAGAINF
                     IGSHSLFGRHWGATEHHPFLHFELCYYQAIDYAIAHKLPRVEAGAQGEHKIARGYMPT
                     TTYSAHYIANPALRRAVADYLVRERAYVAAVGTELAATGPYRKNLAAEPD"
     gene            complement(2087..>2288)
                     /locus_tag="VNY79_06440"
     CDS             complement(2087..>2288)
                     /locus_tag="VNY79_06440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HWX72118.1"
                     /translation="MGSLLPSLTARPLFVAYAVGDLPALAPLAARHILCLPLLTWVVR
                     TAPERQRAARYADQMIFEGFRP"
BASE COUNT          401 a          717 c          785 g          385 t
ORIGIN      
        1 gagcgcgcgc agctcctctc acgcgagacc agtgccgcag tcgactccgc tttcaactcg
       61 ctggcgcaga ccgtgctggt gcagaacgcc cgcacgctgg aggacctggt gcgcgagatg
      121 ctgcggccga tgctgaaaac ctggctcgat gacaatctcc cgggcatggt cgagcgcctg
      181 gtgcgcgccg agatcgagcg ggtttcgcgc ggacgcgtag ggtgaaggcg gctcgcgtcc
      241 acctggacac tctttgacag aggttgaccg aggctcggct gcggccggcc tcctccccgc
      301 cgcggatcac ccgctcttga gcgccgccgc aagcttcagc gcctgatcgg agaggaccgc
      361 cgggtcctcc ttcacgctcg ccggaggctt caacgccacg ccgttcttgc gcgggatgac
      421 gtggatgtgg aggtgaaaga cgacctggcc gcccgccggc tcgttgaact gctgaatggt
      481 gaggccgtcg gcggcaaaga ccgtcatcgc cgctcgcgcg atcttctgcg ttgcgcccat
      541 gagataagcg agatcatcgg ccttgatgtc gagaaaggtg cgggcctcgg ctttggggat
      601 caccaaagtg tggcccggcg ctcgcggcat gatgtcgaga aacgcgaacg ccttgtcgtc
      661 ctcatagacc ttatgggccg gcaattcgcc gcgcaggatc ttggcgaaaa tgttgtttgg
      721 atcgtagctc ggcatcgtgc tttcccccgg agcgatcgac atcaatcagg ctcggcagcc
      781 aaattcttgc gatagggacc ggtcgcggca agctcggtgc cgacggcggc gacataggcg
      841 cgctcgcgca ccagatagtc ggcgacggcc cgccgcagcg ccgggttggc gatgtaatgc
      901 gccgaatagg tggtggtcgg catatagccg cgcgcaatct tgtgctcgcc ctgggcaccg
      961 gcctcgacgc gcggcagctt gtgcgcaatg gcgtagtcga tcgcctgata atagcagagc
     1021 tcgaaatgca ggaacggatg gtgctcggtg gcgccccagt ggcggccgaa caaggagtgc
     1081 gagccgatga agttgatggc accggcgatc cagcgccccg accgtttggc catcaccagc
     1141 aggatgcgct cgcgcatcgt ttcgccgacg agggaaaaga actggcgcgt gagatatggg
     1201 cggccccatt tgcgcgagcc ggtctccatg tagaaggcaa agaacgcatc ccagattgct
     1261 tccgtcagat cgctgccggt gagccagtgc acgctgacgc cgttcgccag agcgtcctgg
     1321 cgttcgcggc ggatagtttt gcgtttgcgc gcagcgagca cggcgaggaa atcctcgaac
     1381 gtcgcgtacc cggcgttttc ccagtggaac tgttgatcgt tgcgctgaag gaatccgagt
     1441 tcgccgagaa agcggaattc cggctcggtc gcaaaggtga cgtgaacgcc ggatgcatcg
     1501 tcgatccggc agagctcgag aagagcagcg gcgagagccc ggcgggcttc ctcggcatgc
     1561 tggccgggcc gcaccagcag ccgtcgtccc ggcgcaggcg tgaaggggac cgcaacctgc
     1621 agcttcgggt agtagctgcc gccggcgcgg gcaaacgctt ccgcccagcc ggcgtcgaac
     1681 acgtattcac cgcgcgagtg gctcttgagg tagcacggcg cggcggcgag gagcgtcccc
     1741 tccgccgcct gcaccagcag atgctgcggc tgccaccccg ttcggccacc gaccgatttc
     1801 gaggtctcta gtgcggacag aaaatggtat gacaggaacg ggttaaatgc cagatcctga
     1861 tccgcgagat gaactgcggc gccggccgca tggcagctgc catgtggcgc ttccgcaggc
     1921 gctgggtcgc tggtgtggcg cgcgtcgtag gccatcggcg gattggcgca ggcatcccat
     1981 gccgcagcat cgatttcgct gatcgcggcg attgccgtga tggtcagatt cccggccgcg
     2041 aacggttcgc gctcccttga gggcggcggc tcgttctgca gatggctcat ggccggaagc
     2101 cctcgaagat catctggtcg gcgtagcggg ccgcgcgctg tcgctctggc gctgtccgca
     2161 ccacccaggt cagcagcggc aggcacaaaa tgtgccgcgc agcgagcggc gccaacgccg
     2221 gcaggtcgcc gaccgcataa gcgacgaaaa gcggccgggc cgtcaaggac ggcagcagcg
     2281 aacccatg
//
LOCUS       DATMQB010000213         7596 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3175979, whole genome shotgun sequence.
ACCESSION   DATMQB010000213 DATMQB010000000
VERSION     DATMQB010000213.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7596)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7596)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7596
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3175979"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(266..577)
                     /locus_tag="VNY79_06445"
     CDS             complement(266..577)
                     /locus_tag="VNY79_06445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72119.1"
                     /translation="MLVIGCGPGLNAGPVNAVAVANVPAARSGAASGLVNTARMIGAT
                     LGIAVLGAVFAMFAGGVGEGSPIVAGLAPAYVGGGIGEMIGAAATFALIRRDSLHPAT
                     R"
     gene            961..1647
                     /locus_tag="VNY79_06450"
     CDS             961..1647
                     /locus_tag="VNY79_06450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008129119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HWX72120.1"
                     /translation="MTADVRMAEVAALVGDPARANILAALMGGRALTASELVRAAGVS
                     PQTTSGHLGKLADGRLIACVKQGRHRYYRIATHRVAEMLEGIMAVVADAPPRHRPASK
                     VDEAMRTARTCYDHFAGKLGVGLTDALCAHGYVALSEEGGEVSDSGVAFFEKFGVDLA
                     AARGCSRIFCRPCIDWTERRPHLGGSVGAALAQRCFDLDWLKRMRESRALTLTPAGRR
                     GLSETFGVSL"
     gene            1749..4517
                     /locus_tag="VNY79_06455"
     CDS             1749..4517
                     /locus_tag="VNY79_06455"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0004832 - valine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006438 - valyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HWX72121.1"
                     /translation="MTIDKTYQPAAVEGRIYAAWEAAGAFRAGRLERAKAPPYCIVIP
                     PPNVTGSLHMGHALNNTLQDILCRFERMRGKDVLWQPGTDHAGIATQAVVERQLMERQ
                     QPGSREMGREAFIERVWQWKAESGGAIIGQLKRLGASCDWSRERFTMDEGLSRAVMKV
                     FVELYRCGLIYKDKRLVNWDPKLKTAISDLEVQQVEVRGSLWHLKYPLEGTDEFVVVA
                     TTRPETMLGDTAVAIHPQNERLRHLIGETAILPLVGRRIPIVADEYADPEKGTGAVKI
                     TPAHDFNDFEVGRRHDLPLVNVLDVEGRLDLTDNAAFLDGVPVSAALDETLALHGLDR
                     FAARKKIVERLEALGLLDKIEPNTHSVPHGDRSGAAIEPYLTDQWYVDAKTLAQPAID
                     AVRAGRTIFVPEQWQATFFDWMEHIQPWCISRQIWWGHRIPAWYGPDGKIFVAENEDD
                     AVADALAHYTEIEEITAEEGHDIAADPERQAWFANEYLHRDEDVLDTWFSSALWPFST
                     LGWPDETPELRRFYPTSVLVTGFDIIFFWVARMMMMGRHFMKEVPFPTVYIHALVRDE
                     RGQKMSKSKGNVIDPLEVIDEYGADALRFTLAAMAAQGRDIKLSAQRVEGNRNFATKL
                     WNAARFTELNGCARNPDFDPRHAGEVLNRWIIHETAQTGREVTAALEAFKFNEAANAV
                     YRFVWNVFCDWYLEMAKPVLAGPDGAAKNETRAAAAWTLDEILKLLHPFMPFVTEELW
                     NVTGGDELLVLAAWPLHDGLDDSAAEAEIGWVIDLITAIRSVRAEMNIAPATLLPLVL
                     AGAAAETRERARRWSEFVQRLARVADISFADAAPPGSMQLVIRGEVATLPLKGVIDFV
                     AERARLEKEMAKADADIARVEQKLGNADFIKRAPEEVVEGEREKRAEAETRKAKLAEA
                     RKRLEAAV"
     gene            4678..5799
                     /locus_tag="VNY79_06460"
     CDS             4678..5799
                     /locus_tag="VNY79_06460"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HWX72122.1"
                     /translation="MPLLAVPPVIPVLRSEFNLSGTEIGILTGLPIILFAAAALVGSR
                     LVALLGVTRAVITGLALTAVGSGLRAAAPDAIALLAATAVMGAGIAVTQPALAALVGR
                     WLPDHIVLGTGIYTNGLIVGEILPVALFPFLFALFGQSWRATFVFWALPIVAIALLVL
                     ALAPPEKPAAIGAARRWWPNWPAREVLRLGSVFAGASAIYFGSNAFLPGYLSETGRAD
                     LISPALTALNVGQLPASLLLIVFARHLERRAWPFVFAGVLCLACLGAIVATAGAVTVA
                     SAAVLGFAAGAAFALGLTLPPLLSAPDEVARVSAAMFTFSYTSALVVSVLSGTAWDLT
                     GDARFAFLPVALAGLPAILLVPTMRFDRAAIGGEKERSR"
     gene            complement(5953..6276)
                     /locus_tag="VNY79_06465"
     CDS             complement(5953..6276)
                     /locus_tag="VNY79_06465"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72123.1"
                     /translation="MEHGLLQRSHPARRHRARSTFAGRKRISLGMRFRALGVSEGDAL
                     GDQPARTRGYGGGDKIGGAFNAQARVARQHLVAAAGFEEAGKVGQLMDDDFRLRPHNG
                     VAQGC"
     gene            6268..6528
                     /locus_tag="VNY79_06470"
     CDS             6268..6528
                     /locus_tag="VNY79_06470"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72124.1"
                     /translation="MLHLRGIESLVLRYGRLYGPWTWYDAPTGRGPLHVDAAARAAQL
                     AATRGAPGVYNIAEDDGAVSIAKARRELGFDPGFRLPTPPVN"
     gene            complement(6521..>7596)
                     /locus_tag="VNY79_06475"
     CDS             complement(6521..>7596)
                     /locus_tag="VNY79_06475"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HWX72125.1"
                     /translation="FQDREKKIPMHSDAIFRIASMSKPITSVAIMMLVEEGKIQLEDP
                     IWAYLPEMKGLKVGVEKTDAAGGNAELSLEPAQREMTIQDLLRHTSGLTYGVFGKSLV
                     KQKYNDATLFDANQTLGEFISKLSKLPLAHQPGTMWDYSMSTDVLGRVVEVVSAMPFD
                     QFVAERITKPLGMSSTGFYVTGEDIGRIAEPQIDPETQKRPAVIDVTKRPNWLSGGGG
                     MVSTATDYLRFTQMLLNGGVLDGTRILSPKTVAFMTSDHLPPDITYSRETLQLFEPTA
                     MAPTPRDGQGFGLGFAVRTQPGQNPRPGSVGEFYWGGIYGTYFWVDPKEKLIAVMMMQ
                     VSGALRSHYRALIRNLVYQALVN"
BASE COUNT         1251 a         2493 c         2544 g         1308 t
ORIGIN      
        1 ctgaaaagct gcccgagccg cgccgcgcca agaagcgccg gtcctcgccg cggcgcaagc
       61 cgccggggtc cggcggcaac ccgccgccgc gccgcggttc ggtgccgaag gtgccgctcg
      121 tcaaggtgta gctcctggtc cggcgtcgcg acagccgatc gtagtccgga tcggtccccg
      181 cgcatcgccc ttccgatttg tccggggcgg cgatcggatg ggcgggccga ccgttttgcg
      241 gctgagatcg gcgagcccgt cgcccttatc gcgtggccgg atgcagcgag tcgcggcgaa
      301 tgagcgcaaa cgtggccgcg gcgccgatca tttcgccgat gccgccgccg acgtaagcgg
      361 gcgcaagccc ggcgacgatg gggctccctt cgccgacgcc gccggcgaac atcgcaaaca
      421 ccgcgccgag aaccgcgatc ccgagcgtgg cgccgatcat gcgcgcggtg ttgacgagac
      481 cggacgcggc gcccgagcgc gccgcgggga cattggcgac tgcgacggcg ttcaccggac
      541 cggcgttgag gccggggccg cagccgatca cgagcatcgc cgcttcgact aacgagattg
      601 caggcgtcga ccacccattg cagtgcggtc acgccggcgc cgagcctggt gccgatctcc
      661 ttgacggcaa gattgacgac cgacgtgtcg atctgcgcga tcagcacgcc gagcggcatc
      721 gtcagcaaga tcagcgtcga gccgtgcgcg aggcgcaaac gcgctggagc aagtatcatt
      781 gccagccggc ctccgcggtc gccctctacg gcggtcaaat gaggaaacga tcgagagagc
      841 cccaagttct gacactacgg cggtggccga agcgtccacc ggtgacatgc ggtcccggcg
      901 cattacattc aggggtggaa gaagattcag gtgtgaagac ctcgggtgaa ggaagtcacg
      961 atgaccgcgg acgttcgcat ggctgaagtc gcggcgctgg tcggcgatcc ggcgcgcgcc
     1021 aatattctcg cagcgctgat gggcggccgc gcgctcactg cgagcgagct tgtgcgcgcg
     1081 gcaggcgtgt caccgcagac gacgagcggc catctcggca agctcgcgga cggacggttg
     1141 atcgcctgcg tcaagcaggg acgccatcgc tattaccgca tcgcgaccca ccgcgtcgcc
     1201 gagatgctgg agggcatcat ggcggtcgtt gccgatgcgc cgccgcgcca ccggccggct
     1261 tcgaaagtcg acgaggccat gcgcactgcg cgcacctgct acgatcattt tgccggcaaa
     1321 cttggcgtcg ggctgaccga cgcgctttgc gcgcacgggt atgtggcgct gagcgaggag
     1381 ggcggcgaag tcagcgacag tggagtcgca ttcttcgaaa aattcggcgt cgaccttgcg
     1441 gcggcgcgcg gctgcagccg catcttctgc cgcccgtgca tcgattggac cgagcggcgg
     1501 cctcacctcg gcggcagtgt cggcgccgcg ctggcgcagc gctgcttcga cctcgactgg
     1561 ctcaagcgca tgcgggaaag ccgcgcgttg acgctcacgc cggccggccg ccgcggcctg
     1621 agcgaaacgt tcggcgtttc gctgtagagc ggccgccgtt cggttttgcg ccagcctcag
     1681 ccggcaccag cgttgacact gtatgcgccg aggggttctt agcccgcgat gccggcagaa
     1741 gcgcagcaat gaccatcgac aagacctacc agcccgccgc ggtcgagggc cgcatctacg
     1801 ccgcatggga agcggcaggc gccttccgcg ccggccggct cgagcgtgcc aaggcgcctc
     1861 cctattgcat cgtcatcccg ccgcccaatg tgaccggctc gctgcacatg ggccacgcgc
     1921 tcaacaacac cttgcaggac atcctgtgcc gcttcgagcg catgcgcggc aaggacgtgc
     1981 tgtggcagcc cggcaccgac cacgccggca tcgccacgca ggccgtggtc gaacgccagt
     2041 tgatggagcg ccagcagccg ggcagccgcg aaatgggccg cgaggccttc atcgagcgcg
     2101 tgtggcaatg gaaggcggaa tcgggcggcg ccatcatcgg ccagctcaag cggctcggcg
     2161 cctcctgcga ctggtcgcgc gagcgcttca ccatggacga aggcctttcg cgcgcggtga
     2221 tgaaggtgtt cgtcgagctc tatcgctgcg gcctcatcta caaggacaag cgcctcgtca
     2281 attgggaccc caagctcaaa actgcgatct ccgatctcga agtgcagcag gtcgaggtga
     2341 ggggcagcct ctggcacctc aagtatccgc tcgagggcac cgacgaattc gtcgtggtcg
     2401 cgacgacgcg gccggagacg atgctgggcg acaccgccgt cgccatccat ccgcagaacg
     2461 agcgcctacg gcatctgatc ggtgagaccg cgatcctccc gctcgtcggc cgccgcattc
     2521 cgatcgtcgc cgacgagtat gccgatccgg agaagggcac cggcgcggtg aagatcacgc
     2581 cggcgcacga tttcaacgat ttcgaggtcg ggcgccgtca cgatctgccg ctcgtcaacg
     2641 tgctcgacgt cgaagggcga ctcgatctca cggacaacgc cgcatttctt gatggcgtac
     2701 cggtgtcggc tgcgctcgac gagacgctgg cgctgcacgg cctcgaccgt tttgccgcgc
     2761 gcaagaagat cgtcgagcgg ctagaggcgc tgggactgct ggataagatc gagccaaaca
     2821 cccacagcgt gccgcacggc gaccgctccg gcgcggcgat cgagccctat cttaccgatc
     2881 aatggtacgt cgacgccaag acgctggcgc agccggcgat cgacgcggtg cgcgccgggc
     2941 gcaccatctt cgtcccggag caatggcagg cgacgttctt cgactggatg gagcacattc
     3001 agccctggtg tatctcgcgc cagatctggt gggggcatcg tattcccgcg tggtacgggc
     3061 cggacggaaa aatcttcgtc gccgagaacg aagacgatgc ggtcgccgac gcgctggcgc
     3121 actacaccga aatcgaggag atcacggccg aggaggggca cgacatcgcc gccgatcctg
     3181 agcggcaggc atggtttgcc aacgagtatc tgcaccgcga cgaggacgtg ctggacacct
     3241 ggttctcgtc ggcgctgtgg ccgttctcga cgttgggctg gcccgacgaa accccggaac
     3301 tgaggcggtt ttacccgacc agcgtgctcg tcaccggctt cgacatcatc ttcttctggg
     3361 tcgcgcgcat gatgatgatg gggcggcact ttatgaagga ggtgccgttc ccgaccgtgt
     3421 acatccacgc gctcgtgcgc gacgagcgcg ggcagaagat gtcgaagtcg aaaggcaacg
     3481 tcatcgaccc cctcgaggtc atcgacgaat acggcgcgga cgcgttgcgc ttcaccttgg
     3541 cggcaatggc ggcgcagggc cgcgacataa agctctccgc gcagagggtc gagggcaacc
     3601 gcaatttcgc gaccaagctc tggaatgccg cgcgtttcac ggagctgaac ggctgtgcgc
     3661 gtaatcccga tttcgatccg cgccacgccg gagaagtgct caaccgctgg atcattcacg
     3721 aaacggcgca gactggacgc gaggtcaccg cagcgctcga agcgttcaag ttcaacgagg
     3781 ccgccaacgc cgtctatcgc tttgtctgga atgtcttctg tgactggtat ctcgaaatgg
     3841 cgaaaccggt gctcgccggc cctgatggcg cggcgaagaa cgagacgcgc gcggccgcgg
     3901 cgtggacgct cgatgagatt ctgaagctgc tgcatccgtt catgccgttc gtcactgaag
     3961 aattgtggaa cgtcaccggc ggtgacgagc ttctcgtgct cgcggcatgg ccgctgcacg
     4021 acggattgga cgattccgcc gccgaggctg agatcgggtg ggtgatcgac ctcatcaccg
     4081 cgatccgctc ggttcgggcg gaaatgaata tcgcccccgc aacgctgctg ccgttggtgc
     4141 tcgccggcgc tgcggccgag acccgcgagc gggcgcgccg gtggtcggaa ttcgtgcagc
     4201 gcctcgcccg cgtcgccgac atctcgttcg ccgatgcggc gccgccaggg tcgatgcagc
     4261 ttgtcatacg cggcgaggtc gcgaccttgc cgctcaaggg tgtcatcgac ttcgtggccg
     4321 agcgcgcccg gctcgaaaag gaaatggcca aagctgacgc cgacatcgcc cgcgtcgagc
     4381 aaaagctcgg caatgccgac ttcatcaagc gcgctcccga ggaggtggtc gaaggcgagc
     4441 gcgagaagcg cgcagaggcc gagacgcgta aggcgaagct cgccgaggcg cgcaagcggc
     4501 tcgaagccgc ggtgtaatgt tcattcgctc cgagccgcag gcggcgccca cttcggacag
     4561 aacaaaggcc gggtgaaccg gcccagaaaa aatctcgaac agagaaattc cttggcgaaa
     4621 tcccgactac ccctgacggc gcttgctctt ctctggcttg tcggtaacgc actgcggatg
     4681 ccgcttctcg cggtcccgcc ggtcattccg gtactgcgca gcgaattcaa tctttcgggg
     4741 accgagatcg gcatactgac cggcctgccg atcatcctgt tcgcggcggc cgcattggtc
     4801 ggctcgcggc tggtcgctct actcggtgtc acacgcgccg tcatcacggg gttggcgttg
     4861 accgcggtgg ggagcgggct gcgggccgca gcgcccgacg cgatcgccct cctcgccgcg
     4921 acggcggtca tgggtgcggg cattgcggtg acgcagcctg cgctggcggc gctcgtcggc
     4981 cgctggttgc ccgaccacat cgtcctgggc accggcatct acaccaacgg attgatcgtt
     5041 ggcgaaatcc tgccggtcgc gcttttccca ttccttttcg cgctcttcgg tcagagctgg
     5101 cgcgcgacat tcgtcttctg ggcgctgcca atcgtcgcca tcgcgctcct ggtgctggca
     5161 ctggcgccac ccgaaaaacc cgccgccatc ggtgccgcgc gacgatggtg gcccaactgg
     5221 ccggcgcgcg aggtcctgcg tctcggctct gtgttcgccg gggcgagcgc gatctatttc
     5281 ggcagcaacg ctttccttcc cggctatctg agcgagaccg gccgcgccga tctcatcagt
     5341 ccggcgctca ccgcgctcaa tgtcggccag cttcccgctt cgctgctgct gatcgtcttt
     5401 gcgcgccatc ttgagcgcag ggcgtggccg ttcgtgttcg cgggcgtgct gtgcctggcg
     5461 tgcctggggg ccatcgtcgc cacggccggc gcggtgaccg tggcgagcgc cgccgttctg
     5521 ggctttgccg ccggcgccgc cttcgccttg ggtcttactc tgccgccgct cttgagcgcg
     5581 ccggacgagg tcgcgcgcgt gtcggcggcg atgttcacct tcagctatac gagcgcgctg
     5641 gtcgtctcgg tgctgagcgg caccgcctgg gatcttaccg gcgacgcacg cttcgccttc
     5701 ctgccggtcg cgctggccgg gctgcccgcg atcctgctcg tgccgacgat gagattcgac
     5761 cgtgcggcaa tcggcggcga aaaggagcga tcgcggtgaa cgtttttctc gccggcgcca
     5821 ccggcgcggt cggacggcga ttgtcgcttc ttctgcgcgc cgatgggcat gccgtgaccg
     5881 gcacgacgcg ctcgcgcgcg aaggaggcgc aactgcgatc agacggcgtg acgcccgtcg
     5941 tcgtgaatgt gttcaacagc cctgcgcgac gccgttgtgc gggcgaagcc tgaaatcgtc
     6001 atccatcagc tgaccgacct tgccggcctc ctcgaacccg gccgccgcga cgaggtgctg
     6061 acgcgcaacg cgcgcctgcg cattaaaggc accgccaatc ttgtcgccgc cgccatagcc
     6121 gcgggtgcgc gccggttgat cgcccaaagc atcgccttcg cttacgccga gggcccggaa
     6181 cctcatgccg agactgatcc gcttgcgtcc ggcgaaagtg gagcgggcgc ggtgacggcg
     6241 cgcggggtgc gagcgctgga gcaggccgtg ctccatttgc ggggaatcga aagcctcgtg
     6301 ttgcgctatg ggcggctcta cggcccgtgg acgtggtacg acgcaccgac cggccgcggc
     6361 cctctgcacg tcgatgccgc cgcgcgcgcg gcacagctcg cggccacgcg cggcgcgccc
     6421 ggtgtctaca acatcgccga ggacgatggc gcagtgtcga tcgcgaaggc gcgccgagag
     6481 ctcggcttcg atccagggtt ccggctcccg acgccgcctg tcaattgacg agcgcctgat
     6541 agacgagatt gcggatgagc gcgcggtagt gcgagcgcag tgcgccgctg acctgcatca
     6601 tcatgaccgc gatcagcttc tccttcgggt cgacccagaa ataggtgccg tagatgccgc
     6661 cccaatagaa ttcgccgacc gaacctggac gcgggttctg gccgggttgg gtgcgcaccg
     6721 cgaaaccaag tccgaagcct tgtccgtctc gcggggtggg cgccatggcc gtcggctcga
     6781 aaagctgcag cgtctcgcgg ctgtaggtga tgtcgggcgg cagatgatcc gacgtcatga
     6841 acgcgacggt tttcggtgac aagatacgcg tgccgtccag cactccgccg ttcagcagca
     6901 tctgcgtgaa tctcaggtag tcggtggctg tcgagaccat gccgccacca ccggacagcc
     6961 aattggggcg cttggtgaca tcgatcactg ccggccgctt ctgcgtctcc ggatcgatct
     7021 gtggttcggc gatgcgccct atgtcctctc ctgtaacgta gaaaccggta ctggacatgc
     7081 cgagcggctt cgtgatgcgc tcggcgacga actggtcgaa gggcatcgcg gacacgacct
     7141 ccacgactcg tcccagcacg tcggtcgaca tgctgtaatc ccacatggtc ccgggctggt
     7201 gagcgagagg aagcttcgac agtttggata tgaattcgcc cagcgtctga ttggcatcaa
     7261 agagggtcgc gtcgttatat ttctgcttga ccagcgattt gccgaagacg ccgtaggtca
     7321 gtccggacgt gtgccgcagc aggtcttgaa tcgtcatttc gcgctgcgcg ggctccagcg
     7381 atagttcggc gtttccgccg gcggcgtcgg tcttctcgac gcccaccttg aggcccttca
     7441 tttcgggaag ataagcccag atcgggtcct cgagctggat cttgccttcc tcgaccagca
     7501 tcataatggc gacggaggtg atgggcttgc tcatcgaggc gatccggaag atcgcgtcgc
     7561 tgtgcatcgg gatctttttc tcgcgatcct gaaagc
//
LOCUS       DATMQB010000214         3957 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1622019, whole genome shotgun sequence.
ACCESSION   DATMQB010000214 DATMQB010000000
VERSION     DATMQB010000214.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3957)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3957)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3957
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1622019"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..274)
                     /locus_tag="VNY79_06480"
     CDS             complement(2..274)
                     /locus_tag="VNY79_06480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BolA family protein"
                     /protein_id="HWX72126.1"
                     /translation="MRTQDLITEKLRKAFAPEDLRVEDESHRHEGHAGHRPGGETHFR
                     VYIVAQAFRGKNRLERHRMINVALASELAGGVHALAIHATAPGETT"
     gene            380..1012
                     /locus_tag="VNY79_06485"
     CDS             380..1012
                     /locus_tag="VNY79_06485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HWX72127.1"
                     /translation="MMTTDSPLFDRIRVKPDQDRRLRAELPACQWPRCSAPATHRAPK
                     GRLRASEYWRFCLEHVREYNNSYNFFAGMSEDAIAKYQKEAVTGHRPTWKIGSVGGTT
                     RRDSRRSADFRASGWAAEDPSALFGDGAARWSGQARRAPEGRTILNAQRRALGVLGLE
                     ADAKRADIKARFKVLVKRHHPDANGGDRTSEERLREIIQAYNYLKSAGYC"
     gene            1144..2130
                     /gene="cobS"
                     /locus_tag="VNY79_06490"
     CDS             1144..2130
                     /gene="cobS"
                     /locus_tag="VNY79_06490"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051116 - cobaltochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobS"
                     /protein_id="HWX72128.1"
                     /translation="MTLATEPQSGLPDMKVSIRQLFGFDSDLEVPAYSEPDEHVPDID
                     TDYRFDRATTLAILAGFAKNRRVIVTGYHGTGKSTHIEQVAARLNWPCVRVNLDSHIS
                     RVDLIGKDAIVIREGMQVTEFRDGILPWALQNNVALCFDEYDAGRPDVMFVIQRVLES
                     SGRLTLLDQNKVIKPHPAFRLFATANTVGLGDTSGLYHGTQQINQGQMDRWSIVTTLN
                     YLPHDNEVEIVLAKAKHYRTAEGRDIVSKMVRVADLTRNAFMNGDISTVMSPRTVITW
                     AENADIFNDVGFAFRLTFVNKCDELERPLVAEFYQRCFGQELPESTVNVALS"
     gene            2168..>3957
                     /gene="cobT"
                     /locus_tag="VNY79_06495"
     CDS             2168..>3957
                     /gene="cobT"
                     /locus_tag="VNY79_06495"
                     /EC_number="6.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051116 - cobaltochelatase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobaltochelatase subunit CobT"
                     /protein_id="HWX72129.1"
                     /translation="MASNIKPKNPAKEAPTEPFKRAVGVCLRAIAGKGDVEVAFAAER
                     PGLAGGKARLPEPPRRLNEREAAIVRGHADSIALRLACHDPAVHRKLVPGGPQARAVF
                     EAVEQARVEAIGSRRMGGVARNLAAMLDDRFHRGKYDEITDRADAPIEDALAMIVRER
                     LTGELPPPTARKIVELWRPLIEDRAGRNLDRLERVLNDQRRFGDVVHDLLDNLDMGED
                     RSSDSDDEEGEDGDEQNRSDEAGQDGDASDSADSERMSLEEAETSTDESPESASEAID
                     APSAEMADDAEMGDSETAAEPWRPRHLRNEPLGPDYRPFVAKFDEIVGAEDLCEPEEL
                     ERLRGYLDKQLSHLQGVVARLANRLQRLLLAQQNRAWEFDLEEGLLDAARLSRVIVDP
                     LHPLSFKREKDTHFRDTVVTLLLDNSGSMRGRPITVAATCADILARTLERCGVKVEIL
                     GFTTRAWKGGQSREAWLAQGKPPNPGRLNDLRHIVYKSADAPWRRSRKNLGLMMREGL
                     LKENIDGEALDWAHKRLLARTETRKILMMISDGAPVDDSTLSVNPGNYLERHLRWVIE
                     DIETRSPVELIAVGIGHDVTRYYRRAVTIV"
BASE COUNT          706 a         1336 c         1291 g          624 t
ORIGIN      
        1 gtcacgtcgt ctcgcccggc gccgtcgcat ggatggcgag cgcatgcacc ccgccggcaa
       61 gctcgctcgc cagcgccacg ttgatcatgc ggtggcgttc gagccggttc ttcccgcgaa
      121 aggcctgggc cacgatatac acgcggaagt gcgtctcgcc gcccggccga tggccagcgt
      181 gaccttcgtg ccggtgggat tcgtcttcaa cgcgcaggtc ctcgggcgcg aaagccttgc
      241 gcaacttttc agtgatgaga tcctgggttc gcatcgagca gccttagcca gaccgaagca
      301 gcgcggtcaa cgacggcgac gcgctgtttt gccgcctgtc aagtcttgaa cgttcgcaca
      361 ccgcgcccgc ataataccaa tgatgactac agactcgccg ctttttgatc gcatccgggt
      421 caagcccgac caggaccggc ggctgcgcgc cgagctcccg gcgtgtcagt ggccgagatg
      481 cagcgcgccg gccacccatc gcgcgcccaa gggccgtctg cgcgcgagcg agtattggcg
      541 gttctgtctc gaacacgtcc gcgaatacaa caactcatac aatttcttcg ccggcatgag
      601 cgaggacgcg atcgcgaaat atcagaaaga ggcggtcacg ggtcaccgtc ccacctggaa
      661 aataggctcg gtcggtggaa cgacgcggcg cgattcgcgg cgttcggcgg attttcgcgc
      721 ctccggctgg gcggccgagg acccttccgc cctgttcggc gacggcgcgg cccgctggtc
      781 cggccaggcc cggcgcgcgc ccgagggccg caccatcctc aatgcgcaac gccgcgcgct
      841 cggcgtgctc ggccttgaag ccgacgccaa acgtgccgat atcaaggcga ggttcaaggt
      901 attggtaaag cggcatcatc ccgacgccaa cggcggcgac cgcacctccg aggaacggct
      961 gcgcgagatc atccaagcct acaactacct gaaatcggca ggctattgct gatctttgcg
     1021 agtagctttc gccgacttgt gcgtttctgc taactttgcc gcgccggccg acccgtcggc
     1081 ccgtcccgac aagcttggga gagatgggtc gcgccgcgga ctttccgggg ccacggagga
     1141 gcaatgacgc tcgcaacaga accgcaatcc ggcttgccgg acatgaaggt gtcgatccgc
     1201 cagctcttcg gcttcgacag cgacctggaa gttcccgcct attcggaacc cgacgagcac
     1261 gtccccgaca tcgataccga ctaccggttc gaccgggcga cgacgcttgc cattcttgcc
     1321 ggctttgcca agaaccgccg ggtcatcgtc accggttacc acggcaccgg caagtcgacg
     1381 cacatcgagc aggtggcggc gcgcctcaac tggccgtgcg tgcgggtcaa tctcgacagc
     1441 cacatcagcc gcgtcgatct catcggcaag gatgcgatcg tgatccggga aggcatgcag
     1501 gtgaccgagt tccgcgacgg catcctgccg tgggcgctgc aaaacaacgt cgcgctctgc
     1561 ttcgacgagt acgacgctgg ccgcccggat gtgatgttcg tgatccagcg ggtgctcgaa
     1621 tcgtcgggcc gcctgacgct gctcgaccag aacaaggtga tcaagccgca cccggcgttc
     1681 cgcctgttcg cgaccgccaa caccgtcggc ctcggcgata cttccggcct ctatcacggt
     1741 acgcagcaga tcaaccaagg ccagatggac cgctggtcga tcgtcacgac cttgaactac
     1801 ctgccgcacg acaacgaagt cgagatcgtg ctcgccaagg cgaaacatta ccgtaccgcc
     1861 gagggccgcg acattgtcag caagatggtg cgcgtagcgg acctcacccg caacgcgttc
     1921 atgaacggcg acatctcgac ggtgatgagc ccgcgcacgg tgatcacctg ggcggagaac
     1981 gccgacatct tcaacgatgt cggcttcgcc ttccggctga ccttcgtcaa caagtgcgat
     2041 gaactcgagc gccccctggt ggccgaattc tatcagcgct gcttcgggca ggaattgccg
     2101 gaatcaacgg tcaacgtggc gctcagctga ggagcgttgc ggtcggcttg cagcatccgc
     2161 gcggcacatg gcctcgaaca tcaagcccaa gaatcctgcc aaggaagcgc cgacggagcc
     2221 gttcaagcgc gccgtcggcg tctgcctgcg ggcgatcgcg ggcaagggcg acgtcgaggt
     2281 cgcgttcgcc gccgagcgcc cgggcctcgc gggcggcaag gcgcggctgc cggagccgcc
     2341 gcgccgtctc aacgagcgcg aggccgcgat cgtgcgcggc cacgccgact cgatcgcgct
     2401 gcggctcgcc tgtcacgatc cggcggtgca tcgcaagctc gtgcccggcg gcccgcaggc
     2461 gcgcgcggtg ttcgaggcgg tcgagcaggc ccgcgtcgag gcgatcggct cccgccgcat
     2521 gggcggagtc gcgcggaacc tcgccgcgat gctcgacgac cgcttccatc gcggcaagta
     2581 cgatgagatc accgatcgcg ccgacgcgcc gatcgaggac gcgcttgcca tgatcgtccg
     2641 cgaacggctg accggcgaat tgccgccgcc gaccgcgcgc aagatcgtgg agctgtggcg
     2701 tccgctgatc gaagatcgcg ccggccgcaa tctcgaccgg ctcgagcgcg tgctcaacga
     2761 ccagcgccgc ttcggcgacg tcgtgcacga tctgctcgat aatctcgaca tgggcgagga
     2821 tcgaagcagc gattccgacg acgaggaagg cgaagacggc gatgagcaga accgctcgga
     2881 tgaggccggt caggatggcg atgcctctga ttcagccgac agcgagcgca tgagcctcga
     2941 agaggccgag acctcgaccg atgaatcgcc ggagagcgcg tcggaggcga tcgacgcgcc
     3001 gtccgccgag atggccgacg acgcggagat gggtgattcg gaaaccgccg ccgagccgtg
     3061 gcggccgcgc cacctgcgca acgagccgct cggtcctgac tatcggccgt tcgttgccaa
     3121 gttcgacgag atcgtcggcg ccgaggatct ctgcgagccg gaagagctcg agcgcctgcg
     3181 cggctatctc gacaagcagc tgtcgcacct ccagggcgtg gtcgcacggc ttgccaaccg
     3241 cctgcagcgc ctgttgctgg cgcaacagaa ccgcgcctgg gagttcgatc tggaagaggg
     3301 cctgttggac gcggcgcggc tgtcgcgcgt catcgtggac ccgctgcatc cgctctcgtt
     3361 caagcgcgag aaggacacgc acttccgcga cacggtggtg acgctgctcc tcgacaattc
     3421 cggctcgatg cgcggtcggc caatcacggt ggcggcgacc tgcgccgaca ttctcgcccg
     3481 caccctggaa cgctgcggcg tgaaggtcga gattctcggc ttcaccacgc gagcgtggaa
     3541 gggcgggcag tcgcgcgagg cctggctggc gcagggcaag ccgcccaatc ccggccgcct
     3601 caacgatctg cgccacatcg tctacaagtc ggcggacgct ccctggcgcc ggtcgcgcaa
     3661 gaacctcggg ctgatgatgc gcgagggcct gctcaaggaa aatatcgacg gcgaggcgct
     3721 ggactgggcg cacaagcgcc tgctggcgcg cacggagacc cgcaagatcc tgatgatgat
     3781 ctccgacggc gcgccggtcg acgattcgac gctatcggtc aacccgggca actacctcga
     3841 gcgccacctg cgctgggtga tcgaggacat cgagacccgc tctcccgtcg agttgatcgc
     3901 cgtcggcatc ggccacgacg tcacgcgcta ctaccggcgg gcggtgacca tcgtcga
//
LOCUS       DATMQB010000215         5278 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3176223, whole genome shotgun sequence.
ACCESSION   DATMQB010000215 DATMQB010000000
VERSION     DATMQB010000215.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5278
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3176223"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            24..1178
                     /locus_tag="VNY79_06500"
     CDS             24..1178
                     /locus_tag="VNY79_06500"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX72130.1"
                     /translation="MRPSIMIAAALAAGLSAPASAEDAYVVGITAALTGPPASTYAPA
                     VEALRLYLERVNAAGGVNGKKVRLAIEDDSAQPSKAAANAKKLLAEDNPVLLLNASLS
                     STYAPVIAEAKTAGVPLMFASSVCPKDVYPPAQEGEFCTTAFAATYDSRAALAFVKEK
                     AKEPVKIGFSAMAIPLSRGEMDFAESQAPALGMVAVDKEVIPPPTADYTPFATKLKDA
                     DANWVFSWAPWVTQVRTFEALRRLGWSGDYITWAHIEAEDELKRIKDAKLYVIGANAL
                     FEDALPIHNEIAEAVKQAGGKYPADQMTEGWIAGMVVEAALKGAGPAATPAKVQASME
                     NLKVDLKGLRGGPIEWTKDNHFRTRQYYRVYRWDGSKVALVKDWFSYDVK"
     gene            1323..2195
                     /locus_tag="VNY79_06505"
     CDS             1323..2195
                     /locus_tag="VNY79_06505"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX72131.1"
                     /translation="MQLIVNIVVLAAIYALIACGYVLIYRVSRVLNLAHGELMMLGAY
                     LLLTTASAFSGNAFVAIAVAIVLSLLVGVLIYVFLMRKMAGEMLLAAVLTTVALGILL
                     QGLMILIWSAQQQYPGQSLALANPALVLPGGGRISLFAALIVVAAALSYGGLFLFLQF
                     GRWGVRMRAAGQNPLLAAQRGINLHAVYALAWGLSTLTGSLAGMLIALDSGLTSSMAV
                     IGLKAFPAALVGGLDSLLGALFGALIVGAAEVLSIQYIDPLLSDVVPFLVLIAALVVR
                     PWGLLGTREELDRV"
     gene            2188..3270
                     /locus_tag="VNY79_06510"
     CDS             2188..3270
                     /locus_tag="VNY79_06510"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX72132.1"
                     /translation="MFRNAPRASGYFRTGYAQDLALIQTRLEGAALAALALVLALFPF
                     FAGAFYLDLACQAFLAAIGALSLMLLTGYAGQISLGHAGLLAAGAFTVGILVREVRAP
                     FWLTLPAAVLVGAVLGVIFGLPSLRLRGLYLAVSTLALYFVVAYLGGEYESRRGFSTG
                     IMIDAPSIGGFALKNARGWYFVLLAAAAATSLICANLLRSRTGRAWRAIRAHETVAEA
                     LGIGIASYKLLAFVISSALASLAGALFAYYRGFVSVEAFSLFLSIQYVAMIIIGGMGS
                     LLGALLGALFVTLLPYLIEALLMRLPHAQSYAGSLFAIDYSAFGVVMILFLVFEPLGL
                     VGIWRRLQNYFLLWPFKYRPVAGTRR"
     gene            3267..4070
                     /locus_tag="VNY79_06515"
     CDS             3267..4070
                     /locus_tag="VNY79_06515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX72133.1"
                     /translation="MNEAPLLRVDKLEVVYHRTITAVQGISLAAEAGQIVAVLGTNGA
                     GKSTTLRAISGFLGIDDARVTDGSVTFKARRIENRPPNEIARLGVVLVPERDKVFPNL
                     TVAENLAAPFAPSARGRSASEEFVYGAFPRLADLRRRTAGLLSGGERQMLALGSALVC
                     RPELLLVDELSLGLAPAIVEELMARLVQIRRDLGLTIVLVEQNAAAALAVADYGYVLE
                     NGRCVLDGDSARLRAHGDIQEFYLGQSQGGARASYRAVKQYRRSRRWYG"
     gene            4063..4842
                     /locus_tag="VNY79_06520"
     CDS             4063..4842
                     /locus_tag="VNY79_06520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX72134.1"
                     /translation="MAELAVEDLRLRFGGLVALDGITLAVERSELLALIGPNGAGKTS
                     VLNCVSGIYRGNGAIRFRGRDIAGLAPHEVARLGVARTFQHGELFPQMSVLDNLLAGR
                     HARIRTNPLAEMLFLPGVRRQEVEHRAAVEAIVEFVELERYRHAPVASLPFGTQKLVG
                     FARALALEPAVLLLDEPSAGLNREEREDLARFILRIKHQLGIAMIWIEHDMQMVADLA
                     DRIHVLDYGRTLAEGPPEAVLKHPAVIDAYLGRAGTVAASA"
     gene            5132..>5278
                     /locus_tag="VNY79_06525"
     CDS             5132..>5278
                     /locus_tag="VNY79_06525"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HWX72135.1"
                     /translation="MLRVENLDVFYGDLQALDGVSLEVEEGAIVAIVGANGAGKTTLI
                     RALAG"
BASE COUNT          777 a         1782 c         1726 g          993 t
ORIGIN      
        1 gacgaaacga cggaggaaag tccatgcgtc catcgatcat gatcgccgcg gcgcttgccg
       61 ctggcctgtc cgcgccggca tcggccgagg acgcgtatgt cgtcggcatc accgccgcgc
      121 tgaccggccc gccggcttca acctacgcgc cggcggtcga ggcgctgcgg ctctatctcg
      181 agcgggtgaa cgcggcgggc ggcgtcaacg gcaagaaggt caggctcgcc atcgaggacg
      241 attcggcgca gccgtcgaag gccgccgcca acgccaagaa attgctggcc gaggacaatc
      301 cggtgctgtt gctcaacgcc agcctctcct ccacctacgc cccggtcatc gccgaagcca
      361 agaccgccgg cgtgccgctg atgttcgcaa gctcggtatg cccgaaggac gtctatccgc
      421 cggcgcagga aggcgagttc tgcacgaccg cttttgccgc gacctacgac agccgcgctg
      481 cgctcgcgtt cgtgaaggag aaggcgaaag aaccggtcaa gatcggcttt tccgcgatgg
      541 ccattccgct ctcgcgcggc gaaatggact ttgccgaaag ccaggctccg gcgctcggca
      601 tggtcgcggt cgacaaggag gtcattccgc caccgaccgc cgactacacg ccgttcgcga
      661 ccaagctcaa ggatgcggac gcgaactggg tattctcctg ggcaccgtgg gtgacccagg
      721 tgcgcacctt cgaagctttg cggcgcctcg gctggtcggg cgactacatt acctgggccc
      781 atatcgaggc cgaggacgag ctcaagcgca tcaaggacgc gaagctctac gtcatcggcg
      841 ccaacgcgct gttcgaagac gcgctgccga tccacaatga gatcgccgaa gcggtgaagc
      901 aggcgggcgg caaatatccc gccgaccaga tgaccgaagg ctggattgcc ggcatggtag
      961 tggaagcggc gctcaagggc gccggccccg cggcaacacc cgccaaggtc caggcgtcga
     1021 tggaaaacct caaggtcgat ctcaaaggcc tgcgcggcgg tccgatcgag tggaccaagg
     1081 acaaccactt ccgtacccgg caatattatc gcgtctaccg ttgggacggt tcgaaggtcg
     1141 ccctggtcaa ggactggttc tcctacgacg tgaaatagcg agcggtctgt ggtcaacgca
     1201 gccacagttt tttagtttgc agcccggatg caacaaagtg aaatccgggg acggtgcctg
     1261 cgcctgaaag ccgctcccgg atttcgctgg cgcttcatcc gggctaccaa ggaacccgct
     1321 gcgtgcagct catcgtcaac atcgtcgtgc tggccgccat ctacgcgctg atcgcctgcg
     1381 gttatgtgct catctatcgc gtcagccgcg tacttaatct ggcgcatggc gaattgatga
     1441 tgctcggcgc ctatctgctg ctgacgacgg cgtccgcctt ttccggcaat gcgtttgtcg
     1501 ccatcgccgt ggccatcgtg ctcagcctgc ttgtcggcgt gctcatctac gtgttcctga
     1561 tgcgcaagat ggccggcgag atgttgctcg ccgccgtgct cacgactgtg gcgctcggca
     1621 tcctgctgca gggcctgatg atcctcatct ggtcggcgca gcagcaatat cccgggcagt
     1681 cgctggcgct tgccaatccg gcgctggtgc tgccgggagg cggccgcatc tcgctgttcg
     1741 ccgcgttgat cgtcgttgct gcggcgctca gctatggcgg gctgtttttg ttcctgcagt
     1801 tcgggcgctg gggcgtgcgc atgcgcgcgg ccgggcagaa tccgctgctc gccgcccagc
     1861 gcggcataaa cctgcacgcg gtctacgccc tcgcctgggg actgtcgacg ctgaccggat
     1921 cgcttgccgg catgctgatc gcgctcgatt ccgggctgac cagttcgatg gccgtgatcg
     1981 gcctcaaggc ctttccggcc gcgcttgtcg gcggcctcga cagcctgctc ggcgcgctgt
     2041 ttggcgcctt gatcgtcggc gccgccgagg tgctgtcgat ccagtacatt gatccgctgc
     2101 tgtctgacgt cgtccctttc ctggtgctga tcgccgcgct cgtggtgcgg ccgtggggat
     2161 tgctcggcac ccgcgaggag ctcgaccgtg tttaggaacg cgccgcgggc gagcggctat
     2221 ttccgcaccg gctatgcgca ggacctcgcg ctcatccaga cgcggctcga aggcgcggcg
     2281 ctggcggcgc tggcgctcgt actcgcgcta tttcctttct tcgccggggc cttttatctc
     2341 gatctcgcct gtcaggcgtt cctcgccgcc atcggcgcgc tgtcgctgat gctgctgacc
     2401 ggctatgctg ggcagatttc gctcggccac gccggtctcc tcgccgccgg cgcgttcacc
     2461 gtcggcattc tggtccgcga agtgcgggcg ccgttctggc tcacgctgcc ggcggcggtg
     2521 ctggtcggcg ctgttctggg cgttatcttc ggcctgccgt cgctgcgcct gcgtggactc
     2581 tatctcgcag tgtcgacgct cgcgctctat ttcgtcgtcg cctatctcgg cggcgagtac
     2641 gagagcaggc gcggcttctc caccggcatc atgatcgacg cgccgagcat cggcggcttc
     2701 gcgctcaaga atgcccgcgg ctggtatttc gtgctgctcg ccgccgccgc ggccacgtcg
     2761 ttgatctgcg ccaacctcct gcgcagccgc accgggcggg cttggcgcgc gatccgcgcc
     2821 cacgagaccg tcgccgaagc gctcggcatc ggcatcgcga gctacaagct cctcgccttc
     2881 gtcatctcct ccgccctcgc gtcgctcgcg ggagcactgt tcgcctacta tcgcggcttc
     2941 gtttcggtcg aggcgttttc cctgttcctg tcgatccagt acgtcgccat gatcatcatc
     3001 ggcggcatgg gatcgctgct cggcgcgctg cttggcgcct tgttcgtgac gctgctgcca
     3061 tacctgatcg aggcgttgct catgcgattg ccgcacgcgc agagctacgc cgggtcgctg
     3121 ttcgcgatcg actattccgc cttcggcgtg gtcatgatcc tgtttctcgt tttcgagccg
     3181 ctcgggctgg tcggcatctg gcgccggctg caaaactact ttttgctgtg gccgttcaag
     3241 tatcggccgg tcgcgggcac gcgccgatga acgaggcccc cctgctgcgc gtcgacaagc
     3301 tcgaggtcgt ctatcaccgc acgatcaccg cggtgcaggg gatcagtctc gccgccgagg
     3361 cgggacagat cgtcgctgtc ctcggcacca acggcgccgg caagtccacg accctgcggg
     3421 cgatttccgg cttcctcggc atcgacgacg cccgcgttac cgacggcagc gtgaccttca
     3481 aggcacggcg gatcgagaac cggccgccca acgagatcgc gcgcctgggc gtcgttctgg
     3541 tgcccgagcg cgacaaggtg tttccgaacc tcaccgtggc cgagaatctg gccgcgccgt
     3601 tcgcgccgtc ggcgcgtgga cgaagcgcca gcgaggagtt cgtctatggt gcatttccgc
     3661 gcctcgccga tctgcgccgc cggaccgccg gtctcctttc cggcggcgag cggcagatgc
     3721 tggcgcttgg gagtgcgctc gtctgccgcc cggagctgct cctggtcgat gaattatcgc
     3781 ttggcctcgc ccccgccatc gtcgaagaac tgatggcgcg attggtccag atccgccgcg
     3841 atctcggatt gaccatcgtg ctggtcgagc agaatgccgc cgcggcgctg gcggtggccg
     3901 attacggcta cgtcctggag aacggccgct gcgttctcga cggcgacagc gcgcgactgc
     3961 gcgcgcacgg cgacattcag gagttctatc tcggccagtc gcaaggcggc gcgcgcgcga
     4021 gctaccgcgc ggtcaagcag tatcggcgca gccggagatg gtatggctga gcttgcggtc
     4081 gaggatttgc ggctccggtt cggcggcctc gtcgcgctcg acggcatcac gctcgcggtc
     4141 gagcgcagcg agcttctggc gctgatcggg ccgaatggcg ccggcaagac gagcgtgctc
     4201 aactgcgtca gcggcatcta tcgcggcaat ggcgcgatcc gctttcgcgg gcgcgacatc
     4261 gccggcctgg cgccgcacga ggtggcgcgg ctcggggtcg cccgcacctt tcagcacggc
     4321 gagctgtttc cgcagatgag cgtgctcgat aatctgctcg ccggccgcca tgcccgcatc
     4381 cgcaccaacc cgcttgcgga aatgctgttc ctgccgggcg tgcgccggca ggaggtcgaa
     4441 catcgcgccg ccgtcgaagc gatcgtcgaa ttcgtcgagc tcgagcgcta ccgccacgcg
     4501 ccggtggcga gcctgccgtt cgggacacaa aaactcgtcg gcttcgcccg ggcgctggcg
     4561 ctcgagccgg cggtgcttct gctcgacgag ccttctgccg gactgaaccg cgaagagcgc
     4621 gaggatttgg cgcgcttcat cctgcgcatc aagcatcagc tcggcatcgc catgatctgg
     4681 atcgagcatg acatgcagat ggtcgccgat ctcgccgacc gcatccatgt gctcgactac
     4741 ggccgcacgc tcgccgaagg gcctcccgag gcggtgctga agcaccccgc cgtgatcgac
     4801 gcctatctcg gccgcgccgg gaccgtcgcc gcgtccgcgt agctcgccgt ccaaacggga
     4861 aggcgcgttt cgctcgtctg acggggcggc accgtgttat ctgatgtcga gccacggcgg
     4921 gcatttgcta gaggaggcaa agcgctaacc gcggcgattc cctccccacg tgtagggggg
     4981 gtagggtggt ggccgggagt cgacgcgaca gcattgacgg cctcggatcg ggtccttctc
     5041 tggtggcgtc gaagcgcgca catttcctcc cgacccccac ccccaacccc ttcccctccc
     5101 cgaaagggga gggatacgat gagagggcgt gatgctacgc gtcgaaaatc tcgacgtctt
     5161 ctacggcgat ctgcaggcgc tcgacggcgt atcgctcgag gtcgaagagg gcgcgatcgt
     5221 cgccatcgtc ggcgccaacg gcgccggcaa gaccacgctc atccgcgcgc tcgccggc
//
LOCUS       DATMQB010000216         4238 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4100091, whole genome shotgun sequence.
ACCESSION   DATMQB010000216 DATMQB010000000
VERSION     DATMQB010000216.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4238)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4238)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4238
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4100091"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..310
                     /locus_tag="VNY79_06530"
     CDS             <1..310
                     /locus_tag="VNY79_06530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019173801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HWX72136.1"
                     /translation="HDDISGVGQTEAAHRLCVNIPPERKAHWLQPAVGHYGVFNGSRF
                     RSEIAPRIADFVLSMGHAARARGGFSGRVVQNPRSLHNGGGAGPRAANVVGFGPSRTP
                     "
     gene            599..1372
                     /locus_tag="VNY79_06535"
     CDS             599..1372
                     /locus_tag="VNY79_06535"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family zinc-dependent metalloprotease"
                     /protein_id="HWX72137.1"
                     /translation="MPLRALLYRRPSEPQAIEIVFDRSIYLVRLRRHRQARRYTLRIQ
                     AATREVILTIPPRGTLKEAREFAQKHGGWIAARLGRLPEAAPFMHGGMVPLRGVPHRI
                     AHRRGVRGTVWSELDASGEPLLCVAGNAPHIDRRISDFLRREAKRELETASRRFAADL
                     GLTVRRVAVRDQSSRWGSCSTTGMLSYSWRLILAPSYVLNYLAAHEVAHLVEMNHSPR
                     FWRLVQRLCPGHERAKAWLDVHGSDLHRYGLPEADGDVN"
     gene            complement(1386..2228)
                     /locus_tag="VNY79_06540"
     CDS             complement(1386..2228)
                     /locus_tag="VNY79_06540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007532545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HWX72138.1"
                     /translation="MSALDAVQPAYAISGFLVGALVGLTGVGGGSLMTPLLILVFGIN
                     PAAAVGTDLLYAAVTKTAGSLVHGFNQTIDWRIVRRLAAGSIPMTIVTMAVLRLLDIN
                     SPAVRDLINAALTFALFATAVTLVFRDRLVARYSARLALLPPQRITGFTIIAGAALGL
                     VVSISSIGAGAIGVTVLFLLYPKLPMARIVGSDIAHAVPLTLVGGIGHWLLGAVDLPV
                     FASLIIGSVPGILLGSYAAVRTPERMLRLVLAGTLVVVATKLSFGLVSPSTDVVAAKT
                     TTKH"
     gene            complement(2769..>4238)
                     /locus_tag="VNY79_06545"
     CDS             complement(2769..>4238)
                     /locus_tag="VNY79_06545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004352 - glutamate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0019551 - glutamate catabolic process to
                     2-oxoglutarate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase domain-containing
                     protein"
                     /protein_id="HWX72139.1"
                     /translation="NDAIRIAGADLRCKVIGEGANLGMTQRGRIEAALRGVRLNTDAI
                     DNSAGVNTSDMEVNIKIALSIPLRDGRLTMDARNALLFSMTDEVAGLVLRNNYLQTLA
                     LSLAERRGMEDFGFLQRLIQTLEARGQLDRAVEQLADDMQLAERRRRQQPFTRPELAV
                     LLAYAKLSLYEDLVESAVPDDRYLGRELARYFPQPIGAHFPDALEHHRLRREIIATQL
                     ANSMINRGGPSLIVRIADQTGGAPAAIASAFAAVRDSYGLTALNTAIDELDNHIPGKA
                     QLALYAALQDLLLDRIVWFLRNVDLARGLADVVTHYRDGVAAVETALDAALPEDAARA
                     RSSRRQELVEAGVPEELAGRIAGLGALAAAPDIVLVSDRTGKPVAAVAATYFAAGSFF
                     RVDRITSAAAAIPTADYFDRLALDRARDAMGDAERRLTAAAMVADGLAGASAVEAWAA
                     PRKGEVERIRQAIHEIANSGLTLSKLSLAASLLGDLVKD"
BASE COUNT          732 a         1375 c         1425 g          706 t
ORIGIN      
        1 gcacgacgat atttccggcg tgggccagac cgaggccgcg catcggctgt gcgtgaacat
       61 tccccccgaa cggaaggcgc actggctgca gccggccgtc ggccattacg gcgtattcaa
      121 cggttcgcgt tttcgctcgg aaatcgcgcc gcgcattgct gacttcgtgc tgtcgatggg
      181 tcacgccgcc cgcgctcgcg gcggcttttc tggacgcgtg gtccagaacc cgcgcagcct
      241 gcacaacggc ggcggcgctg ggcctcgggc ggccaacgtc gtcgggttcg gcccgtcccg
      301 caccccgtag aaatcggccg aatcggcgat tttcgccgtc aaaacgcccc caatctgcgt
      361 cggccggcgc taacgccttg agaaaacccc ctgattccga atcaaccggg cgtcaaatct
      421 gagcgcaccc cgctgaccaa agagtgaata aagattcact cgttcgtcac catgctttgg
      481 cgtatcaagg ccgggcgcta ccccaacatg ttgtgtgcac ggcctgctgc atcaaaggcg
      541 ctacacaaca ctttggttat ggcactatcg gatacgattt gggtctggat attccaccat
      601 gccgctgcgc gcgttgcttt accgtcgtcc gagtgagcct caggcgatcg aaatcgtctt
      661 tgaccgttcg atctatctcg tgcggctgcg ccggcatcgg caggcgcgcc gttacacgct
      721 gcgcattcag gcggcgacgc gggaagtgat tttgactatt ccgccgcgcg gaactctgaa
      781 ggaagcccgc gaattcgcgc agaagcatgg cggctggatc gcggcgcgtc tcgggcggct
      841 gccggaggct gcgccgttca tgcacggcgg catggtgccg ctgcgcggcg tgccacaccg
      901 gatcgcgcat cgacgcggtg tccgcggcac ggtctggagc gaactcgacg ccagcggcga
      961 gccgttgctc tgcgtcgccg gtaacgcgcc gcacatcgat cggcgcatca gcgattttct
     1021 gcggcgcgag gccaagcgcg aactggaaac ggcgagccgg cgctttgccg ccgatctcgg
     1081 cctgaccgta cgccgcgtgg cggtgcgcga tcagtccagc cgctggggct cgtgctcgac
     1141 gaccggtatg ctgtcgtact cctggcggct cattctcgcg cccagttacg tgctcaacta
     1201 tctcgccgcg cacgaggtgg cgcatctcgt cgagatgaat cactccccgc gattctggcg
     1261 cttggtgcaa cgcctctgcc cgggtcacga gcgcgcgaaa gcgtggcttg atgtccacgg
     1321 cagcgatctg catcgctacg gcctgccgga agccgacggc gacgtgaact gacgcaaagc
     1381 cggtgtcagt gtttggtcgt cgtcttcgcc gccaccacgt cggtcgacgg tgagaccagg
     1441 ccgaacgaca gcttcgtcgc caccaccacc agcgtcccgg cgagcaccag gcgaagcatc
     1501 cgttccggcg tgcggacagc ggcatagctg cccagcagga tgcccggcac cgatccgatg
     1561 atcagcgagg caaacaccgg cagatcgacg gcgccaagaa gccagtgccc aatgccgccg
     1621 acgagcgtga gcggaacggc atgggcaata tcggagccga cgatgcgcgc catcggcagt
     1681 ttcggataga gcagaaacag caccgtgacg ccgattgcgc cggcgccgat cgaggagatg
     1741 gaaacgacca ggccgagcgc ggcgccggcg atgatcgtga acccggttat ccgctggggc
     1801 gggagcaggg cgaggcgggc cgaataccgc gccacgagcc ggtcgcgaaa caccaacgtc
     1861 acggcagtcg cgaacagggc gaacgtcagc gcggcattga tgagatcgcg gaccgccgga
     1921 ctgttgatgt cgagcagacg caagaccgcc atcgtcacta tggtcatcgg gatgctgccg
     1981 gcggcgagcc gccgcacgat gcgccaatcg atcgtttggt tgaacccgtg caccaggctc
     2041 ccggccgtct tcgtgaccgc cgcgtacagc aggtccgttc cgaccgcggc tgcaggattg
     2101 atcccgaaca ccaggatgag caggggcgtc atcagcgagc cgccgccaac gccggtcaag
     2161 ccgaccaggg cgccgacaag gaagcccgag atcgcatagg ccggttgcac ggcgtcaagt
     2221 gcgctcatgg tgcaaactca gggccgcggg cgggaggtga cgcgcatgat gattgcgatg
     2281 tcgcaccgtc acctggagca atggagcgga ccacaatgcc gcgcccgccg cgcgcccgtc
     2341 ccgatcgtag cgcaggaacg cggaattgct caaccgctcc ggtcttgatc gcaacttctg
     2401 ttcgttcagc gaagccgtaa gcaagcggaa ttgcagccgt ttgcgatccc ggcggtgcgt
     2461 tgcaccgcat cgacacccac atcggctccc cccggtgcct cgctcgcctg gtcggtgcga
     2521 acgggcgttt tgccgcacct gataacacta acgcgtgatc cgcgttgcat ctttggaacg
     2581 cgggtttatt tcccgtgcat taggcccacc gggcggcccc ccatcccccg acacccgccg
     2641 cccggcgcaa taagcctaag ttgaggcaac tactctgaac cccaagcgcg tactctgctt
     2701 ggggttcttt tttgtggcgg ggctggggat atgtcgcgat cggggggcgg gcacttcgca
     2761 atcagtgctc aatccttaac cagatctccc aacaagctcg cggcaagcga gagtttcgac
     2821 aaagtaagcc cggaattggc gatttcgtgg atcgcttggc gaatgcgttc gacctcgccc
     2881 ttgcgcgggg cggcccaggc ctcgacggcg ctcgcgccgg ccaagccgtc ggcgaccatg
     2941 gcggcagccg tgagccggcg ctcggcgtct cccattgcgt cgcgggcgcg gtcgagcgcc
     3001 agccggtcga agtaatcggc ggtcgggatg gcggccgccg cgcttgtaat gcggtccacc
     3061 cggaaaaagc tgccggcggc gaagtacgtg gcggcaaccg cagccaccgg ttttccggtc
     3121 cggtcggaga ccagcacgat atcgggggcg gctgcgagcg cgccgagacc ggcgatgcgt
     3181 ccggcaagct cctcgggcac gccggcttcc acaagctcct gccttcgcga tgaccgcgcg
     3241 cgcgccgcat cctccggcag cgccgcgtcg agtgccgttt cgaccgcggc gacgccgtcg
     3301 cgatagtgcg tcaccacgtc ggcgaggccg cgcgcgaggt cgacattgcg caggaaccag
     3361 acaatgcggt cgagcagcag gtcctgcagc gcggcgtaga gcgcaagctg cgccttgccg
     3421 ggaatgtggt tgtcgagttc atcgatggcg gtgttgagcg cggtcaagcc gtagctgtcg
     3481 cgcacggcgg cgaatgcgga ggcgattgca gcgggcgcgc cgccggtctg gtccgcgatg
     3541 cgtacgatga gcgacgggcc gccgcggttg atcatcgagt tggcgagctg ggtggcgatg
     3601 atttcgcgcc gcagccgatg atgttccagc gcatcgggga aatgcgcgcc gataggctgg
     3661 ggaaagtagc gggcgagctc gcggccgaga tagcgatcgt ccggcaccgc cgattcaacg
     3721 agatcttcgt agagcgaaag cttggcgtag gcgagcagga ccgcaagctc cggccgggtg
     3781 aacggctgct ggcggcggcg acgctcggca agctgcatgt cgtcggcgag ctgttcgacg
     3841 gcgcggtcga gctgcccgcg cgcttccagc gtctggatca ggcgctggag aaagccgaaa
     3901 tcctccatgc cgcgacgctc cgcaagcgag agcgcgagcg tctgcaggta gttgttgcgc
     3961 agcaccaggc cggcgacctc gtcggtcatg gaaaacagga gcgcgttgcg cgcatccatc
     4021 gtcaggcgtc cgtcgcgcaa cgggatgctc agcgcgatct tgatattgac ctccatgtcg
     4081 gaagtgttga cgccggccga attgtcgatg gcgtcggtgt tgagcctgac gccgcgcaac
     4141 gccgcctcga tgcggccgcg ctgggtcatg ccgaggttgg cgccttcccc gatcaccttg
     4201 cagcgcaggt cggcgccggc gatgcgaatg gcgtcatt
//
LOCUS       DATMQB010000217         6686 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1006075, whole genome shotgun sequence.
ACCESSION   DATMQB010000217 DATMQB010000000
VERSION     DATMQB010000217.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6686
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1006075"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="VNY79_06550"
     CDS             complement(<1..346)
                     /locus_tag="VNY79_06550"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HWX72140.1"
                     /translation="MSALATCIAFSALAQGLSQASKPEEVGLSSERLKRVTAAFQADV
                     DKGAIAGAVVLIARDGKLAYSEAVGFQDREKKIPMHSDAIFRIASMSKPITSVAIMML
                     VEEGKIQLEDPIW"
     gene            complement(473..1039)
                     /locus_tag="VNY79_06555"
     CDS             complement(473..1039)
                     /locus_tag="VNY79_06555"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003905 - alkylbase DNA N-glycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HWX72141.1"
                     /translation="MPRTLGRSFFGRSVHEVAPELVGATLLFAGIGGRVVEVEAYHQT
                     DPAAHSFRGQTARNAVMFGPPGLAYVYRSYGIHWCLNFVCEPKGSASAVLIRALEPTA
                     GVAVMRRRRGLAEERLLCSGPGRLCDALGITGAQNGLALDQPPFAILARTEPAAVIAG
                     PRIGITKAVERPWRYGLKGSRFLSKPMR"
     gene            1312..3036
                     /gene="ilvD"
                     /locus_tag="VNY79_06560"
     CDS             1312..3036
                     /gene="ilvD"
                     /locus_tag="VNY79_06560"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004160 - dihydroxy-acid dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0009099 - valine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HWX72142.1"
                     /translation="MDVKTDLKSRLPSRHATEGPERAPHRAFYYAMGLSREQIHQPFV
                     GVATCWNEAAPCNIALMRQAQAVKHGVAAAGGTPREFCTITVTDGIAMGHAGMRASLP
                     SREVIADSIELTVRGHSYDALIGVAGCDKSQPGMMMAMCRLNVPAIFIYGGSILPGTF
                     KGRPVTIQDVYEAVGQHSIGSMSDADLDTLEQNACPSAGACGAQFTANTMATVSEAMG
                     LALPYSAGAPAPYEIRDRFCMLAGEMVMELIAKGIRPRDIVTRKALENAATVVAATGG
                     STNGALHLPAIAHECGIKFDLFDVAEVFKRTPYIADLKPSGRYVAKDMFEAGGIPLLM
                     RTLLDNGFLHGDCITVTGRTIAENLTSVKWNEDQDVVRRADKPMSPTGGVVGLKGNLA
                     PDGAIVKVAGMESLRFSGPARCFDGEEACFDAVKNKKYREGDVLVIRYEGPKGGPGMR
                     EMLATTAALYGQGMGTKVALITDGRFSGATRGFCVGHIGPEAAVGGPIGLLRDGDIIE
                     IDGDKGTLDVKLTKSELDKRTSEWKPRAEEHTSGYLWKYAQQVGSARYGAVTHPGGAV
                     EKACYADI"
     gene            3065..3880
                     /locus_tag="VNY79_06565"
     CDS             3065..3880
                     /locus_tag="VNY79_06565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HWX72143.1"
                     /translation="MLVALAGGLGLGVGTWPGTGIGIAPEAALAFDGTSSPTTAALAP
                     GDSVRSAARVPEGGERAKTLTALQYAADQGHLAAQWKVGRMYADGDGVPQDDMRAFNY
                     FSQIANTHPDESPGTPQARLVANAFVALGRYYLSGIPDSTIKPDAARAREMFAYAASY
                     FGDADAQYRLGRLYLDGTPSDPHQAARWFQLAATKGDCRAEAVLGDLLFQGRSVPRQA
                     ARGLMWLTLSKDCAGPEETWVKPLYDNAFHRASEDERAMALVYLEDWLKGRRE"
     gene            complement(3942..5000)
                     /locus_tag="VNY79_06570"
     CDS             complement(3942..5000)
                     /locus_tag="VNY79_06570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009452048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HWX72144.1"
                     /translation="MGLHWSQLDPAVLTILREGAVIPAHPLALDRDRALDRRRQQALS
                     RYYIDAGAGGLAVGVHATQFAIREVGLYRPVLELAAATAREWTSRPLVLVAGLAGRTN
                     QAVKEARLATSLGYHAGLLSLGAMQGVAESELIEHCAAVAQEMPLVGFYLQPAVGGLV
                     LPASFWRRFAAIDNVVAIKVAPFNRYRTLDVVRGVVEAGAEDRITLYTGNDDHIVLDL
                     AVPFSIPRDGAPVVVRFKGGLLGHWSVWTQKAVALLDEIRAAGVSGQIPTALLTRDSR
                     VTDCNGAFFDVANDFRGCIAGCHEVLRRQGLLEGIWCLDPAEGLSPGQAEEIDRVYRG
                     YPELNDDAFVRENLCRWL"
     gene            complement(5000..5686)
                     /locus_tag="VNY79_06575"
     CDS             complement(5000..5686)
                     /locus_tag="VNY79_06575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HWX72145.1"
                     /translation="MSILERPRVRPSAPAQKKKVPIRRDPARTRERILQAAIGEFSEK
                     GLDGARVDEIARRSRANKRLIYHYFGNKEELFLAVLKHAYDDIRRAEASLNLDGLDPE
                     TAMRRLTEFSFDYSASNPHFIHLVNCENLYGARHLQQSKRILKLNSPVIEMLRRILDR
                     GQREGVFRSDVDPLQLYVSIAALGYFYLSNNPTLSVVFGRDLAGAREVRARREHNVAV
                     VLGFLKQRSG"
     gene            complement(5700..>6686)
                     /locus_tag="VNY79_06580"
     CDS             complement(5700..>6686)
                     /locus_tag="VNY79_06580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007591746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HWX72146.1"
                     /translation="IDDLAAIDGDILVLGVGGKMGPTLAGLAKRAAPGKRVIGVARFS
                     ETDVQHKLEAWGVETLRCDLLDRAAVAKLPRTRNVVFMAGRKFGESGTLDLTWAMNVL
                     VPAHVAEIFPDSRIVALSTGNVYPFVEIRHQGATEAVAPAPPAGEYANSCIGRERMFE
                     YFSRLLGTPGRIIRLNYAIDMRYGVLHDIARKVRDGKPIDLATGHVNVIWQGDANAQI
                     LRALRYCTSPTSPLNVSGPETISVRAVAEAFAGRFNKRPEFTGEEASAGWLANTGEAA
                     RLFGYPVVPLNRMIEWVTDWIARDLPTLNKPTQYESRSGRFAANRPAADARP"
BASE COUNT         1190 a         2162 c         2241 g         1093 t
ORIGIN      
        1 cccagatcgg gtcctcgagc tggatcttgc cttcctcgac cagcatcata atggcgacgg
       61 aggtgatggg cttgctcatc gaggcgatcc ggaagatcgc gtcgctgtgc atcgggatct
      121 ttttctcgcg atcctgaaag ccgacggctt ctgagtaggc gagcttgcca tcgcgagcga
      181 tcagcacgac cgcgccggcg atcgccccct tgtcgacgtc ggcctggaac gctgccgtca
      241 cgcgcttgag ccgttcggac gagaggccca cctcttccgg cttgctcgcc tgcgacagac
      301 cttgcgcaag cgccgagaac gcgatgcacg tcgccagtgc ggacatgcag acgagattgc
      361 gaaatttcat atggcggcct ccctgcgagc gtcgctgcgg ttgatgcatt tcggggaaat
      421 tcttccccag aaccgaggat gaaggtagct taaaggaggc ggctccgctt gcctaccgca
      481 tcggcttgct gagaaaccgc gagcctttga gaccatatcg ccagggtcgc tcgaccgcct
      541 tggtgatgcc gatacgcggc ccggcgatca ccgcggcggg ctcagttcgc gctaggatcg
      601 cgaatggcgg ttggtcgagc gcaagcccgt tctgcgcacc cgtgatgccc agagcatcgc
      661 aaagccggcc gggaccggag cagaggagcc gctcctcggc taggccgcgc cggcggcgca
      721 tcacggcgac gcccgccgtc ggctccaacg cgcggatgag caccgcgctg gccgagccct
      781 tcggctcgca gacgaaattg aggcaccaat gaatgccgta ggaacgatag acgtaggcta
      841 agcccggcgg gccgaacatc acggcgttgc gcgcggtctg accgcgaaag ctatgcgccg
      901 ctgggtcggt ctgatgatag gcctcgacct cgaccacgcg cccgccgata cccgcgaaca
      961 gcaatgtggc tccgaccagt tcgggcgcga cctcgtgcac acttcggcca aagaaggacc
     1021 tgcccagcgt ccgcggcatg aaacattctt gcagcctcgg cggttgaccg taaatcgtgg
     1081 ttaacaacag gtgtcgtttg gccggaatct gtggcttgag cgcaacagcg ctggaacatt
     1141 tgatcgttgt gcaccgcacc actgaatagc gccgcttttt ggccataggg tttttcgaca
     1201 tcgaggcccg caagcgccga caagctattg cgacacttcc ggttttcaga gcggctcggc
     1261 cgcggccggc agggaaaggt aaaagggccg cgtttagccc gcatgagttc gatggacgtc
     1321 aagacagatt tgaaatcgcg gctgcccagc cgtcacgcca ccgagggccc cgaacgggca
     1381 cctcaccgcg cgttctatta cgcgatgggg ctgtcgcggg agcaaattca tcagcccttc
     1441 gtcggcgtag cgacctgctg gaacgaggcc gcgccgtgca atatcgcgct gatgcggcag
     1501 gcgcaggcgg tcaagcatgg cgtcgccgcc gccggcggaa cgccgcgcga attctgcacc
     1561 atcaccgtca ccgacggcat cgctatgggg catgccggta tgagggcctc cctgccgtcg
     1621 cgcgaggtca tcgccgactc gatcgagctc accgtccgcg gccattccta tgatgccctg
     1681 atcggggtcg cgggctgcga caagtcgcag cccgggatga tgatggccat gtgccgcctc
     1741 aacgtgcccg cgatcttcat ctacggcggg tcgatcctgc cgggcacgtt caaaggccgg
     1801 ccggtcacca tccaggatgt ctacgaggcc gtcggccagc actcgatcgg ctccatgtcg
     1861 gacgccgatc tcgacacgct cgagcagaac gcctgcccgt cggccggagc atgcggggcg
     1921 caattcaccg ctaacaccat ggcgaccgtc tctgaggcga tgggcttggc gctgccctat
     1981 tcggcaggcg cgccggcgcc ctacgagatc cgcgacaggt tctgcatgct tgcaggcgaa
     2041 atggtcatgg agcttatcgc caagggcatc cgcccgcgcg acatcgtcac ccgcaaggcg
     2101 ctggagaacg cggcgaccgt ggtcgccgcc accggcgggt cgaccaacgg cgcgctccac
     2161 ctcccggcca tcgcccatga atgcggcatc aagttcgatc ttttcgacgt ggctgaggtc
     2221 ttcaaaagga caccgtatat cgcggatttg aagccgtccg gccgctatgt cgccaaagac
     2281 atgttcgaag ctggcggcat tccgctgctg atgaggacac tgctcgataa cggctttctg
     2341 cacggcgatt gcattaccgt caccggccgc acgatcgcgg aaaacctcac atcggtgaag
     2401 tggaacgaag accaggacgt cgttcggcgg gccgacaagc ccatgtcgcc gaccggcggc
     2461 gtcgtcggtc tgaaaggcaa tctcgcgccc gatggggcaa ttgttaaggt tgccggtatg
     2521 gagagcttgc gtttctccgg accggcgcgc tgcttcgatg gcgaggaggc ctgcttcgac
     2581 gcagtaaaga acaagaagta cagggaaggc gacgtgttgg tcatccgtta cgagggcccc
     2641 aaaggggggc ctggcatgcg tgagatgctg gcgacgacgg ccgccctcta cggacagggc
     2701 atgggcacga aagtcgcact gatcaccgac ggccgcttct caggcgcgac ccgcgggttc
     2761 tgtgtcggcc atatcgggcc ggaggcggcg gtgggcggac cgattggcct gctgcgcgac
     2821 ggcgacatca tcgagatcga tggcgataaa gggacgctcg acgtcaaact gacgaagagc
     2881 gagctcgaca agcgcacgag cgaatggaag ccgcgcgcgg aagaacatac ctcaggctat
     2941 ttgtggaaat acgcccagca ggttgggtca gcgcgctatg gcgccgtgac ccatccgggc
     3001 ggcgcggtcg agaaggcgtg ttatgcggac atctagtaga gtagcccgtc tcgcagccgg
     3061 cggcgtgctg gtcgcgctcg cgggtggact gggcctcggc gtaggaacat ggcccggcac
     3121 cgggatcggc atcgcgcccg aagcggccct ggccttcgac ggaacgagca gcccgactac
     3181 ggccgcgctg gcgcccggcg acagcgtgcg cagtgcggct cgcgtgccgg aaggcggcga
     3241 acgcgccaag acgctgaccg cgctccaata tgcagccgac cagggtcacc tcgcggcaca
     3301 gtggaaggtc ggccgcatgt atgcggacgg cgacggcgtt cctcaggacg acatgcgggc
     3361 gttcaactat ttcagccaga tcgccaatac ccacccggac gagagccccg gcacgcccca
     3421 ggcgcggctt gtcgccaacg cgttcgtggc gctcggccgc tattatcttt ccggcattcc
     3481 cgactcgacg ataaagccgg acgcagcgcg tgcgcgcgaa atgttcgcct atgcggcatc
     3541 ctatttcggc gacgccgacg cccagtaccg gctcggccgg ttgtatctcg acggcacgcc
     3601 gagcgacccg catcaggcgg cacgctggtt ccagcttgcc gcgacgaagg gcgattgccg
     3661 cgccgaggcg gtgctcggcg acttgctgtt ccaggggcga agcgtgccgc gacaggccgc
     3721 ccgcggtctg atgtggctca cgttgagcaa ggattgcgcc ggccccgagg agacctgggt
     3781 caagccgctc tacgacaatg ctttccaccg cgcgagcgag gacgagcggg ccatggcgct
     3841 ggtctatctg gaagactggc tcaaggggcg cagggagtag cagccgcacg gtttcccgcg
     3901 gaacgcgcga cgcccccacg ggccgcgcgc aaacggcgca atcacaacca gcggcacaaa
     3961 ttctcgcgca cgaaggcgtc gtcgttgagt tcgggatagc cccgatagac gcggtcgatc
     4021 tcctccgctt gccccggact gagcccctcg gccggatcga ggcaccaaat gccttccaac
     4081 aggccttgcc ggcgcagcac ctcatgacag ccggcgatgc agccgcggaa atcgttggcg
     4141 acatcgaaaa aggcgccgtt gcagtcggtg acacgcgagt cgcgcgtcag cagcgccgtc
     4201 gggatttgcc ctgacacgcc ggccgcgcgg atttcgtcaa gcaacgcaac cgccttctgc
     4261 gtccaaacgc tccaatggcc gagcagtccg cccttgaacc tgaccacgac cggcgcgccg
     4321 tcgcggggga tggagaaggg gaccgcgagg tcgagcacga tatggtcgtc gttgcctgtg
     4381 tagagggtga tgcgatcctc cgctccggcc tcgacgacgc cgcgcacgac gtcgagcgtc
     4441 cgataacggt tgaacggagc gaccttgatg gcgacgacat tgtcgatcgc ggcgaagcgg
     4501 cgccagaacg aagccggcag cacgaggccg cccaccgccg gctggagata gaagccgacg
     4561 agcggcatct cttgggcaac ggccgcgcaa tgctcgatca actcggattc ggcaacgccc
     4621 tgcatggctc ccaagctgag caatccggcg tggtagccga ggctcgtggc taaccgcgcc
     4681 tccttgaccg cctggttggt gcgtccggcg aggccggcga cgagcacgag cggccgtgac
     4741 gtccattcgc gcgcggtcgc cgcagcgagc tccaggaccg gccgatagag gcccacctcg
     4801 cggatcgcga actgggtggc gtgaacgccg accgcgagcc cgccggcgcc ggcgtcgatg
     4861 tagtagcggc tgagcgcttg ctggcgccgc cggtcgagag cgcggtcgcg atcgagcgcc
     4921 agggggtgcg cgggaatgac cgcgccctcg cgcaggatcg tcagcaccgc ggggtcgagt
     4981 tgcgaccagt gcaagcccat cagccgctcc gctgcttcag gaagccgagg accaccgcga
     5041 cgttgtgctc gcggcgggcg cgaacctcgc gcgcgccggc gagatcgcgg ccgaagacga
     5101 cggagagggt ggggttgttc gacaggtaga agtagcccag cgcggcgatc gagacgtaga
     5161 gctggagcgg gtcgacgtcg ctgcgaaata cgccttcacg ctgcccgcga tcgagaatcc
     5221 gccgcagcat ctcgatgacc ggggaattca atttcagaat gcgcttcgac tgctgcaggt
     5281 gccgcgcgcc gtagaggttc tcgcaattga ccagatgaat gaaatgcgga ttgctcgccg
     5341 aatagtcgaa ggagaattcc gtcagccggc gcatcgcggt ctccgggtca agcccgtcga
     5401 gattgagcga ggcctcggcc cggcggatat cgtcataggc gtgtttgagc accgccagga
     5461 acagctcctc cttgttgccg aaatagtgat agatcagacg tttgttggcg cgcgaacgcc
     5521 gcgcgatctc atcgacgcgc gcgccatcga gccccttttc cgaaaactcg ccgatcgcgg
     5581 cctggaggat gcgctcgcgc gtgcgcgcag gatcgcgccg aataggcact ttcttttttt
     5641 gcgccggagc agacggccgc acgcgcggcc gttcgaggat gctcatcgct gctccagcgt
     5701 cagggccggg cgtccgccgc cggccgattg gcggcgaaac ggcccgaccg gctttcgtac
     5761 tgcgtcggct tgttcaaggt cggcagatcg cgtgcgatcc agtccgtcac ccattcgatc
     5821 atgcgattga gcggcactac cggatagccg aagagcctcg cggcctcgcc ggtgttcgcc
     5881 agccagccgg cggatgcttc ctcgccggtg aattccggcc gcttgttgaa gcgccctgcg
     5941 aacgcctccg ccaccgcgcg cacgctgatg gtctcggggc cgctgacatt gagcggcgac
     6001 gtcggcgacg tgcagtaacg caacgcgcgc aggatctgcg cgttggcgtc gccctgccag
     6061 atgacgttga cgtggccggt ggcaaggtcg atgggcttgc cgtcgcgcac cttgcgggcg
     6121 atgtcgtgca gcaccccgta gcgcatgtcg atcgcgtagt tgagccggat gatccttccc
     6181 ggtgtgccga ggaggcgcga gaaatattcg aacatccgct cgcggccgat gcaggagttg
     6241 gcgtattcgc cggccggggg ggccggcgcg accgcctcgg tcgcgccctg atgccggatt
     6301 tcgacgaacg gatagacgtt gccggtcgag agggcgacga tccgcgagtc cgggaaaatc
     6361 tcggccacat gcgccggcac caggacgttc atcgcccagg tgaggtcgag cgttccgctc
     6421 tcgccgaatt tccgcccggc catgaacacg acgttgcggg tgcgcggcag cttggcgact
     6481 gcggcgcggt cgagcaggtc gcagcgcaag gtctcgacgc cccacgcttc gagcttgtgc
     6541 tgcacatcgg tctcgctgaa gcgggcgacg ccgatcacgc gcttgccggg agccgcccgc
     6601 ttggcgagcc ccgcgagcgt cggccccatc ttgccgccga cgcctaggac gagaatgtcg
     6661 ccatcgatcg cagcgagatc gtcgat
//
LOCUS       DATMQB010000218         2043 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_692177, whole genome shotgun sequence.
ACCESSION   DATMQB010000218 DATMQB010000000
VERSION     DATMQB010000218.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2043)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2043)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2043
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_692177"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            14..511
                     /locus_tag="VNY79_06585"
     CDS             14..511
                     /locus_tag="VNY79_06585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbhB/YbcL family Raf kinase inhibitor-like
                     protein"
                     /protein_id="HWX72147.1"
                     /translation="MAFTVISNSFNDGDYLPKDFILSADFGFGCAGGNKSPHLKWSDA
                     PAGTKSFAITCYDPDAPTGSGFWHWLIVNIPANVSELAEGAGSAGGTLPAGALQTRTD
                     FGGPGYGGPCPPQGDHPHRYLFTVFAVKSDKLDVKTDTSAAVVGFNLHFNTLAKAEIM
                     GLFKR"
     gene            641..817
                     /locus_tag="VNY79_06590"
     CDS             641..817
                     /locus_tag="VNY79_06590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72148.1"
                     /translation="MKIILAFAAFALTAALSHQALACDYHPVNASAQNSTVVACAGDT
                     CKAEQQTSEKQQSE"
     gene            complement(961..>2043)
                     /locus_tag="VNY79_06595"
     CDS             complement(961..>2043)
                     /locus_tag="VNY79_06595"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HWX72149.1"
                     /translation="GDAYRNVSFQPGMPVSDKDYCWTVDDRNKRSLALDLKRPEAQKV
                     IHDLVISADVFITNYPPPVRRRLGIAFDQLSHLNERLIYASLTAYGERGAEANKPGFD
                     STAWWARSGLMDQVRSDARNLPARSVPGMGDHPTALALYGAIVTALLQRERTGKGAHV
                     GTSLMASGVWANACFIQAALDGARFTPRPPRTEAFNALSNHYRCRNDRWLLLAVGVVQ
                     DARLWRLFAETLGRPELADDPRFADRAARLKNAGALVAMLDEIFLQRDGEEWMRLLES
                     KSFVVALVARPSEALHDRQMEENGAIVPLQGGGFTVSSPLWIGGVEKAAATPAPKVGE
                     HSAAILREHGFAEEEIAHLRAQGVVG"
BASE COUNT          362 a          655 c          663 g          363 t
ORIGIN      
        1 aggagaacgg cgcatggctt tcacggtcat cagcaacagt ttcaatgacg gcgattacct
       61 gcccaaggat ttcatcctgt cggccgactt cggctttggc tgcgccggcg gcaacaagtc
      121 gccgcatctc aaatggtcgg acgcgccggc cgggacgaaa agcttcgcca tcacctgcta
      181 cgatccggac gcgccgaccg gctcggggtt ctggcattgg ctcatcgtga acatcccggc
      241 gaatgtgagc gagctggccg aaggggccgg cagtgccggc ggcacgctgc cggccggcgc
      301 gttgcagacc cgaaccgatt tcggcggacc cggttacggc ggcccgtgcc cgccccaagg
      361 cgaccatccg caccgttatc tgttcaccgt ctttgccgtg aagtccgaca agctcgatgt
      421 aaagaccgat acatcggcgg cggtggtcgg attcaatttg catttcaata cgctggccaa
      481 ggcggaaata atggggctgt tcaagcggta gggtggcgga gggaactttt ccgcgtggaa
      541 ctcgccgcat gcgaggcgcc gcctgggtcg gcgcagtcat ggacttccgg tgccgttggg
      601 cgtaccttca gggctccctg gctaagaagg acgcggacca atgaagatca tccttgcgtt
      661 tgccgccttt gctttgaccg ctgctctgtc gcatcaagct ttggcgtgcg actaccaccc
      721 cgtaaatgcg tctgcccaaa actcgaccgt cgttgcctgt gccggcgata cgtgcaaggc
      781 cgagcaacag acgagcgaga agcagcagtc tgaataacgg atttgcagcg cgccacagcg
      841 cccgcgccca ttgcgcgaga atcagtcgtt gcgccggatg atgcggcgcg cgctttgaag
      901 tgctgctttc tcaaacgctg atgagaccgg cgcatctgtg ggccgctgcg cagagcacga
      961 tcagccaaca actccctgag cgcggaggtg ggcgatctcc tcctccgcaa atccgtgctc
     1021 gcgcaggatc gccgcactgt gctcgccgac cttcggggcc ggcgttgccg ccgctttttc
     1081 cacgccgccg atccacagcg ggctgctgac ggtgaagcca ccgccctgta acggtacgat
     1141 cgcgccattc tcctccattt gccggtcgtg aagagcttca ctcgggcgcg ccaccagcgc
     1201 caccacaaag ctcttcgatt cgagaaggcg catccactcc tcgccgtcgc gctgcaggaa
     1261 aatctcgtcg agcatggcaa ccagggcgcc agcattcttg agcctggcgg cgcggtcggc
     1321 gaagcgcgga tcatcggcga gttccggccg cccgagcgtc tcggcgaaca gccgccacag
     1381 ccttgcgtcc tggacgacgc cgaccgcgag caagagccat cggtcattac ggcagcggta
     1441 gtgattggag agcgcattga aagcttcggt gcgcggcggc cggggcgtga accgggcgcc
     1501 gtcgagcgcg gcctggatga agcaggcgtt cgcccagaca ccgctcgcca tgagcgaagt
     1561 gccgacgtgg gcccccttgc cggtccgctc acgttgcagg agcgcagtga cgatcgcgcc
     1621 gtagagggcg agcgccgtcg gatggtcgcc catgccgggg accgagcgcg ccggcagatt
     1681 ccgcgcatcg gaccgcacct gatccatgag gcctgaacgc gcccaccacg cggtggaatc
     1741 gaagcccggt ttgttcgcct cggcaccgcg ctcgccgtaa gcggtcagcg acgcgtagat
     1801 gagccgctcg tttaggtgcg agagctggtc gaacgcgatg ccgagccggc gccggaccgg
     1861 cggcgggtag ttggtgatga acacatcggc gctgatgacg agatcatgga tgaccttttg
     1921 cgcctccgga cgcttgagat ccaatgccag gctgcgtttg tttcgatcat cgaccgtcca
     1981 gcagtagtcc ttgtcgctga ccggcatgcc gggctggaag gacacgttgc ggtaggcatc
     2041 ccc
//
LOCUS       DATMQB010000219        15145 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1007085, whole genome shotgun sequence.
ACCESSION   DATMQB010000219 DATMQB010000000
VERSION     DATMQB010000219.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 15145)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15145)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15145
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1007085"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(176..2329)
                     /locus_tag="VNY79_06600"
     CDS             complement(176..2329)
                     /locus_tag="VNY79_06600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012093348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase subunit
                     alpha"
                     /protein_id="HWX72150.1"
                     /translation="MAERSFAREVEDLKLGEGEEFRGEGILAITKALLQSGVSYVGGY
                     QGAPISHLMDVLADAKDVLDDLGVHFENSASEAAAAAMLAASVHYPIRGAVTFKSPVG
                     INVASDAIANLASGGVTGGALIIIGEDYGEGSSIMQERSHPYAMKSQVWLLDPRPNLP
                     TIVKAVEDGFELSEVSHTPVMLEVRIRACHVHGRFTAKENKRPSFSLREALEKPRRDI
                     ERVVLPPASYLHEREKIEQRWPAAVKFIKERKLNEFFGPEVAEVGIVVQGGFYNSVMR
                     SLQQLGLADVYGETAVPIYVLNVTYPLIDDEVATFAIDKKAILMVEEGQPEFIEQALN
                     TILRRRDIQTKISGKDVLPMAGEYTPALVTKGIKSFLERYAPALLGNAPPTPDASGVL
                     ADPKIQELAKTVPPRPPGFCIGCPERPIFAAMKLVQKELGEHNVAGDIGCHLFASLPP
                     FNIGATTMGYGLGPASSSAFNVKADKRPISIIGDGGFWHNGLSSSVGNAVYNKHDGVI
                     MVVDNFYSAATGGQDIMSSRALNPARSTNNTIVSAVKGIGVKWVRHLDRTYDVGRMRD
                     ILREALTSKESGPKVIVASSECMLNKQRRVKPLFQKSVREGERIVQERFGVDEDVCTG
                     DHACIRLSGCPSLSVKHTDDPLKDDPVAAIDNNCVGCGNCGEVSEAAVLCPSFYRADI
                     IHNPNRFDRLFSGLRRAVIGFLQRRRETGRIVFAD"
     gene            2722..4194
                     /locus_tag="VNY79_06605"
     CDS             2722..4194
                     /locus_tag="VNY79_06605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016558308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX72151.1"
                     /translation="MLAPKHFASAAGNTLNIAYNVNLPSFDPDVGPSSVNPTIQAIYR
                     SIFDQYIGQKPNLAFEPGLLTGWGWSDDKSKVWMDVRENVVWHDGTPFTPDDVIWSIQ
                     REGKPDGGNPVAFIWAGIDNFKVDGHRITADVKNYDPVLFKWMAFLTGYILPKAYYEK
                     VGPQGFEKKPIGTGPYIVDAYEGNAYLRLKANPKYWGGKPAFETVVFKFVPDATSRVA
                     EIESGSSDVTLEVPYEEFDRLKGKAGLKGVVTPISDIAQIFITNGGVMDDKNVRLAMC
                     HAVDKQAIIKRLLRGYGVAIDTLEAPEYAAFDPTIKVSHDPALAAKLLAASGYSKEKP
                     VKFTIQTTRGFKPKDYEMIQAIVGMWRNVGIDANIEIYEIAKHFELRMSHKLAPAAFY
                     NWGNAIGDPTTSTGFAMFSKSPHSAWHSDDLDAKIGPLWGEKDETKRIQGWKDVDRYI
                     AEQGYILPLLQYAQPILYKSDLKVTPNVSGALQPTLVAKS"
     gene            4271..5278
                     /locus_tag="VNY79_06610"
     CDS             4271..5278
                     /locus_tag="VNY79_06610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019863001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX72152.1"
                     /translation="MLLAVVVNRMAMALVTLAGVAVVIFVLLRVVPGDPVAMMISPGA
                     SAADIVALKAHYGLDAPLPTQFWIWISGVVHGDFGTSITLHVYVTDVLASRLPATIEL
                     AIMALLVAVVLGGGVAVAGTLMRRTAGETVIDGLNSIMLAVPDFIWALALVLLFAVAI
                     PVLPLTGRIDPALAEGFATRFYLTESVLTGRFADAGNILSHMAMPALALALPLAAVIV
                     RLLKQSLKEAMVQDYVLLARIKGFRELHLVLQEALRNAVGPTLALSGVQFTFLIGGTV
                     IVERIFSYPGIGNLAIDAVINRDFPLIQGLVLLFGLIFILVNMGVDLAVAALNPRLRH
                     A"
     gene            5365..6192
                     /locus_tag="VNY79_06615"
     CDS             5365..6192
                     /locus_tag="VNY79_06615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016558310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX72153.1"
                     /translation="MLRDPKVVGAGGFIVFLIVLALAAPLVAPMDPLAQNLVLATVPP
                     AGFAESEPGYLLGTDGLGRDVLSRVIFGTQVSLTVAFVAAGLACLIGSLLGLLAGFLG
                     GFVDALISRLVDIWMAFPPVLLSILLVAVLGTGLHSVIAAIVVIDWTRFCRVVRTETM
                     GQAQMDYVVAARTIGFARPAILFREILPNVAPVLIALLTLEMGIAVVVEAILSFVGLS
                     VSSDTPTWGGMIAEGRQIVHEAWWVLAAPLAALFATVVAFNQLGDGLARSLDPVLRR"
     gene            6189..7079
                     /locus_tag="VNY79_06620"
     CDS             6189..7079
                     /locus_tag="VNY79_06620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013527974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX72154.1"
                     /translation="MTPPRLAIEALSAISLRDGDRPILRRVSLSVGVGEVHGVVGESG
                     AGKSTIAKAILGIVPSQVRITGGTINFEGQNLLSMPAKALRAVLGRDIALVPQDPSTA
                     LNPSRRIDAQLTDGLRLKRGLSAREARLRALALLEEVQIRDPERVLKSYPHQLSGGMR
                     QRVLIAAAFGLEPKLVIADEPTTALDVTVQKQILRLIRLLQERHGTSVLFVSHDLGVV
                     AKICDRLTVLYMGRAMEQGATEEVLSAPRHAYTKALLAANPRYDRPDTGLEPTPPEVV
                     AALRAEIAAFDAAAAEAGHG"
     gene            7072..7917
                     /locus_tag="VNY79_06625"
     CDS             7072..7917
                     /locus_tag="VNY79_06625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015340918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX72155.1"
                     /translation="MADLLVARGLVVTYAKPSGLLGRGPATPPVLHGVDISVGKGETV
                     GIVGESGSGKTTLGRALLGLVMPAAGSVVFDDVDISTLDERARRPLRRRMQMIFQDPM
                     SSLNPRHTIGRILIEPVLLHGLANDRAAALALVHGVLDRVGLARGTVDRYSYELSGGQ
                     RQRVGIARAVVLRPDFVLADEIVSGLDVSTQAQVLRLLQELTREMHLALAFISHDLSV
                     VRSICQRVVVMREGRVVEEGICEHVFAAPAAAYTRMLIDAIPLPAVDPGWLTRGASVE
                     AAATA"
     gene            8067..8639
                     /locus_tag="VNY79_06630"
     CDS             8067..8639
                     /locus_tag="VNY79_06630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019862997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HWX72156.1"
                     /translation="MAAAALAGATAARADGVPGLRGHDHTGITVPDIKQAADFFINVL
                     GCKEAMSFGPFADEKGNFVADLLNVNPRAVIHQITLVHCGYGSNIELFQYSSPEQKTV
                     TPENSDVGGYHIAFYVDDIKAAKDYLDGKGVKTFFGPFPVNEGPAAGQSIVYFLAPWG
                     LQMEIISYPKGMAYEKSAPVVLWSPRDPAK"
     gene            complement(9468..10619)
                     /gene="tgt"
                     /locus_tag="VNY79_06635"
     CDS             complement(9468..10619)
                     /gene="tgt"
                     /locus_tag="VNY79_06635"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008479 - tRNA-guanosine(34) queuine
                     transglycosylase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HWX72157.1"
                     /translation="MSDPFSFRLIATDGAARAGEMTTAHGAVQTPAFMPVGTQAAVKG
                     VHHDDVRAAGAELLLANTYHLMLRPSAERVAALGGLHTFMGWPGPILTDSGGFQVMSL
                     APLRKIAEEGVTFRSHIDGAMVELTPERAVEVQILLGSDIAMQLDECVRLPAGRDDIE
                     RAMKLSLRWAERCKRAFERAAPGRALFGIVQGGDDATLRGESMRALVDIGFHGYAIGG
                     LAVGEAQSVMLEVVSQTAAALPAAQPRYLMGVGTPGDLLEAMARGIDMFDCVLPTRNG
                     RHGLAFTRFGPINIKNARHADDPRPLDPESRCPAARDFSRAYLHHLFRSGEALGGTLL
                     SIVNLYYYQDLMAGARAAIAAGGFSDYAAETREQWAAKRDVDERDVDRS"
     gene            complement(10700..11053)
                     /locus_tag="VNY79_06640"
     CDS             complement(10700..11053)
                     /locus_tag="VNY79_06640"
                     /inference="COORDINATES: protein motif:HMM:NF012946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72158.1"
                     /translation="MLDVGTTKKIAQGAIKIVPGLSAITEDGAVFEGGNKAKFDAIIF
                     ATGYRPNYRDFVEDDHINAANDGTPNEQTRNSTIHFVGFRSPVSGLLREIAKEAVRIA
                     GHIVRQRKELAVSRA"
     gene            complement(11031..11840)
                     /locus_tag="VNY79_06645"
     CDS             complement(11031..11840)
                     /locus_tag="VNY79_06645"
                     /EC_number="1.14.13.-"
                     /inference="COORDINATES: protein motif:HMM:NF012946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_function: GO:0050661 - NADP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HWX72159.1"
                     /translation="MAETTDVVVVGAGPAGLAVAACLGKVGLDFIILERNLHVASSWR
                     RHYERLHLHTIKQLSSLPYCPYPKDYPRYVPRNLLIEYLDRYAAHFDLHPRFGENVRS
                     VRRNEDVWIVEGTSCWIHAPHVVIASGLNTEPVSPVVPGAEKFTGRLIHSADYVNAKP
                     FAGQSVLVVGMGNTGAEVALDLSEGGAQPTISLRGGVHIVPRDLFGVPIQVIATLASK
                     ALPMRANDALFPFILDLARQPGEVWPQASAARHPATNCRVGQDSGAGRRHN"
     gene            complement(11986..12768)
                     /locus_tag="VNY79_06650"
     CDS             complement(11986..12768)
                     /locus_tag="VNY79_06650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018407288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX72160.1"
                     /translation="MRRRHLLAALPLFATGLIKASAARAAPVLRVGAALPDPPFEFNA
                     NDGPAGFDITLMQRIAGLIGREWQLVPYKGTDFNGIFAGLDDGSYDCIASGTTITPER
                     SKVADFCPPYAVSGQSLVADVSRHPNLHGIGDLKGLVIGVQEGNTSQPVADKLVAEHR
                     AARVRVYAYDEIEKALDDLSSGGCDAFMKLAPVTAWFVRERPKLKILQTGITVERLGI
                     CVRKGNAALHDGISKAQAALAADGTLAALIKQWLGAGATLPA"
     gene            12928..13284
                     /locus_tag="VNY79_06655"
     CDS             12928..13284
                     /locus_tag="VNY79_06655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HWX72161.1"
                     /translation="MHAFKLYTGEDSASHVLEGTLTLDQRTDVIAAHFKESPPHSSFD
                     WHDAPETQYVITLTGTLEFTTRDGETFIIRPGDVLVATDTAGTGHGWRLIDDAPWRRC
                     YIVLKPGAADLFAARA"
     gene            complement(13411..14190)
                     /locus_tag="VNY79_06660"
     CDS             complement(13411..14190)
                     /locus_tag="VNY79_06660"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: protein motif:HMM:NF005559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HWX72162.1"
                     /translation="MVAWRDQVALVTGGGRGIGRATARLLAERGAAVCVNFAANADAA
                     ESLVAEIAAGGGRAIAARGNVAQAAAVDAMVARTEKELGPVTILANNAGVAWQGTLDT
                     YDRERATQMREVNVEGVINTTRAVIGSMRARRYGRIVNVSSIAATGTALPGNAFYAAT
                     KAEVAILTRRFALELGPHGITVNAVAPGFVRTDLTQRGRGAEDWQGTEARLASRAMMG
                     RIGEPEDVANAIVFLASPESGWITAQMLTVDGGRMDYIGHG"
     gene            complement(14212..>15145)
                     /gene="queA"
                     /locus_tag="VNY79_06665"
     CDS             complement(14212..>15145)
                     /gene="queA"
                     /locus_tag="VNY79_06665"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HWX72163.1"
                     /translation="ANDTKVIPASLHGRRIGRGTHEPAIAATLTRRLDGSRWNALVKP
                     GKRLAVGDVVRFGSEGRVCFLDQLDATVEAKGEGGEVTLAFAFHGPVLDEALAERGDM
                     PLPPYIAGRRTADEQDRTDYQTVFAREEGSVAAPTAGLHFTDAVVEALETRGGGLHKV
                     TLHVGPGTFLPVKAEDTSAHKMQPEWGSVGAETAAALNAARRAGGRIVAVGSTALRLL
                     ESAAAADGTLAAFSGETALFVTPGYRFRTVDVMLTNFHLPRSTLFMLVSAFSGLDTMR
                     RAYAHAIETGYRFYSYGDACLLFPAAADDKTRIE"
BASE COUNT         2602 a         5059 c         4829 g         2655 t
ORIGIN      
        1 ggcaccgagg tcgattgggc gtgccagccc tgggattcag caagctccac aatccagtcg
       61 gtcagcacgc cgccaccctg gccgcccagg gcgagaaccg caatgcagat cggccgctcg
      121 gtagtaaatc gcgtcagggt ccgcgatacg tcgttcatgt ctcgcgattc ccgcgtcagt
      181 cggcgaagac gatacggccc gtttcgcgac gacgctgcag gaagccgatg accgcgcgcc
      241 gcagcccgga gaagaggcga tcgaaccggt tcgggttgtg gatgatgtcg gcgcgataga
      301 acgacgggca gagcacggcc gcctccgaca cctcgccgca attgccgcag ccgacgcaat
      361 tgttgtcgat cgccgcgacc ggatcgtcct tcagcgggtc gtcggtgtgc ttgaccgaga
      421 gcgacggaca gccggagagc cggatgcagg cgtgatcgcc ggtgcacacg tcctcgtcga
      481 cgccgaagcg ctcctgcacg atgcgctcac cctcgcggac cgacttctgg aacagcggct
      541 tcacccggcg ctgcttgttg agcatgcatt ccgaggacgc gacgatcacc ttcgggccgc
      601 tctccttgga ggtgagcgcc tcgcgcagga tgtcgcgcat gcggccaacg tcataggtgc
      661 ggtcgagatg gcgcacccat ttgacgccga tgcccttcac cgcgctgacg atggtgttgt
      721 tggtcgagcg cgccgggttt agcgcacgcg aggacatgat gtcctggccg ccggtcgcgg
      781 ccgagtagaa attgtccacg accatgatga cgccgtcgtg cttgttgtag acggcattgc
      841 cgacgctcga ggacagcccg ttgtgccaga agccgccgtc gccgatgatc gagatcggcc
      901 gcttgtcggc cttgacgttg aaggcggagg acgacgccgg gccgaggccg tagcccatcg
      961 tcgtcgcgcc gatgttgaac ggcggcaggc tggcgaacag gtggcagccg atgtcgccgg
     1021 cgacgttgtg ctcgccgagc tccttctgca cgagcttcat ggcggcgaag atcggccgct
     1081 ccggacagcc gatgcagaag ccgggcggcc gcggcggcac ggtcttggcg agctcctgga
     1141 tcttcgggtc ggcgagcacg ccggaagcgt cgggcgtcgg cggcgcgttg ccgagcagcg
     1201 ccggcgcgta ccgctcgaga aagctcttga tgcccttggt caccagcgcc ggcgtgtatt
     1261 cgccggccat cggcagcacg tccttgccgg aaatcttggt ctggatgtcg cggcggcgca
     1321 ggatggtgtt gagcgcctgc tcgatgaact cgggctggcc ctcctcgacc atgaggatcg
     1381 ccttcttgtc gatggcgaaa gtggcgacct cgtcatcgat cagcggatag gtgacgttga
     1441 gcacgtagat cggcaccgcg gtctcgccgt agacgtcggc gaggccgagc tgctgcagcg
     1501 agcgcatcac cgaattgtag aagccgccct gcacgacgat gccgacttcg gcgacttcgg
     1561 gaccgaagaa ttcgttgagc ttgcgctcct tgatgaattt gaccgcggcc ggccagcgct
     1621 gctcgatctt ctcgcgctcg tgcaggtagg aggccggcgg cagcaccacg cgctcgatat
     1681 cgcgccgcgg cttttccagc gcctcgcgca aggaaaaact cggccgcttg ttttccttgg
     1741 cggtgaagcg gccgtggacg tggcaggcgc ggatgcgcac ctcgagcatc accggcgtat
     1801 gcgagacctc ggatagctcg aagccgtcct cgaccgcctt gacgatcgtg ggcagattgg
     1861 gccgcgggtc gagcagccaa acctgcgact tcatcgcgta ggggtgggaa cgctcctgca
     1921 tgatcgagga gccttcgcca tagtcctctc cgatgatgat cagtgcccct ccggtgacgc
     1981 cgccggacgc caggttggcg atggcgtcgg aagcgacgtt gatcccgacc ggggatttga
     2041 aggtgaccgc gccgcggatc ggatagtgca ccgaggcggc aagcatggcc gcggcggcgg
     2101 cctccgacgc cgagttctcg aagtgcacgc cgaggtcgtc gagcacgtcc ttggcgtcgg
     2161 ccagcacgtc catcaggtgg gagatcggcg ctccctggta gccgccgaca taggagacgc
     2221 cggactgcag cagcgccttg gtgatcgcga gaattccctc gccgcggaat tcctcgcctt
     2281 cgcccagctt gaggtcctca acctcgcggg caaacgaccg ctccgccatg aaaaaccctc
     2341 cgcgtcgcca gcgtcgattg aaaaagtggc cgtccgcctg ttacttatgg gaccttccca
     2401 ggcatcttgc aacgcctcca aggaaggccg gcggagcccc gatcgcggaa ccggggcgct
     2461 gctccgcggc acggctgaac cccatctaag ttgcggcaac gacggcaaaa agaccggcca
     2521 atgccgctgc gtcagcttgt cctggtgttg ttttaagtct aaagtattcc gtgcacgggt
     2581 ctcggccatc tgtaccgaac gcggtatagt cgagtgcaag ccatcgccgg cggcaggcgg
     2641 cagtcaaaac ggggagtctt caatatgttc aacgttacgc ggcgtcaggc cctcgcggcg
     2701 agcggcggcc ttgtcggagc catgcttgcg cccaagcact ttgccagcgc ggccggcaat
     2761 acgctcaaca tcgcctacaa cgtcaacctg ccgtccttcg accccgatgt cgggccctcc
     2821 tcggtcaatc cgacgatcca ggcgatctat cgctcgatct tcgaccagta catcggccag
     2881 aagccgaacc tcgcgttcga acccggcctg ctgaccggct ggggctggag cgacgacaag
     2941 tccaaggtat ggatggacgt gcgggagaac gtcgtctggc atgacggcac cccgttcacc
     3001 cccgacgacg ttatttggtc gatccagcgc gaaggcaagc cggacggcgg caacccggtg
     3061 gcgttcatct gggccggcat cgacaacttc aaggtcgatg gccaccgcat caccgccgac
     3121 gtgaagaact acgatccggt gctgttcaag tggatggcgt tcctcaccgg ctacattctg
     3181 cccaaggcct attacgagaa ggtcggcccg cagggcttcg agaagaagcc gatcggaacc
     3241 ggcccctaca tagtcgatgc ctacgagggc aacgcctatc tgcggctgaa ggccaatccg
     3301 aaatactggg gcggcaagcc cgcgttcgag accgtggtgt tcaagtttgt ccccgatgct
     3361 acgagccgcg tcgccgagat cgaaagcgga tcgtcggacg tcacgctcga agtgccgtac
     3421 gaagagttcg accgcctcaa gggcaaggcc ggcctcaagg gcgtggtgac gccgatttcc
     3481 gacatcgcgc agatcttcat caccaacggc ggcgtcatgg acgacaagaa cgtccgcctg
     3541 gcgatgtgtc acgccgtcga caagcaggcg atcatcaagc ggctgctgcg cggctatggc
     3601 gtcgccatcg acacgctcga ggcgccggaa tatgctgcct tcgatccaac catcaaggtg
     3661 tcgcacgatc cggcgctcgc cgcgaagctc cttgccgcca gcggctattc caaggagaag
     3721 ccggtcaagt tcaccatcca gaccacgcgc ggcttcaagc ccaaagacta cgagatgatc
     3781 caggcgatcg tcggcatgtg gcgcaatgtc ggtatcgacg ccaacatcga gatctacgag
     3841 atcgccaagc acttcgagct gcgcatgtcg cacaagctcg cgccggcggc gttctacaat
     3901 tggggcaacg cgatcggcga tccgaccact tcgaccgggt tcgcgatgtt ctcgaaatcg
     3961 ccgcactcgg cgtggcactc cgacgatctc gacgccaaga tcggcccgct ctggggcgag
     4021 aaggacgaga ccaagcgcat ccagggctgg aaggacgtcg accgctacat cgccgagcag
     4081 ggctacatcc tgccgctgct gcaatacgcg cagccgatcc tctacaagtc cgatctcaag
     4141 gtgacaccga acgtttccgg agcgttgcaa ccgacgctgg tcgcgaagtc ctaaaagccg
     4201 cgtcgatgcg gtccgccgcc gcgccggggc gcgcggcggc aatcggcggg gtcagtcgca
     4261 aggaccgtgc atgctgctcg ccgtcgtcgt caaccgcatg gccatggcgc ttgtcacgct
     4321 ggcgggcgtg gcggttgtga tcttcgtcct gctgcgcgtg gtgccgggcg atcccgtcgc
     4381 catgatgatc tcgccgggcg cgagcgcggc cgacatcgtg gcgctcaagg cgcactacgg
     4441 cctcgatgcg ccactcccta cccagttctg gatctggatc agcggggtgg tccacggcga
     4501 tttcggcact tcgatcacgc tccacgtcta cgtgaccgac gtgctcgcct cgcggcttcc
     4561 cgccaccatt gagcttgcga tcatggccct ccttgtcgcc gtcgtgctcg gcggcggcgt
     4621 ggccgttgcc ggcacgctga tgcggcgcac cgccggcgag acggtcatcg acggcctgaa
     4681 cagcatcatg ctggcggtgc ccgacttcat ctgggcgctg gcgctggttc tgctctttgc
     4741 ggtcgcgatc ccggtgctgc cgctcaccgg ccgcatcgat ccggcgctcg ccgaaggttt
     4801 tgccacgcgg ttctacctca cagaaagcgt cctcaccggc cgcttcgccg acgccggcaa
     4861 cattttgagc cacatggcga tgccggcgct ggcgctggcc ttgccgctcg ccgccgtgat
     4921 cgtgcgcctg ctcaagcagt cgctgaagga agccatggtg caggactacg tgctgcttgc
     4981 ccggatcaag ggcttccgcg aattgcacct cgtgctgcaa gaggcgctgc gcaacgccgt
     5041 cggtccgact ttagcgctgt ccggcgtgca gttcaccttc ctgatcggcg gcacggtcat
     5101 cgtcgagcgt atcttctcct atcccggcat cggcaacctg gcgatcgatg cggtcatcaa
     5161 ccgcgacttc ccgctgatcc agggtttggt gctgctgttc ggattgatct tcatcctggt
     5221 caatatgggg gtcgatctcg cggtggcggc gctcaacccg cgcctgcgtc atgcctgagc
     5281 cggaaccggc accccgtgga gcattggtca ccaaaacaga cgatcacgga tgccggcccg
     5341 cagccgccga cggccgtcga gcggctgctg cgcgatccca aggtcgtcgg cgccggcggc
     5401 ttcatcgtgt tcctgatcgt tctcgccctc gcggcgccgc tggtcgcgcc gatggatccg
     5461 ctggcgcaaa acctcgttct tgccaccgtg ccgccggccg gctttgccga gagcgaaccc
     5521 ggctatctgc tcgggaccga cgggctcggg cgcgacgtgc tttcgcgcgt catcttcggc
     5581 acgcaggtct cgcttacggt cgcgttcgtc gccgccgggc tcgcctgcct catcggctcg
     5641 ctgctcggcc tcctcgccgg ctttctcggc ggcttcgtcg acgcgctgat ctcgcgcctg
     5701 gtcgatatct ggatggcctt cccgccggtg ctgttgtcga tcctgctggt cgcggtgctc
     5761 ggcaccggcc tgcactccgt gatcgccgcc atcgtggtga tcgactggac gcggttctgc
     5821 cgtgtcgtgc gtactgaaac catgggccag gcgcagatgg actacgtggt cgcggcgcgc
     5881 accatcggct tcgcgcgccc ggcaatcctg ttccgcgaga ttttgcccaa tgtcgctccg
     5941 gttctcattg cgctgctcac gctcgaaatg ggcatcgccg tcgtggtcga agcgatcctc
     6001 tccttcgtcg gcctttcggt gtcctccgac accccgacct ggggcggcat gatcgccgag
     6061 ggccgccaga tcgtgcatga ggcgtggtgg gtgctagcgg cgccgcttgc ggcgctgttt
     6121 gcgaccgtcg tcgccttcaa tcagctcggc gacgggctgg cgcgcagcct cgatccggtg
     6181 ctgcgccgat gacgccgccg cggcttgcca tagaagcgct ctccgcgatc tcgctccgcg
     6241 acggcgaccg gccgattctg cggcgggttt cgctctccgt cggcgtcggc gaggtgcatg
     6301 gcgtcgtcgg cgagagcggc gccggcaagt cgaccatcgc caaggcgatc ctcgggatcg
     6361 ttccctcgca ggtgcggatc accggcggca ccatcaactt cgaaggccaa aatctcctct
     6421 cgatgccggc gaaggcgttg cgcgcggtgc tcggccgcga catcgcgctc gtgccccagg
     6481 atccgtcgac ggcgctcaac ccgtcgcgcc ggatcgacgc gcaattgacc gacggattgc
     6541 gcctgaagcg cggcctctcg gcgcgcgaag cgcgcctgcg cgcgctcgcg cttctggaag
     6601 aggtgcagat ccgcgatccg gaacgcgtgc tcaaaagcta tccgcaccag ctttcgggcg
     6661 gcatgcgcca gcgcgtgctg atcgccgccg cgttcgggct cgagccgaag cttgtcattg
     6721 ccgacgagcc gacgaccgcg ctcgatgtca cggtacagaa gcagattctc cggctcatcc
     6781 gcctgctgca ggagcgtcac ggcaccagcg tgctgttcgt ctcccatgac ctcggcgtgg
     6841 tggcgaagat ctgcgatcgc ctgaccgtgc tctacatggg ccgggcaatg gaacagggcg
     6901 ccacggagga ggtgctcagc gcgccgcgcc acgcctatac caaggcgctt ctcgccgcca
     6961 atccgcgcta cgaccggccc gataccggtt tggaaccgac gccgccggag gtagtagcag
     7021 cgctgcgcgc tgaaatcgcc gcgttcgatg cggccgccgc ggaggccggc catggctgat
     7081 ctgctggtcg cgcgcggact ggtcgtgacc tacgcaaagc cttccggcct gctcggccgc
     7141 ggcccggcca cgccgccggt gctccatggc gtcgacatct cagtcggcaa gggcgagacc
     7201 gtcggcatcg tcggcgagtc aggctccggc aagaccacgc tcggccgggc cctgctcggt
     7261 ctcgtcatgc cggcggccgg ctcggtggta ttcgacgacg tcgacatcag cacgctcgac
     7321 gagcgcgcgc ggcggccgct gcgccggcgc atgcagatga tcttccagga cccgatgtcc
     7381 tcgctcaatc cgcggcatac gatcggacgc atcctgatcg agccggtcct gctccacggc
     7441 ctggcaaacg accgagcggc ggcgctcgcg ctggtgcacg gcgtgctcga tcgcgtcggc
     7501 ctcgcccgtg gcacggtcga ccgctactcc tacgagcttt ccggcggtca gcggcagcgc
     7561 gtcggcatcg cccgcgccgt ggtgctgcgg cccgatttcg tgctcgccga cgagatcgtg
     7621 tcggggctcg acgtttccac ccaggcgcag gtgctgcggc tccttcagga gctgacgcgc
     7681 gaaatgcatc tcgcgctcgc cttcatcagc cacgatctct ccgtagtccg ctcgatctgc
     7741 cagcgcgtcg tggtgatgcg cgaaggccgc gtcgtcgagg aaggtatctg cgagcacgtc
     7801 ttcgcggctc cggccgccgc ctatacgcgc atgctcatcg atgccattcc gctgccggcg
     7861 gtcgatcccg gatggctcac ccgcggggcc tcggtggagg ccgccgcgac cgcctgacaa
     7921 gcgcatgatt ccgcgaccgg ttatcgcgct cggaaagtca tgcccgaaca accatcgcgc
     7981 cgaggatctc gggcaacccg gcgcgatctc ccatcccagt cccgacaagg agaagtaccc
     8041 gtcttcgata cgctcgctgt ttcgccattg ccgccgccgc gctcgccggc gccaccgccg
     8101 cccgcgccga cggcgtgccc gggttgcgcg gccacgacca taccggcatc accgtgcccg
     8161 acatcaagca ggccgccgat ttcttcatca acgtgctcgg ttgcaaggag gcgatgtcgt
     8221 tcggcccgtt tgccgacgag aagggcaact tcgtggccga cctgctcaac gtcaatccgc
     8281 gggcggtgat ccaccagatc accctggtgc actgcggcta cggctccaac atcgagctgt
     8341 ttcaatacag ttcgcccgag cagaagaccg ttaccccgga gaacagcgac gtcggcggct
     8401 atcacatcgc tttctatgtc gacgacatca aagcggcgaa ggactatctc gacggcaagg
     8461 gcgtaaaaac cttcttcggt ccgtttccgg tgaacgaggg tccggccgcc ggccaaagca
     8521 tcgtctattt cctcgcgccc tggggcctgc aaatggagat catcagctat ccgaaaggga
     8581 tggcctacga gaagtcggca ccggtggtgc tgtggtcgcc gcgagatccg gcgaagtgag
     8641 gttcctctcc cccggagcgg gaaaccaggt gaaaagtact gacatctccg gcacatccgc
     8701 tgggtccccg cttccgcggg gacgagcgga tgggagtaac caggtcaatt ttcataaact
     8761 tgcggcaacg cgcgtcggca acccgcgctg cactgcagca tgccgccgcc acaagagttt
     8821 cacgaaggcg tcgcagcacc gccacagacc ttgcgcagaa tgaatgctga tatcgggtga
     8881 aatcggggac cggagggggt gcgtcgagga ggatcgacga tgaccatcca gtctgcctgt
     8941 tgcgcagagg aaaccgcgct ccgcaccgcg actgaagatt tcggccgacc caactgcccg
     9001 cattgcggga gtgtgttgct tgtggccgaa caatccgagt ttaatctcaa aggccgcatc
     9061 cgccacgcct ggtcgtgcga cgattgcggc cacgaattcg tcacctcgat ccggctgcgg
     9121 cggcaacact aggccgcggc gggaaccgtt cgcgggctgc atcgttaaaa agcgtaacag
     9181 tatagtccta acgtaacgat tgccgtggaa ggcggctcta tcgggaaaaa accgcaccgc
     9241 caccgcctct ttccacgggc ccgaaccagg gaggaaacgc ccgccagtcg cggactccgg
     9301 gcgacaaggt gcacgggcca actgtaggat gtatcgcgcc cgtcgttgcg tccgttgaag
     9361 gcgcgcatga gtgacccgcc ggcccgcgtt gatgcggccg gcgggttctt tttcgtcagt
     9421 caaggttgtt ctcggtccca caccgcgctt gaaggaatcg cacgccctca ggaccgatcg
     9481 acatcgcgct cgtcaacgtc gcgcttggcc gcccattgtt ctctggtctc ggcggcgtag
     9541 tcggaaaaac cgccggccgc gatcgcggcg cgcgcccccg ccatcaggtc ctgatagtag
     9601 tacaggttga cgatagacag gagcgtgccg ccgagcgcct cgccgctgcg aaagaggtga
     9661 tgcagatagg cgcgggaaaa gtcgcgcgcc gccgggcaac ggctttccgg gtcgagcggc
     9721 cgcggatcgt cggcgtggcg cgcgttcttg atgttgatcg gaccgaagcg cgtgaaggcg
     9781 aggccgtgac ggccgttgcg cgtcggcagc acgcaatcga acatgtcgat cccgcgcgcc
     9841 atcgcttcga gaaggtcacc gggcgtaccc acccccatga gatagcgcgg ctgcgccgcc
     9901 ggcagcgccg ccgcggtttg ggaaaccacc tcgagcatca cgctctgcgc ctcgccgacg
     9961 gcaaggccgc cgatggcgta gccgtggaag ccgatgtcaa cgagcgcacg catgctctcg
    10021 ccgcgaagtg ttgcgtcatc gccgccctgc acgatgccga acagtgcgcg gccaggggct
    10081 gccctttcga aggcgcgctt gcatcgctcc gcccagcgca gcgacagctt catcgcccgc
    10141 tcgatgtcgt cgcgcccggc cggcagccgc acgcattcgt cgagctgcat ggcgatgtcg
    10201 gagccgagca gaatctgcac ctcgacggcg cgttccggcg tcagctccac catcgcgccg
    10261 tcgatatgcg agcggaaggt gacgccctcc tccgcgattt tgcgcagcgg cgcgagcgac
    10321 atcacctgga agccgccgga atcggtgagg atcggacccg gccagcccat gaacgtatgc
    10381 agcccgccaa gcgcggcgac gcgctcggcc gaaggccgca acatcaggtg ataggtgttg
    10441 gcaagcagaa gctcggcacc ggcggcgcgc acgtcgtcgt gatggacgcc cttgaccgcc
    10501 gcctgcgtgc cgaccggcat gaaggccggc gtctgcacgg cgccatgcgc ggtcgtcatc
    10561 tcgcccgcgc gcgcggcgcc atcggtggca atgaggcgga aggagaaggg atcggacatc
    10621 ggcaatcaga cgtgatgcgg cagccataga ttgagcggaa gagcccagca agtccgcagg
    10681 gcgggcgcgc ttcccgaact catgcacggc tgacagccag ttcctttcgc tgacgaacga
    10741 tatggcctgc gatccggacc gcctccttgg cgatttctct gagcaagcca ctgacgggac
    10801 tccgaaatcc gacaaaatga atagtcgagt tccgagtctg ctcgtttggt gtcccgtcgt
    10861 tggctgcgtt gatatggtcg tcctcaacaa aatctcgata gttgggacga tatccggtcg
    10921 cgaagatgat cgcgtcgaat ttggctttgt ttcctccttc gaacacagcc ccgtcctcgg
    10981 tgattgcaga taggcccggc actatcttga tcgcaccctg ggcgatcttt ttagttgtgc
    11041 cgacgtccag caccggaatc ttggccgact cggcaatttg ttgcaggatg ccttgctgcg
    11101 gacgcctgag gccatacttc gccgggttgc cgagccaggt caagaatgaa cggaaagagc
    11161 gcatcgttgg cgcgcatggg gagagctttg ctcgcgagcg tagcgattac ttgaatgggt
    11221 acgccgaaaa ggtcacgtgg gacgatatga acgccgccgc gcagcgagat cgtcggctgc
    11281 gcgccgccct cggacaggtc gagagcaacc tctgcaccgg tgttccccat gccaacgacc
    11341 aggacggact ggccggcaaa cggcttggca ttgacgtagt ccgcgctgtg gatgagcctg
    11401 cccgtgaact tctctgcccc gggaacgact ggactcaccg gttcggtatt caatccggat
    11461 gcaatcacga catgcggagc gtggatccaa catgaagtgc cttccacaat ccaaacgtcc
    11521 tcatttcggc gcacagagcg cacgttctcg ccgaaacggg ggtgtagatc aaagtgcgca
    11581 gcataacgat ccaaatattc gatcaacaga tttcggggaa cgtagcgcgg atagtctttc
    11641 ggataaggac aataaggcaa agacgacagc tgttttatcg tatgcaagtg cagccgctcg
    11701 tagtgccgac gccaggacga ggcaacatga agattccttt ccaggataat gaaatccaaa
    11761 ccgaccttcc cgagacacgc cgcgaccgcg agcccagctg ggccggcacc gacgacgaca
    11821 acgtcagtgg tttctgccaa tgactcctcc cactccgtgg aacagcgcca acccgtacgc
    11881 ccttcttccg tctcgcatgt gggacccaga catatcccaa tgcgtgaacg cctgttcgca
    11941 gaatgcgctt caaagcgcga agcccgcacg ggatcagcgc ggtactcacg ccggcagagt
    12001 agccccggcc ccgagccact gtttgatcag cgcagccagc gttccgtcgg ccgccagcgc
    12061 cgcctgcgcc ttgctgatcc cgtcgtgcag cgctgcattt cccttgcgca cacagatgcc
    12121 gaggcgctct acggtgatcc cggtctggag gatcttgagc ttcggccgct cgcgtacgaa
    12181 ccacgcggtg accggcgcga gcttcatgaa agcgtcgcag ccgccactcg acaaatcatc
    12241 gagcgccttt tcgatttcgt cataggcata gacccgcacg cgcgcggcgc gatgctcggc
    12301 aaccagcttg tcggcgactg gctggctcgt attgccttcc tggacgccga tcaccaggcc
    12361 tttgaggtcg ccgatgccat gtaagttcgg atgtcggctg acatcggcaa cgagcgactg
    12421 gccagagacc gcatagggcg gacagaaatc ggcgaccttg ctgcgttccg gcgtaatggt
    12481 ggtgcctgag gcaatacagt catagctgcc gtcgtcgagt ccggcgaaga tgccgttgaa
    12541 gtcggtgcct ttgtagggca ccaattgcca ttcgcggccg atcaggccgg caatgcgctg
    12601 catcagcgta atatcgaaac ccgccgggcc gtcgttggca ttgaactcga agggcgggtc
    12661 gggaagcgcc gctcccaccc gcaaaaccgg agccgctctc gcggcgctcg ccttgatcag
    12721 gccggtcgca aatagcggta aggcagcaag caaatgacgg cgcctcatga ggactttatc
    12781 ggtcaggccg agacaacgat gggttaggca tgactatagc ctgaaggtgg agcgccgttg
    12841 aggccccagg cggttcggca agaatagttc tacaatcgcg gagggtcgcc tggccatgcg
    12901 ccggtgcggg cgcgcgagag tgccgcgatg cacgccttta agctctacac cggtgaggac
    12961 agtgcctcgc acgtgctcga aggcacactg acgctcgatc agcgcaccga tgtcatcgcc
    13021 gcacacttca aggaatcgcc gccgcattcc tccttcgact ggcacgacgc cccggagacg
    13081 caatacgtca tcacgctcac cggcacgctc gaattcacca cccgcgacgg cgagactttc
    13141 atcatccggc ccggcgacgt gctggtcgca accgacacgg ccggcaccgg ccacgggtgg
    13201 cgcctgatcg acgacgcgcc ctggcgacgc tgctacattg tgctcaagcc gggtgcggcg
    13261 gatctgtttg cggcgcgggc gtagcacgcg cgacatcgcc ccatgctacg gacactccgg
    13321 atgcctacgg cgcatacccg gatcgaggaa gctgaaacgg gcgccgtcct cgcgcaaacg
    13381 gcaaaccccg cgcgcggcac ggcgcccaat ctaaccgtgc ccgatgtagt ccatccgtcc
    13441 gccatcgacc gtcagcatct gtgcagtgat ccaacccgat tccggtgaag ccaagaagac
    13501 tatcgcgttg gcaacgtctt ccggttcacc gatccgaccc atcattgcgc gtgaagcgag
    13561 acgggcctca gtgccctgcc aatcttccgc gccccggccg cgctgggtca ggtcggtgcg
    13621 gacaaaacct ggcgcaacgg cgttcacggt aatgccgtgc gggccaagct ccaaggcaaa
    13681 gcgtcgcgtc agaatcgcca cctcggcttt ggtcgccgcg tagaatgcgt tgccgggcag
    13741 cgcggtgccg gtcgccgcaa tcgaactcac attgacgatc cggccatagc ggcgcgcacg
    13801 catgcttccg atcaccgcgc gggtcgtgtt gatgaccccc tcgacattca cctcgcgcat
    13861 ctgcgtcgcc cgctcccggt cgtaggtgtc cagtgtgcct tgccatgcta cgccggcgtt
    13921 gttcgccagg atcgtcaccg gtcccaactc tttttccgtg cgggcgacca tcgcatcgac
    13981 cgcggcggcc tgcgcaacat tcccccgcgc ggcgatcgcc cgccctcccc cagccgcaat
    14041 ctcggcgacg agcgactctg ccgcgtcagc attcgcggca aaattaacgc acaccgccgc
    14101 gccacgctct gccagcaacc gcgccgtagc tcgaccgatt ccccggccgc ccccggttac
    14161 cagggccact tgatcgcgcc atgcaaccat gtttccgcct ctcagccggc cctattctat
    14221 gcgtgtttta tcgtcggcgg ccgcgggaaa cagcaggcag gcgtcgccgt aggaatagaa
    14281 ccggtagccc gtttcgatcg cgtgcgcata ggcgcggcgc atcgtgtcca ggccgctgaa
    14341 ggcagagacc agcatgaaca aggtcgagcg cggtagatga aaattggtca gcatgacgtc
    14401 gacggtgcgg aagcggtagc cgggcgtgac gaacagcgca gtctcgccgg agaaggccgc
    14461 gagcgtgccg tccgcggccg ccgcgctttc gagcagccgc agcgccgttg agccgacggc
    14521 gacgatgcgg ccgccggcac gccgcgccgc gttgagcgcc gccgccgtct ccgcgccgac
    14581 gctgccccat tccggctgca ttttgtgcgc cgacgtgtct tccgctttga cgggaaggaa
    14641 ggtacccggc ccgacgtgga gcgttacctt gtgcaggccg ccgccgcgcg tctctagcgc
    14701 ctcgacgacc gcgtcggtga aatgcagccc cgcagtcggc gcggcgaccg acccctcctc
    14761 ccgcgcgaac actgtctgat agtcagtgcg gtcctgttcg tcggccgtgc ggcggccggc
    14821 gatgtagggc ggcagcggca tgtcgccgcg ttcggcaagc gcctcgtcga ggaccggccc
    14881 gtgaaacgca aaggcgagtg tgacctcgcc gccctctcct ttcgcctcca ccgtggcgtc
    14941 gagctggtcg aggaagcaca cccggccctc gctgccgaag cgcacgacat cgccgacggc
    15001 gaggcgcttc cccggcttca ccagcgcgtt ccagcgcgag ccgtcgagcc gccgggtcaa
    15061 tgtcgccgca atcgccggct cgtgcgtgcc gcggccgatg cggcggccgt gcaggctcgc
    15121 cggaatgact ttcgtgtcgt tcgcc
//
LOCUS       DATMQB010000220         2130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2247324, whole genome shotgun sequence.
ACCESSION   DATMQB010000220 DATMQB010000000
VERSION     DATMQB010000220.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2130
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2247324"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..342)
                     /locus_tag="VNY79_06670"
     CDS             complement(<1..342)
                     /locus_tag="VNY79_06670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HWX72164.1"
                     /translation="MQYRSVFRPGAFDGQRIIVTGGGSGIGRCTAHELASLGAFVALV
                     GRNHEKLSAVAAEISAAGYRPPTLHVCDIREEKQVNATIAGVLSAGAPVHGLVNNAGG
                     QFMAPLKDISLN"
     gene            425..1567
                     /locus_tag="VNY79_06675"
     CDS             425..1567
                     /locus_tag="VNY79_06675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX72165.1"
                     /translation="MILHSPFYDSAHEAFRDQVRRFVRTEIEPHVDEWDEAGTFPREL
                     YRKAAQMGLLQLNYPEELGGVPADRFFSIILSQELARCGSGGVCASLMSHTIGLPAII
                     KFGSEALKHKVVPSVLAGEKIAALAVTEPGAGSDVANLRTSARRDGDDFVVDGEKAFI
                     TSGMRADYLTVAVRTGGAGRSGISLLLVEGTTPGLSRTPLRKMGWWASDTAMLQFDNC
                     RVPVAHLIGTEGAAFGGIAMTFNDERLGLAASAIGFAAVAYEEALAHARLRHTFGKPL
                     IQHQVIRHKLVDMRQRIAASQAFLENVAWQMDQNLNPVADISLLKNQATQTLAFCAAE
                     AVQIFGGSGFMRGVKVERIYREVKVYAIGGGAEEIMKELASRQLGF"
     gene            1631..>2130
                     /locus_tag="VNY79_06680"
     CDS             1631..>2130
                     /locus_tag="VNY79_06680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004664 - prephenate dehydratase activity
                     [Evidence IEA];
                     GO_process: GO:0009094 - L-phenylalanine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase domain-containing
                     protein"
                     /protein_id="HWX72166.1"
                     /translation="MAKRSSKRRKVAFQGEPGANSDLACREAYPAYEPLPCPTFEDAF
                     AAVRSGRAALAMIPIDNSVAGRVADIHHLMPESGLHIVAEWFLPVQHQLMALRGATLK
                     TIKTVESHVHALGQCRNIIRTLGIKAVVAADTAGAAREVAEAGDVTRAALATALAAKI
                     YGLQIL"
BASE COUNT          358 a          700 c          717 g          355 t
ORIGIN      
        1 gttgagcgag atgtccttga gcggcgccat gaactggccg ccggcattgt tgacgaggcc
       61 gtggaccggc gcgcccgcgc tgagcacgcc ggcgatggtc gcgttgacct gcttctcctc
      121 gcggatgtcg cagacgtgaa gagtcggcgg ccggtatcca gccgcgctga tttccgcggc
      181 gacggcgctg agcttctcgt ggttgcggcc gaccagcgcc acgaacgctc ccaacgaggc
      241 cagttcgtgg gcggtgcagc gcccgatgcc gctgcctccg ccggtgacga tgatgcgctg
      301 gccgtcgaac gcgcctggcc ggaacaccga acgatactgc atggcgtgcc cctcgtgctc
      361 cccactatcc tcagcggccc agtcaggcaa gagtccgatc cagggaccga acggggaggg
      421 aaggatgata ctgcattcgc ccttttacga ctccgcacat gaggcgttcc gcgaccaggt
      481 ccgccgcttt gtacgcacgg agatcgaacc acatgtggat gaatgggacg aggcgggaac
      541 ctttccgcgc gagctttacc gcaaggccgc ccagatgggc ttgctgcagc tcaactaccc
      601 cgaggaactg ggcggggttc ccgccgaccg gttcttttcg atcatcctca gccaggagct
      661 ggcgcgctgc ggttcgggtg gcgtgtgcgc gtcgctgatg agtcatacga tcggcctccc
      721 ggcgatcatc aagttcggtt cggaggcgct gaagcataaa gtcgttccgt cggtgctggc
      781 cggcgaaaag attgcggcgc ttgccgtgac cgagccgggc gcgggatcgg acgtggccaa
      841 tctgcgcacg agcgcgcgcc gggacggcga tgacttcgtc gtcgacgggg aaaaggcctt
      901 catcacctcc ggcatgcgcg ccgactatct gacggttgcc gtgcgcaccg gcggcgccgg
      961 ccgcagcggc atttctctgc tcctggtcga gggcacgacg cccggcctgt cgcgaacgcc
     1021 gctgcgcaag atgggatggt gggcctccga cacggcgatg ctgcaattcg acaattgccg
     1081 ggtgccggtc gcgcatctga tcggtacgga gggcgcggca ttcggcggta tcgccatgac
     1141 gttcaacgac gaacggctcg gccttgccgc ctccgccatc ggctttgccg cggtcgccta
     1201 cgaggaggcg ctcgcgcacg ccaggctccg ccataccttc ggcaagccgc tgatccagca
     1261 ccaggtcatc cgccacaagc tggtcgacat gcgccagcgg atcgccgcct cgcaagcgtt
     1321 cctcgaaaat gtcgcctggc agatggatca gaatctcaat ccggtcgcgg atatcagcct
     1381 gctcaagaac caggcgaccc agacgctggc tttctgcgcc gcggaagcgg tgcagatctt
     1441 cggcggttcg ggcttcatgc gcggcgtgaa ggtcgagagg atctaccgcg aagtgaaggt
     1501 ctacgcgatc ggcggcggcg ccgaggagat catgaaggag ctcgcctccc ggcagctcgg
     1561 attttgatcg aaggttgctg gcccaaccca ttgggcgtac tggtacgccg actacatctg
     1621 aagggtcttc atggcgaagc ggtcaagcaa acggcgcaag gtcgcgttcc agggcgaacc
     1681 gggcgcgaac tcggaccttg cctgccggga ggcctaccca gcctacgagc cgctgccgtg
     1741 cccgaccttc gaggacgcct tcgccgcggt gcgcagcggc cgcgccgcgc tcgccatgat
     1801 cccgatcgac aattcggtgg ccgggcgcgt ggccgacatc catcatttga tgccggagtc
     1861 ggggctccac atcgtcgccg agtggttcct gccggtgcag catcaattga tggcgctgcg
     1921 cggcgcgacg ctcaagacca tcaagacggt cgagagccac gtccacgcgc tcggccaatg
     1981 ccgcaacatc atccgcacgc tcggcatcaa ggcggtggtc gccgccgata ccgcgggcgc
     2041 ggcgcgcgag gtcgccgagg ccggcgacgt gacccgcgcg gcgctggcga cagcgctggc
     2101 ggcgaaaatc tacggcctgc aaatcctcaa
//
LOCUS       DATMQB010000221         6127 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4101932, whole genome shotgun sequence.
ACCESSION   DATMQB010000221 DATMQB010000000
VERSION     DATMQB010000221.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6127)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6127)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6127
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4101932"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1436)
                     /locus_tag="VNY79_06685"
     CDS             complement(<1..1436)
                     /locus_tag="VNY79_06685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72167.1"
                     /translation="MADNNFRSYRSRDPVAREGADQTARRSAGDPLAELARLIGKSDP
                     FADSGRHETDGAERADDARSSGLEWGADDNDPEQQRPAEERYVTPPRNEPLPSLGEAP
                     QERAYENEPPSGGRFFSGLAPRFNGFSEDDARDFPAVADTAGYQDEAQPALPTPDDRP
                     PVLPPRQAPAFPPPAPGERAAGEIQAAEVGEAYGADDYYDDAPTPRRRGGLVLVIAVL
                     GLAVLGTAGAFAYRAMFGGSMLPTLPPIIKAGNGPNKIVPGYGDARASNSAQTTVANT
                     GSSEKLVSREEQPVEIQEPSKTAPRVISTIPIAPNPNSLPAGASSIGAAPLVPAPAGA
                     ASAAAPPVIATVPAAPPPAPAPASAEPKKIHTVTIRSDQSGGTDAGAAASAPQHNSAR
                     SAKMSAAKPSAAASASTGSQPLSLAPDSQGDVAATPPALVPAPSRSRAHAAVATTTPA
                     GGTTGETTASGGYAVQVSSQRSEADAQSA"
     gene            complement(1530..3308)
                     /gene="argS"
                     /locus_tag="VNY79_06690"
     CDS             complement(1530..3308)
                     /gene="argS"
                     /locus_tag="VNY79_06690"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004814 - arginine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006420 - arginyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HWX72168.1"
                     /translation="MAAQNIYVDMLDRVRRAHDALIAAGVLPAGIDRSRITVEPPRDP
                     THGDMATNAAMVLAKDAGKKPRDLAQAIAEKLRSDPLIGSVEVAGPGFINITLKPAAW
                     IETLRIAVRLGQRYGRSEVGGGTPVNVEYVSANPTGPMHIGHCRGAVFGDALANLLVF
                     TGFEVTREYYVNDAGAQVDQLARSAYLRYREALGEAIGPIPEGLYPGEYLKPVGEALA
                     VQYGPALMATPETAWLPPVRVRAIEMMLAAVRADLASLGVNHDVFYSERSLAGENADQ
                     VAETIEWLRARGYVYEGRLPPPKGAPVEDWEDRDQTLFRSTAFGDDVDRPLKKSDGSY
                     TYFASDIAYHRTKLDRGFKTLIDVWGADHGGYVKRMQAAVAALSGQSAELDVKLIQLV
                     KLLRAGEPVKMSKRAGDFVTLREVVDEVGRDAVRFMMLYRKNDAVLDFDLAKVIEQSR
                     DNPVFYVQYGHARGQSVFRNARAVFSDLPADFADPAVVDAAALERLSDPAELALMRQI
                     ALYPRIVEAASAAHEPHRIAFYLFDLASEFHTLWTLGNTSPHLRFIIQNDRQMTVARL
                     ALVQGVVSVLASGLALLGVGAPNEMR"
     gene            complement(3347..4555)
                     /locus_tag="VNY79_06695"
     CDS             complement(3347..4555)
                     /locus_tag="VNY79_06695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016793 - triphosphoric monoester
                     hydrolase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase"
                     /protein_id="HWX72169.1"
                     /translation="MAIEAATPRARCACDPGQSRGRLYPEPASKGRSAFRRDCDRIIH
                     STAFRRLKHKTQVFVFDEGDHYRTRLTHTLEVAQIARALARALGLDEDLAEALALAHD
                     LGHPPFGHAGERALDECLAAFGGFDHNAQTLRVVTALERRYPAFDGLNLTWETLEGLV
                     KHNGPLTDRDGAPLGRYRAHGIPETILRYIQMQDLQLWSFPGAEAQVAALADDIAYDA
                     HDIDDGLRADLFRLDELAAVALPGRIIRDIRAAYPALDAARLVHEFVRRLIGLLIEDV
                     VAETGRRLAALAPHSADDVRHAPSGMSGFSPAVAEADGAIKDFLETRMYRHARVMRVM
                     DDAAQVVRELFARYSQRAGALPAEWSEGLADTDEGGRARRIADFIAGMTDRYALAEHA
                     RLFDSTPELR"
     gene            4654..4983
                     /gene="erpA"
                     /locus_tag="VNY79_06700"
     CDS             4654..4983
                     /gene="erpA"
                     /locus_tag="VNY79_06700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0016226 - iron-sulfur cluster assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster insertion protein ErpA"
                     /protein_id="HWX72170.1"
                     /translation="MTVPVTVTERAAQKIGEILGQEPVGTMLRVSVAGGGCSGFQYKF
                     DTERSRADDDVVIERSGATVLIDPVSLNYMAGAEIDFVDDLIGSAFKINNPQATASCG
                     CGTSFAL"
     gene            4988..5788
                     /gene="xth"
                     /locus_tag="VNY79_06705"
     CDS             4988..5788
                     /gene="xth"
                     /locus_tag="VNY79_06705"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008311 - double-stranded DNA 3'-5' DNA
                     exonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HWX72171.1"
                     /translation="MRIATWNVNSIKQRLDAAVAWLSERQPDIVCLQETKCVDDAFPR
                     EPFEAAGYNVAVHGQKAFNGVALLSKFPFDEVSSGLPGDHADNHARFIEAVVSTASGA
                     LRVASIYLPNGNPPETEKYSYKMAWMKRLSAYARDWLPLEEPLILAGDYNVIPAGADA
                     RNPQMWVGDALFLPRTRSEFRALINLGFTDAVRAATDEPGLYTFWDYQAGAWQKNNGI
                     RIDHMLLSPAAADRLTDVGIDRHVRTWEKPSDHVPVWLDLAIDAAAQR"
BASE COUNT          995 a         1991 c         2096 g         1045 t
ORIGIN      
        1 gctgattgtg catcggcctc gctgcgctgg gagcttacct gcaccgcgta gccgccgctg
       61 gcggtagtct ctcccgtcgt tccgccggcg ggggttgtgg tggcgacggc ggcgtgcgcg
      121 cgagaacgag acggcgccgg caccagcgcc ggcggcgtgg cggcgacatc gccctgcgag
      181 tccggcgcga gcgagagtgg ctggctgccg gtcgaggctg acgcggccgc gctgggcttc
      241 gccgccgaca tcttggcgga gcgtgccgag ttgtgctggg gcgccgaggc ggcagcgccc
      301 gcgtcggttc ctcccgactg atcggagcgg atcgtgacgg tgtgaatttt cttcggctcg
      361 gcggaagcgg gcgccggggc tggcggcgga gcggcgggga ccgtcgcgat gacaggcgga
      421 gcggcggcgg acgcggcgcc agccggtgcc ggcacgagcg gcgcggctcc gatgctcgaa
      481 gcgccggccg gaaggctgtt cggattgggt gcaatcggta tcgtcgaaat gacgcgcggt
      541 gccgttttcg acggctcctg aatttccacc ggttgctcct cacgcgagac gagcttttcg
      601 ctcgagcccg tgttcgcgac cgtcgtctgc gccgaattgc tggcgcgggc atcgccgtaa
      661 ccgggcacga tcttgttggg cccgttgccg gccttgatga tgggtggcag cgtcggcagc
      721 attgagccgc cgaacatggc gcggtaagcg aaggcgcccg ccgtcccaag caccgccaag
      781 ccgagcactg cgatcacgag gaccagaccg ccgcgccggc ggggtgttgg ggcgtcatcg
      841 tagtagtcgt cggcgccata ggcttcgcca acctcggccg cttggatctc cccggccgcg
      901 cgctctccgg gcgccggcgg cgggaaggcc ggggcttggc gaggaggcag aaccggcggc
      961 cgatcgtccg gcgtcggcaa agccggctgc gcttcatctt ggtaaccggc ggtgtcggca
     1021 accgccggaa agtcccgcgc gtcgtcttcg ctgaagccgt tgaaccgcgg cgcgagcccg
     1081 gaaaaaaatc gaccgccgga cggcggctca ttctcgtagg cgcgctcttg cggcgcctca
     1141 ccaagggacg gcaacggctc gttgcgcggg ggcgtgacgt agcgctcttc cgccgggcgc
     1201 tgctgttcgg gatcgttgtc gtccgcgccc cattcgaggc cggaggaccg tgcgtcgtca
     1261 gcccgctcgg caccgtcggt ctcgtgccgg ccgctgtcgg cgaacggatc gctcttgccg
     1321 atgagccgcg ccaattctgc gagcggatcg ccagcgctcc ggcgagcggt ctggtcggcc
     1381 ccctcccgcg cgacgggatc gcggctccgg taagagcgga aattgttgtc agccatcgta
     1441 ctcgcctcaa accaggcgtt gaaacgcacc ggcctatccc cctcgaccgc agctcccggt
     1501 ttcggtttcc cgggcggcac gaacggtgat tatcgcatct cgttcggcgc cccgacaccc
     1561 agtaacgcca gccccgaggc aagcacggat acgacgccct gtacaagtgc aaggcgagcc
     1621 acggtcattt gtcgatcatt ctggataatg aagcgtaaat gtggcgaggt attgccgagc
     1681 gtccatagcg tatgaaattc actggccaag tcgaaaagat aaaaggcgat ccggtgcggc
     1741 tcatgcgcgg ccgacgccgc ctccacgatc cgaggataga gcgcaatttg ccgcatcagg
     1801 gcgagttccg ccgggtcgga gagccgttcc agcgccgcag catcgacgac tgccggatcg
     1861 gcaaaatccg cgggcagatc ggaaaagaca gcacgggcat tacggaagac ggattgcccg
     1921 cgggcgtgtc catactggac gtagaagacg ggattgtcgc gcgattgttc gatcaccttg
     1981 gcaaggtcga agtcgagcac ggcgtcgttc ttgcggtaga gcatcatgaa gcggacggca
     2041 tcgcgcccga cctcatccac gacctcacga agcgtcacga agtcaccggc gcgcttggac
     2101 attttgaccg gctcgccggc gcgcaggagc ttcacgagtt ggatgagctt gacgtcgagt
     2161 tcggcgctct gtccgctcag tgccgccacc gccgcctgca tgcgtttgac gtagccgccg
     2221 tggtcggcgc cccagacatc gatcaacgtc ttgaagccgc ggtcgagctt cgtgcggtgg
     2281 taggcgatgt ccgaggcgaa gtaggtatag gagccgtcgg atttcttgag cggacggtcc
     2341 acatcgtcgc cgaatgcggt cgagcggaac agggtctgat cgcggtcctc ccagtcctcg
     2401 accggcgcgc ccttcggcgg cggcagtcgc ccttcataga cgtagccgcg cgcgcgcagc
     2461 cactcgatcg tctcggccac ctggtcggca ttctctcccg ccagtgagcg ctcggaatag
     2521 aagacgtcat ggttaacgcc gagtgacgcg aggtcggcgc ggaccgccgc cagcatcatc
     2581 tcgatcgccc ttacgcgcac cggcggcagc catgcggtct cgggggtggc cataagggca
     2641 ggcccatatt gcacggcgag cgcttcgccc actggtttga ggtactcgcc gggatagaga
     2701 ccctccggga tcggcccaat ggcctccccc agcgcttcgc ggtaacgcag ataggcggag
     2761 cgcgcgagct gatcgacctg cgcgccggcg tcgttgacat agtattcgcg cgtcacctcg
     2821 aagccggtga agacgagcag gttggccagc gcatcgccga acacggcgcc ccggcaatgg
     2881 ccgatgtgca tcggcccggt cggattggcc gagacgtatt cgacgttgac cggggtgccg
     2941 ccgcccactt cgctcctgcc gtagcgctgt ccaagccgca ccgcgattcg cagcgtctcg
     3001 atccaggctg ccggcttgag cgtgatgttg atgaagcctg ggccggcgac ctcaacactg
     3061 ccgatcagcg ggtcgctgcg aagtttttcc gcgatggctt gcgcgaggtc gcgcggtttc
     3121 ttgcccgcat ccttggcgag caccatggcc gcgttggtcg ccatgtcgcc atgggtcgga
     3181 tcgcgcggcg gctcaacggt gatgcgcgac cggtcgatcc cggccggcaa cacgccggcc
     3241 gcaatcagcg catcatgcgc gcgacgaacg cggtcgagca tgtcgacgta aatgttctgg
     3301 gcggccatga ttttcgcact acggcgtccg cgccggaggc gcgcgcctaa cgcaattccg
     3361 gggtcgagtc aaaaagccgc gcgtgctcgg cgagcgcata gcggtcggtc atgccggcga
     3421 tgaaatcggc gatgcggcgc gcgcggcccc cctcatcggt atcggctagg ccctcgctcc
     3481 attccgccgg cagcgcgcct gcgcgctggc tgtagcgcgc aaaaagctcg cggacgacct
     3541 gggccgcgtc atccatgacc cgcatcacgc gcgcatggcg atacatgcgc gtctccagaa
     3601 aatccttgat ggcgccgtcg gcctcggcaa cggccggcga gaagcccgac attccggaag
     3661 gtgcgtgccg cacgtcatcg gccgaatgcg gagcgagcgc ggcgagccgc cgcccggtct
     3721 cggcgacgac atcctcgatc agcaggccga tcagccggcg cacgaattcg tgcaccagcc
     3781 gcgcggcatc gagcgccgga taggcagcgc ggatgtcgcg gatgatcctg cccggcagcg
     3841 cgacggcggc gagctcgtcg aggcggaaca ggtcggcacg taaaccgtcg tcgatgtcgt
     3901 gggcgtcgta ggcgatatcg tcggccaaag cggcgacctg cgcttccgca ccggggaagc
     3961 tccagagctg caggtcctgc atctggatgt agcggaggat cgtctcggga ataccatggg
     4021 cgcgatagcg gccgagcggc gccccgtcgc gatcggtgag cggaccgttg tgcttgacca
     4081 ggccttccag ggtctcccag gtgaggttga ggccgtcgaa ggcgggataa cggcgttcca
     4141 gcgcggtcac gacgcgcagc gtctgtgcgt tgtgatcgaa gccgccaaag gcggcgagac
     4201 attcatcgag cgcgcgctcg ccggcatgac cgaacggcgg atggccgaga tcgtgcgcaa
     4261 gcgccagcgc ttcggcgagg tcttcgtcga gtcccagggc gcgggcgagc gcacgcgcga
     4321 tctgcgccac ttcaagcgtg tgggtgagcc gggtgcggta gtggtcgccc tcgtcgaata
     4381 cgaacacctg agtcttgtgc ttgaggcggc gaaaggccgt cgaatggatg atgcgatcgc
     4441 agtcgcggcg aaaggcgctg cggcctttgc tcgcgggctc cggatagagc cggccgcggc
     4501 tctgccccgg atcgcatgca cagcgcgcgc gcggcgttgc ggcttcgatc gccatcggcc
     4561 tccggggccc ctgcaattga ccttggcttt ggccgcactt aactatcatg tggatatggt
     4621 tgcaatcgcc gtgcgttgcg gctggagatg acgatgacgg tccctgtcac cgtgaccgag
     4681 cgggcggcgc agaagatcgg cgagatcctt ggccaggaac cggtcggcac gatgctgcgc
     4741 gtgagcgtcg ccggcggagg ctgttccggt ttccagtaca agttcgatac cgagcgcagc
     4801 agagccgacg atgacgtcgt gatcgagcgc agcggcgcca cggtgctgat cgatccggtt
     4861 tcgctcaact acatggccgg cgccgagatc gatttcgtcg acgatctgat cggttcggcc
     4921 ttcaagataa acaatccgca ggccaccgcg tcctgcggct gcggcacgag cttcgccctc
     4981 tagtaccgtg cgcatcgcca cctggaacgt caactcgatc aagcagcgcc ttgatgctgc
     5041 ggtcgcctgg ctctccgagc gccagcccga catcgtctgc ctgcaggaaa cgaaatgcgt
     5101 cgacgacgcc ttcccgcgcg aaccgttcga ggcggcggga tacaacgtcg ccgtccacgg
     5161 ccaaaaggcg ttcaacggcg tcgcgctgct gtcgaaattt ccgtttgacg aggtgagcag
     5221 cggcctgccc ggcgaccacg ccgacaacca tgcgcgtttc atcgaagcgg tggtctcgac
     5281 ggcgagcggg gcgctacgcg tcgcgagcat ctatcttccc aacgggaatc cgccggagac
     5341 ggaaaaatac tcctacaaga tggcgtggat gaaacggctc tcggcgtacg cccgggactg
     5401 gctgcctctg gaggagccgc tcattctcgc cggcgactac aatgtgattc cggccggcgc
     5461 cgatgcacgc aatccgcaaa tgtgggtcgg cgatgccctg ttcttgccgc gcacgcgcag
     5521 cgaattccgt gcgctcatca atctcggttt caccgacgcg gtgcgcgcgg caaccgacga
     5581 gccgggcctt tatacgttct gggactatca ggccggcgcc tggcagaaga acaacggcat
     5641 ccgcatcgac cacatgctgc tgtcgccggc ggctgccgat cggctgaccg atgttggcat
     5701 cgaccggcac gtgcgcacct gggagaagcc ttccgatcac gtgccggtgt ggcttgatct
     5761 cgccatcgac gcagcggcac agcgttagcc gcgaggcgct gcgttcttag ttcgcatcaa
     5821 aacctcgcgc accgcggcat ttttttcatc tggtcatgga acttttggcc gcgcttgccg
     5881 gcgtgcgaaa gcctcgtcgc cttgacagcc tcggcgcgcg cccgctaagt aaccagttgg
     5941 atacatagca accggatcga tcggcacagt gcggccatcg ccgttccacg gcctctccat
     6001 gtccgcgacc acgcagcggc tgccgcgatt tgccgcggcg gcggcgcaga tgggcgccgg
     6061 cgttcttgcg ccgggtgtcg aactcgtgcg gctcggccag tttgcgcagc gctccggcat
     6121 ctacctc
//
LOCUS       DATMQB010000222         2763 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2875275, whole genome shotgun sequence.
ACCESSION   DATMQB010000222 DATMQB010000000
VERSION     DATMQB010000222.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2763)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2763)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2763
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2875275"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..330)
                     /locus_tag="VNY79_06710"
     CDS             complement(<1..330)
                     /locus_tag="VNY79_06710"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72172.1"
                     /translation="MALLFVAVSIGAGFLSRESASATRTFMSPVIFHYASVLFLSLIA
                     LIPTHTAISLAAAIGVVAAVGLLYSVMILIRVIRDPVGDTADALAYGACPLVAYAAAL
                     AAAWLLLA"
     gene            complement(449..1195)
                     /locus_tag="VNY79_06715"
     CDS             complement(449..1195)
                     /locus_tag="VNY79_06715"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX72173.1"
                     /translation="MAAQKIALVTGAGSGVGRAATLALSRDGYAVVLAGRRREMLEAV
                     AKEASGKTLVVPTDVSEPDSIRALFAKTKEAFGRLDVLFNNAGIGARAAPIDEIPLDK
                     WQAVVATNFTGLFLCTQEAIKLMKSQDPRGGRIINNGSISAHAPRPGAAPYTATKHGV
                     TGLTKQTALDCRNYGICCGQIDIGNAETPMTARMAEGVPQADGRMMPEERMSADDVGR
                     AVAYMASLPLEANVLFMTVMANKMPFVGRG"
     gene            complement(1494..>2763)
                     /locus_tag="VNY79_06720"
     CDS             complement(1494..>2763)
                     /locus_tag="VNY79_06720"
                     /EC_number="2.7.7.65"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0052621 - diguanylate cyclase activity
                     [Evidence IEA];
                     GO_function: GO:0071111 - cyclic-guanylate-specific
                     phosphodiesterase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="bifunctional diguanylate
                     cyclase/phosphodiesterase"
                     /protein_id="HWX72174.1"
                     /translation="GERLESVIAEVRRGGPSAAVFYIDLDHFKDVNDTLGHHVGDALI
                     LNVTQRLSRVVRGHNLVARLGGDEFAIITSCPSDSYSLQAIAGRIISAVCAPYSINGN
                     NIIIGASIGIAVIDRRAGDAADILRYADMALYRAKNEGRNRACIYDAAMDADLSQRKL
                     LEADLLQAIRSDGLAAAYQPIVNASGAVMVGVEALARWNHPTAGEISPVDFIPIAEHS
                     GLIVELGEWMLRRACLDGKGWPDLTIAVNVSPLQFRRSDFVDTVERILNETGFDANRL
                     ELELTESTLLGNLETAELSMLRLKAIGVRFALDDFGTGYSSLLYLRRFPFDKLKIDSS
                     FVRSIETAPDAAAIVHAVVSLGRGLGMKVTAEGVENAEQHLFLRAAGVHSMQGFRFGK
                     PGPATNISARLAAPDDYRVRSPDQEVALAS"
BASE COUNT          467 a          874 c          975 g          447 t
ORIGIN      
        1 cgccagcagc agccacgccg ccgcgagcgc ggcggcgtag gcgacgagcg ggcatgcgcc
       61 gtaagcgagc gcgtccgccg tatcgcccac ggggtcgcgg atcacgcgga tgagaatcat
      121 gacggaatag aggaggccga ccgcggcgac aacgccgatg gcggctgcga gcgagatggc
      181 ggtgtgggtc ggaatgagcg cgatgaggct gagaaacagc acgctggcgt agtggaagat
      241 gaccgggctc atgaaggtgc gggtggcgct agcgctctcg cggctgagaa agccggcgcc
      301 gatcgagacc gcgacgaaca gcagcgccac cagcgcggcc gcggcggtcc cgagcaggat
      361 gtaaaattcg tgccagccat caagatgggc gcattttagt cgagcatgat ctgatccgaa
      421 gaccggacgc cacttttcgt gaccatgctc agccgcggcc gacgaacggc atcttgttgg
      481 ccatcaccgt catgaacagc acattggcct cgagcggcag gctcgccatg taggctacgg
      541 cgcggccgac atcgtcggcg ctcatgcgct cctcgggcat catgcggccg tcagcctgcg
      601 gcaccccttc ggccatgcgc gccgtcatcg gggtctcggc attgccgatg tcgatctggc
      661 cgcagcagat gccgtagttg cggcaatcga gcgcggtctg cttggtcagg ccggtgaccc
      721 catgcttggt cgccgtgtat ggcgcggcgc ccgggcgcgg cgcatgcgcg gagatcgagc
      781 cgttgttgat gatgcgcccg ccgcgcgggt cctgggactt catcagcttg atcgcctcct
      841 gggtgcacag aaacaagccg gtgaagttgg tggcgacgac cgcctgccac ttgtccagcg
      901 ggatctcgtc gatgggggcg gcgcgcgcac cgatgccggc attgttgaac agcacgtcga
      961 gccggccgaa cgcctccttg gtcttggcga acagcgcgcg gatcgaatcc ggctcgctga
     1021 cgtcggtcgg cacgacgagg gtcttgccgc tcgcctcctt ggccaccgct tccagcatct
     1081 cgcggcgccg gccggcgagc acgaccgcat aaccgtcgcg cgagagggcg agcgtggcgg
     1141 ctctgcccac tccgctgccg gctccggtca ccaaggcgat tttctgcgca gccatcgatc
     1201 ggttcctccc gtttgattgc gtgacaatac ggtcgagttc caattgttgg aaccgactgt
     1261 ggcacaatct ccttcagact tgaacacctg cggctcactc gcaccgccac cattgctctc
     1321 ctcggctgtg acatcgccgc gagcttttgc gcgcgcagcc gacggccatg gcggaacatt
     1381 gatcatcgaa gggagcaacg cggcgaaggg ccttcgctca cattaccgcg gcacgcatgg
     1441 cggcgcatcc agcgacggag gcaacggccc cgtccccgga caaaccggcg cgctcagctt
     1501 gcgagcgcaa cctcctggtc ggggctgcgg acgcggtagt cgtcgggcgc ggcgagccgc
     1561 gcgctgatgt tggttgccgg gcccggcttg ccgaagcgga agccctgcat cgagtgcacg
     1621 ccggcggcgc gcaggaacag atgctgctcg gcgttctcga cgccctcggc ggtcaccttc
     1681 atgccgagac cgcggccgag gctgaccacg gcgtgaacga tggcggcggc gtccggagcc
     1741 gtttcgatgc tgcgaacgaa gctcgaatcg atcttgagct tgtcgaacgg gaagcgccgc
     1801 agatacagca ggctcgaata tccggtgccg aaatcgtcga gcgcgaagcg cacgccgatg
     1861 gctttgaggc gcagcatgga aagctccgcc gtttccaggt tgccgagcag cgtgctctcg
     1921 gtgagctcga gctcgagccg gttggcgtcg aaaccggtct cgttgaggat gcgctcgacc
     1981 gtgtcgacga agtcggagcg gcggaactgc agcggcgaga cgttgacggc gatggtcagg
     2041 tccggccagc ccttgccgtc gaggcaggcg cgccgcagca tccactcgcc gagctcgacg
     2101 atgaggccgg agtgctcggc gatcggaatg aaatccaccg gcgagatctc gccggcggtc
     2161 ggatggttcc agcgggccag cgcctcgacg ccgaccatga ccgcgccgct ggcgttgacg
     2221 atcggctgat acgcggcggc gaggccgtcg ctgcggatcg cctgcagcag atcggcttcc
     2281 aaaagcttgc gctgggaaag gtcggcgtcc atcgccgcgt cgtagatgca ggcgcggttg
     2341 cggccttcgt tcttggcgcg gtagagcgcc atgtcggcat agcgcaggat gtcggcggca
     2401 tcgccggcgc ggcggtcgat caccgcaatg ccgatcgaag cgccgatgat gatgttgttg
     2461 ccgttgatcg aatagggcgc gcagacggcg gagatgatgc ggccggcgat cgcctgcagc
     2521 gaatacgaat cggaggggca ggaggtgatg atggcgaact cgtcgccgcc gagccgggcg
     2581 accagattgt ggccgcgcac cacgcggctc aggcgctgag tgacgttgag gatgagcgca
     2641 tcgccgacgt ggtggccgag ggtatcgttg acgtccttga agtgatcgag gtcgatgtag
     2701 aacacggccg ccgaaggccc gccgcgccgc acctccgcga tgacgctctc gagccgttcg
     2761 ccg
//
LOCUS       DATMQB010000223         5865 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1625464, whole genome shotgun sequence.
ACCESSION   DATMQB010000223 DATMQB010000000
VERSION     DATMQB010000223.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5865)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5865)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5865
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1625464"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1035
                     /locus_tag="VNY79_06725"
     CDS             <1..1035
                     /locus_tag="VNY79_06725"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX72175.1"
                     /translation="HGLSMSATTQRLPRFAAAAAQMGAGVLAPGVELVRLGQFAQRSG
                     IYLVLIALLLVPALWLPEYRNVLNLGQIVQQSAALAILAIGQTFVIACRMIDLSVGQL
                     MGLIVVASCSLMEGRPEATIPAILLALAIGLAVGAINGFLNNRLRIHSLILTLGMLSI
                     LQGAIFVYTDRSVGAASPAVLRIGNGTVMGVPVTVPLVLVVAALAALLLHRTRFGLHV
                     RVVGANEEGARRAGIDVARVKLPVFILSGVSAAIAGIILAGRLGTGYPNAGTGFELDA
                     IVAVVLGGTPLSGGRGTILGTLAAVMVLGVTANLLNLLGMSAFIQMVVKGAIVIAAVL
                     INQPRVLGRA"
     gene            1041..2021
                     /locus_tag="VNY79_06730"
     CDS             1041..2021
                     /locus_tag="VNY79_06730"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX72176.1"
                     /translation="MSPSLRRHAVRVLQRHGIWLVLLLLLLVSATLSDAFLRPAYLMN
                     LVLQQTPVGITAIGVTLVMIAGGIDLSVGAIISLTAVMCAILMNGESENLPRALILTC
                     LAGTLVGAFNGLLIAYNRVSPFILTLGTAIIVYGLTQIYSGGTASGVVSPGFREALNH
                     RIGGIVPTMVVILLLAAACGIWIQRRTRFGRALYLIGTNPTAARLAALNLPRVTLIVY
                     SLSGLFAALGGIALLARAGVSGTYTGRGSEFDVLAAAVLGGTTFEGGHGGIGGTIGGL
                     LVLGLALNLVNLVGLSFYAQLIVKGAIIVAASTTYEFVRRSSASLEKPAT"
     gene            2033..3106
                     /locus_tag="VNY79_06735"
     CDS             2033..3106
                     /locus_tag="VNY79_06735"
                     /inference="COORDINATES: protein motif:HMM:NF024799.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HWX72177.1"
                     /translation="MRKFTLLMAAAVAAMASLGWSAARAQQSDEALKATFERVAKLAQ
                     EAVDTTRFKKKPPYHIGVSAGYLSNSWILFLNQYVKYEASLHPEFADVVVTDAAFNPA
                     KQASDVEDLLSKGIDVLLFWPVDEKAMMPALEKVAAKGIPTVNIGYNFIDSPAVTSNA
                     YVDQWKQSTQVATHLAESLKDKGTIFAMLPIAGSSAAVTQLAALNDVVKSHPDIKLAS
                     VQFGDWNRAKAKQLTENMLQRFPHIDGVFSPAGQMSAGVLEAFDEAGRMGEVTMSPGD
                     EYNGWVKWIAKTDKWGSVTSGLAVGRAAVLQALAILQGEKVTRARVVTTEYLTPKDAA
                     KLYDPKRPDDWWPNSLPEKFLPK"
     gene            3126..4646
                     /locus_tag="VNY79_06740"
     CDS             3126..4646
                     /locus_tag="VNY79_06740"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HWX72178.1"
                     /translation="MPLLETRGLSKRFPGIVALDEVDFEADAGEVRAVVGANGAGKST
                     FMNILAGVFPPSSGEIRLAGQPVAFASPRDAHELGINIVFQEFSSTPELTVAENIFLG
                     REPVSRYRLIDRKRLRRDAAEILDRYHLDLSPDAMVGSLSVAQRQQVELARALSTSAR
                     ILILDEPTAVLSPRDWENLRRIIGHMIREGHLILYVSHRLDEVFAIADRITVLRNGRE
                     VATGATAAMTQRELVQLMTGREARKVGALAPPPAAADLPLLSVAVQREDGASSFQLNR
                     GEIVGLGGLVGSGRTALARSLIGLTPGMHPTMAIDGKPVHIKTPRQAFAHGIAYLTED
                     RKRDGLFSNLSVTVNCSAATLPAYSPWGLLREDIERSACGSILQQLGLVARSLDMAAE
                     ELSGGNQQKVVMARALLARPRILICDEPTRGVDVQAKMEIYELLQKLAAEGVGILLIS
                     SEFSELLSLTHRILVVRHAAISRELVTGDTSEELLLLAAAGGAEALDPGAAIGQSN"
     gene            4704..5543
                     /locus_tag="VNY79_06745"
     CDS             4704..5543
                     /locus_tag="VNY79_06745"
                     /inference="COORDINATES: protein motif:HMM:NF012993.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HWX72179.1"
                     /translation="MQGNPKVNIAVVQMDCVVGEITPNLNKIRHFAGLAANLGADIAI
                     FPECCTTGYFIGDKLSTLAEPDDGATAKELGDIARSSKLHLAVGMFTKDGNAVRNSQL
                     LFAPDGKRLATYHKAHLFASEREFCRPGDQPVVAETSLGKIGMTICYDLIFPEYLRRP
                     IEMGADFIINSTDWIHDGYQRDFWGFNGERIRGLVSTRALENGIVFAMANRVGHEVAA
                     PGVEFDSIGHSCVASPSGKILASLGAGEGVAVAKLDIADTDLNRWLSIATYRRDRRPE
                     LYR"
     gene            5575..>5865
                     /locus_tag="VNY79_06750"
     CDS             5575..>5865
                     /locus_tag="VNY79_06750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019171792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72180.1"
                     /translation="MLKNARTDRQANGGQAAPHAASVLSAQSLPDTFPSVDALEDFMT
                     TPSQALIDDLAAIDGDILVLGVGGKMGPTLAGLAKRAAPGKRVIGVARFSETD"
BASE COUNT          979 a         1931 c         1904 g         1051 t
ORIGIN      
        1 cacggcctct ccatgtccgc gaccacgcag cggctgccgc gatttgccgc ggcggcggcg
       61 cagatgggcg ccggcgttct tgcgccgggt gtcgaactcg tgcggctcgg ccagtttgcg
      121 cagcgctccg gcatctacct cgtcctgatc gcgcttctgc tggttccggc cctttggctc
      181 cccgaatatc gcaacgtgct caatctcggg cagatcgtgc agcagtccgc tgcgctggcg
      241 atcctcgcga tcggccagac tttcgtgatt gcctgccgga tgatcgactt gtcggtcggc
      301 cagctcatgg ggctgatcgt ggtggcgagc tgcagcctca tggagggccg gccggaggcg
      361 acgatccccg caatcctgct tgcgctcgcg atcggcctcg ccgtcggcgc gatcaacggc
      421 tttctcaaca atcgtctgcg catccacagc ctcatcctga cgctcggcat gctcagcatc
      481 ctgcaggggg cgatcttcgt ctataccgac cgcagcgtcg gcgcggcctc gcccgcagtg
      541 ctgcgcatcg gcaacggcac ggtgatgggt gttccggtca cggtgccgct cgtcctcgtg
      601 gtcgccgcgc tcgcggcgct gctgctgcac cggacgcgct tcggcctcca cgtccgcgtg
      661 gtcggcgcca acgaagaggg cgcgcggcgt gccggcatcg acgtcgcgcg ggtgaagctt
      721 ccggtgttca ttctatcggg agtcagcgcc gctatcgccg gcatcatcct cgcgggacgc
      781 ttgggcaccg gctatccgaa cgcggggact ggcttcgaac tcgatgccat cgtcgccgtg
      841 gtccttggcg gcacgccgct gtcaggaggc cgcggcacca tcctcggaac gctggcggcg
      901 gtgatggtgc tcggcgtcac cgccaacctt ctcaacctgc tcgggatgtc ggccttcatc
      961 cagatggtgg tgaagggcgc gatcgtgatt gccgcggttc tcatcaacca gccgcgggta
     1021 ctggggcggg catgatctcg gtgtcaccgt cgctccgtcg ccatgctgtc cgcgtgctgc
     1081 agcggcacgg catttggctc gtactgctgc tgctgctgct ggtgtcggcc acgctttcgg
     1141 acgcgttcct gcggccggcc tatctcatga acctggtgct gcagcagacg ccggtgggca
     1201 ttaccgcgat cggcgtcacg ctggtgatga tcgcgggcgg catcgatctg tcggtcggcg
     1261 ccatcatctc cctgaccgcg gtcatgtgcg ccatcctgat gaacggcgag agcgagaatt
     1321 tgccgcgggc gctgatcctg acctgcctcg ccgggacatt ggtcggcgcg ttcaacggcc
     1381 tattgatcgc ctacaaccgg gtctcgcctt tcatcctgac gctcgggacc gcaatcatcg
     1441 tctatggcct cacgcagatc tattccggcg gcaccgcgag cggcgtggtc tcgccgggct
     1501 ttcgcgaagc gctgaaccac cgcatcggcg gcatcgtgcc gacgatggtc gtgatcctgc
     1561 tgctggccgc ggcgtgcggc atctggatcc agcggcgcac gcgcttcggc cgcgcccttt
     1621 atctcatcgg caccaatcca acggcggcgc ggctcgccgc gctcaatctg ccacgggtga
     1681 cgctgatcgt ctattcgctg tcgggcctgt tcgcagcgct cggcggaatc gcgctgctcg
     1741 cgcgcgcggg tgtttccggc acatataccg gacgcggctc ggagttcgac gttctcgccg
     1801 ccgcagtgct cggcggcacg accttcgaag gcggccatgg cggcatcggc ggcaccatcg
     1861 gcggcctgct cgtcctcggc ttggcgctca atctggtcaa tctggtcggt ttgagcttct
     1921 acgcgcagct gatcgtcaag ggcgcgatca tcgtcgctgc atcgaccacc tacgaatttg
     1981 tcaggcgttc gtcggcttcg cttgagaagc cggcgacttg aaggagggag aaatgagaaa
     2041 attcacgctt ctcatggcgg ccgcggtggc cgccatggcc tcgctgggct ggagcgccgc
     2101 acgcgcgcag caatccgacg aggcgctcaa ggccacgttc gaacgcgtgg ccaagcttgc
     2161 gcaggaggct gtggacacca cgcgcttcaa gaagaagccg ccgtatcaca ttggtgtctc
     2221 cgccggctat ctgtccaatt cctggattct gttcctgaac cagtacgtca agtacgaggc
     2281 ttcgctgcat ccggagttcg ccgacgtcgt ggtcacggat gcggcgttca atcccgccaa
     2341 gcaggcctcc gatgtcgagg acctgttgag caaagggatc gacgtcctgc tgttctggcc
     2401 ggtcgacgag aaggcgatga tgccggcgct ggaaaaggtg gccgccaaag gcatcccgac
     2461 ggtcaacatc ggctacaact tcatcgacag tccggcggtg accagcaatg cctacgtcga
     2521 tcaatggaag caaagcaccc aggtggcaac gcacctcgcc gaaagcctga aggacaaagg
     2581 caccatcttc gccatgctgc cgatcgccgg ttcctcggcg gcggtgacgc aactcgcggc
     2641 gctcaatgat gtcgtcaaga gccaccccga catcaagctt gccagcgtcc aattcggcga
     2701 ctggaatcgc gccaaggcca agcagctcac agaaaacatg ctgcagcgct tcccgcacat
     2761 cgacggcgtg ttctcgccgg cggggcagat gtcggcaggc gtgctcgaag cgttcgacga
     2821 ggccggccgc atgggcgagg tgacgatgtc gcccggcgac gaatacaacg gctgggtgaa
     2881 gtggatcgcc aagaccgaca agtggggcag cgtgaccagc ggcctcgcgg tcggccgcgc
     2941 cgccgtgctc caggcgctgg ccattcttca aggcgagaag gtgaccaggg cgcgcgtggt
     3001 gacgacggaa tatctgacgc ccaaggacgc cgcgaagctc tatgacccca agcggcccga
     3061 cgattggtgg ccgaactcgc ttcctgagaa attcctgccg aagtgagctt gcggcggagc
     3121 gtcctatgcc gctcctggag acgcggggac tgtcaaagcg cttccccggc atcgttgctc
     3181 tcgatgaggt cgacttcgag gccgacgccg gggaggtccg ggcggttgtc ggcgccaacg
     3241 gcgccggcaa atccacgttc atgaacatcc tggcgggcgt gtttccccca agctcgggag
     3301 agatacgcct cgccggccaa ccggtggcgt tcgcgtcgcc gcgcgacgca cacgaacttg
     3361 gcatcaacat cgtgttccag gaattcagtt cgacgcccga actgacggtg gcggaaaata
     3421 tcttcctcgg gcgcgagccg gtctcacgct accgcctgat cgaccgcaag aggctgcgcc
     3481 gcgacgccgc cgaaatcctc gaccgctatc acctcgacct ttcacccgac gccatggtcg
     3541 gctcgctgag cgtcgcacag cgccagcagg tcgagcttgc ccgcgcgctc tccacctcgg
     3601 cacggatact gattcttgat gagccgaccg cggtgctgtc gccacgcgat tgggaaaacc
     3661 tgcggcgcat catcggtcac atgattcgcg aaggccatct catcctctat gtgtcgcaca
     3721 gactggacga ggtgtttgcg atcgccgacc gcatcaccgt gcttcgtaac gggcgggagg
     3781 tggcgaccgg cgccacggca gcgatgacgc aacgcgagtt ggtccagttg atgaccggcc
     3841 gcgaggcccg caaggtcggc gcgttggcgc cgccgccggc ggccgccgac ctgccgttgc
     3901 tgagcgtcgc ggtccagcgc gaggacgggg cgagcagttt ccagctcaac cgcggcgaga
     3961 tcgtcggcct gggcgggctg gtcggatcgg gacgcacagc attggcccgc tcgttgatcg
     4021 ggctgacccc aggcatgcac cccacgatgg cgatcgacgg gaagcccgtt cacatcaaga
     4081 cgccgcgcca ggctttcgct cacggcatcg cctatctgac cgaggaccgc aagcgcgacg
     4141 gcctgttctc gaacctgtcg gtgacggtca actgctccgc tgcgactttg cccgcctact
     4201 cgccctgggg actcctgcgc gaggacattg agcgctcagc gtgcgggtcg atcctgcagc
     4261 agctgggact ggtcgcacgc tccctcgaca tggccgcgga ggagctgagc ggcggcaatc
     4321 agcagaaggt ggtgatggcg cgggcgctgc tggcgcggcc gcgcattctc atctgcgacg
     4381 agccgacccg cggggtggac gtgcaggcca agatggaaat ctacgagctc ctgcagaagc
     4441 tcgcggcgga aggagtcggc atccttctca tttcctcgga attttccgaa ctgctgtccc
     4501 ttacccaccg tattctcgtc gttcgccacg ccgcgatctc gcgcgagctt gtcactggag
     4561 acaccagcga ggagcttctc ctgttggcgg ccgcgggcgg cgccgaagcg cttgacccag
     4621 gagcggcgat cgggcaaagt aactgaatgg ttacttatcg gcgatccgcg ccggcgcggc
     4681 cgccgaagat cggagcagtt gcgatgcagg gaaatccgaa ggtcaacatc gcggtcgtgc
     4741 aaatggattg cgtggttggc gagatcacgc ccaacctcaa caagatccgg catttcgccg
     4801 gtctcgccgc caacctcggc gccgacatcg cgatcttccc ggaatgctgc acgaccggct
     4861 acttcatcgg cgacaagctg agcacgctcg ccgagcccga cgacggcgcc acggcgaagg
     4921 agctcgggga catcgcccgc agcagcaagc ttcatctcgc cgtcggcatg ttcaccaagg
     4981 acggcaacgc ggtccgcaac tctcagcttc tctttgcccc cgacggaaag cgactggcga
     5041 cctaccacaa ggcccatctg ttcgcgagcg aacgcgaatt ctgccggccg ggcgatcagc
     5101 ctgtggttgc cgaaacgagc ctcggcaaga tcggcatgac catctgctat gatctgatat
     5161 ttcccgaata tctgcggcgg ccgatcgaga tgggggcgga tttcatcatc aacagcaccg
     5221 actggattca cgacggatat cagcgcgact tctggggatt caacggcgag cgcatcaggg
     5281 ggctggtgtc cacgcgggcg ctcgagaacg gcatcgtctt cgcgatggct aatcgcgtcg
     5341 gccacgaggt ggcagctccg ggcgtcgagt tcgacagcat cggtcactcc tgcgtcgcct
     5401 cgccctccgg caaaatcctg gcgtctttgg gggcaggtga aggcgtcgcg gtcgccaagc
     5461 tcgacatcgc cgatactgat ctaaaccgct ggctcagcat tgccacctac cggcgcgatc
     5521 gccggcccga actctatcgc tgaaacgctg atcgccgcgg ggaggaaacg gccgatgctg
     5581 aagaatgccc ggacggaccg acaagccaat ggcgggcagg cggcgccgca tgcggcgagc
     5641 gtcctgtcgg cgcaaagcct gcccgataca ttcccgagcg tagacgcgct ggaagatttt
     5701 atgaccacgc cgtcgcaggc gctgatcgac gatctcgctg cgatcgatgg cgacattctc
     5761 gtcctaggcg tcggcggcaa gatggggccg acgctcgcgg ggctcgccaa gcgggcggct
     5821 cccggcaagc gcgtgatcgg cgtcgcccgc ttcagcgaga ccgat
//
LOCUS       DATMQB010000224        10852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3492123, whole genome shotgun sequence.
ACCESSION   DATMQB010000224 DATMQB010000000
VERSION     DATMQB010000224.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10852
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3492123"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..948)
                     /locus_tag="VNY79_06755"
     CDS             complement(61..948)
                     /locus_tag="VNY79_06755"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YicC/YloC family endoribonuclease"
                     /protein_id="HWX72181.1"
                     /translation="MALSSMTGFARGHGTCGPYAWAWEVKSVNGKGLDLRLRLPPGWD
                     AIEAPVRARAAESLARGSVQANLTVERSGALPVVRVNTAVLEAVLATAQALAPRIEAA
                     PPSLDGLLALKGVMEVGEAEEREEERRAAETAAIEGFAGVIAALTEMRGREGMALGRV
                     LAARLGEIAALAQRAELAPGRRPEAIRIRLAEQVAALLSQSERFDADRLHQEAILIAV
                     KADVREELDRLAAHVAQAELLIGQGGPIGRRLDFLAQELNREANTLCAKASDVELTNI
                     GLELKAAVEQFREQVQNVE"
     gene            complement(1068..2270)
                     /gene="mltG"
                     /locus_tag="VNY79_06760"
     CDS             complement(1068..2270)
                     /gene="mltG"
                     /locus_tag="VNY79_06760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008932 - lytic endotransglycosylase
                     activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HWX72182.1"
                     /translation="MNEPDARPTNAKNSALITPRSPRTALEPDPVAMPAKPSKRVRHP
                     FVIIGNAIISIFVLAALMGGVVLVSGKQRFDVPGPLAEDRVVNIPRGSGIREIADVLL
                     REGVIDQPWVFVGGVLVLKAREDLKAGEYQFKAHASLREVVATIVEGRVVTHQLTVPE
                     GLTSEQIVARLGDGDILTGNIKEIPREGTLLPDTYNFTRGTTREQVIQRMQQSQQRAL
                     KEIWDRRSPDLPIKTPEQLVILASLVEKETAKPEERTRVAAVFVNRLKQKMRLQSDPT
                     IIYGLVGGKGTLGRPIMKSEIEQPTPYNTYQIDGLPPGPIANPGRASLEAAASPARTR
                     ELYFVADGTGGHAFAESYEQHQKNVSRLRLLEAEHKEQPPADPQSTASQPPASAPSAP
                     ASQRRRRN"
     gene            complement(2883..4148)
                     /gene="fabF"
                     /locus_tag="VNY79_06765"
     CDS             complement(2883..4148)
                     /gene="fabF"
                     /locus_tag="VNY79_06765"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HWX72183.1"
                     /translation="MRRVVVTGLGMMTPLACGVEATWQRLLAGESGIRRIAKFEVSDL
                     PCRIAGEIPRGDGSNGTFNADDWMEPKEQRKVDDFILYAMGAAKQALDDADWHPREYE
                     DQVVSGVLIGSGIGGIEGIAETAVQLKERGPRRISPFFIPGRIINLASGYVSIAHSLK
                     GPNHAVVSACSTGAHAIGDAGRLVALGDADVMVAGGTESPVSRISLAGFAACRALSTG
                     FNETPERASRPYDRARDGFVMGEGAGTVVLEEYEHAKRRGARIYGELVGYGLSGDAYH
                     ITAPAEDGDGALRCMKAALRRADMSPADIDYINAHGTSTPLGDEVELRAVERLVGNSA
                     SQIAMSSTKSSIGHLLGAAGAVEAIFCLLALRDQVAPPTINLDNPSVVTPIDLVPHKA
                     SSRSINVALSNSFGFGGTNASLVFRRLQE"
     gene            complement(4279..4518)
                     /locus_tag="VNY79_06770"
     CDS             complement(4279..4518)
                     /locus_tag="VNY79_06770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HWX72184.1"
                     /translation="MSDIGERVKKIVVEHLGVEPDKVTEAASFIDDLGADSLDTVELV
                     MAFEEEFGCEIPDDAAETILTVGDAIKFLEKNAKS"
     gene            complement(4727..5464)
                     /gene="fabG"
                     /locus_tag="VNY79_06775"
     CDS             complement(4727..5464)
                     /gene="fabG"
                     /locus_tag="VNY79_06775"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006610958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004316 - 3-oxoacyl-[acyl-carrier-protein]
                     reductase (NADPH) activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HWX72185.1"
                     /translation="MFELTGKNALITGATGPIGTSIARVLHAQGAAVAISGTRREVLD
                     RLAADLGGRVHVLPCNLADSADTDALVPRVEEAMGQLDVLVANAGVTKDNLFVQLRDE
                     DWEQVIAINLSATFRLARAAVRGMMRRRFGRVIAITSVVGSTGNPGQANYVAAKAGIT
                     GMIKAIAQEYAKRGVTANCVAPGFIVTPMTDKLNDKQRETIMAKIPASRAGTVEEVAA
                     AVAFLASNEAAYVTGQTLHVNGGMAMI"
     gene            complement(5490..6434)
                     /gene="fabD"
                     /locus_tag="VNY79_06780"
     CDS             complement(5490..6434)
                     /gene="fabD"
                     /locus_tag="VNY79_06780"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004314 - [acyl-carrier-protein]
                     S-malonyltransferase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HWX72186.1"
                     /translation="MAAAFVFPGQGSQAVGMGRALADAFAPARRVFEEVDAALGERLS
                     NTIWNGPAETLTLTENAQPALMAVSLAVLRVLETEAGVDLGRDAAFVAGHSLGEYSAL
                     AAAEAITVAEAARLLRIRGRAMQTAVPVGVGAMAALIGVEFSEAEAIAAEAAGAGVCS
                     AANDNGAGQVVLSGEKSAVEQAVEIAKDRGVKRAMMLPVSAPFHCSLLQPAADAMAEA
                     LATVAVKPPRVPVVANVLAQPISEPAMIVRCLVEQVTGTVRWRESVQFMVQAGVTAFY
                     EAGAGKVLAGLIKRIAETANVSSIGTPEDIARFKATRG"
     gene            7026..7520
                     /gene="rpsF"
                     /locus_tag="VNY79_06785"
     CDS             7026..7520
                     /gene="rpsF"
                     /locus_tag="VNY79_06785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007592015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HWX72187.1"
                     /translation="MPLYEHVYLARQDASAQQVEELTAHLKGVVEGLGGKVAKTEYWG
                     VKSLSYRLRKNRKAHFTLMNLDAPSAAINEVERLERLNEDVLRYLTIRVAEHEEGPSA
                     MMRRAERDRDRDERRGDRGDRNDRGDRGDRGDRGERGDRPRDRERRPREGAEELETTT
                     TTEE"
     gene            7523..7774
                     /gene="rpsR"
                     /locus_tag="VNY79_06790"
     CDS             7523..7774
                     /gene="rpsR"
                     /locus_tag="VNY79_06790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HWX72188.1"
                     /translation="MAMSPQSGGGRRPFFRRRKSCPFSGGNAPKIDYKDVKLLQRFVS
                     ERGKIVPSRITAVSAKRQRELAQAIKRARFLGMLPYVIR"
     gene            7831..8457
                     /gene="rplI"
                     /locus_tag="VNY79_06795"
     CDS             7831..8457
                     /gene="rplI"
                     /locus_tag="VNY79_06795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HWX72189.1"
                     /translation="MEVILLERVPRLGQMGEVVRVKDGFARNFLLPRGKALRATEESR
                     TRFEAMKSELAARSLALKGEAAQVAATIDGKSFTVLRQASEAGQLFGSVSPRDLVGLL
                     GAAGFNVSRNQIALNTPIKTIGKHRVPLSLHPEIESSISIIVARNNDEAGRIERGEDV
                     TRMREEPTEQEAAALAAEAFFEPEAAQPQRAGEDAEPTAESTAPADKG"
     gene            complement(8473..9087)
                     /locus_tag="VNY79_06800"
     CDS             complement(8473..9087)
                     /locus_tag="VNY79_06800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72190.1"
                     /translation="MTRRLAAAIGLVAGLGPAMAHAQTNIDQGKTPAQIFANDCAACH
                     KPTRALANGKNRFALTEFLREHYTTSREQAAGLAAYVLGAGFGAKPANEPPKSAKAEE
                     ETSAAAKQQKPTEEAAKPEEEPAAAEDPNSNPPGRRPAAGRNDRRQANTTATRDRRRG
                     AEPVREDPAGGETPLAEPASTSAAGQAVAEPGEPAAVPRDDIPD"
     gene            9344..10588
                     /locus_tag="VNY79_06805"
     CDS             9344..10588
                     /locus_tag="VNY79_06805"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclopropane-fatty-acyl-phospholipid synthase
                     family protein"
                     /protein_id="HWX72191.1"
                     /translation="MDRLLSIFLSRFIRQGSLDVTTAAGNVYTFGDGSGAPVSVRLAN
                     ATAQRAVLLDPELRLGEAYMDGSLVVERGSIADLLEILFRQERIAAPTWALPPRAIRH
                     SFRRVQQFNPRSRSRRNVAHHYDLDGRLYQLFLDADQQYSCAYFESERQSLDDAQLAK
                     RRHLAAKLRVAPGATVLDIGCGWGGLALYLAETAKARVTGITLSKEQHARATERALER
                     GQAQQASFRLEDYRDVGGRFDRIVSVGMFEHVGVVHYRTFLDTVARSLKPDGVALLHA
                     IGRSDGPGFTNPWIAKYIFPGGYCPALSEVIPPIEKSGLVATDIEVLRLHYAETLRNW
                     RRRFAANRDTIASLYDERFCRMFEFYLCGSEIAFRREGHMVFQVQLAHDQSAVPLTRD
                     YITEFDAVSVDRRRSNVMSQGN"
BASE COUNT         1753 a         3664 c         3630 g         1805 t
ORIGIN      
        1 gacgagcatg aggccgcggc gggcaatctt ccttcgattt cgggccaagc gagccatgcc
       61 ctattccacg ttctgcacct gctcgcggaa ctgctcgacc gcggccttga gctccaagcc
      121 gatattggtg agctcgacgt cactcgcctt ggcgcacaga gtgttggctt cgcggttgag
      181 ctcctgcgcg agaaaatcga ggcggcggcc gatcggaccg ccctgcccaa tcagaagctc
      241 cgcctgcgct acatgcgccg ccagccgatc aagctcctcg cgcacgtcgg ccttgaccgc
      301 gatcaggatc gcttcctgat gcagccggtc cgcatcgaag cgctcggact gcgacaggag
      361 cgccgcgacc tgctcggcga ggcgtatccg gatcgcctca gggcgccggc cgggcgcgag
      421 ctcggcgcgc tgcgccagcg cggcaatttc gccgagccgc gccgccaaga cccgtccgag
      481 cgccatgcct tcgcggccgc gcatctccgt gagcgcggcg atgaccccgg cgaagccctc
      541 gatcgccgcc gtctcggcgg cgcgacgctc ctcctcacgt tcctcggcct cgccgacctc
      601 cattacgcct ttgagcgcga gcaggccgtc gagcgagggc ggcgcggctt cgatgcgcgg
      661 cgcaagcgcc tgcgccgtcg ccaggactgc ctcgagcact gccgtattga cgcgcacgac
      721 cggcagcgcg ccgctccgct ccacggtcag gttcgcttga accgacccgc gcgccaggct
      781 ttccgcagcg cgggcacgta ccggcgcctc gatcgcgtcc caaccgggcg gcaggcgcag
      841 tcgcagatcg agccccttgc cgttgactga tttgacctcc caggcccagg cataggggcc
      901 gcatgtgcca tggccgcgag caaatccggt catgctcgac agcgccatgg aacgccggtc
      961 tccgcggcaa aaagcaaaaa atcgcgtcga ccttagcggt ggcttttcat cgtcacaagg
     1021 ccgggcatga aagctgattg cgatcgtctc aggcttgccg acgcggtcta attgcggcgg
     1081 cggcgttgcg acgctggagc ggacggcgcc gatgccggcg gctgcgatgc ggtcgactgg
     1141 gggtcagcgg gaggctgctc cttgtgctcg gcttcaagaa gccgcagccg cgagacgttc
     1201 ttctggtgct gctcgtagct ttcggcgaac gcatggccgc cggtgccgtc ggcgacgaaa
     1261 tagagctcgc gcgtgcgcgc cggactggct gcggcctcga gcgaagcgcg gcccgggttg
     1321 gcgatcggcc ccggcggcaa gccgtcgatc tggtaggtat tgtacggcgt cggctgctcg
     1381 atctcgctct tcatgatcgg ccggccgagc gtgcccttgc cgccgaccag accgtagatg
     1441 atggtcgggt cggattgcag tcgcatcttc tgcttaagcc gattgacgaa caccgcggcg
     1501 acgcgcgtgc gctcctccgg cttggcggtc tccttctcga ccagggacgc aaggatgacg
     1561 agctgctccg gcgtcttgat cggcaggtcg ggggaccggc gatcccagat ttccttgagc
     1621 gcgcgttgct gcgactgctg catgcgctgg atcacctgtt cgcgggtcgt cccgcgggtg
     1681 aaattgtagg tgtcgggaag cagcgtcccc tcgcggggaa tctccttgat gttgccggtc
     1741 aggatgtcgc cgtcgccgag ccgggcgacg atctgttcgg aggtcaaccc ttccgggacg
     1801 gtgagctggt gcgtcaccac gcggccttcg acgatggtgg cgaccacttc gcgcaggctg
     1861 gcatgcgcct tgaactgata ttcgccggcc ttgaggtcct cgcgcgcctt gagcacgagc
     1921 acgccgccga caaacaccca cggctggtcg atgacacctt cgcgcagcag cacgtcggca
     1981 atctcgcgga tgccggaacc gcgcgggatg ttgacgacgc gatcctcagc caaggggccc
     2041 ggcacatcga accgctgctt gccggacacg agcaccacgc cgcccatcag cgccgccagc
     2101 acgaagatgc tgatgatcgc attgccgatg atgacaaagg ggtgccgcac acgcttggag
     2161 ggtttggctg gcatcgcgac tgggtcaggc tcgagcgcgg tccgcggact gcgcggggtg
     2221 atgagcgcgg aattcttcgc gttcgtcggc cgggcgtcgg gctcgttcaa cagccgctcc
     2281 gagagagatg gataagtgtc ggccgggggc aggcggcgcc gcgccggcgg gtcggccgga
     2341 ccccgcgccc ggatgttcga ggacgcaacg ggcacgccgc cattcccgtt cttcggacgg
     2401 accgctgcgc cgttggacgg cttctcgttg ctcgtcgtca gactgcgctg ttgtcgcggg
     2461 ccagccgcgg ctcgctcggg cttggccgcg cccgttgtgg cgacgcgcgt ccgtgtcggc
     2521 tccggcgtgg cggcaggagg cttcgccggt ttgggcgtag gagcgggcgg cggttccggc
     2581 ggttcagcgg caggcgttgc gctacgtgcc ttcgcctccg ccttgttggc ggcgcgcgac
     2641 ggtgcgccgc gcagacgcgc ggcagcgcgc tccttgcccc tgggtggcgg gtcggatcca
     2701 gtcaccgccg cgtatccact ctggcactat gcatgatcgg cgatgtaggc gagcccccat
     2761 ccagcgggcg aaatgctcgc cggttctccc gcattgcccg ttcggtagcg caacaggcaa
     2821 cccgccatac tgcgtcgcag gcgagtgcgg agcaaatatg gcaaaacagt gaatcggccg
     2881 cactattcct gcaatcgccg gaaaacgagc gaagcattgg tgccgccgaa gccgaaggag
     2941 ttcgacagcg ccacgttgat cgagcggctg ctcgccttgt gcggcacgag atcgatgggc
     3001 gtcaccacgg aggggttgtc gagattgatg gtcggcggcg ccacctgatc gcggagcgcc
     3061 aagaggcaga agatcgcctc cacggcgccc gccgcgccga gcaggtggcc gatcgaggat
     3121 ttcgtcgacg acatggcgat ctggctggcc gaattgccga ccagccgctc caccgccctg
     3181 agctcgactt cgtctccgag cggagtcgaa gtgccatgag cgttgatgta gtcgatatcc
     3241 gccggcgaca tgtcggcccg gcgcagcgca gctttcatgc agcgcagcgc gccgtcgcca
     3301 tcctcggccg gcgcggtgat gtggtaggcg tcgccggata ggccgtagcc gacgagttcg
     3361 ccgtagatgc gggcgccacg ccgcttcgcg tgttcatact cttcgagaac gaccgtgccc
     3421 gcgccttcgc ccatgacaaa tccgtcgcgg gcgcggtcgt aaggccgcga ggcgcgctcg
     3481 ggcgtttcgt tgaatccggt tgagagcgcg cggcaagcgg cgaagccggc gagcgagatg
     3541 cggctcaccg gagattcagt gccgcccgcg accatcacgt cggcgtcccc gagcgcgacc
     3601 agcctgccgg cgtcgccgat ggcgtgagcg ccggtcgaac aggcgctgac gaccgcgtga
     3661 ttgggcccct tcagggaatg ggcaatcgac acatagccgg aagcgaggtt gatgatgcgg
     3721 ccgggaatga agaacggcga tatccggcgc gggccccgct ctttcaattg gaccgcagtt
     3781 tccgcgatgc cttcgatgcc gccgatgccg gaaccgatga gtacgccgct cacgacctga
     3841 tcctcgtact cgcgcggatg ccagtcagcg tcgtcgagcg cctgtttcgc ggcgcccatc
     3901 gcgtagagga tgaagtcgtc gaccttgcgc tgttccttcg gctccatcca atcgtcggcg
     3961 ttgaatgtgc cattggagcc gtcgccgcgc ggaatctcac cggcgatgcg gcagggaaga
     4021 tcggagacct cgaatttcgc gatgcgcctg atgccgctct cgccggcgag cagccgctgc
     4081 caggtggcct cgacgccgca ggcaagcggc gtcatcatgc caagacccgt gaccaccaca
     4141 cgtcgcatca tcggcgctcc cggcaccgtc gcatccaaca acacccccgc aaagcccacc
     4201 gatcaaactc cgcccgcctc cggcggcgcg cggacgtcac tgccgcgcgc ggcatcgcga
     4261 ggcaggccgg gaatgccgtc agctcttcgc gttcttttcg aggaacttga tggcgtcgcc
     4321 cacggtgaga atggtttcgg ccgcgtcgtc gggtatctcg caaccaaatt cttcctcaaa
     4381 ggccatgacg agctcgaccg tatcgaggct gtcggcgccg agatcgtcga tgaagctggc
     4441 ggcctccgtc accttgtcgg gctcgacgcc gagatgctcc acgacgattt tcttcacccg
     4501 ctcgccgata tcactcatcg ttccaacctc atctttcaac gcgacccagg tcaaaaattc
     4561 ggtcccgtcg tggtgggcga cggccgcggg tcgacaccga tcagaggcgg acgctcactc
     4621 cccgcgctcc ggcgttccgg tccccagccc agtcgcggtt cggttaccac acttcccccg
     4681 cgttgaccag cacagccgcg ggtgatcggt ataggcccta tcgccttcaa atcattgcca
     4741 tcccgccatt cacatgcaag gtctggccgg tcacataggc ggcctcattg gaggcgagaa
     4801 aggcgaccgc ggcggccacc tcttccacgg tgccggcgcg gctcgccgga atcttcgcca
     4861 tgatcgtctc gcgctgcttg tcgttgagct tgtcggtcat cggcgtgacg atgaagccgg
     4921 gcgccacgca attggcggtg accccgcgct ttgcatattc ctgcgcgatc gccttgatca
     4981 tgccggtaat tccggccttg gcggcaacgt agttggcctg tccgggattg ccggtgctgc
     5041 cgaccaccga ggtgatggcg atgacgcggc cgaagcggcg gcgcatcatg ccgcggacgg
     5101 cggcacgcgc gaggcggaac gtcgccgaca gattgatggc gatcacctgc tcccagtcct
     5161 cgtcgcgcaa ttgcacgaac agattgtcct tcgtcacccc ggcgttggcg acgagtacgt
     5221 cgagctgacc catcgcttcc tcgacgcgcg gcaccagcgc gtcggtatcg gcgctgtcgg
     5281 cgagattgca gggcaggacg tggacacggc cgccgaggtc ggcggccagg cggtcgagga
     5341 cttcgcgccg cgtgccggag atggcgaccg ccgcaccctg ggcatggagg acgcgggcga
     5401 tgctggtgcc gatcggtccg gtggccccgg tgatcagcgc attcttgcca gtgagttcga
     5461 acatgacatc ctcccgctcg cctgccagct cagccgcgtg tggccttgaa ccgggcgatg
     5521 tcctcgggcg taccgatcga ggacacgttg gccgtttcgg cgatccgctt gatcagtccg
     5581 gcgagcacct tgccggcgcc ggcctcgtaa aaggccgtga cgcctgcctg caccatgaac
     5641 tggaccgatt cacgccagcg aacggtgccg gtcacctgct cgaccaggca acgcacgatc
     5701 attgccggtt cgctgatcgg ctgcgccagg acgttcgcga cgaccggcac gcgcggcggc
     5761 ttgacagcga ccgtcgcgag cgcctcggcc atcgcgtcgg cggccggctg cagcagcgag
     5821 caatgaaacg gagcggacac cggcagcatc atcgcccgct tgacgccacg gtccttggca
     5881 atctcgacgg cctgctccac tgccgacttc tcgcccgaca ggacgacctg tccggcgccg
     5941 ttgtcattcg ccgctgagca gacccctgcg ccggctgcct cggcggcgat cgcctcggct
     6001 tcactgaatt caacaccgat gagcgccgcc atcgccccga ccccgaccgg taccgccgtc
     6061 tgcatggcgc ggccgcggat gcgcaaaagc cgggcggcct cggcaacggt gatcgcctcc
     6121 gcggcggcga gagccgaata ttcgccgagc gagtggccgg caacgaaggc tgcatcgcgc
     6181 ccgagatcga cgccggcctc ggtctcgagc acgcgcagga cggcgagcga taccgccatc
     6241 agcgcgggct gcgcgttttc ggtgagggtg agcgtttccg ccggcccgtt ccagatcgtg
     6301 ttgctgagcc gttccccgag cgccgcgtcg acctcctcga acacgcggcg cgcgggagca
     6361 aacgcgtcgg caagtgcccg gcccatgccg acagcctgac tgccctgccc gggaaatacg
     6421 aatgccgccg ccatttgccg cttgcccctt gcaagagggc gagagatacc gcgggcgcgg
     6481 cagtgtcaag aaggccggga gccggtgagg aactaacaac tggaaccggc ggcacgctga
     6541 cggtgagcga cggccgccat gacgcaagca tcgcatttct gggcaactac atggccggca
     6601 ccttcgtcac cacggctcga cgatcacggc ggcaccgtgc cgacggagac accgccgcag
     6661 ggggccagca aacaacgaca cctgacgcac ccgcacgctt aggcgtgtcg gcaacgcccg
     6721 cgcctcgcag cggtcgacga caatggcgcc cggcgagccg tgcgcttgcg tttccctgcg
     6781 gtccgcgtat atagcgcgct tccgctcgac cccggccggg ggctgaaaga acggctgcgc
     6841 ccgtacgcat gttcctggaa aaccggttat cggctttccg accgaacgtg cggcgatcgt
     6901 ctggcgcggc aggaccgcag ggtccggcgt ccggtgtccc cgccttcaga gcattcgagc
     6961 ctttcccgaa gggctcgagg ggcttggcgc cggggcgagc gaggcaacgc aggaaggggc
     7021 agcccatgcc gctctacgaa cacgtctacc ttgcgcgcca agacgcaagc gcgcagcagg
     7081 tcgaggaatt gaccgcgcac ctgaaaggtg tcgtcgaagg tctcggcgga aaggtggcca
     7141 agaccgaata ttggggagtg aaatccctct cctatcgatt gcgcaagaac cgcaaggcgc
     7201 atttcacgct gatgaatctc gatgcgccgt cggcggcgat caacgaggtc gagcggttag
     7261 agcgcctcaa cgaggacgtg ctgcgctacc tcaccatccg cgtcgccgag cacgaggaag
     7321 gcccgtcggc gatgatgcgc cgggcggagc gcgaccgcga ccgcgacgaa cgccgtggcg
     7381 accgcgggga ccgaaacgac cgcggcgacc ggggtgatcg cggggaccgg ggcgagcgcg
     7441 gcgatcgccc gcgcgaccgc gagcggcgtc cgcgcgaggg cgcggaagaa cttgaaacca
     7501 cgacgacgac ggaggaatga cgatggccat gtcaccgcaa agcggaggcg ggcggcgtcc
     7561 tttcttccgc cgccgcaaga gctgcccgtt ctcggggggc aatgcgccta agatcgacta
     7621 caaggacgtc aagttgctgc agcggttcgt gtccgaacgc ggcaagatcg tgccgagccg
     7681 catcacggcg gtttcggcga agaggcagcg cgaacttgct caagcgatca agcgcgcgcg
     7741 cttcctgggg atgctgccct atgtgatccg ttaaggcgac ggtggcgcgc attgatcacg
     7801 cagccgacgc ggccgctaag gagaaccgag atggaagtga tcttgctgga gcgggtcccg
     7861 aggctgggcc agatgggcga agtcgtccgc gtcaaggacg gcttcgcgcg caatttcctg
     7921 ctgccgcgcg gcaaggcgct gcgcgccacc gaggagagcc gtacccgctt tgaagccatg
     7981 aagagcgaac tcgctgcacg ctcgctcgcg cttaagggcg aggctgcgca agtcgccgcc
     8041 acgatcgacg gcaagagctt tacggttctc cgtcaggcct cggaggcggg tcagctgttc
     8101 ggctcggtgt cgccgcgcga cctggtcggc ctgctcggcg cggccggctt caacgtgagc
     8161 cgcaatcaga tcgccctcaa tacgccgatc aagacgatcg gcaagcaccg cgtgccgctg
     8221 tccttgcacc cggagatcga gagttcgatc agcatcatcg ttgcccgcaa caacgacgag
     8281 gcggggcgta tcgagcgcgg cgaggatgtg acgcggatgc gggaagagcc gacggaacaa
     8341 gaagccgcgg cgctggcggc ggaggccttc ttcgagcccg aggcggcaca gccgcagcgc
     8401 gctggagaag acgccgagcc gaccgccgag agtaccgctc cagccgacaa gggctgatcg
     8461 ccgagcctat cctcagtcgg gaatatcgtc gcgcgggacc gccgcgggtt cgcccggttc
     8521 ggcgaccgct tggccggctg cgctcgtcga agccggctcc gcgagcgggg tctcgccccc
     8581 tgcagggtcc tcgcgcactg gttcggcccc ccggcggcga tctcgcgtgg cggttgtatt
     8641 agcctgccgg cggtcgtttc ggccggccgc cggccggcgt cccggcgggt tggagttcgg
     8701 gtcctctgcg gcggccggct cttcctcggg ttttgccgct tcctcggtcg gcttttgctg
     8761 cttggcggcg gccgacgtct cttcctcggc ctttgccgat ttcgggggct cgttagccgg
     8821 cttcgctccg aacccggcgc cgagcacgta ggcagcaagt cccgccgcct gctcgcggct
     8881 cgtcgtatag tgctcgcgta gaaactccgt cagcgcgaag cgattcttgc cgttcgccag
     8941 ggcacgcgtg ggcttgtggc aagctgcgca gtcattggcg aaaatctgcg ccggcgtttt
     9001 gccctggtcg atattggtct gggcatgcgc catggccgga cccaatcccg caacgaggcc
     9061 gatcgcggca gcaagacgcc tggtcaccct gacctcctca acttccccac gcgccccgcc
     9121 catgcttacc gcaaaactgc ggcaatgcga gccgggaatg gcagcgcctc ccgcgcgggg
     9181 cgggatcgct tgcgtggtca aggaggattt tgttttaatg acggcaagcc ccgaagccgc
     9241 gcctgcgcag aacgtcaggc gaacgggtgc aagcagcgcg cggcttggtc tggcgccgac
     9301 cgtcaccgtg gcggtcgcag accggtagag cgtggaggcg agcatggacc ggttgctctc
     9361 gatctttctc agtcggttta ttcgccaagg ttcgcttgac gtcactacgg cggccggcaa
     9421 cgtctacaca ttcggtgacg gcagcggcgc accggtatcg gtccgacttg ccaacgcaac
     9481 ggcccagcgt gcggtgttgc tcgatcccga gctccggctc ggcgaagcgt atatggacgg
     9541 cagtctggtc gtcgaacgcg gctcgatcgc ggacttgttg gaaatcctgt tccggcagga
     9601 acgtatcgcg gcgccgactt gggcgttgcc gccgcgggcg atccgccact cgttccgccg
     9661 cgtgcagcaa ttcaacccgc gctcacgctc acgacggaac gtggcgcacc actacgatct
     9721 cgacgggcgg ctgtaccagc tcttcctcga cgccgatcag caatacagct gcgcctattt
     9781 cgagtccgag cgtcagtcgc tcgacgacgc ccagctcgcc aagaggcgtc acctcgccgc
     9841 gaagctgcgc gtcgcccccg gggcgacggt gcttgatatc ggatgcggct ggggcggcct
     9901 cgccctctac ctcgccgaga ccgccaaggc gcgcgtcacc ggcatcacgc tgtcgaagga
     9961 gcagcacgcg cgcgcgaccg aaagagcctt ggagcgcggg caggcccagc aagcaagctt
    10021 ccggctcgag gattaccgcg acgttggcgg ccgcttcgac cgcatcgtct cggtcggcat
    10081 gttcgagcat gtcggcgtcg tgcactatcg cacattcctc gacaccgttg cgcgcagcct
    10141 gaagccggat ggcgtggcgc tgctgcacgc catcggccgc agcgacgggc cgggattcac
    10201 caatccctgg atcgcgaaat acatcttccc gggcggctat tgcccggcgc tgtccgaggt
    10261 gatcccgccg atcgagaaga gcgggctggt cgccaccgac atcgaagtgc tgcggctgca
    10321 ctatgccgag acattgcgca actggcgccg gcgcttcgcc gccaaccgcg acaccatcgc
    10381 ctcgctgtac gacgaacggt tctgccggat gttcgagttc tacctgtgcg gttcggagat
    10441 cgcgttccgc cgcgaagggc acatggtatt ccaggtccag cttgcccacg accagagcgc
    10501 cgtgccgctg acgcgcgact acatcacgga attcgacgcg gtgtcggtcg acaggcgacg
    10561 gtcgaacgtg atgagccagg gcaactgatc gcggcacgat gggtttcgct gcgctctgcc
    10621 catcctacgg aagccgccga agcgtgttgg cattcgtgtg gtgggatagg tagagcgcag
    10681 cgagacccat cacgccagac gccgcttgtt ccgaactgtc acccatccat cccgccatcc
    10741 atccccatgt accccattct ccacaggggc gaataactcc ccgaacgact ccgggcggcg
    10801 tatgctgcgc tcgccgtgaa caccatcgat tcgcccctcc tcggtctgtc gc
//
LOCUS       DATMQB010000225         9613 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3180784, whole genome shotgun sequence.
ACCESSION   DATMQB010000225 DATMQB010000000
VERSION     DATMQB010000225.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9613
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3180784"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1735)
                     /gene="yidC"
                     /locus_tag="VNY79_06810"
     CDS             complement(<1..1735)
                     /gene="yidC"
                     /locus_tag="VNY79_06810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0032977 - membrane insertase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HWX72192.1"
                     /translation="MTEHKNTILAIVLSLVVVVGWQFFVGYPQMEKQRQEALLKQREQ
                     AHPQPGASQPGAAQPATPAPQAGQVSAPPVPGGSAAPGAAPSGAPAREGVVTASPRVM
                     ISTPTVNGSIDLKGARIDNLALEQYRETVDPRSPPIVLFAPSGAPDAYYAEFGWVPAA
                     ATAQKVPGPDTVWKQEGGGALTADHPVTLSYDNGDGLIFRRTIAVDDHYLFTIRDEVQ
                     NKSGSPVTLFPYGLISRHGTPKVLGYYILHEGLIGVMGNEGLQEETYKKIEDKKNESW
                     EVTNAWLGFTDKYWAAALLPDTDAKVHARFSAGEAGGQKTYQTDYLLEPQTIAPGATG
                     AADARLFAGAKEVSVVGINFPFAVSGGYNQALHLNHFDLLIDWGWFYFITKPMFLAID
                     FFFHLVGNFGIAILIVTVLVKLLFFPLANKSYASMAKMKAVQPELAMIRERYGDDKMK
                     QQQAMMELYKKQKINPVAGCLPIAIQIPVFFSLYKVLFITLEMRHAPFYGWIHDLSAP
                     DPTNIFTLFGMIPFDPTVLPLVGSFLHLGIWPAIMGVTMWVQMKLNPAPPDPTQQMIF
                     NWMPIIFTFMLA"
     gene            complement(1736..2257)
                     /gene="rnpA"
                     /locus_tag="VNY79_06815"
     CDS             complement(1736..2257)
                     /gene="rnpA"
                     /locus_tag="VNY79_06815"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: protein motif:HMM:TIGR00188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004526 - ribonuclease P activity
                     [Evidence IEA];
                     GO_process: GO:0006396 - RNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HWX72193.1"
                     /translation="MRSRSARSVVAIERLRRRSDFRAAAGGTRASANAFVLQARQRGD
                     EGAVRVGFTVSRQVGNAVERNRVRRRLREIVRLSAAAEGATGPDSLRPGHDYVLIGRR
                     AALVLPFGEMMQELDAALGRIHAAAAGRTGGAQPGALHEPGSPAKARKARRSGRRPPE
                     SREQQRRSPRREP"
     gene            complement(2250..2384)
                     /gene="rpmH"
                     /locus_tag="VNY79_06820"
     CDS             complement(2250..2384)
                     /gene="rpmH"
                     /locus_tag="VNY79_06820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010659431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HWX72194.1"
                     /translation="MKRTYQPSKLVRKRRHGFRARMATKGGRRVLAARRAHGRKRLSA
                     "
     gene            2730..4157
                     /locus_tag="VNY79_06825"
     CDS             2730..4157
                     /locus_tag="VNY79_06825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015599884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HWX72195.1"
                     /translation="MAEPLTPDICVIGADAGGLAVAAAAASFGVPTVLIDTGGMGESV
                     KTSGRASLRALMAAAERAHAVRNGARFGVKSGRTSVDFPTVTANMRDVIAALAPNAAR
                     ERFVGLGVRIFKGAARFTDASTVAVDDVTITARRFVIATGSSPVLPAISGLLDTTHFT
                     TETLPEMGERPGHLIVIGAGAEGLELAQAFRRLGSKATVLDATPPLAGEDRECAAILL
                     DALEREGIRLRSGVEIAKVSRSFGKVHVVLATQAGSETIQGSHLLIAVGRRPNMHDLN
                     LEAAGIRYGDQGIVVDGSLRTSNKRIYAIGGVTDGPKSDNAGPYHATLVIRHALLQLP
                     VRANHDSVARVAFTDPEFAHVGLQEEEARARKGVIRVLRWPFRANERAVAERRTDGHI
                     KVITDRNGNVLGATIVGPQAGEGIAIWTLAVAQKLNVRALAGVAVPRPSYGEMAKDAA
                     LTYFTRSLTSARVRRIIGWLRRYGR"
     gene            4186..5652
                     /locus_tag="VNY79_06830"
     CDS             4186..5652
                     /locus_tag="VNY79_06830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing sensor histidine kinase"
                     /protein_id="HWX72196.1"
                     /translation="MTDETAARPPVVRAPRFGLSGKLLVLTILFVMIAEVLIYVPLVA
                     NFRVHWLRDHLAGAYTAALVLEAAPSGMVPESLAKQILDSIGARAVAMKMGTSRRLLA
                     IGDAPPPVTHDFDMREVYTFDSIVDAFMTMLDTKNDVMRVVGPAPMGGDFIELVMDEP
                     PLRKAMLRYSVNLLLLSLLVIGIAAAFVYLVLHYLFVRPMRRITGNMVAFRADPENAD
                     RIIVPSGRADEIGTAEQELATMQAELASMLQQKNRLAALGLAVSKINHDLRNLLGSAQ
                     LISDRLSSLPDPGVQRFAPKLMRALERAIAFCQSTLSYGRLQEPPPERRPILLEPLVD
                     EVHETLGLGPDAPVRWISAVERGLVVEADYDQLFRSLLNLARNALQALESRAARDPGR
                     DQIRITGRREGAVVVIEVSDTGPGFSERARAHLFEAFQGSTRTGGAGLGLAIAAELIR
                     AHGGEIRLVEGTIGATLRLTIPDRAVELSAHRGARAHG"
     gene            complement(5697..6122)
                     /locus_tag="VNY79_06835"
     CDS             complement(5697..6122)
                     /locus_tag="VNY79_06835"
                     /inference="COORDINATES: protein motif:HMM:NF012514.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HWX72197.1"
                     /translation="MTDSLAARFPVSIKGVVEHDGLFVLLKNERDEWELPGGKLEPGE
                     AIEDCLVREIDEELNLPVAVGRPLNNWVYFVNGVHVLVITYALQILGDEADMRISHEH
                     KELRSFPLEEIAGLRMPDGYKRSITLHAETTRNRGERRA"
     gene            complement(6150..7613)
                     /locus_tag="VNY79_06840"
     CDS             complement(6150..7613)
                     /locus_tag="VNY79_06840"
                     /inference="COORDINATES: protein motif:HMM:NF012927.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72198.1"
                     /translation="MWRPPQRIRFTASAGRAPSAAEAAASRLFSPIDIGPVSLAQRTW
                     VPAMVPWRATEEGHVTEEIIEWYERFARGMPGAIVVEATGIRDVRSGPLLRIGHDRFQ
                     PGLRRLVETVRRASEGRTRLLIQLIDFLTIRRRPEPKKFFERFLAITGRHRAALGEPE
                     LSDAEVRDRLSAMNGDELARVLTPAECEALEFGYRERVTDTEHAHIRSLPEVLPTLFA
                     DAAARAEQAGFDGVELHYAHAYTMASFLSRTNTRADGYGGSLANRVRLPLEVFAAVRA
                     RVGKGFAVGCRFLADECIDGGSAADDAVYFGVAFARAGMDFLSTSRGGKFDDAKQPAV
                     GAAAYPYTGRSGYECMPQFISDERGPFGRNAAPTAAIRSAVRAAGSGVPVVLTGGIHN
                     FEMAEDYLARGICDIVGAARQSLADPDWFRKTLLGLGREVRLCEYTNYCEGLDQKHKP
                     VTCKLWDKLPLADGERRTPDGKRRLTAPAWHVPDRRS"
     gene            7798..7874
                     /locus_tag="VNY79_06845"
     tRNA            7798..7874
                     /locus_tag="VNY79_06845"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7832..7834,aa:Arg,seq:acg)
     gene            complement(8523..8924)
                     /locus_tag="VNY79_06850"
     CDS             complement(8523..8924)
                     /locus_tag="VNY79_06850"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72199.1"
                     /translation="MRHAGVLRASIRVDAGTAGPGGTMVQLTACVLDFWIFPELSAPL
                     VSVKPFVDQGMSHRFRLLAVAVYDFSGHFNVPGMNRYDPLVSLNPSADGISYTSMLHS
                     DMLHSNSKLSNALRPTWRRAEPREQSQHLPG"
     gene            9356..9559
                     /locus_tag="VNY79_06855"
     CDS             9356..9559
                     /locus_tag="VNY79_06855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72200.1"
                     /translation="MFKILELKGNSTQAAEVGRRHSRREEALAAVKKHLKTFKASGHN
                     PEANYWWARDSEGLRKCWIASIE"
BASE COUNT         1674 a         3167 c         3061 g         1711 t
ORIGIN      
        1 tcgccagcat gaaggtgaag atgatcggca tccagttgaa gatcatctgc tgggtggggt
       61 cgggcggcgc cggattgagc ttcatctgca cccacatggt cacccccatg atcgccggcc
      121 aaatgccgag atgaaggaag ctgccgacga gcggcagcac cgtggggtcg aacgggatca
      181 tcccgaacag ggtgaagatg ttggtcggat cgggcgcgga aagatcgtga atccagccgt
      241 agaacggcgc gtgccgcatc tccagcgtga tgaacagcac cttgtagagc gagaagaaca
      301 ccgggatctg gatcgcgatc ggcaggcagc cggcgaccgg attgatcttc tgcttcttgt
      361 acagctccat catcgcttgc tgctgcttca tcttgtcgtc gccgtagcgc tcgcggatca
      421 tggccagttc cggctgcacc gccttcatct tcgccatcga ggcgtaggac ttgttggcga
      481 gcgggaagaa cagcagcttg accagaaccg tgacgatcag gatggcgatg ccgaaattgc
      541 cgacgagatg gaagaagaag tcgatggcga ggaacatcgg cttggtgatg aagtagaacc
      601 agccccagtc gatcagcaga tcgaaatggt tgaggtggag cgcctgattg tagccgccgc
      661 tgaccgcgaa ggggaaattg atgccgacca ccgagacttc cttggcgccg gcgaacagcc
      721 gggcgtcggc agccccggtc gcaccgggcg cgatggtctg cggctcgagc agataatcgg
      781 tctgataggt cttctggccg ccggcctcgc cggcggagaa gcgggcgtgc accttggcgt
      841 cggtgtcagg caacagcgcc gcggcccaat atttgtcggt gaagccgagc caggcgttgg
      901 tcacctccca gctttcgttc ttcttgtctt cgatcttctt gtacgtctcc tcctgcaggc
      961 cctcgttgcc catcacgccg atgaggccct cgtgcaggat gtagtagccg agcaccttcg
     1021 gcgtgccgtg gcgtgagatg agcccatagg gaaacaaggt gaccgggctg ccgctcttgt
     1081 tctggacttc atccctgatc gtgaacagat aatgatcgtc caccgctatg gtgcggcgga
     1141 agatcagtcc atcgccgtta tcgtagctca gcgtgaccgg atgatcggcg gtcagcgcgc
     1201 cgccgccttc ctgcttccag acagtatcgg gacccggcac tttctgcgcc gtggccgcgg
     1261 ctggcaccca gccgaactcc gcgtaatagg cgtccggagc gcccgacggc gcgaacagca
     1321 cgatcggcgg cgagcgggga tcgacggtct cgcgatattg ctcgagcgca aggttgtcga
     1381 tgcgggcgcc cttgaggtcg atgctgccgt taacggtcgg ggtcgagatc atcacgcgtg
     1441 gcgatgcagt gaccacccct tcccgcgcgg gcgcgcccga cggcgccgca ccaggggcag
     1501 ccgatccgcc cggcacgggc ggcgcgctga cctggccggc ttgtggcgcc ggggtagcgg
     1561 gctgcgcagc cccgggctga cttgcgccgg gctgcggatg cgcctgctcc cgctgcttga
     1621 gcagcgcctc ctggcgctgc ttttccatct gcgggtagcc cacgaaaaac tgccagccga
     1681 ccacgacgac gagcgacagc acgatggcga ggatggtgtt cttgtgctcg gtcattcaag
     1741 gctctcgccg cgggcttcgc cgctgctgtt cgcgcgattc cggcggtcgc cttccgcttc
     1801 ggcgcgcctt tcgcgctttg gcgggcgaac ccggctcatg tagggcgccg ggctgggccc
     1861 caccagttct cccggcagcg gcagcgtgaa ttcggccgag cgccgcatcg agttcctgca
     1921 tcatttcgcc gaacggaagg acaagggccg cccgccgccc gatcagtaca taatcatggc
     1981 cggggcgcag actatcgggc ccggttgcac cctcggccgc agccgacaat ctcactatct
     2041 cccgcaatcg ccggcgcacg cggttgcgtt cgacggcatt gcctacctgt ctcgatacgg
     2101 tgaatccgac acgcaccgcc ccttcgtcgc cgcgttgccg cgcctgcaga acgaaggcgt
     2161 ttgccgacgc ccgcgtgccg ccggcggcgg cgcgaaaatc gctccgccgt cgcaaccgct
     2221 cgatggcgac gacggaacgg gcgctccgac tacgcactga gccgcttgcg cccgtgcgcg
     2281 cgacgcgcag cgagaaccct gcgcccgcct ttggtcgcca tccgggcgcg gaaaccgtgc
     2341 cgacgcttac gcaccaattt gctcggttga taggtgcgtt tcacggggtt gactctccgg
     2401 gacgcgctcg atttttggcc gatgcatcga gcgaacggat caatttcgcg cgccggcgcg
     2461 cgacaaacgc ggcgttatac gggagccctt cccgctcgtc aatgtgacgc ggcgcactga
     2521 ccgcagccgc cgatcggcgc caacggcggc agccttccgg ctgttgttcc aagcgttgtt
     2581 tttccgggta tagagatatg gaatatatgt gacgggacag agacctcggg gacgccgaca
     2641 tatgtttagc caagagctgt ttaaccagga gcagcctgtg ccgaggttgg ctgcaaatcc
     2701 gcgccgcggg cggcgtggcc ggccggccga tggctgaacc gctgacgccg gacatctgcg
     2761 tgattggcgc cgacgcgggc gggcttgccg tcgcggctgc ggccgcgtcc ttcggcgtac
     2821 ctacggtgct gatcgacact ggcggcatgg gcgaaagcgt caaaacttcc ggacgggcgt
     2881 cgctgcgcgc cctgatggcg gcggcggagc gcgcgcacgc ggtccgcaac ggcgcgcgct
     2941 tcggcgtgaa atcagggcgt accagcgtcg attttccgac cgtgaccgcg aatatgcgcg
     3001 atgtcatcgc cgctcttgcg ccgaacgccg cgcgcgaacg tttcgtcgga cttggcgtgc
     3061 gtatcttcaa aggcgcggcg cgcttcaccg atgcaagcac tgttgccgtg gacgacgtga
     3121 ccatcacggc gcgccgcttt gtcatcgcca ccggctcctc gccggtgctg ccggcgattt
     3181 ccggccttct cgatacgacg cacttcacca ccgaaacgct gcccgagatg ggtgagcgtc
     3241 ccggtcacct catcgtcatc ggcgccggcg cggagggcct cgaactggcg caggcgttcc
     3301 gccggctcgg ctccaaggcc acggtgctgg atgcaacacc gccgctcgcc ggtgaagacc
     3361 gcgaatgcgc ggccatcctg ctcgatgcgc tcgagcgcga gggcataagg ctgcgcagcg
     3421 gagtcgagat cgcgaaggtg agccgctcgt tcggcaaggt gcatgtcgtg ctcgccacgc
     3481 aagcggggag cgagacgatc caaggcagcc atctgctcat tgccgtcggc cggcgcccga
     3541 acatgcacga cctcaatctc gaagccgccg gtatccgcta cggtgaccag ggcatcgtcg
     3601 tcgacggcag cctgcgcacc agcaacaagc gcatctatgc gatcggcgga gtaaccgacg
     3661 ggcccaaatc cgacaatgca ggcccttacc atgccaccct ggtgatccgc catgcactgc
     3721 ttcagctgcc ggtcagggcc aatcacgaca gcgtcgcgcg ggtggccttc accgatccgg
     3781 aattcgccca tgtcggtctc caggaggagg aggcacgggc gcgcaagggc gtcatccgcg
     3841 tcctgcgctg gcccttccgt gcgaacgagc gcgccgtcgc cgaacgaagg actgacggcc
     3901 acatcaaggt catcaccgac cgcaacggga acgtcctcgg cgccaccatc gtcgggccgc
     3961 aggccggcga gggtatcgcc atttggacgc tggccgtcgc ccagaagctc aacgttcgcg
     4021 ccttggccgg cgttgcggtt ccgcgcccgt cctacggcga aatggcaaaa gatgcggcgc
     4081 ttacctattt cacccgcagt ttgacgagcg cccgggtgcg tcgcatcata gggtggctgc
     4141 gtcgctacgg tcgatgatcg accggcggca agccgggcac cgccgatgac tgatgaaacc
     4201 gccgcgcggc cgccagtggt ccgcgcgccg cgcttcgggc tttccggaaa gctcctcgtt
     4261 ctcacgatcc tgttcgtgat gatcgcggag gtgctgatct acgtgccctt ggtcgccaat
     4321 ttccgcgtgc attggctgcg cgaccatctg gccggcgcct ataccgcagc gctggtgctc
     4381 gaggccgcgc cgagcggaat ggtgcccgaa agcctcgcca agcagatcct cgacagcatc
     4441 ggcgcccgcg ccgtcgccat gaagatgggc accagccggc gcctgctggc gatcggtgac
     4501 gcgccgccgc cggtcaccca cgacttcgac atgcgcgagg tctacacctt cgattcgatc
     4561 gtcgatgcgt tcatgacgat gctcgacacc aaaaatgacg tgatgcgcgt ggtcggcccc
     4621 gcgccgatgg gcggcgattt catcgaactc gtcatggacg agccgccgct gcgcaaggcg
     4681 atgttgcgct attcggtgaa cctgcttctg ctgtcgctgc tcgtcatcgg catcgccgcg
     4741 gccttcgtct atctcgtcct gcactatctg ttcgtgcggc cgatgcggcg gatcaccggc
     4801 aacatggtgg cgttccgcgc cgatccggaa aacgccgacc gcatcatcgt gccgtccggt
     4861 cgcgccgacg agatcggcac cgccgagcag gagctcgcca ccatgcaggc cgaactcgcc
     4921 tcgatgctgc agcagaagaa ccggctcgcc gcacttgggc tcgcggtgtc gaagatcaac
     4981 cacgatctgc gcaacctgct cggctcggcg cagctcattt ccgaccgctt gtcgagcctc
     5041 cccgaccccg gcgtgcaacg ctttgcaccc aaactgatgc gcgcgctcga acgcgccatc
     5101 gccttctgcc agtcgacact gtcctacggc cgcctgcagg aaccgccgcc cgagcgccgg
     5161 ccgatcctgc tcgagccgct ggtcgacgag gttcacgaga cgctcggcct cgggcccgac
     5221 gcgccggtcc gctggatcag cgcggtcgag cgcggcctgg tggtggaagc cgactacgac
     5281 cagctcttcc ggagcctgct caacctcgcg cgcaacgcgc ttcaggcgct ggagagccgc
     5341 gctgcacgcg accccggccg cgatcagatc cgcatcaccg ggcggcgcga aggcgcggtc
     5401 gtcgtcatcg aggtctccga caccggcccc ggtttttccg aacgggcgcg tgcgcatctc
     5461 ttcgaggcgt tccagggttc gaccaggacc ggcggcgccg gtctcggcct cgccatcgcc
     5521 gccgaactca tccgtgccca cggcggcgaa atccgcctcg tcgaaggcac gatcggcgcg
     5581 acgctgcggc tcaccattcc cgaccgcgcc gtggagttga gcgcgcatcg cggcgcccgc
     5641 gcgcacggat gagccgcgcg gggcgcggcc cggccgcttg tcacgcccga gggcggtcag
     5701 gctcgccgtt cgccccggtt gcgggtagtc tcggcgtgta gcgtaatgga ccgcttgtaa
     5761 ccgtcaggca tccgcagtcc ggcgatctcc tccagcggga acgaccgcaa ttccttgtgc
     5821 tcgtggctta tgcgcatgtc ggcctcatca cccaaaattt gcagcgcgta ggtgatgacg
     5881 aggacatgga cgccgttgac gaagtagacc caattgttca atggcctgcc gactgcgacc
     5941 ggcaagttca gttcctcgtc gatctcgcgg acgagacaat cctcgatcgc ttctcccggt
     6001 tcgagcttgc cgcccggaag ctcccactcg tcgcgctcgt ttttcagaag gacaaaaagt
     6061 ccgtcgtgct cgaccacgcc ttttatcgat accgggaagc gcgccgccag actatcggtc
     6121 atgtcgctat tccaaaggtg cgccttcggc tacgaacggc gatccggcac gtgccacgcc
     6181 ggcgcggtca gccgccgctt gccgtcaggc gtccgccgtt cgccgtccgc taaaggcagc
     6241 ttgtcccaga gcttgcaggt gaccggcttg tgcttctggt cgagcccctc gcagtaattg
     6301 gtgtattcgc acaggcgaac ctcacggccg aggccgagca aagtttttct gaaccaatcc
     6361 ggatcggcca gcgattgtcg cgcagcgccg acaatgtcgc atatgccgcg cgcgagatag
     6421 tcctcggcca tttcgaaatt gtggatgccg ccggtcaaga ccaccggcac gccgctgccg
     6481 gcagcgcgga ccgcgctgcg gatcgcggcg gtcggcgccg cgttgcggcc gaacggcccg
     6541 cgctcgtcgg aaatgaactg cggcatgcac tcgtagccgc tgcgcccggt atagggatag
     6601 gcggcggccc ccacggcggg ttgcttggcg tcatcgaact tgcccccgcg cgaggtcgaa
     6661 agaaaatcca tgccggcgcg agcgaaggcg acgccgaaat agaccgcgtc atcggcagcg
     6721 ctgccgccat cgatgcattc gtccgccagg aaccggcagc ctaccgcaaa tcccttgccg
     6781 accctggcgc gcactgcggc gaagacttcg agcggaaggc gcacgcggtt cgccagcgat
     6841 ccgccgtagc cgtcggcgcg agtgttggtg cgcgacagga acgaggccat cgtataggcg
     6901 tgcgcgtagt gcagctcgac gccgtcgaac cctgcctgtt cggcgcgtgc ggcggcgtcg
     6961 gcgaaaagcg tcggcagcac ttctggcagg ctgcggatgt gcgcgtgctc cgtgtcggtg
     7021 acgcgctcgc gatagccgaa ctcgagcgct tcgcactcgg ctggggtaag gacgcgcgca
     7081 agctcgtcgc cgttcatggc gctcaggcgg tcgcggacct cggcgtccga cagctccggc
     7141 tcgcccagcg cggcccgatg ccggccggtg atggcaagga agcgctcaaa gaactttttc
     7201 ggctctgggc gccggcggat ggtaaggaaa tcgatcagct gaatgaggag gcgtgtgcgc
     7261 ccctcgctgg cgcgccgcac cgtttcaacg aggcggcgca gccccggctg gaaccggtcg
     7321 tgcccgatgc gcagcagcgg cccgctgcgc acgtcgcgga tgccggtcgc ctcgaccacg
     7381 atggcgcccg gcatgccgcg cgcgaaacgc tcgtaccact cgatgatctc ctcggtcaca
     7441 tggccttcct cggttgcccg ccacggcacc atggcaggca cccaggttcg ctgcgccaat
     7501 gagaccggac cgatgtcgat cggcgagaac aggcgcgacg ccgccgcttc cgcggcggac
     7561 ggcgcacgcc cggccgaggc tgtaaagcgg atccgctgcg gtggtcgcca cacggttttc
     7621 gctccgcggc attcggggac gccgccgcac aatcacttat ccatgcaatt acttatatat
     7681 cacgcgggcc ccctgcacgg ctgcggttcc acccgccgct tgccatgggc ccgtcgagcc
     7741 tatagctatg gcgcccgtcg cgagccgctc cacggatttt caagggcgac gcgcgctgcg
     7801 cccgtagctc agctggatag agcaccagac tacgaatctg ggggtcagga gttcgaatct
     7861 cttcgggcgc gccacttagt acccgtctgc aaacaccggg acggcgcgtt gtggctcgca
     7921 aggatcgctt tctcaaggac gtttttgctt ccctgcatcc ggacttggcg gtcatcaacc
     7981 tcaatggtgg cgatggctgc acgcaggctt tccggaaggc accgagccag ttgtgaaggt
     8041 ctctttcacc atgcggctga ggcgctcggt caacggcgga tcgcttcgga tttgacgagc
     8101 cgaagctctt ttgcgcgctc cagcgccttt tgcgcggtcc cgttgtgcct taacgacggc
     8161 gaggcggtcc ctcagcacgt catcgagttt cgtcaatccg ttctcaacaa gccggtgtaa
     8221 gcgcgcaagc ttttcatcgg ccgggcttcc tccgctgcaa agctatctat ccggctacta
     8281 aggctttccg ccttctcggc gcgcccagca gaaagcgggc cgcgcatcac gcaagccgtt
     8341 ccgacctgaa aagccgttcc atcagatgat tggtcgccga ccgatcgagc ttatccatcg
     8401 agatggggcg gccgccttga gattgacggt cagaccttcg tgattttgct ggaccggcag
     8461 gtcgaggacc cgcaattagg gccgccatgt ccggaacaaa ttaccgaagc atctcgtccg
     8521 gttcatcccg gcaaatgttg gctttgttca cgaggttcgg cgcgtctcca ggttggccgc
     8581 aaagcattgc taagtttcga atttgagtgc aacatgtcgc tatggagcat agaggtatac
     8641 gatataccgt ccgcactggg attgagcgag accaatgggt catagcgatt catcccggga
     8701 acattgaaat gaccggaaaa gtcgtaaacg gcaaccgcga gcaggcggaa gcggtggctc
     8761 attccctgat caacaaatgg cttgaccgac accagtggcg ctgaaagttc cggaaaaatc
     8821 caaaaatcca aaacacaagc cgttagctgc accatcgtgc cgcctggccc agcggtgccg
     8881 gcatctaccc ggatggaagc acgaagcacc ccggcatggc gcatggctat gcgccttgaa
     8941 acgaacacat ctatgcccca tgtaaaacgc aagcccgttc ggctcctgcg agccgcgtgt
     9001 gtggattccc gtcaaacggt ctctggctcg ctctttacat tttcattggc acctagtcgc
     9061 gcgaggtgtc cttaccgcac tgctgaccgt tacgcctcga tcgacggtcg cgtcggcgcg
     9121 caaacagaaa gctcttcctt gacctccttc gatggcttcg gccttaacga cacgattacg
     9181 cgaacaatcg cggaagaaga acacgctacg tcgaccccga accaagcgcc cacggtcccg
     9241 gtcgtcatgt cgcgccgcga cattatcgta gtgcgcctca tgaactctcc cgcgacgtcg
     9301 tcgaaacggt tcgcgcgacg taatgaactg caggggcacc ggaaggaagc cgataatgtt
     9361 caagattctt gagctgaaag ggaattcaac gcaggcggcg gaggtcggtc gccgccactc
     9421 caggcgcgag gaggcgttgg ccgcggtcaa gaaacacctg aagacgttca aagcgtcggg
     9481 acacaatcca gaagcaaatt attggtgggc ccgagattcc gaaggcctgc gaaagtgctg
     9541 gattgccagc atcgagtgaa taggcggcgg cgaaccgtgc tcagtttccc gaaccaaagc
     9601 cgagttttcg atc
//
LOCUS       DATMQB010000226        14128 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3794534, whole genome shotgun sequence.
ACCESSION   DATMQB010000226 DATMQB010000000
VERSION     DATMQB010000226.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 14128)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14128)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14128
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3794534"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1370)
                     /locus_tag="VNY79_06860"
     CDS             complement(<1..1370)
                     /locus_tag="VNY79_06860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HWX72201.1"
                     /translation="MPTFSRSLEQSLHRALALANERHHEYATLEHLLLALIEDQDAAA
                     VMRACNVDLDKLRRSLVAYLESELDNLVTDGAEDSKPTAGFQRVIQRAVIHVQSSGRE
                     EVTGANVLVAIFAERESHAAYFLQEQDMTRYDAVNYISHGIAKRPGLSEARPVRGADE
                     DTDAKSGDEPKKKGDALDAYCINLNKKARDGKIDPLIGREAEISRTIQVLCRRQKNNP
                     LFVGEAGVGKTAIAEGLARRIVHGEVPDVLRDATVFALDMGTLLAGTRYRGDFEERLK
                     QVIKELEAYPGAILFIDEIHTVIGAGATSGGAMDASNLLKPALASGTVRCIGSTTYKE
                     YRQYFEKDRALVRRFQKIDVNEPTIPDAIEILKGLKPYFEEYHKLRYTNEAIKAAVEL
                     SSRYIHDRKLPDKAIDVIDESGAAQMLLPESRRRRTIGIREIETTIATMARIPPKAVS
                     KDDAEVL"
     gene            complement(1409..1786)
                     /gene="clpS"
                     /locus_tag="VNY79_06865"
     CDS             complement(1409..1786)
                     /gene="clpS"
                     /locus_tag="VNY79_06865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease adapter ClpS"
                     /protein_id="HWX72202.1"
                     /translation="MPSSVNATVQFPARLADDDRKRKGDPSGPGTAVITKTRPQTKRP
                     NLYRVLLLNDDYTPMEFVVHVLEHFFNKDHETAQRIMMHVHQHGIGECGVYTYEVAET
                     KVTQVMDFARKHQHPLQCIMEKK"
     gene            2272..2472
                     /locus_tag="VNY79_06870"
     CDS             2272..2472
                     /locus_tag="VNY79_06870"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72203.1"
                     /translation="MADPARRAKLVRDLEQDFVPDYDAQNMPSGDKRAAYALEHIAFR
                     VGRIEQSLARIAAAIESVLSKG"
     gene            complement(2504..2842)
                     /locus_tag="VNY79_06875"
     CDS             complement(2504..2842)
                     /locus_tag="VNY79_06875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HWX72204.1"
                     /translation="MTMTAEEMQKLGNHSVEMAMSSLSSWTKNAQAIALEVADYSQKS
                     FAGTAAAWEKLMDAKSLEKAMEVQGDYLKSSYEDFVAQTAKVSELCAGLAKDACKPFE
                     DVLAKTSMTK"
     gene            3199..4893
                     /locus_tag="VNY79_06880"
     CDS             3199..4893
                     /locus_tag="VNY79_06880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HWX72205.1"
                     /translation="MGWVRSQAQCGLRYCVFGLAALAAGLFITSDAADARHHRRFYVH
                     YVRHVAHVHHRSRHAEEYAPPFSSLVIDGNSGEVLQASNADAMRHPASLTKIMTLYLL
                     FEELDAGRIRLDTPLKISAHAAEQAPSKLGLKPGQTIAVEDAIKAVVTKSANDVAVAI
                     AENLAGSEDEFARVMTQKAHALGMAHTTYVNASGLPDDEQLTTARDLALLGRTIADRF
                     PRYYRYFATPAFVYHGAAMRNHNHLLGAVAGVDGIKTGYTRDSGFNLVTSVHRDGRYL
                     VAVVLGGHSAFARDARMRELINSHIRQAALRHAGPRVAEGSDETDRQPEPLPAAPAKA
                     RVSSRPDPTPTASVSAHAPASSSEPIHPVMVKTISYRTAPMPAAALAPMPALVPVAAR
                     AAAPTPPAAAPATSASITQPGDGSRTVVVASAEPGEIAIAGKADPQRTAAKADIAKAD
                     VAKADIAKADIVKADIAKADIAKPEPAPPQAHGRGGWLIQIGAYDAEAEARQHLSAAQ
                     SQAHATLAAAEPFTERVQKGDKALYRARFAGFDRGAAEAACRELKRSDFECMAVRN"
     gene            complement(4992..5696)
                     /locus_tag="VNY79_06885"
     CDS             complement(4992..5696)
                     /locus_tag="VNY79_06885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaJ domain-containing protein"
                     /protein_id="HWX72206.1"
                     /translation="MPFLLGVVVLVLLLWAVKAFSKADPKQAARLIRSMGGIAALLLA
                     GFLLLRGQIWVAIPVGVFGLGLLGWQVPWPAILIGRTQKSPGQASRVRTAFLEMELDH
                     DSGAMHGRVLAGRHQGAALDALDLATLIGLIGEIDGDSRNLLMAYLDRREPGWREHAQ
                     YDAAAGNGGGATFGGKMTEQEAYQILGLQPGASAQEIGRAHRSLMKKLHPDQGGSTYL
                     AARINQAKEVLLRRHR"
     gene            complement(5699..6526)
                     /locus_tag="VNY79_06890"
     CDS             complement(5699..6526)
                     /locus_tag="VNY79_06890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008960685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HWX72207.1"
                     /translation="MRPCAPGATLGEVTNLRREGQAMSNDQSGRASATTREPSQRAAP
                     RQTPTAASSRAEIDAFLSHLNALGPVADTGGRGRLLFALDATMSRQPTWDQACMLQAD
                     MFREAASVGGLDIQLVYYRGLAECRTTPWIAEPQRLGALMSLIDCRGGHTQIAKILAH
                     ARRENDKARIGALVFVGDAMEEALDDLCAGAGELGVRNVPAFMFQEGYDPVCEQAFRE
                     IARLTRGAYCRFAPGAAHELGELLRAAAAYAAGGMKALADLQARQGAGAVRLIEQLK"
     gene            complement(6592..7515)
                     /locus_tag="VNY79_06895"
     CDS             complement(6592..7515)
                     /locus_tag="VNY79_06895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division plane positioning ATPase MipZ"
                     /protein_id="HWX72208.1"
                     /translation="MLMQADVGAPVSAHVIVLGNEKGGSGKSTTAMHVAVALLQAGQR
                     VATVDLDSRQRSFTHYLDNRRNWAARAGIKLDLPAHYCVVRGCGVRLDEVEAQEFGAF
                     AEAVSAVESTHDFVVIDTPGTDSYLMRLAHSMADTLITPLNDSFVDFDVLGTVDPTSF
                     VLTGVGHYAEMVREARRQRRLVDGGLTDWVVVRNRLSTLGSRNKRLVGEGVDELGRQL
                     GFRAIDGFAERVVYREFFPRGLTALDDINEDTLGQRPNPSHVTARDEVRNLVDALKLP
                     IDERGKRRAAARAEWIVAATKPLDTHGLLAD"
     gene            7656..8528
                     /gene="panC"
                     /locus_tag="VNY79_06900"
     CDS             7656..8528
                     /gene="panC"
                     /locus_tag="VNY79_06900"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004592 - pantoate-beta-alanine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0015940 - pantothenate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HWX72209.1"
                     /translation="MSKKFSGSQHRPRVVRGMPALRNTLARWRAQGERVALVPTMGAL
                     HQGHLTLVRLAQRRAERVIVSIFVNPAQFAPHEDFKTYPRTFAADVKALAALGTDLVW
                     APDAATMYPGGFATQVVPKGPAKAGLEDASRPHFFAGVATVVAKLLIQCAPDFAVFGE
                     KDFQQLKVVTQLARDLDLATRIVPAPTVREADGLALSSRNRYLSAAEREAAPTLHRVL
                     ADCAEKIAAGEPIGTVLPKGRRTIERAGFILDYLEARHAETLAPANSNKDGPIRLLVA
                     GKIGKTRLIDNVGV"
     gene            complement(8567..9508)
                     /locus_tag="VNY79_06905"
     CDS             complement(8567..9508)
                     /locus_tag="VNY79_06905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015886715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0018576 - catechol 1,2-dioxygenase
                     activity [Evidence IEA];
                     GO_process: GO:0009712 - catechol-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dioxygenase"
                     /protein_id="HWX72210.1"
                     /translation="MIINGEQDVTKAVQSELDRAPDPRFREIMSAFIRHLHDFAREVK
                     LTEEEFQTAVGYIVALGKHTNENHNEAVLMAGSLGFSALICLLNNGDRGQTETDASQL
                     GPFWRMNSPRMANGASIVRSPTPGPALFVEASFRDAEGKPIEGAEVDVWHSSPEGFYE
                     NQDPVQSEMNLRGKFVTDVGGRISFRSVKPAGYPIPIDGPVGEFLRAQRRHNMRPAHL
                     HFLAYKPGFKTLISQVYAPDDKHIDNDVQFGVTRHLIGNYVRHDEPRAGTADVTPPWY
                     SLDHALVMERGVARLPRAPISGKAHGERPQIPHLEPA"
     gene            complement(9642..10079)
                     /locus_tag="VNY79_06910"
     CDS             complement(9642..10079)
                     /locus_tag="VNY79_06910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1489 family protein"
                     /protein_id="HWX72211.1"
                     /translation="MPLHLIKLCVGCDSVRDLQDWIKQRLKEKRRRGEKPEHIHRTRM
                     VPKRAAELTDGGSLFWVIRGEIACRQRIRAVRPFRDKDGIGRCGLVLDPKVVLVAPRP
                     FRAFQGWRYLAPKDAPRDLAKAAPGAAAMPEKLRRELSQLGLM"
     gene            complement(10089..12029)
                     /locus_tag="VNY79_06915"
     CDS             complement(10089..12029)
                     /locus_tag="VNY79_06915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018097160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin carboxylase N-terminal domain-containing
                     protein"
                     /protein_id="HWX72212.1"
                     /translation="MFSSVLIANRGEIACRIARTAKRLGMRTIAVYSAADARALHVRL
                     CDEAHCIGPAEPRESYLSIERLIEAARSSGAACVHPGYGFLSENADFAEACARADLVF
                     VGPPAAAIRAMGLKDRAKALMEKAGVPVVPGYHGERQDAKFLKEKAYEIGYPVLIKPA
                     AGGGGRGLRRVDKHADFDDALEAAVREVAAAFGSGRVLIEKYVNAPRHVEFQVFADTH
                     GNVIHLGERDCSLQRRHQKVIEEAPAPGMTANLRAQIGAAAVEAAKAVGYVGAGTVEF
                     VADGSKALRPDRIWFIEMNTRLQVEHPVTEAVTGLDLVAWQFKIAAGEALPLTQKDVR
                     FDGHAVEARVYAEDPEHDFLPSTGPIVAMELPTDVRVDSGIEAGGEVTPFYDPMIAKL
                     IARAPTRTAALDRLAEALDHTAIVGVRSNVAFLAALCRAHDFREGRVDTGFIDRNLAA
                     LGAVPHGPDRAAAALGVARLLAGEPSGPETAEPYSPWDARDGFQLTGTRRIEVPIFIG
                     ADAAAATVAFGKDGMHVMVGDAAPAADARAFAAGQDVYVLRHGRQTRLRLKDVAVAAA
                     EAGGGDGVVKAPMHGRVLELFVAVGDLVSGGQRLAVIEAMKMEHTLRAPFAGTVRRVA
                     AIAGAQVVEGGEIVVIERSEQG"
     gene            complement(12193..13287)
                     /locus_tag="VNY79_06920"
     CDS             complement(12193..13287)
                     /locus_tag="VNY79_06920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72213.1"
                     /translation="MLGVDSEIGTSALRLWVTAGSAALLVFLCGLTFVLPTTRTAEAV
                     RAILVAVGAALGAAITWASFGGSGNASVERRALELRVAELTTRTLAPGSPLACLDALA
                     GEKVETACEKAIFASPESVASATSYVAARLALLSDITAYAGRNGATIDAAPLLRRALE
                     TDRFGFLAHVLAARDGCTSENCTALGLLGDPRQVRTNLSEATFNRVLESYLPIWAKAS
                     EPAVAEVPQVQAAAPAAPANASGPRKIVNIDFPTAASIPAVNIMNPEPTGPVLPGAAA
                     AAANPNAQSAAPASSRRSHKPAANPPAPAAVQLAAPGQQAAVEPIWPEPLPPRPAVGP
                     AAAAPPPAQVNPVPFAPAPDANAAAAARGQ"
     gene            complement(13501..13701)
                     /locus_tag="VNY79_06925"
     CDS             complement(13501..13701)
                     /locus_tag="VNY79_06925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72214.1"
                     /translation="MLSTHKFRVGQTVLFTSSPITRPGASGTYKVVRLLPSDGDDYQY
                     RIKNPGEAFERVAKESQLELEH"
BASE COUNT         2359 a         4686 c         4606 g         2477 t
ORIGIN      
        1 agcacctcgg cgtcgtcctt cgacaccgcc ttcggcggaa tccgcgccat ggtggcgatc
       61 gtagtctcga tctccctgat gccgatggtg cgccggcggc ggctctccgg cagcagcatc
      121 tgcgccgcgc cggattcgtc gatcacgtcg atcgccttgt cgggcagctt gcggtcatgg
      181 atgtagcgcg acgacaattc gaccgcagcc ttgatcgctt cgttggtgta gcggagcttg
      241 tgatactcct cgaaataggg ctttaggccc ttgaggattt cgatggcgtc ggggatggtc
      301 ggctcgttga cgtcgatctt ctggaaccgg cgcaccagag cgcggtcctt ctcgaaatat
      361 tggcggtatt ccttgtaggt ggtcgaaccg atgcagcgca cggtgcccga cgccaaggcc
      421 ggcttgagca ggttcgatgc gtccatggcc ccgccggacg tggcgccggc gccgatcacg
      481 gtgtggatct cgtcgatgaa caggatggca ccgggataag cctcgagctc cttgatgacc
      541 tgcttgagcc gctcctcgaa atcgccgcga tagcgcgtgc cggcaaggag cgtgcccatg
      601 tcgagcgcga acacggtggc gtcgcgcagc acgtccggca cctcgccgtg gacgatgcgg
      661 cgcgccagcc cctccgcgat cgcggtcttg ccgacgccgg cctcgccgac gaacagcgga
      721 ttgttcttct gccgccggca cagcacctgg atggtgcggc tgatctcggc ctcgcggccg
      781 atcagcgggt cgatcttccc gtcgcgcgcc ttcttgttaa gattgatgca gtaggcgtcg
      841 agcgcgtcgc ccttcttttt cggctcgtcg ccgctcttgg cgtcggtatc ctcgtcggcg
      901 ccgcgcaccg ggcgcgcttc cgacaggccc ggccgcttgg cgatgccgtg gctgatgtag
      961 ttgaccgcat cgtagcgcgt catgtcctgc tcctgcagga agtacgcggc atggctctcg
     1021 cgttcggcga agatcgcgac cagcacgttg gcgccggtca cctcttcccg gccggatgac
     1081 tggacgtgga tcaccgcgcg ctggatcacg cgctggaagc cggcggtcgg cttggaatcc
     1141 tcggcgccgt cggtgacgag gttgtcgagc tcggattcga ggtaggcgac gagactgcgg
     1201 cgcagcttgt cgagatcgac attgcacgcc cgcatcaccg cggctgcgtc ctggtcttcg
     1261 atcagcgcca gcaagaggtg ctccagcgtg gcgtattcgt ggtggcgctc gttggcgagc
     1321 gccagcgcgc ggtggagcga ctgttcgagg ctgcgcgaga acgtaggcat tcaggttctc
     1381 ttcctttgta ttggccgctc ccccggaact acttcttttc catgatgcac tgcagaggat
     1441 gctgatgttt gcgggcaaag tccatgacct gcgtcacttt ggtttccgca acctcgtagg
     1501 tatagacccc gcactctccg attccgtgct ggtgaacgtg catcatgatt cgttgggcgg
     1561 tttcgtggtc cttgttgaag aagtgctcga gcacgtggac cacaaactcc atcggcgtgt
     1621 agtcgtcgtt gagcagcagc acacgataca ggtttggccg cttcgtttgc ggccgcgtct
     1681 tggtgatgac cgcggtcccc ggaccgctcg ggtcgccctt gcgcttgcgg tcgtcgtccg
     1741 cgagccgggc tgggaattgg acggtggcat tcacgctcga aggcattgtt cgttctgtcg
     1801 tccagaggcg ttattgcgcg gtcgatggac cgcggagaag cccggcagga tttcgccccc
     1861 ggcactctcc cgcaccctat tatagttttg gaacggcttg ctttccagtt cgacggcgtg
     1921 acgccaagcg tacagccgat cgcctccctg ctgcgttcgg atctgcgcgg gcgcggcatc
     1981 cctagtgggc cgcggctgcg tcgtgcgccg cgcgcgttcg gcgcgtcacg atcgcaaagg
     2041 gattgcgggt aaatcgcggc aaggcggtcg agacgttcag caccaagcac catgcgatgc
     2101 gccctagtcg ggtcccggac caataccaac ttgctcgcca cgggattgat ccagccaccc
     2161 ctggctgtca tgccagcggt gccgcgtcgc cccgaacgcc cgttggtagt gctttgccga
     2221 ctcggctatt catcgcatct ctcatcgcac gggctgcgac aggaggtgat catggccgac
     2281 cccgcacgcc gcgcaaaact tgtccgcgac ctggagcagg acttcgtccc ggattacgac
     2341 gcccagaaca tgccctcagg cgacaagcgg gcggcctatg ccctcgaaca catcgccttc
     2401 cgggtcggcc ggatcgagca gagcctggcg cgcattgccg ccgcgatcga gtcagtgctg
     2461 tcgaagggct gacccgccgc cctctccatg gcggcaggcc ttctcacttc gtcatcgacg
     2521 ttttggccaa cacgtcttcg aacggcttgc aggcatcctt ggcaagaccg gcgcaaagct
     2581 cactgacctt agccgtttgg gccacaaaat cctcgtacga ggatttcagg tagtcgcctt
     2641 gcacctccat ggctttttcc aaactcttgg cgtccatgag tttttcccag gcggcagcgg
     2701 tgcccgcgaa cgatttctgc gaatagtcag cgacctcgag ggcgatggct tgcgcgttct
     2761 tcgtccagga gctcaaggag ctcatggcca tctcgacgct gtggttgcca agcttctgca
     2821 tctcttctgc tgtcattgtc attcttcccg gcgcgatgtg cggcctgtgg ttagcgttgg
     2881 cgttgtcggg ttactgcctt gaaaaggcct tctggagcat cgtatgatat tatagtgcgc
     2941 tgcacaaaaa ctgcaacggg tgtcgatgca gcgcacaatg atgccgcggc gacttaacgc
     3001 tttcgcaacg gcgttcgcct agcgtggttg gccgtgtcgt cggtgtgacg acggtccttg
     3061 gttggggggc aatgcctcct tcatcggaga ggcgctcaat cggcgacctc gccgtggaag
     3121 gaaagcaccc tcccagtgag tagacagggg gtgggctccg tgacggagct cagcgcgcgt
     3181 tcagggacgg ggtgcgtaat gggatgggtg cgttcgcagg cccagtgcgg gcttcgctat
     3241 tgcgtcttcg gtcttgccgc cctcgcggcg ggtctcttca tcaccagcga cgcagctgac
     3301 gcgcggcacc accgccgctt ctacgttcat tacgtgcgcc acgtcgcgca tgtccaccac
     3361 cgcagccgtc acgccgaaga atacgcgccg cccttctcct cgctggtcat cgacggcaac
     3421 agtggcgagg tgctgcaggc gtcgaacgcc gatgcgatgc gtcaccccgc ctcgctgacc
     3481 aagatcatga cgctctacct cctgttcgag gagctcgatg ccgggaggat caggctcgac
     3541 acgccgctga agatctccgc ccatgctgca gagcaggccc cttccaagct cggcctcaag
     3601 ccgggccaga ccatcgcggt cgaggacgcc atcaaggcgg tggttaccaa atcggcaaat
     3661 gacgttgccg ttgccatcgc cgaaaacttg gcgggcagcg aggatgagtt tgcccgggta
     3721 atgacccaga aagcgcacgc tctgggcatg gcccacacca cgtatgtcaa cgcatcaggt
     3781 ctgccggacg acgagcagct gaccaccgcg cgcgatctgg cgctgctcgg gcgcacgatc
     3841 gcggatcgct ttccgcgcta ctacaggtat ttcgcgacgc ccgctttcgt ctatcacggc
     3901 gcggcgatgc gcaatcacaa ccatctcttg ggcgcggttg ccggcgttga tggcatcaag
     3961 accggataca cgcgcgattc cggcttcaat ctcgtgactt cggttcaccg cgacgggcga
     4021 tatctcgttg ccgtcgtcct cggcggccac tcggctttcg cgcgcgacgc gcgcatgcgc
     4081 gagttgatca acagccatat caggcaggcg gcgttgcggc acgcagggcc gcgtgtcgcg
     4141 gaggggtcgg acgagacaga ccgccagccc gagcccttac ctgccgcccc ggccaaggcg
     4201 cgcgtttcgt cgcgccccga cccgacgccg acggcgagcg taagtgcgca tgcgcccgct
     4261 agttccagcg agccgatcca cccggtcatg gtgaaaacca tctcctaccg cactgctccg
     4321 atgccggcgg cagcgctcgc gccgatgccg gcgctggtgc cggtcgccgc gcgtgccgcg
     4381 gcaccgacgc cgcccgctgc agcgccggcc acttcggcct ccatcacgca acccggcgac
     4441 ggatcgcgta ccgttgtcgt cgcatcggcc gagccgggcg agatcgcgat cgccggcaag
     4501 gctgacccgc aaaggactgc cgccaaggct gacatcgcca aggccgacgt tgccaaagcc
     4561 gacatcgcaa aggccgacat cgttaaggcc gacattgcca aggccgacat tgccaagcct
     4621 gaaccagcgc cgccgcaagc gcacggccgc ggcggatggc tgatccagat cggcgcttac
     4681 gacgcagaag cggaggcgcg gcagcatcta agcgcggccc agagtcaggc gcacgcgacg
     4741 ctcgcggcgg ccgaaccgtt taccgagcgc gtgcagaagg gtgacaaggc gctttaccgc
     4801 gcgcgtttcg ccggatttga caggggcgcc gccgaggccg cctgccggga actcaagcgc
     4861 agcgacttcg agtgcatggc ggtcaggaac taagtctccg atcgaacgta gcgcacgccg
     4921 ccgccagcgc aggcaaggcg gaagggagcc gaaacggacg ggaagccacg cgaggatcct
     4981 cttcaggaat ctcagcgatg gcgtcgaagc agaacctcct tggcctgatt gatccgggcc
     5041 gcgagatacg tcgacccccc ttggtcggga tgcagtttct tcatgaggga gcggtgagcg
     5101 cggccgatct cctgcgcgct cgccccgggc tgaaggccaa ggatttgata ggcctcctgt
     5161 tccgtcattt tgccgccgaa cgtcgcgccg ccgccgttcc ccgctgccgc atcgtactgc
     5221 gcgtgttcac gccagccggg ctcccggcga tcaagataag ccatcaatag attgcggctg
     5281 tcgccgtcga tttcgccgat cagaccgatc agcgtggcaa gatcgagcgc atcgagcgcg
     5341 gcgccttgat gccggccggc gagaacgcgg ccatgcatcg cgccgctgtc gtggtcgagt
     5401 tccatttcca gaaacgccgt gcgcacacgc gaggcctggc ccggactctt ctgcgtgcgc
     5461 ccgatgagga tcgccggcca tggcacctgc caaccgagca agccgagacc gaaaactccg
     5521 accgggattg cgacccagat ctgcccgcgc aaaaggagaa aaccggcgag gagcaatgca
     5581 gcgatgcccc ccatcgagcg tatgaggcgc gcggcctgtt tcggatcggc cttggagaag
     5641 gctttgacgg cccacaacag caggacgagg acgacgacgc cgagaagaaa gggcatggct
     5701 atttcagctg ctcgatcagc cggacggcgc cggcgccttg ccgcgcttgg agatcggcaa
     5761 gcgccttcat cccacccgcg gcgtaggctg ccgccgcgcg caaaagttct ccgagttcgt
     5821 gcgcagcccc tggagcgaag cggcagtagg ccccgcgggt gaggcgggca atctcgcgaa
     5881 aggcctgctc gcagaccggg tcgtagccct cctgaaacat gaaagccggg acattacgaa
     5941 cgccgagttc cccggcgccg gcacacaggt cgtcgagtgc ttcctccatg gcatcgccga
     6001 caaagaccaa cgcaccgatc cgggccttgt cgttttcgcg gcgggcatgg gccaggatct
     6061 tcgcgatctg cgtatggccg ccgcggcagt cgatgagcga catcagcgcg ccgagccgtt
     6121 gcggctcggc gatccagggc gtcgtccggc attcggcgag gccccgatag tacacgagct
     6181 ggatgtcgag gccgccgaca gaagctgcct cgcggaacat atcggcctgc agcatgcagg
     6241 cctggtccca tgtcggctgc cggctcatgg tggcatcgag cgcaaatagg aggcgaccac
     6301 gcccgccagt gtcggcaacg ggaccgagag cattcaagtg gctgaggaac gcatcgattt
     6361 ccgcgcgcga agaggcagcc gtcggcgtct gccgaggcgc tgcccgttgg ctgggctcgc
     6421 gggtcgtcgc cgatgcgcgg ccggattggt cgttgctcat cgcctgccct tcgcggcgga
     6481 gattcgtgac ttcacctaag gtggcccccg gcgcgcacgg gcgcaatgct cgctctagat
     6541 ggggagcaag gccgcggccg aggaggcgcg gacgtgcctc ccttgctcaa gtcaatcggc
     6601 aagcagaccg tgggtatcga gcggcttggt ggcggcgacg atccactcgg cgcgcgcggc
     6661 ggcgcggcgc ttgccgcgct cgtcgatcgg cagcttcagc gcatcgacca ggttcctcac
     6721 ctcgtcgcgt gcggtcacgt gcgaagggtt cgggcgctgg ccgagggtgt cctcgttgat
     6781 gtcgtcgagc gccgtcagtc cgcgcggaaa gaactcgcga tagacgacgc gctcggcaaa
     6841 cccgtcgatg gcgcgaaaac cgagttgccg gccgagctca tcgaccccct cgccgacgag
     6901 gcgcttgttg cgcgatccga gcgtcgacag gcggttgcgc acgacgaccc agtcggtgag
     6961 gccgccgtcc accaggcggc gctggcgccg cgcctcgcgc accatctccg cgtaatggcc
     7021 gactccggtc agcacgaagc tcgtcggatc gaccgtgcca agcacgtcga aatcgacgaa
     7081 gctgtcgttg agcggtgtga tcagcgtgtc ggccatcgaa tgcgcgagcc gcatgaggta
     7141 ggaatcggtg cccggcgtat cgatgaccac gaaatcatgg gtgctctcga ccgcgctcac
     7201 cgcctcggcg aaggcgccga attcctgcgc ttcgacctcg tcaaggcgca cgccgcaacc
     7261 gcgtacgacg caataatgcg cggggagatc aagcttgatg cccgcgcgcg ccgcccagtt
     7321 gcggcgattg tcgaggtagt gggtaaagct gcgctggcgg gaatcgagat cgaccgtggc
     7381 gacgcgctgg ccggcctgca gcagcgcgac cgcaacatgc atggccgtgg tcgactttcc
     7441 ggaaccgcct ttttcgttgc caaggacgat gacatgcgcc gataccggcg cgccgacatc
     7501 cgcctgcatc aacatggata cgcaacctca gcgtggcgat ccgttctccg gcttgcaacg
     7561 cttaacgtca agatacagca tcgcccgcga caagttaatc attaactcca tcgcgtccta
     7621 caaatgcatc caatgtgtgc ttggccggca acgccatgag caaaaaattc tcaggatcgc
     7681 agcaccgccc gcgcgtcgtc cgcggtatgc cggcgctaag aaacacgctg gcgcgatggc
     7741 gcgcgcaagg tgaaagagtc gcgctggttc cgaccatggg cgcgctgcac caagggcacc
     7801 ttacattggt gcgcctggcg caacgccgtg ccgaacgcgt catcgtctcg atcttcgtca
     7861 atccggcgca gttcgcgccg cacgaggact tcaagaccta tccgcgcacg ttcgccgccg
     7921 acgtgaaggc gctcgccgca ctcggaaccg atctcgtctg ggcgcccgac gccgcgacca
     7981 tgtatcccgg cgggttcgcc acccaggtcg taccgaaagg tccggccaag gccggcctcg
     8041 aagacgcctc ccggccgcac ttctttgccg gcgtggcgac ggtggtcgca aaacttctca
     8101 tccaatgcgc gcccgacttc gccgtgttcg gcgagaagga ctttcagcag ctcaaggtgg
     8161 tcacgcagct tgcgcgcgac ctcgatcttg ccacccgcat cgtgcccgcg ccgacggtgc
     8221 gcgaagcgga cgggctcgcg ctctcttcgc gcaaccgcta cctctccgcg gccgaacgcg
     8281 aagcagcgcc gacgcttcac cgcgtgctgg ccgattgcgc cgaaaagatc gcggccggtg
     8341 aaccgatcgg tacggttcta ccgaaaggtc gccgcaccat cgagcgcgcg ggcttcatcc
     8401 tcgactacct cgaggcgcgc cacgccgaga ctctcgcgcc agccaactcc aacaaggacg
     8461 ggccgatccg cctgttggtc gccggcaaga tcggcaagac gcggctgatc gacaatgtgg
     8521 gggtctaagt cagcgggaaa ggagcacggg ccgcgcgggc agccttttac gccggctcca
     8581 gatgcggaat ttgcggccgc tcgccgtggg ctttgccgct gatcggcgct ctcggcaagc
     8641 gcgccacgcc tctttccatg accaaggcgt ggtcgagcga gtaccagggc ggggtgacat
     8701 cggcggttcc cgcgcgcggc tcgtcatggc gcacgtaatt gccgatgagg tggcgggtga
     8761 cgccgaactg cacgtcgttg tcgatatgct tgtcgtcggg cgcatagacc tgcgagatca
     8821 gcgtcttgaa gcccggcttg taggcgagga aatgcaggtg cgccggacgc atattgtgcc
     8881 gacgctgcgc gcgcagaaac tcgccgacgg ggccgtcgat cgggatcgga tagccggcgg
     8941 gcttgacgct gcggaaactg atgcggcccc ccacgtcggt gacgaacttg ccgcgcaggt
     9001 tcatttcgga ctgaaccggg tcttggttct cgtagaagcc ctcgggcgac gagtgccaga
     9061 catcgacctc ggcgccctcg atcggcttgc cttcggcgtc acggaaggaa gcttcgacga
     9121 acagagcggg tcccggcgtc ggcgagcgca caatcgaggc gccgtttgcc atcctcggcg
     9181 aattcatgcg ccagaacggt ccgagctggc tggcgtcggt ctcggtctgg ccgcgatcgc
     9241 cgttgttgag caggcagatc aacgccgaaa agccgagcga tccggccatc aacaccgcct
     9301 cgttgtggtt ctcgttggtg tgtttgccga gcgcgacgat gtagccgacc gccgtctgga
     9361 actcctcctc ggtcaacttc acctcgcggg cgaaatcgtg cagatggcgt atgaaggcgg
     9421 acatgatctc gcgaaagcgc gggtccggtg cacggtcgag ctcgctctgc accgccttgg
     9481 taacgtcctg ctcgccgttg atgatcatat cgctcgctct agacgctcgg tatctacctt
     9541 agtccagttc gcgttttgct gtcgatgcgg cggcgccgcg agcgcggcgc cggcttggtc
     9601 cattcctggg acatcccatg tgtcggagcg gcgggcgcgg ctcacatcag gccgagctgg
     9661 ctcaactccc gccgcaactt ctccggcatc gctgccgcgc cgggcgccgc tttggcaaga
     9721 tcgcggggtg cgtcctttgg cgcgaggtag cgccagccct ggaaggcacg aaacgggcgc
     9781 ggcgcaacca agaccacctt cggatcaagc accaggccgc accgtccaat gccgtccttg
     9841 tcgcggaacg gccgcacggc gcggatgcgc tgacggcagg cgatctcgcc acggatcacc
     9901 cagaacagcg aaccgccgtc ggtcaactct gcagcccgct taggcaccat gcgcgtccgg
     9961 tggatgtgct cgggcttttc gccgcgcctg cgcttttcct tgaggcgttg cttgatccag
    10021 tcctggagat cgcggactga atcgcagccg acacaaagct ttatgaggtg gagcggcatg
    10081 gcggtaactt acccttgctc gctccgctcg atcaccacga tttctccgcc ttccacaact
    10141 tgcgcgccgg cgatggcggc aacccgccgg actgttcccg cgaatggcgc gcgcaacgtg
    10201 tgttccatct tcatcgcttc gattaccgcg aggcgttgac cgccggagac caagtcaccg
    10261 acagcgacga aaagctccag caccctgccg tgcatcggcg ccttgacgac gccgtctccc
    10321 ccgcccgcct ccgcggcggc gaccgcaacg tccttgaggc gcagccgcgt ctggcgcccg
    10381 tgacgcagga catagacatc ctgtcccgcc gcaaacgccc ttgcatccgc tgccggcgcg
    10441 gcatcgccca ccatcacatg catgccgtcc ttgccgaacg ctaccgtcgc cgcagccgcg
    10501 tcggcgccga tgaagatcgg gacttcaatc cggcgagtgc cggtgagctg aaagccgtcg
    10561 cgtgcgtccc acggcgaata gggttccgcc gtctccggac ccgatggctc gccggcaagg
    10621 agacgcgcaa caccgagcgc cgcggcggca cggtcgggac cgtgcgggac ggcgccgagc
    10681 gcggcaaggt tgcggtcgat gaaaccggta tcgaccctgc cttcccggaa atcgtgagcg
    10741 cggcagagcg cggcgaggaa ggccacgttg ctgcggacgc cgacgatcgc cgtgtgatcg
    10801 agcgcctcgg cgaggcggtc cagggcggct gtgcgcgttg gcgcgcgcgc aatcaacttt
    10861 gcgatcatcg ggtcgtagaa cggcgtgacc tcgccgccgg cttcgatccc gctgtcgacg
    10921 cggacatcgg tcggcagctc catcgccacg atcggaccgg tggacggcag gaagtcgtgc
    10981 tcgggatcct cggcataaac gcgcgcctcg acggcgtgac cgtcgaagcg gacatccttc
    11041 tgcgtcaacg gcagcgcttc gccggcggcg atcttgaact gccaggcgac gagatcgagg
    11101 ccggttaccg cctcggtcac cgggtgctcg acctggaggc gcgtgttcat ctcgatgaac
    11161 cagatgcggt ccggccgcag tgctttgctg ccgtcggcga cgaactcgac cgtgccggcg
    11221 ccgacatagc cgacagcctt ggcggcctcg acggcggcgg caccgatctg cgcgcgcagg
    11281 ttcgccgtca tgcccggcgc cggcgcttcc tcgatcacct tctggtgccg gcgctgcagc
    11341 gagcaatcgc gctcgccgag atggatgacg ttgccgtgcg tgtcggcaaa gacctgaaac
    11401 tccacgtggc gcggcgcgtt gacgtatttc tcgatcagga cccgaccgga gccgaaggcg
    11461 gcggcaactt cgcgcactgc agcttcgagc gcatcgtcga agtccgcgtg cttgtcgacg
    11521 cggcgcagcc cgcgcccgcc gccgcccgcc gccggcttga tcagcaccgg gtagccgatc
    11581 tcatacgcct tctctttcag gaatttcgcg tcctgccgct ccccgtgata gccgggcacg
    11641 accgggacac ccgctttctc catcagcgcc ttggcgcgat ccttgagccc catggcgcgg
    11701 atcgcggcgg ccggcggccc cacgaaaacg aggtcggcgc gcgcacaggc ttccgcgaaa
    11761 tcggcgttct ccgagagaaa cccgtagccc gggtgaacgc acgcggcgcc gctgcttcgc
    11821 gcggcctcga tcagccgttc aatcgagaga tagctttcgc gcggctctgc cggaccgatg
    11881 caatgcgctt catcgcataa ccgaacatgc agggcgcgcg cgtcggcggc cgagtagacg
    11941 gcgatggtgc gcatgccaag tcgtttggcg gtacgagcga tacggcaggc gatctcgccg
    12001 cgattggcga tgaggaccga gctgaacatg aggcgcgcat cctagagcac gacggtgcac
    12061 cgccgtcatt ggttttcggc gaggatgtct ctcgcggtga agcgcgggat agcgtttgca
    12121 gatctaccgg cgcggctggc gggccgcagg cagaatgcgg tcggatcggt ccttctgctg
    12181 gcgccgctta actcattgcc cgcgcgccgc tgcagcggcg tttgcgtctg gtgccggcgc
    12241 aaacggcaca ggattgacct gcgccggcgg cggcgcggca gccgccgggc cgaccgcggg
    12301 ccgcggcggc agcggctccg gccagatcgg ttcgaccgcc gcttgctggc ccggcgcggc
    12361 cagttgaacg gccgccggtg cgggtggatt ggcggccggt ttgtgcgagc ggcgagacga
    12421 ggccggggct gccgactgcg cgttcggatt ggcggctgcg gcggcggcac ccggcaggac
    12481 cggtcccgtc ggctcggggt tcatgatgtt gactgccgga atcgaggctg cggtcggaaa
    12541 gtcgatgttg acgatcttgc gcgggcccga cgcattcgcc ggcgccgctg gtgctgctgc
    12601 ctggacctgc ggcacttccg cgaccgcagg ctccgacgcc ttggcccaga tcggcagata
    12661 ggactctaaa acacggttga aggttgcctc acttagattg gtgcgcactt gacgcggatc
    12721 gccgagaagg ccgagcgccg tgcaattctc gctcgtgcag ccgtctcgcg ccgccagcac
    12781 gtgggcgaga aagccgaacc ggtctgtctc gagtgcgcga cgcagcagcg gcgcggcgtc
    12841 aatggtcgcg ccattgcgtc cggcataggc ggtgatgtcg gaaaggagcg cgagccgcgc
    12901 ggcgacatag gacgtggcgc tcgccacact ctcgggcgaa gcgaagatcg ccttctcgca
    12961 tgcggtctcg accttctcac cggccagcgc atcgagacag gcaagcggcg agccgggggc
    13021 gagtgtacgc gtggtgagtt cagccacccg cagttcgagc gcgcgccgct cgacgctggc
    13081 attgcccgac ccgccgaagg aagcccacgt aattgccgcg ccaagcgccg cgcccaccgc
    13141 gacaaggatc gcgcgaactg cctccgctgt ccgcgtcgtc ggcagcacga atgtcagccc
    13201 gcagaggaaa accagcaacg ccgccgatcc ggccgtcacc cacaagcgca acgccgaggt
    13261 tccgatctcg gaatcaacgc cgagcataac cccctccacc gacagccggg gttgtcgcat
    13321 tggaccccgg cgggaagtat ggcgcagaca cggcaaggat gccagccggg acacgcgaag
    13381 acacggcgat ccttcgcgac cgaggtgccg ccgacaagat ccgcccgcga tgtctcggtt
    13441 ccccgccgac tttccggcga gattgcggcg cttcaggcgc tcgggagcgg aatcttcggc
    13501 tcagtgctcg agttcgagct ggctctcttt ggccacgcgc tcaaatgctt cgccgggatt
    13561 tttgatccgg tactggtagt cgtcgccatc agagggcagc agcctcacca ccttgtacgt
    13621 cccgctcgcg ccagggcgcg tgatcgggct cgacgtaaac aatacggttt gaccgacccg
    13681 aaacttgtgc gtgctcaaca ccgcggcacg cgcctgaagg tggtgcgtga ccgctgccac
    13741 ggcagcgacc gtaaccgccg cgttcggctc ggcttttgcc gaaacttgac gcgaaacagc
    13801 cttacgaacg acggcatcgc ggccggcggg ccgcctcttc actgaaggtc tattcatgga
    13861 acatcactat atcactcaat gtacgcctgg agcaaaaata tagtacgggc accccggaaa
    13921 tgccacgatc tctcggtcgc acggttgcct tggttgaaat gccttggggt caatggccta
    13981 gcgcgagcaa ttgagcccgg acttgcgggc cggctcaggc ttggcgccgc caggcgccct
    14041 tttcatccgc ctgccaatat gtgacctcga aaccggccgt tttggcctcg ctccagcgcc
    14101 tgcgcgccgc ctccagcgcc tcggcatc
//
LOCUS       DATMQB010000227         4408 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2250953, whole genome shotgun sequence.
ACCESSION   DATMQB010000227 DATMQB010000000
VERSION     DATMQB010000227.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4408)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4408)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4408
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2250953"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..2918)
                     /gene="fdhF"
                     /locus_tag="VNY79_06930"
     CDS             complement(153..2918)
                     /gene="fdhF"
                     /locus_tag="VNY79_06930"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0015942 - formate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HWX72215.1"
                     /translation="MTDPIRFTLDGTEVEAAPGETIWQVADRQGVEIPHLCWLPKPGY
                     RADGNCRACMVEIEGERVLAASCVRKPAPGMKVQTASERARFSRKMVFELLVGDQPSR
                     AAAHDPGSRFWQWADELGVADSRFPRHASPAPDRSHPAMAVQLDACIQCNLCVRACRE
                     VQVNDVIGMAARGYHEKIVFDFDDPMGNSTCVACGECVQACPTGALMPATLVDANGVY
                     TNAPEREVDSVCPYCGVGCQLTYKIKDARIVAVDGRNGPANHNRLCVKGRFGFDYVAH
                     PDRLTEPLIRKDGVSKRDTDIDPANPYTHFRKATWDEALDRAAEGLRRIRDRDGRRAL
                     AGFACAKGTNEEAYLLQKLVRAGFGSNNVDHCTRLCHASSVAALMEGIGSGAVTAPFT
                     AVADADVIIVIGARPTENHPVAATFFKQAAKRGANLIAIDSRNYALMRHATTSLRLNP
                     GRDVALLNALIHAIIEEGLYDRQYVQAHTEDFEKLREHIRDYSPERMAPICGIDAATL
                     REVARAYARAERAIIFWGMGISQHVHGTDNARCLIALALITGQIGRPGTGLHPLRGQN
                     NVQGTSDAGAIPMVYPDYQSVEDPEVRARFEALWHTSLDDRRGLTTVEISDAAHRGEI
                     KGIYIVGENPAMSDPDVEHVREGLARLEHLVVQDIFLTETAKYADVVLPASAWPEKDG
                     TVTNTNRQVQRGRAALPLPGNARQDLWIIQEIARRIGLDWSYAGPADVFAEMKQAMPS
                     LDNITWERVERESSVIYPCDTPDQPGNEIVFGEGFPTASGRGRLVPAAIIPPAEEPDE
                     EYPMVLTTGRQLEHWHTGAITRRASMLDELEPEAVASLAPAELRRLGIAAGDQIRVTT
                     RRGTIELKARADSGVAPGQVFIPFCYAEAAANVLTNPQLDPFGKIPEYKFCAAKVEPA
                     AISVAAE"
     gene            complement(3031..>4408)
                     /locus_tag="VNY79_06935"
     CDS             complement(3031..>4408)
                     /locus_tag="VNY79_06935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008140799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase-F iron-sulfur
                     binding region domain-containing protein"
                     /protein_id="HWX72216.1"
                     /translation="VCDSLSCELAGAARLLDGLRGRLGEGVRVVRAPCMGGCHRAPVV
                     AIGHALHEHATVDNVAAAVSIGEQQHPVIPEFAGLDVYRAAGGYRLLAACLAGERKPE
                     ELIEILEHAGLRGLGGAGFPAGRKWRLVRQEPAPRLLAVNADEGEPGTFKDRYFLETD
                     PHRMIEGMLIAAWMVEAAEIYIYLRDEYPQCRAILESEIAAVEAAGLSGHARIHLRRG
                     AGAYICGEESAMLESIEGKRGLPRQRPPFPAQVGLFGRPTLCNNVETLYWVRDIVEKG
                     VEWFTNQGRNGRKGLRTFSVSGRVRDPGVKLAPAGITARQLIDEFCGGMAEGHVFKGY
                     LPGGASGGILPAALADIPMDFGTLEAEGCFTGSGAVVILSDKDDMKAVALNLLRFFED
                     ESCGQCTPCRAGTEKAVKLMTAPRWDEPLLEELTQVMTDASICGLGQAAMNPVKQVMK
                     HFREDLIT"
BASE COUNT          713 a         1470 c         1461 g          764 t
ORIGIN      
        1 attgcgggcg aagaaaagtt cagcgacgag catgtgctgt tcggccggca gtagacagga
       61 gtacgcgggc gctggcgact cggcgcagcc ggcgagcagc aatagccccg ccagagccgg
      121 catggtccaa tttggccggg ccggggcagc ggctattccg cggccacgct gatcgccgcg
      181 ggttctacct ttgcagcgca gaatttgtat tcggggatct tgccgaacgg gtcgagctgc
      241 gggttggtca gcacattggc ggctgcttcg gcgtagcaga acgggatgaa cacctggccc
      301 ggcgcgacgc cgctgtccgc ccgcgccttc aattcgatcg tgccgcgccg cgtcgtgacg
      361 cgaatctggt cgccggcggc gatgccgagc cggcgcaatt cggccggcgc gaggctcgcg
      421 accgcctcgg gctcgagctc gtcgagcatg ctggcgcgcc gggttatcgc accggtgtgc
      481 caatgctcga gctgccgccc cgtcgtcagc accatcgggt attcctcgtc gggctcctcg
      541 gccggcggga tgatcgcggc ggggaccagg cggccgcgcc ccgatgcagt tggaaaaccc
      601 tcaccaaaaa caatctcgtt gccgggctga tcgggggtgt cgcacgggta gatgaccgag
      661 ctttcgcgct cgacccgctc ccaggtgatg ttgtcgagcg acggcatcgc ctgcttcatc
      721 tcggcgaaca catcggccgg gccggcatac gaccagtcga ggccgatccg ccgcgcgatc
      781 tcctggatga tccacagatc ctggcgcgcg tttccgggca atggcaacgc cgctcggccc
      841 cgctgcactt ggcggttggt gttggtgacg gtgccatcct tctcgggcca ggctgaggcc
      901 ggcagcacga catcggcgta tttcgcagtt tcggtcagga agatgtcctg aacgacgaga
      961 tgttcgagcc tggcgagccc ctcgcgtaca tgctcgacat cggggtccga catcgccggg
     1021 ttttcgccga cgatgtaaat ccccttgatc tcgccgcgat gcgccgcgtc ggagatttcg
     1081 accgtggtca gcccacgcct gtcgtcaagc gaggtatgcc acagcgcctc gaatcgggcg
     1141 cggacctcag ggtcctctac cgattggtaa tcgggataga ccatcgggat cgccccggca
     1201 tccgaggtcc cttgcacgtt gttctggccg cgcagcgggt gcagcccggt gccgggccgg
     1261 ccaatctgcc cggtgatcaa cgccagcgcg atcagacagc gcgcattgtc ggtgccgtgg
     1321 acatgctgcg agatgcccat gccccaaaag atgatcgcac gctcggcgcg ggcgtaggcg
     1381 cgcgcgacct cgcgcagcgt cgcggcatcg ataccgcaga tcggcgccat cctttccggg
     1441 ctgtagtcgc ggatatgctc ccgcagcttt tcgaaatcct cggtgtgggc ctgcacatac
     1501 tgccgatcgt agaggccctc ttctatgatc gcgtggatca gcgcgttgag cagtgccacg
     1561 tcgcgcccag gatttaatcg caacgatgtc gtcgcatgcc gcatcaaggc gtaattgcgc
     1621 gagtcgattg caatgagatt ggcgccgcgc ttcgccgctt gcttgaaaaa ggtcgccgca
     1681 accgggtggt tttcggtcgg ccgggcgcca atgacgatga tgacgtcggc atcggccacg
     1741 gcagtgaacg gcgccgtcac ggcgcccgag ccgatcccct ccatcagcgc cgcgacagac
     1801 gaggcatggc agagccgcgt gcagtggtcg acattgttgc tgccaaagcc ggcgcgaacc
     1861 agcttctgga gcaggtacgc ctcctcgttt gtgcccttgg cgcaggcaaa gccggccagc
     1921 gcgcgtcgtc cgtcacggtc gcggatgcgc ctcaaaccct cggccgcgcg atcgagcgcc
     1981 tcgtcccaag tagccttgcg gaagtgtgtg tagggattgg ccggatcgat gtcggtgtcg
     2041 cgcttcgaga cgccgtcttt gcggatcagc ggctccgtca gccggtccgg gtgtgcgaca
     2101 taatcgaagc cgaaacggcc tttgacgcag agccggttgt ggttcgccgg cccgttccgg
     2161 ccgtcgacgg cgacgatgcg ggcgtccttg attttgtagg tcagctggca gccgaccccg
     2221 caataggggc acacgctgtc gacctcgcgc tcgggcgcgt tcgtgtaaac gccattcgca
     2281 tcgaccaggg tcgccggcat cagcgcaccg gtcgggcagg cctgcacgca ttcgccgcag
     2341 gcaacgcaag tgctgttgcc catcgggtcg tcgaagtcga aaacgatctt ttcgtggtag
     2401 ccgcgcgccg ccatgccgat cacgtcgttg acctggacct cgcggcaggc gcggacgcag
     2461 agattgcatt ggatgcaggc gtcgagctgc accgccatcg ccggatggct gcggtcgggc
     2521 gccggcgacg catgccgcgg aaagcggctg tcggcgacac cgagctcgtc ggcccactgc
     2581 cagaaccgcg aaccgggatc gtgcgcggcc gcccgcgaag gctggtctcc gaccaatagc
     2641 tcgaagacca tcttgcgcga gaagcgggcg cgttcgctcg cggtctgcac cttcatgccg
     2701 ggggccggct tgcgcacgca agaggcagcg agcacccgct ccccctcgat ttcgaccatg
     2761 caggcgcggc aattgccgtc ggcgcgatat ccgggtttcg gcagccagca gagatgcggg
     2821 atctcgacgc cctgtcggtc ggcaacctgc cagatcgtct cgccgggcgc ggcctcgacc
     2881 tcggtcccgt cgagggtaaa gcggattgga tccgtcatcg gacttccctg ttgccgtcac
     2941 ccccgcgcaa gccggggtcc aggaatcccg tgcggtgctc gccgccctgg attcccgctt
     3001 tcgcgggaat gacgaggtga tggtgataac tcaagttatt agatcctcgc ggaaatgttt
     3061 catcacctgt ttgaccgggt tcatcgccgc ctggccgaga ccgcagatcg aagcgtcggt
     3121 catcacctgc gtcagctcct ccagcaaggg ctcatcccag cgcggcgcgg tcatcagctt
     3181 gaccgccttt tcggtgccgg cgcggcatgg cgtgcattgg ccacagctct cgtcctcgaa
     3241 gaagcgcagc aggttcaacg ccaccgcttt catgtcgtcc ttgtcggaga ggatgaccac
     3301 cgcacccgaa ccggtaaagc atccctcagc ttcgagcgtt ccgaaatcca tcgggatgtc
     3361 cgccagcgcg gccggcagga tgccgcccga agcgccgccc ggcagataac ctttgaaaac
     3421 atggccttcg gccatgccgc cgcagaactc gtcgatcagt tggcgcgccg tgatgccggc
     3481 tggggcgagc ttgacccccg gatcacgcac ccggccggag accgagaatg tgcgcaggcc
     3541 cttgcgcccg ttgcggccct gattggtgaa ccactccacg cccttctcga cgatgtcacg
     3601 gacccagtaa agggtctcga cgttgttgca cagggtcggc cggccaaaga gcccgacctg
     3661 cgccgggaag ggcggccgct gccgcggtag gccgcgtttg ccctcgatgc tttcgagcat
     3721 cgccgattct tcgccgcaga tataggcgcc ggcgccgcgg cggaggtgga tgcgcgcgtg
     3781 ccccgatagt ccggcggcct cgaccgcggc gatctcgctt tcgaggatcg cacggcactg
     3841 cggatattcg tcgcgcagat agatgtagat ctcggcggcc tcgaccatcc aggcggcgat
     3901 cagcatgcct tcgatcatgc ggtgcgggtc ggtttcgaga aagtaacggt ccttgaaggt
     3961 gccgggctcg ccctcgtcgg cgttgaccgc caacagccgg ggcgccggtt cctgacgcac
     4021 cagacgccat ttgcgcccgg ccggaaaccc ggcgccgccg agcccgcgca ggcccgcgtg
     4081 ttcgaggatc tcgatcagtt cctcgggctt gcgctccccg gcgaggcagg ccgcaagcag
     4141 gcgatagccg ccggcagcgc gatagacgtc gaggccggca aattccggga tgacagggtg
     4201 ctgctgctcg ccgatggaaa ccgcggcggc gacgttgtcc acggtagcgt gctcgtgcag
     4261 cgcatgcccg atcgctacaa cgggcgcgcg atggcacccg cccatgcagg gggcgcggac
     4321 gacccggacc ccctcgccga gcctgccgcg caaaccatcg agcaaccgcg ccgcaccggc
     4381 cagctcgcag ctcaggctgt cgcacacc
//
LOCUS       DATMQB010000228        14002 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1943238, whole genome shotgun sequence.
ACCESSION   DATMQB010000228 DATMQB010000000
VERSION     DATMQB010000228.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 14002)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14002)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14002
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1943238"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            149..1234
                     /gene="torT"
                     /locus_tag="VNY79_06940"
     CDS             149..1234
                     /gene="torT"
                     /locus_tag="VNY79_06940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012706195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMAO reductase system periplasmic protein TorT"
                     /protein_id="HWX72217.1"
                     /translation="MKRSAVAAGAVAAGAALALAGAGAYGQGKKWYPFSVEEHNPPFD
                     MASPVKEVMYSPLEKAEKKWNICVSFPHMKDAYWLAVDYGVSEEAKDLGVTMHLVEAG
                     GYTNLSKQISQIEDCASNGAQAVDIGAISFDGLNETVRRLKEKNIPVIDVINGMSSKD
                     LSAKSLVSFETMGYKAGEYIAKLHPKGSAEAEVAWFPGPPGAGWVEAGNKGFLDATKD
                     SALKVVATKYGDTGKEVQLKLVEDVLQANPNIKYIAGTSPTTEAAVQLLRERNLSDKV
                     KVIAYYFTPGVYENIKAGRVMAAPTDSAVVQGRVSIDQAVRILEGKPYLKHVGPKIYV
                     IDKSNINSFDYASSLAPADWKPVFSVN"
     gene            1265..2818
                     /locus_tag="VNY79_06945"
     CDS             1265..2818
                     /locus_tag="VNY79_06945"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012706196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HWX72218.1"
                     /translation="MATETLAPAEGVGAGVALPTPILQAQAVSKQFPGVLALDQVDFE
                     LRAGEVHVLFGENGAGKSTLIQMLAGVHAPTAGSLRFRGEPLDLQGVHHARTLGISAV
                     FQEFSLVPTLTVEDNLFLGAELTSRGFIDKSELHRRADDILKRLGFPLRPRQRVQDLS
                     RAEQQIVEIAKAFRTDLSVLILDEPTASLTDREAQRLFAMIEQAKSRGVGVVYVTHRM
                     NEISHIGDRVTVLRDGKRVATLDVAEADDERLLQLMTGRVISQVFPQIAYRPGRPLLE
                     VSGLTTADHLVRGLSLTVRAGEVVGLAGLVGSGKSVVGRACFGLERLASGRVMFDGRD
                     VTGRSAREMLDRGAFYLPPDRREEGLVMMRSVRENVALPWLGARPFTRFGFLDRGSER
                     GKVRDVADRLNLQPRNIEHDLERLSGGNQQKVLLAKGLVSAVKLFILDEPTVGVDVGT
                     RVAIYGFIRDLCESGAGVLLISSDLPEILHLTNRTYVMYRGDLRAELAGEEITQDRVL
                     ANFFERTRA"
     gene            2818..3837
                     /locus_tag="VNY79_06950"
     CDS             2818..3837
                     /locus_tag="VNY79_06950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009467731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX72219.1"
                     /translation="MDQKVAQRWLDYSVPLQRLFVRIGVLPFLLVIALIVFNALSPRF
                     LTSENLITVARQATYLAIVAMGQMLALLTGGFDLSVGKIVAITSVMTALTMAPLHAAH
                     PDATAITLTLGILAGIGAGTFVGVVNGVGVAVFNVSPFMMTLGTATISFGIALTLTSG
                     VPVYGLPDAFGTIFNFSRILDIPSPVYVTAGLFVAMYILLNWTRMGRYFYAVGGNLKA
                     SRLSGINTRFYLFMAYVLCGALAAVAGALLTARLETGEANIGASMPLDSIAACVIGGV
                     SLRGGIGSVGNVVLGAIFIGLIQNGMDLAQIQSYLQEVVIGVLLILAVIADQLRQFVM
                     LRLKD"
     gene            3882..4181
                     /locus_tag="VNY79_06955"
     CDS             3882..4181
                     /locus_tag="VNY79_06955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019170931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HWX72220.1"
                     /translation="MSDNRAVPTVQLENEHLRVTEWRFAPGAATGWHRHPHDYVVVPV
                     VDGELELVGPDGGRSRAQLHKGQSYFRKAGVEHDVINAGAEIMTFVEVELKDTGG"
     gene            4238..4987
                     /gene="pxpA"
                     /locus_tag="VNY79_06960"
     CDS             4238..4987
                     /gene="pxpA"
                     /locus_tag="VNY79_06960"
                     /EC_number="3.5.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020628980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-oxoprolinase subunit PxpA"
                     /protein_id="HWX72221.1"
                     /translation="MSAAKGNAIKLAINCDMGESFGLYKIGDDEGMMPHITIANVACG
                     FHASDPTVMAHTVRLAKRHHVRVGAHPSLPDLQGFGRREMKMRPEELTDCIVYQVGAL
                     KGFLEREGMDLFHVKPHGSLYGMAAKSQEVAKAVADAAKVFNVPVLGMAGTLHEQIYT
                     AAGLEFISEYYADLDYADDGTLIITREHHAVDPKRAAEGALRAVKEGVAKSVNGNKVH
                     VRADCICVHSDTPNAVEVAQAVKAAVAEYLG"
     gene            5018..5263
                     /locus_tag="VNY79_06965"
     CDS             5018..5263
                     /locus_tag="VNY79_06965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase"
                     /protein_id="HWX72222.1"
                     /translation="MAQHEVLSPLPGIFYRRPAPEKPPYKQDGDRVAEGDVIGLVEVM
                     KQFTEVHADASGKIVRFLIDNEAAVEPGQAVLLIDTA"
     gene            5273..6619
                     /locus_tag="VNY79_06970"
     CDS             5273..6619
                     /locus_tag="VNY79_06970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016874 - ligase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HWX72223.1"
                     /translation="MFDKLLVANRGEIAVRVIRAAKELGLRTVAVFSEADRESLAVRF
                     ADEAVCIGPPAAAKSYLNADAIIAAAGETGAGAIHPGYGFLSENAKFAAAVAAAGLVF
                     VGPAPETIRTMGDKAAARAAAQAAGVPIVPGSDGEVADLDHALAAARHIGYPVMLKAS
                     AGGGGRGIRVADDEAGLARHFPTAQAEAAAAFGSGALYLERFLKRARHLEVQVLGDGE
                     RVVHCFERECSLQRRRQKVWEEAPSPAIDETTRQALCASAVRLAERARYRGAGTLEYL
                     YDDDTGEFFFIEMNTRIQVEHPVTEMVCGLDLVREMILVAQGQKLSLAQPEVTMRGAA
                     IEVRINAEDPDKNFRPSPGRVAALTLPAGPGVRVDTMLYPGYAVPPYYDSLLAKIIVH
                     AETRDLALARLRRALDEFAIEGIVTTAALHKRLARLTEVQAARFDTGFLERLLAAT"
     gene            6684..7562
                     /locus_tag="VNY79_06975"
     CDS             6684..7562
                     /locus_tag="VNY79_06975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012649330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="allophanate hydrolase subunit 1"
                     /protein_id="HWX72224.1"
                     /translation="MSAIRYSFGGDEHVFAEIGEEMSLEAFFKGMAICTELEKRRIAG
                     VSEICPSNASYLVRFDPDVVHPDKMLSTLKEIEAEIGDAELELPTRIVEIPVLYNDPW
                     TRETLMRFRERHQDPNSTDIEYGARINGYRSVDEFIAAHSGAPWFVSMLGFVAGLPFL
                     FQMVEREKQIEVPKYLRPRTDTPKLTVGHGGCFTAIYSVRGAGGYQLFGITPAPIYDP
                     AQGLPYLKDFMVFFRPGDIVKWKPITREEYDRDVKAVEAGTFDLTVRPLTFSLKAFHA
                     DPGGYSRHLVEVLHGH"
     gene            7552..8526
                     /locus_tag="VNY79_06980"
     CDS             7552..8526
                     /locus_tag="VNY79_06980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018245289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin-dependent carboxyltransferase family
                     protein"
                     /protein_id="HWX72225.1"
                     /translation="MAIEVIKPGLATSVQDAGRPGYYNIGIPISGGLDQYSLRAANLL
                     VGNDEGAAVLEATLLGPELLFRQAAIVAVTGAEAAPKLNGKPQPRNESFAVRADDRLG
                     FDFMRAGARIYIAIAGGIDVPPVLGSRSTYALGALGGFAGRKLAAGDVLSTGAAKPSA
                     RAGRALAADLVPAYPKSLELRVLPGLYFHRITDESAKSFFEDTWTVAPEADRIGYRFR
                     KGRPLVFRERKQPFGAGSDQSNIVDAGYPYGSIQVPGGLEPIILHRDAVSGGGYAMIG
                     TVISADMDRIAQMQPNNLARFVEVNMDGALKARAEYKSRVARLTASLR"
     gene            complement(8638..9243)
                     /locus_tag="VNY79_06985"
     CDS             complement(8638..9243)
                     /locus_tag="VNY79_06985"
                     /EC_number="3.1.3.-"
                     /inference="COORDINATES: protein motif:HMM:NF012521.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HWX72226.1"
                     /translation="MTILVVRHGETDGNAARILQRPDVPLNQRGMRQAEQLAQRLFAH
                     GFVHILCSDFLRARMTAVPLAACSGITIEESSLLQERNFGDLRGVPYVELTEDPFGPD
                     FVPPNGEDWPRFHARVAEAFAFIVSRRRAVNGTLVVVTHGLVCRALVERHALVPEGIS
                     VPATFDNTSVTGLHENAPHAVTLINCTRHLVTSLEISGAPA"
     gene            complement(9472..9687)
                     /locus_tag="VNY79_06990"
     CDS             complement(9472..9687)
                     /locus_tag="VNY79_06990"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72227.1"
                     /translation="MSEREGRKFFFLLQAILAALFLIVGVALAIEAASGGYGIGLVIV
                     AVMANGPGLVFFILAAMSAATAMHLRP"
     gene            complement(10024..10515)
                     /locus_tag="VNY79_06995"
     CDS             complement(10024..10515)
                     /locus_tag="VNY79_06995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HWX72228.1"
                     /translation="MLSIAKGLAGFTVAAVLSSPVGAQGIVLQKNITLALAQTIANAA
                     ITRCRSLGYNVSVTIVDRAGLPIVMLRDDGAGLHTPEGSDRKAYTARAFGQPSAAFAR
                     RLQDRPETVGSRHYSRVLALDGGLPIKVGDEIVGAVGVSGTPGKDDDCAQAGIDKVAD
                     QLK"
     gene            10846..11202
                     /locus_tag="VNY79_07000"
                     /pseudo
     CDS             10846..11202
                     /locus_tag="VNY79_07000"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
     gene            11570..12190
                     /locus_tag="VNY79_07005"
     CDS             11570..12190
                     /locus_tag="VNY79_07005"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HWX72229.1"
                     /translation="MSLDAWVSDMETVADAAGLHRFPLLGFSQGCPVAIAYAVRHPER
                     VSHLILYGGFATGANKRSTLTAAGRERLAAMNTLVKQGWGADNPAFRQMFTSLLMPTA
                     NKDQTDAFNGLQRLSASPECAARYLETVGDLTVLELLSQVKAPTIVMHVRDDSLVPST
                     LGRELAAGIPGARFVALPGKNHIPLEQDPSVPRLFEELKDFLRNVS"
     gene            complement(12423..13184)
                     /locus_tag="VNY79_07010"
     CDS             complement(12423..13184)
                     /locus_tag="VNY79_07010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX72230.1"
                     /translation="MNLHAIAAIYRYEMARTRRTMLQSIVSPVISTSLYFVVFGAAIG
                     SRISEIEGVSYGAFIVPGLMMLMLLTQSIMNASFGIYFPRFVGTIYEILSAPVSYVEI
                     LIGYVGAATTKSIILGLIILGTSALFVPLRIAHPVWMLAFLVLTSVSFSLFGFILGVW
                     ADGFEKLQIVPMLIITPLTFLGGTFYSTSLLPPFWRTVTLFNPLVYLISGFRWSFFEL
                     ADVHFGISVAITVLFLAACLVAISWIFKTGYRLKT"
     gene            complement(13181..>14002)
                     /locus_tag="VNY79_07015"
     CDS             complement(13181..>14002)
                     /locus_tag="VNY79_07015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018428632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX72231.1"
                     /translation="LLGPNGAGKTTLISVICGIVNPTAGKIAVEGHDIITDYRAARSL
                     IGLVPQEITTDAFTSPWSTTSFSRGLFGKPANAAYLEKILRELSLWDKRNDKIMTLSG
                     GMKRRLMIAKALSHEPRILFLDEPTAGVDVELRKDMWEMVRGLRAEGMTIILTTHYIE
                     EAELMADRVGVINKGELILVENKTELMRKLGRKRLTLELREPLAAVPPALARHALTLA
                     DAGRKLVYNYDTGSGETGITELIDDLHLAGLRIKDLHTTETSLEDIFVGLLRKNR"
BASE COUNT         2519 a         4458 c         4533 g         2492 t
ORIGIN      
        1 cgcctagccg tttttctcct ctgccggcgc gcaattgaca ttgcgaaaag tccggtagga
       61 taatgacttc tcggcgggga tgcgctccag gcgcgccgca ttgacagggc cgcacgggcc
      121 ttgccgccgg caacacagga gggcggaaat gaagcgatca gcggtcgctg cgggagcagt
      181 tgcggcagga gccgcgctgg cgctcgcggg cgcgggtgcc tacggacagg gcaagaaatg
      241 gtacccattc tccgtcgagg agcacaatcc ccccttcgac atggcgagcc cggtcaagga
      301 ggtgatgtac agcccgctcg agaaggctga gaagaaatgg aacatctgcg tttcatttcc
      361 gcacatgaag gacgcctact ggctcgcggt cgactacggt gtgtcggagg aggcgaagga
      421 tctcggcgtc accatgcatc tcgtcgaggc cggcggttac accaatctga gcaaacagat
      481 atcgcagatc gaggactgcg cgtcgaacgg cgcccaggcg gtcgacatcg gcgcgatctc
      541 ctttgacggg ctcaacgaga cggtgaggcg cctcaaggag aagaacattc cggtgatcga
      601 cgtgatcaac ggcatgtcgt ccaaggacct ctcggcgaag tcgctcgtgt cgttcgagac
      661 gatgggctac aaggccggcg agtacatcgc caagctgcat ccgaagggtt cggccgaggc
      721 cgaagtagcc tggttcccgg gcccgcccgg cgccggctgg gtcgaggccg gcaacaaggg
      781 cttcctcgac gccaccaagg acagcgcgct caaggtcgtc gccaccaaat acggcgatac
      841 cggcaaggaa gtgcagctca agctggtcga ggacgtgctg caggccaacc cgaacatcaa
      901 atacatcgcc ggcacgtcgc cgaccacgga agccgccgtg cagcttctgc gcgagcgcaa
      961 tctgtcggac aaggtcaagg tcatcgccta ttacttcacg cccggcgtct acgagaacat
     1021 caaggccggg cgggtgatgg cggcaccgac ggattccgcc gtggtgcagg gccgggtctc
     1081 gatcgaccag gcggtgcgca tcctcgaagg caagccctat ctcaagcacg tcgggccgaa
     1141 gatctacgtg atcgacaagt cgaacatcaa ttcgttcgac tacgcctcgt cgctcgcgcc
     1201 ggcggattgg aagcctgtct tctccgtcaa ctgacgtccg acgggtgggg acgttgatgg
     1261 tgtgatggcg acggagacat tggcgccggc agaaggcgtg ggcgcggggg tggccctgcc
     1321 cacgccgatt ttgcaggccc aagccgtatc caagcagttc cccggcgtat tggcgctcga
     1381 ccaggtggat ttcgagctgc gcgccgggga ggtgcatgtc cttttcggcg agaacggcgc
     1441 cggcaaatca accctgatcc agatgctcgc cggcgtgcac gctccgaccg ccggcagcct
     1501 ccgctttcgc ggcgaaccgc tcgaccttca gggcgtccat cacgcccgca cgctcggcat
     1561 cagcgccgtg ttccaggaat tctcgctggt gccgacgctc accgtcgagg acaatctgtt
     1621 tctcggcgcc gagctgacga gccgcggctt catcgacaag tcggagctgc atcgccgcgc
     1681 cgacgacatc ctcaagcggc tcggcttccc gttgcggccg cgccagcgag tccaggacct
     1741 cagccgcgcc gagcagcaga tagtcgagat cgccaaggcg ttccgcaccg acctctcggt
     1801 gctgatcctc gacgaaccga cggcctcgct caccgatcgg gaagcgcagc gcctgttcgc
     1861 gatgatcgag caggcgaagt cgaggggcgt cggcgtcgtc tatgtcacgc accggatgaa
     1921 cgaaatcagc cacatcggcg atcgggtcac ggtgctgcgc gacggcaaac gcgttgcgac
     1981 gctcgacgtc gccgaggccg acgacgagcg tctgctgcag ctcatgaccg gacgcgtcat
     2041 cagccaggtc tttccccaga tcgcatatcg gccggggcgg ccgctgctcg aagtatcggg
     2101 gcttaccacc gccgaccatc tggtccgcgg cctttcgctc acggtacgcg ccggcgaggt
     2161 cgtcgggctc gccggcctgg tcggcagcgg caagtcggtg gtcgggcgcg cctgcttcgg
     2221 cctggagcgg ctcgcctccg gccgtgtcat gttcgacggc cgcgacgtca ccggacgctc
     2281 ggcgcgcgaa atgctcgacc gcggcgcttt ctatctgccg ccggaccggc gcgaggaagg
     2341 gctggtgatg atgcgcagcg tccgcgagaa cgttgcgctg ccctggctcg gggcgcgccc
     2401 gttcacccgt ttcggcttcc tcgaccgcgg cagcgagcgt ggcaaggttc gcgatgtcgc
     2461 cgaccgcctc aatttgcagc cgcgcaacat cgagcacgat ctcgagcggt tgtccggtgg
     2521 caatcagcag aaggtcctgc tggccaaggg actggtctcg gcggtgaagt tgttcatcct
     2581 cgacgagccg accgtgggcg tcgacgtcgg cacgcgcgtc gccatctacg gcttcattcg
     2641 agatctctgc gagagcggcg ccggcgtgct gctgatctcg tcggatctgc cggaaatcct
     2701 ccacctcacc aaccgcacct acgtgatgta ccggggcgac ctgcgggccg agcttgccgg
     2761 cgaggagatc acgcaggacc gcgtgctggc caatttcttc gaacggacgc gcgcctgatg
     2821 gaccagaaag tcgcgcagcg ctggttggac tacagcgtgc cgctgcagcg gctgttcgtg
     2881 cgcatcggcg tcctgccgtt cctcctggtc atcgcgctga tcgtcttcaa cgccctgtcg
     2941 ccgcgcttcc tgaccagcga aaacctgatc acggtcgccc ggcaggcgac ctatctcgcc
     3001 atcgtcgcca tgggacagat gctggcgctg ctcaccggcg gcttcgatct ctcggtcggc
     3061 aagatcgtcg ccatcacctc ggtgatgact gcgctgacca tggcgccgct ccacgccgcc
     3121 caccctgacg caaccgcgat caccctgacc ttgggaatcc tcgccggcat cggcgccggc
     3181 accttcgtcg gcgtcgtcaa cggcgtcggc gtcgcggtgt tcaacgtctc gccgttcatg
     3241 atgacgctgg gcaccgcgac catcagcttc ggcattgcct tgaccttgac cagcggcgtt
     3301 ccggtctacg gccttcccga cgccttcggc acgatcttca acttctcgcg catcctcgac
     3361 attccttcgc cggtctacgt gaccgcgggg ctgttcgtcg ccatgtacat cctgctgaat
     3421 tggacacgca tgggacgcta cttctacgcg gtcggcggca acctcaaggc ctcgcggctc
     3481 tccggcatca acacccggtt ctacctcttc atggcctatg tgctgtgcgg ggcgctggcc
     3541 gcggtcgcgg gtgcgctcct caccgcgcgg ctcgaaaccg gcgaagccaa tatcggcgcc
     3601 tcgatgccgc tcgactcgat tgcggcgtgc gtcatcggcg gagtgagcct gcgcggcggc
     3661 atcggcagcg tcggcaatgt cgtgctcggc gccatcttca tcgggctcat tcagaacgga
     3721 atggacctgg cgcagatcca gtcctacctg caggaggtgg tgatcggtgt cctgctcatt
     3781 ctcgcggtca tcgccgatca gcttcgccag ttcgtgatgc tgcggctcaa ggattgagct
     3841 agattggtcc agacggtgag tgacagcgca gcgaggacga gatgagcgac aaccgggcgg
     3901 ttccgaccgt gcagctcgag aacgagcatc tgcgggtgac cgagtggcgt ttcgcgccgg
     3961 gcgccgcgac cggctggcac cgccatcccc acgactacgt cgtggtgccg gtcgtcgacg
     4021 gcgagctgga actggtaggc ccggacggcg gccgctcgcg ggcgcagctg cacaagggcc
     4081 aatcgtactt ccgcaaggcc ggcgtcgagc acgatgtcat taacgccggc gccgaaatca
     4141 tgaccttcgt cgaggtcgag ctcaaggata ccggtggcta gggaaattcg cggtcacgtt
     4201 cagtccggga gtctcgtgga agtgaggagg tgagccaatg tcggcagcca agggaaacgc
     4261 gatcaagctc gcgatcaact gcgacatggg cgagagtttt ggcctctaca agatcggcga
     4321 cgacgaaggc atgatgccgc atatcactat cgccaacgtc gcctgcggct ttcatgcctc
     4381 cgatccgacg gtgatggccc acacggtgcg gctggcgaag cggcaccacg tcagggtcgg
     4441 cgcgcatccc tcgctgcccg atcttcaggg tttcggccgg cgcgagatga agatgcggcc
     4501 cgaggagctg accgattgca tcgtctatca ggtcggcgcg ctcaagggct ttctcgaacg
     4561 tgagggcatg gacctattcc acgtcaagcc gcacggttcg ctctatggca tggcggcaaa
     4621 atcgcaggag gtggccaagg cggtcgccga cgctgccaag gtgttcaacg tgccggtgct
     4681 gggcatggct ggcaccttgc acgagcagat ctacaccgcc gctgggctgg aattcatttc
     4741 cgagtactat gccgatctcg actatgccga tgacggcacg ctgatcatca cccgcgagca
     4801 tcacgcggtc gatccgaagc gcgccgccga aggtgccctt cgcgccgtga aagagggcgt
     4861 ggccaaatcg gtcaacggca acaaggttca cgtccgagcc gactgcatct gcgtccactc
     4921 cgatacgccg aatgcggtcg aggtggcgca agcggtcaag gcggcggtcg cggaatatct
     4981 tggatagccg cgcgcttttt cagaaggggg tttaaggatg gcgcagcatg aggtcttgag
     5041 tccgctgccg ggaattttct accggcggcc ggcgccggaa aagccgccct acaagcagga
     5101 cggcgatcgc gtcgccgaag gcgacgtcat cggcctggtc gaggtgatga agcaattcac
     5161 cgaggtccat gccgacgcca gcggcaagat cgtgcgcttc ctcatcgaca atgaggcggc
     5221 ggtcgagccg gggcaggccg tgctgctcat cgacaccgcc tgagcctcac gcgtgttcga
     5281 caagctcctg gtcgccaatc gcggtgagat cgcggtgcgc gtcattcgcg cggcgaagga
     5341 gcttgggctg cgcacggtcg cggtgttcag cgaggccgac agggagagcc ttgcggtgcg
     5401 ctttgccgac gaggcggttt gtatcggtcc gccggcggcg gcgaagagct atctcaacgc
     5461 cgacgcgatc atcgccgccg ccggcgagac cggcgccggc gccatccatc ccggctacgg
     5521 ctttctatcc gagaacgcca agtttgccgc agcggtggcc gcggccggcc tcgtcttcgt
     5581 cggccccgcg ccggaaacga tccgcaccat gggcgacaag gcggcggcgc gggcggcggc
     5641 gcaggccgcc ggcgttccga tcgtgccggg gagcgacggc gaagtcgccg acctcgacca
     5701 tgcgctggcc gcggcgcggc acatcggcta cccggtcatg ctcaaggcga gcgccggcgg
     5761 cggcggtcgc ggcatccgcg tcgccgacga cgaggcgggg ctggctcggc attttccgac
     5821 ggcgcaggcc gaggcggcgg ccgcgttcgg cagcggcgcc ctctatctcg aacgtttcct
     5881 caagcgcgcg cgccacctcg aagtgcaggt gctgggcgac ggcgaacgcg tcgtgcactg
     5941 cttcgagcgc gaatgctcgc tgcagcggcg gcggcagaag gtctgggagg aggcgccgtc
     6001 gccggcgatc gacgagacca cgcggcaggc gctgtgcgct tcggcggtgc gccttgccga
     6061 gcgagcccgc taccgcggcg ccggcacgct cgaatatctc tacgacgacg acaccggcga
     6121 atttttcttc atcgagatga acacgcgcat ccaggtcgag catccggtca ccgagatggt
     6181 ctgcggcctc gatctcgtgc gcgagatgat cctggtggcc cagggacaga agctctcgct
     6241 ggcgcagccg gaagtgacca tgcgcggggc ggccatcgag gtgcggatca atgccgagga
     6301 tcccgacaag aactttcgcc cgtcgcccgg ccgcgtggct gcgctgacgc tgcccgccgg
     6361 tcccggggtc cgcgtcgata ccatgctcta tccgggctac gccgtgccgc cctactacga
     6421 ctccctgctt gccaagatca tcgtccacgc ggaaactcgg gacctggcgc tggcgcggct
     6481 gcgccgtgcg ctcgacgagt tcgccatcga ggggattgtc actaccgcag cgctgcacaa
     6541 gcgtcttgcc cggctgaccg aagtgcaggc ggcgcggttc gataccggat ttttggagcg
     6601 gctgctggcg gcaacctgag ccgtcagggt cgcctcactc gcggggaagc tggaactgtg
     6661 aaggcaccgg accggagata cgcatgagcg caatccgtta ttccttcggc ggcgacgagc
     6721 atgtcttcgc cgagatcggc gaggagatgt cgcttgaggc attcttcaag ggcatggcga
     6781 tctgcaccga attggagaag cgccgcatcg ccggagtgtc ggagatctgt ccgtcgaacg
     6841 cctcctacct ggtgcggttc gatcccgacg tcgtccatcc cgacaagatg ctgagcacgc
     6901 tcaaggagat cgaggcggag atcggcgacg ccgagcttga actgccgacg cgcatcgtcg
     6961 agatcccggt gctctacaac gatccgtgga cgcgcgagac gctgatgcgc tttcgcgaac
     7021 gccatcagga ccccaacagc accgacatcg agtatggcgc ccgcatcaac ggctaccgct
     7081 cggtcgacga attcatcgct gcgcactccg gtgcgccgtg gttcgtctcc atgctcggct
     7141 tcgtcgccgg gctcccgttc ctgtttcaga tggtcgagcg cgaaaagcag atcgaggtgc
     7201 cgaagtatct gcggccgcgt accgatacgc cgaagctgac cgtcggccac ggcggctgct
     7261 tcaccgccat ctactcggtg cgcggcgccg gcggctatca gctgttcggc atcaccccgg
     7321 cgccgatcta cgacccggcg caggggctgc cgtatctcaa ggacttcatg gtgttcttcc
     7381 gccccggcga catcgtcaaa tggaagccga tcacgcgcga ggaatatgac cgcgacgtca
     7441 aagcggttga ggccggcacc ttcgacctga ccgttcggcc gctgacgttc tcgctcaagg
     7501 cgtttcatgc cgatcccggc ggctacagcc ggcatctcgt ggaggtgctc catggccatt
     7561 gaggtgatca agccgggcct cgccaccagc gtgcaggacg ccggccggcc cggctattat
     7621 aacatcggca ttccgatctc gggcgggctc gatcagtaca gcctgcgcgc ggccaatctc
     7681 ctggtcggca atgacgaagg cgcggcggtg ctggaagcga ccctgctcgg gcccgagctt
     7741 ctcttccgcc aggccgcgat tgtcgccgtc accggggcgg aagcggcgcc gaagctcaac
     7801 ggcaagccgc agccgcgcaa cgaatccttc gcggtgcgcg cggacgatcg gctgggcttc
     7861 gatttcatga gggcgggcgc gcgcatctac atcgccatcg ccggcgggat cgacgtgccg
     7921 ccggtcctgg gcagccgctc gacttatgcg ctcggtgctc tcggcggctt cgccggtcgg
     7981 aaactcgcgg ccggcgacgt gctctcgacc ggcgctgcga aaccgagtgc ccgcgccggc
     8041 cgcgcgctcg ccgccgacct ggtcccggcc tatccgaaat cgctcgaact gcgcgtgctg
     8101 cccggccttt acttccatcg catcaccgat gaatcggcga agtcgttctt cgaggacacc
     8161 tggacggtcg caccggaggc ggaccgcatc ggctatcgct tccgcaaggg gcggccgctg
     8221 gtcttccgcg agcgcaagca gccgttcggc gccggctccg atcaatcgaa catcgtcgat
     8281 gccggctatc cttacggctc gatccaggtg cccggcggcc ttgagccgat catcctgcat
     8341 cgcgacgccg tctccggcgg cggctacgcc atgatcggca cggtgatcag cgccgacatg
     8401 gaccgcatcg cgcagatgca gcccaacaat ctggcgcggt tcgtcgaggt gaacatggac
     8461 ggcgcgctca aggcgcgggc cgagtacaag agccgggtgg cgcggctgac ggcgtcgctg
     8521 cgctaggcca tgtactcatg catcgacccg cgaccggcgc aggcctcgta atgtccgcaa
     8581 tagctgcaaa taagcggaga tcaatttagg tctgctttgc gccaatttca gacatcccta
     8641 ggctggggct ccggaaattt cgagcgatgt cacaagatgc cgagtgcaat tgatcaaggt
     8701 caccgcgtgc ggcgcatttt catgtaaccc ggttacgctc gtgttgtcga aagtcgccgg
     8761 aacggaaatg ccttcgggta ccagcgcatg ccgttcgacc aaggctcggc agactaagcc
     8821 atgggtgacc accaccagcg tgccgttcac ggcgcgacgg cggctcacga tgaaggcgaa
     8881 tgcctcagca acgcgcgcgt gaaatctcgg ccagtcttca ccgttcggcg gcacgaagtc
     8941 gggtccaaag gggtcttcag tcaattcgac atatggcacc ccgcgcaggt cgccaaagtt
     9001 gcgctcctgt aatagtgagc tctcttcaat cgtaatcccc gaacaagcag cgagcggcac
     9061 cgccgtcata cgcgcgcgca aaaaatcgct gcacaagatg tgaacgaaac cgtgagcgaa
     9121 caggcgctgc gcgagctgtt ccgcttgacg catcccgcgc tggttaagcg gaacgtcagg
     9181 gcgctgcaga atgcgcgctg cattgccatc agtctcgcca tgacgcacga ccaagattgt
     9241 catgtcacct agttagcagc gttcgcgtgt cgcggcgagc cccgaaactg aagcaggagc
     9301 ggtagaggaa acccggctgc ttcgataggc acttctgctg tgggtcactt cgacgcttga
     9361 gcggtttccg cgcaatgtcc gctcttcacc tcagagcgtc cgagtagcgg ctattcggga
     9421 ttcgcctttg tgcgaattgg agacatcatg ccgtgtcccg ggtcacgggc ttcacggccg
     9481 caaatgcatc gctgtcgcag cggacatcgc cgccaaaata aagaacacta agccgggccc
     9541 attggccatc accgcaacaa tgacgagccc tatgccgtac ccaccggacg cagcttcgat
     9601 ggcaagggcg acgccaacga tgaggaacaa cgccgctagg atcgcctgaa gcaaaaaaaa
     9661 gaacttgcgt ccttcacgct ctgacatttg tgcagccccc gaaagaaccc gacccgccga
     9721 cggtcggggg gcatgatcca aggctatcgc ctagcgggca aggggttccc cccaaaggct
     9781 caaggcgacg tcagccagcc tgttcaactg aagagcaaag caaaaaattc agactgacgg
     9841 aatggggtgc gagttgtatc ggctactttg ccgccgccgt cggctatggg tcattctctt
     9901 ccaattgcga ctacgagcgg cacggccgct tagctctcaa aagcggaagt cagagcgagc
     9961 gtgcgaagtc gacccttcgc gccattcttg gaaatggcca gttgccgccc gtcttttgcg
    10021 ccgtcacttc aattgatcgg caaccttgtc gatgccggcc tgcgcgcaat cgtcgtcctt
    10081 gcccggcgtc ccagagacgc cgaccgcgcc gacgatttcg tcacccactt tgatcggtaa
    10141 tccgccatcg agtgccagaa cgcgcgaata gtgccgcgag ccgaccgtct ccggcctgtc
    10201 ctgcagccgc cgagcgaagg ccgccgaagg ctggccgaag gcgcgtgccg tgtaggcttt
    10261 gcggtcgctt ccctcgggcg tatgcaatcc agcgccatcg tcgcgcagca tgacaatcgg
    10321 cagccccgcg cgatcgacga tcgttaccga gacattgtat cccaagcttc ggcatcgcgt
    10381 gatcgccgca ttggcgatgg tctgcgccag cgccagcgtt atatttttct gcaagacgat
    10441 gccttgtgcg ccgaccggcg atgacaagac agcagcgacg gtgaagccgg caagaccttt
    10501 ggcaatcgac aacatgagac aggctccctg ctacttcgtg gatcgcgcag ccaatataac
    10561 gccgccggca gcttgctgca ttcgtgataa tgcgccgttc ccttgtagct cgacccgcgg
    10621 ccgtgcaggc tacgcgatgt ccgctactcc tcctccaaca agggcgagag agcggagatc
    10681 aatttaggtc tctttgtgcc gtaagcggct ccgcacccct ggtcagggca agccggaatg
    10741 cctaagtttt tccttcggcg cgtggagctc agcttggaaa agccgcgagt tgaaagacac
    10801 cttgcggcca ttcttgccgc cgatgtcgct ggatacagtc ggctgatggg cgccgacgag
    10861 gtcggtacgc tcgcccggtt gaggacccac cggggcgagc tcttggaccc tgcgatcgag
    10921 atccatcgcg gccacatcgc caacaccgct ggggacagta tccttgctga atttggcagc
    10981 gtcgtggacg ccgtctcttg tgccgtcgag attcagcgca gcatgctcga acgcaattcg
    11041 gagacaccgc cggaccagcg catcgaattc cgcatcggca taaatctcgg cgacgtcgtt
    11101 tcggagggca ccgacatctt cggcgacgga gtcaatgtcg cggctcggct cgaaagcctt
    11161 gccgatcgcg gcggcatctg catttcgcgc caagtgctcg atcaggtcga gggcaagctt
    11221 gatgtgacct atcgcgaact cggccgacag aacctcaaga acatcgcgaa gccggtggag
    11281 gttttcgcaa tccatctcga tgccgccgca tcgccgggct cccggttcct cgccacggcg
    11341 aacctcaagc aggaaatacg ctattgcaag gcgcccgacg gtgtccggct ggcatacgcg
    11401 accgtgggca gcggaccgcc gatgttgaag tcggcgcact ggcttggcca tcttgaatac
    11461 gactgggaat tgccgatcgc ccggcatttg ctacttggac ttgccaagga tcacacactg
    11521 ataatacgac gcccgcggca acggcctgtc ggattgggac gtacacgaga tttctctcga
    11581 tgcctgggta agcgacatgg aaacggtcgc cgatgccgcc gggctccatc gttttccact
    11641 tctcgggttc tcgcagggtt gcccggtggc gattgcctat gcggtccggc atccggagcg
    11701 ggtctcgcat ttgatcttgt acggcggctt tgcgacgggg gccaataagc ggtcgaccct
    11761 gacggcggct ggccgcgagc gccttgcggc gatgaatacc ctcgtcaaac aaggctgggg
    11821 cgccgacaat ccggcattcc gccagatgtt tacttctttg ttgatgccca ccgccaacaa
    11881 ggaccaaacg gacgcgttca acgggctgca acgcctgagc gcgtcgcccg agtgcgctgc
    11941 gcgctatctg gaaacggtgg gcgatctcac cgtacttgaa cttttgtctc aggtgaaggc
    12001 gccgacgatc gtcatgcatg ttcgcgacga ctcgctggtt ccgagcacac tgggccgtga
    12061 actggcggca ggaataccgg gcgcccggtt cgtggcgcta cctggcaaga accatattcc
    12121 gctggagcag gaccccagcg tgccccggtt gttcgaggaa ctcaaagact tcttgaggaa
    12181 cgtatcttag ctgcgagagc gcttgcagga gccgccttga ttggcggacc agattttttt
    12241 acctggtgtc ggctcgggaa agcgtcgact ggctcacacc ggcgcgtcga agttcggatc
    12301 ggtcaacagg cgaaagccgc cgacttcgat gagcgcgggt cggtccgccg atcagggtga
    12361 ttttggctgc tgtcatcggc gatgccttcc gatgtttggt catgccggcg cgccgccggc
    12421 gttcaggttt tcaagcgata gccggttttg aagatccatg agatggcgac gaggcacgcg
    12481 gcgagaaaca ggacggtgat cgccacgctg atgccgaaat ggacgtcggc gagctcgaag
    12541 aagctccagc ggaagccgct gatcaggtag accagcgggt tgaacagcgt caccgtgcgc
    12601 cagaacggcg gcaggaggct ggtcgaatag aacgtgccgc cgaggaaggt cagcggcgtg
    12661 atgatgagca tcggcacgat ctgcagcttc tcgaagccgt cggcccagac gccgagaatg
    12721 aagccgaaca ggctgaagct gaccgaggtc agcaccagaa aggccagcat ccacaccggg
    12781 tgcgcgatcc gcagcggcac gaacagcgcc gaggtgccga gaatgatcag gccgagaatg
    12841 atcgacttgg tcgtggcggc gccgacatag ccgatgagga tttcgacgta cgacaccgga
    12901 gccgagagga tttcgtagat ggtgccgacg aagcgcggga agtagatgcc gaaggaggcg
    12961 ttcatgatgc tctgcgtcag cagcatgagc atcatcagtc cggggacgat gaacgcgccg
    13021 tagctgacgc cctcgatctc gctgatgcgc gagccgatcg cggcgccgaa gaccacgaaa
    13081 tagagcgagg tcgagatcac tggcgagacg atgctctgca gcatagtgcg ccgcgtgcgc
    13141 gccatctcgt agcggtaaat cgcggcgatg gcgtggaggt tcatcggttc ttcctcagca
    13201 ggccgacgaa gatgtcctcc agcgatgttt ccgtcgtgtg caggtccttg atgcgcaatc
    13261 cggcgagatg cagatcgtcg atcagctcgg tgatgccggt ctcgccgctg ccggtatcgt
    13321 agttgtagac gagcttgcgg ccggcgtcgg caagcgtcag cgcgtgccgg gcaagcgccg
    13381 gcggcacggc ggcgagcggc tcgcgcagct cgagcgtcaa ccgcttgcgg ccgagcttgc
    13441 gcatcagctc ggtcttgttc tcgaccaaga tgagctcgcc cttgttgatc acgccgaccc
    13501 gatcggccat cagctcggct tcctcgatgt aatgcgtggt caggatgatg gtcatgccct
    13561 cggcgcgcag cccgcgcacc atctcccaca tgtccttgcg cagctcgacg tcgacgccgg
    13621 cggtcggctc gtcgaggaag aggatgcgcg gttcgtgcga cagcgccttg gcgatcatca
    13681 gccggcgctt catgccgccg gacaaggtca tgatcttgtc gttgcgtttg tcccagagcg
    13741 aaagctctct gagtatcttc tcgaggtagg ccgcgttggc gggcttgccg aacagcccgc
    13801 ggctgaacga ggtcgtcgac cacggcgagg tgaacgcgtc ggtcgtgatc tcctgcggca
    13861 ccagcccgat cagcgagcgc gcggcgcggt agtcggtgat gatgtcgtgg ccctcgacag
    13921 cgatcttgcc ggcggtcgga ttgacgatgc cgcagatgac gctgatcagc gtcgtcttgc
    13981 cggcgccgtt cgggccgagc ag
//
LOCUS       DATMQB010000229         2206 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2251514, whole genome shotgun sequence.
ACCESSION   DATMQB010000229 DATMQB010000000
VERSION     DATMQB010000229.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2206)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2206)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2206
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2251514"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(231..1571)
                     /locus_tag="VNY79_07020"
     CDS             complement(231..1571)
                     /locus_tag="VNY79_07020"
                     /inference="COORDINATES: protein motif:HMM:NF014385.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TolC family protein"
                     /protein_id="HWX72232.1"
                     /translation="MPENTAVQLPTPADIDPKHVYSLVELIDIAQRRNPATRVAWEQA
                     RQAAINVGIARAAYLPALTASAVAGWEHFVTPFPSNLVPQGFIIFNAQEVIPQLAVNY
                     LLLDFGGRAAAVEAAGQLSIAGNVAFTTAHQQLIFNVARAYFTLDGADAAVRAAQQGL
                     ADAQVVQQSAEALFGRGLDTIVDVQLARRATAQAQYDLAQANTAQHEAMYTLLAAMDL
                     PPTTKLRVADASAHPLPQRTARTVDDVLSGALRRRPDLLADVAKLRATDAEIAAARSA
                     LAPKVSLSANVQGNLGRLNVNNSPYFSVNKPQGAALLKFEWPLYTGGLLQNKLSLAQS
                     KREEAAAGLNERVDQALREVALAYDQVDTGLQQYDAAIALQTASEAAFHSASDSYAHG
                     VGTLTDATSAQTGLATARAAVARAHTQSLINAAALAFATGALTSSTDFSTVTPR"
     gene            complement(1732..>2206)
                     /locus_tag="VNY79_07025"
     CDS             complement(1732..>2206)
                     /locus_tag="VNY79_07025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72233.1"
                     /translation="EMAFGQAITQARAVLVNDPFETSEVRRAVGRRPIDASVVEQVGR
                     LFIPVSAILDLRSDLAGHDLPQPMHDAIRAHHQALAAWFQQAASWTRSGEGAGEVSGG
                     LPEPPPLSGPGDHLAAFATWYRLLHEDIRKILDEVGPQPQLPITPSFGDALHATG"
BASE COUNT          351 a          724 c          762 g          369 t
ORIGIN      
        1 cagcaggcgg gctgggtcta cttcgcaggc tatgacgcca acaagatgcc ggcccacaac
       61 accgcctgga ttatcggcgg gccggaggca gccgcgatca gcggaccgtg acgaacccag
      121 ctcttgatca atctcgagcg ccggcagctc ggcgccgaga aagcggccgt tccgtggtat
      181 ccgatcggaa ctgcgatcgg cgaggcccca acccgttccg tgcagcagca ttatcgcggt
      241 gtcacggtgg agaaatccgt actcgacgtc agcgcgccgg tcgcgaaggc gagcgccgcc
      301 gcgttgatca gcgactgcgt gtgtgctcgg gccaccgcgg cgcgcgccgt cgcgagcccc
      361 gtctgcgcgg acgtcgcgtc ggtcagtgtg ccgacgccgt gcgcatagga atcgctggcg
      421 ctgtggaagg ccgcttcgga tgcggtctgc agggcgatgg cggcatcgta ttgctgtagc
      481 cccgtatcga cctggtcgta ggcgagtgcc acctcgcgca aagcctggtc gacgcgctca
      541 ttcagcccgg ccgcggcctc ttcgcgcttc gactgggcga ggctcagctt gttctgcagc
      601 agtccgccag tgtagagcgg ccattcgaac ttcagcaacg cggcgccctg cggcttgttg
      661 accgagaaat agggcgagtt gttcacgttg agccggccga gattgccctg cacattcgcg
      721 ctcagcgaaa ctttcggggc tagggcggag cgtgcggccg cgatttcggc atccgtcgcg
      781 cgcagcttcg ccacgtcggc gagcaagtcg ggccgccgcc gcagggctcc gctgagcacg
      841 tcgtcgacag tgcgtgccgt gcgctgcggc agcgggtgtg cggacgcgtc cgccacgcgc
      901 agcttcgtgg tcggcggcag gtccatcgcc gcaagcagcg tgtacatcgc ctcgtgctga
      961 gcggtattgg cctgcgcgag atcgtactgc gcctgcgccg tcgcgcgccg ggcgagctgg
     1021 acgtcaacga tggtgtcgag gccgcggccg aacagcgcct cggcagattg ctgcaccacc
     1081 tgcgcatcgg ccaagccttg ctgcgccgcg cgtactgcgg cgtcggcgcc gtccaacgtg
     1141 aaatatgcac gggccacgtt gaagatcagt tgctgatgcg ccgtcgtgaa cgccacgttc
     1201 ccggcgatcg aaagctgacc cgccgcttcg accgccgctg ctcggccgcc gaaatcgagc
     1261 agcagatagt ttacggcgag ttgcgggatt acttcctgag cgttgaaaat gatgaagcct
     1321 tgcgggacga ggttgctggg gaacggcgtc acgaagtgct cccagccggc aaccgcgctc
     1381 gccgtcagcg ccggaagata ggcggcgcgc gcgatgccga cattgatcgc cgcctgccgc
     1441 gcctgttccc aggcgacgcg cgtcgccggg ttgcggcgct gcgcgatatc gatcagctcg
     1501 acgagcgaat agacgtgctt ggggtcgatg tcggcaggcg tcggcaactg gactgcggtg
     1561 ttctccggca ccgcgaaccg ccgagccttg acagcggcgg gtgcaggtgc tgtcggcgct
     1621 tctttggacg gctcgaattg ccaaggtgtg tcgggcgaag caggcgcgag gtcgcgcgtg
     1681 tcattgcagg cgccaagcag cacaaatccg gtgaaggcga tacgtccgaa cctagccggt
     1741 ggcatgcaat gcgtccccga acgacggcgt gatcggcagc tgcggctgcg gaccaacctc
     1801 gtcgaggatc ttgcgaatat cctcgtgcag caagcggtac catgttgcga acgccgcgag
     1861 gtgatcgccc gggccggaca ggggcggcgg ttccggtaga ccgcctgaca cctctcccgc
     1921 tccctcgcca ctgcgcgtcc atgacgctgc ctgctggaac cacgctgcca gcgcctggtg
     1981 atgcgcgcga atcgcgtcgt gcattggctg gggaaggtcg tgcccggcca gatcgctgcg
     2041 caaatcgagg atcgccgaga cggggatgaa cagccggccg acctgctcta ccacactcgc
     2101 gtcgatcggg cgcctcccga cggcgcgccg cacctcgctc gtttcgaacg gatcgttgac
     2161 caggaccgcg cgcgcctggg tgatcgcctg cccgaacgcc atctcg
//
LOCUS       DATMQB010000230         6189 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2879116, whole genome shotgun sequence.
ACCESSION   DATMQB010000230 DATMQB010000000
VERSION     DATMQB010000230.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6189
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2879116"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(61..312)
                     /locus_tag="VNY79_07030"
     CDS             complement(61..312)
                     /locus_tag="VNY79_07030"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system
                     prevent-host-death family antitoxin"
                     /protein_id="HWX72234.1"
                     /translation="MTTHSVADAKKRLPELIDRALEGEESSSRVMARPVVELEAIPRH
                     AKPVAPADLDWLAARCVGRKLPDEDAGTFVSRMRDEDER"
     gene            494..1726
                     /locus_tag="VNY79_07035"
     CDS             494..1726
                     /locus_tag="VNY79_07035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HWX72235.1"
                     /translation="MPTSSISTRCCIAGGGPAGMMLGFLLARAGVDVVVLEKHADFLR
                     DFRGDTIHPSTLELMYELGLLEEFLKLPHQKVERLSGQIGDERVQFIDLTHVPTHCKY
                     IALMPQWDFLGFLAAHGRRYKSFDLRMRAEAADLIEEGGRVVGVRAHTPDGALMIRAD
                     LVVGADGRHSTIREKAGLKSDDYGAPMDVLWFRLPRKDPDETETFGHIEAGMMLVMLN
                     RGDYWQCAFLIPKGGIERVKAAGLDAFRARVVMLTPYFADRIAELKSWDDVKLLSVTV
                     DRLRQWWRPGLICIGDAAHAMSPVGGVGINLAVQDAVAAANRLVAPLKAGTVSDDDLR
                     AIEARRTFPVRFTQRLQLIMQNQIISRALTTTQRPKPPFMFKLFDRFPLLRRIPGRLL
                     AVGVRPEHIHTPDVLAAS"
     gene            1809..3728
                     /gene="htpG"
                     /locus_tag="VNY79_07040"
     CDS             1809..3728
                     /gene="htpG"
                     /locus_tag="VNY79_07040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011316010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone HtpG"
                     /protein_id="HWX72236.1"
                     /translation="MSTIEENKPESRPFEADVAKLLHLMVHSVYSDKSVFLRELIANA
                     ADACERLRYDAIAEPALLGDDVKPRITLAIDADKRTLAVEDNGIGMGREEMVEALGTI
                     ARSGTKAFLDRLEAAQGEAAEAAAEGSTLIGRFGVGFYSAFMVAERVEVISRRAGTDA
                     AFLWSSDGKGTFAVSAADPADAPRRGTRVVLHLMEDAKSYTERFTIERLVKAHSGHVP
                     VPISIIEKPGAEPSEITDGAALWAKPKAEITPADYTDFYRSVAGQFDEPALTIHFHAE
                     GRQDYTTLLFVPGSRPFDLFDPDRRGRIKLYVKRVFITDDAEILPRYLRFLRGLVDSA
                     DLPLNVSREKIQESPLLAAIRKGVSSRVLGEFERLADKEPQTYTKIWETFGAVLKEGI
                     YEDFERRDALLGLARFKTTTSAGGWRSLKDYVAAFKTNQTAIYYLAGDDMARLESSPH
                     LEGFRARGVEVLLLPDPVDSFWAMPGVSFDGKPFKSVTQGAADLAAIALTDATEAPPP
                     ELQDSVKTFLAFIKNTLGETVAEVRVSDRLTDSAVCLVAPDSGPDRALEKLLAGAGRL
                     TAASKPILEVNPRHELVVALAALGEDERAFKEDAAHLLFDEARVLDGERPADARAFSA
                     RLARVLGKGLSKGTD"
     gene            4116..4274
                     /locus_tag="VNY79_07045"
     CDS             4116..4274
                     /locus_tag="VNY79_07045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72237.1"
                     /translation="MNDGTNFTTELDHADEDIWYEVSDEILEAAGSHVEGQSLVTIGP
                     TVMTGGCC"
     gene            complement(4642..>6189)
                     /locus_tag="VNY79_07050"
     CDS             complement(4642..>6189)
                     /locus_tag="VNY79_07050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018042078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OB-fold nucleic acid binding domain-containing
                     protein"
                     /protein_id="HWX72238.1"
                     /translation="GPIQGDMVHPYLRRRDGIDQEHYPSPAPAHGPADELKEVLKRTL
                     GVPLFQEQAMQIAITAAKFSPDEADGLRRAMATFRHNGTVHLFRDKFIDGMTARGYDR
                     EFAEHCFGQIEGFGEYGFPESHAASFALLVYASSWIKCRYPDVFCAAILNSQPMGFYQ
                     PAQLVRDARAHDVEIRAVDVNFSDWDCTLEPAAPACGTADSKEPSPPCAGRKEGSHAV
                     RLGFRLVHGLNEDELQKLVAARGNGFSSIERLAAVAGVSRFTIERLAEADAFRSLKLD
                     RRAALWAARRLDAIGLKSAVLNLRRHPGTTAPRPAKSKRPEADREIAAKKDQSLPLLA
                     PHLSEELFPEPEVALPAMALSEHVVEDYVATGLSLKDHPVRFFRNRLTTLGGVRNAAL
                     RGDELRQDSRVTVAGLVLVRQRPGTAQGVIFMTLEDETDIANIIVWPKVFAKNRRTVM
                     SARFLAVRGRLQRAGLVIHVVAESFVDLSAELPWLREGGDLFSPKFSGGPLPPDAALP
                     LKSRDFH"
BASE COUNT         1090 a         1986 c         2019 g         1094 t
ORIGIN      
        1 gagcagtcaa cgtgtcgatg gtgaacaggg ataccgggat gctcgcgtcg agatagacac
       61 tcaacgctcg tcctcgtcgc gcatcctgct gacgaaagtc ccggcatcct cgtccggtaa
      121 ttttcttccg acgcagcgcg cggcaagcca gtcgagatca gcgggcgcta ccggcttagc
      181 gtgtcgcggg atggcctcga gctcaacaac tggccgggcc atgacgcgtg acgacgattc
      241 ctcaccctcg agcgcgcggt cgatcaactc cgggagccgc ttcttggcgt cggcgacgct
      301 gtgggtggtc actgaagaat tatagccatt tgataaccct ttttatcgag cttatgtagg
      361 cgtggtcgcc gcctgctaaa atgttgatct tcccggctcg tcagcgttcc tcatctagag
      421 gtctggactc gcggggccgc gacgagtgcg agttctccct gggtcgccga agcgaccaag
      481 ccacggagct gcgatgccca cctcatcgat cagcacccga tgctgcattg ccggaggcgg
      541 gccggccggg atgatgctcg gcttcctgct cgcgcgcgcc ggcgtcgatg tcgtcgtgct
      601 cgagaagcac gcggatttcc tgcgcgactt tcgcggcgac accatccatc cctcgacgct
      661 ggaactgatg tacgagctcg ggctgctcga ggagttcctc aagctgccgc accagaaggt
      721 cgagcggctg agcggtcaga tcggcgacga acgggtgcag ttcatcgatc tgacccatgt
      781 gccaacccat tgcaaataca tcgcgctgat gccgcaatgg gattttctcg gttttctcgc
      841 tgcgcacggc cggcgttaca agagcttcga tctgcgcatg cgggcagagg cggctgatct
      901 gatcgaggag ggcggccgcg tcgtcggggt tcgtgcgcac acgccggacg gcgcgctgat
      961 gatccgcgcc gacctcgtcg tcggcgccga cgggcgccat tcgacgatcc gggagaaggc
     1021 cggcctgaag agcgacgact acggagcgcc catggacgtg ctctggttcc gcctgccgcg
     1081 caaggacccg gacgagaccg aaacgttcgg ccacatcgag gccggcatga tgctggtcat
     1141 gctcaaccgc ggcgactact ggcagtgcgc tttcctcatt cccaagggcg gcatcgagcg
     1201 cgtcaaggca gccggcctcg acgcgttccg tgcacgtgtg gtgatgctga cgccctactt
     1261 cgccgaccgc atcgcggaat tgaaaagctg ggacgacgtc aagctcttga gcgtcactgt
     1321 cgaccggttg cggcagtggt ggcgaccggg gctcatctgc atcggcgacg ccgcgcacgc
     1381 gatgtcgccg gtcggcggcg tcggcatcaa cctcgccgtc caggacgcag tcgccgccgc
     1441 caaccgcctg gtcgcgccgc tcaaggccgg caccgtgagc gacgacgacc tccgcgcgat
     1501 cgaggcgcgc cgaacattcc ccgtgcgctt cacgcagcgg ctgcagctca tcatgcaaaa
     1561 ccagatcatc agccgcgcgc tcacgacgac gcagcggccg aagccaccgt tcatgttcaa
     1621 attgttcgac aggttcccgc tgctgcgccg catccccggc cggctgctcg ccgtgggcgt
     1681 ccggcccgag cacatccaca cgccggatgt gctcgctgcg tcatagatcg atcagctcgg
     1741 ccctgccttg aatcggcgac agcttcactc catttccggc ccgataagtg ccgcgctggg
     1801 aacctgccat gagcacgatc gaggaaaaca aaccggagag ccggccgttc gaggccgatg
     1861 tcgccaagct gctgcacctg atggtgcatt cggtctattc cgacaaatcc gtatttctgc
     1921 gcgagctgat cgcgaatgcc gcggacgcct gcgagcggct gcgctacgac gcgatcgccg
     1981 agccggcgct gctcggcgat gacgtcaagc cgcgcatcac actcgccatc gatgccgaca
     2041 agcggaccct cgccgtcgag gacaacggca tcggcatggg ccgcgaggag atggtagagg
     2101 cgctcggcac gattgcgcgc tcgggcacca aggcctttct cgatcggctc gaagcggcgc
     2161 agggcgaggc ggcggaggcg gcggcggaag gctcgacgct catcggccgg ttcggcgtcg
     2221 gcttctactc ggccttcatg gtggccgagc gtgtcgaggt gatctcccgc cgcgcgggca
     2281 ccgacgcggc ttttctctgg tcttccgacg gcaagggcac tttcgccgtg tcggcggccg
     2341 atcccgcgga tgcgccgcgc cgtggcaccc gcgtcgtgct gcatctcatg gaagacgcca
     2401 agtcgtacac cgagcgcttc accatcgagc gcctggtcaa ggcccactcc ggtcacgtgc
     2461 cggtgccgat ctcgatcatc gagaagccgg gcgctgaacc gtcggagatc accgacggcg
     2521 ccgcactgtg ggcgaagccg aaagccgaga ttacgcctgc ggactacacc gatttctacc
     2581 gcagcgttgc tggacagttc gacgagccgg cgctgaccat ccatttccac gccgaggggc
     2641 ggcaggacta caccacactc ttgttcgttc ccggctcgcg gcctttcgac ctgttcgatc
     2701 ccgaccgccg gggtcgcatc aagctctacg tcaagcgcgt cttcattacc gacgacgccg
     2761 aaatcctgcc gcgctatctg cgcttcctgc gcggcctggt cgacagcgcc gacctgccgc
     2821 tcaacgtctc gcgcgagaag atccaggaga gcccgctcct agccgcgatc agaaagggcg
     2881 tgtcgagccg cgtgctcggc gaattcgagc ggctcgccga caaggagccg cagacctata
     2941 cgaaaatctg ggaaaccttc ggcgccgtgc tgaaggaggg catctacgag gatttcgagc
     3001 gccgcgacgc gttgctcggg ctcgcgcgct tcaagaccac gacgtcggcg ggcggctggc
     3061 gcagcctcaa ggactacgtc gccgcgttca agaccaatca gacggcgatc tactacctcg
     3121 ccggcgacga catggcgcgg cttgaatcct cgccccatct cgaaggcttt cgtgctcgcg
     3181 gcgtcgaagt gctgctgctg cccgatccgg tcgacagctt ctgggccatg cctggcgtgt
     3241 cgttcgacgg caagccgttc aaatcggtga cgcaaggggc ggcggatctc gccgccattg
     3301 cgctcaccga cgccacggag gcgccgccgc cggagctgca ggattcggtc aagacgtttc
     3361 tcgccttcat caagaacacg ctcggcgaga ccgtagcgga agtgcgcgtg tcggaccggc
     3421 tcaccgacag cgcggtctgc ctggtcgcgc ccgattccgg tcccgaccgg gcgctggaaa
     3481 aactgctcgc cggcgccggg cggctgacgg ccgcgtcgaa gccgatcctg gaagtcaacc
     3541 cgcgtcatga gctggtcgtg gcgctcgccg cgctcggcga ggacgagcgc gccttcaagg
     3601 aggacgcggc gcatctgttg ttcgacgagg cgcgcgtgct cgacggcgag cgcccggcgg
     3661 acgcgcgcgc cttctccgcg cggctcgcgc gcgtgctcgg caagggtttg agcaagggta
     3721 ccgattgacg cccgtaatcc tcatccgcct ggcatccata aggaataggc cattcgtcgg
     3781 cggccaacag gggggacgct ttccgagttg cccgtgaagc cgacattgtt cctgcagtcg
     3841 gaatatcgac ttggccagca gcgacatttc gcgacggaga agagcagcaa gccttttcgc
     3901 cgttcggacc actgtgattt gcgtcaaaac aggctgattt gcgcgggcgt agccgccggc
     3961 gacaaagaat gactgtccat ggtatcgagc gagaccagcg aatcgagagc ctctatattc
     4021 gtcaatctct ttgggttatc ttcgtcgcgg gttcgattcg gttagttggg acgaatgttt
     4081 acccgcgcgg cgacgagcga agaggaataa tccccatgaa cgacggcacc aacttcacca
     4141 ccgaactcga ccacgccgac gaagatatct ggtacgaagt ctccgacgag atacttgagg
     4201 cggcgggcag tcacgtggag ggccaatcct tggtgactat tggaccaacg gtcatgacgg
     4261 ggggatgctg ctgacttgac gagtcggtca gcgaggcgtg cttgaggcgg gcagcgtacc
     4321 gagatcgttg tcgcaggtag ccagcggcgg tctctccggc tcaggcggat tgttttcttt
     4381 tagggcatat ttgattgaaa ctgagtcgct gcccccgatc gtcaccttga ggtgcgagca
     4441 aagcgaccct cgaaaatgca tgtccgaggc cgtcgccttc gaggtccgct ccgcggccac
     4501 cttagggtga ctgacatggt aagcgcgaac cacttcgatc tgctcatccg cttgtctcgg
     4561 cgatgcttcc aagcttcaag tatccacggc atcaccaatt tccaaagctg ctcggcaaag
     4621 gcactgcttg aagaagaatg atcaatgaaa atcccggctc ttgagtggga gcgcggcgtc
     4681 cggcggcagc gggccgccgg agaatttcgg tgagaacagg tcgccgccct cgcgcagcca
     4741 cggcagttcg gcggagagat cgacaaagct ttccgccacc acgtggatca cgagaccggc
     4801 tcgctgcagg cgtccgcgca cggcgaggaa gcgcgcgctc atcaccgtgc ggcggttctt
     4861 tgcgaagacc ttgggccaga cgatgatgtt ggcgatgtca gtctcgtctt cgagcgtcat
     4921 gaagatcacg ccctgcgccg ttcccggacg ctggcgcacc agcacgaggc cggcgacggt
     4981 gacgcgcgag tcctgccgca gctcgtcacc gcgaagcgcc gcgttgcgga cgccgccgag
     5041 cgtggtgagg cggttgcgga aaaagcgcac cggatggtcc ttcagcgaca ggccggtcgc
     5101 cacgtagtcc tcgacgacgt gctcgctgag cgccatggca ggaagcgcga cctcaggctc
     5161 cgggaaaagc tcctcgctca gatgcggggc gagcagcggg agcgattgat cttttttggc
     5221 ggcaatttcc cgatcggctt cagggcgttt actcttcgcg ggccgcggtg cggtcgtccc
     5281 cggatgccgg cgaagattca gaactgctga tttgaggccg atcgcgtcga gccgccgtgc
     5341 cgcccacaac gcggcgcgcc gatcgagctt gagcgagcgg aacgcatcgg cctcggcgag
     5401 ccgctcgatg gtgaagcgcg aaacgccggc gacggcggcg agccgctcaa tgctggagaa
     5461 gccgttgccg cgcgcggcga cgagtttctg caattcgtct tcattgagcc cgtgaacgag
     5521 gcggaagccg aggcggacgg catggcttcc ttccttcctt cccgcgcaag gaggggaggg
     5581 ctctttgctg tctgctgtcc cgcaagcggg agcagccggc tccagcgtgc aatcccagtc
     5641 gctgaaattc acgtcgacgg cgcggatctc gacatcgtgc gcgcgcgcat cgcgcaccag
     5701 ctgcgccggc tgataaaaac ccatcggctg gctgttgagg atggcggcgc agaacacgtc
     5761 cggatagcgg catttgatcc acgacgaggc atagacgagg agcgcaaagc tcgccgcatg
     5821 gctttccgga aacccgtatt cgccaaagcc ttcgatctgg ccgaagcaat gctcggcaaa
     5881 ttcgcggtcg tagccgcgcg ccgtcatgcc gtcgatgaac ttgtcgcgga acagatggac
     5941 ggtgccgttg tggcggaagg tagccatggc gcggcgcagc ccgtccgcct cgtcgggcga
     6001 gaatttcgcc gcggtgatgg cgatctgcat cgcctgctcc tggaacagcg gcacgccgag
     6061 ggtgcgcttg aggacctcct tgagctcgtc ggccggccca tgcgcgggag cgggggaggg
     6121 atagtgctcc tggtcgatgc cgtcgcgccg gcgcagatag ggatgcacca tgtcgccctg
     6181 gatcggccc
//
LOCUS       DATMQB010000231         6621 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1628093, whole genome shotgun sequence.
ACCESSION   DATMQB010000231 DATMQB010000000
VERSION     DATMQB010000231.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6621
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1628093"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            247..900
                     /locus_tag="VNY79_07055"
     CDS             247..900
                     /locus_tag="VNY79_07055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014892014.1"
                     /note="This protein belongs to the uracil DNA glycosylase
                     superfamily, members of which act in excision repair of
                     DNA. However, it belongs more specifically to UdgX branch,
                     whose founding member was found to bind uracil in DNA
                     (where it does not belong), without cleaving it, appears
                     to promote DNA repair by a pathway involving RecA, rather
                     than base excision; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UdgX family uracil-DNA binding protein"
                     /protein_id="HWX72239.1"
                     /translation="MHCAGMGLDAESPIAIKTLRQLATAEENCRRCPLYRDSTQAVPG
                     DGPRRAAFMLVGEQPGDKEDLAGKPFVGPAGRVLDQALQEAGIVREETFVSNAVKHFK
                     HEMRGKRRLHKRPNIYEIERCKIWLEVERSLVKPSTIVALGATAARSLTGRAVTIGKV
                     RGKPLPMADGTTLVVTVHPSALLRIEDDDERHAAYRGFVADLKAAAAAGHARAGGKP"
     gene            complement(914..1426)
                     /locus_tag="VNY79_07060"
     CDS             complement(914..1426)
                     /locus_tag="VNY79_07060"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72240.1"
                     /translation="MIFGKPEQKGKPAEAGTPMPSAATLPPTAAAPAAAAAAAPTPVP
                     SSPVPLAVPTPGSAPAAGGSSPAPRERQTATIRYVDRPDVGETFADSITGLVFDGQTL
                     RIEFSVTRVDEVKPDAPISGRRYPASRIVLSPGAAIELINRMQQIGAALTQAGVAKTA
                     PGRGQKPPSS"
     gene            complement(1446..1778)
                     /locus_tag="VNY79_07065"
     CDS             complement(1446..1778)
                     /locus_tag="VNY79_07065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HPr family phosphocarrier protein"
                     /protein_id="HWX72241.1"
                     /translation="MSAPAHPSSECSAAEQASPADAVVRELKICNRKGLHARASAKFV
                     QTVEKFDAEVRVMRCGETVGGTSIMGLMMLAAAPGTSITVEATGKEAAEVIEALAALV
                     DSRFGEGN"
     gene            complement(1775..2176)
                     /locus_tag="VNY79_07070"
     CDS             complement(1775..2176)
                     /locus_tag="VNY79_07070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:1902495 - transmembrane transporter
                     complex [Evidence IEA];
                     GO_function: GO:0016301 - kinase activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA];
                     GO_process: GO:0016310 - phosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HWX72242.1"
                     /translation="MIGLVLVTHGRLAVEFRAALEHVVGPQSQIEAVTIGPEDDVEER
                     RKDIIEAVKRVDSGDGVAILTDMFGGTPSNLAISVMSRPKVEVLAGINLPMLVKLAKV
                     RDEWPLAEAVAAAQDAGRKYVTIASRVLTGK"
     gene            complement(2424..2873)
                     /locus_tag="VNY79_07075"
     CDS             complement(2424..2873)
                     /locus_tag="VNY79_07075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphatase C-terminal
                     domain-containing protein"
                     /protein_id="HWX72243.1"
                     /translation="MSATIHASAVLVGARAALIRGPSGAGKSRLALDLIHAARTGSLP
                     LARLVADDRVHLEAANGRLLVRPAETLAALLEVRGAGILRLAHEACAVVGFVVDLAAE
                     DAERLPQAGSRETEIAGIELPRLAVADGVTALPLVLALVTSSKHDWI"
     gene            complement(2994..4703)
                     /locus_tag="VNY79_07080"
     CDS             complement(2994..4703)
                     /locus_tag="VNY79_07080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HWX72244.1"
                     /translation="MGDLLRRAWQFFITQSFSSLTRRIVSLNVAGLLALSIGIIFLSQ
                     FRAGLIDARIQSLTVQGEIIAGAIAASATVETDSSITIDPDKLLNLQPGESYGPSEDA
                     LYGIDFPINPERVAPVLRRLVSPTKTRARIYDRDGVLLVDSRNLFGRGDVLRFDLPAP
                     NAEKPGWIERSFIAVRTWLGRGDLPLYRELGAENGKGYPEVSQALNGQNARKVRINEH
                     GDVIVSVAVPVQRFRAVRGALMLSTQGADIDDMVEAERLAILKVFLVAAGVTVLLSIL
                     LAGTIAEPVRRLADAAESVRRRIRTRVEIPDFTRRRDEIGHLSGTLRDMTNALYSRIE
                     AIESFAADVAHELKNPLTSLRSAVETLPVAKTDESRARLLSIIQHDVKRLDRLISDIS
                     DASRLDAELQRQETAPVDLAKLLSTLVTVANEVKRDDGVHVTLRFDGGGMRAFQVPGH
                     DSRLGQVVDNLIVNARSFSPPGGAVRVTCRRVKSHIEIFVDDDGPGVRPDALDKVFER
                     FYTDRPHQGFGQNSGLGLSISKQIIEAHGGAIWVENRIGPEGPDGAPQVLGAHFVVRL
                     PAM"
     gene            complement(4964..5662)
                     /locus_tag="VNY79_07085"
     CDS             complement(4964..5662)
                     /locus_tag="VNY79_07085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HWX72245.1"
                     /translation="MPTIALVDDDRNILTSVSIALEAEGYRINTYTDGASALDGFKTA
                     PPDLAILDIKMPRMDGMETLRRLRQKSDLPVIFLTSKDEEIDELFGLKMGADDFIRKP
                     FSQRLLVERVKAVLRRASPKDGVVPKEADSKVLERGLLRMDPERHTCTWKNEPVTLTV
                     TEFLILQALASRPGVVKSRNALMDAAYDDQVYVDDRTIDSHIKRLRKKFKASDVEFDM
                     IETLYGVGYRFKEA"
     gene            5846..6607
                     /locus_tag="VNY79_07090"
     CDS             5846..6607
                     /locus_tag="VNY79_07090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2470 domain-containing protein"
                     /protein_id="HWX72246.1"
                     /translation="MPNRLPENAPRPDFDPKSTAKTLLRVIRSGALATIDRNTGHPFA
                     SLVNVATDADGSPLILISRLSTHTANLEADGRAAVLMASTGKGDPLAHPRLTLIGTFR
                     PLARDDSQEARVRRRFLARHPTAELYAGFADFSFWRLGVVSAHLNAGFARAADLKAAD
                     VMTDLAGAENLIESEEGAIAHMNEDHADAVRLYATKLLGAEDAAWRLSGLDPEGLDLV
                     LGEATLRLPFPARVTSAAELRKMVVGLAQEARTKA"
BASE COUNT         1103 a         2146 c         2219 g         1153 t
ORIGIN      
        1 gcgatttcct tgcggcccca ttcggcgagg ctgaggtcct tgacgacata atcggcgtga
       61 tcggcgtgcg cggtcttctt gggcttggtc gacgtggtca tggtgatcct ttggcgctgc
      121 tggcggtcct tcgtgggtcc agggaccggg cggtgaaacg gcggcgctcc aatgggcgtc
      181 ggcgcggcgg cggtgataaa gacataaaga taactttatg tctatacctg aaccgttggc
      241 cgcgcaatgc attgtgccgg tatgggtctc gacgccgaat ccccgatagc gatcaaaacc
      301 ttgcgccagc tcgccacggc cgaggaaaat tgccgccgct gcccgcttta tcgcgactcg
      361 acccaggccg tgccgggcga cggcccgcga cgggctgcct tcatgctcgt cggggagcag
      421 ccgggcgaca aggaagactt ggccggcaag ccgttcgtcg gccccgccgg gcgggtcctt
      481 gaccaggcgc tgcaggaggc cggcatcgtg cgcgaggaaa ccttcgtcag caatgcggtc
      541 aagcacttca agcacgaaat gcgcggcaaa cgccgcctgc acaagcgccc gaatatttac
      601 gagatcgagc gctgcaagat ctggctcgag gtggaacgca gcctggtcaa gccatcgacc
      661 atcgtcgctc tcggcgcgac ggctgcgcgc agcctgaccg ggcgtgccgt caccatcggc
      721 aaggtgcgcg gtaaaccgct gccgatggcg gacgggacga cgctcgtcgt caccgttcac
      781 ccctcagcgc tgctgcgcat cgaggacgat gacgagcggc acgcggccta tcgcgggttc
      841 gtggccgatc tcaaggcggc agccgcggcg ggtcatgccc gcgccggcgg caagccgtag
      901 ccgtagcgcc tcgtcagctt gatggcggct tctggccgcg ccccggcgcc gtcttggcga
      961 cgccagcctg ggtaagggcc gctccgatct gctgcatgcg gttgatgagc tcgatcgccg
     1021 ctcccggcga gagcacgatg cggctcgccg gatagcgacg gccggagatg ggcgcgtcgg
     1081 gcttgacttc atcgacgcgc gtcacgctga actcgatgcg cagcgtctgc ccgtcaaaca
     1141 ccaggccggt gatggaatcg gcgaaagtct cgccgacgtc cgggcgatcg acgtagcgga
     1201 tcgtggccgt ctgccgttcg cgcggagccg gtgacgagcc gccagcggcc ggcgccgatc
     1261 ctggtgtggg caccgccaac gggaccgggc tggacggcac cggcgttggc gctgccgccg
     1321 ccgctgccgc cggcgcggcg gcagtcgggg gcaaggtcgc ggccgacggc atcggcgtgc
     1381 ccgcttccgc gggttttcct ttctgttcgg gcttgccgaa aatcatctgc gctctccctg
     1441 aacggtcaat tgccttcgcc gaaacgtgag tcgacgagag cggccaaagc ctcgatgact
     1501 tccgccgctt cctttccggt cgcctcgacg gtgatcgaag taccgggcgc ggcagcgagc
     1561 atcatcaggc ccatgatcga ggtgccgccg acagtctcgc cgcagcgcat gacgcgcact
     1621 tcggcgtcga atttctccac cgtctgcacg aatttggctg acgcccgtgc atgcagtccc
     1681 ttcctgttgc agatcttgag ctcgcggacg acggcgtccg ccggggatgc ctgctcagcc
     1741 gccgaacatt cgctgctggg gtgagctggc gcgctcattt cccggtaagc acccggctcg
     1801 cgatggtcac gtacttgcgg ccggcgtctt gcgcggcggc aaccgcctca gcgaggggcc
     1861 actcgtcgcg gaccttggcg agtttgacta gcatcggcag attgatcccg gcaagcactt
     1921 ccaccttggg ccggctcatg accgagatcg ccaggttcga gggggtgccg ccgaacatat
     1981 cggtcagaat ggcgacgcca tcgccgctat cgacgcgctt caccgcttcg atgatatcct
     2041 tgcgccgctc ctcgacatcg tcttcggggc caatggtcac cgcctcgatc tggctttgcg
     2101 gaccgaccac gtgctccaac gccgcacgga actcgacagc cagccgcccg tgggtgacaa
     2161 gcactagacc gatcatggaa ctccccgcgg gcgcgtccac ggtgcaccgc acgaaagggt
     2221 gctcatcttg accatccgaa gcccaagcgc aaggggcatt ctggccggat ttcggtcgtt
     2281 ggtgcattgc ggtagaacaa acccgaaatg ggtttcaggc gccgccgaac ggaccagtca
     2341 cgcagcgagt gtagcggcgc taaggttacc aatctgcaac caacgagcgg cggggggtgt
     2401 ccaggcatcg acgttccgag cgttcaaatc cagtcgtgct tggacgaagt gacaagggca
     2461 agcaccaggg gcaacgccgt gacgccgtcc gcgacggcaa gccgcggcag ctctatgccg
     2521 gcaatctccg tctctcggct tcccgcttgc ggaagcctct cggcgtcttc ggcggcgagg
     2581 tccaccacga agccgaccac ggcgcaggcc tcgtgtgcga gccgcaggat gcccgcgccg
     2641 cgcacctcca acaacgcggc aagcgtttcg gcaggacgca ccagcaatcg tccgttggcg
     2701 gcttcaagat ggacgcggtc gtcggcgacg agtcgtgcca acggcaacga gcccgtgcgc
     2761 gccgcatgaa tgagatcgag cgcgagccgc gacttcccgg ctccggacgg tccgcggatc
     2821 agtgccgctc gcgcgccgac cagaacggcc gaggcgtgga tggtcgctga cattatcggc
     2881 tcgtcattcg cgcgtctcgg tggaagcgag gacgcggaga ttccgccgcg ccgatgcagt
     2941 ctgtttctgg attcccgctt gcgggagaac gagcgaaggg ggcttcggca gcatcacatg
     3001 gccggcaggc gcacgacgaa gtgcgcgcca agcacttgcg gtgcgccgtc tgggccttcg
     3061 gggccgatcc ggttctcgac ccagatggcg ccgccatgcg cctcgatgat ctgcttggag
     3121 atcgagaggc cgaggccgga attctggccg aaaccctggt gcgggcgatc ggtgtagaaa
     3181 cgctcaaaaa ccttgtcgag cgcgtcgggc cgcacgcccg gcccgtcatc gtccacaaat
     3241 atctcgatgt ggctcttcac ccgccggcag gtgacgcgca ccgccccgcc gggcggcgag
     3301 aacgagcgcg cgttcacgat caggttgtcg acgacctggc ccaggcgcga atcgtggccc
     3361 ggcacctgaa aagcgcgcat cccaccgcca tcgaatcgca aggtcacgtg cacgccatcg
     3421 tcgcgcttga cctcgttggc gacagtcacc agcgtgctga gcagcttggc gaggtcgacg
     3481 ggggccgttt cctggcgttg cagctcggca tcgaggcggc tggcatcaga aatgtccgag
     3541 atgaggcgat cgagccgctt cacgtcatgc tggatgatgc tgagcagccg tgcgcggctc
     3601 tcgtcggtct tggccaccgg cagcgtctcg accgcggagc gcagcgacgt cagtgggttc
     3661 ttgagctcgt gggcgacgtc ggcggcaaag ctttcaatgg cttcgatccg gctgtagagc
     3721 gcgttggtca tgtcgcgcag cgtgcccgag agatggccga tctcgtcgcg tcggcgggta
     3781 aaatcgggaa tttcgacccg cgtgcgaatc cgccggcgca cgctctcggc cgcatctgcg
     3841 agccgccgca ccggctcggc gatcgtgccg gcgagcagga tcgaaagcag caccgtaacg
     3901 ccggcggcca ccagaaagac cttgaggatg gccagccgct ccgcttccac catgtcgtcg
     3961 atgtcggcgc cctgggtcga cagcataagc gcgccgcgca cggcgcggaa ccgctggacc
     4021 gggacggcga ccgagacgat cacgtcgccg tgctcgttga tgcgcacctt cctggcgttc
     4081 tggccgttca aggcctggga cacttcgggg tagcccttgc cgttctccgc gccgagttcg
     4141 cgataaagcg gcaggtcgcc gcgcccaagc caggtgcgca ccgcgatgaa ggagcgttcg
     4201 atccacccag gcttttccgc gttcggcgcc ggcaggtcga agcgcaggac gtcgccccgg
     4261 ccgaacaggt tgcggctgtc gacgagcagc acgccgtcgc gatcgtagat gcgggcgcgg
     4321 gtcttggtcg gggagaccag gcgccgcagc accggggcta cgcgctcggg attgatcggg
     4381 aagtcgatgc cgtagagcgc gtcctcggac gggccgtagc tctctcccgg ctggaggttg
     4441 agcaatttgt cggggtcgat ggtgatcgag gaatcggtct cgactgtcgc cgaggcggcg
     4501 atcgcaccgg cgatgatttc gccctgcacc gtcaggctct gaatgcgggc atcgatcagc
     4561 ccggcgcgga actgggagag aaagatgatg ccgatcgaca gcgcgagcag cccggcgacg
     4621 ttgagcgaga cgatgcggcg cgtgaggctg gagaagctct gggtgatgaa gaattgccag
     4681 gcgcggcgca acagatcgcc gatcctgccg aggccgtggt gggcgacggg cgccgcagtc
     4741 tcgccgcggg tctcagcctc gacgggagcc aatggggggg ccgcgtgggc ctctgcgatc
     4801 tctgcggttc ggtcgagcac gtcgcgtcta ccggatcccg gtcatgcaga gttcattgta
     4861 tcgcgcgcca gccgccccgt cagtctctac gggcggcggc ttggccggcc ccgcttgagg
     4921 ccggttgcat cgaggcgccg cttgggcagc agggcaacgc gttctacgct tccttgaagc
     4981 gatagccgac gccgtagagt gtctcgatca tatcgaactc gacgtcgctt gccttgaact
     5041 tcttgcgcag ccgcttgatg tggctgtcga tcgtccggtc gtcgacatac acctggtcgt
     5101 cgtaggccgc atccatcaag gcgttgcggc ttttcaccac tccgggcctg ctcgccagcg
     5161 cctgcaggat gagaaattcg gtcaccgtga gcgtcaccgg ctcgttcttc caggtgcagg
     5221 tgtgccgctc cggatccatc cgcagcaggc cgcgttccag aaccttgctg tcggcttcct
     5281 tgggtacgac gccgtccttg ggcgaggcgc ggcgcaacac ggccttgacg cgctcgacca
     5341 gcaggcgctg cgaaaacggt ttgcggatga agtcgtcggc ccccattttc aggccgaaca
     5401 attcatcgat ctcttcatcc ttcgaggtga gaaagatcac cggcaggtcg gatttctgcc
     5461 gcagccggcg caacgtctcc atcccatcca tgcgcggcat cttgatgtcg agaatggcga
     5521 ggtcgggcgg agcggtcttg aacccgtcga gggcggaggc gccgtccgta taggtgttga
     5581 tgcgatatcc ttcggcctcg agggcaatgg ataccgaggt caggatattg cggtcatcat
     5641 cgaccagagc gatggttggc atggcggccg ccttctaaca tgagtcggcc gcagcatcag
     5701 ccccggcccc ataagccttt gaatccccat gtagaggcgg aagtgtgaca ggacaaggca
     5761 aagtcggggc aattcctgtg agctagatta aaaccggaga aaacgcatgg ccgaggcgga
     5821 ggatacggcc cgtttgccag gcttcatgcc gaatcgcctg cctgaaaatg ccccacgccc
     5881 ggacttcgac ccgaaatcga cggccaagac cttgttgcgg gtgattcggt cgggagcgct
     5941 tgcgaccatc gaccgcaata cggggcatcc gttcgcctcg ctcgttaacg ttgccactga
     6001 tgccgatggc tctccgttaa tcctgatctc ccggctttcc actcacaccg ccaacctgga
     6061 agcggatggc cgcgccgcgg tgctgatggc ctcgaccggg aagggcgatc cgctcgccca
     6121 tccgcgcctc accctcatcg gcaccttccg gccgctcgcg cgcgacgact cgcaggaggc
     6181 gcgggtgcgc cggcgctttc ttgcccgcca tccgacggcc gagctttacg ccgggttcgc
     6241 cgatttctcg ttctggcggc tcggcgttgt ttccgcgcat ctcaatgccg gcttcgcccg
     6301 cgctgccgat ctgaaagcgg ccgacgtcat gaccgacctt gcgggcgcgg agaatctgat
     6361 cgaaagcgag gagggcgcga tcgcgcacat gaacgaagac catgcggacg ccgtgcggct
     6421 ctacgcgacc aagcttctgg gcgcggaaga cgcagcctgg cgccttagcg gccttgatcc
     6481 ggaaggtctc gatcttgtgc tcggcgaggc gacgctgcgc ctgccattcc ccgcgcgcgt
     6541 cacgagtgca gccgaactgc gcaagatggt cgtgggtctc gcgcaagagg cgcggacgaa
     6601 ggcctgacgc cgattgattc g
//
LOCUS       DATMQB010000232         6917 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4417946, whole genome shotgun sequence.
ACCESSION   DATMQB010000232 DATMQB010000000
VERSION     DATMQB010000232.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6917)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6917)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6917
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4417946"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..298
                     /locus_tag="VNY79_07095"
     CDS             <1..298
                     /locus_tag="VNY79_07095"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72247.1"
                     /translation="TTTTILAHWPMLARTMWLEHGLWLSCRSERGSISPNCNKLDFES
                     VVQLNFVAGDPTTMTAARWRSLGRQCFFGICVLAIQQFFWSATAWFEVFSLPIA"
     gene            815..1687
                     /locus_tag="VNY79_07100"
     CDS             815..1687
                     /locus_tag="VNY79_07100"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX72248.1"
                     /translation="MPLAVYLNVAVGGVLTGLVYGLMALGLSVIFGVVRVVNFAHGEM
                     MTVAMFIAVVLFSWFHLDPLIMLVPIAAVLFAFGYALQASLINPFITRPEHSQFLLLV
                     ALAIIIANALLIMFGPDARSVQTSYAYDSFQLGPLIVDAAKLYAGAAAIMFTAALFAV
                     FRFTPVGKAIRACADNYTGALVVGLDVTHLYALTFGLGAACVGAAGTMLVLLIDPTPM
                     LGPGYTLLAFVIVITGGLGSMPGALVGGVLIGVTEALAGLLFTPSLKSMFAFAILVLV
                     LLFRPQGILGRRLA"
     gene            1701..2702
                     /locus_tag="VNY79_07105"
     CDS             1701..2702
                     /locus_tag="VNY79_07105"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX72249.1"
                     /translation="MSGLSAGLSRRRAALLTLLLAALVAAPWLVNDYLLTVLILILYF
                     AYAGQAWNVMMGFAGQLSLGHALYVGLSGYVAAMLFTRLGVGPWLGLLAAIPLAAACG
                     AVIGYLAFRFRVAGVYFAILTIAFAEFARIGFDNWGFVNGSSGLFLPVTQYEHNDLWL
                     LRGAPAMFYYVILAATALVFVLCHFLVRSRIGYFWLAIREDEEAARAVGIDTFRYKMY
                     AVMVSAAVTSFAGVFYAFFYNNLFPEQVFSISRSIEIILGPIIGGIGTLFGPILGAFV
                     LTGLAEALNAVMGAFGLELPGAKQVFYGVCLLLVVVALPDGVWPPLARRLGVAERKP"
     gene            2699..3424
                     /locus_tag="VNY79_07110"
     CDS             2699..3424
                     /locus_tag="VNY79_07110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007594457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX72250.1"
                     /translation="MTALLTLERVSKRFRGLTAVDNVSFAVPAGVIFAVIGPNGAGKT
                     TLFNMIAGTLAPDGGAITFAGNPIEGLSADAVCRRGVARTFQIVRPFPALTVEDNVTI
                     GALLHRHDVGAARQRAQELLRRLDLFDKRQRLASTLTLPDRKRLEVARALATGPRLLL
                     LDEVMAGLRPTETDRMVAILRELNRDGGLTILLIEHVMRAVMALASHVLVLDHGVAIA
                     EGTPDAIVRDPAVVQSYLGAEAV"
     gene            complement(3474..4583)
                     /locus_tag="VNY79_07115"
     CDS             complement(3474..4583)
                     /locus_tag="VNY79_07115"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: protein motif:HMM:NF005085.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HWX72251.1"
                     /translation="MLARPNGRPPFRADHVGSLLRPPELRQAYKDHQAKRIDGEYFAQ
                     ILDRCIRDVVALQEAAGFRVVTDGEFRRGSYWGRFVERIEGFVIRPAAFKFRDDHGHE
                     VDFTATYAAGRLSRSKPLALDEFVFLRDVAAATPKITLPAPSTMHFYRCTDFADAAAY
                     ATAESFFADLIRIYREEIAALADAGCRYIQLDEVALALLCDPAIRAKVEEAGAEPDRL
                     VDLYIETLNAALSGAPPDVIFGIHMCRGNFKGHYLGSGGYESVAERFFARARVNHFLL
                     EYDTARAGDFRPLRFVKDKGVVLGLISSKTPALESIADLKRRAEEAARYIDLDRLAIS
                     PQCGFASTVAGNPITETDERAKLKLVVDAAEEIWH"
     gene            4623..5375
                     /locus_tag="VNY79_07120"
     CDS             4623..5375
                     /locus_tag="VNY79_07120"
                     /inference="COORDINATES: protein motif:HMM:NF019958.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HWX72252.1"
                     /translation="MKPKSSSSRKASAPAAGRPQIRKARRAAARAPGVLGAGSRNTHR
                     RSPEIIDAAARVFAEHGYHGATTEDIADRIGIRQASLYYYLPSKEVALEIVCTRGVEG
                     FFKAAQAIAAGPGSAEEKLTSLVRAHISPILDRGDFVKVFLTQRQFLPHKSRRRVGKW
                     SRAIERLFERVVREGARKGRFRADVDPRLATLAILGMANAVAGWYGKEKASIERIGSE
                     FTKLILAGLAPVAGGARSTNRHRKIQSTHRIR"
     gene            5413..>6917
                     /locus_tag="VNY79_07125"
     CDS             5413..>6917
                     /locus_tag="VNY79_07125"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HWX72253.1"
                     /translation="MGSAVGAIAVTADALRRTTAPTLLCALAHDCPERVAFRSKHRGI
                     YRERTWRDYALLVARTAKAFAELGLQTGERIAIMGESCEEWVICDLAAQSLGAIVYGV
                     YPTASAAEVEYQMRDGSAVLFVAEGQEYADRILPLVEQLPDLRHIVVIDDSAMFSYDH
                     AKLRSYRALLAGAEGELDWLEGRVQRLSPADPAFIVYTSGTTGHPKGALVAHGKHLAA
                     AGNLVEHYRTLREKSHRTVAYLPLCHILGRDVAITLPMISQLVPHFGDDAGDVAATIF
                     EVAPTVLFTVPRYLQKFAAQVLVGIGNSSKLKRASYALAMQLARRHVRRRWNGGSGFA
                     GMPYAIGQALVFRPILNKLGFDQLKLVICGGAPLSPESMALWQMYGVNVVEIYGQTEA
                     AGGIVSGQRGPFPAPGNVGAPPSGWNVRLAEDGEVLVHSADLFEGYWRNDEATRAVKI
                     ADGWLRTGDIGEWDKRGALRLVDRARDFIVTAGGKTLSPSFIENALRASPYV"
BASE COUNT         1082 a         2254 c         2241 g         1340 t
ORIGIN      
        1 cactacgaca acgattttag ctcattggcc catgttggca agaacaatgt ggcttgagca
       61 tggactgtgg ctgtcttgtc gcagcgaacg cggctcgatc agtcccaatt gcaacaaact
      121 tgatttcgag agcgtcgtgc aactgaactt tgttgccggc gatccaacaa cgatgacagc
      181 cgctaggtgg cgctccctgg gccgacaatg tttctttggt atttgcgtgc tcgcgataca
      241 acagtttttc tggtctgcga ccgcttggtt tgaggttttc agcttgccga ttgcttagga
      301 cgagaaatca ggaaacagtg acgccacgcg acgcctgcag catcaaccaa atgattcgtc
      361 acaaatcgtg aggtcctgtg aaaccggcag cagaacgaca gctccgtcgt gctgcttcca
      421 aaaagcagtc gacagcgttg tctgcccgat gcgggcgtcc atgatccttg aatttgcgac
      481 gacggttcaa tcgcgcccgc tctcagcatg cgtttgatgc acgccgattt ggcgtgttgg
      541 tcggcatggg agtggttttc gcgacggtga aacgggaggg cgggcgaagt aagccatcga
      601 cgccgtgtct ttgcaggcgc cttgctatgc aaatcttatt ggctgtgaca acaatgtgct
      661 taccttgagc cttaccgact atgatcgggc gcgcggcgcg cctgcgtgct tccgcgatgg
      721 atcgacaacg atgggggaat gccaatgacc cgcaaatcag gccgcacatt gtcgccgcct
      781 gccgcccgcc cggcatgaac tgcgggcttc gctggtgccg ctcgccgtct acctgaatgt
      841 tgccgtcggc ggcgttttga ccggcctcgt ctacggcctg atggcgctcg ggctttcggt
      901 catcttcggc gtggttcgcg tcgtcaactt cgcccatggc gagatgatga cggttgcgat
      961 gttcatcgcc gtggtgctgt tctcctggtt ccatctcgac ccgctgatca tgctggtgcc
     1021 gatcgccgcg gtgctgttcg ctttcggcta cgcgctgcag gcgtcgctga tcaacccgtt
     1081 catcacccgg cccgagcaca gccagtttct gctgctggtg gcgctggcga tcatcatcgc
     1141 caacgcgctc ttgatcatgt tcggcccgga cgcgcggtcg gtgcagacct cctacgccta
     1201 tgacagcttc cagctcggcc cgctgatcgt tgacgcggcc aagctctatg ccggtgccgc
     1261 cgcgatcatg ttcacggccg cgctgttcgc cgtcttccgc ttcacccctg tcggcaaggc
     1321 gatccgcgcc tgcgccgaca actacaccgg cgcgctcgtg gtcgggctcg acgtgaccca
     1381 cctctacgcg ctcaccttcg ggcttggcgc ggcctgcgtc ggggccgccg gcaccatgct
     1441 ggtgctgctc atcgacccaa cgccgatgct cgggccgggc tatacgctct tggccttcgt
     1501 catcgtcatc accggcgggc tcggctcgat gcccggcgcg ctcgtcggcg gcgtgctgat
     1561 cggggtcacc gaggcgctcg ccggcctgct gttcacgccc tcgctcaaga gcatgttcgc
     1621 cttcgccatt ctcgtgctgg tgctgctgtt tcgcccgcag ggcattctcg gccggaggct
     1681 ggcgtgatga ggcgagcgtg atgtcgggcc tgtccgccgg gctctcgcgc cgccgcgccg
     1741 cgctgctcac tctcctgctg gcggcgctcg tggccgcccc atggctcgtc aacgactatc
     1801 tgctcaccgt cctcatcctc attctgtatt tcgcctatgc cgggcaggcc tggaacgtca
     1861 tgatgggctt cgccgggcag ctttcgcttg gccatgcgct ctatgtcggg ctttccggtt
     1921 atgtcgcggc gatgctgttc acccggctcg gcgtcggccc atggctgggc ctcctcgccg
     1981 ccattcccct cgccgccgcc tgcggcgcgg tcatcggcta tctcgccttc cgcttccgcg
     2041 ttgccggcgt ttatttcgcc atcctgacca tcgccttcgc cgagttcgcc cgcatcggct
     2101 tcgacaattg gggcttcgtc aatggttcga gcggcctgtt cctgccggtc acgcaatatg
     2161 agcacaacga cctgtggctg ctgcgcggcg cgccggcgat gttctactat gtgatcctcg
     2221 ctgcgaccgc gctcgtcttc gtgctctgcc acttcctcgt tcgcagccgt atcggctatt
     2281 tctggctcgc catccgcgag gacgaggaag ccgcgcgcgc cgtcggcatc gacaccttcc
     2341 gctacaagat gtacgcggtg atggtctccg ccgccgtcac ctcgtttgcc ggcgtgttct
     2401 acgcattctt ttacaacaac ctgtttccgg agcaggtgtt cagcatttcc cggtcgatcg
     2461 agatcatcct cggaccgatc atcggcggca tcggcacgct gttcgggccg atcctcggag
     2521 cgttcgtgct tactgggctg gcggaagcgc tcaatgccgt gatgggcgcc ttcggcctcg
     2581 aactgccggg agcaaagcag gtgttttatg gcgtgtgcct gctgctggtg gtcgtggcat
     2641 tgccggatgg ggtgtggccg ccgctcgcgc gccggcttgg cgtcgcggag cgcaagccat
     2701 gaccgcgctc ctcacgctcg agcgcgtgag caagcgcttt cgcggcctca ccgccgtcga
     2761 caatgtcagc ttcgccgtgc cggcgggcgt gatcttcgcc gtcatcggcc ccaatggcgc
     2821 cggcaagacc acgctgttca acatgatcgc ggggacgctg gctccggacg gcggcgcgat
     2881 cacctttgcg ggaaacccga tcgaagggtt gtcggcggac gccgtctgcc ggcgcggcgt
     2941 cgcccgcacc ttccagatcg tgcggccgtt tccggcgctg accgtcgagg acaatgtcac
     3001 catcggcgcg ctgctgcacc ggcacgatgt cggcgccgcg cgacagcggg cgcaggagct
     3061 gctgcggcgc ctcgacctat tcgacaagcg ccagcggctc gcctcgacgc tgacgctgcc
     3121 ggaccgcaag cggctcgaag tcgcgcgcgc gctcgccacc gggccgcggc tgctgctgct
     3181 cgacgaggtg atggccggcc tgcggccgac cgagaccgac cgcatggtcg cgattctgcg
     3241 cgagctcaat cgcgacggcg ggttgaccat cctgctgatc gagcacgtga tgcgcgcggt
     3301 gatggcgctc gcctcgcacg tgctcgtgct cgatcacggc gtcgccattg ccgagggcac
     3361 gcccgatgcg atcgtgcgcg atccggcggt cgtgcagtcc tatctcggcg ccgaggcggt
     3421 gtaggcggcc gagcggcctg cggggccgcg accgcgagcg acggcggcgt cggtcaatgc
     3481 cagatttcct cggcggcatc gacgacgagc ttgagcttgg cacgctcatc cgtttcggtg
     3541 atcgggttgc cggcgaccgt cgaggcaaat ccgcattgcg ggctgatggc gagccggtcg
     3601 agatcgatgt accgggccgc ttcctcggcg cggcgcttga ggtcggcgat gctctccagc
     3661 gccggcgtct tgctgctgat gagcccgagc acgacgccct tgtccttgac gaaacgcagc
     3721 gggcggaaat cgccggcccg cgccgtatcg tattcgagca gaaaatgatt gacgcgggcg
     3781 cgggcgaaga aacgctcggc gaccgactcg tagccgccgc tgccgagata gtggcccttg
     3841 aaattgccgc ggcacatgtg gatgccgaag atcacgtccg gcggcgcgcc ggacagggct
     3901 gcgttcaagg tctcgatata gagatcgacc agccggtcgg gttcggcgcc ggcctcctcg
     3961 accttcgccc gaatggcggg atcgcacaga agcgccagcg ctacctcgtc gagctgaatg
     4021 taacggcagc cggcgtcggc aagcgcggcg atctcctctc gatagatgcg gatgaggtcg
     4081 gcgaagaagc tctcggccgt ggcgtaggcg gcggcgtcgg caaaatccgt gcagcggtag
     4141 aagtgcatgg tcgacggcgc cggtaacgtg attttcggcg ttgccgcggc gacgtcgcgt
     4201 aggaaaacga actcatcgag cgccagcggc ttggaacggg aaagtctgcc cgccgcatac
     4261 gtcgccgtga agtcgacctc gtggccgtgg tcgtcgcgga atttgaatgc cgccggcctg
     4321 atcacgaaac cctcgatccg ctcgacgaag cgtccccaat acgagccgcg ccgaaactcg
     4381 ccatcggtga ctacccgaaa gcccgccgct tcctgcagcg caaccacgtc gcggatgcag
     4441 cgatccagta tttgtgcaaa atattccccg tcgatgcgtt tcgcctggtg gtccttgtac
     4501 gcctgccgca gttcgggtgg ccgcaacagg ctgccgacgt ggtcggcgcg gaatggaggc
     4561 cggccattgg ggcgcgcgag catcgatatc ctcccgggcg aaattattct atagatttat
     4621 agatgaaacc taaatcatcg tcttcgcgaa aggcaagcgc ccccgccgcc ggccgcccgc
     4681 agatacgcaa ggcgcggcgt gctgccgcgc gcgcgccggg cgtcctcggc gccggctcgc
     4741 gaaacactca tcgccgttcc cccgaaatca tcgatgcggc agctcgcgtc tttgccgagc
     4801 acggctatca tggcgcgacg acagaggaca tcgccgaccg catcggcatc cgccaggcga
     4861 gcctgtatta ttatctgccc tccaaggagg tggcgctgga aatcgtctgc acgcgcggcg
     4921 tcgagggttt cttcaaggcc gctcaggcga tcgctgccgg gccgggcagc gccgaagaga
     4981 agcttaccag cctggtacgc gcccatattt cgcccattct cgaccgcggc gatttcgtca
     5041 aggtgttttt gacccagcgc cagttcctgc cgcacaagag ccgtcggcgc gtgggcaaat
     5101 ggtcgcgcgc catcgaacgt ttgtttgaac gcgtggtccg cgagggggcg cgcaagggaa
     5161 ggtttcgcgc cgatgtcgac ccgcggctgg cgacgctcgc gattctcggt atggccaacg
     5221 ccgtcgccgg ttggtacggg aaggagaagg cgtcaattga gcggatcggc agcgaattca
     5281 ccaagctgat cctcgccggt ctggcgccgg tcgccggtgg cgcgcgcagc accaacaggc
     5341 accgcaaaat tcaatcaacc catagaattc gatagagccg ccggctatag tgacgaaagg
     5401 gaacgctcga tcatgggcag cgccgtggga gcaattgcgg ttactgcgga cgccttgcgg
     5461 cgaacgacgg cgccgacgct cctttgcgcg ctggcgcatg actgcccgga gcgcgtcgcc
     5521 ttccgctcca agcatcgcgg catctatcgt gaacggacat ggcgcgacta cgcgcttttg
     5581 gtcgcgcgca ccgccaaggc gtttgccgag ctcggcctgc agacgggcga gcgcatcgcc
     5641 atcatgggtg agagctgcga ggaatgggtg atctgcgatc tggcggcgca atcgctcggc
     5701 gcgatcgtct acggcgtcta tccgaccgcc tccgccgccg aagtcgaata tcagatgcgc
     5761 gacggcagcg ccgtcctgtt cgtcgccgag ggccaggaat acgccgaccg gattctgccg
     5821 ctcgttgagc agctgcccga cctgcggcac atcgtggtca tcgatgattc cgcgatgttc
     5881 agctatgacc atgccaagct cagaagctat cgggcgttgc tggccggcgc cgagggtgag
     5941 ctcgattggc tcgaggggcg ggtccagcgc ctgtcgcctg cagacccagc cttcatcgtc
     6001 tacacctccg gcacgaccgg acatcccaaa ggcgcgctgg tcgcccacgg caagcatctc
     6061 gccgcggcgg ggaatctcgt ggagcactac cgaacgctgc gcgagaagtc gcaccgcacc
     6121 gtcgcctatc tgccgctctg tcacattctc ggccgcgacg tcgcgattac gctgccgatg
     6181 atctcgcagc tcgttccgca tttcggcgac gatgccgggg acgttgcggc gacgatattc
     6241 gaggtggcgc cgacggtgct gttcacggtg ccgcgctatc tgcagaaatt cgcggcccag
     6301 gtcttggtcg gcatcggcaa ttcgtcgaag ctcaagcgcg cgagctacgc gctggcgatg
     6361 caattggcgc gccggcatgt gcgccggcgc tggaacgggg gctccggctt cgcgggaatg
     6421 ccctacgcaa tcggccaggc cctcgtgttc cggccgatcc tgaacaagct cggcttcgat
     6481 caactgaaac tggtcatctg cggcggcgcg ccgctgtcgc cggagagcat ggcgctctgg
     6541 caaatgtacg gcgtcaacgt cgtcgaaata tacggtcaaa cggaggccgc gggcgggatc
     6601 gtcagcggcc agcgcggacc gtttcccgcg cccggcaatg tcggcgcgcc gccttcgggc
     6661 tggaacgttc gcctggcgga ggatggcgag gtcctggttc acagcgccga tttgttcgag
     6721 ggctattggc gcaacgacga agcaacgcga gcggtcaaga tcgccgacgg ctggctgcgc
     6781 accggcgaca tcggcgaatg ggacaaacgc ggagcgctgc ggctcgtcga ccgggcgcgc
     6841 gacttcatcg tgaccgcggg cggcaagacc ttgtcgccct cgttcatcga gaatgcgctg
     6901 cgcgcgtcgc cgtatgt
//
LOCUS       DATMQB010000233         5422 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2557741, whole genome shotgun sequence.
ACCESSION   DATMQB010000233 DATMQB010000000
VERSION     DATMQB010000233.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5422
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2557741"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1259
                     /locus_tag="VNY79_07130"
     CDS             <1..1259
                     /locus_tag="VNY79_07130"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HWX72254.1"
                     /translation="LAALPAQDRPALRCVIGLEPPAGITEVAGLPVLPLYRDATADAG
                     PDEAAGETPCLTFTTSGTTSGPKLVLHDQQTIAGHAADVARRIGLDTADAALLAAAPL
                     CGTFGNAAAMAAFAGGAHVVCLAQFDAEAAVGLIRKHRITHLFGGDDMFGRIAAASGG
                     RRFDSLRFSGFAAFHSNAAASVAAAEAAGMHPHGLYGSSEVQALFSVSDGESRLVSGG
                     VPVNAGARLAVRDPHTGAKLPAGASGELWIDAPSRFVEYLEDPAATARVFDADGMFRT
                     GDLGRLAGDGFVFEARIGDAMRLGGFLVSPEEIEAVIQAQPGVAGVQVVAASNGESDP
                     VPVAFVRPAAGTALDEAALRARCREQLARFKVPARIVAVDAFPTVDGPNGPKVQRVRL
                     REMAQTLLREEERGRRRDAGAGLHQH"
     gene            1303..2319
                     /locus_tag="VNY79_07135"
     CDS             1303..2319
                     /locus_tag="VNY79_07135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HWX72255.1"
                     /translation="MSDQLSTYVALTGNLQTLLVRLGIGNLRQGSLQRLTGGASKETW
                     AFDAVGPAGAVPLIMRRFSADAVPSDSVINPETEAFLIRRAGECAVPTPGIRHILEPG
                     DDLGRGFLSDRIEGETLARRILRNPEFAEIRTELAFECGAILARIHAVPREDLPPLKT
                     RFAAGQLYELYESYQSFGGGSAVFEAAFRWLREHMPADAETPRLVHGDFRNGNLIIGV
                     DGIRAVLDWELAHLGDPAEDLGWITVNSWRFGEIDKPVGGFGSVEDMLEGYRFEGGEA
                     IDAQTVRYWRTLGTLRWGLICRSMARPARPGAPLTVERAMIGRRISETELDLLDILAA
                     EGVR"
     gene            2316..2729
                     /locus_tag="VNY79_07140"
     CDS             2316..2729
                     /locus_tag="VNY79_07140"
                     /inference="COORDINATES: protein motif:HMM:NF040046.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6285 domain-containing protein"
                     /protein_id="HWX72256.1"
                     /translation="MNGHPPATELLASVSRFLRDELLPTLSGAEAFNLRVSINAIDLV
                     SREIEQQDAADKREHRRLAKLLDSYAELDVLRKQLCEKIARGDIMLDQPALREHLHAT
                     IIDRLAIDQPTYSAYLAAIARRRPAEAGGNETAEE"
     gene            2750..4048
                     /locus_tag="VNY79_07145"
     CDS             2750..4048
                     /locus_tag="VNY79_07145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018315640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX72257.1"
                     /translation="MNFDLPRALTDYLGRLDAFIDAEIRPLEAADDNIRFFDHRREWA
                     RTDFEHGGLPRPEWEALLRQAKKLADKAGHYRFALPKKYGGSDGSDLWMAVIREHFAT
                     QGLGLHNDLQNEHSIVGNLPFVTMLDLYGRPEQRAMIEGSITGEYRITFGLTEPDHGS
                     DATHMETRAVRTAQNGVPGWLINGKKMWTTGMHVATHCALFARTSGKDGDAHGITCFL
                     VPADREGVNVEEYLWTFNMPTDHPRVGFTDVFVAEDALFGELGKGLSVAQCFVHQNRI
                     RQAASSLGAAVYCINESVAYARRRKPFGRALAENQAIQWPLVELATQAEMLRLLIRKT
                     AWEMDQATQEEIEHKLSDKVSMCNYWANRLCCEAADRAMQVHGGIGYSRHKPFEHIYR
                     HHRRYRITEGSEEIQMRKVAGFLFGFMGPRRGKKEPGATN"
     gene            complement(4105..>5422)
                     /locus_tag="VNY79_07150"
     CDS             complement(4105..>5422)
                     /locus_tag="VNY79_07150"
                     /inference="COORDINATES: protein motif:HMM:NF014500.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="GntP family permease"
                     /protein_id="HWX72258.1"
                     /translation="AASAFVLIVATQARHLHPFVAIVFIASAFGLAAGFSVGFLGKAF
                     GVGFSRAMYAPGLVIVAAGLVTALAEGTGAGDRLMAKINGWRRPGAARIAALLGLVAG
                     SAASPAAAFAVLTPLIRPIGGVKPSSREAATTALALAISASQGVVVLAPVPIAAAAIL
                     DAAWGRVALFGLPLAVLLAAFGAAWARWIAAFGAASVSPAPESHPVAEKQGGGSAVVL
                     LLATAIPLMMLIVQSIGDIPSEPLGGGAAREMILGVGRPLILFLVGVGLMAIGHGRQS
                     LKLLFDSGWSGRVLGNVAGIVMIVGAAGGLQRLCQETGMAELLGERLLAWPAGLLVPF
                     LIAAVMKSLQGSSLVAAIATAGMVQPLLTPLGIGDENGRALATLAVGAGAMTVSHVND
                     EYFWLVAAGGGLSTLRALAAVTVGTLLQGFAAVAMLLVLSTLAALL"
BASE COUNT          938 a         1885 c         1812 g          787 t
ORIGIN      
        1 tcctcgccgc cctgcccgcg caggatcgcc ccgcgctgcg ctgcgtgatc gggcttgagc
       61 ctcctgccgg catcaccgag gtcgccggcc tgccggtgct gccgctttac cgcgatgcaa
      121 ccgccgatgc cggccctgac gaggccgcgg gcgaaacgcc ctgcctcacc ttcaccacct
      181 ccggcacgac cagcgggccg aagctcgtcc tgcacgatca gcaaaccatc gccgggcacg
      241 ccgccgacgt cgcccgccgc atcggcctcg atacggccga cgcggcgctg cttgccgcgg
      301 cgccgttgtg cggcaccttc gggaatgccg cggcgatggc tgcgttcgcc ggcggcgcgc
      361 atgtcgtctg cctcgcccag ttcgatgccg aggcggcggt cgggctgatc cgcaagcacc
      421 gcatcactca cctgttcggc ggcgacgaca tgttcggccg catcgccgct gcttccggcg
      481 ggcgccggtt cgactcgctg cgtttttccg gtttcgccgc gttccactcg aacgctgccg
      541 cctcggtcgc cgccgccgag gccgcaggca tgcacccgca cggactttac ggcagttcgg
      601 aagtgcaggc gctgttctcc gtctccgatg gcgagagccg cttggtgagc ggcggcgtgc
      661 cggtcaacgc aggggcgcgg cttgcggtgc gcgatccaca caccggagcg aaattgccgg
      721 ccggcgcctc cggcgaactc tggatcgacg ctccgtcccg cttcgtcgaa tatctggaag
      781 acccggccgc gaccgcccgc gtgttcgacg ccgacggcat gttccgcacc ggcgatctcg
      841 gccggctcgc tggcgacggc ttcgtcttcg aagcgcggat tggcgacgcc atgcggctcg
      901 gcggcttcct ggtgagcccg gaggagatcg aggccgtcat ccaggcacag ccgggcgtgg
      961 ccggcgttca ggtggtggcg gcctcgaacg gcgagtccga cccggtgccg gttgccttcg
     1021 tgcggccggc cgcagggacg gcgctcgacg aggcggcgtt gcgggcgcgt tgccgcgagc
     1081 aattggcgcg gttcaaggtg cccgcacgca ttgtagcggt cgatgcgttc ccgaccgtcg
     1141 acggcccaaa tggtcccaaa gtccagaggg tgcggctgcg cgagatggcc cagacgctgc
     1201 tgcgggagga agagcgtggg cggcggcgcg acgccggtgc aggattgcac cagcactagc
     1261 gatggtcgat cgtagtggag actccggccg gaccgcgcgc tcatgagcga tcagttgagt
     1321 acctatgtcg ccctgacggg caatcttcag accctcctcg tccgtctcgg catcggcaat
     1381 ctccggcagg ggtcgctgca acgcctcacc ggcggcgcca gcaaggagac gtgggcgttc
     1441 gacgccgtcg gccccgccgg cgccgtgccg ctgatcatgc gccgcttctc cgccgacgcg
     1501 gtgccgagcg acagcgtcat caatccggaa accgaggcct tcctgatccg ccgcgccggc
     1561 gaatgcgcgg tgccgacgcc gggcatccgc cacatcctcg aaccaggtga cgacctcgga
     1621 cgcggcttcc tctcggaccg gatcgaaggg gaaacgctcg cgcgccgcat cctgcgcaat
     1681 cccgagttcg ccgagatacg caccgagctc gccttcgaat gcggcgccat cctcgctcgc
     1741 atccatgcgg tgccgaggga ggatctgccg ccgctgaaga cccggtttgc ggccggccag
     1801 ctctacgaac tctacgagag ctaccaatcc ttcggcggcg gcagcgccgt attcgaggcg
     1861 gcatttcgct ggttgcgcga acacatgcct gccgacgccg agacgccgcg gctcgtccac
     1921 ggcgacttcc gcaacggcaa cctcatcatc ggcgttgacg gcattcgcgc cgtgctcgac
     1981 tgggagcttg cgcatctcgg cgacccggcc gaggatttgg gctggatcac ggtcaacagc
     2041 tggcgcttcg gcgagatcga caagccggtc ggcggcttcg gcagcgtcga ggacatgctg
     2101 gaaggctatc gcttcgaagg cggcgaggcg atcgacgcgc agacggtgcg ctactggcgt
     2161 acgctcggca cgctgcgctg ggggctgatc tgccgctcca tggcgcggcc ggcgcggccg
     2221 ggcgcgccgc tcaccgtcga gcgcgcaatg atcgggcggc gtatttccga aaccgagctc
     2281 gacctgttgg acattctggc tgccgaaggt gtgcgatgaa cgggcatcct cctgcgaccg
     2341 agttgctggc gtcggtgtcg cgctttctgc gcgatgaact gttgccgact ctgagcggcg
     2401 ccgaggcgtt caacctcagg gtcagcatca acgccatcga tctggtgagc cgggagatcg
     2461 agcagcagga cgccgccgac aagcgcgagc atcgccgcct cgccaaactc ctggacagct
     2521 atgccgagct cgacgtgctg cgcaagcagc tgtgcgagaa gatcgcgcgc ggcgacatca
     2581 tgctcgatca gccggcgctg cgcgagcatc tgcacgcgac catcatcgat cggctcgcca
     2641 tcgatcagcc gacctactca gcctatctcg cggccatcgc caggcggcgt cccgccgagg
     2701 cggggggcaa tgaaacggcg gaggaatagc cttgccatcg aacgcggaca tgaacttcga
     2761 tctcccgcgc gcgctgaccg actacctcgg ccggctcgac gccttcatcg acgcggagat
     2821 ccgcccgctc gaagcggccg acgacaacat ccgcttcttc gatcatcggc gcgaatgggc
     2881 gcggaccgat ttcgagcacg gcgggctgcc gcgcccggaa tgggaagcgc tgctgcgcca
     2941 agccaagaag ctcgccgaca aggccggcca ctatcgcttc gccttgccga agaaatacgg
     3001 gggcagcgac ggctcggacc tgtggatggc ggtgatccgc gaacacttcg ccacccaggg
     3061 tctcggcctg cacaacgacc tgcagaacga gcactcgatc gtcggcaatc ttccgttcgt
     3121 gaccatgctc gacctttatg ggaggcccga gcagcgggcg atgatcgagg gcagcatcac
     3181 cggcgaatat cgcatcacct tcggcctgac cgagccggac cacggctccg acgcgacgca
     3241 catggaaacc cgcgccgtgc gcacggcgca aaacggcgtc cccggttggc tgatcaacgg
     3301 caagaagatg tggacgaccg gaatgcacgt cgccactcat tgcgcgctct tcgcccgcac
     3361 ctcggggaag gacggcgacg cccacggcat cacctgcttt ctcgtgccgg ccgaccgcga
     3421 gggcgtcaac gtcgaagagt acctgtggac cttcaacatg ccgaccgatc atccgcgcgt
     3481 cggcttcacc gacgtgttcg ttgccgaaga cgcgctgttc ggcgagctcg gcaagggcct
     3541 gtcggtggcg cagtgcttcg tgcaccagaa ccgcatccgg caggcggcga gctcgctcgg
     3601 cgcggcggtt tattgcatca acgagagcgt cgcttacgcc cgtcgacgca agccgttcgg
     3661 gcgggcgctc gccgagaacc aggccatcca gtggccgctg gtcgagctcg ccacccaggc
     3721 cgagatgctg cggctcctca tccgcaagac cgcctgggaa atggaccagg cgacgcagga
     3781 ggagattgag cacaagctct ccgacaaggt gtcgatgtgc aattattggg cgaaccggct
     3841 gtgctgcgag gcggcggatc gcgccatgca ggtgcacggc ggcatcggct actcgcgaca
     3901 caagccgttc gagcacatct atcgccacca ccggcgctac cgcatcaccg agggttcgga
     3961 ggagatccag atgcgcaagg tcgccggctt cctgttcggc ttcatggggc cacggcgcgg
     4021 aaagaaagag ccgggcgcga cgaactgacg aacgcgcaac ggccggcctt cgccggtcta
     4081 ccgctggcgg cgacgaaatt tccctcagag aagggcggcc agcgtcgaca gcacgagaag
     4141 catcgccacg gcggcgaagc cctggagaag cgtgccgacg gtgacagcgg ccagcgcccg
     4201 caacgtcgaa agcccgccgc cggcggcgac cagccaaaaa tactcgtcat tgacgtggga
     4261 gacggtcatg gcgccggcgc cgacggcgag agtggcaagc gctcttccgt tctcgtcgcc
     4321 gatcccgagc ggcgtcagta ggggctgcac catcccggcg gtagcaatgg cggcgaccag
     4381 ggacgaaccc tgcagggact tcattaccgc cgcgatcagg aacgggacca gcagcccggc
     4441 gggccaagcg agcagacgct cgccgaggag ctctgccatc ccggtctcct ggcagagccg
     4501 ctgcaggccg ccggcggcac ctacgatcat gacaatgccc gcgacattgc cgaggacgcg
     4561 cccactccag ccggaatcaa aaagaagctt gaggctttgc cgcccgtggc cgatcgccat
     4621 gaggcccacc ccgaccagaa agaggatcag cggacgaccg actccgagga tcatctcgcg
     4681 ggccgccccg ccaccgagcg gctcgctcgg aatgtcgccg atggactgga cgatcagcat
     4741 catcagcggg atcgccgttg ccagaagcag cacgaccgcg gacccgccgc cttgcttctc
     4801 cgcaacggga tgcgattccg gcgcgggcga taccgatgcg gcaccgaaag ctgcgatcca
     4861 ccgcgcccag gccgccccga aagccgccag cagcaccgcg agcggcagcc cgaaaagcgc
     4921 cacgcggccc catgcggcat cgaggatggc tgccgccgca atggggaccg gcgcgagcac
     4981 cacaacaccc tggcttgccg agatcgcaag cgccagcgcg gtcgttgccg cctcgcggct
     5041 ggacggcttc acgccgccga tcggccgaat gagaggcgtg agcactgcaa aggcggccgc
     5101 cggcgatgcc gcgctaccgg cgaccaagcc cagaagcgca gcgatcctcg cggccccggg
     5161 tcgccgccaa ccgttgattt tggccatgag acgatcgccg gcgcccgtcc cttcggcgag
     5221 agcggtgacg aggcccgcgg caacgatcac cagtccgggc gcatacatgg ccctggagaa
     5281 gccgacgcca aaagccttgc cgagaaagcc aacggagaaa cccgcggcca aaccaaaagc
     5341 tgaggcgatg aacacgattg cgacgaacgg atggaggtgc cgcgcttgcg tcgcgacgat
     5401 gagaacgaac gcagatgccg cg
//
LOCUS       DATMQB010000234         6708 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1629313, whole genome shotgun sequence.
ACCESSION   DATMQB010000234 DATMQB010000000
VERSION     DATMQB010000234.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6708)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6708)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6708
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1629313"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..193
                     /locus_tag="VNY79_07155"
     CDS             <1..193
                     /locus_tag="VNY79_07155"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72259.1"
                     /translation="TRDDAERLHLLITRHARFTGFRLAAKILAEWKIYCPLFRKVMPV
                     EYRRALAEMEKARTMQAAE"
     gene            200..565
                     /locus_tag="VNY79_07160"
     CDS             200..565
                     /locus_tag="VNY79_07160"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72260.1"
                     /translation="MRALSALIGVLAAAGLAEPAAVQANPGCIQCRALAHFRTCDRPL
                     DGSIAIRGTVAGVDETPCSQVLVLDVSRTSAAPVPGRIWVDLGGCAIGEGKPADAIDV
                     AVRKPRSDNSRYALACRHW"
     gene            568..2010
                     /locus_tag="VNY79_07165"
     CDS             568..2010
                     /locus_tag="VNY79_07165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HWX72261.1"
                     /translation="MGKVTGFLEYERNDRDYEPVEERVRHSREFILPLKDDEYRIQAA
                     RCMNCGVPYCQGTGSLAPGTPGCPVNNQIPDWNDLVYTGNWDEAARNLHSTNNFPEVT
                     GRVCPAPCEASCTLNIDENPVTIKSIECAIADRAIAQGLKPEPATDRTGKRVAVVGSG
                     PAGLACAQQLARAGHEVHVYEKYARAGGLLRYGIPDFKMEKHHVDRRVAQMEAEGVVF
                     HYNVHVGVNLAADKLLADHDAVVLAGGAEKARDLPVPGRELRGIHFAMDFLPQQNRRV
                     SGEPAATGETILAGGKHVVVIGGGDTGSDCIGTSFRQGALSVTNFEILPEPPEQENKM
                     LTWPNWPLKLRTSSSHEEGAERDFAVMTTRFAGANGFVNTLQCVHVDDRMKPMPGSEF
                     EIAAELVLLAMGFVHPVHEGLVKDLGLALDQRGNVRASTDDYRTSIDKVFAAGDLRRG
                     QSLVVWAIREGRQAAHAVDKFLMGSTLLPR"
     gene            2247..2558
                     /locus_tag="VNY79_07170"
     CDS             2247..2558
                     /locus_tag="VNY79_07170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72262.1"
                     /translation="MRYDFNVLEKRAKQLLVENRPADAIKIYLFMADGDQSLDAGYLG
                     LKIGQCYERMNDLHAAKYWYGRALEEDAPIARAESVEGRNRSEHVTIDDIIAPEEYTI
                     P"
     gene            complement(2863..4452)
                     /locus_tag="VNY79_07175"
     CDS             complement(2863..4452)
                     /locus_tag="VNY79_07175"
                     /inference="COORDINATES: protein motif:HMM:NF024863.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016788 - hydrolase activity, acting on
                     ester bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH family hydrolase"
                     /protein_id="HWX72263.1"
                     /translation="MTARRAGRMGRRLASALVLAATGGALFAASADAQLFERRQDFFP
                     FSLFGDRGPPPPSVFPGFRGIPPPPSEGAKAPPPRKAETPPTSTVLVIGDSLADWLAY
                     GLEEALTDTPEIGVVRKIRPLSGLVRYEARNEAIEWPQAVKEMLAGEQPGVIVVMLGL
                     NDRQALRERINPKPQKQETAAPAQGQGEATPAPSGSEPAQQSSGEPAAQPAPPAAAAA
                     PPSEPARPAQMVNYEFHTDKWTEAYTKRVDEMIVALKAKGVPVLWVGLPALRTRTNSD
                     ITYLDEIYRARAARAGIVYVDVWDGFVDDQGRFAVQGPDFEGQIRRLRAGDGVHFTKA
                     GAVKLAHYVEHDLRRVMSNRPVPVALPGTDEQAPKALGGTARAAVGTVVPLNAGAAET
                     GDLLGAVGTPAPGGAAADPMAARVLSRGDAIPAPPAGRADNFSWPRAGATANISNEVE
                     IVPAAPAPAPTAQPAAAAAKVAPGKSVAKKPEKPETKPDAKKEAAPETPPLRSPRRSR
                     ADLDGAIRPPSPIGPAAPNVR"
     gene            complement(4617..5978)
                     /locus_tag="VNY79_07180"
     CDS             complement(4617..5978)
                     /locus_tag="VNY79_07180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HWX72264.1"
                     /translation="MPISAPIFRRAAATLLAAAFAGPTLAQETSDNWLTRLFQPPAAN
                     SVPAPAAAPASAREWSGQSGASGHPLMTAEAIRAAAAEFGDCLAGLWPLAARRGVARE
                     TFEGYTAGLTPDLRLMDLLDAQPEFTKSTWDYLDALVSDERIARGREILAQHAPTFAA
                     VERTYGVDRHVIAAIWGVESKYSTMGGDRSVIRSTATLACVGRRRDFFREEFLSALEI
                     LQRGDLKPERLIGSWAGAFGPTQFMPTTFKRYAVDFDGDGRRDVVDSVPDMIASTANN
                     LKTDGWASGEGWGYEVVLPQNFDFLLADRSRQMTLRQWQALGIARAGGQAFPRPSDRA
                     YLLVPAGARGPAFLMLQNFRVIMKYNPAEAYALAIGHLSDRLRGGGPLLQAWPREERP
                     LTVAERYELQQLLGQRGFDIGEPDGRIGPRTRIAIRNFQVTTGQIPDGFPSSHVLDRL
                     RQP"
     gene            6359..>6708
                     /locus_tag="VNY79_07185"
     CDS             6359..>6708
                     /locus_tag="VNY79_07185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate nucleotidyltransferase"
                     /protein_id="HWX72265.1"
                     /translation="MKLVRKAVFPVAGLGTRFLPATKAMPKEMLPVVDRPLIQHVVDE
                     ARQAGIEHFIFVTGRNKGVIEDHFDRQFELEMTLLERQKHEALDFLRQELPQPGTTSF
                     TRQQEPLGLGHAVW"
BASE COUNT         1168 a         2190 c         2234 g         1116 t
ORIGIN      
        1 gacccgcgac gatgccgagc ggctgcacct cctgatcacg cggcacgcgc gcttcaccgg
       61 cttccggctg gccgcgaaga tcctggccga gtggaagatc tattgcccgc tgttccgcaa
      121 ggtcatgccg gtcgaatacc gccgcgcgct cgccgagatg gagaaggctc gcacgatgca
      181 ggcggcggaa taggcgccga tgcgggccct gtcggcgctg atcggcgtgt tggccgcggc
      241 tggtctcgcc gagccagcgg cggtgcaagc aaatcctggg tgtatacagt gccgggcgct
      301 ggcccatttc cgcacctgcg accggccgct cgacggcagc atagccatcc gtggcaccgt
      361 ggccggcgtc gatgagacgc cctgctccca ggtcctcgtg ctggatgtat cgcgcacgtc
      421 tgcggcgccg gtcccgggcc ggatttgggt cgatctcggc ggctgtgcca tcggggaagg
      481 aaagccggcc gacgctatcg atgtcgcggt gcgcaagccg agatcagaca acagccgata
      541 cgcgctggcg tgcaggcact ggtagcgatg ggcaaggtca ccgggttcct cgaatacgaa
      601 cgcaacgacc gtgactacga gccggtcgag gagcgcgtgc gccactcgcg cgaattcata
      661 ctgccgctca aggacgacga ataccgcatc caggcggcgc gctgcatgaa ttgcggcgtg
      721 ccctattgcc agggcaccgg ctcgctcgcg cccggcacgc cggggtgccc ggtcaacaac
      781 cagatcccgg actggaacga cctcgtctac accggcaact gggacgaggc cgcgcgcaat
      841 ctgcattcga ccaacaactt tccggaagtg accggccgcg tctgcccggc gccgtgtgaa
      901 gcgtcatgca cgctcaacat cgatgagaac ccggtcacca tcaaatcgat cgaatgcgcg
      961 atcgccgacc gggccatcgc ccaggggctc aagcccgagc cggcgacgga tcggaccggc
     1021 aaacgcgttg cggtcgtggg ctcggggccg gccggacttg cctgcgcgca acagctcgcg
     1081 cgcgccggcc acgaggttca cgtctacgaa aaatacgcca gggccggcgg gctgctccgc
     1141 tacggcattc ccgacttcaa gatggagaag catcacgtcg accgccgcgt cgcgcaaatg
     1201 gaggccgagg gcgtagtctt ccattacaac gtccatgtcg gcgtgaatct cgctgctgat
     1261 aagctcctcg ccgaccacga cgccgtggtt ctcgccggcg gcgccgagaa ggcgcgtgac
     1321 ctgccggtcc ccgggcgcga gctcaggggc atccatttcg ccatggactt cctgccgcag
     1381 cagaaccgcc gcgtcagcgg cgagcccgcg gcgaccggag agaccattct cgccggcggc
     1441 aagcacgtcg tcgtcatcgg cggcggcgac accggctcgg actgcatcgg cacctccttc
     1501 cgccagggtg cgctgtcggt aaccaatttc gaaattctgc cggagccgcc ggagcaagag
     1561 aacaagatgc tcacctggcc caactggccg ctgaagctgc gcacctcgtc gagccatgag
     1621 gaaggcgccg agcgcgactt cgcggtgatg accacgcgct ttgccggcgc caacggcttc
     1681 gtcaacacgc tgcagtgcgt gcatgtcgac gacaggatga agccgatgcc gggaagcgaa
     1741 ttcgagatcg ccgccgagct cgttctgctg gccatgggct tcgtgcaccc ggtacacgag
     1801 gggctggtca aggatctcgg gctcgcgctc gatcagcgcg gcaacgtgcg cgcctccacc
     1861 gacgattacc gcacctcgat cgacaaggtg tttgccgccg gcgacctgcg ccgcggccag
     1921 tcgctggtgg tctgggcgat ccgcgaaggc cggcaggcgg cgcacgcggt cgacaagttt
     1981 ctgatgggct cgacgctgct gccgcgctga atcctgtatg gcggttagcc acaggcgtaa
     2041 cgcacaatat tggatacatc ggattggcgg attgcgcttc gctaatccgc cctacgtgct
     2101 actatgttca tatttccaaa tggtatgaga cttagatttg atccgtggcc gggccagtat
     2161 ttgtcaggac agggtcccca tattcaatct ggaatatcca ggcctggaca ataaacatat
     2221 cgatcttaag ccgtaggagc ggcactatgc ggtatgattt caacgtcttg gaaaaacgtg
     2281 ccaaacagtt gttggtcgaa aatcgccccg cagatgccat caagatctat ctcttcatgg
     2341 cggacggaga ccagtcgttg gacgccggtt atctcggctt gaaaataggt cagtgctacg
     2401 aaagaatgaa cgacttgcat gcggctaagt attggtacgg gcgagccttg gaagaagatg
     2461 ctcctattgc gcgggcagaa agtgttgaag gtcggaacag atcagagcac gtgacaatcg
     2521 acgatattat tgcgccggaa gaatacacca tcccataagt cccttttagt tgcctatact
     2581 gaagggcaga caaccgagtt cgtggaggct atggaggtcc atgccgatca gcccgtaggg
     2641 cggatttagc cgcgggcgta acccgccata ttggatacat cggattggcg gactacgttt
     2701 cgctaatcca cccctgcgtg ctactcgcta cgtgctaagt ggcggtcgga taacaggttc
     2761 cgcacaatcc ggcacgaacc tcgtcgccca atcccgcatt gcgcttcgct ccatgcgggc
     2821 tacgccgtcg atgctgcccg cgtcgcaacg aggcgcatcg gatcaacgaa cgttcggtgc
     2881 tgcggggccg atgggcgatg ggggccgtat cgcgccgtca aggtccgccc gcgaacggcg
     2941 cggcgagcgc agcggcggcg tctcgggtgc cgcttccttc ttcgcgtcag gcttggtctc
     3001 gggcttctca ggcttcttgg ctacgctctt gccgggcgcg accttcgcgg cggcggcagc
     3061 aggctgcgcc gtaggcgcgg gcgcgggcgc ggccggcacg atttccacct cgttcgaaat
     3121 gttcgcggtc gcgccggcgc gcggccagga gaaattgtcg gcgcggccgg cgggcggcgc
     3181 cggaatggca tcgccgcggc tgagcacgcg cgcggccatc ggatcggccg ccgcccctcc
     3241 gggagcggga gtgccgacgg cgcccagaag gtcgccggtc tcggccgcgc ccgcattgag
     3301 gggaacgacc gtgcctacgg ccgcgcgcgc cgtgccgccg agggctttgg gcgcctgctc
     3361 gtccgtgccc ggcaacgcca ccgggaccgg gcgattcgac atcacgcggc gcagatcgtg
     3421 ctccacgtaa tgcgcaagct tcaccgcacc ggctttggtg aaatgcacgc cgtcaccggc
     3481 gcgcagccgc cgaatctggc cttcgaagtc gggcccctgc accgcgaagc gtccctggtc
     3541 gtcgacgaaa ccgtcccaga catcgacgta cacgatgccc gcgcgcgccg cccgcgcccg
     3601 ataaatctca tcgaggtagg tgatgtcgct attggtgcgc gtacgcagcg caggcagccc
     3661 gacccacagg accggcacgc ccttggcctt gagcgccacg atcatctcgt cgacgcgctt
     3721 ggtataggcc tcggtccatt tgtcggtgtg gaattcgtag ttcaccatct gcgccgggcg
     3781 ggccggttcg ctcggcggcg cggcagccgc cgcaggcggg gccggttggg cggcgggttc
     3841 gcccgacgac tgctgcgccg gctcggaacc ggacggcgcg ggcgtcgctt ccccctgccc
     3901 ttgcgcaggc gcggccgttt cttgtttctg cggcttcgga ttgatgcgtt cgcgcaatgc
     3961 ctgacggtca ttcagaccga gcatcacgac gatgacgccc ggctgttcgc ccgccagcat
     4021 ctccttgacg gcctgcggcc attcgatcgc ctcgttgcgc gcttcgtagc ggacgagacc
     4081 ggagagcggc cgaatcttgc gcacgacgcc gatctcgggc gtgtccgtga gcgcctcctc
     4141 gagcccgtag gcgagccaat cggcgagcga gtcgccgatg accagcaccg tgctcgtcgg
     4201 cggggtctct gccttgcgcg gcggcggcgc cttggcgccc tcggagggcg gcggcggtat
     4261 cccgcggaaa ccgggaaaga ccgaaggcgg gggcgggccg cggtcgccga acagcgagaa
     4321 cgggaagaaa tcctggcgtc gctcgaagag ttgcgcgtcg gccgaggcag caaacagcgc
     4381 gccgcccgtc gccgccaata cgagcgcgct cgcgagccgt cgtcccatcc gtcctgccct
     4441 gcgtgccgtc atcgatggcg ctaccaattt cctcgcccag cgagcttcgc cgcaccgcca
     4501 agctcacggt gctgctcgcg ttttcaacca acccccatac tacccaaaaa atgtcaactt
     4561 gaggatcgct gcatcgttag cgaaccgtcc gcctgaggtg cggcagaatt gcgcggtcat
     4621 ggctggcgca aacggtcgag cacgtggctc gaagggaacc cgtcgggaat ttgcccggtc
     4681 gtgacctgaa agttgcgaat ggcgatgcgg gtgcgcgggc cgatgcggcc gtcgggctcg
     4741 ccgatgtcga aaccgcgctg gccgaggagc tgctgcagct cgtagcgttc ggcgaccgtg
     4801 agcgggcgct cctcgcgcgg ccaggcctgc agcagcggac cgccgccgcg cagccggtcg
     4861 gagaggtggc cgatggcgag cgcgtaggcc tccgccggat tgtatttcat gatgacgcgg
     4921 aaattctgca gcatcaggaa cgccgggccg cgcgcaccgg ccggcaccag cagataggcg
     4981 cgatcggaag gacgcgggaa tgcctggccg ccggcgcggg cgataccgag cgcctgccat
     5041 tggcgcaacg tcatctgccg cgaacggtcg gcgaggagga aatcgaaatt ctgcggcagg
     5101 acgacttcgt agccccaccc ctcgccgctg gcccatccgt ccgttttcag attgttcgcc
     5161 gtcgaggcaa tcatgtcggg gacggaatcg acaacatcgc gccgcccgtc gccgtcgaag
     5221 tcgactgcgt agcgtttgaa cgtggtcggc atgaactgcg tcgggccgaa ggcgccggcc
     5281 caggagccga tcaggcgctc gggcttgagg tcgccgcgct gcaggatttc gagcgccgag
     5341 agaaactctt cgcgaaagaa atcgcggcgg cggccgacac aggcgagcgt cgccgtggag
     5401 cggatcacgg accggtcgcc gcccatcgtg ctgtacttcg actcgacgcc ccagattgcc
     5461 gcgatgacgt ggcggtcgac gccgtaggtc cgctcgaccg cagcaaaggt cggcgcatgt
     5521 tgcgccaata tctcgcgccc gcgcgcgatg cgctcgtcac tgaccagcgc atcgagatag
     5581 tcccaggtcg atttggtgaa ttcgggttgc gcgtcgagca aatccatcag gcgcaggtcg
     5641 ggggtgagac cggcggtata gccctcgaag gtctcgcgcg cgacgccgcg ccgcgccgcc
     5701 aatggccaca gcccggcgag gcaatcgccg aattcggcag cggcggcgcg aatagcctct
     5761 gccgtcatca gcggatggcc cgaagcgccg gattgcccgc tccattcgcg cgcgctggcg
     5821 ggcgcggccg ccggtgcggg aaccgagttg gccgccggcg gttggaacaa ccgggtcagc
     5881 cagttgtcgg aagtctcttg cgccagagtg gggccggcaa aggctgcggc aaggagagtt
     5941 gccgcggccc ggcgaaaaat cggcgcggag atgggcatgg cttgcggcct cgatggcgga
     6001 cgttggcgtc gatcggtagt cggaggaatg ggcacctgct atgttaccga acgattaacc
     6061 tccaattcgt cggcgttcgt ctccgaaagt tcgcctccgg catggattca cataacagca
     6121 atacgatgcg gctaagtaat gacggcggct tccgaccgcc ccccgcagcc atgcagcacc
     6181 atcctcggtc ttgccacgag cgtcgcgatt cggcctgctc cgctcttgag cctgcagccg
     6241 agagggtgac caacgcatgg ccgcctgttc ctcgtcccgc tgccgcaccg cgccgggatg
     6301 aagaatcagg tgagaaccgc ctcatgaagt cgtcttaatt cttacagcac gccaacgcat
     6361 gaaactcgtc cgcaaagccg tctttcccgt ggccgggctc ggcacccgct tcctgccggc
     6421 gaccaaggcg atgccgaagg agatgctgcc ggtggtcgac cggccgctga tccagcatgt
     6481 cgtcgacgag gcgcggcaag caggcatcga gcacttcatc ttcgtcaccg gccgcaacaa
     6541 gggcgtcatc gaggaccact tcgaccgcca gttcgagctg gagatgacgc tgctcgaacg
     6601 gcagaagcac gaggcgctcg atttcctgcg gcaggagctg ccgcagcccg gcaccacgag
     6661 cttcacgcgg cagcaggagc cgctcgggct tggccacgcg gtgtggtg
//
LOCUS       DATMQB010000235         4183 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1947513, whole genome shotgun sequence.
ACCESSION   DATMQB010000235 DATMQB010000000
VERSION     DATMQB010000235.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4183)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4183)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4183
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1947513"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..231
                     /locus_tag="VNY79_07190"
     CDS             <1..231
                     /locus_tag="VNY79_07190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72266.1"
                     /translation="IGFLRVGGGAHFFTDVVFAGVFMFLVVWTLHGMIYRWRTRAEEG
                     VIECGLAQIGEALRGALAGLAGWITGRVGRGS"
     gene            337..1584
                     /locus_tag="VNY79_07195"
     CDS             337..1584
                     /locus_tag="VNY79_07195"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004055 - argininosuccinate synthase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006526 - arginine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HWX72267.1"
                     /translation="MPKDDGKQDGVRKVVLAYSGGLDTSIILKWLQTTYGCEVVTFTA
                     DLGQGEELEPARAKALTLGIKPENIFIEDLREEFVRDYVFPMFRANALYEGQYLLGTS
                     IARPLIAKKQIEIAERVGADAVAHGATGKGNDQVRFELSYYALKPDVKVIAPWREWEF
                     RSREALIAFAEQNQIPIAKDKRGEAPFSTDANLLHTSSEGKVLENPGDEVPDYVYSRT
                     VDPEKAPDQPAYVTVDFERGDPVAVNGKAMSPAALLAHLNALGRQHGIGRLDLVENRF
                     VGMKSRGMYETPGGTILLAAHRGIEQITLDRGAAHLKDELMPKYAELIYYGFWFAPER
                     EMLQAAIDRSQEFVSGRVRLKLYKGSVGVVGRESGYSLYDQDLVTFEEGKVAYDQRDA
                     EGFIRLNALRLRTLGQRRRKLKI"
     gene            complement(1636..2019)
                     /locus_tag="VNY79_07200"
     CDS             complement(1636..2019)
                     /locus_tag="VNY79_07200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HWX72268.1"
                     /translation="MLDHVGFPITDYKRSKAFYEKALAPLGYSLVVEVPQTGGGHFAA
                     GFGADGKPDFWIGDEGGLNRSLHIAITAKDRACVDAFYRAALAAGAKDNGAPGLRPHY
                     HPNYYGAFVIDPDGHNIEAVCHSPA"
     gene            complement(2617..3396)
                     /locus_tag="VNY79_07205"
     CDS             complement(2617..3396)
                     /locus_tag="VNY79_07205"
                     /EC_number="1.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013650947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008177 - succinate dehydrogenase
                     (ubiquinone) activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate dehydrogenase iron-sulfur subunit"
                     /protein_id="HWX72269.1"
                     /translation="MVQLTLPKNSKVTEGKTWPHRAKAGAEREYRVYRWDPEDDRNPR
                     IDVYYVDTADCGPMVLDALIWIKNNVDATLTFRRSCREGICGSCSMNIDGTNTLACTK
                     AMGEISGAVRIYPLPHMAVVKDLVPDLTNFYAQHAAIQPWLRTISPTPRKEWKQSHDD
                     RQKLDGLYECILCACCSTACPSYWWNPERFLGPAALLQAYRWISDSRDEATGERLDDL
                     EDPFRLYRCHTIMNCTKACPKHLNPAKAIADIKRLMVERQV"
     gene            complement(3473..>4183)
                     /locus_tag="VNY79_07210"
     CDS             complement(3473..>4183)
                     /locus_tag="VNY79_07210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HWX72270.1"
                     /translation="GIATNHHGEAVIKKDGNNDFIVPGLMALGEAACVSVHGANRLGS
                     NSLIDLVVFGRAAALRCAEILTPNDKQADLPKDSADLALSRLDRFRNASGKTSTAALR
                     LKMQKVMQNNCAVFRTGEVLAEGVKLIHDTHAEVADIKVSDRSLIWNSDLIETLEFDN
                     LIAQAVVTLNSALNRTESRGAHAREDFPERDDKNWMKHTLAWLDTTTGKVTIDYRPVH
                     TYTLTNDVAYIEPKARVY"
BASE COUNT          714 a         1304 c         1397 g          768 t
ORIGIN      
        1 atcgggttcc tgcgcgtcgg cggcggcgcg catttcttca ccgacgtggt ctttgccggc
       61 gtgttcatgt tcctcgtcgt gtggacgctg catgggatga tctatcgctg gcggacgcgg
      121 gccgaagagg gggtgatcga atgtgggctc gcgcagatcg gcgaggcgtt gcgcggcgcg
      181 cttgccgggc tcgccggatg gatcaccgga cgcgtcggtc gaggctcctg agcgccgctc
      241 gcgatgcgcg gcaggccgaa ttggttgcgc cgcctctgcg cgtgcctata gtccgcgcgc
      301 acgcgggcgg ccgtcggcgc cgccacagga tttcgcatgc cgaaggatga tggaaaacag
      361 gatggcgtca ggaaagtcgt gctcgcctat tccggcgggc tcgacacctc gatcatcctc
      421 aaatggctgc agacgaccta tggctgcgag gtggtcacgt ttaccgccga cctcggccag
      481 ggtgaggagc tcgagccggc ccgcgccaag gcgctcacgc tcggcatcaa gccggaaaac
      541 atcttcatcg aagatttgcg cgaggaattc gtacgcgact acgtctttcc gatgttccgc
      601 gccaacgcgc tctacgaagg acagtatctc ctcggcacct ccatcgcgcg gccgctcatc
      661 gccaaaaagc agatcgagat cgcggagagg gtcggcgccg acgccgtcgc ccacggcgcg
      721 accggcaaag gcaacgacca ggtccgcttc gagctttcct attacgcgct caagcccgac
      781 gtgaaagtca tcgcgccgtg gcgcgagtgg gagttccggt cgcgcgaggc gctcatcgcc
      841 ttcgccgagc agaaccagat acccatcgcc aaggacaagc gcggcgaggc gccgttctcg
      901 accgacgcca accttctgca cacgtcctcg gaaggcaagg tgctggaaaa tccgggcgac
      961 gaggtgccgg attacgtcta ttcgcgcacc gtcgatcccg aaaaggcgcc ggaccagccg
     1021 gcctacgtca ccgtcgattt cgaacgcggc gatccggtcg ccgtcaacgg caaggcgatg
     1081 tcgcccgccg ctctgctcgc gcatctcaac gcgctcggcc gccagcacgg gatcggccgg
     1141 ctcgatctgg tcgaaaaccg tttcgtcggc atgaagtcgc gcgggatgta cgagacgccc
     1201 ggcggcacga ttctcctcgc cgcccatcgc ggcatcgagc agatcacgct cgaccgcggc
     1261 gccgctcacc tcaaggacga gctgatgccg aaatacgccg agcttatcta ttacggcttc
     1321 tggttcgcgc cggagcgcga gatgctgcag gcggcgatcg accggagcca ggaattcgtc
     1381 agcggccgcg tgcggctcaa gctctacaag ggcagcgtcg gcgtcgtcgg ccgcgagagc
     1441 ggatattcgc tgtacgacca ggacctggtg acgttcgagg agggcaaggt cgcttacgac
     1501 cagcgcgacg ccgaaggttt cattcgcctc aacgcgctgc gcctgcgcac gctcgggcag
     1561 cggaggcgaa agctgaagat ttgaggcggc gcgtctccct cttcccgcgc ggcggggaga
     1621 ggtgggaagc tgacactaag cgggcgagtg gcagaccgct tcgatgttgt ggccgtccgg
     1681 atcgatcacg aaggcgccgt agtagttcgg gtggtaatgc ggacgcagcc cgggcgcgcc
     1741 gttgtccttc gcgccggcgg cgagggccgc gcgataaaag gcgtcgacgc aggcgcggtc
     1801 cttggcggtg atcgcgatgt gaaggctgcg attgagaccg ccctcgtcgc cgatccagaa
     1861 atcgggcttg ccgtcggcgc cgaacccagc agcaaaatgt ccgccgccgg tctgcggaac
     1921 ctccacgacg agcgaatagc cgagcggcgc tagtgccttc tcgtagaagg ctttcgagcg
     1981 cttgtaatcg gtaatgggaa atccgacgtg gtcgagcatg tgcagcctcc cgtcgtcagc
     2041 atcacgatct ttcaccgcga gcttaggcga agagtgttgc ggacgaaagc tgcatgcaga
     2101 ccttaatgtc cgctacgcgc aggccgcgaa caccacttcg acgcggcggt tctcttgacg
     2161 gccggccgga tcgtcagcgt ctatcttacg atgcacctgc agtgagggga gcgaagagtc
     2221 ctctctgcat tacacttctt tgcatactcg aaggcggtac aagcccaagg tggcatccac
     2281 gggttccaca gggtgccggc cagcgcgggc gaagcgacac atagaactcc gacaacgacc
     2341 agcagcattt tcatctgagt catttgctcc tccttacaaa tttcccgtag gaaaggaaca
     2401 accatttgaa aatacaacat catcatacga atgtggttac gcgacccctg ccgtgggagg
     2461 agacttggga aggcgtttcc gctaggctcg gaatcgcggc ggcgctccct cacccggatt
     2521 gctccgcaat ccgacctctc cccgcgcggc gggagaggtg tgaagcgcac gctacgcagt
     2581 cctcgctccc cgcgcggcgg ggagagggtg agacaatcac acctgccgct cgaccatcag
     2641 gcgcttgatg tcggcgatgg ccttggccgg gttgagatgc ttagggcagg ccttggtgca
     2701 gttcatgatg gtgtggcagc ggtagagccg gaacgggtcc tcgaggtcgt cgagccgctc
     2761 gccggtcgcc tcgtcgcgcg agtctgagat ccagcggtac gcctgcaaga gcgccgccgg
     2821 cccgagaaag cgttccgggt tccaccagta gctcgggcac gcggtcgagc agcacgcaca
     2881 caggatgcac tcgtagaggc cgtcgagctt ctgccggtcg tcgtggctct gcttccattc
     2941 cttgcgcggc gtaggcgaga tggtgcgcag ccacggctgg atggcggcgt gctgcgcata
     3001 gaagttggtg agatcgggca cgaggtcctt caccaccgcc atgtgcggca gcggatagat
     3061 gcgcacggcg ccgctgatct cgcccatcgc cttggtgcag gcaagcgtgt tggtgccgtc
     3121 gatgttcatc gagcaggagc cgcagatgcc ttcgcggcag gagcgccgga aggtcagcgt
     3181 cgcgtcgacg ttgttcttga tccagatgag cgcgtcgagg accatgggcc cgcaatcggc
     3241 ggtgtcgaca tagtagacgt cgatgcgcgg attgcggtcg tcctcggggt cccagcgata
     3301 gacgcggtat tcgcgctcgg cgcccgcctt cgcccgatgc ggccaggtct tgccctcggt
     3361 gaccttggag ttttttggaa gggtgagctg gaccatgtca tttgccctat gcttcgatca
     3421 gatcgagccg gcgatgcggc gccggatttt ccgctcgtcc gccatagctg cctcaataca
     3481 cccgcgcctt cggctcgata taggcgacgt cgttggtcag cgtgtaggtg tgcaccggcc
     3541 ggtagtcgat cgtgaccttg ccggtggtcg tgtcgagcca ggccagcgtg tgcttcatcc
     3601 agttcttgtc gtcgcgctcc gggaagtcct cgcgcgcgtg cgccccgcgg ctttcggtgc
     3661 ggttgagcgc cgagttgagc gtcaccacgg cctgcgcgat gagattgtcg aattcgagcg
     3721 tctcgatcag gtcggaattc cagatcagcg agcggtccga caccttgatg tcggcgacct
     3781 cggcgtgggt gtcgtggatg agctttacgc cctcggccag cacctcgccg gtgcggaaca
     3841 ccgcgcagtt gttctgcatc accttctgca tcttgagccg cagcgccgcg gtcgaggtct
     3901 tgcccgaggc gttgcggaag cggtcgagcc gcgacagcgc gaggtcggcg gaatccttcg
     3961 gcaggtcggc ctgcttgtcg ttcggcgtga ggatctcggc gcagcgtagc gcggcggcgc
     4021 gtccgaacac gacgagatcg atcagcgagt tcgagcccag ccggttggcg ccgtgcaccg
     4081 agacgcaggc cgcttcgccc agcgccatca ggcccggcac gatgaaatcg ttgttgccgt
     4141 ccttcttgat cacggcttcg ccgtgatggt tggtggcgat gcc
//
LOCUS       DATMQB010000236         5068 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1016795, whole genome shotgun sequence.
ACCESSION   DATMQB010000236 DATMQB010000000
VERSION     DATMQB010000236.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5068)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5068)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5068
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1016795"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            304..1890
                     /locus_tag="VNY79_07215"
     CDS             304..1890
                     /locus_tag="VNY79_07215"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HWX72271.1"
                     /translation="MGTLGIVAAIVALTFGDYGLGWDDYTHSQYGNLLVSLYGSGFAD
                     QRAFSFVNLYMYGGGFDLLATLAAKVLPLGPFETRRLVGGAIGLVGLFVTWRLGRRLG
                     GPLAGLVALVLLAACPLYYGHMFMNAKDAPFAVAMASALLGIVRAFEEYPRASPATIA
                     LCGIGIGAAIGSRVMGGFALLNALLPLLLIVAVRSRESGLKPALAECGSYLVPFIPGM
                     LLAFVVMGLLWPWAVISPLNPFRAVEYFSNFFEKPWRELFAGQIILVPDMPRSYVPTL
                     VALTLPELMLALGFCGLGGAVLAAARGDPERSGVGRRAAVLAVVLAAVLPVAVTVAAR
                     PAMYNGIRHFIFLMPPFAVLGGLAAPWIARRLHPYGQTAMAAAAVILVAGIASPVIEM
                     VRLHPYEYTHFNHAAGGAAGARTRFMLDYWGLSIKQASAELRDILATRQENPRNATWT
                     VAVCGPHPAAVVALGPQYSAIWDPKGADFAMTLGEFYCAKLDAPVLFDIEREGVVYAR
                     VYDIRGRSITTLLTVRGPDS"
     gene            complement(1894..2763)
                     /locus_tag="VNY79_07220"
     CDS             complement(1894..2763)
                     /locus_tag="VNY79_07220"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HWX72272.1"
                     /translation="MSRTISWSKTVTFFEGDWHEGNVPIMGVRTHAAWLCTSVFDGAR
                     AFEGVAPDIDLHCARVNESAKVMSLKPLVSTETWMGLVGEGRKRFDRDAELYIRPMYW
                     PEDAAAGAVRPDPETTRWCLTLYVVPLPKPTGTAITLSPFRRPTRESAPVDAKAGCLY
                     PNNARALIEARSRGFDNCLMCDMLGNVAELGTANIFMAKDGVVFTPAANGTFLSGITR
                     GRVIALLREAGVTVVEAVLRYSDFQSADEIFSTGNFTKVSPVTRIDDRSLQPGPFYRR
                     ARELYWEFAHAGP"
     gene            2815..3507
                     /locus_tag="VNY79_07225"
     CDS             2815..3507
                     /locus_tag="VNY79_07225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006939424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018784 - (S)-2-haloacid dehalogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006805 - xenobiotic metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="haloacid dehalogenase type II"
                     /protein_id="HWX72273.1"
                     /translation="MIAPKEMEMINARAYVFDAYGTLFDVHAAIARHRADAGPDAERF
                     SEIWRSKQLEYTWTLTLAGRYVDFWTLTERALDYAFARVPSVDRTLHPRLLEAYLKLD
                     AFPDARAALTGLKARGVRLAILSNGAPRMLTAAVEAAGIAALLDAVLSVDAVRLYKPR
                     PEVYALVTDAFACKPEEVAFVSSNRWDVMGAAAFGFRPLWVNRAKMPEEYAALPPVQV
                     IADLGGLASLAL"
     gene            complement(3524..>5068)
                     /locus_tag="VNY79_07230"
     CDS             complement(3524..>5068)
                     /locus_tag="VNY79_07230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="B12-binding domain-containing radical SAM
                     protein"
                     /protein_id="HWX72274.1"
                     /translation="SCEVVGARYPTIPLGLITVAAMLPSHWDVRLVNCNTEDLLDEDL
                     EWADLVLSGGMLFQQASTLDLIDLCRERGKQVAVGGPDVSSSPHIYERANFRVVGEAE
                     GIIDKFVATVETGGNEGLFEAPKYQIDVTKTPKPRFDLLKFEHYMHIGVQYSRGCPFT
                     CEFCDIIELYGRVPRTKSTEQMLEELETLYQLGYRGHVDFVDDNLIGNKKAVKAFLPH
                     LIIWLEERDYPFEFSTEASLNLSDDAELLDLLKKANFFLIFVGIESPDTETLIAMRKK
                     QNTRRSIPESVHRIYDHGIFVTAGFIVGFDSEKGSVAEPMIDLIEEAAIPMAVIGLLF
                     ALPNTQLTRRLAREGRLHANSEILPKGTGDQMATGSNFETKRPRLDVLRDFRRVLHTA
                     YTPEAYCRRIDRLVSLLDCSGRRRELPKGDMRAKMGTFNVVQEILRRMPEHRELFWRT
                     FTKALNTNPGALRAVVTLMGFYLHIGPYARYAVGQIDRQIAVLESEDFVPPRLAPAVP
                     AEAISA"
BASE COUNT          791 a         1704 c         1636 g          937 t
ORIGIN      
        1 tcctcgacca cctggtgaat tgggaccatg tggccgagat gtacgagcaa gccacgaaat
       61 agcacggtgc ggtcacgggc tacgtaagcg ggacccgccg gtcccgcttt ttgcgctcgg
      121 gcgccgcgaa acggcctcaa ccatgctgag gcatgggcga ccgctgccga tgagaagcgc
      181 ttgttgaacg tcacttcgaa acccgcatcc gcgatcccag gggtcacggc ccggcctgcg
      241 gggacatcta ttctcgcccg ctccgagaca ttcactgttg cgcgcattct ggacgcgctc
      301 gcgatcggca cgctcggcat cgttgcggcg atcgtcgccc tgaccttcgg tgactacggc
      361 ctcggttggg acgattacac ccattcgcaa tacggcaacc tcctggtctc gctctacggg
      421 tcgggtttcg ccgatcagcg cgcgttctcc ttcgtcaatc tctacatgta cggcggcggt
      481 ttcgatcttc tcgccacgct cgcggcgaag gtgctgccgc tcggcccgtt cgagacgcgg
      541 cggctcgtag gcggggctat cggcctcgtc ggccttttcg tcacttggcg gctgggacgg
      601 cgcctcggcg gcccgctcgc cgggctggtc gcgctcgtcc tcctcgccgc ctgcccgctc
      661 tattacggcc acatgttcat gaacgcgaag gacgcgccgt tcgctgtcgc catggcgtcc
      721 gcgctgctcg gcatcgtccg cgcgttcgag gaatatcccc gcgccagccc ggcgacgatc
      781 gcgctctgcg gcatcggcat cggcgctgcg atcggctcgc gcgtcatggg cggctttgcc
      841 ctgttgaacg cgctgctgcc gcttctgctc attgtggccg tgcggtcgcg cgaaagcgga
      901 ttgaagcctg cgctcgccga atgcggctcg tacctcgtcc cgttcattcc cggcatgctc
      961 ctcgccttcg tggtgatggg cctgctctgg ccgtgggccg tcatctcgcc gctcaacccg
     1021 tttcgcgccg tcgagtactt ctccaacttc ttcgagaagc cgtggcgcga gctgttcgct
     1081 ggccagatca tcctggttcc cgacatgccg cgcagctatg tgccgacgct ggtcgcgctg
     1141 acgctgcccg aactgatgct ggcgctcggg ttctgcggac tgggcggcgc ggtactagcc
     1201 gccgcgcgcg gcgatccgga gcgctccggc gtcgggcgcc gcgccgcagt cctggccgtg
     1261 gtactcgccg cggtgcttcc ggtcgcggtg acggtcgccg cgcggccggc gatgtacaac
     1321 ggcatccgcc atttcatctt cctgatgccg ccgttcgctg ttctcggcgg cctcgcagct
     1381 ccgtggatcg cgcgacgcct ccacccctac gggcaaaccg cgatggccgc ggccgccgtc
     1441 attctcgtcg ccggtatcgc ttccccggtc atcgaaatgg tgcggctgca cccttacgag
     1501 tacacgcact tcaaccatgc cgccggaggc gctgccgggg cgcggacgcg cttcatgctc
     1561 gactactggg gattatcgat taagcaggcc tccgccgagt tgcgcgacat cctggccacc
     1621 cggcaggaga acccgcgcaa cgcgacatgg acggtcgcgg tctgcgggcc gcatccagcg
     1681 gccgtcgtcg ccttgggtcc gcaatattcg gcaatctggg acccgaaggg cgccgacttt
     1741 gccatgacgc tcggcgagtt ctactgcgcc aagctcgatg cgccggtcct cttcgacatc
     1801 gagcgcgaag gcgtggtcta cgcgcgggtc tacgacatcc gcggccgttc gatcacgaca
     1861 ctgctcaccg tccgcggccc cgactcatag gcctcacggc cccgcgtgcg cgaactccca
     1921 gtacaactcg cgggcccggc ggtagaacgg gcctggctgc agactacggt cgtcgatccg
     1981 ggtcacgggc gagaccttgg tgaagttgcc cgtggagaaa atctcgtcag cggattggaa
     2041 atcggaatag cgcagcaccg cctcgacgac ggtgacgccg gcctcgcgca gcaaggcgat
     2101 gacccgcccg cgggttatgc cggagaggaa ggtgccgttc gccgccggcg tgaacacgac
     2161 gccgtccttg gccatgaaga tattggcggt gccgagttcg gcgacattgc cgagcatgtc
     2221 gcacatcaga caattgtcga agccgcgcga gcgcgcttcg atcaaggcgc gcgcattgtt
     2281 cgggtagaga cagccggcct tggcgtcgac cggcgcggac tcgcgcgtcg gacggcggaa
     2341 cggcgacagc gtgatggctg tgccggtcgg cttcggcagc ggtacgacgt agagcgtgag
     2401 gcaccagcgc gtggtttccg ggtccggccg caccgcgcca gcggcggcgt cttccggcca
     2461 gtacatcggc cggatgtaga gctcggcgtc gcggtcaaag cgcttgcgcc cctcgccgac
     2521 gaggcccatc caggtctccg tcgaaacgag gggcttcagg ctcatgacct tggcggattc
     2581 gttcacgcgc gcgcagtgca gatcgatgtc gggggcgacg ccctcgaaag cgcgcgcacc
     2641 gtcgaacacc gacgtgcaga gccacgccgc atgcgtgcgc acgcccatga tcggcacgtt
     2701 gccctcgtgc cagtcaccct cgaaaaacgt gaccgtcttc gaccagctga tggtccgact
     2761 catcgaatca tcctcgcatc accctattgt ctccccggca cggcctttgt caccatgata
     2821 gcccccaagg agatggagat gattaacgcc cgcgcctacg ttttcgatgc ctacggtacc
     2881 ttgttcgatg tccacgccgc gatcgcgcgc caccgcgccg acgccggccc cgatgccgaa
     2941 cgattttcgg aaatctggcg atcgaagcag cttgaataca cctggacgct gacgcttgcc
     3001 ggccgctacg tcgatttctg gacgctgacc gagcgcgcgc tcgactacgc gttcgcccgc
     3061 gtgccctcgg tggaccgaac gctgcacccg cgcttgctcg aggcgtatct caagcttgac
     3121 gcctttcccg acgcccgcgc cgcgctgacc ggtctcaagg cgcgcggcgt ccgcctcgct
     3181 atcctctcga acggcgcccc gcgcatgctc acggccgccg tcgaagcggc cgggatcgcg
     3241 gcgcttctcg atgccgtgct ctcggtcgac gccgtgcgcc tctacaagcc gcggcccgag
     3301 gtctatgcgc tggtgacgga tgcgttcgcc tgcaagccgg aggaggtcgc cttcgtctcc
     3361 tcgaatcgct gggacgtcat gggggcggcg gcgttcggct tccgcccgct atgggtcaat
     3421 cgggcgaaaa tgccagagga gtatgcagcg cttccgcccg tgcaggtaat agcggacctc
     3481 ggcggtctcg cctcactcgc gctgtgagcg agggagcgcg gccttaggcg ctgatggctt
     3541 ccgccggcac cgccggcgcg agccgtggcg gcacgaagtc ttcgctctcg agcactgcaa
     3601 tctggcgatc gatctgcccg acggcatagc gcgcgtacgg gccgatgtgc agatagaaac
     3661 ccatgagggt aacgacggcg cggagcgcgc cgggattggt attcagcgcc ttggtgaagg
     3721 tgcgccaaaa cagctcgcgg tgctccggca tgcggcggag gatttcctgc acgacattga
     3781 aggtgcccat cttcgcccgc atgtcaccct tgggcagctc acgccggcgt cccgaacagt
     3841 cgagcaggct cacgagccga tcgatccggc ggcaatatgc ctcgggcgta taagcggtat
     3901 ggaggacgcg gcggaaatcg cgcagcacgt cgagccgcgg acgcttggtc tcgaagttcg
     3961 agccggtcgc catctggtcg ccagtcccct ttggcaggat ctcgctgttg gcgtgcaggc
     4021 ggccttcgcg cgccagccgg cgcgtcaatt gcgtgttggg caatgcgaac agcagcccga
     4081 tcaccgccat tgggatcgcc gcctcctcga tcagatcgat catcggctcc gccaccgagc
     4141 ctttctcgct gtcgaacccg acgatgaagc cggcggtgac gaaaattccg tggtcgtaga
     4201 tgcggtgcac gctttccgga atgctgcggc gcgtgttctg cttcttgcgc atcgcaatca
     4261 gcgtttctgt gtcggggctc tcgatgccga cgaagatgag gaagaagttc gccttcttca
     4321 gcagatcgag cagctcggca tcgtcggaaa gattgagcga ggcctcggtg gagaattcga
     4381 acgggtagtc gcgttcctcg agccatatga tgaggtgcgg caggaacgcc tttaccgcct
     4441 tcttgttgcc gatgagattg tcgtcgacga aatcgacgtg cccgcggtaa ccgagctggt
     4501 agagcgtctc caactcttcc agcatctgct ccgtcgactt ggtccgcggc acccggccgt
     4561 acagctcgat gatgtcgcag aactcgcagg tgaacggaca gccgcgcgaa tactgcacgc
     4621 cgatgtgcat gtagtgctcg aacttgagca gatcgaagcg cggcttcggc gtcttggtga
     4681 cgtcgatctg gtacttcggc gcctcgaaca ggccctcgtt gccgccggtc tcgacggtgg
     4741 cgacgaactt gtcgatgatg ccttcggcct cccccacaac gcggaagttc gcccgctcgt
     4801 agatgtgcgg actggacgac acgtcggggc cgccgacggc gacctgcttg ccgcgctcgc
     4861 ggcacaaatc gatgaggtca agcgtgctcg cctgctggaa cagcatgccg ccggacaaca
     4921 ccaggtcggc ccattccaga tcctcgtcga gcaggtcctc ggtattgcag ttgaccaggc
     4981 ggacgtccca gtgggacggc agcatggccg caaccgtgat cagccccagc ggaatggtcg
     5041 gatagcgggc gccgacgacc tcgcagga
//
LOCUS       DATMQB010000237         3677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1629873, whole genome shotgun sequence.
ACCESSION   DATMQB010000237 DATMQB010000000
VERSION     DATMQB010000237.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3677
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1629873"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..470)
                     /locus_tag="VNY79_07235"
     CDS             complement(<1..470)
                     /locus_tag="VNY79_07235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HWX72275.1"
                     /translation="MTARGLIIAAPHSGAGKTTVTLAVLAALRRRSVRVRAAKAGPDY
                     IDPAFHAAVTGAASVNLDSWAMPGDLLDALAAQAARDADLVVIEGVMGLFDGASGPEG
                     RRGVTADLAAHFRLPVVLLIDVAGQAQSAAAVVRGFAAHDAAVQVAGVILNRVAG"
     gene            complement(467..1261)
                     /gene="cobA"
                     /locus_tag="VNY79_07240"
     CDS             complement(467..1261)
                     /gene="cobA"
                     /locus_tag="VNY79_07240"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003516437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004851 - uroporphyrin-III
                     C-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0019354 - siroheme biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HWX72276.1"
                     /translation="MTAWDTLAAERTGVPVLAPGHVWLAGAGPGDPGLLTLDALAGLQ
                     QAEVIVYDALVDARVLALAGRQALLEFVGKRGGKASATQADISRRLVELARAGRRVLR
                     LKGGDPFVFGRGGEETAALAAAGIPFRVIPGITAGLAALAAAAIPATLRGVNRAVIFA
                     AAHAVEEDFDWAPLARTGQPIVLYMVMHSLERIAAALMRAGLAGSTPSAVIASATTPR
                     ERILISTLEKLAADAREQKLEPPAIVVIGDIVNARERLLSRGAAKT"
     gene            1315..2409
                     /locus_tag="VNY79_07245"
     CDS             1315..2409
                     /locus_tag="VNY79_07245"
                     /EC_number="2.1.1.195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016921818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-5B (C(1))-methyltransferase"
                     /protein_id="HWX72277.1"
                     /translation="MERQDRPLRRGWTTGTCAAAAAKAAFSALVTGDFPDPVEVTLPR
                     GERPSFALALTRKDEDSATAGIVKDAGDDPDVTHGALILATVRAGAPGSGVTFRAGEG
                     VGTVTRAGLPVPPGEPAINPVPRRMIRDAVAEVAAMAGCAIDAAVELSIPGGEVLAAR
                     TLNGRLGIVGGLSILGTTGIVVPYSCSAWIYSIRSGIDVARAAGLTHIAGATGTSSEA
                     AAQKLYGLPEIALIDMGDFVGGMLKYLRTHPVPRVTIAGGVGKMTKLAQGLTDLHSKR
                     GVVDHARLAEFARAAGGSQELCARIAGANNAAEVFILAQSERIALGDEVARAAQRTAE
                     RVVEGRDIAVEIVVFDRDQMLVGRAPFKSG"
     gene            complement(2652..3413)
                     /gene="cobM"
                     /locus_tag="VNY79_07250"
     CDS             complement(2652..3413)
                     /gene="cobM"
                     /locus_tag="VNY79_07250"
                     /EC_number="2.1.1.133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0046026 - precorrin-4
                     C11-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0009236 - cobalamin biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-4 C(11)-methyltransferase"
                     /protein_id="HWX72278.1"
                     /translation="MTVHFIGAGPGAADLITLRGRDLIARCPVCLYAGSIIPRALLAH
                     CPSGARIIDTAPLSLDEIEAEFAAAHASGLDVARLHSGDLSIYSALAEQMRRLRRRGI
                     PYTLTPGVPAFAAAAAALECELTVPEVAQTVVLTRVGGRASRMPEAEKLATFAATGAT
                     LVIHLAVHALETIVAELTPFYGGDCAAAVVVQATSPDERVLRGTLADISAKVAAERIE
                     RTALILVGRALGAEDFRDSALYDADYRRRFRGGAS"
     gene            complement(3410..>3677)
                     /locus_tag="VNY79_07255"
     CDS             complement(3410..>3677)
                     /locus_tag="VNY79_07255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cobalamin biosynthesis protein"
                     /protein_id="HWX72279.1"
                     /translation="PQAKRSEAGIMTAAEKLGVRVVLVPEVELKAASARTATRSARVL
                     ALIGVPSVAEAAALAAAGPSARLVSPRLVIGAATCALAASEAAP"
BASE COUNT          531 a         1312 c         1315 g          519 t
ORIGIN      
        1 ccggcgacgc ggttcaagat cacgccggcg acctgcaccg ccgcgtcgtg ggcggcaaag
       61 ccgcgcacga cggccgccgc cgactgcgcc tgccccgcca cgtcgatgag gaggacgacc
      121 ggcaggcgga aatgcgcggc gagatcggcg gtcacgccgc gccggccctc cggcccgctg
      181 gcgccgtcga acaggcccat cacgccttcg atcaccacga gatcggcgtc gcgcgcggct
      241 tgcgcagcca gcgcatcgag caggtcgccc ggcatcgccc aggaatcgag attgacactc
      301 gcggcgcccg tgaccgcagc atggaaggcc ggatcgatgt agtccggtcc ggctttcgcg
      361 gcgcgcacgc gaacgctgcg ccgccgcaac gctgcgagca cggcgagtgt caccgtcgtc
      421 ttgccggcgc cggaatgcgg cgccgcgatg atgagcccgc gcgccgtcac gttttcgccg
      481 cgccccggct gagcagccgc tcgcgcgcgt tcacgatgtc gccgatcacc acgattgccg
      541 gcggctcgag tttttgttcg cgggcgtcgg cggcgagctt ttccagcgtc gagatgagga
      601 tgcgctccct gggcgtcgtc gccgacgcga tcacggcgga tggcgtcgag ccggcgagcc
      661 cggcccgcat cagcgccgcg gcgatgcgct cgagactgtg catcaccatg taaagcacga
      721 tcggctgtcc ggtgcgcgcg agcggcgccc agtcgaaatc ctcctcgacg gcgtgggcgg
      781 cggcgaagat gaccgcgcgg ttgaccccgc gcagcgtcgc cgggattgcc gccgccgcga
      841 gcgccgcgag cccggcggtg atcccgggaa tgacccggaa aggaatgccg gcggccgcaa
      901 gcgcggcggt ttcctcgccg ccgcgaccga acacgaacgg atcgccgccc ttgagccgca
      961 acacgcgccg tcccgcgcgc gccagctcta ccagccgccg gctgatgtcg gcctgcgtcg
     1021 ccgaggcctt gccgccgcgc ttgccgacga attcgagcag cgcctgccgc ccggcgagcg
     1081 ccaatacgcg cgcatcgacc agtgcgtcgt agacgatcac ctcggcctgc tgcaggccgg
     1141 cgagcgcgtc gagcgtgagc agcccgggat cgcccggccc ggcgcccgca agccagacat
     1201 gaccgggcgc gagcaccggc acgccggtgc gctcggccgc caatgtgtcc cacgcggtca
     1261 tggattcgcg cgcccgtggt gacgttggcg gcgcgccgga ctaaagggga aatgatggag
     1321 cggcaggatc gccctttgcg ccggggctgg actaccggca cctgcgccgc ggcggcggcg
     1381 aaggcggcat tttccgcgct cgtcaccggc gactttcccg atccggtcga agtgacgctg
     1441 ccgcgcggcg agcgcccgag cttcgccttg gcgctgacgc ggaaggacga agactccgcg
     1501 accgccggaa tcgtcaagga tgccggcgac gatcccgatg tcactcatgg cgcgctcatc
     1561 ctcgccacgg tgcgcgccgg tgcgccgggg tcgggtgtga cctttcgcgc cggggagggg
     1621 gtcggcacgg tcacgcgggc cggtcttccc gttcctccgg gcgagccggc gatcaatccg
     1681 gtgccgcggc gcatgatccg cgacgcggtc gccgaagtcg ccgccatggc cggatgcgct
     1741 atcgatgccg cggtcgagct ctccattccc ggcggcgaag tactcgcggc gcggacgctc
     1801 aacggccgtc tcggcattgt cggcggcctc tcgatcctcg gcaccaccgg catcgtcgtg
     1861 ccctattcgt gctcggcgtg gatttattcg atccgcagcg gcatcgacgt ggcgcgcgcc
     1921 gccgggctca cgcacatcgc cggcgcaacc ggcacgagtt cggaagccgc cgcgcagaaa
     1981 ctctacggtc ttccggagat cgcgctgatc gacatgggcg acttcgtcgg cggcatgctc
     2041 aaatatctgc gcacgcatcc ggtgccgcgc gtcaccatcg ccggcggcgt cggcaagatg
     2101 accaagctcg cgcagggcct caccgacctg cattcgaagc gcggcgtcgt cgatcatgcg
     2161 cgcctcgccg aattcgctcg cgcggccggc ggctcgcagg agctttgcgc gcgcatcgcg
     2221 ggggccaaca acgcggccga agtctttatc ctggcgcagt ccgaacgcat cgcgctcggc
     2281 gatgaagtcg cccgcgccgc gcagcgcacc gccgagcgcg tggtcgaggg ccgcgacatc
     2341 gccgtcgaga tcgtggtgtt cgaccgcgac cagatgctgg tcggccgcgc cccgttcaag
     2401 tctggctagc gctacacgct ccgtcgtttc ctctcgccct tgctgttccc ctcccccttg
     2461 tggggagggg tcaggggtgg gggtcgggag gatttgcgca tgcgtcaacg aaagctctgg
     2521 cgcgggcgtc gacgttctag ggattgcctg tcgacccccc tccctaccct cccccacaag
     2581 gggggaggga ccagacgggc gcggcagttt gacctgcggc catctcatgg cacgccgtgc
     2641 tgcgtgaccg ctcaactcgc gcctccgcgg aagcgacgcc gatagtcggc gtcgtagagc
     2701 gcgctgtcgc gaaaatcctc ggcgccgagc gcgcggccga cgaggatgag cgcggtgcgc
     2761 tcgatacgct ccgcagcgac ctttgccgaa atgtcggcga gcgtgccgcg caaaacgcgc
     2821 tcgtccggcg atgtcgcctg gaccacgacg gcggccgcgc aatcgccgcc gtagaacggc
     2881 gtcagctccg cgacgatcgt ttcgagcgcg tggaccgcga ggtggatgac aagcgtcgcg
     2941 ccggtcgccg cgaacgtcgc gagcttctct gcttccggca tgcgcgaggc gcggccgccg
     3001 acgcgggtga gcacgacggt ttgcgcgacc tcaggcaccg tcagctcgca ttcaagcgct
     3061 gcggccgccg cggcgaaggc gggcacgccg ggagtgagcg tataggggat gccgcgccgc
     3121 ctgagccgtc gcatctgctc ggcgagcgcg ctgtagatcg aaaggtcgcc cgaatgcagg
     3181 cgcgccacgt cgagaccgct ggcgtgcgcg gcggcgaact cggcctcgat ctcgtcgagc
     3241 gacagcggtg cggtgtcgat gatgcgcgcg ccggaaggac aatgagcgag caaggcgcgc
     3301 ggtatgatcg agccggcgta gaggcagacc gggcagcggg cgatgaggtc gcgcccgcgc
     3361 agcgtgatca ggtccgccgc gcccggtcca gcgccgatga aatgcacggt catggcgccg
     3421 cctccgaagc ggcaagtgcg caggtcgccg cgccgatcac caggcgcggg ctgacgaggc
     3481 gggcggacgg gccggcggcg gcgagcgccg ccgcttcggc gaccgacggc acgccgatga
     3541 gcgcgagcac gcgcgcggag cgcgttgccg tgcgcgcgct cgcggctttg agttcaacct
     3601 cgggcacaag cacgacgcgg accccaagct tttccgccgc cgtcatgatt ccggcctcgc
     3661 tgcgtttcgc ctgcggc
//
LOCUS       DATMQB010000238         4255 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1630126, whole genome shotgun sequence.
ACCESSION   DATMQB010000238 DATMQB010000000
VERSION     DATMQB010000238.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4255
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1630126"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1463)
                     /locus_tag="VNY79_07260"
     CDS             complement(<1..1463)
                     /locus_tag="VNY79_07260"
                     /EC_number="1.1.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018261766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009331 - glycerol-3-phosphate
                     dehydrogenase complex [Evidence IEA];
                     GO_function: GO:0004368 - glycerol-3-phosphate
                     dehydrogenase (quinone) activity [Evidence IEA];
                     GO_process: GO:0006072 - glycerol-3-phosphate metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase"
                     /protein_id="HWX72280.1"
                     /translation="MVEFDLAIIGGGINGVGIARDAAGRGLKVLLVEQSDLASGTSSA
                     SSKLIHGGLRYLEQGALRLVRASLAEREVLLRMAPHLIRPLRFVMPLDEARRSPQLIR
                     LGLFIYDRLGRRQILPPSRSLDLITDEAGQPLKRQFHRAYEYSDCFADDSRLVMLNAV
                     DAAERGATIRTRTRCVRAERGPRGWRLVLTTQGQRETATARVLVNATGPWAEMVTDTL
                     LKQPPRRLLRLDKGTHVVVRRLYDHDRAYILQTADGRVVFTIPFERDFTLIGTTDEAY
                     SGDPAVAVPTAEDISYLCGAVNEYFRTVVSAANAVWAFAGVRALYGEGARKPQDIGRD
                     YTLFLDCGFRKAPLLTVYGGKLTTYRRLAEDVLARLARFFGRSQPWTAHTPLPGGDFP
                     YNGTAALIQRTRQRWPFLTDDHLRRLVGAYGTRVENILNTATRLDDLGMRFGADLTAA
                     EVRYLMTKEWAQTADDVLWRRSKLGLRFTDAQRAMLDR"
     gene            1577..2287
                     /locus_tag="VNY79_07265"
     CDS             1577..2287
                     /locus_tag="VNY79_07265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015314261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HWX72281.1"
                     /translation="MDFRNRHVVITGGAGALGAAVVGALVEAGAICHVPCHDEAEAQR
                     FPLRENRQVVLTVTGSLADDEAVGSFYQAVTPLWASIHLAGGFAAGPLRDAAPAALRQ
                     QIDMNLVTCLLCCRAALTAMTRGGAEGGGGRIVNVAARPGLEWRSGAGMVAYAASKAA
                     VAALTTALAEEVVKDGILVNAVAPSIMDTPANRRAMPKADYSLWPKVEEVAATILFLA
                     SPDNRVTRGAIVPVYGKS"
     gene            complement(2343..2624)
                     /gene="rpsU"
                     /locus_tag="VNY79_07270"
     CDS             complement(2343..2624)
                     /gene="rpsU"
                     /locus_tag="VNY79_07270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006339042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000314 - organellar small ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022627 - cytosolic small ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HWX72282.1"
                     /translation="MQVLVRDNNVDQALKVLKKKMQREGVFREMKLRGHYEKPSERRV
                     REKAEAIRRARKLARKKLQREGLLPMKPRPVAGAPGRGGPARTPRPPRF"
     gene            complement(2897..3091)
                     /locus_tag="VNY79_07275"
     CDS             complement(2897..3091)
                     /locus_tag="VNY79_07275"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72283.1"
                     /translation="MIDHEDFSVVVKNRASPPKPWRWEIYRAGRTSPIEHSEVFFESV
                     AEATRAGKVALQSLLSDYPG"
     gene            complement(3425..3685)
                     /locus_tag="VNY79_07280"
     CDS             complement(3425..3685)
                     /locus_tag="VNY79_07280"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72284.1"
                     /translation="MASRQIKMPVKDGSDKDVDEAPSQRKRPERGRYLLQVDRQTKGS
                     YPTAEAAQSAAQVIKIGYPIVQVSVYDSVEYTHTLVEAPAAS"
     gene            3902..>4255
                     /locus_tag="VNY79_07285"
     CDS             3902..>4255
                     /locus_tag="VNY79_07285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018408123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine gamma-synthase"
                     /protein_id="HWX72285.1"
                     /translation="MAGGARAQTTQIWTVPEVGALPYDANGLLVRRGRDLITATYAYI
                     GPNVPDVPQRYAGNNLACSNCHLSAGVRKFALPLFGLYGEFPQYSPRSATEITIEDRI
                     NSCMTRSMNGQPLPPA"
BASE COUNT          731 a         1363 c         1402 g          759 t
ORIGIN      
        1 cggtcgagca tggcgcgctg cgcgtcggtg aagcgcaagc cgagcttcga gcgacgccac
       61 agcacgtcgt cggcggtttg cgcccattcc ttcgtcatca ggtagcgtac ctcggcggcc
      121 gtaaggtcgg cgccgaagcg catgccgaga tcgtcgagcc gggtggccgt gttcaggatg
      181 ttctccacgc gcgtgccgta ggcgccgacg agccgccgca gatggtcgtc ggtgaggaac
      241 ggccagcgct gccgcgtgcg ctgtatcaac gccgccgtgc cgttataggg gaagtcaccg
      301 ccgggcaagg gcgtatgcgc ggtccatggc tgcgagcgcc cgaagaaacg ggcgagccgt
      361 gcgagcacgt cctcggcgag gcggcggtag gtcgtcagct tgccgccgta gaccgtcagc
      421 agcggcgcct tgcggaagcc gcagtcgagg aacagggtgt agtcgcgtcc gatgtcctgc
      481 ggcttacggg cgccttcgcc atagagcgcg cgcacgccgg cgaacgccca aaccgcgttg
      541 gcggcactga ccaccgtgcg aaaatactcg ttcacggcgc cgcacagata gctgatgtct
      601 tccgccgtcg gcacggcgac ggcagggtcc ccggaatagg cctcgtcggt ggtcccgatc
      661 agcgtgaaat cgcgctcgaa cgggatggtg aacaccactc tgccatcggc cgtctgcagg
      721 atataggcgc ggtcgtgatc gtacaggcgc cgcaccacga cgtgagtgcc tttgtcgagc
      781 cgcagcagcc ggcgcggcgg ctgcttcagc agcgtatcgg tcaccatttc cgcccagggg
      841 cccgtggcat tgaccaagac ccgcgccgtc gccgtttcgc gctggccctg cgtggtgagg
      901 acgagccgcc agccgcgcgg cccgcgctcg gcgcgcacgc agcgtgtgcg cgtgcggatg
      961 gtcgcgccgc gttcggcggc atcgacggcg ttgagcatga cgaggcgcga atcgtcggcg
     1021 aagcagtcgg aatactcgta ggcgcgatga aattgccgct tcagcggctg acccgcttcg
     1081 tcggtgatga gatcgagtga gcgcgacggc ggcaggatct ggcgccggcc gagccggtcg
     1141 tagatgaaaa gaccgaggcg gataagctgc ggcgagcgcc tcgcctcgtc gagcggcatg
     1201 acgaagcgga gcggccggat gaggtgcggc gccatgcgca gcagtacttc gcgttcggcg
     1261 agcgaggcgc gcaccaggcg caaggcgccc tgctcgagat agcgcagccc gccatggatg
     1321 agtttcgagg atgccgacga ggtgccggag gcaaggtcgc tctgctcgac cagcaacacc
     1381 ttgaggccgc ggccggcggc atcgcgcgca atgccgacgc cgttgatgcc gccgccgatg
     1441 atggcgagat cgaattcgac cacggaacgc tccctcccgc aggatagcaa agcccatgtt
     1501 ttcgcgagcg ggcaagcgca acgccgtctt gcctccggcc gcggatgggc gatgatggcg
     1561 acaggaggcg tgcgatatgg atttccgcaa tcgtcatgtg gtgatcaccg gcggcgccgg
     1621 cgcgcttggc gccgccgtgg ttggagcgct cgtcgaagct ggcgcaatat gccacgtgcc
     1681 atgccacgac gaagcggagg cgcaacgctt cccgctgcgc gagaaccggc aggtcgtgct
     1741 gaccgtcacc ggcagcctcg ccgacgacga ggcggtcggc agcttctacc aggccgtcac
     1801 gccgctctgg gcctcgatcc accttgccgg cggctttgcc gccggaccgt tgcgcgacgc
     1861 cgccccggcg gcgctgcggc agcaaatcga catgaatctc gtcacttgcc tcttgtgctg
     1921 tcgcgctgcc ttgaccgcca tgacgcgcgg cggtgccgag ggcggcggcg gccgcatcgt
     1981 caatgtcgcc gcccgcccgg gccttgagtg gcgcagcggc gccggcatgg tcgcctatgc
     2041 cgcgagcaag gcggcggtcg ccgcgcttac caccgcactc gccgaggaag tcgtcaagga
     2101 cggcatcctg gtcaacgccg tcgcgccttc gatcatggat acgcccgcca accggcgggc
     2161 catgcccaag gccgactaca gcctctggcc gaaggtcgaa gaggtcgcgg cgaccatcct
     2221 gttcctcgcc tcgccggata accgcgttac ccgcggcgcc atcgtgccgg tgtacgggaa
     2281 gtcgtgaagc cggcgttgat gcccgcctcg aacccgctca ttccagcgga agcgctccgc
     2341 gatcagaagc gcggtggccg tggcgtacgc gcggggccgc ctctaccggg cgcgcccgcg
     2401 accggccggg gtttcatagg caacaggccc tcgcgctgca acttcttgcg ggcgagtttg
     2461 cgggcgcggc ggatggcttc cgccttttcg cggactctgc gctcggacgg cttttcgtag
     2521 tggccgcgca gcttcatctc gcggaacacg ccctcgcgct gcatcttctt cttcagcacc
     2581 ttgagcgctt ggtcgacatt gttgtcacgg acgagaacct gcacgcggcg ttcctcttcg
     2641 atcgagcggt tgagaggccg agggccaggg cgctcggggc gctggcgcac ggatgaacac
     2701 gattcgggtg ccgccgacgg cgcccgccgt aggaaacaag accgatattc ggattcgtgc
     2761 ctgccgatgg gcaccatgcg gccgattgca acgggcggag acttcggcag gtcgccgttt
     2821 tttgggcaat ccaacaagct gtgcttggtt ctagcgatac cgccagactt gtcaaagact
     2881 tcctgtcggc cctgcgtcag ccggggtagt cgctcaagag cgactgcaac gccacttttc
     2941 cggcgcgggt agcttcggcg acggactcga aaaaaacctc ggagtgctcg atcgggctgg
     3001 ttcggccggc gcgatagatc tcccatcgcc acggcttggg tggcgaggcg cggtttttta
     3061 cgacaaccga aaagtcttca tgatcgatca taggcagaga cattaacaca cgatactgca
     3121 atagtggcac tgcaatagtg gcccgcaaag acggcaatct gaaaatagaa aacgcgtatc
     3181 ggacttcttc gcaatctcga cgtcgcgctc aaaatgcgca cgaaacacca ctcaaaatcc
     3241 gttattgaaa ggaaatactg tgtcaaatcc gcatcaggga gccgcgacga gcctcgcgac
     3301 caaggccatc tatatgttgt tcgcgaccgt tctcctcgtc tttgtcggca tgttggcgct
     3361 aacggtgttg catccctgac cgaccgtcat cgcactggtg acggcggtct gagaaacacc
     3421 ttcatcacga cgcggccggt gcttccacta acgtgtgggt gtactcgacg ctgtcataga
     3481 ccgagacctg aacgatcggg tagccgatct tgattacttg cgccgccgat tgcgcggctt
     3541 ccgccgtcgg gtaggagcct ttggtttgcc ggtcgacctg gagcagatag cggccgcgct
     3601 ccggccgttt gcgctgtgac ggcgcttcgt cgacgtcttt gtcggacccg tcctttactg
     3661 gcatcttgat ttggcgcgag gccattcgct gctcctttgt gtgggggaag gcctcatata
     3721 ggcctatccg gcgtcagccg ccaggaggct atagggtttc cacaatggct gaccgtcgat
     3781 gctgacacgg gcaactgcgt cgaaaacgcg cgccaaatca gggtcaggag ctgtcatgag
     3841 aattcgtgtt gctggtgcgc caattgtcca agcgatcatc actctatgga tcctcgcaat
     3901 attggccggc ggcgcgcggg cgcaaaccac gcaaatctgg accgtcccgg aggtcggcgc
     3961 gctgccctac gatgcgaacg gtcttctggt gaggcggggc cgtgatctca tcactgccac
     4021 ctatgcctat atcggcccta atgtccccga cgtgccgcaa cgttatgccg gcaacaatct
     4081 cgcctgctcc aattgccacc tctcagcggg cgtgcggaag ttcgcgctcc cgctgtttgg
     4141 tctatacgga gagtttccgc aatatagccc gcgctctgcg accgaaatta ccatcgaaga
     4201 ccgcatcaat tcctgcatga cgcggagcat gaacggtcag ccgctcccgc cggcc
//
LOCUS       DATMQB010000239         6976 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2254445, whole genome shotgun sequence.
ACCESSION   DATMQB010000239 DATMQB010000000
VERSION     DATMQB010000239.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6976)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6976)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6976
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2254445"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1362
                     /locus_tag="VNY79_07290"
     CDS             <1..1362
                     /locus_tag="VNY79_07290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PleD family two-component system response
                     regulator"
                     /protein_id="HWX72286.1"
                     /translation="TARVLVVDDVAANVKLLEARLSAEYFDVITAMSGEQALAICARA
                     ECDLVLLDVMMPDLDGFEVCRRLKTNPATHHIPVIMVTALDQPADRVRGLEAGADDFL
                     TKPIPELALIARVRSLARLKMITDELRMRAVTSREIGMESPEREAVSDTGRNGRVLIV
                     DDRPASHERIAAMLAEEQSVDVEVDPSEALFRAADGNYDLLIVSLGLENFDALRLCSQ
                     IRSLDRTRNMPILAITEPDSNARMVRGLEIGVNDYLMRPIDKSELLARARSQVRKRRY
                     TERLRDNVQISIEMAITDALTGLFNRRYMESHLAGLLEQASARGKPLAVLVTDIDYFK
                     SINDTHGHDAGDDVLREFALRIKRSIRGIDLACRYGSEEFVVVMPETDMAVAAMVAER
                     LRRRRAFAIHEGARSIPVTISIGTAALRGADDNAAGVLKRADQALYRAKRDGRNRVVP
                     DAA"
     gene            complement(1962..2129)
                     /gene="rpmG"
                     /locus_tag="VNY79_07295"
     CDS             complement(1962..2129)
                     /gene="rpmG"
                     /locus_tag="VNY79_07295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HWX72287.1"
                     /translation="MAKATTIKVKLVSSADTGFYYVTRKNSRTMTDKLVKKKYDPVAK
                     KHVEFREGKIK"
     gene            complement(2243..3013)
                     /locus_tag="VNY79_07300"
     CDS             complement(2243..3013)
                     /locus_tag="VNY79_07300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HWX72288.1"
                     /translation="MSDDIESAVPGGRLIDPNEADRGPRGDETHPYLRPRDSATLILI
                     DRTAPVPKVLLGRRHSRHKFVPGKFVFPGGRVEISDRKMPFARPLDERHTARLLHKLK
                     RPSVTKAAALALAAVRETYEETGLMLGTHSANPIAAPAGPWEAFARAHVIPDLGAIHF
                     VARAITPTNRPRRFDSRFFAAEIGAVAHRAEGFVGPEAELVELVWLPITEASRLDMPR
                     ITTIVLEDLRDRIAAGMSHDHPVPFYRMEHRRPVREIL"
     gene            complement(3010..5268)
                     /gene="rnr"
                     /locus_tag="VNY79_07305"
     CDS             complement(3010..5268)
                     /gene="rnr"
                     /locus_tag="VNY79_07305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008997 - ribonuclease R activity
                     [Evidence IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HWX72289.1"
                     /translation="MKQSHLPSREELLAFIREHAGKVGTREIARAFGAKNADRAELKR
                     MLRELADEGQVERRRKRLHHGGTLPSVVLADITGRDADGEFLARPTEWDEEAHGAAPV
                     IRVATPRRARPGETAGVGDRALLRIQRTSDDETSGRVIKLIDRAKHRALGIFRGVPGG
                     GGRLVPIDKKQLGREIAIAPDATAGAADGDLVAVEVAHQGRFGLPSGSVVERLGSLKS
                     ERAVSLIAIHAHGIPHVFSRAALAEAEAARPATLGGREGMREDWRKIPFVTIDPPDAK
                     DHDDAVYAEPDPDPRNAGGHIVSVAIADVAHYVRPGSALDRAAAERGNSVYFPDCVVP
                     MLPERISNDLCSLRPGEDRPALAVRMVIGADGRKRSHTFHRVLIRSAARLHYEQAQLA
                     VSGRTDEVTEPIVTPIIAPLYAAYRAVCRARDERGPLDLEIPERKIMLKSDSTVDRVI
                     MPQRLESHRLIEEFMILANVAAAETCERARVPLVYRVHDEPAAEKVNALREFLATLEI
                     ALPKGGTLRPDAFNRILARVKGRDVERLVNEVVLRTQAQAEYSPENFGHFGLALRRYA
                     HFTSPIRRYADLIVHRALIRALKLGPDGLAEGTDTGALAEIAASISVAERRAMKAERE
                     TADRLIAHFLADRIGAIFDGHISGVTRAGLFVELDETGADGFVPARTIGDEYFRYNEA
                     SRAFVGTSATHRLGDAVMVELVEAAPVAGALRFKLLRDDRAAARGAGHRSPRQRTIAH
                     RPERRGRRGRTS"
     gene            complement(5315..>6976)
                     /locus_tag="VNY79_07310"
     CDS             complement(5315..>6976)
                     /locus_tag="VNY79_07310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="topoisomerase C-terminal repeat-containing
                     protein"
                     /protein_id="HWX72290.1"
                     /translation="RRYETKAKNAQEAHEAIRPTDFAFRPGETKRFLDPDQAKLYELI
                     WLRTVASQMESAELERTTADINAKVASRLLELRATGTVVKFDGFLAVYQEGRDEDPDD
                     EEARRLPEMSAGERLSKRSIAATQHFTEPPPRYSEASLVKRLEELGIGRPSTYASILQ
                     VLRDRKYVRLDKRRLFPEDRGRIVVAFLESFFAKYVEYDFTAGLEEQLDLIANHEVAW
                     REVLRDFWRGFIGAVDEIKDLKISQVIDALDELLAPHLFPASADGSDPRRCPSCGNGR
                     LTLKLSKYGAFIGCANYPECRYTRPLSAPGEGGAEIGTKKLGEDPDTGLEVALRSGRF
                     GPYVQLGEATDGEKPKRASLPKNVTPEDVELDFALALLSLPREVGRHPEGGEPIRAGI
                     GRFGPYVQHDKTYANLESGDDVFNIGLNRAVTLIAEKRAKGPRFRRFGADPGRPLGEH
                     PTKGGPVVAKNGRYGPYVSHDGVNATLPHDKTPETVTLEEAVSLLDARAERGPAPHAR
                     PRRAAKRAGPGAARQAKRPAKNPAARPPKGRVAGKSSRKTTHAAE"
BASE COUNT         1070 a         2312 c         2373 g         1221 t
ORIGIN      
        1 actgcccgtg ttctcgtcgt cgatgacgtt gccgccaacg tcaagctgct cgaggcacgg
       61 ctgtcggccg aatatttcga cgtgatcacc gcgatgagcg gcgagcaggc gctggcgatc
      121 tgcgcgcgcg ctgaatgcga cctcgtgctg cttgacgtga tgatgcctga cctcgacggc
      181 ttcgaggtgt gccggcggct caagaccaac cccgccacgc accacattcc ggtgatcatg
      241 gtgacggcgc tcgatcagcc tgccgaccgc gtgcgcgggc tcgaggccgg cgccgacgat
      301 ttcctgacca agccgatccc cgagttggcg ctgatcgcgc gcgtgcgctc gctcgcccgg
      361 ctcaagatga tcaccgacga gctgcgcatg cgcgcggtga cgtcgcgcga gatcggcatg
      421 gaatcgccgg agcgcgaggc ggtctccgat accggccgca acggccgcgt gctcattgtt
      481 gacgatcgtc ccgcctcgca tgaacgcatc gccgcaatgc tcgccgagga gcagagcgtc
      541 gacgttgagg tcgatccgag cgaggcgctg ttccgcgccg ccgacggcaa ctacgacctg
      601 ctcatcgtat cgctggggct ggaaaatttc gacgcgctgc ggttgtgcag ccagatccgc
      661 tcgctcgacc gcacccgcaa catgccgatc ctcgctatca ccgagccgga cagcaacgcg
      721 cgcatggtgc gcggcctcga aatcggcgtg aacgattatc tgatgcgccc gatcgacaag
      781 agcgagctgt tggcgcgggc gcgcagccag gtgcgcaagc gccgctacac cgaacggctg
      841 cgcgacaacg tgcagatctc catcgagatg gcgatcaccg acgcgctcac cggcctgttc
      901 aaccgccgct acatggaaag ccatctcgcg ggcctgctcg agcaggcaag cgcgcgcggc
      961 aagccgctcg ccgtgctggt gaccgacatc gactatttca aatcgatcaa tgacacccac
     1021 ggccatgatg ccggtgacga cgtgctgcgc gagttcgcgc tgcgcatcaa gcgctcgata
     1081 cgcggcatcg atttggcctg ccgctacggc agcgaggagt tcgtggtggt catgcccgag
     1141 accgacatgg ccgtcgccgc catggtggcg gagcgcctgc gccgccgccg agcgtttgcg
     1201 atccacgagg gtgcgcgcag cattccggtg acgatctcga tcggcaccgc cgccttgcgc
     1261 ggagccgacg acaacgccgc cggcgttctc aagcgcgccg atcaggcgct ctatcgcgcc
     1321 aaacgtgacg ggcgaaaccg ggtggtgccg gacgcggcgt gatcgccgcc gcggcggtgg
     1381 cgcgcgcgtc ctgtcaagct gcgccgccct gaggccagcg cggaagcggc attatggtta
     1441 acgcagattc ggctttttgg cggaattttg gcagttgatt tcctcggcca ttaagttacg
     1501 tttgcaacgg taaatcggaa actgtggact ggcgccttcc cgcaagctgc acagcggccg
     1561 ggaagggttc ggcgcgttcg ataaccctac ggagtgctca ggtccgccgc atctcctggg
     1621 tccgtggggt tcggccggcc tgggggcggt gcgagtggcc tcctcatgac accgctcccg
     1681 gccggccacc ttgccggttc cggcgaacgc tcagcatttg aggaaggcgc tcggcacccg
     1741 cgccgtatcg tgaggaacct gatcgataaa gaagtgtccg cccggcagcg tttgcgccgc
     1801 gacgttgaga caccgctttc ggcaggcccg actcgaagga actgcagcag caggaccggg
     1861 aggccgcctc cggcgatcac gcaattgatg tcgacgtcac ccgggcggag ccgccggtac
     1921 tcgaaattct caaactccgc cggtcgggcc gttcccggcg cctacttgat ctttccttcg
     1981 cgaaactcga cgtgtttttt cgcgaccggg tcgtatttct tcttgacgag cttgtcggtc
     2041 atcgtccgcg aattcttgcg cgtcacgtag taaaagccgg tatcggcgct cgacaccagc
     2101 ttgactttga tcgttgtggc tttggccatg accgaacctt gaaatcgctc cgcttgctga
     2161 ccggcaacct attcgccggc cgccgaatgt caagaaagcg cgcgcggccg cgccagctcg
     2221 ctttcgcgcc tcatcgccga ggttacagga tttcccgcac cggacgtcgg tgctccatcc
     2281 ggtagaacgg caccggatgg tcgtggctca tgccggcagc gatgcggtcg cgcaggtctt
     2341 cgagcacgat cgttgtgatg cgcggcatgt cgaggcggct cgcctcggtg atcgggagcc
     2401 agaccaactc cacaagttcc gcctccggcc cgacgaagcc ttcggcccgg tgagcgacgg
     2461 cgccgatctc ggctgcaaaa aagcggctgt cgaagcgtct cgggcggttc gtcggcgtaa
     2521 tggcgcgggc gacgaaatgg atcgcgccca ggtcggggat gacgtgcgcg cgggcgaaag
     2581 cttcccacgg accggcaggc gccgcgatcg gattggctga atgggtccca agcatcaggc
     2641 cggtctcttc ataggtttcg cgcacggcgg ccaaggcaag ggcggcggcc ttcgtcacgc
     2701 tcgggcgctt cagcttgtgc agcaggcgcg cggtgtgccg ctcgtccaac ggcctcgcga
     2761 aaggcatttt ccggtcgctg atttctaccc ggccgccggg aaagacgaat tttccgggca
     2821 cgaatttgtg ccggctgtgt cggcgcccaa gcagcacctt cggcaccggc gcggtacggt
     2881 cgatgagaat gagcgtcgcc gagtcccgcg gccgcagata gggatgcgtc tcatcgccgc
     2941 gcggaccccg gtccgcttcg ttcggatcga tcagcctgcc gccggggacc gcgctttcga
     3001 tgtcgtcgct catgaggtcc tgcctcgccg tccgcgccgc tccggccggt gcgcgattgt
     3061 ccgctgccgc ggcgatcgat gtccagcccc gcgcgccgcg gcccgatcgt cgcgcagcag
     3121 cttgaaccgc agggctccgg cgaccggcgc cgcctcgacc agctcgacca tcaccgcgtc
     3181 gccgagccgg tgggtcgccg aagtaccgac gaaggcgcgg ctcgcctcgt tgtagcggaa
     3241 atattcgtcg ccgatggtgc gggcgggcac aaagccgtcg gcgccggtct cgtcgagctc
     3301 gacgaacaga ccggcgcgcg tcacgccaga gatatggcca tcgaaaatcg cgccgatgcg
     3361 gtccgccagg aaatgcgcga tcagccggtc ggctgtttcg cgctcggctt tcatcgcgcg
     3421 ccgttccgcc accgaaatgc tggcggcgat ttccgcaagg gcgcctgtgt ccgtgccttc
     3481 ggcaaggccg tcgggaccga gcttgagcgc gcggatcagg gcgcgatgca cgatcaggtc
     3541 ggcgtagcgc cggatcggag aagtaaagtg cgcgtagcgg cgcagcgcga gcccgaaatg
     3601 gccaaaattt tccggcgaat attccgcctg cgcctgcgtg cgcaacacca cttcgttgac
     3661 gagccgctcg acgtcgcggc ccttgacccg cgccaggatg cggttgaacg cgtccggccg
     3721 cagcgtgccg cccttcggca gcgcgatctc gagcgtcgcc aggaattcgc gcaacgcgtt
     3781 gaccttttca gcggccggct cgtcgtggac gcgatagacg agcggaacgc gcgcgcgctc
     3841 gcaggtttcc gccgcggcca cgttggcgag gatcatgaac tcctcgatca gccggtgcga
     3901 ttccagccgc tgcggcatga tcacgcgatc gaccgtgctg tccgacttga gcatgatctt
     3961 gcgctcgggg atctcgaggt cgagcggccc gcgctcgtcg cgggcgcggc acaccgcccg
     4021 gtacgcggca taaagcggcg cgatgatcgg cgtgacgatc ggctcggtga cctcgtccgt
     4081 cctgccggaa acggcgagtt gcgcctgttc gtaatggagc cgcgcggcag agcggatgag
     4141 cacgcgatgg aaggtgtgcg agcgtttgcg gccgtcggcg ccgatcacca tgcgcaccgc
     4201 gagcgccggc cggtcttcgc ccgggcgcag cgaacacaag tcgttggaga tgcgctccgg
     4261 cagcataggc acgacgcagt cgggaaagta gaccgagttg ccgcgctcgg ccgcggcgcg
     4321 gtcgagcgcc gagccgggcc gcacgtaatg cgccacgtcg gcgatggcga cactgacgat
     4381 gtggccgccc gcattgcgcg ggtccgggtc gggctcggcg tagacagcgt cgtcatggtc
     4441 cttggcgtcg ggtggatcga tggtgacgaa cgggattttt cgccagtcct cgcgcatgcc
     4501 ctcgcgcccg ccaagcgttg ccggccgcgc cgcctccgcc tccgcaagcg ccgcccggga
     4561 aaaaacatgc gggatgccgt gggcgtgaat cgcgatcagg ctgaccgcgc gctcgctctt
     4621 gagcgagccg agccgctcca cgaccgagcc cgacggcagt ccgaaccggc cttggtgggc
     4681 gacctcaacg gcaacgagat cgccgtcggc cgcgcctgcg gtcgcgtcgg gtgcaatggc
     4741 gatttcgcgg ccgagctgct tcttgtcgat cggcaccagg cggccgccgc cgccggggac
     4801 gccgcggaaa atgccgagcg cgcggtgctt ggcgcggtcg atcagcttga tgacgcgtcc
     4861 gctcgtctcg tcatcgctcg tccgctggat gcgcagcagc gcgcgatcac cgacgccggc
     4921 ggtttcgccc ggccgggcac ggcgcggtgt cgcgacgcgg atgacgggag cggcgccgtg
     4981 cgcttcctcg tcccattcgg tcggccgcgc cagaaactcg ccgtctgcgt cgcggccggt
     5041 gatgtcggcg agcaccaccg acggcaaggt gccgccgtgg tgcagccgct tgcgccggcg
     5101 ctcgacctgg ccctcgtcgg caagctcgcg cagcatgcgc ttgagctccg cccgatcggc
     5161 gttcttggcg ccgaaggcgc gcgcgatttc gcgcgtgccg accttgccgg catgctcgcg
     5221 gatgaaggcg agaagctcct cgcgcgaggg aaggtgggat tgtttcatgg gccgctcgtt
     5281 ggccatatcc tggccagggc cccttatgta ggcgttattc ggcagcgtgc gtggtcttgc
     5341 gtgaggattt gccggcgaca cgcccttttg gcggccgcgc ggccggattc tttgcgggcc
     5401 ttttcgcctg ccgcgctgct ccaggcccgg cgcgcttcgc ggccctgcgc ggccgcgcat
     5461 gcggggccgg accccgctcc gctctggcgt cgaggagcga aaccgcttcc tcaagcgtca
     5521 cggtttcagg cgtcttgtca tgcggcaggg tggcattgac gccatcatgg ctgacatacg
     5581 gcccgtagcg gccgttcttg gcgacgacgg gtccaccctt ggtcggatgc tcgccgagcg
     5641 ggcggcccgg gtcggcgccg aagcgacgga agcgcggacc cttcgcgcgc ttttccgcga
     5701 tgagcgtcac cgcccggttg aggccgatgt tgaacacgtc gtcgccggat tcgagattgg
     5761 cgtaggtttt gtcgtgctgc acgtaaggtc cgaaccggcc gatgccggcc cggatcggtt
     5821 cgccgccctc gggatggcgg ccgacctcgc gcggcagcga aagcagcgcg agcgcgaaat
     5881 cgagctccac atcctctggg gtcacgttct tcggcaggct ggcgcgtttc ggtttttcac
     5941 catcggtggc ctcgccaagc tgcacgtagg gaccgaagcg gccgctgcgc agagctactt
     6001 cgaggccggt gtcgggatct tcgccgagtt ttttggtgcc gatctcggcg ccgccctcgc
     6061 ccggcgccga cagcgggcgg gtatagcggc actccggata gttcgcgcag ccgatgaagg
     6121 ccccgtactt cgagagcttg agggtgagcc ggccgttgcc gcaactcggg catcgacgcg
     6181 gatcgctgcc gtcggcgctc gccgggaaga gatgcggcgc cagcagctcg tcgagggcgt
     6241 cgatcacctg ggagattttc aaatccttga tctcatccac agcgccgatg aagccgcgcc
     6301 agaagtcgcg cagcacctcg cgccacgcca cttcgtggtt ggcgatgaga tcgagctgtt
     6361 cctcaaggcc ggcggtgaaa tcgtactcga cgtatttggc gaagaagctc tcgaggaagg
     6421 cgaccacaat gcgcccgcgg tcctccggaa acagccggcg cttgtcgagc cgcacatatt
     6481 tgcggtccct gagcacctga aggatggagg cgtaggtcga agggcggccg atcccgagtt
     6541 cttccaggcg tttgaccagt gatgcttccg aatagcgcgg cggcggctcg gtaaaatgct
     6601 gggtcgcggc gatcgagcgc ttgctgagcc gctcgccggc gctcatttcc ggcagccggc
     6661 gcgcctcctc gtcatccggg tcttcgtcgc gtccttcctg atagacggca aggaagccgt
     6721 cgaacttgac cactgtcccc gtggcacgca gctcaaggag gcggctcgcc accttcgcat
     6781 ttatgtcggc cgtcgtgcgc tcgagttcgg ccgattccat ctggctcgcg acggtgcgca
     6841 gccagatcag ctcgtagagt ttcgcctggt ccggatcgag aaagcgcttg gtctcgcccg
     6901 gtcggaaggc aaaatcggtc gggcgaatgg cctcgtgcgc ctcttgcgcg ttcttggcct
     6961 tggtctcgta gcgccg
//
LOCUS       DATMQB010000240         5515 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1017771, whole genome shotgun sequence.
ACCESSION   DATMQB010000240 DATMQB010000000
VERSION     DATMQB010000240.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5515)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5515)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5515
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1017771"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1019
                     /locus_tag="VNY79_07315"
     CDS             <1..1019
                     /locus_tag="VNY79_07315"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HWX72291.1"
                     /translation="PLDGRGIFSNSITIYFRADLRRQLGGKPISIVYINNPMFGGFFR
                     LQKDCQSGFMVVNTVGDPKVDPVKAANAAADTSEERLIELVRAGAGVPDLDVKIDGVA
                     RWRATSDVAREFQRGRVFIVGDAAHLMPPNGGFGGNTGIHDAHNLAWKLAMVLKGVAG
                     PALLDSYEAERKPVAKFTVEQAYTRYVTRTATYLGATDYEPLAHDFNVELGYIYHSPA
                     ISPDNGDGKGHDDPRLTLGRPGARAPHLFLERDGKRISTLDLFGRKLRPSGRARGRSL
                     VRSRPHRSSPLERCATGRPSRRPHGFGRSRESVLQRVRAASDRRLPGSARRFCRLASK
                     SERA"
     gene            complement(1073..1822)
                     /locus_tag="VNY79_07320"
     CDS             complement(1073..1822)
                     /locus_tag="VNY79_07320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HWX72292.1"
                     /translation="MIGWRRRVGKQEEEHLATIVLAHGAWSSAWAWKKMRPLMAAAGH
                     EFFAPSYTGLGERAHLAGPANDLETHIQDVLGVIKYEDLRDVVLIGHSYGGMAVTGVA
                     DQARDRVAGLIYLDAFVPANGQALIDFLGAEERQRLLGSVKTGDGWRVTPNPIPPDTA
                     AEDIAWVSQFRMPQSVRCFEQPIRLQAEPAVPRSYIHCTRYADKTPFKQFADHARHTA
                     GWRCYELDASHSPNVTAPGALMELLQRILQR"
     gene            1950..3167
                     /locus_tag="VNY79_07325"
     CDS             1950..3167
                     /locus_tag="VNY79_07325"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HWX72293.1"
                     /translation="MTPDGRITELHLWAVREGLRRAPAAAVFEDFCRRLAAAGVPLWR
                     AFVGMRTLHPQWAGYTYTWWRDRDVVDPSPREHGEAYDQDLRESPYTYLRDTALGGGV
                     PQRLRRRLAGSGARHDFAVLEQLAIAGGTDYLAELIPVGMATEAFPDSGLGFSFATDR
                     PEGFSDDDLHLIEAVLPAVSLAIVSDAEHTMAAGLLAAYLGSDAGRRVHAGVVERGSV
                     ESIRAVLWYADIRGFTPIADATPGPVLVEMLDDIFETLAAPLRRHRGEVLKFLGDGML
                     ASFAFVDATRDETCGHALNAATEAMHDLDRLNADRARIGKPVAVVDLALHLGEVLYGN
                     VGAVDRLDFTVIGPAVNEVARIEKLCEPLGRRVLVSAELAAATRDSARLEPLGAHLLR
                     GVREPKEIFALRL"
     gene            complement(3246..4208)
                     /locus_tag="VNY79_07330"
     CDS             complement(3246..4208)
                     /locus_tag="VNY79_07330"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72294.1"
                     /translation="MAIAAALAIVVLIVAGALLMRGGTPATRVVEYAMSDSRDAPMAI
                     AAAADGTIWFTIDQAESIGRVRGGRIDLLRTPGRNFEPLGLAVAGDGSAWYTDIERGA
                     VMHISPAGEVSRFSLDSAIVRLGRLAIGPDGSVWVADITGGGITSLKDGTFTPHEIGS
                     GGGGPYGVAVASDGVVWATLQGDGKLVRIDPGGTPVTIDLPRPGAVPTDIAVGSDGSV
                     WFLQFRANRIGRWRDGKFSEFEVAKENAGLSGLAVAGDGAIWFGMVRSSSLGRLRDGK
                     VETFRLPRDNTRPYSLAADPDGNIWYADISGYVGMLPAQYARRP"
     gene            complement(4247..5269)
                     /locus_tag="VNY79_07335"
     CDS             complement(4247..5269)
                     /locus_tag="VNY79_07335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72295.1"
                     /translation="MFLNVPLIVAVDPRNPSHLLAGTDLGLIVSNNGGLTWAPEARDL
                     IFGAAFAVIFLDGGERAICAAQSGVYRFEDGRWTAARAPDAAIPARMLAVGASADQVY
                     LLGRNRLFASRDGARTFSEVRRTSDAGEMTALAVVRSEPPSIMAVVDGRVMASEDGGL
                     QWRPSSPGGQTGPADIVAADPQVPRRVWAAGAGRVYISDDLGASWRAAGRALPEPATK
                     VRGIAANAEAKILVVSTNRGVYRTEDGGETWVLKEDNLPIHLEAGPLARDPADTNVLY
                     AVYSLMPYSEAWRIAVGTGNLSRPFDSIYIAGAMGLFLVVLIGGGVFALRLVRARAAA
                     KPQPSC"
BASE COUNT          947 a         1873 c         1777 g          918 t
ORIGIN      
        1 tcccactcga cggtcgcggc attttttcga acagcataac gatctatttt cgcgccgacc
       61 tgcggcgcca gctcggcggc aaaccgatca gcatcgtcta catcaacaat ccgatgttcg
      121 gcgggttctt tcgcctgcag aaggattgcc agtctggctt catggtggtg aacaccgtcg
      181 gcgatccgaa ggttgatccg gttaaggccg ccaatgccgc tgccgacacc agcgaggagc
      241 ggttgatcga gttggtgcgc gccggcgccg gcgtgcccga cctcgacgtc aagatcgatg
      301 gcgtggcgcg ctggcgcgca acctccgacg tggcgcgcga gttccagcgc gggcgcgtct
      361 tcatcgtcgg cgacgccgca cacctcatgc ctcccaacgg cggtttcggc ggcaacaccg
      421 gtatccatga tgcccacaac ctcgcttgga agctggcgat ggtgctcaaa ggcgttgccg
      481 gcccagcgct gctcgacagc tacgaggccg agcgcaaacc ggtggcgaag tttaccgtcg
      541 agcaggctta cacgcgctac gtgacgcgca ccgccaccta tctcggcgcc accgactacg
      601 aaccgctggc gcacgatttc aacgtcgaac tcggttacat ctatcattcg ccggcgatct
      661 cgcccgacaa cggcgatggc aagggacacg acgatccacg gctcacattg gggcggccgg
      721 gggcgcgtgc gccgcatctc ttcctggaac gggacgggaa acgaatatcg accctcgacc
      781 tgttcggccg caaacttcgt ccttctggcc gggcccgagg gcgcagcctg gtgcgaagcc
      841 ggccgcatcg aagcagcccg cttgagcgat gtgcaactgg acgtccatcg cgtcggccgc
      901 acggatttgg ccgatcccga gaatcggttt tgcagcgcgt acgggctgcc tccgaccggc
      961 gcctgcctgg ttcggcccga cggttttgtc ggctggcgag caaaagcgag cgagcctgat
     1021 ccgtcggcaa gcctggcgac ggcgctccgg acgctcttgt gccggtcgta gactatctct
     1081 gcaaaattcg ctgcagtagc tccatcagcg cgcccggcgc ggtgacgttc ggactgtggc
     1141 tggcgtccag ctcgtagcat cgccaacctg cggtgtgtct cgcgtgatcg gcaaattgct
     1201 tgaacggagt cttgtcggcg tagcgtgtac agtgaatgta cgaacgcggc accgcgggct
     1261 ccgcttggag gcgaatcggc tgctcgaaac agcggaccga ttgcggcatg cggaattgcg
     1321 acacccacgc aatatcctcc gcggccgtgt cgggcggaat tggattgggc gtcactcgcc
     1381 agccgtcgcc ggtcttgacg ctgccgagca gacgttgccg ttcctcggcg cccaagaagt
     1441 cgatcaaggc ctgaccgttc gccggcacga aggcgtcgag atagataagc ccggcaacgc
     1501 gatcgcgcgc ctgatcggcg acacccgtca ccgccatgcc gccatagctg tgcccgatca
     1561 gcacgacatc gcgcagatct tcatacttga tgacgccaag cacgtcttga atatgggttt
     1621 ccaggtcgtt cgcgggaccg gccagatgag cccgttcgcc cagcccggtg tagctcggtg
     1681 cgaagaattc atgtccggcc gccgccatga gcggccgcat cttcttccag gcccacgccg
     1741 acgaccaggc gccgtgggcg agcacgatag tcgccaaatg ttcctcctct tgttttccaa
     1801 cgcgccgtct ccatcctatc atgctcggtg acgagatctg tttgccgtcg gttgccgacg
     1861 cggcagtgag acgcggctgg agaccgaaca ccaaggtttg cgaggctgcc cggatgcgat
     1921 ttcaatcgcc ggtcgcaaga acgcccccgg tgacacccga tggacggatc accgagctgc
     1981 atctctgggc ggtgcgcgag gggctgcgcc gggctccggc cgcggccgtg ttcgaggatt
     2041 tctgccggcg gctcgccgct gcaggggtgc cgctctggcg cgctttcgtc gggatgcgaa
     2101 cgctgcatcc gcaatgggca ggctacacct acacctggtg gcgcgaccgc gacgtcgttg
     2161 acccgtcacc gcgagagcac ggcgaagcct atgatcagga cctgcgggaa agcccctata
     2221 cctatctgcg ggataccgcc ctcggcggag gcgtgccgca gcgtctgcgg cgtcggttgg
     2281 ccggcagcgg ggcgcgacac gactttgccg tgctcgagca gttggcgatt gccggaggaa
     2341 ccgactatct cgccgaactg atccccgttg gcatggcgac ggaggcgttc cccgacagcg
     2401 gcctaggctt ctccttcgcg accgatcgcc ccgagggttt cagcgacgac gacctccact
     2461 tgatcgaagc ggtattgccc gcggtgtcgc tggcgatcgt atcggatgcg gagcatacga
     2521 tggccgccgg cctgctcgcc gcctatctcg gcagcgatgc aggccgccgt gttcatgccg
     2581 gtgtggtcga gcgcggttcg gttgagagca ttcgcgccgt cctctggtac gccgacatcc
     2641 gcggtttcac gccaatcgcc gacgcaacgc cggggcccgt tctcgttgaa atgctcgacg
     2701 acatattcga aacgttggcg gccccgctgc gtcgacatcg cggtgaggtg ctcaagttcc
     2761 tgggcgacgg catgctcgcg agcttcgcct tcgtcgatgc gacgcgcgat gaaacctgcg
     2821 gccacgcgct caacgccgcc accgaggcga tgcacgacct cgaccggctc aacgccgatc
     2881 gggcgcggat agggaagccg gttgccgtcg tcgatctcgc gctccacctc ggcgaggtgc
     2941 tgtacggcaa tgtcggcgcc gtcgaccgcc tcgacttcac ggtcatcggt cccgcggtga
     3001 acgaggtggc gcggatcgag aagctgtgcg agccgctcgg ccgcagggtt ctggtctccg
     3061 ccgaattggc tgcggcgacg cgcgacagcg cccggcttga gccgctcggc gcccatctcc
     3121 tccgcggcgt acgcgagccg aaagagattt tcgcgctgcg gctttgaatg ttgcatcgcc
     3181 gctcgcgtcc gcggacttgg catggtcagg acgcgtgcgc tcgccggatc ggccgccgcg
     3241 tgcggctacg gacggcgggc atattgtgcc ggcagcatgc cgacatagcc gctgatgtcg
     3301 gcataccaga tattgccgtc gggatcggct gcgaggctgt aagggcgggt gttgtcacgc
     3361 ggaagccgga aggtttcgac cttgccgtcg cgcaagcggc cgaggctcga actgcgcacc
     3421 attccgaacc agatcgctcc gtccccggcg accgccagcc cgctgagacc ggcattctcc
     3481 ttggccacct cgaactcgga aaactttccg tcccgccatc ggccaatgcg attggcgcgg
     3541 aattggagaa accacaccga accgtcggag ccgaccgcaa tgtcggtcgg aacggcgcca
     3601 ggcctcggca aatcgatcgt gaccggcgtg ccgccaggat cgatgcggac cagtttgccg
     3661 tcgccctgca gcgtcgccca tacaacgcca tctgacgcca ccgccacacc gtagggtcct
     3721 ccgccacctg acccgatctc gtgcggcgtg aaggtcccgt ctttgagact ggtgatgccc
     3781 cctccggtga tgtcggcaac ccagaccgag ccgtcagggc caattgccag ccggcccagc
     3841 cgcacgatcg cgctgtcgag cgaaaaccgc gagacttcgc ccgcggggct gatgtgcatg
     3901 acggccccgc gctcgatgtc ggtataccag gcgctgccgt cgccggcgac cgccaagccc
     3961 agcggttcga aattgcgccc gggcgtccgc agcaggtcga tgcggccgcc gcgcacacgc
     4021 ccgatgcttt cggcttggtc gatagtgaac cagatcgtgc cgtccgcggc tgctgcgatc
     4081 gccataggcg catcgcgcga gtccgacatg gcgtactcga cgacccgcgt cgcaggcgtt
     4141 ccgccccgca tcagcagcgc accggctaca atcagcacga cgattgccag cgccgcagca
     4201 atcgccaacg gacgccgcca cgccgacggt tgtttcgcag ttacctctaa catgacggtt
     4261 ggggcttggc ggcggcgcgc gcgcgtacca ggcgaagcgc gaacacgccg ccgccgatca
     4321 ggacgaccag gaaaaggccc atggccccgg caatatagat cgaatcgaac ggcctcgaca
     4381 gattgccggt cccgacggcg atgcgccacg cttccgaata gggcatcagt gagtacacgg
     4441 catagagcac gttggtgtcg gccggatcac gcgccagcgg ccccgcctcg agatggatcg
     4501 gaaggttgtc ctccttgaga acccaggtct cgccgccgtc ttcggtgcga tagacaccgc
     4561 ggttcgtgct gacgacgagg atcttcgcct cggcattcgc ggcaatgccg cgcaccttgg
     4621 tcgccggctc gggcaaggcg cgcccggcgg cgcgccacga cgcacccaga tcgtcgctga
     4681 tgtacacgcg gccggcgccc gccgcccaca ctctccgcgg gacttgagga tcggcggcga
     4741 caatgtcggc cggtccggtc tgaccacccg gcgagctcgg gcgccactgg agacctccat
     4801 cctcgctggc catgacccgg ccgtcgacca ccgccatgat gctcgggggc tctgagcgga
     4861 cgacggcgag cgccgtcatc tcccccgcgt cggacgttct gcgcacctcc gaaaaggtcc
     4921 gcgcgccgtc gcggctcgca aacagccgat ttcggccaag cagatagacc tgatcggccg
     4981 aggctccgac cgcaagcatc ctggcgggaa ttgcggcatc cggcgcgcgc gccgctgtcc
     5041 agcgcccatc ttcgaagcgg tacacgccgc tttgcgccgc gcagatcgcg cgctcaccgc
     5101 cgtcgaggaa aatgaccgcg aacgccgcgc cgaaaatgag atcgcgcgct tcgggagccc
     5161 aagtcagccc gccgttgttc gacacaatca ggccgagatc ggtgccggcc aggagatgtg
     5221 atgggttgcg cggatcaacc gcgacgatca gcgggacatt gaggaacaag ccgacatcgg
     5281 cccgcagcca cgtcccaccg aaattgcgtg agcgaaacac gccgccatat gaactcgcgt
     5341 cgtgtggcca agcgctgccc gcggcgaatg caagcagcag gagcacgaga acaagccgac
     5401 agacggcccg catcacgcat gctgctgcga ggggcaaggg cccctcgcag cttgttcaaa
     5461 agcagacgcg caacggctca aggcttgcgc gacttctcgc cgggcgccaa cgcga
//
LOCUS       DATMQB010000241         7991 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4109002, whole genome shotgun sequence.
ACCESSION   DATMQB010000241 DATMQB010000000
VERSION     DATMQB010000241.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7991)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7991)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7991
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4109002"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..784
                     /locus_tag="VNY79_07340"
     CDS             <1..784
                     /locus_tag="VNY79_07340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HWX72296.1"
                     /translation="AGSLMPKLDALSVLRCVQVVRRLLLKNRDIGLFCNLSGATLTDA
                     EFPQLLEFLDANRAIASALVFEFTQSAVRAMGPLEHESLAALAERGFRFSMDNLTDLR
                     VDPRELNERGFRFIKVSAMLLLNRVGAASTDIHPADFSDLLGRFGIDLIAERIESEST
                     VVDLLDYDVRFGQGFLFSPPRPVRAEALQEAGGEATKAAPAPPTVAKPEAINGAPAAP
                     APAEQAASAPPQPPQPAPASDAPFAAVSGALAQFARAGNGRG"
     gene            808..1668
                     /locus_tag="VNY79_07345"
     CDS             808..1668
                     /locus_tag="VNY79_07345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01459 family HAD-type hydrolase"
                     /protein_id="HWX72297.1"
                     /translation="MPGVIERFEPLASAYDVLLCDVWGVVHNGVAAFAEAGDALARFR
                     ARGGTVILITNAPRPGAAVRKILDGLGVRRDAYDAITSSGDVTRGIVEAKRAERVFHL
                     GPLRDRPIFAGLDVTFAPLETADYVVCSGLFDDTVETPESYREMLALMRERSLFMVCA
                     NPDVVVERGDTLVYCAGALADAYVALGGETLYCGKPHAPIYEAALGQAAALRGGKVPP
                     LARVLAIGDSVRTDLAGAASFGVDCLFVISGLHAEQLGSRETPDPAGLGAMFAAAGTV
                     PKAVIPRLVW"
     gene            complement(1766..2165)
                     /locus_tag="VNY79_07350"
                     /pseudo
     CDS             complement(1766..2165)
                     /locus_tag="VNY79_07350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596883.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
     gene            2411..3373
                     /locus_tag="VNY79_07355"
     CDS             2411..3373
                     /locus_tag="VNY79_07355"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003919 - FMN adenylyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HWX72298.1"
                     /translation="MPPKRFRVVRDAASDDALRGAVLALGNFDGVHRGHRAVIAAARA
                     RAAKLGTPAGVLTFEPHPRTFFHPQESLFRLTDESAKLRLLATTGLDGAIVLTFDAAL
                     AGFTAEEFVSRILLERFAMRGAVIGFNFHFGKGRAGTPAFLTAEGERHGFSVDIVPPL
                     ADGGRIISSGPIREALMAGRVAEAAELLGYAWFVSGSVAHGDKRGRELGFPTANIKLD
                     PSCALRHGVYAVRAQVEGRRYDGVANFGRRPMFDDGSVLLEVFLFDFSGDLYGRSIDV
                     ALMGWIREEKVFASVAALVSRMNEDAGEARSMLARAAETVFPEP"
     gene            complement(3399..4388)
                     /locus_tag="VNY79_07360"
     CDS             complement(3399..4388)
                     /locus_tag="VNY79_07360"
                     /inference="COORDINATES: protein motif:HMM:NF013740.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:1905887 - autoinducer AI-2 transmembrane
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HWX72299.1"
                     /translation="MIGIFLLLFVAFLYFGRAILLPILAAAIVALTLGPVVKAANRRG
                     ISPWITALLIVLLCLGALSIAATALAGPVSEWIGRAPEIGATIRQKLSVLEGPLASLL
                     QLEEMLFGPGAPAAAPSAPSVVLPVVAFVTPAAGELLLFFGTLMFFLVGQIELRAQLV
                     SFFATRDAKLRFLKIVTDVERNLASYLAIVTAINASLGVVVALGAFALGFPNPAIFGV
                     LAALLNYVPYVGPAVMVVILFVVGLVSFPSLGQAFIAPLAFVLLTTMEGHFITPTVVG
                     RRVTLNPLLIFLALAFWTWMWGPIGAFLAAPLSIIGLVVVNHLVPSEDVKLPE"
     gene            4628..7636
                     /gene="ileS"
                     /locus_tag="VNY79_07365"
     CDS             4628..7636
                     /gene="ileS"
                     /locus_tag="VNY79_07365"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004822 - isoleucine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006428 - isoleucyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HWX72300.1"
                     /translation="MNDTPAKTRDYSETLFLPRTDFPMRAGLPQKEPELLARWRSLDL
                     YGRLRTAAKGRPRFILHDGPPYANGNVHIGTALNKILKDVVTKSQQMLGFDSNYVPGW
                     DCHGLPIEWKIEEEYRAKGRDKDKVPIVEFRRECRQFADHWIGVQRAEFERLGVVGDW
                     EHYYSTMSCAAEAQIARELMKFAANGSLYRGSKPVMWSVVEKTALAEAEVEYEDFVSD
                     QVWVKFPIVVAVAEPTSDGRQVAGASILIWTTTPWTIPGNRAISFSPKVDYGLYEVVD
                     APSDNWAKPGDRFVLADKLAVEIFRQARVTAFKKLKSIPASDLAGLVGEHPLKNFNKG
                     YNFKVPLLPGEHVTEDTGTGFVHTAPGHGREDFDVWTANARALAGRGINTAIPYTVDA
                     DGRFTEQAPGFTGKRVLTEKGEKGDANDAVIKALIEAGTLIARGRLTHQYPHSWRSKK
                     PVIFRNTPQWFIAMDEPFALAPFPERGGGKEATLRGRALAAIKATRWVPEQGENRITG
                     MIESRPDWVISRQRAWGVPITLFIKEEPEGSVEVLNDPHVNARILDAFEEEGADAWYR
                     PGARERFLGPLAKDGWQKVDDILDVWFDSGSTHAFVLEDPKHFPALAAIKRRADGGPE
                     VVMYLEGSDQHRGWFQSSLLESCGTRGRAPFDIVVTHGFTLDEHGYKMSKSLGNTIAP
                     QDVIKQSGADILRLWVCATDYWDDQRIGPEILKTNIETYRKLRNTLRWMLGNLAHFHA
                     ADHVRYEAMPELERLMLHRLAELDALVRGAYADFDFKRIFAALNAFMISDLSAFYFDI
                     RKDALYCDPYSSVTRKACLTVLDQLFRSTVIWLAPMLSFTAEEAWLARDPSAASVHLE
                     LLPAVPEAWRDDALAEKWRKVRQVRRVVTGALEIERAQKRIGSSLEALPIVHVSDPDL
                     FAAVVDVDLAEACITSGAVLAEGDGPPTAFRLPDVPGVAVVPEGAQGRKCARSWKILP
                     SVGDDRQFPDVTPRDAQALREWEAMRKAAE"
     gene            7650..>7991
                     /locus_tag="VNY79_07370"
     CDS             7650..>7991
                     /locus_tag="VNY79_07370"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HWX72301.1"
                     /translation="MADAVQESADRAYAWGPLTALGLAIAAATGVVDQAVKLWLVNVF
                     ELGSRDQVALMPWVDLVLTWNTGISYGLFPQEGAFGQWALLAFKAVVVAFLWVWLART
                     RSRLAAAALGLI"
BASE COUNT         1345 a         2654 c         2630 g         1362 t
ORIGIN      
        1 agcgggctcg ctgatgccga agctcgacgc gctttcggtg ctgcgctgtg tgcaggtggt
       61 gcgccggctg ctgctcaaga accgcgacat cggcttgttc tgcaatctct ccggcgcgac
      121 cctgactgat gccgagttcc cacaattgct cgagttcctt gacgccaatc gcgccatcgc
      181 ctcggcgctg gtgttcgagt tcacgcagag cgccgttcgc gccatgggac cgctcgagca
      241 cgaaagcctc gccgcgctcg ccgagcgggg ctttcgtttc tcgatggaca acctcaccga
      301 cctgcgcgtc gacccgcgcg aattgaacga gcgcggcttc cgcttcatca aggtgtcggc
      361 gatgctgctg ctcaaccgcg tgggcgccgc ttcgacggac atccatcccg cggatttctc
      421 cgatctcctc gggcgtttcg gcatcgacct catcgccgag cggatcgaga gcgaatcgac
      481 cgtcgtcgac ctgctcgatt acgacgtacg cttcggccag ggcttcctgt tctcgccgcc
      541 ccgcccggta cgcgccgaag cgctgcagga ggcaggaggc gaggccacga aagccgcccc
      601 cgccccgccg accgtcgcta agcccgaggc catcaacggc gctccggcgg ctcccgctcc
      661 tgccgagcag gccgcgtcag ccccgccgca accgccgcag cccgcgcctg cgagcgacgc
      721 gcccttcgcg gcggtaagcg gcgcgctcgc ccaatttgcc cgcgccggca acggccgcgg
      781 ctgatgccgc aatgatggcg cgcgaccttg cctggcgtca tcgaacgatt tgagccgctc
      841 gcgagcgcgt acgacgtttt gctctgcgat gtctggggcg tggtgcacaa cggggttgcc
      901 gccttcgccg aggccggcga tgccctcgcc cggtttcgcg cccgcggcgg cacggtcatt
      961 ctcatcacca atgcgccgcg gccgggcgcc gccgtgcgga aaattctcga cggcctcggc
     1021 gttcggcgcg acgcctatga cgcaatcacc agctccggcg acgtgacccg cggcatcgtt
     1081 gaagcaaaac gtgccgagcg cgtgttccat ctcggcccgc tgcgcgaccg accgatcttt
     1141 gccggccttg acgtcacctt tgcgccgctt gagaccgccg attacgtggt gtgctccggc
     1201 ctgttcgacg acaccgtcga gacgcccgag agctaccgcg agatgctggc gttaatgcgc
     1261 gagcgttcgc tgttcatggt ctgcgccaat cccgacgtcg tcgtcgagcg cggcgatacc
     1321 ctggtctact gcgccggggc gctggccgac gcttatgtcg cgctcggcgg cgagacgctc
     1381 tattgcggca agccgcacgc gccgatttat gaggcggcgc tcggccaagc ggccgcgttg
     1441 cgcggcggca aggtgccgcc gctcgcgcgc gtgctcgcga tcggcgattc ggtccgcacc
     1501 gaccttgccg gcgcggcttc cttcggcgtg gattgcctgt tcgtcatttc cggccttcac
     1561 gccgagcagc tcggttcgcg cgaaaccccg gaccctgccg gcttgggcgc gatgttcgcc
     1621 gccgccggca ctgtccccaa ggcggtcatc ccgcggctgg tgtggtgacc tgcgtggtca
     1681 accttcgccg atcttggcgc agcgagcagc aaccggccag gcgcaaacgg ctcgaacgga
     1741 aagtgctttc agttcgtgat taggcctatg ccgccggcgc cgactccgcc gcctcagcga
     1801 acaccgcctc gatcttggtt ctgagcgtct gcgcgttgaa cggcttgacg atgtagttgt
     1861 tcacgcccgc cttcctcgcg gcgatgacgt tgtccgtttt ggattcggcg gtcaccatga
     1921 cgaacggtgt ttcgccaagc gcgggatcgg cgcgaacctg gagcagcagc tcgtagccgc
     1981 tcatcggctc catgttccag tccgagatca ccaatccgta acgcttggca cgcatcttgg
     2041 cgagcgccgc ggcgccgtca ttggcatcat ccacgtcgga gaagccgacc tgccgcagca
     2101 gattgcggat gatgcggacc atggtcgtcg accacgagca ccggcattga cggatcaaga
     2161 gccatggctc tgctccctgg cgcggtccgt tgcccgaggc cggccttccg acgattcatc
     2221 agaccgcggt cgagcgccct cggcgagcct cctggacgct cggcgacgct agcattgcgt
     2281 gattgaatgg ccggttaatc ggcagcaggc ggttcccggc cgagtgcaaa agcgctttcg
     2341 gcgcggatgc ttgactcggc ccacccaggg cggcacctac gcgcagcggt tccttaacca
     2401 ttgaaacccg atgccgccga aacgctttcg cgtcgtgcgc gatgccgcgt ccgatgatgc
     2461 gctccgtggc gcggtcctcg cgctgggcaa tttcgacggg gtgcatcgcg gccatcgggc
     2521 ggtcatcgcc gcggcgcgcg cccgcgcggc aaagctcgga acaccggccg gcgtcctcac
     2581 cttcgaaccg catccgcgca ccttcttcca tccgcaggag tcattgttcc gccttaccga
     2641 cgagagtgcc aagctccgcc ttctcgccac gaccgggctc gacggcgcca tcgtgctcac
     2701 cttcgatgca gcgctggcgg gcttcaccgc cgaggagttt gtttcccgca tattgctcga
     2761 gcggtttgca atgcgcgggg cggtgatcgg ctttaacttt catttcggca aggggcgcgc
     2821 gggcacgccg gcgtttctca ccgcggaggg cgagcggcac ggattcagcg tcgatatcgt
     2881 gccgccgctc gccgacggcg gccgcatcat ttcctcgggg ccgatccgtg aggcgctgat
     2941 ggcggggcgc gtcgctgagg ccgccgagct gctcggctac gcgtggttcg tctccggcag
     3001 cgtcgcccat ggcgacaagc gcggacgcga actcggcttc ccgacggcca acatcaagct
     3061 cgacccctcc tgcgcgctgc ggcacggcgt ctatgcggtg cgcgcccagg tcgaaggacg
     3121 ccgctacgac ggcgtggcga acttcggacg ccgcccgatg ttcgacgatg gcagcgtgct
     3181 gctcgaagtc tttttatttg atttttccgg cgatctttac gggcgttcga tcgacgtggc
     3241 cttgatgggc tggatccgcg aggaaaaggt gttcgcttca gtcgccgctc tggtcagcag
     3301 aatgaatgag gatgcgggcg aggcgcggag catgctggcg cgggccgcgg agacggtgtt
     3361 ccccgagccg tgatccggcg gacctgcgga aacgccgttc attccggaag cttgacgtcc
     3421 tcgctcggca ccaggtggtt gacgacgacg aggccgatga tcgacagcgg ggccgcaagg
     3481 aacgcgccga tcggtcccca catccaggtc cagaacgcga gcgccaggaa gatgagcagc
     3541 gggttgagcg tgacgcgccg gccgacgaca gtgggcgtaa tgaaatgacc ttccatcgtg
     3601 gtgaggagga caaaggcaag cggcgcgatg aacgcctggc cgagcgatgg aaagctgacc
     3661 agtccgacga cgaacaagat caccaccatc accgccggcc cgacgtaggg cacatagttc
     3721 aacagcgcgg cgagcacgcc gaagatcgcc ggatttggga aaccaagcgc gaaggccccg
     3781 agcgcgacga cgacgccgag cgaggcgttg atggccgtca cgatcgcgag atagctggcc
     3841 agatttcttt cgacgtcggt cacgatcttg aggaagcgca gcttggcgtc gcgggtggcg
     3901 aagaaggaga cgagctgcgc gcgcaactcg atctggccga caagaaagaa catcagcgtg
     3961 ccgaagaaca gcagcagctc gccggctgcg ggcgtgacga atgcgaccac cggcagcacc
     4021 acgctcgggg cggatggcgc ggccgctggc gcgcccgggc cgaacagcat ttcttccaac
     4081 tggagcagtg acgccagcgg cccctcgagc acggaaagct tctgcctgat ggtggcaccg
     4141 atctccggtg cgcgtccgat ccactcgctc accggtccgg ccaaggcggt agcggcgatg
     4201 cttagcgccc ccaggcagag gaggacaatg agcagggcgg tgatccacgg tgaaataccg
     4261 cggcggttag cggccttgac caccgggccg agcgtcaggg ccacgatggc ggcggccaag
     4321 atcggcagca ggatggcgcg gccgaaatag aggaacgcga cgaacagcag caggaaaatc
     4381 ccgatcatcg cggctcggcc tgccgaggac cataggtcgc cgacgctgct gaccggctgc
     4441 gggtcgttta tgacgacgac gcggcgcgct tcagggttcg tacgaatata ttccacttaa
     4501 ggcttcctca ccggcgcaaa tatccttgat cgtcaacgcg aaatccaggc cgcgggttcc
     4561 cggcggccgc agtgcgcccg cggcgacagc cctttgcgcc gcgccagcgg cttgttagaa
     4621 ggcgcccatg aacgacacgc cggcaaaaac acgcgattac agcgaaacgc tgttcctgcc
     4681 cagaaccgat ttcccgatgc gcgccggcct gccgcagaag gagccggagc tgttggcgcg
     4741 ctggcgcagc ctcgacctct acggccgcct gcgcacggcg gccaagggcc gcccgcgctt
     4801 catccttcac gacggcccgc cctacgccaa cggcaacgtc catatcggca cagcgcttaa
     4861 caagattctc aaggacgtgg tgaccaagag ccagcagatg cttggtttcg actcgaacta
     4921 cgtgcccggc tgggactgtc acggcctgcc gatcgaatgg aagatcgagg aggaatatcg
     4981 cgccaagggc cgcgacaagg acaaggtgcc gatcgtcgaa ttccgccgcg agtgccggca
     5041 gttcgccgac cattggatcg gcgtccagcg cgccgagttc gagcgcctcg gcgtggtcgg
     5101 cgattgggag cactactaca gcaccatgag ctgcgcggcc gaggcgcaga tcgcgcgcga
     5161 gctgatgaag tttgcggcga acggcagcct ctatcgcggc tcgaagccgg tgatgtggtc
     5221 ggtggtggaa aagaccgcgc tcgccgaggc ggaggtcgaa tacgaggatt tcgtatcgga
     5281 tcaggtgtgg gtgaagtttc ccatcgtcgt cgcggtggca gaaccgacaa gcgacggtcg
     5341 ccaggtcgcg ggcgcgtcga tactgatctg gacgaccacg ccctggacca ttcctggcaa
     5401 tcgcgcgatc agcttctcac cgaaggtcga ctacggcctc tacgaggtcg tcgacgcccc
     5461 gagcgacaat tgggcgaagc cgggcgaccg cttcgtgttg gcggacaaac tcgcggtcga
     5521 gatattccgt caagcccgcg tgaccgcttt caagaagctc aaaagcattc cggcgagcga
     5581 tctggccgga ctggtgggcg agcatccgct taagaatttc aacaagggct acaatttcaa
     5641 agtgccgctc cttcccggcg agcacgtcac cgaagatacg ggcacgggat tcgtccacac
     5701 tgcgcccggg cacggacgcg aagacttcga cgtctggacc gcgaatgctc gcgcgctcgc
     5761 cgggcgcggc atcaacaccg ccatccccta cacggtcgac gccgacggcc gcttcaccga
     5821 gcaggcgccc ggcttcaccg gcaagcgcgt gcttaccgaa aagggcgaga agggtgacgc
     5881 caacgacgcg gtgatcaaag cgctcatcga ggccggcacg ctgatcgcgc gcgggcggct
     5941 cacgcaccaa tatccgcatt cgtggcgctc gaagaagccc gtgatcttcc gcaacacgcc
     6001 gcaatggttc attgcgatgg acgagccatt cgcattggcg ccgtttcctg aaaggggagg
     6061 gggcaaagag gcgaccctgc gcggccgcgc gcttgccgcg atcaaggcga cgcgctgggt
     6121 accggagcag ggcgagaacc gcatcaccgg tatgatcgaa tcgcggcccg actgggtgat
     6181 ctcccgccag cgcgcctggg gcgtgccgat cacgctgttc atcaaggagg agccggaagg
     6241 atcggtcgag gtgctcaacg atccgcacgt gaacgctcgc atcctcgacg cgttcgagga
     6301 ggagggtgcg gacgcctggt accgaccggg cgcgcgcgaa cgctttctcg gcccgctcgc
     6361 caaggacggc tggcagaagg tcgacgatat tctcgacgtg tggttcgatt ccggctcgac
     6421 gcacgccttc gtgctcgaag accccaagca ctttcccgcg ctcgccgcca tcaagcgcag
     6481 ggccgacggc ggccccgagg tcgtgatgta cctcgaaggc tccgaccagc accgtggctg
     6541 gtttcaatcc tcattgctcg aatcctgcgg cacgcgcggc cgcgctccct tcgacatcgt
     6601 cgtgacccac ggcttcactc tcgacgagca cggctacaaa atgtcgaagt cgctcggcaa
     6661 caccatcgcg ccgcaggacg tgatcaagca atcgggcgcc gatattctgc ggctgtgggt
     6721 gtgcgccacc gattattggg atgaccagcg tatcgggccg gaaatcctca agaccaatat
     6781 cgagacctac cgcaagctgc gtaacacgtt gcgctggatg ctcggcaacc tcgcgcattt
     6841 ccatgccgcg gaccacgtcc gctacgaggc gatgccggaa ctcgagcggc tgatgctgca
     6901 ccgcctcgcc gagctcgatg cgctcgtccg cggcgcctac gccgatttcg acttcaagcg
     6961 catcttcgcc gcgctcaacg ccttcatgat cagcgacctc tcggcgttct atttcgatat
     7021 ccgcaaagac gctctctatt gcgatccata ctcgtcggtg acccgcaagg cctgcctcac
     7081 cgtgctcgac cagctgttcc gctcgaccgt gatctggctc gcgccgatgc tctctttcac
     7141 cgccgaggag gcttggctgg cacgcgaccc gtcggccgct tcggtccatc tcgaacttct
     7201 ccccgccgtg ccggaggcct ggcgcgacga cgcgctggcg gagaagtggc gcaaggttcg
     7261 tcaggtccgg cgcgtggtga cgggcgcgct tgaaatcgag cgggcgcaga agcgcatcgg
     7321 ctcctcgctc gaggcgctgc caatcgtgca tgtgtccgat ccggacctgt tcgcagccgt
     7381 ggtcgatgtc gatctcgccg aagcgtgcat cacttcgggc gccgttctgg ccgaaggcga
     7441 cgggccgccg acggcgttcc gcctccccga cgtgcccggc gtcgccgtcg ttcccgaagg
     7501 ggcgcaaggg cgcaaatgcg cccgctcctg gaaaatcctg ccgtccgtcg gcgacgatcg
     7561 gcagtttccc gacgtgacgc cgcgggatgc gcaggctttg cgggaatggg aagcgatgcg
     7621 caaggcagcg gaataggctg ggggccggcg tggcggatgc ggtgcaggaa agcgcggatc
     7681 gggcctacgc ttggggaccg ttgaccgcgc tcgggcttgc gattgccgcg gcgaccggcg
     7741 tcgtcgatca ggcggtgaag ctttggctcg tgaatgtgtt cgagctcggc agccgcgacc
     7801 aggtggcgtt gatgccgtgg gtcgatctcg ttctcacctg gaacacaggg atcagctacg
     7861 gcctgtttcc gcaggagggc gcgttcggcc aatgggcgct gctcgcattc aaggccgtgg
     7921 tcgtggcgtt cctgtgggtc tggctcgcac ggacgcggtc gcggctcgcc gccgccgccc
     7981 ttgggctgat c
//
LOCUS       DATMQB010000242         4085 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3497989, whole genome shotgun sequence.
ACCESSION   DATMQB010000242 DATMQB010000000
VERSION     DATMQB010000242.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4085)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4085)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4085
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3497989"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..417)
                     /locus_tag="VNY79_07375"
     CDS             complement(<1..417)
                     /locus_tag="VNY79_07375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pirin family protein"
                     /protein_id="HWX72302.1"
                     /translation="MSWLPDKDPVLGDKASCDALELIVVPRVRDLGDGFSVRRALPHA
                     KRQMVGPFIFFDQMGPVQLVAGQGMDVRPHPHIGLATVTYLFDGRVMHRDSEGNALEI
                     TPGAMNLMTAGRGIAHSERTPANVRASGGGMFGIQSW"
     gene            578..1873
                     /locus_tag="VNY79_07380"
     CDS             578..1873
                     /locus_tag="VNY79_07380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4010 domain-containing protein"
                     /protein_id="HWX72303.1"
                     /translation="MITVPSVTSVALLVALSLFLGLAFEDFFARTDTRRPGGIRTFPM
                     LALAGGVLYLFDPVHFVPFTAGLLVLGAWLAIFYRRHIGDPDETGEPNVGLVVPLLNV
                     HAYLLGAVTLALPHWIAVGTTVAVVLLLTGREKLHALARQLDVREIAIAGEFLILSGI
                     ILPLLPNEPVTTLTTITPHQAWLALVVVSALSYVSYLVQRYWKAAASGLWMAALGGLY
                     SSTATTVVLARQAKAGSVTKRQAQAGITLATAIMYLRILVIVAVFNGPLARTLVIPLC
                     GLALAGLLICALQYRFAGPVPADADAPASALPASGANPLQLGPAALFAGLFVLVSLVS
                     KWITTQFGISGVYSLAAVVGITDIDPFVLNLAQGGASGMPNGVLAAAILIAASSNNIL
                     KAVYAAGFAGGRKTAGSAAALVLLAIAGVGIAFATGGFR"
     gene            complement(1967..2338)
                     /locus_tag="VNY79_07385"
     CDS             complement(1967..2338)
                     /locus_tag="VNY79_07385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="twin-arginine translocation pathway signal"
                     /protein_id="HWX72304.1"
                     /translation="MAVPSRFFLRRSASSLVVIAAALAGCALNEGPGQLAVDPGRYEF
                     YHCGDLATRLTVLQARETELRTLMAKAGEGGSGALVGALAYRADYEAVLSEEKLLQRT
                     AAEKKCAVGPPPAFQSGQTVR"
     gene            2732..3520
                     /locus_tag="VNY79_07390"
     CDS             2732..3520
                     /locus_tag="VNY79_07390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase"
                     /protein_id="HWX72305.1"
                     /translation="MEFERASLEIDGTVAILSMNHPEVLNAVSAEMLEGMTAALDTLA
                     KASPAIRCLVITGAGRAFSTGANLQGRGNGPLPRGAGYALETQYHPFLRRLRELPYPL
                     VTAVNGPAAGAGMSLALMGDLVLCARSAYFLQAFRRIGLVPDCGSTWLLPRLIGRARA
                     IELSLMGERLPAETALAWGLVNRVFDDAALMGEARRLAHDLAAGPTVALGLIRRLYWE
                     SPENSFEQQLDLECRTQRAAGASEDFKEGVKAFLEKRPANFAGM"
     gene            3828..>4085
                     /locus_tag="VNY79_07395"
     CDS             3828..>4085
                     /locus_tag="VNY79_07395"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016848576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HWX72306.1"
                     /translation="MPKFALIASIEVAPGRRDEFLPLLRAHAARCLKDEPGTLQFDVL
                     LPHDGGDKVMLYELYQDQAAFDAHSNGPSLAQLRKEAAGMMG"
BASE COUNT          595 a         1435 c         1351 g          704 t
ORIGIN      
        1 ccagctctgg atgccgaaca tgccgccgcc gctggcgcgc acattcgccg gggtgcgctc
       61 ggaatgggcg atgccgcggc ccgcggtcat caggttcatg gcgccgggcg tgatctccag
      121 cgcgttgcct tcgctgtcgc ggtgcatgac gcggccgtcg aacagatagg tgacggtggc
      181 gagcccgatg tgcggatgcg ggcgcacgtc catgccctgg ccggccacga gctgcaccgg
      241 gcccatctgg tcgaagaaga tgaacgggcc gaccatctgg cgcttggcgt gcggcagggc
      301 gcggcggacc gaaaaaccgt cgccgaggtc acgcacccgc ggcaccacga tcagttcgag
      361 cgcgtcgcag gacgccttgt cgccgagcac tgggtccttg tcgggtaacc agctcatgat
      421 ctgctccgat gagtggacct cgccgcaaca tggcgcatgg ccgcgcgagg tcgcgtctgg
      481 ccgctatgta tgatacgccg ccgcaacgtg ccatggcgag gttttggtcg cgcccatgat
      541 cacacgctca tgatcacacg ctcatgatca cacgcccatg atcactgtgc cttcggtgac
      601 aagcgtcgcg ctgcttgtgg cgctgagcct gtttctcggc ctggccttcg aggatttctt
      661 cgcccgcacc gacaccaggc gcccgggcgg catccgcacg tttccgatgc tggcgcttgc
      721 cggcggcgtg ctctacctgt tcgatccggt gcatttcgtc ccgttcaccg ccggccttct
      781 ggtgcttggc gcctggctag cgatcttcta ccgccggcat attggtgacc ccgacgagac
      841 cggcgagccg aatgtcgggc tggtcgttcc cctgctcaac gtccacgcct atctcctcgg
      901 cgcggtgacg ctcgccttgc cgcactggat cgcggtcggc accacggtcg ccgtggtcct
      961 gctgctcacc ggccgcgaaa agctgcacgc gctggcgcgg caactcgacg tcagggagat
     1021 cgcgatcgcg ggcgagttcc tgatcctctc cggcatcatc ctgccgctcc ttcccaacga
     1081 gccggtgacg acgctgacga cgatcacgcc ccatcaagcc tggctcgcgc tggtcgtcgt
     1141 ttccgcgctg tcttatgtga gctacctcgt ccagcgctac tggaaggcgg ccgcgagcgg
     1201 cctgtggatg gcggcgctgg gcggcctcta ttcatcgacc gcgaccacgg tcgtgctggc
     1261 gcggcaggcg aaagccggat cggtgacgaa gcggcaggcg caggcgggca ttacgctcgc
     1321 caccgcgatc atgtacctgc gcattctggt gatcgtcgcg gtattcaacg gcccgctcgc
     1381 gcggacactg gtgatcccgc tctgcgggct ggcgctcgcc ggcctcttga tctgcgcgct
     1441 gcagtatcgg tttgccgggc ctgttcccgc ggatgcggac gcgccggcgt cggcgctgcc
     1501 cgcgtccggc gcaaacccgc tgcagcttgg tcctgcggcg ttgtttgctg ggctgttcgt
     1561 tctggtgtcg ctcgtctcga agtggatcac gacgcagttc ggcatctccg gggtctattc
     1621 gctcgccgcc gtggtcggca ttaccgacat cgatcctttc gtcctcaatc tggcgcaagg
     1681 gggagcctcg gggatgccga acggcgtgct ggcggccgcg atcctcatcg ccgcctcctc
     1741 caacaatatt ctcaaggccg tgtatgccgc gggttttgcc ggtggacgga agactgccgg
     1801 aagcgcagcc gcgctcgtcc ttctcgctat tgccggcgtg ggcatcgcct tcgcgaccgg
     1861 gggctttcgg tagcgggaat cgcgagagcc tgacgcggcg cgcgagggta ccggctccga
     1921 cgccgccggc gcgccgtccg ctcggttgac tcaatccatc ttgcggtcag cgaacggtct
     1981 ggccgctctg aaaggcaggc ggcggcccga ccgcgcactt cttctccgcg gccgtgcgct
     2041 gcagcagttt ttcctcgctc agcaccgcct cgtagtccgc gcggtaggca agcgcgccga
     2101 ccagcgcgcc gctgccgccc tcccccgcct tggccatcag cgtgcgcagc tcagtctcgc
     2161 gggcctgcaa gaccgtcaat cgagtcgcca ggtcgccgca gtgataaaac tcgtagcggc
     2221 cgggatcgac ggcgagctgt ccggggccct cgttgagggc gcagccggcg agcgcggcgg
     2281 cgatgacgac caagcttgaa gcggagcggc gcaggaaaaa ccgcgacggt acggccaagg
     2341 cggcgcgctg cacccaatca caatggcggg atagggggac gcggcggctc ggtctcatcg
     2401 caagcatgca ctgtggcagg accagcaccg gatgccctga ggctcctcgc ccgctcggcg
     2461 ccagattcat caacccgttc gcagcttcct gcgccgcaaa taaggcagcg ccgcaacggc
     2521 cggtttccgt gctctgccgc cggcccgacc gatccgacac gccgatgccg tccctgcgca
     2581 ctcgccccga tctttgaggt tgcggccggt atatggtctt tgccgataac gcttcgtaaa
     2641 acgcagagac ggcccgtgtc gcgacgccag ccgcccgatg cggcggaaag ggcacggctt
     2701 cgagcacgag catcgagcaa cggaggggcc catggagttc gaacgcgcga gcctggaaat
     2761 cgacggaacc gtcgccatcc tgagcatgaa ccacccggaa gtcctcaacg cggtgtcggc
     2821 ggaaatgctc gagggcatga ccgctgcgct cgacacgctc gccaaggcga gccccgcgat
     2881 ccgttgtctg gtgatcaccg gcgcgggacg cgcgttctcg accggcgcca acctgcaggg
     2941 acgcggcaac ggtccgctgc cgcgcggcgc cggctacgcg ctggagacgc agtaccatcc
     3001 gttcctgcgc cggctgcgcg agcttcctta tccgctcgtg accgccgtca acgggccggc
     3061 cgccggcgcc ggcatgagcc tcgccctcat gggcgacctc gttctctgcg cgcgctccgc
     3121 gtattttctg caagcgttcc ggcgcatcgg gctcgtcccc gattgcggct cgacctggct
     3181 gctgccgcgg ctgatcggac gcgcgcgcgc catcgagctt tcgctcatgg gcgaacgcct
     3241 tccggcggag acggcgctcg cctggggcct ggtcaaccgg gtcttcgacg acgcggcgct
     3301 catgggcgaa gcgcggcggc tcgcccacga tctcgccgcc ggcccgaccg tcgctctcgg
     3361 cttgatccgc cgcctgtatt gggagagccc ggaaaattcc ttcgagcagc agctcgatct
     3421 cgaatgccgc acgcagcggg cggccggcgc ctccgaagac ttcaaggaag gcgtgaaggc
     3481 ctttctggag aagcgcccgg ccaacttcgc cggcatgtga tcgctcgcct cgcattcgct
     3541 cgcgaatgac ggccgccggc gcgtccgcga ccttgcgcgc caccgcacgc gcgcgccgct
     3601 cgcccggccg gcggcggcat tcctccccgt ccgcgtcccg tcttcgcggc tcctccgatg
     3661 acggcttggc cgctgggcaa cgaagcgcga tgacgcaacc acgggcgaaa tgctaacggt
     3721 ccatgggggc caccgccgcg gccggcgccg atcctgcgcc gcggcggata cggcacacta
     3781 tgatccttcg cgctcccatt agcgggcgca gaaatggaga cgccgctatg ccgaagtttg
     3841 cgctcattgc gtcgattgaa gttgcgcccg ggcgccggga cgagttcctg ccgctgctgc
     3901 gggcgcatgc agcccgctgc ctcaaggatg aaccgggcac ccttcagttc gacgttctgc
     3961 tcccgcacga cggcggcgac aaggtgatgc tctacgaact ctatcaggac caggccgcct
     4021 tcgacgcgca ttcgaacgga ccgtcgctcg cgcaactgcg caaggaagcc gccggcatga
     4081 tgggg
//
LOCUS       DATMQB010000243         3621 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1950146, whole genome shotgun sequence.
ACCESSION   DATMQB010000243 DATMQB010000000
VERSION     DATMQB010000243.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3621)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3621)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3621
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1950146"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1019
                     /gene="hemW"
                     /locus_tag="VNY79_07400"
     CDS             <1..1019
                     /gene="hemW"
                     /locus_tag="VNY79_07400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051989 - coproporphyrinogen dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="radical SAM family heme chaperone HemW"
                     /protein_id="HWX72307.1"
                     /translation="EIAAIAARVPGRTVSTIFIGGGTPSLMQPATVAAVLDAVARHWR
                     IAPGAEVTLEANPTSVEATRFLGYRAAGVNRVSLGVQALDDGALAELGRLHSAREALD
                     AVAVARGVFERYSFDLIYARPRQTPRDWASELRRALAEAGEHLSLYQLTIEQETPFAA
                     LHAAGKLKTPDEDVARAFYDTTQEVCAAHGLPAYEVSNHARSGGECRHNLIYWRAHEY
                     AGVGPGAHGRVDIAGERHATATEKRPEAWLAQVEARGHGLTTDDLLTRQEIADEFLLM
                     GLRLAEGIDMERYAAIAGRTLDPDRIAALREHDLIETTAAGRLRVSMAGFPVLDAVVA
                     DLAA"
     gene            complement(1082..2314)
                     /locus_tag="VNY79_07405"
     CDS             complement(1082..2314)
                     /locus_tag="VNY79_07405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein activator"
                     /protein_id="HWX72308.1"
                     /translation="MSAELPVLPSGALPSRRRSVAGLLATAGAFLAGCSGNSTFFQSM
                     PTPQTQPQTTEAPPPGPGGTVGAGEVKAALILPVSATGNAGIAGQAMRNAAEMALAEF
                     NAPNVQLLVKDDAGNTDAARQGAQQALDEGAAIILGPLFAQSVSAVGQVARARNVPVI
                     AFSTDANVASRGVYLLSFLPESDVARIVQYAGSAGKRSYGALIPDNPYGTVVEAAFRQ
                     DVARRGGQVVAIERYPHDKTGMAGPVKNVAQAATRVDAIFIPDSGDVLPDVVQTLTAN
                     GVNTKKVQLLGTGLWDDPRIYSVPAVDGGWYAAPDSAGYRNFAQRYRARYKQDPVRTA
                     TLAYDAVALIAALVKTQGPQRFSPETLTNPSGFSGIDGLFRFRADGTNERGLAVLRVT
                     SSGAQVISPPPRSFGSSI"
     gene            2463..3410
                     /gene="rsmI"
                     /locus_tag="VNY79_07410"
     CDS             2463..3410
                     /gene="rsmI"
                     /locus_tag="VNY79_07410"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0000451 - rRNA 2'-O-methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HWX72309.1"
                     /translation="MKHALSSPPGRDDRPQRSYTVAGHLVEVPRLAPGLHIVATPIGN
                     LGDITLRALAVLAGADLIACEDTRVTRRLLDRYAMATPLTPYHDHNAETARPKLLRRL
                     AEGAAIALVSDAGTPLVSDPGYKLARAAHEAGSAITAVPGASALLAALTVSGLPTDQF
                     FFAGFLPPKETARRSRIAALARIPATLILFEGGSRIAATLADLAAELGAREAALCREL
                     TKIHEEVRRGDLIALAESAASGELRGEFVLVVGPPAAEQPSASDADLLLRQALARVSV
                     KDAVGEVAEATGLPRRKIYQRALALAKEADGKADHGAAD"
     gene            3394..>3621
                     /locus_tag="VNY79_07415"
     CDS             3394..>3621
                     /locus_tag="VNY79_07415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HWX72310.1"
                     /translation="MAQRIEPSNPRSGPRQERVAAFKFGLSAESRAAMFLIAKGYRIA
                     ARRWKTPFGEIDIVARRRHALVFVEVKARERI"
BASE COUNT          559 a         1272 c         1248 g          542 t
ORIGIN      
        1 cggagatcgc ggcgattgct gcgcgcgtgc cgggccggac cgtctccacg atcttcatcg
       61 gcggcggcac gccctcgctg atgcagccgg cgacggttgc cgcggtgctc gatgccgtcg
      121 cgcggcattg gcgcatcgcg cccggcgccg aggtgacgct cgaagccaat ccgacgagcg
      181 tcgaggcgac gcgtttcctc ggctaccgcg ccgccggcgt caatcgcgta tcgctcggcg
      241 tgcaggcact cgacgacggc gcgctggccg agctcgggcg tctgcattcg gcgcgcgagg
      301 cgctcgacgc ggtcgccgtc gcccgcggcg tgttcgagcg ctattcgttc gatcttatct
      361 acgcgcggcc gcggcagacg ccgcgcgatt gggcgagcga gctgaggcgg gcgctcgccg
      421 aggccggcga gcatctttcg ctttatcagc tgaccatcga gcaggagacg ccgttcgcag
      481 cgctccatgc ggccggcaaa ctcaaaacgc cggacgagga cgtcgcgcgc gctttctacg
      541 acacgacgca ggaggtctgc gccgcgcacg gcctgcccgc ctacgaggtt tccaaccatg
      601 cacggtccgg cggcgagtgc cggcacaatc tcatctactg gcgggcgcac gaatatgccg
      661 gcgtcgggcc cggggcccac gggcgcgtcg acattgctgg cgagcgccac gccaccgcga
      721 cagagaaacg ccccgaggca tggctcgcgc aggtcgaggc gcgcgggcac gggctcacca
      781 ccgacgacct gctcacgcgc caggaaattg ccgacgagtt cctgctcatg ggtctgcggc
      841 tcgccgaagg catcgacatg gaacgctacg ccgccatcgc cggccggaca ctcgatccgg
      901 accgcatcgc cgcgctgcgc gaacacgacc tgatcgaaac gaccgccgcc ggccgcctgc
      961 gcgtgtcgat ggccggattt cccgtgcttg atgcggtcgt cgccgacctc gcggcatgat
     1021 caagacgtag atcgcgagcg atgcaccggc gagcaaagtt ccgccgcttc gccgcgcatc
     1081 gtcagattga ggagccgaag ctgcgcggtg ggggcgagat gacctgcgct cccgacgacg
     1141 tgacgcgcag caccgcgaga ccgcgctcgt tggtgccgtc ggcgcggaaa cggaacagcc
     1201 cgtcgatgcc ggagaagcca gaagggttgg tcaatgtttc cggcgagaac cgctgcgggc
     1261 cctgggtctt caccagggcg gcgatcagcg cgaccgcatc gtaggcgagc gttgcggtgc
     1321 gcaccgggtc ctgtttgtag cgggcgcgat agcgctgcgc gaagttgcgg taaccggcgg
     1381 aatcgggcgc cgcgtaccag ccgccgtcga ccgccgggac cgagtagatg cgcggatcgt
     1441 cccagagccc ggtgccgaga agctggacct tcttcgtatt gacgccgttc gccgtcagcg
     1501 tttggaccac gtcgggcaga acatccccgc tgtcgggaat gaagatcgcg tcgacccgcg
     1561 tcgccgcctg tgcgacgttc ttcaccggcc cggccatgcc cgtcttgtcg tgcgggtagc
     1621 gttcgatcgc gaccacctgt ccgccgcggc gcgcgacatc ctgcctgaac gccgcttcga
     1681 ccacggtgcc atatggattg tcggggatga gcgcgccata ggaccgcttc ccggccgagc
     1741 cggcatattg cacgatgcgc gcgacatccg attccgggag aaagctcaag agatagacgc
     1801 cgcgcgaggc gacgttggcg tcggtcgaga aggcgatcac cggcacgttg cgggcacgcg
     1861 ccacctggcc gacggcgctg accgattggg caaagagcgg cccgaggatg atggcggccc
     1921 cctcgtcgag ggcctgctgc gccccttgcc gcgccgcgtc ggtgttgccc gcgtcgtcct
     1981 tcaccagaag ctggacattg ggagcgttga actcggcgag cgccatttcc gcggcgttac
     2041 gcatcgcctg gccggcgatc ccggcattgc cggtcgccga aaccggcagg atgagagcgg
     2101 ctttgacttc gccggcgccg accgtcccgc cgggtcccgg cggcggagcc tccgtcgtct
     2161 gcggctgcgt ctgcggcgtc ggcatcgact ggaagaaggt cgagttgccg gagcagccgg
     2221 ccaggaacgc gcccgccgtc gccagcaggc ctgcaacgga tcggcgccgc gacggcaggg
     2281 cgcccgacgg cagaaccggc aattccgcgg acactgcggt tctcctcacg gccgcctcag
     2341 cgccgcagcc catagggcgg cgccaatctg tcattctggc ggcgaatggt taaccgaatg
     2401 gaaaggataa ggaatccttc agaaccatga cggccgcgcg gcccggcgtt aaggtgacga
     2461 cgatgaagca tgcgctttcg agcccgcccg gtcgagatga ccgcccgcaa cggtcctaca
     2521 ccgtcgccgg ccatttggtc gaggtgccca ggctcgcgcc cggcttgcat atcgttgcca
     2581 cgccgatcgg caatctgggc gatatcacct tgcgcgcgct cgctgtgctg gccggcgccg
     2641 acctgatcgc ctgcgaagac acgcgcgtga cgcgccggct gctcgaccgc tacgccatgg
     2701 cgaccccgct gacgccgtac cacgaccaca acgccgagac ggcgcggccg aagctgctgc
     2761 ggcgtttggc ggaaggcgcc gccatcgcgc ttgtctctga tgccggcacg ccgctcgtgt
     2821 ccgatcccgg atacaagctc gcgcgcgccg cccatgaagc cggatccgcg atcaccgccg
     2881 tacccggggc ctcagcgctg ctcgccgcct tgaccgtgtc aggcctgccg accgatcagt
     2941 ttttctttgc cgggttcctg ccgccgaagg aaacggcgcg ccgcagccgc atcgccgcgc
     3001 tcgcccggat ccccgcgact ctcattttgt tcgaaggcgg gtcgcggatc gccgcgacgc
     3061 tcgccgacct cgccgccgaa ctcggcgccc gcgaggccgc tctgtgccgc gagctcacca
     3121 agattcacga ggaagtccgg cgcggcgacc tcatcgccct ggcggagagc gccgcgagcg
     3181 gcgaactgcg cggcgagttc gtgctggtcg tcggaccgcc ggccgcggag caacccagcg
     3241 ccagcgatgc ggatttactg ttgcggcaag ccctcgcccg cgtctccgtg aaggacgccg
     3301 tcggtgaggt cgcggaagca accgggttgc cgcgccgcaa gatctaccag cgcgcgctgg
     3361 cgctcgccaa ggaagcggat gggaaggcgg atcatggcgc agcggattga gccgtccaat
     3421 ccccggagcg ggccgcggca ggaacgcgtc gcggcattca agttcggcct ctccgcggaa
     3481 agccgcgcgg ccatgttcct catcgccaag ggctaccgca tcgcggcgcg gcgctggaag
     3541 acgccgttcg gcgagattga catcgtcgcc cggcgccgcc acgcgctcgt cttcgtcgag
     3601 gtcaaggcgc gcgagcgcat c
//
LOCUS       DATMQB010000244         4730 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1329733, whole genome shotgun sequence.
ACCESSION   DATMQB010000244 DATMQB010000000
VERSION     DATMQB010000244.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4730)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4730)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4730
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1329733"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            277..690
                     /locus_tag="VNY79_07420"
     CDS             277..690
                     /locus_tag="VNY79_07420"
                     /inference="COORDINATES: protein motif:HMM:NF012515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PfkB family carbohydrate kinase"
                     /protein_id="HWX72311.1"
                     /translation="MLDLVDILVLNETELSAIAGAEIGESASDAHIVEAARTLQRRDG
                     QSVVVTLGRRGAVAWAQGKALTIPGKAVESRDPTGAGDCFVGAVAAQTALGVPIAPAL
                     EYANVAASICVQRMGAGPSMPTAAEVAENLRLPRG"
     gene            887..1903
                     /locus_tag="VNY79_07425"
     CDS             887..1903
                     /locus_tag="VNY79_07425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018185466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HWX72312.1"
                     /translation="MTQTRRELIQGAAVGGGAVGLLGGFGFNPLVTAAMAKEAGKATR
                     PLKAAFSNAGLQATWCAQGKQAAEYWGSLFNVEVTWFDGQLDAVKQRSAIDNMASQKW
                     DFVAIQAFGIGTLTAPVNKMIDAGIPVIDMDTLIAPLDTIKVLSFLAPDNEFMGASVS
                     QALVNAINGEGTIVMTQGALGHTGAQGRARGFKSVVSKFPKVQVLDEQPADWDVTKVA
                     RIWETLLTKYPKIDAAFFHNDDMALAAAKVMQAKGRTETKIGGVDAMPPAIKAVQGGQ
                     MYATVRNPSCRIHGGAVIAGVSAVINGAKTGTDIPKNIVTDGPVVTKANADGMLWMED
                     QFLI"
     gene            1930..3426
                     /locus_tag="VNY79_07430"
     CDS             1930..3426
                     /locus_tag="VNY79_07430"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HWX72313.1"
                     /translation="MGPALLELSGISKSFGGVQALRAVDFSLKVGEIHGLVGENGAGK
                     STLMKIIAGVHAGYDGEMRVDGRPVHFRSSGDALAAGIGMVHQELSVAPELTVAENVF
                     LGVQPVNRFGIVAWRFMARQASEQLKSLGLDIDPRARLGDFPIGVQQLVELSRVLFSG
                     ARIIILDEPTSALSPPEIERLFEVLIRLKRGGRSIIFISHFLEDILKVSDEITIFRNG
                     RKVATTPVTTAIDKGWIIERMIGAGREELEESYLGEIKLTSRREAPVVLEVKDLTLAP
                     AYRDVSFAARGGEVLGIYGFMGCGQLELARTLFGKLRPDHGALAIAGKPANLGNTSAA
                     RQAGVAYVAESRRAMLFGEEPIYKNISIAVLRRLARFLLKPDRERALAGEQVKALDIR
                     PPNVEARLRAFSGGNQQKVALAKWLTHAPRILLLAEPTRGMDVGAKEDVLKIVRALRD
                     QGIAIVVFSTEPETVLSLADRVLVMRKGEIAREFADEAISKDRLLAAA"
     gene            3441..4478
                     /locus_tag="VNY79_07435"
     CDS             3441..4478
                     /locus_tag="VNY79_07435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX72314.1"
                     /translation="MDATKSNIAVAAKRPLRLADFARNQLRNIAPFITLLFLVLFFSI
                     ASPSFATLDNLENILQQVSVTGIIAVGLTFVILTAEIDLSVGAIANATAIVLTFFTLQ
                     PDYVNIGNIPMPGAIAIIFALFACFALGLLTAFGVTRIGIPSFIMTLAMMQIGAGISA
                     VLVRGQIAYSVPPLIQTLGSQSIAHIPWIIIVAALFLLVAHLVLTYTRFGRYVYMVGG
                     NREAAEYSGVNTRLVVGAVMVISAMCSGVAGMIGVAYFGSAQQNEFDTFLLDAIAAVV
                     VGGTSLFGGRGGIGNTIVGLFVLGVLNNGLDYVKIDSFLKILIRGLILLAALVINIYA
                     ERLRAPRSAGA"
     gene            4499..>4730
                     /locus_tag="VNY79_07440"
     CDS             4499..>4730
                     /locus_tag="VNY79_07440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-methyl-5-thioribose kinase"
                     /protein_id="HWX72315.1"
                     /translation="MAAAYAPVDGAKLSSILAGLPDLRARLGGKPAEWRVREVGDGNL
                     NLVFIVEGPAGGLVVKQALPYVRLVGESWPLPL"
BASE COUNT          777 a         1615 c         1528 g          810 t
ORIGIN      
        1 acgtgggcct caagtttctg cgcgacacgg cggaggcgcg taccggcaca gccgtcatca
       61 cggtggcgga tgccgacaac tcaatcgtcg tcatcccggg cgccaacgca ttgctgtcgg
      121 aacgcgacgt ggcggagccc gtcttggaca gaggcgacgt cgcggtcagt cagttcgaga
      181 ttcctctgcc gaccgtcacg gccttctttt ccagggcgcg atccgccggc gccatgactc
      241 ctcaatccgg cgccggccgc ggcgttcgac cgcggcttgc tcgacctcgt cgacatcctc
      301 gttctcaacg agaccgagct tagcgcgatt gcaggcgccg agattggcga gagcgcttcc
      361 gacgctcaca ttgtcgaagc cgcacgcacg ctgcagaggc gagacggcca gagcgttgtg
      421 gtgacgctgg gccgccgcgg cgcggtggcc tgggcgcagg gcaaggcgct caccattccc
      481 ggcaaggccg tggaaagccg ggacccgacc ggcgccggcg actgcttcgt cggagcggtt
      541 gctgcacaaa ccgcgctcgg cgtaccgatt gcgccggcac tggaatacgc gaacgtggcc
      601 gcctcgatct gcgtgcagcg gatgggcgcc gggccctcga tgcccaccgc ggccgaagtc
      661 gcggaaaatc tccgactgcc gcgcggctag atcggcaccg acattttcac tgctccgtga
      721 gcgattacgg gcgggctcag cacgcccggg cccaccaacc cctgcgtcgc actgcctcac
      781 gccggccgca gcctgcttga agtcggttcc gcccccgtgt catgctggtg cggggcaaac
      841 tcaacctcaa ccaatggcgg caatgccaag ttttcgggag gaatgcatga ctcagacgag
      901 gcgcgaactc atccagggcg ccgcggtcgg cggcggtgcg gtcggcctgc tcggcggctt
      961 cggcttcaat cctctcgtca ccgcggccat ggccaaggaa gcgggcaagg cgacgcggcc
     1021 gctgaaagcc gccttctcca acgccggcct gcaggcgacg tggtgcgcgc agggcaagca
     1081 ggcggccgag tattggggca gcctgttcaa cgtcgaggtc acctggttcg acggccagct
     1141 cgatgctgtc aagcagcgct cggcgatcga caacatggcc tcgcagaagt gggatttcgt
     1201 ggccatccag gctttcggca tcggcacgct caccgcgccg gtgaacaaga tgatcgacgc
     1261 cggcatcccg gtgatcgaca tggacacgct gatcgccccg ctcgatacga tcaaggtgct
     1321 gagcttcctc gcgcccgaca acgaattcat gggcgcctcg gtctcgcagg cgctggtcaa
     1381 tgccatcaac ggcgaaggca cgatcgtcat gacccagggc gcgctcggcc acaccggcgc
     1441 gcaggggcgc gcgcgcggct tcaagtcggt ggtgtcgaaa ttccccaaag tgcaggtgct
     1501 cgatgagcag ccggccgact gggacgtgac caaggtcgcc cgcatctggg agaccctgct
     1561 gaccaaatat ccgaagatcg acgcggcgtt cttccacaat gacgacatgg cgctggccgc
     1621 ggccaaggta atgcaggcca agggacgcac cgagaccaag atcggcggcg tcgacgccat
     1681 gccgccggcg atcaaagcgg tccaaggcgg gcagatgtac gcgaccgtgc gcaatccatc
     1741 gtgccgcatt cacggcggtg cggtcatcgc cggcgtatcg gcggtcatca acggcgccaa
     1801 gaccggtacg gatattccga agaacatcgt caccgacggg ccggtcgtta ccaaggccaa
     1861 cgccgacggc atgctgtgga tggaggacca gttcctcatt tgagcgaacc gctggaaagt
     1921 ccagctgcga tgggtccggc gctgctcgaa ctctccggca tctccaagtc gttcggcggc
     1981 gtgcaggccc tgcgcgccgt cgatttttcg ctgaaggtcg gcgagatcca cggcctcgtc
     2041 ggcgagaacg gcgccggcaa gagcacgctg atgaagatca tagccggcgt gcacgccggc
     2101 tatgatggcg aaatgcgcgt cgatggacgc ccagtgcatt tccgctcctc aggcgatgcc
     2161 ctcgccgccg gcatcggcat ggtgcaccag gagctttcgg tcgcgccgga gctcaccgtt
     2221 gccgagaacg tgtttctcgg cgtgcagccg gtcaaccgct tcggcatcgt ggcctggcgc
     2281 ttcatggcgc gccaggcgag cgagcagctc aagagcctcg ggctcgacat cgatccgcgc
     2341 gcgcggctcg gcgatttccc aatcggcgtg cagcaactcg tcgagctttc ccgcgtgctg
     2401 ttctccggcg cgcgcatcat tattctcgac gagccgactt ccgccctgtc gccgccggag
     2461 atcgagcggc tgttcgaggt tctgatcagg ctcaagcgcg gcggccgcag catcatcttc
     2521 atctcgcact tcctcgagga cattttgaag gtttccgacg agatcacgat cttccgcaac
     2581 ggccggaagg tcgcgaccac gccggtgacg acggcgatcg acaaggggtg gatcatcgag
     2641 cggatgatcg gcgccgggcg cgaagagctc gaggagagct atctcggcga gatcaagctc
     2701 acgagccgcc gggaggcgcc ggtcgtgctc gaggtcaagg atttgacgct ggcgccggcc
     2761 tatcgcgacg taagctttgc cgcgcgcggc ggcgaggtgc tcggcatcta cggcttcatg
     2821 ggctgcggcc agctcgagct ggcgcgcacg ctgttcggca agctgcggcc cgatcacggc
     2881 gcgctcgcca tagccggcaa gccggcgaac ctcggcaata ccagcgccgc gcgccaggcg
     2941 ggcgtcgcct atgtcgccga gagccgccgc gccatgctgt tcggcgagga gccgatctac
     3001 aagaacatat cgatcgcggt gctgcggcgg ctggcgcggt ttctgctcaa gcccgaccgc
     3061 gagcgggcgc tcgccggcga gcaggtcaag gcgctcgaca tccgcccacc caacgtcgag
     3121 gcgcggctgc gcgccttttc cggcggcaat cagcagaagg ttgcgctcgc caagtggctc
     3181 acccacgccc cgcgcatcct gctgctcgcc gaaccgaccc gcggcatgga cgtcggcgcc
     3241 aaagaggacg tcctcaagat cgtgcgggcg ctgcgcgacc agggtatcgc catcgtcgtg
     3301 ttctcgaccg agccggagac ggtgctttcg ctcgccgacc gcgtgcttgt gatgcgcaag
     3361 ggcgagattg cgcgcgaatt tgccgacgaa gcgatcagca aggatcgcct gctggcggcc
     3421 gcttgacggg acgaacagat atggacgcga ccaagtccaa tattgccgtc gccgccaagc
     3481 gcccgctgcg gctcgccgat ttcgcccgca atcaactgcg caatatcgcg cccttcatca
     3541 cgctcctgtt cctcgtcctg ttcttcagca tcgccagccc ctcgttcgcg acgctcgata
     3601 acctggagaa catcctgcag caggtatcgg tcaccggcat catcgccgtc ggcctgacct
     3661 tcgtcatcct caccgccgag atcgatcttt ctgtcggcgc catcgccaac gccaccgcca
     3721 tcgtgctgac cttcttcacg ctgcagcccg actacgtgaa catcggcaac atcccgatgc
     3781 ctggcgccat cgcgatcatc ttcgcgctct tcgcgtgctt cgcgctcggg ctcctcaccg
     3841 ccttcggcgt cacccgcatc ggcatccctt ccttcatcat gacgttggcg atgatgcaga
     3901 tcggcgccgg catatcggcg gtcctggtgc gcgggcagat cgcctactcg gtgccgccgc
     3961 tgatccagac cttgggctcg cagtcgatcg cccacattcc ctggatcatc attgtcgccg
     4021 cgctgtttct gctcgtggcg catctcgtcc tcacctacac gcggttcggg cgctatgtgt
     4081 acatggtcgg cggcaatcgc gaggcggcgg agtattccgg cgtcaacacc cggctcgtcg
     4141 ttggcgcggt gatggtgatc tcggcgatgt gctcgggcgt cgccggcatg atcggcgtcg
     4201 cctatttcgg cagcgcccag cagaacgagt tcgacacctt cctgctcgac gccatcgccg
     4261 ccgtcgtcgt cggcggcacc agcctgttcg gcggccgcgg cggcatcggc aacaccatcg
     4321 tcggcctgtt cgtcctcggc gttctcaaca acgggctcga ctacgtgaag atcgacagct
     4381 tcctcaaaat cctcattcgc ggcctgatcc tgctggcagc gctcgtcatc aacatctatg
     4441 ctgagcggct ccgcgcgccg cgcagcgccg gtgcctgaga agcgggcgag ggcgcgagat
     4501 ggccgcagcc tacgcgccgg tcgacggcgc caaactttcc tcgatcctcg ccggcttgcc
     4561 cgacctgcgg gcaaggctcg gcggcaagcc ggccgagtgg cgcgtgcgcg aggtcggcga
     4621 cggcaacctc aatctcgtct tcatcgtcga ggggccggcc ggcgggctcg tggtcaagca
     4681 ggcgctgccc tacgtgcgcc tcgtcggcga atcctggccg ctgccgctcg
//
LOCUS       DATMQB010000245         2430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1950577, whole genome shotgun sequence.
ACCESSION   DATMQB010000245 DATMQB010000000
VERSION     DATMQB010000245.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2430
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1950577"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..650)
                     /gene="ubiG"
                     /locus_tag="VNY79_07445"
     CDS             complement(<1..650)
                     /gene="ubiG"
                     /locus_tag="VNY79_07445"
                     /EC_number="2.1.1.222"
                     /EC_number="2.1.1.64"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008934888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008689 - 3-demethylubiquinone-9
                     3-O-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 2-polyprenyl-6-hydroxyphenol
                     methylase/3-demethylubiquinol 3-O-methyltransferase UbiG"
                     /protein_id="HWX72316.1"
                     /translation="MERRTTATGTVDDDEVARFSRLAGEWWDARGPMAALHALNPVRL
                     AYIRDRAAAHFGRDPKRLDSLAGLRVLDIGCGAGILCEPLARLGAAVTGADPSAENIS
                     AARHHAAQSGVSVDYRNASAEALAEAGEIFDIVLAMEVVEHVADVGLFVRLAAAMVKP
                     GGLMVVATLNRTVKSFALAIVGAEYILRWLPRGTHQWEKFVTPNELEIALEQSRLRV"
     gene            complement(778..1452)
                     /locus_tag="VNY79_07450"
     CDS             complement(778..1452)
                     /locus_tag="VNY79_07450"
                     /inference="COORDINATES: protein motif:HMM:NF024809.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HWX72317.1"
                     /translation="MILYYWPGASSMVPHIVLEEIGTPYQRQLVDLARAEHKSDAYLK
                     INPHGKVPALAVDDAVLTENVAILTYLAKRFPEAHLLPDGMIEQARCLSMMAWFASAV
                     HTTFAHIIRPERFASDSAAHGNLKETARGVFWDNCKEINSQLDGRRWMMGTQYTVCDP
                     YALFFYDLATRIKLPMHELAAYAAFSTRMLERAAVSEVRRLEQDMAKGANAWRGQYYA
                     QPDTHH"
     gene            complement(1537..>2430)
                     /locus_tag="VNY79_07455"
     CDS             complement(1537..>2430)
                     /locus_tag="VNY79_07455"
                     /inference="COORDINATES: protein motif:HMM:NF019607.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent sugar dehydrogenase"
                     /protein_id="HWX72318.1"
                     /translation="IWSVPQVLGALRAGRSETLRIDQVPPQERRPVAGAYGAKMITQK
                     GVFGLVQGHQNRPLAIDPKSGALFVGVGSSGNLGIEPEPKATIQSFDANGGAQKTFAS
                     GMRNPTALAFQPETGELYALVQERDGLGDGLPADFLTRVQEGGFYGWPYAYLGKHPQA
                     GFADRAPEKVNATITPDLLFEAHSSALDLVFYDGEQFPPEYKGSAFVALKGSWNSSQP
                     TGYKVVRVPFKDGRPEGYYENFATGFWASGEQRAEVWGRPAALAVTKDGSLLVADDTG
                     GTIWRISYVGKRDDSASKDRR"
BASE COUNT          407 a          818 c          754 g          451 t
ORIGIN      
        1 acgcgcagcc ggctctgctc gagcgcgatc tcgagttcgt tcggggtcac gaacttttcc
       61 cattgatggg tgccgcgcgg cagccagcgc aggatgtatt cggcgccgac gatcgccagc
      121 gcaaagctct tcaccgtgcg attgagcgtg gcgacgacca tgagcccgcc cggcttcacc
      181 atcgccgccg ccaggcggac gaacaggccg acatcggcaa cgtgttcgac cacctccatg
      241 gcgagcacga tgtcgaagat ttccccggct tccgccagcg cctcggcgct ggcgttgcgg
      301 tagtcgacgc tgacgcccga ttgcgccgcg tgatgccgcg ccgccgaaat attctccgcc
      361 gatggatcgg cgccggtgac cgcggcgccg agccgcgcca gcggctcgca gagaataccg
      421 gcgccgcagc cgatgtcgag gacgcgcagc ccggcgaggc tgtcgaggcg cttcgggtcg
      481 cggccgaaat gcgccgccgc gcggtcgcgg atataggcga ggcgtaccgg attgagcgcg
      541 tgcagcgccg ccatcggccc gcgcgcgtcc caccattccc cggcgaggcg cgagaatcgc
      601 gcgacctcgt cgtcatcgac cgtgccggtt gctgttgtcc gccgttccat cggtccgctt
      661 ccgcgttgct tttctctttt gtacaccaaa ccgctgtggg cagggatgcg cgatggcgtg
      721 tccgcggagc gccgcggcga agtgtttgcg ccgtgaccgc ccagcggtgc cgtagctcta
      781 atgatgagtg tcgggctggg cgtaatattg tccacgccag gcattcgcgc ccttcgccat
      841 atcttgctcc aacctgcgca cctcggacac cgccgcgcgt tccagcatcc gcgtggaaaa
      901 cgccgcgtac gcagccagct cgtgcatcgg cagttttatt cgcgtggcca agtcatagaa
      961 gaacagcgcg tacggatcgc ataccgtgta ctgcgttccc atcatccatc gcctgccgtc
     1021 aagctggctg ttgatctcct tgcaattgtc ccagaacacg ccgcgggcgg tctccttgag
     1081 attgccgtgc gcggcgctat cgctggcgaa acgctcaggc cggatgatat gcgcaaaggt
     1141 agtgtgaacc gcgctcgcga accacgccat catcgataga cagcgtgctt gttcgatcat
     1201 gccgtcaggc agcagatgtg cttccgggaa tcgcttcgcc agatacgtca agatggccac
     1261 gttttccgtg agcaccgcgt catcgacggc aagagccggc acttttccat gaggattgat
     1321 cttcaaatag gcgtcgctct tgtgctcggc ccgcgccagg tcgacgagtt gtcgttgata
     1381 gggcgtcccg atttcttcga ggacgatatg cgggaccatc gacgatgcgc ctggccaata
     1441 gtagaggatc acgtggatac ctccgcagcg cggccgccca gcgatcgacc gtactctcgc
     1501 cgaaatgcac cggcaaacgc cggcgccagt ctcgctctac cgccggtcct tgctggcgct
     1561 gtcgtcgcgc ttgccaacat aggaaatacg ccagatcgtc ccgccggtgt catccgcgac
     1621 caagagcgag ccgtcctttg ttaccgccag cgcggccggt cgtccccaga cttccgcgcg
     1681 ctgctcgcct gaagcccaaa agccggtggc gaaattctcg taataacctt ccggccggcc
     1741 atccttgaac ggtacgcgca cgaccttgta gccggtgggc tgcgagctgt tccacgagcc
     1801 tttgagcgcc acgaaggcgc tccccttgta ttccggcggg aactgttcgc cgtcgtagaa
     1861 cacgagatca agcgccgacg aatgcgcctc gaacagcagg tcgggcgtga tcgtcgcgtt
     1921 gaccttctcc ggcgcgcgat cggcgaagcc ggcctgcgga tgcttgccga gataggcgta
     1981 gggccaaccg tagaacccgc cctcctgcac gcgggtcaag aagtccgctg gcagtccatc
     2041 gccgaggccg tcgcgctcct gcaccagcgc atagagctcg ccggtctccg gctgaaatgc
     2101 cagcgccgtc ggattgcgca tgccggacgc gaacgtcttt tgcgcgccgc cgttcgcatc
     2161 gaacgactgg atcgtcgcct tcggttcggg ttcgatgccc aggttgccgg aggaaccaac
     2221 gccgacaaaa agcgcgccgc ttttcggatc gattgccagc ggccggttct gatgaccctg
     2281 aacgaggccg aatacgcctt tttgcgtgat catcttggcg ccataggcgc cggccaccgg
     2341 ccttcgttcc tgcggcggca cctgatcaat gcgcagcgtt tcgctccgcc cggcgcggag
     2401 cgcgccgaga acctgcggca cgctccagat
//
LOCUS       DATMQB010000246         3130 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1631724, whole genome shotgun sequence.
ACCESSION   DATMQB010000246 DATMQB010000000
VERSION     DATMQB010000246.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3130)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3130)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3130
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1631724"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..327)
                     /locus_tag="VNY79_07460"
     CDS             complement(<1..327)
                     /locus_tag="VNY79_07460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007196054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX72319.1"
                     /translation="MNVAAAIFVDGLIDASWLFIVAVGLTLVFGVLNILNFAHGSLFA
                     VGAYTAASAVGWYYGGNFGPAFLGYFVMLGAALLVAVAMGPLLERGVLRLFYRRDEVV
                     IVLVTYA"
     gene            complement(402..1709)
                     /locus_tag="VNY79_07465"
     CDS             complement(402..1709)
                     /locus_tag="VNY79_07465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX72320.1"
                     /translation="MNYRGFAARCLIGAAALGALTAGAAAQDEKVFKLGVVAFLSGPA
                     AESFGKPAWDGAKTVIDALNAGTVIKPYDQVGFGGLKIEVDLIDEAGGATKQVEEVRN
                     AFERDHLDAVLGYISSGDCLAVAPAAEQLKKMLVLMDCGTPRIFEENKFKYVFRSAAH
                     GGMDNIAMARYLVKQGLKVADVGAINQDYAWGQDSWKDFKGSLAQLEPEAKAKVELWP
                     KLFAGQYGTEISTLLQEKPGLVYSSLWGGDLEAFVLQAAPRGLMKDRLVIFSASDHVL
                     QPLGNRMPDGVIVGARGANGQFAEPSPINDWFVAAVAKAHPGVNPVQPHYRGAQGVLA
                     VKTAVEKAMAANGGKKPTTEEMAAAMVGQEWDAPSGHIKLALGDGHQAIQSNAAGRTK
                     WDADAKMIKLIDIVRFAAECVNPPPGIKSADWIAEGFTGAKCN"
     gene            complement(1915..2850)
                     /locus_tag="VNY79_07470"
     CDS             complement(1915..2850)
                     /locus_tag="VNY79_07470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar kinase"
                     /protein_id="HWX72321.1"
                     /translation="MSEQKARAVCVGEVLIELARGADGRFALSCGGDTFNTAVYLARA
                     GVPGIEVAFASAIGDEPYSDSIIALAAAEGVSANLVLRVPGRQPGLCLVENGPSGERS
                     FRYWRDGAPVRELFELPDWMRVAESLISARLIYFSGITLSLYSNNGLGRFLAVLEAAR
                     QQGVKVAFDGNFRPRGWKGDLARTRTVFIETLKRVDIALPAFDDEAVLWGDPSPEATV
                     TRLQAFGIGEIVVKNGPNSALVAAAGAQEFVPVPEVVVPVDTTAAGDGFNAGYLAARL
                     AGRDPAQAAGAAHRLAGDVIRHPGALVPRAAAAMH"
BASE COUNT          535 a         1071 c         1001 g          523 t
ORIGIN      
        1 cgcgtaggtc acgagcacga tcaccacctc atcgcggcga tagaagaggc gcagcacgcc
       61 gcgctcgagg agcggcccca tcgcgaccgc gaccaagagc gccgcgccga gcatcacgaa
      121 atagccgagg aaggccggcc caaaattgcc gccgtaatac cagccgaccg cgctcgcagc
      181 ggtataggcg ccgacggcga acaggctccc atgggcaaag ttgagaatat tgaggacgcc
      241 gaagaccagc gtcagcccga ccgccacgat gaacagccag gacgcgtcga tcaatccgtc
      301 gacgaagatt gccgccgcga cgttcacgcg ccgtctctaa ggaaggaaac ggccgaagcg
      361 agccatgcgt ccgctccggc catctgctga aaatctgccg ctcagttgca cttggcgccg
      421 gtgaagcctt cggcgatcca gtccgccgac ttgatgccgg gcggcggatt cacgcattcg
      481 gcggcaaagc ggacgatgtc gatcagcttg atcatcttgg cgtcggcatc ccacttggtg
      541 cgcccggcgg cattcgactg gatggcctga tggccgtcgc cgagcgcgag cttgatatgg
      601 ccggacggcg cgtcccactc ctggccgacc atggctgccg ccatttcctc ggtggtcggc
      661 ttcttgccgc cattcgccgc catcgccttc tcgaccgcgg tcttcaccgc cagcacgcct
      721 tgcgcgccgc gatagtgcgg ctgcaccggg ttgacgcccg gatgcgcctt ggccacggcg
      781 gcgacgaacc agtcattgat cgggctcggc tccgcgaact ggccgttggc gccgcgtgca
      841 ccgacaatga cgccgtcggg catcctgttg ccgagcggct gcagcacgtg gtcggacgcg
      901 ctgaagatca ccaggcggtc cttcatcagg ccgcgcggcg ccgcctgcag cacgaatgcc
      961 tcgagatcgc cgccccagag gctcgaatag accagaccgg gcttctcctg cagcagcgtc
     1021 gagatctcgg tgccgtactg ccccgcgaac agtttcggcc agagttcgac cttcgccttc
     1081 gcctcgggct cgagttgcgc caggctgccc ttgaaatcct tccacgagtc ctggccccag
     1141 gcatagtcct ggttgatggc gccgacgtcg gcgaccttga gcccttgctt taccaggtag
     1201 cgggccatgg cgatgttatc catcccgcca tgcgcagccg aacggaagac gtatttgaac
     1261 ttgttctcct cgaagatgcg cggcgtgccg caatccatca gcacgagcat ctttttcagc
     1321 tgctcggccg ccggcgccac ggcgaggcaa tcacccgagc tgatgtagcc gagaaccgcg
     1381 tcgaggtgat cacgctcgaa cgcgttgcgg acctcctcga cctgcttggt ggcgccgccg
     1441 gcctcgtcga tcagatcgac ttcgatcttg aggccgccga acccgacctg gtcgtagggc
     1501 ttaatcacgg ttccggcgtt gagcgcgtcg atcaccgtct tggcgccgtc ccatgccggc
     1561 ttgccgaatg attccgcggc cggtccggac aggaaggcga caacgccgag cttgaatacc
     1621 ttctcgtcct gggccgccgc gccggccgtc aacgcaccaa gcgccgcggc accgatcaga
     1681 cagcgagcgg caaatccacg atagttcatg gctcggacct cccttggaga attgttggaa
     1741 cgtgccctcg cacagggccc tttttcgctt gccggtaatg tgcccaactt cgggggacct
     1801 gtccatgacc gtcgtggcgg catcaatgcc gcaccggcac cgctttcgtt cggcgcatcg
     1861 tcggcgacgg cggcgcgtga cgggcgaaga tcggcttcgg cggcgcgaat gatttcagtg
     1921 catcgcggcc gcggcgcgcg gcacgagcgc gccgggatgg cggatcacgt cgccagcgag
     1981 gcggtgcgcg gcgcccgccg cctgcgctgg gtcgcggccg gcgaggcggg cggcgagata
     2041 gccggcattg aaaccgtcgc cggctgcggt ggtgtcgacc ggcaccacca cttccggcac
     2101 cggcacgaat tcttgcgcgc cggcggcggc gacgagcgcg ctgtttgggc cgttcttgac
     2161 cacgatctcg ccgatgccga aggcttgcag ccgggtaacc gtggcctccg ggctcgggtc
     2221 gccccacagc acggcctcgt cgtcgaaagc cggcaatgcg atatcgacgc gcttgagcgt
     2281 ctcgatgaag acggtgcgcg tgcgcgccag atctcctttc cagccgcgcg gccggaagtt
     2341 gccgtcgaac gccaccttga cgccctgctg gcgcgcggcc tcgagcacgg cgaggaaccg
     2401 gccgagcccg ttgtttgaat aaagcgaaag ggtgatgccg gagaaataaa tgagccgggc
     2461 ggatatcagg ctttcggcga cgcgcatcca gtccgggagt tcgaacagct cgcgcaccgg
     2521 ggcgccgtcg cgccaatagc ggaagctgcg ttctccggaa ggaccgttct cgaccaggca
     2581 cagccccggc tgtcgcccgg gcacccgcaa aacgagattt gcggagacgc cctcggcggc
     2641 ggcaagcgcg atgatgctgt cggaataagg ctcgtcgccg atggcgctgg caaaagccac
     2701 ttcgatgccg gggacaccgg cgcgcgcgag gtagacggcg gtgttgaagg tgtcgccgcc
     2761 gcaggacagc gcgaacctgc cgtcagctcc gcgcgccaat tcgatcagca cttccccgac
     2821 gcagacggcg cgcgcttttt gttcgctcat cctaccgctc acggtcctgg ctcgcgcggt
     2881 cgcccagcca agcaggtcgc gaacatgggc gcgcgcctat cgcttggcaa tagtgcctcg
     2941 tcaaggacgc agcgacgatg aggacctgtt cgctccgcgc gcaatcactc gccacctttc
     3001 gatcgcccgc tcgaccgccc gccccaagcg ggtggcacgg cccgacgtaa tgttatattg
     3061 ttacattatg atccaccatc accatcgcgc cgatgacgtc catccctcgc cgacaatcgc
     3121 accgtcgttg
//
LOCUS       DATMQB010000247         3733 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2884327, whole genome shotgun sequence.
ACCESSION   DATMQB010000247 DATMQB010000000
VERSION     DATMQB010000247.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3733
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2884327"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1762
                     /locus_tag="VNY79_07475"
     CDS             <1..1762
                     /locus_tag="VNY79_07475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF6537 domain-containing protein"
                     /protein_id="HWX72322.1"
                     /translation="GGYFPAGATIHHRRELDALQRELREIEGLTVLIYDQTCAAEKRR
                     RRKRGLYPDPPKRAFINDLVCEGCGDCSAASNCVSVQPLETEFGRKRQIDQSNCNKDF
                     SCVEGFCPSFVTVHGGRPKQAVKPAFAVDDLFGNLPVPPPRPLEQPYNILIAGIGGTG
                     VITIGALLGMATHLEGKGCSALDFTGLAQKNGAVMSHVRIAAQPEDIAAVRVAAGGAD
                     LLLGCDMVVSASPAGLSRADYMKTRAIINADLQPTASFVINPDIDFEVGAMQRAIRDA
                     VGDDHLDIVDATGIATALLGDTIATNAFMLGFAFQKGLIPLSLEAICKAIELNGAAVE
                     MNTRAFSWGRLAAADMARVREAARFRAKPERPVKTLDEATAYRGAILTEYQNSAYAAR
                     YLQLVAAVRKAESAALPGSTELTEAVAKNLFKLMAYKDEYEVARLYADSAFAEKLRQR
                     FDGDFRLSFHLAPPLLARRDPSTGRLQKREYGAWMMPAFRLLARLKFLRGTAFDPFGY
                     TSDRKAERQLIADYEAAITRNIAVLRADRIAALARLARLPEMIRGYGHIKEDAIRTFT
                     AERSRAEADMENGSFAVAAE"
     gene            complement(1810..2649)
                     /locus_tag="VNY79_07480"
     CDS             complement(1810..2649)
                     /locus_tag="VNY79_07480"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HWX72323.1"
                     /translation="MSVAPETSGSAPLIAGDTSASAPRQSAQRFLDGLAFLVVLVALW
                     QLVYWKSEVAITGPVETVETAVALLGSENFWRHALASGRAFGASLILSCAGGVAIGLA
                     LGAHRFSGAVAAPMLTALYTIPKVTLYPMVLLVFGLGISAKVAFGVMHGIIPVVIFTM
                     DAVRNINPVLLKTARVLKLSPAQTAARILIPAVTPEIVTGLRVGFSLTLLGVIIGEMF
                     ASQQGLGFLIINGMNVHDVRTLTAVVLLLVLFAVASSSVLLALERRLNTARRAADATV
                     GLS"
     gene            complement(2655..3407)
                     /locus_tag="VNY79_07485"
     CDS             complement(2655..3407)
                     /locus_tag="VNY79_07485"
                     /inference="COORDINATES: protein motif:HMM:NF012738.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HWX72324.1"
                     /translation="MNRVTLVRLAVIAGFVVVIEALCRFGAINPLTLLPPSEMAAHLL
                     ALLASGEINEAMAGTFSNVAIAFALSVVVGFAVGVVIHALPRLRRVCDPLLASYYSVP
                     VFVFYPLLVSLLGLNRWPLVAIGFMFGVTAMVIATLNGLDRVPRVLLKLARVHRMSRS
                     AEVLRIVLPAAAPNLFTGGKLALAYAFIGVIAGEFILSGGGLGYAIAYAYDAFDNRTM
                     YALMLFVLIVVTAVNAALYVWEQRLLRRRGRG"
     gene            complement(3420..>3733)
                     /locus_tag="VNY79_07490"
     CDS             complement(3420..>3733)
                     /locus_tag="VNY79_07490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008838279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX72325.1"
                     /translation="TRLLMGDELLRLWRTTGATIFLITHAIDEAVMLADRVAVMSARP
                     GACIDMVTTGWGPDRDSRVVADTKFGELTARVWTRLRDESLKSLGRGADRARVPAAVP
                     A"
BASE COUNT          703 a         1258 c         1245 g          527 t
ORIGIN      
        1 cggaggctat ttccccgctg gagcgaccat tcaccaccgg cgcgaacttg atgccttgca
       61 gcgcgagctg cgcgagatcg agggtctcac cgtcctcatc tacgatcaga cctgcgcggc
      121 ggagaagcgg cggcggcgca agcgcggcct ctatcccgac ccgccgaagc gggcgttcat
      181 caacgatctc gtctgcgaag ggtgcggcga ctgctcggcg gcctcgaact gcgtttcggt
      241 gcagccgctg gagacggagt tcggccgcaa gcgccagatc gaccagtcca attgcaacaa
      301 ggatttctcg tgcgtcgaag gtttttgccc gagctttgtc accgtgcacg gcggccggcc
      361 gaaacaggcg gtcaaaccgg cgttcgccgt cgacgatctg ttcggcaatc tgccggtccc
      421 gccgccgcgg ccgctggaac agccctacaa cattctgatc gccggcatcg gcggcaccgg
      481 ggtcatcacc atcggcgccc tgctgggaat ggcgacgcat ctcgaaggca agggatgctc
      541 ggcgctcgac ttcaccggcc tcgcgcagaa gaacggcgcg gtcatgagcc atgtccgcat
      601 cgccgcgcag ccggaggaca ttgcagcggt tcgcgtcgcg gccggcggcg ccgatttgct
      661 gctcggctgc gacatggtcg tttcggcaag tccggccggg ctttcgcgcg ccgactacat
      721 gaagacccgc gccatcatca acgccgacct gcagccgacc gcgagcttcg tcatcaaccc
      781 cgacatcgat ttcgaggtcg gcgccatgca gcgcgccatt cgcgacgcgg tcggcgacga
      841 ccatctcgat atcgtcgacg ccaccggaat agctaccgcg ctcctcggcg acaccatcgc
      901 caccaacgcg ttcatgctcg gtttcgcctt ccagaaggga ttgatcccgc tgtcgctcga
      961 ggcgatctgc aaagccatag agctcaacgg cgccgccgtc gagatgaata cgcgggcgtt
     1021 ctcctgggga cggctggcgg ctgcggacat ggcgcgggtg cgcgaggcgg cgcgcttccg
     1081 ggcgaaaccc gaacgcccgg tcaaaacgct cgacgaagcg accgcctacc gcggtgccat
     1141 cctcaccgaa tatcagaaca gcgcctacgc cgcgcgctat ctgcagcttg tcgccgcggt
     1201 acgcaaggcg gaaagcgccg ctttgcccgg ctccacggag ctgaccgagg cggtcgccaa
     1261 gaacctgttc aagctcatgg cctacaagga cgagtacgag gtggcgcgcc tctacgccga
     1321 cagcgcgttc gccgaaaaac ttcgccagcg gttcgacggc gatttccgct tgagcttcca
     1381 cctcgcgccg ccgctgctgg cgcggcgcga tccatcgacc ggccgcttgc agaagcggga
     1441 atacggcgcg tggatgatgc cggcgttccg cctgctcgcg cgcctgaaat tcctgcgcgg
     1501 cacggcgttc gatccgttcg gatatacgag cgaccgcaaa gccgagcgcc agctgatcgc
     1561 ggactacgag gcggcgatca cgcgaaacat cgccgtcctt cgcgccgacc ggattgctgc
     1621 gctcgcgcgt ctcgcgcgcc ttccggaaat gatccgcggc tacggccaca tcaaggagga
     1681 cgcgatccgc accttcacgg ccgaacggtc ccgcgccgaa gccgacatgg aaaacggctc
     1741 tttcgcggtc gcggcggagt aatcacggca gcaggaggaa gccggcgcgc gctgcgcacg
     1801 tctcgcggat caagatagcc caaccgtcgc gtctgcggcg cgccgggcgg tattgagccg
     1861 gcgctcgagc gccaggagca cgctgctgct tgccaccgcg aacagcacca gcagcagcac
     1921 cacggcagtg agcgtgcgca catcgtggac gttcatgccg ttgatgatga gaaagccgag
     1981 gccctgctgc gacgcgaaca tttcgccgat gatgacgcca aggagcgtca gcgagaagcc
     2041 gacgcgcagc ccggtgacga tctccggcgt caccgccgga atgaggatcc gcgccgcggt
     2101 ctgcgccggc gagagcttga gaacgcgcgc ggtcttgagc aacaccgggt tgatgttgcg
     2161 cacagcgtcc atggtgaaga tgaccacggg gatgatcccg tgcatcacgc cgaaggccac
     2221 cttggcggag atgccgaggc cgaagaccag cagcaccatc ggatagagcg tcaccttcgg
     2281 gatcgtgtag agcgccgtca gcatgggggc agcgacggcg ccggagaagc ggtgcgcgcc
     2341 gagcgcgagg ccgatggcga cgccgccggc gcatgaaaga atgagcgacg cgccgaaggc
     2401 gcggccgctt gcgagtgcat ggcgccagaa attctccgag ccgagcagcg caaccgcggt
     2461 ctcgaccgtc tccactggcc cggtgatagc gacctcgctt ttccagtaga cgagctgcca
     2521 cagcgcgacg agcacgacga ggaacgcgag gccgtcgagg aaacgctgcg ccgactgccg
     2581 gggcgcgctc gccgaagtat cgccggctat gaggggcgcg gagccgcttg tttcaggggc
     2641 gacgctcatc gccttcaccc ccgcccgcgg cgccgcagca ggcgctgttc ccagacgtag
     2701 agcgccgcgt tcaccgccgt caccacgatc agcacgaaca gcatcagcgc atacatcgtg
     2761 cgattgtcga acgcgtcgta ggcataggcg atggcatagc cgagaccgcc gcccgagagg
     2821 atgaactcgc cggcgatgac gccgatgaag gcataggcga gcgcgagctt gccgccggtg
     2881 aacagattgg gcgcggcggc gggcaggacg atgcgcagga cctcagcgct gcggctcatg
     2941 cggtgcacgc gcgcgagctt gagcaacacg cgcggcacgc ggtcgaggcc attgagggtt
     3001 gcaatcacca tcgcggtgac gccgaacatg aatccgatcg cgaccagcgg ccagcggttg
     3061 agacccagga gagaaaccag cagcgggtag aacacgaaca ccggcaccga atagtacgaa
     3121 gcgaggagcg gatcgcaaac gcggcgcagc cgcggcaagg cgtggatcac gacgccgacg
     3181 gcaaagccga ccacgaccga gagcgcaaac gcgatcgcaa cattggagaa cgttccggcc
     3241 atggcctcgt tgatctcgcc cgacgccaaa agcgcgagca gatgcgccgc catctccgag
     3301 ggcggcagca gcgtcagcgg gttgatcgcg ccgaagcggc agagcgcctc gatgacgacg
     3361 acaaagccgg cgataacggc caggcggacg agcgtgaccc tgttcatcgc ggttgctgct
     3421 caggccggca cggcggccgg aacgcgagcg cgatcggcgc cgcggccgag cgatttgagc
     3481 gattcgtcgc gcagccgcgt ccacacccgc gcggtcagct cgccgaactt cgtatccgca
     3541 accacccgcg aatcgcggtc cggtccccag ccggtcgtca ccatgtcgat gcacgcgccc
     3601 ggccgcgccg acatgaccgc aacccggtcg gcgagcatca ccgcctcgtc gatggcgtgg
     3661 gtgatgagga aaatcgtcgc gccggtcgtg cgccagagcc gcagcagctc gtcgcccatg
     3721 aggagccggg tct
//
LOCUS       DATMQB010000248         3157 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3187800, whole genome shotgun sequence.
ACCESSION   DATMQB010000248 DATMQB010000000
VERSION     DATMQB010000248.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3157
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3187800"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1041
                     /locus_tag="VNY79_07495"
     CDS             <1..1041
                     /locus_tag="VNY79_07495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HWX72326.1"
                     /translation="EANIPILVARLSRVLAGHDWEVIFVDDNSPDGSAATARSIGEAD
                     SRVRCIRRIGRRGLAGACLEGMLASQARYLAVMDADLQHDEAVLADMLECLRAGRADV
                     AVASRYLDGGSAAGLSKQRSRVSRWSNALVRFLLGIDLTDPMSGHFMIRRDAFESVAP
                     AISSQGFKILLDILATARGRLRTVELPSAFRERQYGESKLDSKIALDFAALVTSKLTE
                     GAVSARFLLFCLVGLTGIGIHLSILRVLLAAALTFGTAQALATIGAITWNFVLNNLFT
                     YRDQRLTGWRFLTGLIRFQVICAIGAISNVGIATWIYDYDDVWWIAGLGGAAIGTVWN
                     FVVSAAFVWRQR"
     gene            1116..2921
                     /gene="lepA"
                     /locus_tag="VNY79_07500"
     CDS             1116..2921
                     /gene="lepA"
                     /locus_tag="VNY79_07500"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor 4"
                     /protein_id="HWX72327.1"
                     /translation="MSATPIENIRNFAIIAHIDHGKSTLADRLIQSTGGLTDREMVDQ
                     VLDSMDIERERGITIKAQTVRLNYRARDGRDYVLNLIDTPGHVDFAYEVNRSLAACEG
                     SLLVVDASQGVEAQTLANVYQALDNNHEIVPVLNKVDLPAAEPDKVKQQIQDVIGLDA
                     SDAILISAKTGLNVPEVLEAIVHRLPPPKGDAAAPLKALLVDSWYDSYLGVVVLFRVV
                     DGVLKKGQRIRMMGTDAAYEVDRVGVFTPKMQEAAELGPGEIGFLTASIKEVADTRVG
                     DTITDDKKPVATPLPGFRPAIPVVFCGLFPVDAADFENLRAAMGRLRLNDASFSYEME
                     TSAALGFGFRCGFLGLLHLEIIQERLEREFNLNLIATAPSVIYKIRLRNGQHLEIHNP
                     VDMPDPNHIEEMDEPWIEATILTPDEYLGSVLKLCQDRRGEQKELTYVGNRALLKYHL
                     PLNEVVFDFYDRLKSVSRGYASFDYHLTDYKPADLVKLQMLVNAEPVDALAMLVHRTR
                     AEQRGRAMAEKLKELIPPHMFQVPIQAAIGGKIIARETVRAFRKDVTAKCYGGDVTRK
                     RKLLDKQKEGKKRMRQFGKVEIPQEAFIAALKVDV"
BASE COUNT          569 a         1069 c          987 g          532 t
ORIGIN      
        1 gaagccaaca ttccgatcct ggtcgcgcgg ctcagccgcg ttctcgccgg ccatgattgg
       61 gaggtgatat tcgtcgacga taattcgccg gacgggagcg cggcgaccgc gcgctcgatc
      121 ggcgaagccg acagccgcgt gcgctgcatt cgccgcatcg gccgccgcgg tctcgccggc
      181 gcctgcctcg aggggatgct cgcgagccag gcgcgttacc tggcggtcat ggacgccgac
      241 ctgcagcatg acgaggccgt gctcgccgac atgctcgaat gcctgcgcgc cggccgcgcc
      301 gacgttgccg tcgccagccg ctacctcgat ggcggctcgg ccgcggggct gtcgaagcag
      361 cgttcgcgcg tgagccgctg gtcgaacgcg ctggtgcgct tccttctcgg catcgacctc
      421 accgatccga tgagcggcca tttcatgatc cggcgcgacg cgttcgaaag cgtcgcgccg
      481 gcgatctcct cgcaaggctt taagatcctg ctcgatattt tggcgacggc gcgcggccgc
      541 ctgcgcaccg tcgaactccc ttccgccttt cgcgagcggc aatacggcga gagcaagctc
      601 gacagcaaga tcgcgctcga tttcgcggcg ctggtgacgt cgaagctcac cgagggcgcg
      661 gtctccgcgc gcttcctcct gttctgcctg gtcggcctca ccggcatcgg catccatctc
      721 agcatattgc gcgtgcttct ggccgcggcg ctcactttcg gtaccgcgca ggcgctcgcc
      781 accatcggcg ccatcacctg gaatttcgtg ctgaacaacc tcttcaccta ccgcgaccag
      841 cggctgaccg gctggcgttt cctgaccggt ctcatccgct ttcaggtgat ctgcgccatc
      901 ggcgccatct ccaatgtcgg tatcgccacc tggatctacg attacgacga tgtgtggtgg
      961 atcgcggggc tcggcggggc ggcgatcggc acggtctgga acttcgtggt cagcgccgcc
     1021 tttgtctggc ggcaacggta gagcgccctg cggagaagga ttgaccgaga gagtgtgcgc
     1081 ttgccgctca cctgcaccga tgttatctgc gccgcatgag tgcgacgccc atcgaaaaca
     1141 tccgcaattt cgcgatcatc gcccacatcg accacggtaa atccacgctc gccgaccggc
     1201 tgatccagtc gaccggcggg ctgaccgacc gcgaaatggt cgatcaggtg ctcgattcga
     1261 tggatatcga gcgcgagcgc ggcatcacca tcaaggcgca gaccgtgcgg ctcaactacc
     1321 gcgcccgcga cggccgggac tacgtgctca acctgatcga cacgcccggc cacgtcgact
     1381 tcgcctacga ggtcaaccgc agcctcgccg cttgcgaggg ctcgctcctg gtcgtcgacg
     1441 cgagccaggg cgtggaggcg cagacgctcg ccaacgtcta ccaggcgctc gacaacaatc
     1501 acgagatcgt cccggtgctc aacaaggtcg atctgccggc ggccgagccc gacaaggtga
     1561 agcagcagat ccaggacgtg atcgggctcg atgcctccga cgccatcctc atttcggcca
     1621 agaccgggct gaatgtgccg gaagtgctcg aagcgattgt gcaccgactg ccgccgccca
     1681 aaggggacgc tgcggcgccg ctcaaggcgc tcctcgtcga cagctggtac gactcctatc
     1741 tcggcgtcgt cgtccttttc cgcgtggtcg acggcgtgct gaagaaaggc cagcgcatcc
     1801 gcatgatggg caccgacgcc gcctacgagg tcgaccgcgt cggcgtgttc acgccgaaga
     1861 tgcaggaagc ggccgagctc gggcccggcg aaatcggctt tctcaccgcc tcgatcaagg
     1921 aagtcgccga tacccgcgtc ggcgacacca ttaccgacga caagaagccg gtagcaacgc
     1981 cgcttcctgg cttccgcccc gcgatcccag tcgtgttctg cggcctcttt cccgtcgatg
     2041 ccgcggactt cgagaatttg cgcgccgcca tgggcaggct ccggctcaac gacgcgagct
     2101 tctcctacga gatggagacc tcggcggcgc tcggtttcgg cttccgctgc ggcttcctcg
     2161 ggctcctcca cctcgagatc atccaggagc ggctcgagcg cgaattcaat ctcaacctga
     2221 tcgcgaccgc gccgtcggtc atctacaaga tcaggctgcg caacgggcag catctggaaa
     2281 tccacaaccc ggtggacatg ccggacccga accatatcga ggagatggac gagccctgga
     2341 tcgaagcgac gatcctgacg ccagacgaat atctcggcag cgtcctgaaa ctgtgtcagg
     2401 accgccgcgg cgagcagaag gagctgacct acgtcggcaa ccgcgcgctg ttgaaatacc
     2461 acctgccgct caacgaagtg gtgttcgact tctatgaccg gctcaagtcg gtgtcgcgcg
     2521 gctacgcctc attcgattac cacctgaccg actacaagcc ggcagatctc gtgaagctgc
     2581 aaatgctggt caacgccgaa ccggtcgatg cgctggcgat gctcgtgcac cgcacccgcg
     2641 ccgagcagcg cggccgcgcg atggcggaaa agctcaagga actcattccg ccgcacatgt
     2701 ttcaggtgcc gatccaggcg gcgatcggcg gcaagatcat cgcccgcgag accgtgcgcg
     2761 ccttcaggaa ggacgtgacc gcgaaatgct acggcggcga cgtgacccgc aagcgcaagc
     2821 tcctggacaa gcagaaggaa ggcaagaagc gcatgcgcca gttcggcaag gtggagatcc
     2881 cgcaggaggc gttcattgcc gcgctgaagg tggatgtgtg atcagcttgc tgtgtaagaa
     2941 cagtagcgct ccgcctcgaa atccatcccc acgcacgcgg gcgagcgccg gagcgccccc
     3001 gaaagcgacc cagcggactg atcgcgggga cgacccgtcg tcattccggg gccgagcgaa
     3061 gcgaggagcc cggaacccat aaccgcgatc cgtgaatatg gattccgggc tcgcggcctg
     3121 cggccgcgcc ccggaatgac gacgggtcta ttcccaa
//
LOCUS       DATMQB010000249         2922 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4422640, whole genome shotgun sequence.
ACCESSION   DATMQB010000249 DATMQB010000000
VERSION     DATMQB010000249.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2922)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2922)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2922
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4422640"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..134)
                     /locus_tag="VNY79_07505"
     CDS             complement(<1..134)
                     /locus_tag="VNY79_07505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HWX72328.1"
                     /translation="MAKSQVSMKVNGQLIEALVEPRTLLIHFLRDQQNITGPHIGCET
                     "
     gene            complement(152..1018)
                     /locus_tag="VNY79_07510"
     CDS             complement(152..1018)
                     /locus_tag="VNY79_07510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HWX72329.1"
                     /translation="MIPGSFAYHRPTSVKEAVSLLAQWGDDGRALAGGHSLIPMMKLR
                     LAMPAHLVDLAGISELKGVQADGNDVVIGAMVTQHELVASELLTAKVPLLRETSLQVA
                     DPQVRYVGTIGGNVANGDPGNDMPAVMMCLGASYHVTGQGGESRIAARDFYQGAYFTA
                     LETGNVLTAVRIPVPPAGHGYAYEKLKRKIGDYATAAAAAVLTMAGGKVATCSIGLTN
                     VAETPLWAEEAAHILVGSTLDAATVKKAVAAAEAITAPATDARGPAHYRTKMAGVMLT
                     RALARASSRARG"
     gene            complement(1264..2526)
                     /locus_tag="VNY79_07515"
     CDS             complement(1264..2526)
                     /locus_tag="VNY79_07515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHYT domain-containing protein"
                     /protein_id="HWX72330.1"
                     /translation="MPVTYETWLVLLSIVMAIQGAYVGLSLAVQIADAAGLRRRLLLA
                     GATASFAVAIWTMHFVGMLAVRLPFPVDYLVFPTLLSFLVCAIVVGAAVYATSSGPLT
                     LLRLTLSACLMGGGIFTMHYIGMNALDASTYMVHDRVYVASSMAIAIAASGLALWLAT
                     GRGGRPPLIPSALVFGIAVSGMHYTAMGGVTLEPFVTTSSGAPALSVDLLAIVVAVVA
                     FGISGIFLLLLLPDSSRAAAKAAAVAESGAVTTAVPEMQPVPVTVAAALEGENPEFGR
                     GTYAPLGGAGAPPRRFARHLPVERDGGTHFLAVEDVVAIHANAHYTYIFDGSDKQFCP
                     LAIGDVESRLDSDRFVRVHRSHIVNIDRVVGYKRTGDNEMVEMASPHHYLVPVSRSRV
                     GSLKSRVATLNGSNPAVAPRRRHRFAAQ"
     gene            complement(2666..>2922)
                     /locus_tag="VNY79_07520"
     CDS             complement(2666..>2922)
                     /locus_tag="VNY79_07520"
                     /inference="COORDINATES: protein motif:HMM:NF015048.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hotdog domain-containing protein"
                     /protein_id="HWX72331.1"
                     /translation="EMACSRLVKDLLEPGQVTVGSRVVIDHLGPSKVGAELVIKAALL
                     QRERNRFKFSVTVEDGARTVAKVEHERAAVSLEKMMRALG"
BASE COUNT          507 a          940 c          998 g          477 t
ORIGIN      
        1 ctggtttcgc agccgatatg cggcccggtg atgttctgct ggtcgcgcag gaagtggatg
       61 agcagggtgc gcggctcgac cagcgcttcg atgagctggc cgttgacctt catggagact
      121 tgcgatttgg ccatgtcttt atttccttcg gtcagccgcg agcgcgcgag ctggcgcggg
      181 cgagcgcgcg cgtgagcatc acgccggcca tcttggtgcg gtagtgcgcc ggcccccggg
      241 cgtcggtggc cggcgccgtg atcgcctcgg cggccgccac cgccttcttc accgtcgcgg
      301 cgtcgagtgt tgagccgacg aggatgtgcg ccgcctcctc ggcccagagc ggcgtttcgg
      361 cgacgttggt gaggccgatc gagcaggttg cgaccttgcc gccggccatg gtgagcacgg
      421 cggccgcggc ggcagtggca tagtcgccga tcttgcgctt gagcttttcg taggcgtagc
      481 cgtggccggc gggcggtacc ggaatgcgca cggccgtgag cacgttgccg gtttcgagcg
      541 cagtgaagta ggcgccctgg tagaagtcgc gcgccgcgat ccggctttcg ccgccctggc
      601 ccgtgacatg atagctggcg ccgaggcaca tcatcaccgc cggcatgtcg ttacccggat
      661 caccattggc gacattgccg ccaatggtgc cgacgtagcg cacttgtgga tcggcgacct
      721 gcaacgaggt ctcgcgcagc agcggtacct tggcggtcaa aagctcggag gcgaccagct
      781 cgtgctgggt caccatggcg ccgatgacta cgtcgttgcc gtcggcctgg acgcctttga
      841 gctcggagat gccggcgaga tcgacgaggt gcgccggcat ggcgaggcgc agcttcatca
      901 tcgggatcag actgtgcccc ccggcgaggg cgcgtccgtc gtcgccccat tgggcgagca
      961 gactcaccgc ttccttgacg gatgtcggac gatggtaggc aaaagagccg ggtatcacgg
     1021 gcatcctccc tggcgcagtc ccgctgggcc agggtcatca ccgcagcctc tcgaaacctg
     1081 cgcgcaatac ctcttctgaa gtgtcaacac tggcggcttg tgcgttgcag cagcaacagc
     1141 aggttcacca gcttcgcaga gatgcaccaa acgccggctc agtgcaccaa cggaggtatt
     1201 gctgcacgga ttgcgtcagc atcactgacc tatcagcgca aggagcgctt gaggcgccgc
     1261 cgtctactgc gctgcaaaac ggtgccggcg gcgaggcgca accgcggggt tgctgccgtt
     1321 aagcgtcgcc acccgcgatt tcagcgagcc gacgcggctg cggctgaccg gcaccaggta
     1381 gtggtgcggg ctcgccatct cgaccatctc gttgtcgccg gtccgcttgt agccgacgac
     1441 ccggtcgatg ttgacgatat ggctgcggtg gacgcgcacg aagcgatcgc tgtccaggcg
     1501 cgactcgacg tcgccgatcg cgagcgggca aaattgcttg tcactgccgt cgaagatgta
     1561 cgtgtagtgc gcgttggcgt gaatagcgac cacgtcctcg acggcgagaa aatgcgtgcc
     1621 gccgtcgcgt tcgaccggca ggtggcgggc aaagcgtctt ggcggcgccc cggcgccgcc
     1681 aagcggcgcg taggtgccgc gtccgaattc cgggttctcg ccctcgagcg cggcggcaac
     1741 ggtcacgggc acgggctgca tttcggggac cgctgtagtc accgcgccgc tctcggcaac
     1801 cgcggcggct ttcgcagccg cgcgggatga atcgggcagg agcagcagga gaaagattcc
     1861 ggaaatgccg aacgccacga cggcgacgac gatggcgagc aggtcgaccg acagcgccgg
     1921 cgcgccggac gaggtcgtca caaacggctc cagcgtgacg ccgcccatgg ccgtgtagtg
     1981 catgccggaa acggcgatac cgaagacgag cgccgaagga atcagcggcg ggcgccctcc
     2041 ccggccggtg gcgagccaga gcgccagtcc cgacgcggca atggcgatcg ccatgctgga
     2101 ggcgacgtag acccggtcgt ggaccatgta ggtgctggca tcgagcgcgt tcatgccgat
     2161 gtagtgcatg gtgaagatgc cgccgcccat gaggcacgcg gacagtgtca ggcgcagcag
     2221 cgtcagaggt cccgaactgg tggcgtaaac cgcggcgccg accacgatcg cgcagaccag
     2281 gaacgacagc aacgtcggga agaccagata gtcgaccggg aacggaagcc gcaccgccag
     2341 catgccgacg aaatgcatgg tccagatcgc gaccgcgaac gaggcggtgg cgcccgctag
     2401 cagcagccgc cgtctcagcc cggcggcatc ggcgatctga accgccaggc tcaagccgac
     2461 ataggcgccc tgaattgcca tcacaatgga cagcaggacg agccaagtct cgtaggtcac
     2521 cggcatgccg tcatcccctc gctggtacgg gaacggctac ttcaccccat cgggcatgga
     2581 atgattatag ttcaagtttg cgacgaggcc gagacctccg cgacggccga agcaggccgc
     2641 ctgggcgaca tcgaggtctg cattctcagc ccagcgcccg catcatcttt tccagcgaaa
     2701 cggcggcgcg ctcgtgctcg accttggcga cggtgcgggc gccgtcttcg accgtgaccg
     2761 aaaacttgaa gcgattgcgt tcccgctgca gcaaggcggc cttgatcacc agttcggccc
     2821 ccaccttgct tgggccgagg tggtcgatga caacccggct gccaacggtg acctgtccgg
     2881 gctccagcag atccttcacc aggcgactgc aagccatttc cg
//
LOCUS       DATMQB010000250         2652 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1953586, whole genome shotgun sequence.
ACCESSION   DATMQB010000250 DATMQB010000000
VERSION     DATMQB010000250.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2652)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2652)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2652
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1953586"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..919)
                     /locus_tag="VNY79_07525"
     CDS             complement(<1..919)
                     /locus_tag="VNY79_07525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012047205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005436 - sodium:phosphate symporter
                     activity [Evidence IEA];
                     GO_function: GO:0015114 - phosphate ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0035435 - phosphate ion transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0044341 - sodium-dependent phosphate
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi symporter"
                     /protein_id="HWX72332.1"
                     /translation="MSGTTTLLQLGGYVALLLWGTHMVSTGVERGFGAELRLWLGRTL
                     SRPGRRMRFFAMLAGLAVTAVLQSSTATGLMVTSFAARGAIDLAPALAVMLGASLGST
                     LITQILAFNIAEVAPVLVLIGVVLFRSSDDGRSRNLGRAGIGLGLMLLALGSLVHTLE
                     PVENASALRAVLSSLGGEPILAVLIAAASTWACHSSVAVVLLIGSLAASGVVAPAGSL
                     ALVLGANLGSTLPALLEAGSHAARRLPLGNLLARAAGCIIVLPFLPMIAGFLAQIEPA
                     PARLVVNFHTAFNLALAVLFLPLTDWLAAL"
     gene            complement(926..1791)
                     /locus_tag="VNY79_07530"
                     /pseudo
     CDS             complement(926..1791)
                     /locus_tag="VNY79_07530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027621.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ferritin family protein"
     gene            complement(1788..>2652)
                     /locus_tag="VNY79_07535"
     CDS             complement(1788..>2652)
                     /locus_tag="VNY79_07535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015343352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peroxidase family protein"
                     /protein_id="HWX72333.1"
                     /translation="DTRSLKGKILASGLSIAQLVSTAWASAATFRGSDKRGGANGARI
                     RLAPQKEWEVNQPAQLANVLETFEDIQKEFNAAQTGGKKVSLADLIVLGGCAAVEQAA
                     KKAGHDVQVPFTPGRTDASQDQTDIESFAVLEPAADGFRNYLKAAYTSPEEMLVDRAQ
                     LLTLTAPEMTVLVGGMRALNANFGQSQHGVFTNRPGTLTNDFFVNLVDMGTVWKAVSE
                     AEDVFEGRDRATGELKWTGTRVDLVFGSHSQLRALAEVYACADSKEAFVKDFVAAWTK
                     VMNLDRYDLAR"
BASE COUNT          488 a          885 c          872 g          407 t
ORIGIN      
        1 ggagcgccgc gagccagtcc gtcaagggca ggaacagcac ggcaagggcc aggttgaatg
       61 ccgtgtggaa gttgaccacc agccgcgccg gcgccggctc gatttgcgcc aagaacccgg
      121 cgatcatcgg caggaacggc aatacgatta tgcatccggc cgcgcgcgcc aagagattgc
      181 cgagcgggag gcgccgcgcg gcgtgcgagc cggcttcgag gagcgccggc aaggtgctgc
      241 cgagatttgc gccgagcact agcgccaagg atcccgccgg cgcgacgacg ccagaagctg
      301 ccaatgagcc gatcagcagg acaaccgcga cgctggaatg gcatgcccag gtcgatgccg
      361 cggcgatcag caccgccaat attggctcgc cgcctaacga gctgagcaca gcgcgcagag
      421 cggaggcatt ctccactggc tccaacgtat gcaccagcga cccgagggcg agcagcatca
      481 gtccgaggcc gatgccggcc cggccgagat ttctgctccg gccgtcatcg gaggaccgga
      541 aaaggacgac gccgatcagc acgaggaccg gcgccacttc cgcgatgttg aaggccaaaa
      601 tctgggtgat caaggtgctg ccgaggctgg cgccgagcat gacggcgagc gccggcgcca
      661 gatcgatcgc gcctcttgcg gcaaacgatg tcaccatcag cccggtggca gtgctgcttt
      721 gcaacaccgc ggtcaccgcg aggccggcca gcatcgcaaa aaaccgcatc cgccgcccgg
      781 gccgcgagag ggtgcggccg agccacaggc gcagctctgc gccaaatccg cgctcgacgc
      841 ccgtgctgac catgtgcgtg ccccagagga gcagagcgac atagccgccg agttgcagaa
      901 gggtcgtcgt gccggacatg cctccttatc cgctgccgat tgcgatgccg gtcgcgaaga
      961 cgagcaggcc gccgacgaag acttgagacg cggccgacag cagcggcgtg tccatgtagc
     1021 ggttgcggac ccacgagatc gccgcgagtt cgacgactac gaccgccacg gcgatcgtga
     1081 tcgcgaccgt aaaggagggc accaggaacg gcaaggtgtg cccgagcccg ccgagcgcgg
     1141 tcatcgcgcc gcagacgagg ccgcgggccc aagggctgcc gcgcccggtc aacgagccgt
     1201 tgtcggacaa tgcttcggcg aaccccatcg aaatcccggc gccgatcgcg gctgcaaggc
     1261 caaccagaaa agtcggccaa gtcgcccgcg ttgcaaaggc ggcggcgaag agcggcgcca
     1321 aggtcgagac cgaaccgtcc atcagcccgg cgagaccggg ctgcacgatc tgcagaagaa
     1381 agagccgccg ctcggattcg ccctcctcct tctcgacctc gcccggcacg tattgtgcct
     1441 cgagctcctc cgcccgtgct tcgtggcggc gctcttcggc cgcgaggtcg ccgaggagct
     1501 ggcggatggc ggcgtcggtc gactgccgcg ccgcccgttg gtagaagcgc ttgctctccg
     1561 cctccatcag ctccgcctgg gcacgcactt tttcgaggcc gagcggccgt gcgagccaca
     1621 gcgacttgcg ctcgagaaag cctttcacgt cttgccggcg gatcagcggg atgtggtcgc
     1681 cgaacttctc gcggtagagg tcgaggaggc ggtgacgtgg ccgtcctcct cctccagagc
     1741 gatggcgagc gccaacagct cctgctccgt caagtcagag aagttcttca tcgggcaagg
     1801 tcgtagcgat ccagattcat caccttggtc cacgcagcca caaagtcttt cacaaacgcc
     1861 tccttcgagt cggcacatgc atagacttcc gcgagagctc ggagctggga gtgcgaaccg
     1921 aagacgaggt cgacacgggt gccggtccac ttcagctccc ccgtcgcgcg atcgcgtcct
     1981 tcgaacacgt cctcggcttc cgagacggcc ttccaaaccg tgcccatgtc gaccaggttc
     2041 acgaagaagt cgttggtgag cgtccctggg cgattcgtga agacgccgtg ttgcgactgt
     2101 ccgaagttcg cattcagcgc gcgcatgccg ccgacgagaa ccgtcatctc aggggcagtc
     2161 aacgtcagga gttgcgcccg atcgaccagc atctcctccg gcgaagtata tgcggccttg
     2221 aggtagttgc ggaacccgtc cgcggccggt tcgagcaccg cgaaggattc gatgtcggtc
     2281 tgatcctgcg acgcatccgt gcggcccggc gtgaagggaa cctgcacgtc gtgcccggcc
     2341 ttcttcgcgg cctgctcgac ggcggcgcag ccaccgagga cgatcagatc ggcgagcgag
     2401 actttcttcc ctcccgtctg cgccgcgttg aactcctttt ggatatcctc gaaggtttca
     2461 agcacgttcg ccagttgggc cggctggttg acctcccact ccttctgcgg cgcgaggcgg
     2521 atgcgcgcgc cgttcgcccc gccgcgcttg tcggagccgc ggaaagttgc cgccgacgcc
     2581 caagcggtcg agaccaattg ggcgatcgaa agacccgatg cgaggatttt gcccttgagg
     2641 gagcgggtgt cc
//
LOCUS       DATMQB010000251         4600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1633827, whole genome shotgun sequence.
ACCESSION   DATMQB010000251 DATMQB010000000
VERSION     DATMQB010000251.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4600
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1633827"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1157)
                     /locus_tag="VNY79_07540"
     CDS             complement(<1..1157)
                     /locus_tag="VNY79_07540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HWX72334.1"
                     /translation="MPAVSEPGFVHLHVHSSYSLLEGALTIARLAELAKKDRQPALAL
                     TDTDNMFGALEFSEKMASAGIQPIIGCAFGIDFGDQEKRGAAAEAWPRLVLLAAREGG
                     YRSLMRLSSRAYLETAPTEQPHIKLAWVAAEADGLIALTGGPGGPLDVAIGSGQSALA
                     LSRCEALQGLFGDRLYVELQRHGMPAERLAEPALIGLAYARGIALVAANEPFFAARDD
                     YEAHDALLCIAEGRLIADGERRQLTVEHRFKTRAEMAELFADLPEALAATVEIAERCA
                     FRPRTLAPILPRFSAGRSESDPGATEAAQAAREAEEAQELRRAALTGLEYRLAGHPLA
                     SGHSGEAYHERLAFELGVIESMKYAGYFLIVADFIQWAKAQGIPVGPGRGSG"
     gene            complement(2541..3275)
                     /locus_tag="VNY79_07545"
     CDS             complement(2541..3275)
                     /locus_tag="VNY79_07545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX72335.1"
                     /translation="MDDTTTKKEPAASSAATDDHPIVFLHGVSRRFRQGDTTLDILKG
                     AELALWAGQSVALVAPSGAGKSTLLHIAGLLEHADAGEVYIDAVATSHLSDMQRTRIR
                     RADIGFVYQFHHLLPEFSALENVMLPQMIRGLGRRGARARAVELLTYLGLKERLVHRP
                     AELSGGEQQRVAIARAVANAPRILLADEPTGNLDVRTSAHVFATLNQLVRASGLAAIV
                     ATHNLDIAAQMDRRVTIRDGAVVEVA"
     gene            complement(3285..4553)
                     /locus_tag="VNY79_07550"
     CDS             complement(3285..4553)
                     /locus_tag="VNY79_07550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0042953 - lipoprotein transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein-releasing ABC transporter permease
                     subunit"
                     /protein_id="HWX72336.1"
                     /translation="MPQPSGTHPFAPFEWMLSLRYLRARRREGFISVIAGFSFLGIML
                     GVATLIIVMAVMNGFRQELLEKILGLNGHLLIQPLESPLTDWDAVADRVAKLNGVRLA
                     APIVEGQALASSPFNASGVLVRGVRASDLEKLTSVARNIKQGTLEGFDQSQGIAIGSR
                     LAEQLSLRAGDNLTLVAPRGAVTPMGTTPRIKAYKIAAVFEIGMSEYDASFVFMPLTE
                     AQAYFNRAGDVTAIEVYTDDPDRVDRYRALVATAAARPIYMIDWRQRNATFFNALQVE
                     RNVMFLILTLIVLVAALNIVSGLIMLVKDKGSDIAILRTMGATQGAIMRVFLITGASI
                     GVVGTLVGFLLGTIICLNIESIRHFLSWLTNTELFSPELYFLSRLPADMNGGETTAVV
                     VMALALSLLATLYPSWRAARLDPVEALRYE"
BASE COUNT          806 a         1518 c         1546 g          730 t
ORIGIN      
        1 ccggagccgc ggcccggccc gaccggaatg ccctgcgcct tggcccactg aatgaaatcc
       61 gcgacgataa ggaagtagcc ggcgtatttc atgctctcga tcacgccgag ttcgaaggcg
      121 agccgctcgt gataggcctc gccgctgtga ccggacgcga gcggatgccc ggccagacgg
      181 tactcgagcc ctgttagcgc ggcgcggcgc agctcctgcg cctcctcggc ctcgcgagcg
      241 gcctgcgccg cttcggtcgc accgggatcg ctttcgctgc ggccggcgga aaaacgcggc
      301 aggatcggcg ccaacgttcg cggccgaaag gcgcagcgct cggcgatctc cacagtcgcc
      361 gcgagcgcct ccggcaggtc ggcgaacaat tcggccattt cagcgcgggt cttgaagcgg
      421 tgctccaccg tcagctggcg gcgttcgccg tcggcaatga ggcggccttc ggcgatgcag
      481 agcagcgcgt cgtgggcctc gtagtcgtca cgggcggcga agaacggctc gttggcggcg
      541 acaagcgcga tgccgcgcgc ataggcgagc ccgatcaagg ccggctcggc cagccgttcc
      601 gccggcatcc cgtggcgttg caattcgacg tacaggcgat caccgaacag accctgcaac
      661 gcttcgcagc gcgacagcgc gagcgcgctt tggccgctgc cgatcgcgac gtcgagcggc
      721 ccgcccggac cgccagtgag cgcgatcagg ccatccgctt cggccgccac ccaggcgagc
      781 ttgatgtgcg gctgctcggt cggcgccgtt tccagatagg cgcgcgaact caaccgcatc
      841 aggctccgat agcccccctc gcgcgcggcc aaaagcacga gacgcggcca tgcctcagcc
      901 gctgcgccgc gcttttcctg gtcgccgaaa tcgatgccga acgcacagcc gatgattggc
      961 tggatgccgg cgctcgccat cttctcggag aattcgagcg ccccgaacat gttgtcggtg
     1021 tcggtcaacg ccaatgccgg ctggcggtcc tttttagcga gctccgccag ccgcgcgatg
     1081 gtcagcgcgc cttccagcag cgaataggag gagtgcacgt gcaggtgcac gaagccgggt
     1141 tcggatacgg cgggcatgct catagatact cgcgtgtggc gattccgaaa ggagcgagca
     1201 tgcgtgagcg cccgcgctgc tgtccattgc ccggcgagct tcgggcgccc gccacgcaca
     1261 ggaagtttgc ttcgccgtcc gacccacacc acggcctcgg ggacggcgca gggtcggggg
     1321 cggcgaagcc gccaagcagc tcggtcagat cactccaagc acctgcgccc agaccgcgac
     1381 catagccatg aacaaggcga tagaggcgag cgcaccggcc tcctcgacga ctgcgcgaac
     1441 catgatgctt ccccatttct ctaggaacga aaaaggaaca tagttcactt aatgttccgg
     1501 agtcaacggg gggtaatggg tcagacccac tacccaactg gggggtactg ggtccgcccg
     1561 gaaacgcgtc ccatgatccc gacgacggct aagaaacagg gcggcttccg acgataggcc
     1621 cggccgccgt gcgggaagcg agggcgcacg ttcgaccgac tgcacagcga ggatcgagca
     1681 cccgccagag cgaccgcggc atgaaagcag cctgctctac agatgagaat tgctaaaacc
     1741 cagaattgct aagacgggcg tgagaagact gcgaacgttt ggcgcgcgcg gccaagcgac
     1801 cgattcgctc cctgcgcaac cgccacgcta cagcttgcgt ggcgagtttc tcgatctggt
     1861 cgaccgttgg gtcggcattg ttgcagggac gtcgaaccct ctgcgcgacc tttcattgct
     1921 cgacgtcgaa gatcggcttg gccgcgcgct tgcgcttctc ccggccgcga acggtcgctt
     1981 caccctttag ctcgccacga tccaaaacgg cgtgatttgt cgcacccggc aactgccgcg
     2041 gcaaaacgcc gtcgctcgga gcgccggaac agtccataat gcttcgcgtc gttgtcgtgc
     2101 tgcaatgttt ttcattgtat ctccgcgtcc gatccgaaac gaggaaggtc ttatgaggag
     2161 cctcacgatc accttgaccg ccatagcgtt cgcgctcggc acgacggctc tggcattgac
     2221 cgcccacgcg caaacgcagg gcgcggccac gatccaagcg caagcgcaga acgccacgcc
     2281 aacccatcag gtggcgtgcg gcggctgggg ccgctggtgc ccgcctggaa gccaccgcgt
     2341 ctgcagcccg atgcgctgct ggtgcgcccc ctgctgatca ccggcgcgtc cccttcgcga
     2401 cgatgccgca gggccgcctc ttcgggcggc ctcttgcttt tgcacgcagc cgtcacggcg
     2461 catgcagcgg cttcgccgcc tccgcggggc gggcttgatc gtggcgctgc gccagcggcg
     2521 acgcccttcg gccgtcgcgt tcaggcgacc tcgacgacgg cgccgtcgcg aatggtcacc
     2581 cgccggtcca tctgcgcggc aatgtcgagg ttgtgggtgg cgacgatggc ggcgaggccg
     2641 gaggcgcgca ccaattggtt gagcgtggca aagacgtgcg cggaggtgcg cacgtcgaga
     2701 ttgccggtcg gctcgtcggc caggaggatg cgcggagcgt tggcgaccgc ccgggcaatg
     2761 gcgacgcgct gctgttcgcc gccggaaagc tccgccgggc ggtgcaccag acgctccttg
     2821 agcccgagat aggtcaacag ctccacggcg cgcgcccgcg ctccacgccg ccccaggccg
     2881 cggatcatct gcggcagcat cacgttttcc agggccgaga actcgggcag caggtggtga
     2941 aactggtaga cgaagccgat gtcggcgcgg cggattcggg tgcgctgcat gtcggagaga
     3001 tgcgaggtcg cgaccgcatc gatgtagact tcaccggcgt cggcgtgctc caggagcccg
     3061 gcgatgtgca ggagggtcga tttcccggcg ccggatgggg cgaccagcgc caccgactgc
     3121 cccgcccaca acgcaagctc ggcgcccttg agaatgtcga gcgtggtgtc gccctggcga
     3181 aagcgccggc tgacgccgtg caggaagacg atcggatgat cgtcagtggc ggcgctcgac
     3241 gcggcgggct ccttttttgt cgtggtgtcg tccatcgcgc gcggtcactc gtagcgcaac
     3301 gcttcgaccg gatcgagccg cgccgcgcgc cacgagggat agagcgtcgc cagcagcgaa
     3361 agcgccagcg ccatcaccac gaccgcggtc gtttcaccgc cgttcatgtc ggcgggcagc
     3421 cgcgacagga aataaagctc gggcgaaaac agctcggtgt tggtgagcca cgacaggaag
     3481 tgccggatcg attcgatgtt gaggcagatg atcgtgccga gcaggaagcc gaccagcgtg
     3541 ccgaccacac cgatcgaggc gccggtgatg agaaagacgc gcatgatcgc gccctgcgtg
     3601 gcgcccatgg tgcgcagaat ggcgatgtcg ctgcctttgt ccttcaccag catgatcagg
     3661 ccggacacga tattgagcgc cgccaccagc acgatcagcg tcaggatcaa gaacatcacg
     3721 ttgcgttcga cctgcagtgc attgaaaaag gtggcgttgc gctggcgcca gtcgatcatg
     3781 tagatcggcc gcgccgcggc ggtagccacg agcgcccggt agcggtcgac ccggtccgga
     3841 tcgtcggtat agacctcgat cgcggtcacg tcgccggcgc gattgaaata ggcctgcgcc
     3901 tcggtcagcg gcatgaagac gaaagatgcg tcgtactccg acatgccgat ctcgaagacg
     3961 gccgcgatct tgtaggcctt gatgcgcggc gtggtgccca tcggcgtcac cgcgccgcgc
     4021 ggcgccacga gcgtgagatt gtcgccggcg cgcagcgaca gctgctcggc gagacggctg
     4081 ccgatggcga tgccctgcga ctggtcgaag ccttcgagcg tgccctgctt gatgtttcgg
     4141 gccaccgagg tgagcttttc gaggtcgctc gcgcgcacgc cgcgcaccag gacgccggag
     4201 gcgttgaacg gcgacgacgc cagcgcctgt ccctcaacga tcggcgccgc caggcgcacg
     4261 ccgttgagct tggcgacgcg gtcggccacg gcatcccagt cggtcagcgg cgattcgagc
     4321 ggctggatga gcaggtggcc gttgaggccg agaatctttt ccagaagctc ctggcggaac
     4381 ccgttcatca ccgccatcac gatgatgagc gtggcgacac cgagcatgat gccgagaaag
     4441 gagaagccgg cgatgaccga gatgaatcct tccctgcgcc gcgcccgcag atagcgcagc
     4501 gacagcatcc attcgaacgg cgcgaacgga tgggtgccgg acggctgtgg catcaacgtg
     4561 tggtccccac ggatacccga gtttcacacg attctggcgg
//
LOCUS       DATMQB010000252         2713 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3189342, whole genome shotgun sequence.
ACCESSION   DATMQB010000252 DATMQB010000000
VERSION     DATMQB010000252.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2713)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2713)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2713
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3189342"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(159..1415)
                     /locus_tag="VNY79_07555"
     CDS             complement(159..1415)
                     /locus_tag="VNY79_07555"
                     /inference="COORDINATES: protein motif:HMM:NF015445.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRAP transporter substrate-binding protein"
                     /protein_id="HWX72337.1"
                     /translation="MRVARRSFLASIIGCAAAAPALLPRRVQADAPQLTLKMHHSFSS
                     VSGVHDRFLVPWARKVEADSGGHIRIDIYPLMQLGGAPAQLFDQARDGLADIVWTVPS
                     HTPGRFPKIEAFELPFVPASRALVSSKAIEDYAAANLADEFREVRPLCFSCRDRAVVH
                     ATRTLQGFEELRGLKLHVPNRLADEAVRALGGQAVAMPISQVLLALSGRVINGCLDPW
                     DAAPGLKLYDVLKAHTDFADAALSTTAFVLAMNRGAYDRLPRPLKSVIDANSGQPAAG
                     MAGAMWDVEAAGAVALARERGDAVTVLPPKEVLRWRRATEPVIAAWVKQMKERRIDGD
                     KLLADIRELLEKYAGEPEPQPQPPPRPSPQPAPEQKVVAQPQPRPEAKVEPPRAAAPA
                     PAPAATPAAKPPPAAASRPKELDIPL"
     gene            complement(1455..2357)
                     /locus_tag="VNY79_07560"
     CDS             complement(1455..2357)
                     /locus_tag="VNY79_07560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylcholine/phosphatidylserine synthase"
                     /protein_id="HWX72338.1"
                     /translation="MAMHQPRFDRPRLPKLKRRRFRRIPVRTLAPNVVTLLALCAGLT
                     AIRMAFENHYVLALGAIVFAAILDGIDGRLARFLKGTSRFGAELDSLADFVNFGVAPA
                     LILYFWGLHDLKSAGWIAAMVFAICAGLRLARFNVMSDDPDRPAWASNFFVGVPAPAG
                     AITVLLPIYAAFLGLPRSNFLTWLTLGYTLAVACLMASRLPVFSGKRIGNRVPPDMVG
                     PLVIVMVLFVALLIAYPWVILTAGTLAYLASLPFGWLSYRAYERRSREGKAEAAPAGT
                     GNAPVAASIVPSQSENEDRPSRLN"
     gene            complement(2449..>2713)
                     /locus_tag="VNY79_07565"
     CDS             complement(2449..>2713)
                     /locus_tag="VNY79_07565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HWX72339.1"
                     /translation="IVTATGVRFAVVQIAGLVARRIVPFVREGAAIGAGQRIGMIRFG
                     SRVDVYLPDGAQPLVHEGQTAIAGETVLAEFKAAEAGRAFRAS"
BASE COUNT          462 a          906 c          933 g          412 t
ORIGIN      
        1 cggccgcatc aaggcgctgc ccggttggac gcatccctac gagctgatgc ccggctatcc
       61 gctgccgaaa tgatccttgt tgcgtcgctc aaggggtgag tagggtgcgc gaccgcaagg
      121 tcgcgccgct tggcggtatc ccagttgcca cgtgatcgct acagcggaat atcgagctcc
      181 ttcggccgcg acgcggccgc cggcggaggt ttggcggccg gcgtagcggc tggggcgggg
      241 gccggggctg cggctcttgg cggctcgacc ttggcttccg ggcgcggctg cggttgcgca
      301 acgacctttt gctcgggtgc cggctgcggc gacggccgcg gtggcggctg cggctgcggc
      361 tccggttcgc ccgcatactt ttccaacagc tcgcgaatat cggcgaggag cttgtcgccg
      421 tcgatccggc gctctttcat ctgcttcacc cacgccgcga tcaccggctc ggtggctctg
      481 cgccagcgca aaacttcctt gggcgggagc accgtgaccg cgtcgccgcg ctcgcgcgcc
      541 agggccacgg ctccggcggc ttcaacgtcc cacatggcgc cggccatgcc cgccgccggt
      601 tgacccgaat tggcgtcgat caccgacttc agcgggcgcg gcagacggtc gtaggccccc
      661 cggttcatgg ccagcacgaa cgccgtcgtg ctcagcgcgg catcggcaaa atcggtatgc
      721 gccttgagca cgtcataaag cttcagcccc ggcgctgcgt cccaggggtc gaggcagccg
      781 ttgatcacgc gccccgagag cgcgaggagc acctgggaga tcggcatggc gacggcctgc
      841 ccgccgagcg cacgcaccgc ctcgtcggca aggcggtttg gcacatggag cttgaggccc
      901 ctgagctcct cgaaaccctg caaggtgcgg gtcgcgtgca cgacggcgcg atcgcggcag
      961 gagaagcaca acggacggac ttcgcgaaac tcgtccgcca ggtttgcggc ggcgtagtcc
     1021 tcgatcgcct tcgaactgac cagcgctcgg cttgccggca cgaacggcag ttcgaacgct
     1081 tcgattttgg gaaagcggcc gggcgtgtgg ctcggcactg tccacacgat atcggccaag
     1141 ccgtcgcgcg cctggtcgaa aagctgcgcg ggggcgccgc caagctgcat caaaggataa
     1201 atgtcgatgc ggatatggcc accggaatcc gcctcgacct tgcgtgccca gggcacgaga
     1261 aaccggtcgt gcacgcccga taccgaagag aaggagtgat gcattttgag cgtgagctgc
     1321 ggcgcgtccg cctgcactcg gcgcggcagc agcgctggag ccgccgctgc gcaaccgatg
     1381 atcgaggcca ggaagctgcg gcgggcaacg cgcatactca tccctcgccg ccaatcgaag
     1441 gccggcgata cggctcaatt gaggcgcgac ggacggtctt cgttctcaga ctgggacggc
     1501 acgatgctcg cggcgaccgg cgcgttgccg gtgccagccg gcgccgcttc cgccttgccc
     1561 tcgcgcgagc gtcgctcgta ggcgcggtac gacagccacc cgaacggcaa gctcgcgagg
     1621 taggcgagcg tcccggcggt gaggatcacc cacggatagg cgatgagcag cgcgacgaac
     1681 agcaccatca cgatgaccag cgggccgacc atgtccggcg gcacgcgatt cccgatgcgc
     1741 ttgccggaga agaccggcag ccgcgaagcc atcagacaag ccacggcgag cgtgtagccg
     1801 agagtgagcc aggtcaggaa attcgagcgt ggaaggccga ggaaagcggc atagatcggc
     1861 agcagcaccg tgatggcgcc cgccggcgcc ggcacgccga cgaagaagtt gctggcccag
     1921 gcgggccggt ccggatcgtc gctcattacg ttgaagcgcg cgagccgcaa cccggcgcag
     1981 atggcgaaca ccatggcggc gatccagccg gcagatttga ggtcgtgcag gccccagaaa
     2041 taaaggatca gcgccggggc aacgccgaag ttgacgaagt cggcgaggct gtcgagttcg
     2101 gcgccaaagc gcgaggtccc cttgaggaac cgcgctaagc gcccatcaat gccgtcgagg
     2161 atcgcggcga atacgattgc gccgagggcc agcacgtagt gattctcgaa cgccatgcgg
     2221 atcgcggtca gccccgcaca cagcgcgagc agcgtgacga cgttgggcgc cagcgtgcgc
     2281 accggaatgc gccggaagcg ccgccgcttc agcttcggca gtcggggccg gtcaaaccgc
     2341 ggctggtgca tggccatgat cgacaatata gccccttccg gctacgcgcg ccacgcgcca
     2401 cgctttcgcg gcgttaactt tgctttgttc tgctttgctt tgctttgctc agctcgcacg
     2461 aaacgcgcgg cccgcctctg ctgctttgaa ctctgcgagc accgtttcgc cggcaatggc
     2521 ggtctgtccc tcgtggacca gcggctgcgc cccgtccggc aggtaaacgt cgacgcgcga
     2581 gccgaagcga atcatgccga tgcgttgccc ggcgccgatc gccgcaccct cccgtacgaa
     2641 cggcacgatg cggcgcgcca cgaggccggc gatctggacg acggcgaagc gcacgccggt
     2701 cgcggtcaca atg
//
LOCUS       DATMQB010000253         2925 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1634504, whole genome shotgun sequence.
ACCESSION   DATMQB010000253 DATMQB010000000
VERSION     DATMQB010000253.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2925)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2925)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2925
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1634504"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..887)
                     /gene="miaA"
                     /locus_tag="VNY79_07570"
     CDS             complement(<1..887)
                     /gene="miaA"
                     /locus_tag="VNY79_07570"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0052381 - tRNA dimethylallyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HWX72340.1"
                     /translation="MSKPGIILIAGPTASGKSALALALAEQYGGTIINADSMQVYRDL
                     RIITARPTAAEEERAPHRLYGHVDAGENFSVGRWCREAAAALAAARRDASHAIIVGGT
                     GLYFSALTRGLAAVPAIPATVRAEVRERLARDGAPALHAELSRRDPAAAARLTPGDRT
                     RVTRALEVVLATGRPLKDWQDDEAPAILDISRAAKIFLMPDREELLRRIDARFDAMIA
                     AGALEEVRALAARRLDPELPAMKAHGVPWLIRHLKGEMTLTQAAVEAKRDTRQYTKRQ
                     ATWFRNQLPEFAWVEPQNAL"
     gene            1041..1301
                     /locus_tag="VNY79_07575"
     CDS             1041..1301
                     /locus_tag="VNY79_07575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015916927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antitoxin"
                     /protein_id="HWX72341.1"
                     /translation="MPHAARLRKVGGSVMLAIPKPLLDALHLAPDASVDLSIKAGRLV
                     VDPKTRRRHSLDELLAQCKSSARLSREDRAWLRGPRAGRELI"
     gene            1301..1633
                     /locus_tag="VNY79_07580"
     CDS             1301..1633
                     /locus_tag="VNY79_07580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015397462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HWX72342.1"
                     /translation="MERGDVYLVLLDPTVGHEQQGKRPVLVISPGKFNRLTRMPVVLP
                     ITTGGDFARTAGFAVSLMGAGTRTTGVVRCDQPRALDLRARGAKRLETAPGHIIDEVL
                     SKVGTLFE"
     gene            1669..2925
                     /locus_tag="VNY79_07585"
     CDS             1669..2925
                     /locus_tag="VNY79_07585"
                     /inference="COORDINATES: protein motif:HMM:NF018004.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1015 family protein"
                     /protein_id="HWX72343.1"
                     /translation="MIKPFRALRPAPGRAAEVLAPPYDVLSSAEARARAKARPWSFLH
                     VSKAEIDLDPATDPYDRAVYAKAAENLQHMIVAGVLRRDERPFYYAYRLTWQHQGKQQ
                     VETGLAAVASLSAYAENRIRRHEHTTPPKEHDRVRQIEAVNAQTGPVMLAYPAAAALD
                     ALLERAAASRAAIDVTADDGVRHQLWVIHDAQTIAALTRAVEALPALYIADGHHRAAA
                     AFRVAEARGGGAGGADGSGYFLAVLLPENQMTILDYNRVLRDLNGRSAAELLAEIRRR
                     CTVEPSDRPVRPMHAQEFGMVLAGRWYRLQVRPADRAEPGEAHDAGPVARLPVTLLAR
                     TIIEPLFGITDPRTDQRIDFVGGGRGLAELERLVTSGEMAAAFALYPTQMRDLMAVAD
                     AGAVMPPKSTWFEPKLADGMVSHVLD"
BASE COUNT          461 a         1017 c          971 g          476 t
ORIGIN      
        1 agcgcgttct gcggctcgac ccaggcaaac tccggaagct ggttgcggaa ccaggtcgcc
       61 tgccgcttgg tgtattggcg cgtgtcgcgc ttcgcctcta ccgctgcctg cgtcagtgtc
      121 atttccccct tgaggtggcg gatgagccag ggcacgccat gcgctttcat ggccggcaat
      181 tcgggatcaa gacggcgcgc agcgagtgcg cgcacctctt cgagggcgcc cgccgcgatc
      241 atggcgtcga agcgcgcatc gatgcggcgc aaaagctcct cacggtccgg catgaggaag
      301 atctttgccg cacgggagat gtcgaggatc gccggcgcct cgtcgtcctg ccaatccttg
      361 agcggacggc ccgtcgccag caccacttcc agcgcgcgcg tgacgcgcgt gcggtcgccg
      421 ggcgtcagcc gcgccgccgc cgcgggatcg cgccggctaa gctccgcgtg aagcgcgggg
      481 gcgccgtcgc gagcgagccg ctcgcgtacc tccgcgcgga ctgtcgccgg tatcgccggc
      541 acggcggcta gcccgcgggt gagcgcactg aagtagaggc cggtgccgcc gacgatgatg
      601 gcgtggctcg cgtcacgtcg cgccgccgcg agcgccgcgg cggcctcccg gcaccagcgg
      661 ccgacggaaa agttttcccc cgcgtcgaca tggccgtaga gccggtgcgg cgctcgttcc
      721 tcctcggccg ctgtcggccg ggcggtgatg atgcgcaggt cgcgatacac ctgcatggaa
      781 tcggcattga tgatcgtgcc gccgtattgc tccgcgagcg cgagcgccag cgccgacttg
      841 ccgcttgcgg tcggtccggc aatgaggatg atgcccggtt tactcacgtg gttgacgtag
      901 cgcctgtttt cgccaagtaa acaccctgca cgggagcagg aacgaattgg tgcctgcatc
      961 aacggatagg tggccgactc tccttgccgg tcgggcgcgg ctcagttata tccgaatata
     1021 actgaaagga ggcctgcgcc atgccacacg cggcgcgact gcgcaaagtc gggggctcgg
     1081 tcatgctagc gatccccaag ccgttgctcg acgcgctcca ccttgccccg gacgcctccg
     1141 tcgacctttc gatcaaagcg ggacgcctgg tcgtcgatcc aaagacgcgc cggcgccatt
     1201 cgctcgatga attgctcgcc caatgcaaat cttcggcgcg tctgtcgcgc gaggatcgcg
     1261 cttggctgcg ggggcctcgg gccggtcgcg agctcatctg atggagcgcg gcgacgtcta
     1321 tctcgtcttg cttgatccga cggtcggcca tgaacaacaa ggaaagcggc ccgtgctggt
     1381 catatcgccg ggcaaattca accgtctaac ccgaatgccg gtcgtgctgc cgattaccac
     1441 cggcggcgat tttgcccgca ccgcaggttt cgccgtatcg cttatgggcg cagggactcg
     1501 gacgaccggc gtcgtgcgtt gcgatcagcc acgcgccctc gatttgaggg cgcgcggggc
     1561 caagaggttg gaaacggccc ccgggcacat catcgacgag gtcctgagca aggtcggtac
     1621 actgttcgaa tagggccagc gttcgcaacg gagcaaatcc aggtgtcctt gataaagccc
     1681 ttccgcgcgc tgcggccggc gcccggccgc gctgcggaag ttctcgcgcc gccctatgac
     1741 gtgctgtcga gcgcggaagc gcgcgcgcgc gccaaggcca ggccgtggag ctttctccat
     1801 gtctccaagg cggagatcga tctcgatccc gcgaccgatc cctatgatcg cgcggtgtac
     1861 gcgaaggccg ccgagaatct gcagcacatg attgtggccg gcgtactccg gcgcgacgag
     1921 cggccgttct actacgccta ccggctgacc tggcaacacc agggtaaaca acaggtcgag
     1981 accggcctgg cggcggtcgc ttcgctttca gcctacgccg aaaaccgcat ccgcaggcac
     2041 gagcatacga cgccgcccaa ggaacacgac cgcgtgcgcc agatcgaggc ggtgaatgcg
     2101 cagaccggcc cggtcatgct cgcctatcct gccgccgccg cgctcgacgc cctgctcgag
     2161 cgcgccgccg ccagccgcgc cgccatcgat gtgaccgcgg acgacggcgt gcgccaccag
     2221 ctctgggtca ttcacgacgc gcagacgatc gcggctctca cgcgcgcggt cgaagctctg
     2281 ccggcgcttt acatcgccga tggtcaccac cgtgccgcgg cggcgttccg ggtggccgag
     2341 gcgcgcggcg gaggtgcggg cggtgccgat ggcagcggct attttctcgc tgtcctcctg
     2401 ccggaaaacc agatgaccat cctcgactac aaccgtgtgc tgcgcgattt gaacggccgc
     2461 agcgcggccg agcttctcgc cgaaatccgc agacgctgca cagtcgagcc gagcgaccgg
     2521 ccagtgcgcc cgatgcacgc gcaagagttc ggcatggtgc tcgccggacg atggtatcgc
     2581 ctccaagtcc gccccgccga ccgcgccgag ccaggcgagg cgcacgacgc cggtccggtc
     2641 gcccggctgc cggtcacgct gctcgcccgg accatcatcg agccgctctt cggcatcacc
     2701 gatccgcgca ccgaccagcg catcgacttc gtcggcggcg gccgcggcct tgccgaactc
     2761 gagcggctcg tcacctccgg cgagatggcg gcggcgttcg cgctctaccc gacgcagatg
     2821 cgcgacctta tggcggtcgc cgacgccggc gccgtcatgc cgccgaaatc cacctggttc
     2881 gagccgaagc tcgccgacgg catggtcagc cacgtgctgg attga
//
LOCUS       DATMQB010000254         3064 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1332850, whole genome shotgun sequence.
ACCESSION   DATMQB010000254 DATMQB010000000
VERSION     DATMQB010000254.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3064)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3064)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3064
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1332850"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..264)
                     /locus_tag="VNY79_07590"
     CDS             complement(13..264)
                     /locus_tag="VNY79_07590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72344.1"
                     /translation="MPRRVTLRVQSPLPLGDVTMVPAMLSGQPEAAMARAMAAALADV
                     EAPTAAEVYRRLRQSFPLAPLSARVAALGVLMERLRRAF"
     gene            complement(426..2225)
                     /locus_tag="VNY79_07595"
     CDS             complement(426..2225)
                     /locus_tag="VNY79_07595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX72345.1"
                     /translation="MKAFPAGLSDHSSTFAMVRRLLADEALQHWRRYAVAFMLMGIAA
                     AGTALSAYLLGTMTNEAYVNRNYHGIVVIGFIAAAIFAVKGLATYGAAVMLSSIGNRI
                     IADNQRRMLDKLLRQNMAFFADRHSSEFIARLTTGATAVSHVINLLVTAFGRDLMSLL
                     GLSLVMVIQDPVMSLMGFIMAPPALFFLRKLIRRVRSIARMQFTGGTRIIETMQEALQ
                     GMPLVKAFGLEDEMRRRLAKSVAEVEHESNKMARAANRASPLMETLGGFTIALATIYG
                     GYRVIETGATPGEFVSFLAAFLLAYEPAKRLARLNIDLNNNLVGVRVLYEVIDSPSGE
                     PSDDGLPPLKLTTARLEFADVHFAYHAGTPVLRGMSFVAQPGKLTALVGPSGGGKSTV
                     LSLILRFYDADAGSILIDGQDIATVSRRSLREETAYVGQIVHLFRGTIRENIALGRLD
                     ASEAEIVAAAKAAHAHDFILALPAGYDAQVGEHGLQLSGGQRQRIAVARALIKDAPII
                     LLDEATAALDSESERHVQEAIAELCKGRTTIVIAHRLSTIMHADCILVVESGLIVESG
                     RHDELLRKGGRYASFYRLQLKEQAPAREPAAVG"
     gene            complement(2327..>3064)
                     /gene="galE"
                     /locus_tag="VNY79_07600"
     CDS             complement(2327..>3064)
                     /gene="galE"
                     /locus_tag="VNY79_07600"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003978 - UDP-glucose 4-epimerase activity
                     [Evidence IEA];
                     GO_process: GO:0006012 - galactose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HWX72346.1"
                     /translation="NNGVRHFIFSSTAAVYGNPTEIPVKEESLTQPISPYGWSKLMSE
                     TMLRDAGRAHDLRYVILRYFNVAGADPNGRCGQSSEDATHLIKVAVETALDLRPKLQV
                     FGTDYPTPDGTCVRDYIHVTDLVRAHSDALRHLRSGGQSLTLNCGYGHGFSVREVIEA
                     VKRASGVDFKVEMAPRRAGDPAQIVADCRQVRSTLGWQPRFDDLSVIVAHALAWERAL
                     MQRRAARTDRRQQRETAPAAPAGSTPR"
BASE COUNT          527 a          980 c         1063 g          494 t
ORIGIN      
        1 ctttagggca ggtcagaagg cgcgccgcag gcgctccatg aggacgccga gcgccgccac
       61 gcgcgcgctc aacggcgcca gcggaaacga ctgccgcagc cgacgataga cctcggccgc
      121 ggtcggcgct tcgacatcgg caagggccgc ggccatcgcg cgggccatgg cggcctcggg
      181 ctgtccgctc agcattgctg ggaccatggt cacatcgccc aaggggaggg gtgattgcac
      241 gcgcagggtg acacggcgag gcattggcgg ctccactcgg gttgaggtcg cctgccaacg
      301 cgcgaaagct cgtccgagtt ccataagacg aagcaacgag ccgggggcgt gacccgatca
      361 tgggccccct tcggcccatt cgcacgctga catcacgcgc acgacacgga actgtcgtca
      421 gtccgtcatc cgaccgcggc tggctcgcgt gccggcgcct gctccttgag ttgcaggcgg
      481 tagaacgagg cgtagcggcc gcccttgcgc agcaactcgt cgtgccggcc ggactcgacg
      541 atcaatccgc tctcgaccac gagaatgcaa tcggcatgca tgatggtgga gaggcggtgg
      601 gcgatgacga tcgtcgtgcg ccccttgcac aattcggcga tggcctcctg gacgtggcgc
      661 tcggattcgg agtcgagagc cgccgtagcc tcgtcgagca ggatgatcgg cgcatccttg
      721 atcagtgcgc gggcgaccgc gatgcgttgg cgctggccgc cggaaagctg cagtccgtgt
      781 tcgccgacct gcgcatcgta gcccgccggc aaagcgagga tgaagtcatg cgcgtgcgcc
      841 gccttggcgg cggcgacgat ctccgcttcg ctggcgtcga gcctgccgag cgcgatgttc
      901 tcgcggatcg tgccgcggaa caggtgaacg atctgcccga cataagcggt ttcctcgcgc
      961 agcgagcgcc gcgacacggt cgcgatgtcc tgcccgtcga tcaggatgct gccggcatcg
     1021 gcgtcataga agcgcaggat caggctgagc accgtcgatt tgccgccgcc ggagggcccg
     1081 accagggccg tgagcttccc cggttgggcg acgaagctca tgccgcgcag gaccggcgtg
     1141 ccggcgtgat aggcgaaatg cacgtcggca aattcgaggc gcgccgtcgt gagcttgagc
     1201 ggcggcaggc cgtcgtcgct cggctcgccc gatgggctat cgatcacctc gtagaggacg
     1261 cgcacgccga ccaggttgtt gttgaggtcg atgttgagcc gcgccaggcg cttcgccggc
     1321 tcataggcca ggaggaatgc ggccaggaac gacacgaact cgcccggcgt cgcgcccgtc
     1381 tcgatcaccc ggtagccgcc gtagatcgtc gccagcgcga tggtaaagcc gccgagcgtc
     1441 tccatcagcg ggctcgcgcg gttggccgcg cgcgccatct tgttcgactc gtgctcgacc
     1501 tcggcgacgc tctttgccag acgccgccgc atctcgtctt ccaggccgaa cgccttgacc
     1561 aagggcatgc cctggagcgc ctcctgcatc gtctcgatga tgcgcgtgcc gccggtgaac
     1621 tgcatgcgcg cgatgctgcg cacgcggcgg atgagcttgc gcaggaaaaa cagggctggc
     1681 ggcgccatga tgaagcccat gagcgacatc accggatcct ggatcaccat caccagggac
     1741 aatccaagga gcgacatcag atcgcggccg aacgcggtga cgagcagatt gatcacgtgg
     1801 ctcacggccg tggcgccggt agtcagccgg gcgatgaatt cggatgaatg gcggtcggca
     1861 aagaacgcca tgttctgccg cagcagcttg tcgagcatgc gccgctggtt gtcggcaatg
     1921 atgcggttgc cgatcgacga caacatcacc gccgcgccgt aggtcgcgag gcctttgacg
     1981 gcgaagatcg ccgccgcgat gaagccgatg acgacgatgc cgtgatagtt acggttgacg
     2041 taggcctcgt tggtcatcgt gccgaggagg taggcgctca gcgccgtgcc ggcggcagcg
     2101 atccccatca gcatgaatgc gaccgcgtag cgacgccagt gctgcagcgc ctcgtcggcg
     2161 agaagacggc gcaccatagc gaacgtcgaa ctgtgatctg agagtccggc cgggaaagct
     2221 ttcatgcgcg atccgataca tccccgctgc ggccgaaatg cgcggggcgg cgcccccgcc
     2281 gcgttcaatg cccggaaggc gtgggatttt caagcgcttt tggcaatcag cggggtgtgg
     2341 aaccggcggg cgcggcgggc gcggtttcgc gttgctggcg gcgatcggtg cgcgccgcgc
     2401 ggcgttgcat cagcgcgcgt tcccacgcca atgcgtgggc gacgatcacg gaaagatcgt
     2461 cgaaccgcgg ttgccagccg agcgtcgacc gcacctgccg gcagtcggcc acgatctgcg
     2521 ccggatcgcc agcgcgccgc ggcgccatct cgaccttgaa atcgacgccc gaggcgcgtt
     2581 tgaccgcttc gatcacttcg cgcaccgaga agccgtggcc gtagccgcaa ttgagcgtca
     2641 gcgattggcc gccggaacgc aggtgacgca gcgcatcgga atgcgcgcgc acgagatcgg
     2701 tgacgtgaat gtagtcgcgg acgcaagtgc cgtccggcgt cggatagtcg gtgccgaaaa
     2761 cctgcagctt ggggcgcaga tcgagagccg tctcgacggc gaccttgatc agatgcgtgg
     2821 catcctcgct cgattgcccg cagcggccgt tggggtcggc gccggcgacg ttgaaatagc
     2881 gcaggatcac gtagcgcaga tcgtgcgcgc ggccagcgtc gcgcagcatg gtctcgctca
     2941 tcagcttcga ccacccataa ggcgagatcg gctgcgtgag tgactcctcc ttcaccggaa
     3001 tctcggttgg attgccgtag acggcggcgg tcgaggagaa gatgaaatgg cgcacgccgt
     3061 tgtt
//
LOCUS       DATMQB010000255         6256 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3501358, whole genome shotgun sequence.
ACCESSION   DATMQB010000255 DATMQB010000000
VERSION     DATMQB010000255.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6256)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6256)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6256
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3501358"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            133..492
                     /locus_tag="VNY79_07605"
     CDS             133..492
                     /locus_tag="VNY79_07605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72347.1"
                     /translation="MARASTAALLALAIACAPARAEEAAARPARSAAPGATGADASHT
                     CLNPKERRALAENGTVVHLAAAMHALKNRVSGTLVRARLCRRSEGLVYVLTVLGHDGK
                     VARAVVDAVKGTLVGGL"
     gene            505..1173
                     /locus_tag="VNY79_07610"
     CDS             505..1173
                     /locus_tag="VNY79_07610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009797358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HWX72348.1"
                     /translation="MRLLVVEDDPDLNRQLATALTDAGYVVDRAFDGEEGHYLGESEP
                     YDAVILDIGLPKMDGISVLESWRRAGRAMPVLILTARDRWSDKVQGFDAGADDYVAKP
                     FHLEEVLARVRALLRRSAGHAKSEFTCGPVRLDTRTGRVSVDGSPVKLTSHEYRLLSY
                     LMHHTGRVVSRTELVEHLYDQDFDRDSNTIEVFVGRIRKKLGVDVIQTVRGLGYLLTP
                     PDAR"
     gene            1163..2539
                     /locus_tag="VNY79_07615"
     CDS             1163..2539
                     /locus_tag="VNY79_07615"
                     /EC_number="2.7.13.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_function: GO:0004673 - protein histidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HWX72349.1"
                     /translation="MRVSSLALRLFLWATGWTVVILIVTGIVLSTLYRNAVERAFDRR
                     LDVYLRTLVADVASPEEGTDKFPQSIGEPLFDLPLSGWYWQVARLDTAKPEVHSSRSL
                     WDSNFPRLADGGQGSAASGGYRQGYAQGPEDVRLRLAERTVDLGEDGHYLVAVAGDAT
                     EIDNEMRSFDRVIGATFGALAIALLLTTALQVRFGLLPLKRISASLAAIRSGRAERLQ
                     GEFPVEIAPLARETNALIDANREIVERARTHVGNLAHALKTPLSVLVNEAAARADDPL
                     AQKVRKQTDIMRDQVARQLERARLAARSTVVGALIDVSPVVTALARTMEKLHRERDIA
                     IAVDVPEQARFPGEQHDLEEMIGNLVDNACKWAQSRIAIEVVADRFEGDGKPRVRIIV
                     DDDGPGLSPSEREQVALRGRRLDESKPGSGLGLSIVVELAGLYGGVLSLGTAPIGGLR
                     AELALPGA"
     gene            2662..3135
                     /locus_tag="VNY79_07620"
     CDS             2662..3135
                     /locus_tag="VNY79_07620"
                     /inference="COORDINATES: protein motif:HMM:NF028308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RT0821/Lpp0805 family surface protein"
                     /protein_id="HWX72350.1"
                     /translation="MPALRFVALALFGLSLAACSTDSGPKEIGGTAAGAVAGGAIGNA
                     VGGSTGNRVSGTVIGAAVGAFIGNRIGAALDDDDKRRAYTAQMQALESGPSGAPVAWR
                     NPDSGRYGNVVPGPAYQTNGGYCRQYTHTVYIDAKPQIERGTACRKPDGSWSTVS"
     gene            3253..4692
                     /locus_tag="VNY79_07625"
     CDS             3253..4692
                     /locus_tag="VNY79_07625"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72351.1"
                     /translation="MTSDGQSVERLRDYLRTLKPEARAMLVTELERGVLRGDEAAGNE
                     FVLQELRRTIRAAGQAVPRIGDAARLFFAPLEPFLIDDGADHKRVGRLARVSLEPIWE
                     WIGRDLMPAEAKALSDDINRALVADDGVKAELLTRALHERAIQRIKETIDAAGADEKM
                     RRRLVVQVGTPRAFEDVDSLLRILVLRDVLGDLARRRLPKHLRTFEREQIDQVKALVE
                     AAAAQKSPDLAARKTDIFVCGLVLVMGRLALPWQLIRLATRAAESDDAARVAETPFAN
                     AVAIVLSEIECMVSESRVELKARRPATSLLKGIHDAARGLRTEMDLSVDSPWSRQLAA
                     IRTDISALLKAEIESTPGRVRRLLRPRPPNEIAPGALLDAIDVSDTEMLVEFVDACRS
                     YANELAVNEVTARTWLELQHYLETADKGLLDALRQAGAADRPFRQSQAEAAIRFCRTV
                     FGADYAGLLAKAAEIAVQTGTVERKSVRA"
     gene            4804..5931
                     /gene="ccmI"
                     /locus_tag="VNY79_07630"
     CDS             4804..5931
                     /gene="ccmI"
                     /locus_tag="VNY79_07630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="c-type cytochrome biogenesis protein CcmI"
                     /protein_id="HWX72352.1"
                     /translation="MTLWFIFGLMTAAALFAVLWPLGRYPRAAPGGSDLMVYKDQLQE
                     IDRDRAAGLIGEAEAEAARLEVSRRLLAAADTQPPNAGEAPAAAAAPQRRRRAAAIAA
                     LVILPLGPAGLYMAVGSPDVPAQPAFARVKKPQGQESIATLVSQVEDHLARNPADGAG
                     WELIAPVYMRLGRFGDAVEARRKALTLNGASAVREADLGEALAAAADGVVTAEAKLAF
                     ERALAHDAREAKARYFLGVAEEQDGKNDQAASTWRALLADAPADAPWAAFVREALARV
                     SGTPAREAGPSAGDVAAAASMSDEERREMVRGMVARLADRLHDNGADVEGWLRLVRAY
                     VVLGDRDKAKDAAAEAKRALVDRPDELQRVNELVKTLDIEG"
     gene            6056..>6256
                     /locus_tag="VNY79_07635"
     CDS             6056..>6256
                     /locus_tag="VNY79_07635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0020037 - heme binding [Evidence IEA];
                     GO_process: GO:0017003 - protein-heme linkage [Evidence
                     IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c maturation protein CcmE"
                     /protein_id="HWX72353.1"
                     /translation="MTRKQRRLVLIGGAVGVLAVAVALVLGALRDSIVFFNSPSDVVE
                     KHVAPGARIRLGGLVKDGSVVRG"
BASE COUNT          966 a         2136 c         2138 g         1016 t
ORIGIN      
        1 catcggcgag cctcgtcctt atcgcgccga cccacgtgcc catgccgtct ccgcgacttg
       61 gccgggcgcc ggtttacgcg gccgttcagg cgcggttcac cccggagagc ctagggagga
      121 cgcatgcctg ccgtggcacg agcgtccact gccgcgctgc tcgcgcttgc gatcgcgtgc
      181 gcgccggcgc gcgcggagga ggcggccgcc cgcccggccc gttcagccgc tccgggcgcc
      241 actggggccg acgcttccca cacctgcctc aatccaaagg agcgacgggc tctggccgaa
      301 aacggcactg tcgtgcacct cgccgctgcc atgcacgcgc tcaagaaccg cgtgagcgga
      361 acgctggtgc gggcgcgcct ctgccgccgc tccgagggac tcgtctacgt gctgacagtt
      421 ctcggccacg atggcaaagt agcgcgagcc gtcgtcgatg cggtgaaggg cacgcttgtc
      481 ggcggcctct gagcggagca ctgcgtgcgc cttctcgtcg tcgaggacga tccggatctc
      541 aatcggcagc ttgccaccgc gctgaccgac gccggctacg ttgtcgatcg ggctttcgac
      601 ggcgaggagg gccactatct cggcgagagc gagccgtacg acgctgtcat cctcgacatc
      661 ggtctgccga aaatggacgg catctcggtg ctggaatcct ggcgcagggc aggccgtgcc
      721 atgccggtcc tcattctcac cgcgcgcgac cgctggagcg acaaagtgca gggatttgac
      781 gccggcgcgg acgactacgt cgccaagcca tttcacctcg aagaggtttt ggcgcgagtg
      841 cgcgcgctgc tgcgccgctc ggccggccac gccaagagcg agttcacctg cgggccggtg
      901 cgcctggata cccgcaccgg gcgggtcagc gtcgatggga gtccggtcaa gctgacctcg
      961 cacgaatacc ggctcctgtc ctacctcatg caccataccg gacgcgtcgt gtcccgcaca
     1021 gagttggtcg agcacctcta cgatcaggat ttcgaccgcg actccaatac catcgaggtt
     1081 ttcgtcggcc gcatccgcaa gaagctcggc gtggacgtga tccagacggt gcgcggtctc
     1141 ggctatttgc tcacgccgcc cgatgcgcgt tagctcgctc gcgctccgcc tgttcctgtg
     1201 ggcgaccggc tggacggtgg tcatcctcat cgtcaccggg atcgtgctgt cgacgctcta
     1261 ccgcaacgcc gtggaacgcg ccttcgatcg gcggctcgac gtctatttgc gtacgctggt
     1321 cgccgacgtg gcctcgcccg aggaaggcac cgacaagttc ccgcaatcga tcggcgagcc
     1381 cctgttcgat ctgcctctgt caggctggta ttggcaggtc gcccggctcg ataccgcaaa
     1441 gccggaggtc cattcctcgc gctcgttgtg ggattcgaac ttcccgcgcc tggccgacgg
     1501 cggccagggt tccgcagcct ccggcggata ccggcagggc tatgcccaag gaccggagga
     1561 cgtgcggctg cgtctcgccg agcgcaccgt cgatctcggc gaagatggcc actatctggt
     1621 cgccgttgcc ggcgatgcca ccgagatcga caacgagatg cgcagtttcg accgcgtcat
     1681 cggtgcgacc ttcggcgcac tcgccatcgc gctgcttctg acgacggcgt tgcaggtgcg
     1741 cttcggtctg ttgccattga agcgcatctc cgcgagcctg gcggcgatcc gctcgggccg
     1801 cgccgagcgg ctacagggcg aattcccggt cgagatcgcg ccgcttgcgc gggaaaccaa
     1861 tgcgctcatc gacgccaatc gcgagatcgt cgagcgcgca cgcacgcatg tcggcaatct
     1921 cgcgcacgcg ctgaagactc cgctttccgt tctcgtcaac gaggcggccg cgcgcgcgga
     1981 cgatcccttg gcgcagaagg tgcgcaagca gaccgacatc atgcgcgatc aggtcgcgcg
     2041 ccagctcgag cgcgcccggc ttgccgcccg ctccaccgtg gtcggcgcgc tgatcgacgt
     2101 atcgccagtc gtcaccgcgc tcgcccgcac gatggagaag ctccatcgcg aacgcgacat
     2161 cgccattgcc gtcgacgtgc cggagcaggc gcgctttccc ggcgaacagc acgacctcga
     2221 ggagatgatc ggcaacctcg tcgacaatgc ctgcaagtgg gcgcagtcgc ggatcgccat
     2281 cgaagtggtc gccgaccgtt tcgagggcga cggcaagccg cgcgtgcgca tcattgtcga
     2341 cgacgacggg ccgggccttt ctccttccga gcgcgagcag gtggcgttgc gcgggcgccg
     2401 gctggacgag agcaagcccg ggtccggcct tggcctgtcc atcgtcgtcg agcttgccgg
     2461 cctttatggc ggggtcctgt cgctcggaac cgcgccgatt ggcggcctgc gtgccgaact
     2521 cgctctgccg ggagcgtgac gatccctgcg cgtgcctccg tttgcgcccc accgggacag
     2581 agtttcgccc cattcgtgcc gtgtgctggt cgcgtcggaa atccgatggc gaggcgccat
     2641 cgggggcgtg tcgggggcca catgccggca ctcaggttcg ttgcgttagc gctctttgga
     2701 ttaagcctcg cagcctgttc taccgattcc gggccgaaag agatcggcgg cacggcggcc
     2761 ggtgcggtgg ctggcggcgc gattggcaat gcggtcggcg gcagcaccgg caatcgagtc
     2821 tctggtaccg tgattggagc cgcggtcggc gctttcatcg gcaaccgcat cggcgctgcg
     2881 ctcgacgacg acgataagcg ccgggcctac accgcgcaga tgcaggcgct cgagagcggg
     2941 ccctcgggcg caccggtggc gtggcgcaat ccggattccg gacgctacgg caacgttgtc
     3001 cccggccccg cctaccagac caacggcggc tattgccggc agtacaccca cacggtctac
     3061 atcgacgcaa aaccgcagat cgaacgcggc acggcctgcc gcaagccgga cggtagctgg
     3121 tcgaccgtga gttaatcgca gttcgtcgcg acgagctcta tcgccttgaa ttcctgacat
     3181 tttacgtaac gccttcttaa tcgccgggtg actagaaggc atctggcgcc ttccaggtga
     3241 ggtggtgtgg caatgaccag cgacggccag tcggtcgaac ggctgcggga ctatctgcgc
     3301 acgctcaagc ccgaggcgcg ggcgatgctc gtgactgagc tcgagcgcgg cgtgctgcgt
     3361 ggcgacgaag ccgccggcaa cgaatttgtg ctgcaggaat tgcgccgcac catccgcgcc
     3421 gccggacagg ccgtcccgcg cattggtgac gccgcccgcc tgttcttcgc gccgctcgaa
     3481 ccgttcctca tcgacgatgg ggccgaccac aagcgcgtcg gtcggctcgc gcgtgtgtcg
     3541 ctcgaaccga tctgggaatg gatcggccgg gacctgatgc ctgcggaggc caaggcgttg
     3601 tccgacgaca tcaaccgcgc gctggttgcc gatgacgggg tcaaggccga gttgctgacg
     3661 cgcgcgctgc acgaacgggc gatccagcgc atcaaggaaa ccatcgacgc agccggggcc
     3721 gacgaaaaaa tgcgccggcg cctggtcgtg caggtcggca cgccgcgcgc cttcgaggat
     3781 gtcgactcgc tgctgcgcat cctcgtgctg cgcgacgtgc tgggcgactt ggcgcgccgc
     3841 cgcttgccga agcacttgcg caccttcgag cgcgagcaga tcgaccaagt gaaggcgctg
     3901 gtcgaggctg cggcggcgca aaaatcaccg gacctcgccg cgcgcaagac ggatattttt
     3961 gtttgcgggc tggtcctggt catgggcagg ctggcgctcc cctggcagct catccgcctc
     4021 gcgacgcgcg cggcggaaag cgatgatgcg gcgcgtgtcg ccgagacgcc gtttgccaac
     4081 gcggtcgcca tcgtgcttag cgagatcgaa tgcatggtga gcgagtcgcg cgtcgagctc
     4141 aaggcgcgcc gcccggccac ctcgctgctg aagggcattc atgatgccgc gcgcggcttg
     4201 cgcaccgaga tggatctctc ggtcgactcg ccctggagtc gccaacttgc cgcgatccgc
     4261 accgacatct ccgccctgct caaggccgag atcgaatcga cacccgggcg cgtgcggcgc
     4321 ctgttgcggc cgcgaccgcc caatgagatc gcgcccggcg cattgctcga cgcgatcgac
     4381 gtaagcgaca ccgaaatgct ggtcgaattc gtcgatgcct gccgcagcta cgccaacgag
     4441 ctggcggtca acgaagtgac cgcgcgcaca tggcttgaac tgcagcacta cctcgagacc
     4501 gccgacaagg ggctgctcga tgcgctgcgg caggccggcg ccgccgaccg gccgttccgg
     4561 caatcgcagg ccgaagccgc gatccgcttc tgcaggacgg tgttcggcgc ggactatgcc
     4621 gggcttctgg ccaaggcggc cgagattgcg gtgcagactg ggaccgttga gcgcaagtcc
     4681 gtgcgggcct gagcagcgcg caattgccgc gccgcggctc ccattgccgc cgcattgacg
     4741 ccgtgttgta accacgcgcg tcgcaaggga cggcgggctc ccagtatcgg cgaaggaatg
     4801 gcgctgaccc tgtggttcat tttcgggttg atgaccgccg cggcgctgtt cgccgtgctg
     4861 tggccgcttg ggcgctaccc gcgcgccgcg cccggcggca gcgatctcat ggtctacaag
     4921 gatcaattgc aggaaatcga tcgcgatcgc gcggccggcc tgatcggcga ggccgaagcg
     4981 gaagcggcgc gccttgaagt ctcgcgccgg ctcctcgccg cggcggacac gcagccgccg
     5041 aacgccggcg aagcgcctgc tgccgcggcg gcgccgcaac ggcggcgccg cgccgctgcg
     5101 atagcggcat tggtgattct gccgctcggg ccggcgggcc tctacatggc ggtcggctct
     5161 cccgacgtcc ccgcgcagcc cgctttcgcc cgcgtcaaga aaccgcaagg ccaggagtcg
     5221 atcgccaccc tcgtcagcca ggtcgaggac cacctcgccc gcaatcccgc cgatggcgcc
     5281 ggctgggagc tgatcgctcc agtctatatg cggctcggcc gcttcggcga cgcggttgaa
     5341 gcgcgccgca aggcgctgac gctcaacggc gcgagcgcgg tgcgcgaagc cgatctcggc
     5401 gaggcgctgg ccgccgcggc ggacggcgtc gtcaccgcgg aagcgaagct cgcgttcgaa
     5461 cgcgccttgg cgcacgatgc ccgcgaggcc aaggcccgct actttctcgg tgttgccgaa
     5521 gagcaggacg gcaagaacga tcaggcggca tcgacgtggc gcgcgctgct cgccgacgcg
     5581 ccagccgatg cgccgtgggc tgcattcgtg cgcgaggcgc tcgcgcgcgt ttccggcacg
     5641 ccagcccgcg aagccggccc gagcgcgggc gacgtcgccg ccgcggcgag catgagcgac
     5701 gaggagcgcc gcgagatggt ccgcggcatg gtggcgcggc tcgccgatcg cctgcatgac
     5761 aatggtgccg atgtcgaggg atggttgcgc ctcgtgcgtg cctatgtcgt actcggcgac
     5821 cgtgacaaag cgaaagacgc cgctgccgag gcaaagcgcg cgctcgtcga ccggcccgac
     5881 gagctccagc gcgtcaacga gttggtcaag acgcttgata tcgagggctg acgcggttgc
     5941 ggatgatggc cacggacata gaccgcccgt tcccgcgaca gcgggaatcc cgccccgcgg
     6001 gaacggcgtc ggcaacgcgt tcaccgctcg gctgggcgcg agcggaacag cgatcatgac
     6061 acgcaaacag cgacgcctcg ttctgattgg cggcgccgtc ggcgtgttgg ctgttgcggt
     6121 cgccctcgtc ctcggcgcgc tgcgcgattc gatcgtgttc ttcaactcgc cgagcgacgt
     6181 ggttgaaaag cacgtcgcgc ccggagcgcg catccgcctc ggcggcttgg tcaaggacgg
     6241 cagcgtcgtg cgtggc
//
LOCUS       DATMQB010000256        20108 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2258815, whole genome shotgun sequence.
ACCESSION   DATMQB010000256 DATMQB010000000
VERSION     DATMQB010000256.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 20108)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20108)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20108
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2258815"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..2025)
                     /locus_tag="VNY79_07640"
     CDS             complement(34..2025)
                     /locus_tag="VNY79_07640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016866 - intramolecular transferase
                     activity [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl-CoA mutase family protein"
                     /protein_id="HWX72354.1"
                     /translation="MPDQQNRKKARDKPWIFRTYAGHSTAAASNALYRKNLGKGQTGL
                     SVAFDLPTQTGYDSDHPLAKGEVGKVGVPISHLGDMRALFDGIPLGEMNTSMTINATA
                     AWLLALYVALADEQDVPREKLTGTTQNDIIKEYLSRGTYVFPPAPSMRLTKDVILFTT
                     REMPKWNPMNVCSYHLQEAGATPVQELAFALATAIGVLDAVKASGECAGDRFGEVVGR
                     ISFFVNAGLRFVTEICKMRAFTELWDEITRERYGVGDPKQRLFRYGVQVNSLGLTEQQ
                     PENNVARILLEMLAVTLSKGARARAVQLPAWNEALGLPRPWDQQWSLRMQQILAYETD
                     LLEYGDIFDGSPAIAAKVAALKTAAKEELGQIEKMGGTVVAVEQGYLKRQLVESNSRR
                     VEAIERGEQVVIGVNRFVETEDSPLAEAAGAVVTVSEETEAEQIARLKAWRAARNATA
                     VEEALKALRQAARSGANVMAASIACAKAGVTTGEWGFALRAAFGEYRAPTGVGTAMRN
                     DAEGLDDLRAEVDRVSKKLGRRLKLLVGKPGLDGHSNGAEQIAARARDAGMEVVYDGI
                     RLTAEAIAAAAAEKRVHVVGLSILSGSHLPLVHDVMARLKDAGLDDVPVVVGGIIPPQ
                     DASALKAAGVAEVYTPKDFELNRIMAELVRIVEDAVPGE"
     gene            complement(2095..2271)
                     /locus_tag="VNY79_07645"
     CDS             complement(2095..2271)
                     /locus_tag="VNY79_07645"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72355.1"
                     /translation="MTRPDAALHLAGVFGPFGCPTPTREVINPQPLADDDALDSAEAL
                     QTVVARPVLTKYRP"
     gene            2578..5760
                     /locus_tag="VNY79_07650"
     CDS             2578..5760
                     /locus_tag="VNY79_07650"
                     /inference="COORDINATES: protein motif:HMM:NF023324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maltotransferase domain-containing protein"
                     /protein_id="HWX72356.1"
                     /translation="MQFDHVLTGPLFAPGADGNIFLTGDHERVHCAIDGSHDADAFVA
                     GFAETCRQHGLRLLADIVVGRVAPHADVAQSAPGWFHVDEPTSQRVDPRSSLRQPNAA
                     YARFDDPVIAKEVAGWWAERLIRLADRDVAGFRCLDPQLVPANVWRHVIAAVQQKFPH
                     CRFLAWTPGLAWRNVAQLKELGFAGAFSSLPWWDGRASWFVEEHELLRTIGSVIACPE
                     APFGTRLARRFEDAPDQAQVYRHWLRCAVATGDGLMVPMGFEFAVSEDMDDRQTANAG
                     FAPIGAARNLDVTAEIGEANALSEQLSGLGIAGEMRTLTDPAAPVTVLLRSDAPDVRQ
                     ARSPIVVMINPDWQREHPLPVSLDPLPAAAGASLAAEETIAADHESNVLVGGEVRILR
                     ARPTGPIKSRRADLRPAKLAAAPRIVIDSVVPSVEGGRFAAKCVIGEPVTIAADVFID
                     GHELLVVEVLWRAADQKEWRREPMRLLGNDRWQATILPDRIGRYEFTIEAWVDRYGTL
                     CRDVEIKRPAGGDVAVEIAEARHLLEQAKERTQDDAGNVISAALTWLRDASVDASAQI
                     LLTPDLREVMREAEEQLFRCGCEPAFALDVERPQAAFASWYELFPRSATTTSTRHGTL
                     ADVVRRLPALRDMGFDVLYLPPIHPIGNTNRKGKNNSLRAEADDVGSPYAIGSSEGGH
                     TAIHPALGTLDDFRQLRAAAADHGMELALDFAVQCSPDHPWLKEHPEWFSWRPDGSVR
                     YAENPPKKYEDIVNVDFYGGQSIPDLWIALRDIVLFWLNEGVRIFRVDNPHTKPLPFW
                     EWLIAQVRSRNPEVIFLSEAFTRPKMMYRLAKIGFSQSYTYFTWRNSKQEITDYFVEL
                     TTSEVKDYFRPHLFVNTPDINPYFLQTSGRPGFLIRAALAATLSGLWGMYSGFELCEA
                     AALPGREEYLDSEKYEIRVRSRDAPGNIIPEIRKLNRIRKSNPALQTHLGLRFYPAHG
                     NQVILYGKPLLAGDDMILIAVSLDPFHVQEVTIEVPLWEWKLSDSAAVAVTDLMREQK
                     FTWHGKLQRIRLDPAELPFAIWRIAPRPGG"
     gene            5763..9059
                     /gene="treS"
                     /locus_tag="VNY79_07655"
     CDS             5763..9059
                     /gene="treS"
                     /locus_tag="VNY79_07655"
                     /EC_number="5.4.99.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017991416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047471 - maltose
                     alpha-D-glucosyltransferase activity [Evidence IEA];
                     GO_process: GO:0005991 - trehalose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="maltose alpha-D-glucosyltransferase"
                     /protein_id="HWX72357.1"
                     /translation="MDARSVQQTTSAAEQLWYKDAIIYQLHVKSFFDSNDDGIGDFPG
                     LISRLDYIADLGVNAIWLLPFYPSPRLDDGYDISAYRDVHPDYGSLADFRHFVRAAHS
                     RGIRVITEMVINHTSDQHRWFQRARHAKPGSPWRNFYVWSDTDQKYAGTRVIFIDVER
                     SNWTWDPVAGAYYWHRFYSHQPDLNFDNPQVLKAVLSVMRFWLQLGVDGLRLDAVPYL
                     VEREGTSNENLPQTHEILKRLRAEVDAAFPGRMLLAEVNQWPEDTKDYFGEADECHMA
                     FHFPLMPRMYMAIAREDRFPITDIMRQTPAIPESCQWAVFLRNHDELTLEMVTDSERD
                     YLWQTYAADRRARLNLGIRRRLAPLLERDRRRFELMNCLLLSMSGTPVIYYGDEIGMG
                     DNIHLGDRNGVRTPMQWSPDRNGGFSRADPAALVLPPIMDPLYGYGAVNVEAQTRDPH
                     SVLNWTRRMLAVRRRHPALGRGTLTFLYPKNRKILAYLREYAGETILCVANVAHSSQA
                     VELDLSAFAGRVPVELNAGTPFPPIGELTYLLTLPPYGFYWFVLGEASDWPAWHTPAP
                     EPLPEFVTLVLRENLGKVLSTTAEAVIAREILPQYILKRRWFGLKDQSIESTRIAHLT
                     NIGEAGREFLLGEVEVKSGGGASCWLLPLAILWEDEPSAALPNRLALARVRRGRRLGL
                     LTDAFALPGFAHRFVSCLAAGQGFEHADGVVRFQATESGREQLKTKPDAEVNWLAAEQ
                     SNSSLTVGDAVMLKIYRRILPGTHPEAEIGRYLTAQGFAHAPPLLGDVVRIAADGTPF
                     TLAVALGFVRNQGDAWAWILDQLQRAIDGLAAAEPAGDTEADLLADCEAVIAVIGSRL
                     GEMHAVLARETSEAAFAPKIAGAADAAQWGRNVEKRIGTAFDAIGRTRTFEREQDRER
                     ASVLLSQRSDIVAAVHRLAKSGAGTLMTRIHGDFHLGQVLVASGDAYIIDFEGEPAIS
                     IAERRAKTSPLRDVAGLLRSIDYAGATTVERKGVGAMPVDEAQRDHLIAQFRQRASKA
                     FLRCYWEASSNSDGPAARALLDLFLIEKAAYELAYEAANRPTWIGVPLAGLSSLVARI
                     IEKDGGGRHG"
     gene            9052..11262
                     /gene="glgB"
                     /locus_tag="VNY79_07660"
     CDS             9052..11262
                     /gene="glgB"
                     /locus_tag="VNY79_07660"
                     /EC_number="2.4.1.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003844 - 1,4-alpha-glucan branching
                     enzyme activity [Evidence IEA];
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0043169 - cation binding [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0005978 - glycogen biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-alpha-glucan branching protein GlgB"
                     /protein_id="HWX72358.1"
                     /translation="MAEAGLKPVWRLDQQSAHALALGTHDNPFAVLGPHDTREARVIR
                     AFLPGATKVDVVRRSDGAVLATLEPANEPGLFEGLLDERGPYRLRIAWPDAVNETEDP
                     YSFGLLLGDLDLHLFSEGRHFELARCFGAQTVAIDGVNGVRFAVWAPNASRVAVVGDF
                     NSWDRRRHPMRVRHGGGIWELFIPRVAPGSRYKYDIAGPGGIEAAWKADPVARQTEPP
                     PGTASIVPQPDDHRWRDDAWMQSRGQRQAPDAPISIYEVHLSSWLKPRQLAEESSLWD
                     FAVERLVPYLVEMGFTHVELLPIAEYPFGGSWGYQPLSLFAPSGRFGAPQGLSRFVDV
                     LHGAGIGIILDWVPAHFPTDPHGLARFDGTALYEHLDPREGFHQDWNTFIYNFGRREV
                     QGFLIASALYWLEHFHIDGLRVDAVASMLYRDYSRREGEWVPNVHGGRENLEAIGFLR
                     HLNAVIAERCPGAIMVAEESTAWGGVSRPISTGGLGFSYKWNMGWMHDTLDYMAKEPI
                     HRQYHHSEMTFGLLYAFSENFILPLSHDEVVHGKGSLIGKMPGDRWQRFANLRAYFGF
                     MWGHPGKKLLFMGSEFAQEREWNHDRELDWPSIEDPAHAGVQRLVRDLNHLYAAEPAL
                     HRRDCEPSGFMWTVGDDRSNSVFAFLRLGPSPTAPILVVSNMTPVPRRNYRIGVPRGG
                     GWREIFNSDSGYYGGSNVGNEGRVDTALIAAHGHPQSLELMLPPLSTIFLRHDG"
     gene            11266..13374
                     /gene="glgX"
                     /locus_tag="VNY79_07665"
     CDS             11266..13374
                     /gene="glgX"
                     /locus_tag="VNY79_07665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004133 - glycogen debranching enzyme
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycogen debranching protein GlgX"
                     /protein_id="HWX72359.1"
                     /translation="MASLPAQLDRGNPYPLGATWDGLGTNFSVFSAHAERIELCLFDP
                     AGRREIARLDLPECTDEIWHGYLPNARTGLIYGYRAHGPYSPQEGHRFNPHKLLLDPY
                     TRQFAGTLRWSDALFGYRINSPRADLSYDRRDSAQGMLKAVVSDDVFDWGDDRPPNVP
                     WSKTIIYETHLRGMTMLRHDMRANERGTFAALADADVIRYLKSLGVTAVELLPVHAFL
                     QDRTLLEQGLKNYWGYNSIGFFAIEPRYLSDGSRSEMRVAVRRLHAAGIEVILDVVYN
                     HTAEGSEFGPTLSFRGLDNASYYRLVPENRRHYINDTGTGNTLNLSHPRVLQMVMDSL
                     RYWVTSFHVDGFRFDLGVTLGREAHGFDPGSGFFDALRQDPILTRVKLISEPWDLGPG
                     GYQLGHHPPGFAEWNDRFRDSTRRFWRGDAGERPEFAARLAGSSDLFDRQARHPWASV
                     NYAASHDGFTLADILSYSHRHNEANGEDNNDGAGENFSANWGVEGPTPDKSILETRAR
                     IQRAMLATVMFAHGTPMLLGGDEWGRTQGGNNNAYCQDNETSWWDWSRVNSAQGRELR
                     SFAAKLIALRQKHTALRSRHFLHGLRELAPGIFDIAWFEANGGMISEDSWKNPEIRLL
                     CLRRATRNADGTVSILNLLLNPTSEDHFFRLPDPVLPARVLVDSARPEAGEPAVNDNK
                     IDVLSRSAVLVYAWLENPPQ"
     gene            13374..15134
                     /gene="treZ"
                     /locus_tag="VNY79_07670"
     CDS             13374..15134
                     /gene="treZ"
                     /locus_tag="VNY79_07670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016798 - hydrolase activity, acting on
                     glycosyl bonds [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose trehalohydrolase"
                     /protein_id="HWX72360.1"
                     /translation="MRTGWRLPFGANLIGHDRTQFRIWAPAQPTMSVAVEGAAPLPMS
                     RSDDGWFEAEANCGAGARYRYILPDGATVPDPAARAQHGDVRGASIVVDPLSYRWRHP
                     DWRGRPWHEAVLYEAHAGLLGGFAGVARELPRLAALGVTAVELMPVAEFPGGRNWGYD
                     GALLFAPESSYGSPDDLRALIDAAHGHGLMMFLDVVYNHFGPEGNYLARYAPAMFRDD
                     VATPWGPALNFRRREVRRFFTENALYWLLEYRFDGLRFDAVHAIADAGWLDEMAAEVR
                     KSVEPGRHVHLVLENDDNAAAHLARGFDAQWNDDGHHVLHVLLTGESEGYYEDYADRP
                     AERLARCLKEGFIYQGEPSAYRGGKSRGTASADLPPTAFVLFLQNHDQIGNRAFGERL
                     TQLAHPQAHEAAIALLLLCPQIPLLFMGEEGASTSPFLFFTEHAAELAQAVRDGRRRE
                     FAKFSQFSDPKHLDKIPDPNATVTFERSKPVADSARAGARERLYRDLLALRRAEIVPR
                     LAGARAVDARAISSAAVTASWRMGDNSLLTIAVNLGAEAAEIPRHRGRLLFASSDAAA
                     LAAQQGRIGPYSTVAMLEPP"
     gene            15131..17203
                     /gene="malQ"
                     /locus_tag="VNY79_07675"
     CDS             15131..17203
                     /gene="malQ"
                     /locus_tag="VNY79_07675"
                     /EC_number="2.4.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020184338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004134 - 4-alpha-glucanotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0005980 - glycogen catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-alpha-glucanotransferase"
                     /protein_id="HWX72361.1"
                     /translation="MSDAAVREFAGRAGIAVEWRDYANEQHRVSAENLRRILAALQLP
                     CDTAADLAQSRRQLETSRLPPLITATTGHPFEVPAAGKVPDRVRVTYEDGTIAELPVR
                     SALRGVRLPGIETPGYHVIELGAERITVAIAPPRCYTIADITPEERPWGLAVQAYGLR
                     GAGDCGIGDTAGVIALAGKAAGLRADAVALSPVHALFAADPNHFSPYSPSSRLFYNPL
                     HADARTLFGDARVAKAAHDAGVAAAAAELEQQRLIDWRESARAKMSVFRRLFEDFSST
                     DLAARAAMPLAADFAQFRAAGGALLAAHAQFEALHAARFAADGSAWNWRDWSEAWRNP
                     ASAEVTRFAETNASEAAFHCFLQSIADRSFAAAKRATKQSGMRIGLIADLAVGISSAG
                     SEAWTNPNNLLIDLEIGAPPDAFNAKGQSWGLTMFSPRALPAGGFAPFIATLRACLRH
                     SGGLRIDHAMGLQRLWVIPRGAGPNEGAYLGYPTDDLLRLIALESHRHRAIIIGEDLG
                     TVPAGFRDRIGRAGLYGTRVLWFERERNRFAPPQAWPTGVAAMTSTHDLPTVAGWWRG
                     TDIDVRAQCGLVEDPDKERATRTMDRQMLWRACRRAKAAEGDLPAPNETSRAADAAVK
                     FIAQTPSQLALLPLEDALAVEDQPNVPGTIDERPNWRRRYAGQAEELLSPADVRRRLD
                     PLARRGRR"
     gene            17200..19833
                     /gene="treY"
                     /locus_tag="VNY79_07680"
     CDS             17200..19833
                     /gene="treY"
                     /locus_tag="VNY79_07680"
                     /EC_number="5.4.99.15"
                     /inference="COORDINATES: protein motif:HMM:TIGR02401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047470 - (1,4)-alpha-D-glucan
                     1-alpha-D-glucosylmutase activity [Evidence IEA];
                     GO_process: GO:0005992 - trehalose biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malto-oligosyltrehalose synthase"
                     /protein_id="HWX72362.1"
                     /translation="MSAPRATMRLQLHAGFTFADAGALLPYFAAVGVSHLYASPIMTA
                     RPGSTHGYDTIDPTRVNPELGGEEGLRRLVAELRRHEMGLIVDIVPNHMAAASGNAWW
                     MEVLARGRDSRYARYFDIDWEPDDPHLRGKVLLPILGRPYEEALAAGEIALRGDNAGN
                     AFIQYFDHTFPLAAGALTLCEQASSAASDPASSAGRTRLHRLLEEQHYRLAWWRTAND
                     EINWRRFFDISELVAVRVEDDEVFEAVHATLFRLYAEGLMDGVRVDHIDGLARPQDYC
                     TKLRTRLHALERERPKHCPAGPAYFIVEKILADGEKLPQGWGTDGTTGYDFMDEVSAL
                     QHDEAGGQPLTDLWERVSGRFGDFGREEEPARREILQQSFSAQLGGVVRAFYQIAQGD
                     LTTRDIVRPAIHRVLTEILVHFPVYRIYAGVAHASPPDLSFLAQAVARAKITCLPSDR
                     WLVGILGRWLGGARIRSGADAQQAIALARFQQLSAALCAKAVEDTAFYRYGRLVSRND
                     VGFDPRRLSCASAEFHRRIQERAADFPHSMLATATHDHKRGEDVRARLAVLSELAGEW
                     TRAVKRWIGLCVAHCATAGTTPMPSAGDIAILLQTVVGAWPPGLEPTNRGRLAAYAKR
                     IAAWQQKALREAKLFSDWSAPNESYERAARELVAWLLAGPSELLAEIADFAPRIAPAG
                     AVNGLAQALLKLTVPGVPDIYQGTEYWDFSLVDPDNRSPVDFAMRRRSLGKNSAAAPV
                     AGLAADWADGRIKQAMIARVLAVRKKMPHLFADGSYVPLEADGPFAGHVFAFARILGN
                     SAAIVAICRCCTSLLSDDGSLTIPPARWKDTRILLPRELQGIKLGSVLTGEEIATGDH
                     PFAAAQILSSLPVALLTDQSR"
BASE COUNT         3396 a         6653 c         6443 g         3616 t
ORIGIN      
        1 ggttggcggt agagaaagat gcgcccgata atctcattcg ccggggaccg catcttcaac
       61 gatgcgcacc agttcggcca tgatgcgatt cagctcgaaa tccttcggtg tgtaaacctc
      121 ggcgacgcca gccgccttga gcgcgctcgc gtcctgcggc gggatgatgc cgccgacgac
      181 gaccggcacg tcatcgagcc cggcgtcctt caggcgcgcc atcacgtcat gcacgagcgg
      241 caggtgcgag ccggagagaa tcgacaggcc gaccacgtgc acgcgcttct cggccgccgc
      301 cgcggcgatc gcttccgccg tgagacgtat gccgtcgtag accacctcca tgccggcgtc
      361 gcgcgcccgc gccgcgatct gctcggcgcc gttggaatgg ccgtcgagcc ccggtttgcc
      421 gacaaggagt ttcaagcgcc ggccgagctt cttcgatacg cggtcgacct cggcacgaag
      481 gtcgtcaagg ccttcggcat cattgcgcat ggcggtgccg acgccggtcg gcgcccggta
      541 ttcgccgaat gccgcgcgca gcgcaaagcc ccactcgcca gtggtgacgc cggctttggc
      601 gcaggcgatc gaggccgcca tgacgttggc gccgctgcgc gccgcctggc gcagggcctt
      661 gagcgcctcc tcgaccgctg tggcgttgcg cgcggcgcgc cacgctttaa gccgcgcaat
      721 ctgctcggct tccgtttcct ccgacacggt gacaacggcg ccagcggcct cggcgagcgg
      781 cgagtcttcg gtctccacga accggttgac gccgatcacg acctgctcgc cgcgctcgat
      841 cgcttcgacc cggcgcgagt tcgattcgac gagctgccgc ttgaggtagc cttgctcgac
      901 ggcgacgaca gtgccgccca tcttctcgat ctgcccaagt tcctccttcg ccgcggtctt
      961 cagcgcggcg accttggcgg cgatcgccgg cgagccgtcg aaaatgtcgc cgtattccag
     1021 aaggtcggtc tcgtaggcga ggatctgctg catacgcagc gaccattgct ggtcccacgg
     1081 ccgcggcagg ccgagcgcct cgttccaggc cggaagctgc accgcccgcg cccgcgcgcc
     1141 cttcgacagc gtgaccgcaa gcatctcgag caggatgcgg gcgacgttgt tctctggctg
     1201 ctgctcggtg agcccgagcg aattgacctg cacgccgtag cggaacagcc gctgcttggg
     1261 atcgccgacg ccgtagcgct cgcgcgtgat ctcgtcccac aactcggtga aggcgcgcat
     1321 tttgcatatt tcggtgacga aacgcagccc ggcgttgacg aagaaggaga tgcgtccgac
     1381 cacttcgcca aaccggtcgc cggcgcattc gcccgacgcc ttgactgcat cgagcacgcc
     1441 gatcgcggtc gcgagcgcaa aggcaagctc ctgcaccggc gtcgcacccg cttcctgcag
     1501 gtgatacgag catacgttca tcggattcca tttcggcatc tcccgggtcg tgaacagaat
     1561 cacgtccttg gtgagccgca tcgacggcgc cggcggaaat acgtaggtgc cgcgcgagag
     1621 atattccttg atgatgtcgt tctgcgtcgt gcccgtgagt ttttcgcgcg gcacgtcctg
     1681 ctcgtcggcg agcgccacat agagcgcgag cagccaggcg gcggtcgcgt ttatggtcat
     1741 cgacgtgttc atctcgccga gcgggatgcc gtcgaacaac gcgcgcatgt cgccgagatg
     1801 ggagatcggc acgccgacct tgccgacttc gcctttggcg agcgggtggt cgctgtcgta
     1861 gccggtctgt gtcggcaggt cgaaggcaac ggagaggccg gtctggccct tgcccaggtt
     1921 cttccgatag agcgcgttcg acgccgccgc ggtcgagtgc ccggcatagg tgcgaaaaat
     1981 ccaaggcttg tcgcgtgctt tcttgcggtt ctgctgatca ggcatgatgg tcgcatccag
     2041 tccggcaacg ccaatgtgac gcggaatatg ttgcgttgca acaagcactg gtcatcacgg
     2101 ccggtacttg gtgagcaccg ggcgggcgac gaccgtctgc aaagcttcgg cgctatcgag
     2161 ggcgtcgtca tcagcgagcg gctgcggatt tatcacctca cgcgttggcg ttgggcagcc
     2221 gaacggaccg aacacccccg ctaggtgcaa ggcggcatcg ggccgcgtca cggcgcgctc
     2281 aaagttgttg cgaagctctt tgccgcctcc tgacgcttcg ccccgcacat ctgacaccac
     2341 ttcaacacca tgagagtgcg cgccgtttgc atggaacttt ttagcgatga gccatttgat
     2401 gaaagaggat tggcggcatc tggcttgtag cagggggcca ttcgacccat gcctgcaaag
     2461 cgcttttctg aggtcaatca atcgcgcgaa ttgtttgcac cgaggatata ctatttccac
     2521 ccgctgctag ccggtgatcg cgcttcctgg ccgcaccact tgcggcgatg ccaagaaatg
     2581 caattcgacc acgtgctcac cgggccgctg tttgcgccgg gcgcggacgg gaatatattc
     2641 ctcacgggcg atcatgagcg cgttcattgc gcgatcgacg gctcgcacga cgcggatgcg
     2701 ttcgtcgccg gcttcgccga gacttgccgg cagcacggac tgcgcctcct cgccgatatc
     2761 gtcgtcggcc gcgtcgctcc gcatgcggat gttgcgcaat ccgcgccggg ctggtttcac
     2821 gtcgacgagc cgacgagcca gcgggtcgat ccccggtcgt cgctgcggca gccgaacgcc
     2881 gcctatgccc gcttcgacga tccggtgatt gcgaaggagg tcgcaggctg gtgggccgaa
     2941 cgcctgattc ggctcgccga ccgagatgtc gccggcttcc gctgcctcga tccgcaactc
     3001 gtgccagcga acgtctggcg ccatgtcatc gccgcggtcc agcagaagtt tccgcattgc
     3061 cggttcctcg cctggacgcc gggactcgcc tggcgaaacg tcgctcaact gaaagagttg
     3121 ggtttcgccg gggcgttttc gtcgctgccc tggtgggatg gccgcgccag ctggttcgtc
     3181 gaagaacatg agctgctgcg tacgatcggc tcagtcattg cctgtccgga agcgccgttc
     3241 ggcacccggc tggcgcggcg gttcgaagac gcgccggatc aggcacaggt ctaccggcat
     3301 tggctgcgtt gcgcggtcgc gaccggtgac gggctcatgg tgccgatggg attcgagttc
     3361 gcggtcagcg aagacatgga cgaccgccaa accgcgaatg ccggcttcgc gcccatcggt
     3421 gcggcgcgca acctcgacgt gacggcagag atcggcgagg cgaacgcgct gagcgagcag
     3481 ctgtcggggc tcggcatcgc cggcgagatg cgcacgctca ccgatcccgc agcgcctgtg
     3541 accgtgcttc tgcgctccga cgcaccggac gttcggcagg cgcggagccc gatcgtggtg
     3601 atgatcaatc ccgactggca gcgcgaacat ccgctcccgg tttcgctcga tccgctgccg
     3661 gctgcggcag gtgcaagcct ggccgccgag gaaacaatcg ccgccgatca cgaatcgaac
     3721 gttctcgtcg gcggcgaagt gcgcattctg cgcgcgcgcc cgaccgggcc gatcaaatca
     3781 cggcgcgccg atctccggcc ggcgaagctc gcggcggcgc cgcgcattgt gatcgacagc
     3841 gtcgttccca gcgtcgaggg cgggcgattt gccgccaagt gcgtgatcgg cgagcccgtg
     3901 accatcgccg ccgatgtgtt catcgacgga cacgaactgc ttgtggtcga ggtgctgtgg
     3961 cgcgccgcgg atcaaaagga atggcgccgc gagccgatgc ggctgctcgg caacgaccgg
     4021 tggcaagcga cgatcttgcc tgaccggatc ggccgctacg agtttaccat cgaggcatgg
     4081 gtggaccggt acggcacgct gtgccgcgac gtcgaaatca agcgccccgc gggcggcgac
     4141 gtggccgtcg agatcgcgga agcgcgccac cttttggagc aggccaagga gcggacgcag
     4201 gacgacgccg gcaatgtcat ctcggccgcc ttgacctggt tgcgcgatgc cagcgtcgac
     4261 gcgagcgcgc agattctgct cacccccgac ctgcgcgagg tgatgcggga ggccgaggag
     4321 caacttttcc gctgcggctg cgagccagcg ttcgcgctcg acgtggagcg cccgcaggcg
     4381 gccttcgcct cctggtacga gctgttcccc cgctccgcca ccaccacgtc cacccgtcac
     4441 ggcaccctgg ccgacgtcgt ccgccgattg ccggcgctgc gcgacatggg ctttgacgtg
     4501 ctctatctgc cgccgatcca tccgatcggg aacaccaatc gcaaaggcaa gaacaacagc
     4561 ctgcgcgccg aggcagacga cgtcggcagc ccttacgcga tcggtagcag cgagggcggg
     4621 cacacggcga tccatcccgc tctcggcacc ctcgacgact ttcggcagtt gcgcgcggct
     4681 gcggccgacc acggaatgga gctcgcgctc gatttcgccg tccagtgctc acccgaccat
     4741 ccctggctca aggagcaccc cgaatggttc agctggcggc cggacggctc ggtgcggtac
     4801 gcggagaatc cgccgaagaa atacgaagac atcgtcaatg tcgatttcta cggcggccaa
     4861 tcgataccgg acttgtggat tgcgcttcgc gacatcgttc tgttctggct caacgagggg
     4921 gtgcgcatct ttcgcgtgga caatccgcat accaagccgc tgccgttctg ggagtggctc
     4981 attgcccaag tgcgctcgcg caacccggaa gtgatcttcc tgtcggaagc cttcacgcgg
     5041 ccgaaaatga tgtaccgcct ggcgaaaata ggcttctcgc agtcgtacac ctacttcacc
     5101 tggcgcaatt cgaagcagga gatcaccgac tatttcgtcg agctgacgac gtcggaggtg
     5161 aaggactatt tccgtccgca tcttttcgtc aacacgccgg acatcaatcc gtatttcctg
     5221 cagacatcgg ggcgtcccgg ctttctcatt cgcgccgcgc tcgcggcgac gctctccggc
     5281 ctctggggaa tgtactcggg gttcgagctt tgcgaggcgg cggcgctgcc gggccgtgag
     5341 gaatatctgg attcggagaa atacgagatt cgcgtgcgtt cgcgcgatgc ccccgggaac
     5401 atcatccccg agatcaggaa gctcaaccgc atccgcaaga gcaacccggc gctgcagacg
     5461 catctcgggc tgcgttttta tccggcgcat ggcaaccagg tgatcctcta cggcaagccg
     5521 ttgcttgccg gcgacgacat gatcctgatc gccgtcagcc tcgatccgtt tcatgtgcag
     5581 gaggtcacga tcgaagtgcc gctgtgggaa tggaagcttt ccgacagcgc cgccgtcgcg
     5641 gtcacggacc tgatgcggga gcaaaagttc acctggcacg gcaaattgca gcgcatacgg
     5701 ctcgatcccg ccgaacttcc cttcgcgatc tggcgcatcg cacctcgccc cggaggctga
     5761 cgatggacgc acgcagcgta cagcagacga cgagtgcggc ggagcagctc tggtacaagg
     5821 atgcgatcat ttaccagctg cacgtcaaat cgttcttcga cagcaatgac gacggtatcg
     5881 gagattttcc cggcctcatc tccaggctcg actacatcgc cgatctgggc gtcaacgcga
     5941 tatggctgtt gccgttctac ccgtcgccgc gcctcgacga cggctacgac atcagcgcct
     6001 atcgcgacgt gcatcccgac tacggctcgc tcgccgactt ccgccatttc gtccgcgccg
     6061 cgcattcccg cggcattcgc gtcatcaccg aaatggtgat caaccacact tcggaccagc
     6121 accgctggtt ccagcgtgcc cgccacgcca agccgggatc gccctggcgg aatttctatg
     6181 tctggtccga caccgatcag aaatacgccg gtacacgcgt catcttcatc gacgtcgagc
     6241 gctcgaactg gacctgggac cccgtggccg gcgcctatta ctggcaccgg ttctattcgc
     6301 atcagcccga tctgaatttc gacaatccgc aggtgctcaa ggcggtgctg agcgtgatgc
     6361 ggttctggct gcagctcggc gttgacggct tgcggctcga tgccgtgccc tacctggtgg
     6421 agcgcgaagg cacgagcaac gaaaatcttc cgcagacgca cgagatcctc aagcgactgc
     6481 gcgccgaagt cgatgcggcg tttcccggcc gcatgctgct cgccgaggtc aatcagtggc
     6541 cggaggacac caaggactat ttcggcgagg cggacgagtg ccacatggcg ttccacttcc
     6601 cgctcatgcc gcgcatgtac atggcgatcg cccgcgaaga ccgcttcccg atcaccgaca
     6661 tcatgcggca gacaccggcg atcccggaaa gctgccagtg ggccgtcttc ctgcgcaatc
     6721 acgatgaatt gacgctcgaa atggtgaccg acagcgagcg tgactatcta tggcagacct
     6781 atgccgcgga ccgtcgtgcc cgcctcaatc tcggcatccg gcggcggttg gccccgctgc
     6841 ttgagcgcga ccggcgccgg ttcgaactga tgaactgcct gttgctttcc atgtccggca
     6901 cgccggtcat ctactacggc gacgagatcg gcatgggcga caacatccat ctcggcgacc
     6961 gcaacggcgt gcgcacgcct atgcaatggt caccggaccg caacggcgga ttctcgcgcg
     7021 ccgatccggc ggcgctggtg ctgccgccga tcatggatcc gctttacggc tacggcgcgg
     7081 tgaacgtcga ggcgcagacc cgcgatcctc actccgttct caactggaca cggcgcatgc
     7141 tcgccgtccg gcgccggcat ccggcgctgg ggcgcggcac gctgacgttc ctgtatccga
     7201 agaatcgcaa gattctcgcc tatctgcgcg agtacgcggg cgaaaccatt ctctgcgtcg
     7261 ccaatgtcgc gcatagctcg caggcggtag aactcgatct gtcggcgttc gccggccgcg
     7321 tccccgtcga gctcaatgcc ggtacgccgt ttccgccgat cggcgaactg acctatctgc
     7381 tcacgctgcc gccctacggc ttttactggt tcgttctcgg cgaggcgagc gactggccgg
     7441 catggcacac gccggcgcct gagccgctgc cggaattcgt gacactcgtt ctccgcgaga
     7501 acctcggcaa ggtgctttcg acaacggcgg aggcggtgat cgcgcgcgag atactgccgc
     7561 aatacatcct caagcgccgt tggtttggcc tgaaggacca gtcgatcgaa tcgacccgta
     7621 tcgctcacct cactaacata ggcgaggccg ggcgcgagtt cctgctcggc gaggtcgagg
     7681 tgaagagcgg cggcggtgcg agctgctggc tgctgccgct ggccatcctt tgggaagacg
     7741 agccgtcagc ggcattgccc aatcggctgg cgctcgcgcg cgtgcggcgc gggcggcgcc
     7801 tcggtctgct caccgatgcg tttgcgctgc cgggcttcgc gcatcgcttc gtttcttgcc
     7861 tggcggcggg ccagggattc gaacacgctg acggcgtggt gcgtttccag gcaacggaat
     7921 cgggccgcga acagctcaaa actaaaccgg atgcggaggt caattggctc gcggcggagc
     7981 aatcgaacag ctcgctgacg gtcggcgacg cggtgatgct gaagatctat cgccgcatct
     8041 tgcccggcac gcaccccgag gcggagatcg gccgctatct cacggcgcaa ggattcgcgc
     8101 atgcgccgcc gctcctcggc gacgtcgtgc gcatagccgc cgacggtacc cccttcacgc
     8161 tcgccgtggc ccttggtttc gtccgcaatc agggcgatgc gtgggcgtgg atcctcgacc
     8221 agctgcagcg cgccattgac ggcctcgccg cggcggaacc cgcgggggat acggaggccg
     8281 acctgctggc cgactgcgag gccgtgatcg cggtgatcgg cagcagacta ggcgagatgc
     8341 acgccgtgct ggcgcgcgaa acttccgaag cagcgttcgc gccgaaaatc gccggcgcgg
     8401 ccgacgccgc gcaatgggga cgcaacgtcg agaagaggat tggcaccgcg ttcgatgcga
     8461 tcggccgcac acgcactttc gagcgcgagc aggaccgcga gcgtgcgagc gtcctcctga
     8521 gccagcgcag cgatattgtc gctgccgtgc accgactggc caagtctggc gccggaacct
     8581 tgatgacgcg catccatgga gattttcatc tcggtcaggt gctggtggca agcggcgacg
     8641 cctacatcat cgatttcgag ggcgagccgg caatttcgat tgccgaacgt cgcgccaaga
     8701 ccagcccgct ccgcgatgtc gccggcctcc tccgttccat cgactatgcc ggcgccacca
     8761 cggtcgaacg caagggcgtc ggcgccatgc cggtagacga ggcgcagcgc gaccatctta
     8821 tcgcgcaatt tcgccagcgt gcgtcgaagg cctttctgcg ctgctactgg gaggcaagct
     8881 ctaacagcga cgggccggcc gcgcgcgctc tgctcgatct cttcctcatc gagaaggccg
     8941 cttatgagct tgcctacgag gccgccaacc ggccgacgtg gatcggcgtg ccgctcgccg
     9001 gactgtcgtc gctcgttgcg cggatcatcg agaaagacgg tggaggccgc catggctgag
     9061 gcagggctca aaccggtctg gcggctcgat caacaatcgg cgcacgcgct cgctcttggc
     9121 acgcacgaca atcccttcgc cgtgctcgga ccgcacgata cccgcgaggc acgcgtcatc
     9181 cgcgcctttc tccccggtgc gaccaaagtc gatgtcgttc gccggtccga tggtgccgtc
     9241 ctggcgacgc tcgagcccgc gaacgaaccc ggtctgttcg agggcctcct tgacgagcga
     9301 ggaccctatc ggctgcggat cgcgtggccg gatgcggtta acgagacgga agatccgtat
     9361 tccttcggat tgctgctcgg ggatctcgat cttcatttgt tcagcgaggg tcgccacttc
     9421 gagctggcgc gctgcttcgg tgcgcagacg gtcgccatcg acggcgtcaa cggcgtgcga
     9481 ttcgccgtct gggcgccgaa cgcctcgcgc gtcgccgtcg tcggcgattt caattcctgg
     9541 gatcgccggc ggcaccccat gcgcgtgcgc cacggcggcg gaatctggga gctgttcatt
     9601 ccgcgcgtgg caccgggatc gcgttacaaa tacgacatcg ccggtccggg cgggatcgag
     9661 gcggcgtgga aggccgaccc cgtcgcccga cagaccgagc cgccgcccgg caccgcctcc
     9721 atcgttccgc agccggacga tcaccgctgg cgcgacgacg cctggatgca atcacgcggc
     9781 caacgccagg cgcccgacgc gccgatctcc atctatgaag tgcatctcag ctcgtggctc
     9841 aagccgcggc aattggccga ggaaagctcg ctgtgggatt tcgccgtcga gcgcctggtg
     9901 ccgtatctcg tcgaaatggg attcacgcat gtcgagcttc tgccgatagc cgaatacccg
     9961 ttcggtggct cctggggcta tcagccgctc agcttgtttg cacccagcgg ccgtttcggc
    10021 gcgccgcagg gtttgtcgcg gttcgtggac gtgctgcacg gcgccggcat cggcattatt
    10081 ctcgactggg tgccggcgca cttcccgacc gatccgcatg ggctggcgcg attcgacggc
    10141 accgccctct acgagcatct cgatccgcgc gagggctttc accaggattg gaacaccttc
    10201 atctacaatt tcggccgccg cgaggtgcag ggcttcctga tcgccagcgc gctctactgg
    10261 ctcgagcatt ttcacattga cggcctgcgt gtcgacgccg tcgcctcgat gctctatcgc
    10321 gactacagcc gccgcgaagg cgaatgggtt ccgaatgtcc acggcggccg cgagaatctc
    10381 gaggcgatcg gttttttgcg ccacctcaac gcggtgatcg ccgagcgttg tccgggagcc
    10441 atcatggtgg cggaggaatc gaccgcctgg ggcggcgtca gccggccgat ttcaaccggc
    10501 ggactgggat tctcctacaa atggaacatg ggatggatgc acgacacgct cgattacatg
    10561 gcgaaagagc cgatccaccg gcagtatcac cacagcgaga tgactttcgg cctgctgtac
    10621 gcgttttccg agaacttcat cttgccgctg tcgcacgacg aggtggtgca cggaaaagga
    10681 tcgctgatcg gcaagatgcc gggcgaccgc tggcaacgct tcgccaatct gcgtgcttat
    10741 ttcggcttca tgtggggtca tcctggcaag aagcttttgt tcatgggcag tgagtttgcc
    10801 caggagcgcg aatggaatca cgaccgcgaa ctcgactggc cctcgatcga ggaccccgcc
    10861 catgccggcg tccagcgcct ggtgcgcgac ctcaaccatc tctacgcggc cgaaccggct
    10921 ctgcatcgcc gcgattgcga gccgagcggc ttcatgtgga cggtcggcga tgaccggtcc
    10981 aattccgtct tcgcgtttct gcggctcggg ccgagcccaa cggcgccgat cctcgtcgtc
    11041 tccaatatga cgcccgttcc gcggcgcaat tatcggatcg gcgttccgcg gggcggcggc
    11101 tggcgcgaga tcttcaacag cgattccggg tactacggcg gatcgaacgt gggcaacgaa
    11161 gggcgcgtcg ataccgctct catcgcggcg cacggacacc cgcaatcgct ggaactgatg
    11221 ctgccgcctt tgtccacgat cttcctgcgg cacgacggct agtcaatggc gtcattgccg
    11281 gcccaactcg atcgcggcaa tccctatccc cttggcgcca cctgggacgg cttgggcacc
    11341 aatttctccg tgttctccgc acacgccgaa cgcatcgagc tttgtctgtt cgatcccgcc
    11401 ggccgccgcg aaatcgcgcg ccttgatctg cccgaatgca ccgacgaaat ctggcatggc
    11461 tatctgccga acgcgcgcac cggattgatc tacggctatc gtgcccacgg tccctacagt
    11521 ccccaggaag gacaccggtt caatccgcac aagctgttgc tcgatccata cacaaggcag
    11581 ttcgccggga cgctgcgctg gtccgacgcg ctcttcggct atcgcatcaa ttcgccacgg
    11641 gccgatctct cttatgaccg ccgcgacagc gcccagggca tgctgaaggc ggtggtgagc
    11701 gacgacgtgt tcgattgggg agatgaccgg ccgcccaacg tcccgtggtc gaagaccatc
    11761 atctatgaga cccatttgcg cggcatgacc atgctgcgac acgacatgcg tgccaacgag
    11821 cggggaacct tcgcggcgtt ggcggacgcc gacgtcatcc gctatctcaa gtcgctcggc
    11881 gttacggccg tcgagttgct gccggtccac gctttcttgc aggatcgcac cctgctcgag
    11941 cagggcctga agaactactg gggctacaac tcgatcggct tcttcgccat cgagccgcgc
    12001 tacttgtcgg atggatcgcg tagtgaaatg cgcgtggccg ttcgccggct tcatgccgcc
    12061 ggcatcgagg tcattctcga tgtcgtctac aatcataccg ccgagggaag cgagttcggg
    12121 ccgacactgt cgtttcgcgg gctcgacaac gccagttact accggctggt gccggaaaac
    12181 cgccgccact acatcaacga caccggcact ggaaacacgc tgaatctgtc gcatccacgc
    12241 gtgctgcaga tggtgatgga ctcgcttcgc tactgggtca cctcgttcca tgtcgacggg
    12301 tttcggttcg atctcggggt gacgctgggc cgcgaggccc atgggttcga tcccggttcg
    12361 ggtttcttcg acgccctgcg ccaggatccg atcctgaccc gggtgaaact gatctccgaa
    12421 ccctgggacc tcggccccgg cggctaccag ctcggccatc acccgccggg atttgccgaa
    12481 tggaacgacc gcttccgcga cagcaccagg cggttctggc gcggcgatgc cggcgagcgt
    12541 cccgagttcg ccgcgcgtct tgccggctca agtgatttgt tcgaccgcca agcgcgtcac
    12601 ccctgggcat ccgtcaacta cgctgcctcg catgacggct tcacgcttgc cgacatcttg
    12661 agctactccc accgccataa cgaggcaaac ggcgaagaca acaatgatgg tgccggcgag
    12721 aacttttccg ccaactgggg cgttgaaggc ccgacgccgg acaaatccat attggagaca
    12781 cgcgcgcgca ttcagcgggc catgctcgca accgtcatgt tcgcccacgg cacgccgatg
    12841 ctgctcggcg gcgacgagtg ggggcgcacg cagggcggca acaacaatgc gtactgccag
    12901 gacaacgaga cttcctggtg ggattggagc cgggtcaatt cggcgcaggg ccgcgagctg
    12961 cgaagctttg cggccaagct cattgcgcta cgccagaagc ataccgcgtt gcgctcgcgt
    13021 cacttcctgc acggcctgcg cgagctggcg ccgggcatct tcgacatcgc ctggtttgaa
    13081 gcgaacggcg gaatgatctc cgaggattct tggaaaaatc cggaaattcg cctgctctgc
    13141 ctgcgccgtg cgacccgcaa tgccgacggc acggtttcaa tcctgaacct tctcctcaat
    13201 cccaccagcg aagatcattt tttccggctg ccggatccgg ttctgccggc gcgtgttctc
    13261 gtcgacagcg cgcggcccga ggccggagag cccgccgtga acgacaacaa gatcgatgtc
    13321 ctctcgcgca gcgccgtgct ggtctacgcc tggctggaga acccgccgca atgatgcgta
    13381 cgggctggcg tcttcctttc ggtgcgaatc tcatcggaca tgaccggacg caatttcgca
    13441 tctgggcgcc ggcgcagcca acgatgtcgg tcgccgtcga gggcgccgcg ccgctaccaa
    13501 tgtcgcgaag cgatgacggc tggttcgagg ccgaagcgaa ctgcggagct ggcgcgcgtt
    13561 atcgctacat tctgccggac ggcgccaccg ttcccgatcc cgccgcgcgc gcccagcacg
    13621 gtgacgtgcg gggcgccagc atcgtcgttg atccgctgtc ctatcgctgg cgccatccgg
    13681 actggcgggg gcggccgtgg cacgaggcgg tgctctacga agcgcacgcc ggcctgctcg
    13741 gcggcttcgc cggcgtcgcc cgcgaactgc cacgccttgc cgcgctcggt gtcaccgccg
    13801 tcgagttgat gccggtcgcg gaatttccgg gcggccgcaa ctggggttac gacggcgctt
    13861 tgctgttcgc gcccgagagc agctacggca gccccgacga tttgcgcgcg ctcatcgatg
    13921 ccgcgcacgg tcacggcctg atgatgtttc tcgacgtcgt ctacaatcac ttcgggcctg
    13981 aagggaacta tctcgcgcgc tacgcgccgg cgatgttccg agatgacgtg gcgacgccgt
    14041 ggggtccggc gctcaatttc cgccgccgcg aagtgcgccg gttcttcacc gagaacgcgc
    14101 tttactggct cctcgaatac cgcttcgacg gcctgcgctt cgacgccgtt catgccatag
    14161 ccgatgccgg ttggctcgac gaaatggccg ccgaggtgcg caagagtgtc gagccggggc
    14221 gacatgttca tctcgtgctc gaaaacgacg acaacgctgc cgcgcacctc gcccgcggtt
    14281 tcgatgcgca gtggaatgac gacggtcatc acgtgctgca cgtgctgctg accggtgaaa
    14341 gcgaaggtta ctacgaggac tacgccgatc ggcccgccga gcggctggcg cgctgcctca
    14401 aggaaggttt catttatcag ggtgagccct cggcctatcg cggcggtaag tcgcgcggca
    14461 cggcaagcgc cgatctgccg ccgaccgcct tcgtgctgtt cctgcagaac cacgatcaga
    14521 tcggcaaccg cgcgttcggc gaacggctga cgcagctggc gcatccccaa gcacatgagg
    14581 ctgcaatcgc cctgctgctg ctctgtccgc aaatcccgct tctgttcatg ggcgaggaag
    14641 gagcaagtac gtcgccgttc ctgttcttca ccgagcacgc cgcggaactg gcgcaggccg
    14701 tacgcgacgg ccggcgccgc gagtttgcga agttctcgca attttccgat ccaaagcatc
    14761 tcgacaaaat tcccgatccg aacgccaccg tcaccttcga gcgttccaag ccggtcgctg
    14821 attccgcccg ggcaggggcc cgcgaacggc tttaccgcga cctgctggcg ctgcgccgtg
    14881 ccgagattgt cccacgcctt gccggggcgc gtgccgtcga tgcccgcgcg atcagctctg
    14941 ccgccgtgac cgcatcctgg cggatgggcg acaactcgct tctcaccatc gccgtcaatc
    15001 tcggtgccga ggcggcagag ataccgcggc atcgcgggcg tctactgttc gcaagctccg
    15061 atgcggcggc gctggcggcg caacagggcc ggatcggacc atattccacc gtggcgatgc
    15121 tggaaccgcc atgagcgacg cggctgttcg cgagttcgcc ggccgtgccg ggattgccgt
    15181 cgagtggagg gactacgcga acgaacaaca ccgcgtatca gccgaaaacc tccgccgcat
    15241 tctcgcagca ctgcagcttc cctgcgacac ggccgcagac ttggcgcaga gccgccgcca
    15301 actggagacc tcgcggctgc cgccgctgat cacggcaacg acaggacacc cgttcgaggt
    15361 gccggctgcc ggaaaagtcc cggatcgggt gcgggtcact tacgaggacg gcacgattgc
    15421 ggagcttcca gtgcgcagcg cgctgcgcgg cgtgcgactg cccggcatcg agacgccggg
    15481 ctatcacgtc atcgagttag gagccgagcg cattacggtc gcgatcgcgc cgccgcgctg
    15541 ctacacgatc gcggacatta caccagagga gcgcccgtgg gggctcgcgg tgcaagccta
    15601 cggcctgcgc ggcgccggcg attgcggcat cggcgacacc gccggcgtca tcgcgcttgc
    15661 cggcaaggct gccggccttc gggcagacgc cgtcgcgctc agccccgtgc acgcgctgtt
    15721 tgctgccgat ccaaaccatt tcagcccgta ttcgccgtcg agccggctct tctacaatcc
    15781 ccttcatgcc gacgcgcgaa cactgttcgg cgacgctcgc gtagcgaaag cggctcatga
    15841 cgccggcgtg gctgcagcgg cggccgaact ggagcaacaa agactgatcg actggcgcga
    15901 gtccgcgcgc gccaaaatgt cggtcttccg gcgcctgttc gaggatttct cgtcgaccga
    15961 tctcgccgca cgcgcggcga tgccgctggc cgcggatttt gcgcaatttc gcgcggccgg
    16021 gggagcgctg cttgccgctc atgcgcaatt tgaagcactg cacgcagcaa gatttgccgc
    16081 cgatgggtcg gcctggaatt ggcgcgattg gtccgaagcg tggcgcaacc cggcaagcgc
    16141 ggaagtgaca aggttcgcag agacgaatgc gagcgaggct gcgttccatt gctttctgca
    16201 gtcgatcgcc gatcgttcgt ttgccgccgc aaagcgcgcg acaaaacaat ccgggatgcg
    16261 aattggcctg atcgccgacc tcgctgtggg catcagcagc gccggcagcg aggcatggac
    16321 caacccgaac aacctgctga tcgatctcga gatcggcgcg ccgcccgacg ccttcaacgc
    16381 gaagggccaa agctggggcc tgaccatgtt ctcgccacgc gcgctccccg ccggcgggtt
    16441 cgcgccgttc atcgccacat tgcgggcatg cctgcggcat tccggcggac tgcgcatcga
    16501 ccacgccatg gggctgcagc ggctatgggt gatccctcgc ggcgccggcc cgaacgaggg
    16561 cgcctatctc ggttatccaa ccgacgatct gttgcggctg atcgcgctgg aatcgcatcg
    16621 gcatcgggcg atcatcatcg gcgaggacct cggcacggtg ccggcgggct ttcgcgaccg
    16681 gatcggtcgc gccggcctct acggcacgcg cgttctctgg ttcgagcggg agcgcaaccg
    16741 tttcgcgccg ccgcaggcgt ggccgacagg ggtagctgcg atgacatcga cgcacgatct
    16801 gccgaccgtc gccggctggt ggcgcggcac ggatatcgac gtgcgggcgc aatgcggcct
    16861 ggtcgaagac ccagacaagg agcgcgcgac gagaacgatg gaccgccaga tgctgtggcg
    16921 ggcatgccgc cgggcgaagg cggccgaggg agatttgccg gcgccgaacg aaacgtcgcg
    16981 cgccgccgac gcggcggtga agttcatcgc gcagacaccg tcccagcttg cgctgctgcc
    17041 gctcgaggat gcgctggccg tggaggatca gcccaatgtt cccggcacca tcgacgaacg
    17101 tccgaattgg cgccggcgct atgctgggca agcggaggaa ctgctcagcc cagcggacgt
    17161 aaggcggcgg ctcgatccgc tggcgcgacg aggacggcga tgagtgcgcc gcgggcgacg
    17221 atgcggctcc agttgcatgc cggctttacc ttcgccgatg cgggagcctt gcttccttac
    17281 ttcgccgcgg tcggcgtcag tcatctctat gcttcgccga tcatgaccgc gcgtccgggc
    17341 tcgacgcacg gatacgacac gatcgacccg acgcgggtca atccggaact cggcggcgaa
    17401 gaggggctgc ggcggctcgt cgctgaattg cgtcggcatg agatggggct catcgtcgac
    17461 atcgtcccca accacatggc cgccgccagc ggcaatgcct ggtggatgga ggtgctggca
    17521 cgcgggcgcg acagccgcta cgcccgatat ttcgacatcg actgggagcc ggacgacccg
    17581 catctgcgcg gcaaggtgct gttgccgatc ctcggccggc catatgaaga ggcattggcc
    17641 gccggcgaaa tagcgctacg cggcgacaat gccggcaacg ccttcatcca gtacttcgac
    17701 cacacatttc cgcttgcggc cggcgctctc actctttgcg agcaggcttc gtctgccgca
    17761 tccgatccgg cctcgtcggc cggacgcacg cgcctgcacc ggctgctcga agagcagcac
    17821 tatcgtctgg cttggtggcg gaccgcgaat gacgaaatca attggcgccg cttcttcgat
    17881 atcagcgagc ttgtcgccgt ccgcgtggag gatgacgaag tgttcgaggc cgttcacgcc
    17941 acactgttcc gcctttacgc agaggggctc atggatggcg tgcgcgtcga ccacatcgac
    18001 ggcctcgcac ggccgcagga ctactgcacc aagctgcgga cgcgcctgca cgcactcgaa
    18061 cgcgagcggc cgaagcactg ccccgccggg cccgcctatt tcattgtcga aaagatcctc
    18121 gccgatggcg aaaagcttcc gcaaggctgg ggaacggatg ggaccaccgg ctacgatttc
    18181 atggacgagg tgagcgccct gcagcatgac gaggccggag gacagccgct gaccgatctg
    18241 tgggagcgcg tcagcgggag gttcggcgat ttcggccgcg aggaggagcc agctcgccgc
    18301 gagattctgc agcaaagctt ctcggcgcag ctcgggggcg tcgtgcgcgc attttatcag
    18361 atcgcgcaag gcgatctgac gacgcgcgat attgtccgcc cggccatcca ccgggttctg
    18421 accgagattc tcgtccactt tccggtctat cggatctacg ccggtgtcgc gcacgcctcg
    18481 ccgccggacc tttcgtttct ggcgcaggcg gtcgctcgcg cgaagatcac atgcttgccg
    18541 agtgacaggt ggttggtcgg aatcctgggc cggtggctcg ggggagcgcg catccgctcc
    18601 ggggcggatg cgcagcaagc aatcgccctt gcccgattcc agcaattgag tgcggcgctg
    18661 tgcgcgaaag ccgtggagga taccgccttc tatcgctacg gccggctcgt gtcgcgcaac
    18721 gacgtcggct tcgatccccg ccggctcagc tgcgcctccg ccgaattcca tcgccgcatt
    18781 caggagcggg cggctgattt tccgcattcg atgcttgcga ccgccacgca cgatcacaag
    18841 cgcggcgagg acgtgcgcgc gcggctcgcc gtgttgagcg aactggcagg cgaatggacg
    18901 cgggccgtca agcgatggat tgggctctgc gttgcgcatt gcgccacggc cggcaccacg
    18961 ccgatgccga gcgcgggcga tatcgccatt ctgctgcaaa cggtcgtcgg cgcctggccg
    19021 ccgggactgg agccgacaaa ccgcggccga ttggcggcct acgccaagcg cattgctgca
    19081 tggcagcaga aagcactgcg tgaggccaag ctgttcagcg actggtcggc gccgaacgag
    19141 agttacgaac gcgccgctcg cgaacttgtc gcttggcttt tggccggacc atccgaactg
    19201 ttggcagaaa ttgccgattt cgccccgcgc atagcgccag ctggggccgt caacggcctt
    19261 gctcaagcac tgctaaagct gaccgttccg ggcgtgcctg acatttacca aggcacggaa
    19321 tactgggatt tcagcctggt cgatccggac aaccggtcgc cggtcgattt tgcaatgcga
    19381 aggcgttcgc tcgggaaaaa ttcggcggct gctccggtgg ccgggcttgc ggcggactgg
    19441 gcggacggcc gcatcaagca agcgatgatc gcccgcgttc tcgcagtgcg aaagaaaatg
    19501 cctcaccttt tcgccgacgg tagctacgtg ccgctggaag cggacggccc atttgctggg
    19561 cacgtcttcg cgttcgcgcg tattttgggc aattccgccg ctattgtcgc aatctgccga
    19621 tgttgcacga gtcttttgag cgacgacggc tcattgacca tcccgccggc gcgctggaag
    19681 gacacccgca ttctgcttcc gcgcgagctc caaggcatta agcttggctc ggtgctgacc
    19741 ggagaggaga tcgcgacggg cgatcacccg ttcgcagccg cgcaaattct ctccagcctg
    19801 ccggttgcgc tgctcaccga tcaatcgcgc taaccatcac acgacttgtg tcgcgcgcgc
    19861 cgcagctttg tgcaaaaccg cgattggcgc cgactccgct cttgtctatc cctcagtcgg
    19921 tacattactg attcggtatc gcggcggcgt ggaatgcaga cacgcagcat ggaacgcacg
    19981 ggagccgggg acttcctaaa gcgtgagggg cgcccagagc ggaaatccga gacgcagcgg
    20041 ccactacctc acggtgcgta ggtagcgaaa aagtggccag ccggagttgc gaccggcccg
    20101 cgatacca
//
LOCUS       DATMQB010000257         4016 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1954895, whole genome shotgun sequence.
ACCESSION   DATMQB010000257 DATMQB010000000
VERSION     DATMQB010000257.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4016
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1954895"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1046)
                     /locus_tag="VNY79_07685"
     CDS             complement(<1..1046)
                     /locus_tag="VNY79_07685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012093350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HWX72363.1"
                     /translation="MRITCIGGGPAGLYLALLMKKRNPAYDISVLERNRPYDTFGWGV
                     VFSDQTMGNLRTADAETYEQITGSFSRWDDIDVHFKGRTITSGGHGFSGIGRRHLLNI
                     LQARCEALGVRLVFEKEVRNEEALDADLIVASDGINSFIRNKYAAAFEPDIEVGKCRF
                     VWLGTRKLFDAFTFAFEETNHGWFQAHAYKFDRDTSTFIVEAPEDVWLKSGLGRMSTE
                     ESIAFCENLFAKYLDGHELMSNATHLRGSAQWLKFPRVVCKTWVHHNGRVPVVLMGDA
                     AHTAHFSIGSGTKLALEDAIELADCLQAASGKAKAGMLDVLKAYEQTRSVEVLKIQNA
                     ARNSTHWFENVKRYT"
     gene            complement(1166..2725)
                     /locus_tag="VNY79_07690"
     CDS             complement(1166..2725)
                     /locus_tag="VNY79_07690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016558302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HWX72364.1"
                     /translation="MRYDAAVIGAGVNGLAAAVHLSAKGWKVAVLERAAVAGGAVKTA
                     EVTLPGFRHDLYAMNLSLFAGSPFFAAHKERLIKAGVEFAPAARSFATAFPDGTWLGV
                     ETDLEATAGRIAAQNPTDAQRWREMAAAFDGDAPHIFALLASPMPSITALRASFGAWR
                     AGGAALLARLARLVLASPRNWLDENFSSEKLKVMMGAWGMHLDFAPDIAGGALFPYLE
                     SMANQKFGMVIGKGGADTIIAAMVRALEAAGGEVRLGAEAVRVLTASGGASAVELADG
                     QRIEASRAIIANLNPRVLSRLLAPPPPAHAQMARLRPGPGTMMVHLALSDLPDWAAGP
                     ALKSFAYVHLAPSFAAMAKAYTEALAGMLPVEPVLVVGQPTAIDPGRAPPGKHVLWVQ
                     VRVLPAKIDGDAAGRIAATNWNSAKEAYADRVVDLIERYAPGFRAKVLARTVLSPHDL
                     ERDNPNLVGGDSLSGSHHLDQNFLFRPAFGFSRYRTAVPRLYMVGASTWPGAGTGAGS
                     GFMLAKILAGS"
     gene            2887..3678
                     /locus_tag="VNY79_07695"
     CDS             2887..3678
                     /locus_tag="VNY79_07695"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006339431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HWX72365.1"
                     /translation="MDGTQLLGQLASALASGAVEVVDLSAPLGPDTPLIKLPPEIGKN
                     TPPIEIHAISHYDKDGPFWAWNWLKLGEHSGTHFDAPVHWISGKDHPNNTTDTIPAKN
                     FVGPACVIDCSGEAAKNHDFLLTVDGVKAWEKTHGDVPPNSWVLMRTDWYKRNNSEAK
                     FLNVDDKGPHSPGPTAETIHYLIAKGVMGWGSETVGTDAGSAGGMDPPFPAHTFMHQA
                     NRYGLASLCNLDRLPPKGAILIAAPLKIVKGTGSPLRVLALVPRH"
     gene            3694..>4016
                     /locus_tag="VNY79_07700"
     CDS             3694..>4016
                     /locus_tag="VNY79_07700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015340910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding protein"
                     /protein_id="HWX72366.1"
                     /translation="MAGADYVIVGSGINALVAAALLGRQGRKVLVLERNDRIGGCIRT
                     EEITAPGFVHDVMATTFVLFLTSPGYAEIGPELEKRGLAFAHTATPTAVLLPDGRHAI
                     LSMHR"
BASE COUNT          691 a         1326 c         1325 g          674 t
ORIGIN      
        1 gtgtagcgtt tgacgttctc gaaccagtgc gtggagttgc gggcggcgtt ctggatcttg
       61 agcacttcga ccgagcgcgt ctgctcatag gccttgagca catcgagcat gccggctttt
      121 gccttgccgc tcgcggcctg caggcaatcg gcgagctcga tggcgtcttc caaagcgagc
      181 ttggtgcccg agccgatcga gaagtgcgcg gtgtgagcgg cgtcgcccat cagcacgacg
      241 gggacgcgcc cgttgtggtg cacccaggtc ttgcacacga cccgcgggaa cttgagccac
      301 tgcgccgagc cgcgcaggtg agtggcgttc gacatcagct cgtggccgtc gaggtatttg
      361 gcgaacaggt tctcgcagaa ggcgatcgat tcctcggtgc tcatccggcc gaggccggac
      421 ttgagccaca cgtcctccgg ggcttcgacg atgaaggtcg aggtgtcgcg gtcgaacttg
      481 taggcgtgcg cctggaacca gccgtggttg gtctcctcga aggcgaaggt gaaggcgtcg
      541 aaaagtttgc gcgttccgag ccagacgaac cggcacttgc cgacctcgat gtcgggctcg
      601 aaggcggcgg cgtatttgtt gcggatgaag ctgttgatgc cgtcggaggc gacgatcaga
      661 tcggcgtcca aagcctcttc gttgcgcacc tccttctcga acacgagcct gacgccgagc
      721 gcctcgcagc gcgcctgcag gatgttgaga agatgcctgc ggccgatgcc ggaaaagcca
      781 tggccgcccg aggtgatggt gcggcccttg aagtggacgt cgatgtcgtc ccagcggctg
      841 aacgaaccgg tgatctgctc gtaggtctcc gcgtccgccg tgcgcagatt gcccatcgtc
      901 tgatcggaga aaacgacgcc ccagccgaaa gtgtcgtagg gccggttccg ctccagcacg
      961 ctgatgtcat aggccggatt gcgtttcttc atcagcaggg ccaagtagag ccccgccgga
     1021 ccgccgccga tgcaggttat tcgcatgcgc ctcgtcccgc gccttggtcc ccttacattg
     1081 ggagaaatag tttaggtgtc aagtattttg cgcccgcccg gttgctttga tcacacaatc
     1141 gttcacgctt gcggcggcat ggccgtcacg agccggccag gatcttcgcc agcatgaaac
     1201 cggagcccgc gccggttccg gcacccggcc aggtcgaggc gcccaccatg tagaggcgtg
     1261 gaaccgccgt tcggtatcgc gaaaagccga atgcgggccg gaacaggaag ttctggtcga
     1321 ggtggtggct gccggaaaga ctgtcgccgc cgacgagatt gggattgtcg cgctcgaggt
     1381 cgtggggcga gagcaccgtg cgggccagga ccttggcgcg gaatcctgga gcataacgtt
     1441 cgatcagatc aacgacgcgg tcggcgtagg cttccttggc ggagttccaa ttcgtggcgg
     1501 cgatgcggcc ggcggcgtca ccgtcaatct tcgccggcaa cacccgcacc tggacccaca
     1561 gaacgtgctt tcccggcggc gcgcggcctg gatcgatggc ggtcggctgt ccgaccacga
     1621 gcaccggctc cacgggcagc atgccggcga gcgcctcggt ataggccttc gccatggcgg
     1681 cgaacgacgg cgcgaggtgc acataggcga aggatttgag cgcgggcccg gcggcccagt
     1741 ccggcaaatc ggagagagca agatgcacca tcatcgtgcc cgggcccggg cgcagccgcg
     1801 ccatctgcgc gtgcgcggga ggcggcggcg cgagcaggcg cgaaagcacc cgcgggttga
     1861 gattggcgat gatggcgcgg cttgcctcga tgcgttgccc gtcggcgagt tcgaccgcgc
     1921 tcgcgccgcc gctcgccgtc agcacccgga ccgcttccgc tccgagcctt acttcgcctc
     1981 ccgccgcttc gagcgcgcgc accatggccg cgatgatcgt atcggcgccg cccttgccga
     2041 tcaccatgcc gaatttctga ttggccatcg attcgagata tggaaacagt gccccgccag
     2101 cgatgtcggg cgcgaaatcg aggtgcatgc cccaggcgcc catcatcacc ttgagcttct
     2161 cgctggaaaa gttttcgtcg agccaattgc gcggcgaggc gagcacgagc cgcgcgagcc
     2221 gggcgagtag cgcggcgccg ccggcgcgcc aggcgccgaa gctcgcgcgc agcgccgtaa
     2281 tcgacggcat cggcgaagcg agcagcgcaa aaatatgcgg tgcgtcgccg tcgaacgctg
     2341 cggccatttc ccgccagcgt tgcgcatcgg tcggattttg cgcggcaatg cggccggcag
     2401 tcgcctcgag gtcggtttcg acgccaagcc aggtgccgtc gggaaacgcg gtggcaaaac
     2461 ttcgcgctgc cggcgcgaat tcaacaccgg ccttgatcag ccgctccttg tgggcggcaa
     2521 aaaacggcga gccggcgaac aggctgagat tcatcgcgta gaggtcgtgg cggaaacccg
     2581 gcagcgtgac ctcggcggtc ttgaccgccc cgcctgcgac cgccgcgcgc tcaaggaccg
     2641 cgaccttcca gcccttggcg gagagatgca cggcggcggc aagcccgttg acccccgcgc
     2701 cgatgaccgc cgcgtcgtac cgcatgcccc gtactgtggc tccacgccgg ccgatacttc
     2761 aagcctaaat aaattcagcc ggccggcgcg gccgcgatgt tccccctggt gcgcttttcg
     2821 gctagtagtc tccgttcgat ctccattgcg gaccaggaaa cgccgcgacc agcgaaggtg
     2881 agcgatatgg acggcacgca gcttctcgga caactcgcgt cggcgcttgc ttccggcgcc
     2941 gtcgaagtgg tggacctttc cgcgccgctc gggcccgaca cgccgttgat caagctgccg
     3001 ccggagatcg gcaagaatac ccctccgatc gagatccatg cgatctcgca ttacgacaag
     3061 gacgggccgt tctgggcgtg gaactggctg aagctcggtg agcattccgg tacgcatttc
     3121 gacgcgccgg tgcactggat cagcggcaag gaccatccga acaacaccac cgacaccatt
     3181 ccggccaaga atttcgtggg gccggcctgt gtcatcgatt gttccggcga agccgcgaaa
     3241 aaccacgatt ttctgctcac cgtcgacggc gtgaaggcct gggagaagac gcacggcgac
     3301 gtcccgccca actcctgggt gctgatgcgc accgactggt acaagcgcaa caacagtgaa
     3361 gccaaattcc tcaatgtcga tgacaagggg ccgcactcac ctggcccgac cgcggaaacg
     3421 atccattatc tgatcgccaa gggcgtcatg ggctggggct cggagacggt cggcaccgac
     3481 gccggctcgg cgggcggcat ggacccgccc ttcccggcgc acaccttcat gcaccaggcc
     3541 aaccgctacg gcctcgccag cctctgcaac ctcgaccggc tgccgcccaa gggcgcgatc
     3601 ctgatcgccg cgccgctgaa gatcgtcaaa ggcaccggca gcccgttgcg ggtgctcgcg
     3661 ctcgtgccgc ggcactgacg ctccgcctgc gccatggcgg gcgccgacta cgtcatcgtc
     3721 ggaagcggga tcaacgcgct cgtcgccgct gcgctgctcg gtcgccaggg ccgcaaggtc
     3781 ctcgtgctcg agcgcaacga ccgcatcggc ggctgcatcc gcaccgagga gatcaccgcg
     3841 cccggctttg tccacgacgt catggcgacg acgttcgtcc tgttcctgac gtcaccgggc
     3901 tacgccgaga tcggccccga actggagaag cgcgggctcg ccttcgcgca cacggcgacg
     3961 ccaacggcgg tgctgctgcc tgacgggcgg cacgccatcc tgtccatgca ccgcca
//
LOCUS       DATMQB010000258         3580 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4424591, whole genome shotgun sequence.
ACCESSION   DATMQB010000258 DATMQB010000000
VERSION     DATMQB010000258.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3580)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3580)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3580
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4424591"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(175..1278)
                     /locus_tag="VNY79_07705"
     CDS             complement(175..1278)
                     /locus_tag="VNY79_07705"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HWX72367.1"
                     /translation="MTRSKPPFRADVVGSLLRTAPLKEARARRERGEISGPQLKEVED
                     REIEKIIKKQEEAGLRLATDGEFRRSWWHFDFLGMLNGVEMYTLDHGIQFHGVQTKAQ
                     SIRIKGKLGFSNHPMLDHFKFLKAHARAVPKMTIPSPAVLHFRLEPNAVDTKVYADRD
                     AIFEDLARTYQQAIRAFYDAGCRYLQFDDTVWAYLCSPAEIKKARDRGLKAERLAQDY
                     AGVINRALEGKPADMVITTHVCRGNFRSTWISEGGYEAVAEVMLGTLGYDAYFLEYDT
                     ARAGGFEPLRFLPKGDKIVVLGLVTTKTGALEKKADVKRRIEEATKYVALDQLCLSPQ
                     CGFASTEEGNILAEDEQWAKLRMIVELAAEVWG"
     gene            1705..2745
                     /locus_tag="VNY79_07710"
     CDS             1705..2745
                     /locus_tag="VNY79_07710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011475323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0104 family protein"
                     /protein_id="HWX72368.1"
                     /translation="MAERLRAAVHFLERNIGFSRIGFALSLTIIIVAVVVLYHILSDL
                     DVEALLDALEATDWRTLAIAGFFVAAGYLTLTFYDLFALRTIGRSDVPYRIAALAGFT
                     SYAVGHNVGASVFSGGAVRYRIYSAWGLGVIEVTKICFIAGLTFWLGNATLLGIGVLE
                     APQAARAVDQLPIWLNRLIALVILTVLSAYVAWVWVKPRVIGREGWQVTLPGGPLTLL
                     QIGIGILDLFCCALAMYMLVPDEPNLGFITVAVIFVAATLLGFASHAPGGLGVFDAAM
                     MVALWQFDKEDLLAGLLLFRLLYYIVPFTLSLLILGTREALLGRAARRLTRPAPIPMA
                     APELVREKTDMP"
     gene            2783..>3580
                     /locus_tag="VNY79_07715"
     CDS             2783..>3580
                     /locus_tag="VNY79_07715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012030243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HWX72369.1"
                     /translation="MTLHDDGVAFLRSGWRGKRFVVATAALVFAGLAAIGALGLGYAV
                     AGFAVVAAAAVLVMRAGDEVSRLVRPVAVSERTDDTLRALVAGLPDPVIALDGNARVL
                     AFNDRARLLAPALRRGEPVSLALRMPELIEAISRACTGGEEQRVQYSERVPLDRWFET
                     VVMPVKREPGSSRTDLVLMTFHDLTPLRRVEEMRADFVANASHELRTPLAALSGFIET
                     LQGPAREDAKARERFLVIMQEQARRMARLIDDLLSLSRIELNAHRRPD"
BASE COUNT          530 a         1179 c         1172 g          699 t
ORIGIN      
        1 gccctgcgca agcgccatgc ggcgaccgtc tatggcgccg gattgctgat cgcggcgttc
       61 gtctcgattc ccatcatcaa cctggcgacg ccgctcttcg ccatgccgtt gatggttcac
      121 gtgcacaagc ggctcgctcg cgtgaaggcg atcgcccgat agcatgcgca tggactagcc
      181 ccagacctcg gcggcgagtt ccacaatcat cctcagcttc gcccattgct cgtcctcggc
      241 gaggatgttg ccttcctcgg tcgaggcgaa gccgcattgc ggggagaggc aaagctgatc
      301 gagcgcgaca tatttggtcg cttcctcgat gcgccgcttg acgtcggcct tcttttccag
      361 cgcgccggtc ttggtggtga cgagaccgag cacgacgatc ttgtcgccct tgggtagaaa
      421 gcgcagcggc tcgaaaccgc cggcgcgcgc ggtgtcgtat tcgaggaagt aggcgtcgta
      481 gcccaaggtt ccgagcatga cctcggcgac cgcttcgtag ccgccctcgg aaatccaggt
      541 cgagcggaaa ttgccgcggc acacatgggt cgtgatcacc atgtcggccg gctttccttc
      601 aagcgcgcga ttgatgacgc cggcataatc ctgcgccagc cgctcggcct tgagcccgcg
      661 gtcgcgcgcc ttcttgatct ccgccggcga gcagagatag gcccagacgg tatcgtcgaa
      721 ttgcagatag cggcagccgg cgtcgtagaa ggcgcggatc gcttgttggt aggttctagc
      781 caagtcttcg aagatggcgt cgcggtcggc atacaccttg gtgtcgacgg cgttcggctc
      841 gaggcggaaa tgcagcaccg ccgggctcgg aatcgtcatc ttcggcacgg cgcgcgcatg
      901 cgccttgagg aacttgaaat gatcgagcat ggggtggttg gaaaatccga gcttaccctt
      961 gatgcggatg ctctgcgcct tggtctgcac cccgtggaac tggatgccgt ggtcgagtgt
     1021 gtacatctcg accccattga gcatgccgag gaaatcgaaa tgccaccatg agcggcggaa
     1081 ctccccgtcg gtcgcgagcc tgagcccggc ctcctcctgc tttttgatga tcttctcgat
     1141 ctcgcggtcc tcgacctcct tgagctgggg cccgctgatc tcgccgcgct cgcgcctcgc
     1201 gcgcgcttcc ttcaacggtg cggtgcgcaa aaggctgccg acaacgtcgg cgcggaacgg
     1261 cggcttgctt ctggtcatcg gcacgcttcc tcctgctggc tcgccggaac gaagcggcag
     1321 ccggttgttt cgtcaactgc aaatcggcct tctcggcgga gccggatggg cctgatccca
     1381 tgggctcgga cccggagtta ctgaacaatg acatccgcga tagcacggac tttggtgccg
     1441 cgcgcggcta agccgttctt gccgaccccg cgcgggatgg tggacggccg cgtactcttg
     1501 cgccgtgttg ccctcgccgc ttggtgtgcg ggaaaatcgc agaccgtcgc ggaactacgc
     1561 ttgccgggtg tgactaaacg cgtgccgcag ccattcggtc ctgccctcgc gcgcgcaagc
     1621 cacatctgct agtgggggcc ggttcacgcc ggtcagcgga aaagcgatca gtcaatgaag
     1681 gagccagctg gcctgaagca cgggatggcg gagcggctgc gcgcggcggt gcatttcctc
     1741 gagcgaaaca tcggcttcag ccgcattggc ttcgcgctga gcctcaccat cattatagtg
     1801 gcggtggttg tgctctatca catcctgagc gacctcgacg tcgaggcgct gctcgacgcg
     1861 ctcgaggcga ccgactggcg gaccctcgct attgcgggct tcttcgtcgc cgccggctat
     1921 ctgacgctca ccttctacga tctgttcgcg ctgcgcacca tcggccgctc cgacgtgccg
     1981 tatcgcatcg cggcgctcgc gggcttcacc agctatgcgg tcggacacaa tgttggcgcg
     2041 agcgtcttct ccggtggcgc cgtgcgctac cgcatctact ccgcctgggg cctgggcgtc
     2101 atcgaagtca ccaagatctg ctttattgcc gggctcacct tctggctcgg caacgccacc
     2161 ctgctcggga tcggcgtgct cgaagcgccg caggccgcgc gagccgtcga tcaattgccg
     2221 atctggctca atcggctcat cgcgcttgtg attctgaccg tgctgagcgc ctacgtggct
     2281 tgggtctggg tcaagccgcg cgtcatcggc cgcgagggct ggcaggtgac tttgcccggc
     2341 ggtccgttga cactgctgca gatcggcatc ggcatcctcg atctgttctg ctgcgccctc
     2401 gccatgtaca tgctcgtgcc cgacgagccg aatcttggct tcattaccgt ggcggtgatc
     2461 ttcgttgccg cgacgctgct cggctttgcc agccacgccc cgggtggcct aggcgtattc
     2521 gacgccgcca tgatggtggc gctgtggcag ttcgacaagg aagacctgct ggccggcctg
     2581 ctgcttttcc gtcttctata ctacatcgtt ccgttcacgc tttcgctgct catcctggga
     2641 acgcgcgaag ccctgctggg gcgggcggcg cggcgcctta cgcggccggc gccaataccg
     2701 atggcggcgc ccgaactggt ccgggaaaaa accgacatgc cttgatgcgg aggtcgatcg
     2761 gcgcccgcgc cgggacatag gaatgacttt gcatgacgac ggcgtcgcgt tcttgagaag
     2821 cggatggcgc ggcaaacggt tcgtggtcgc gaccgccgcg ctcgtgttcg ccggattggc
     2881 cgccatcggc gcgctgggcc tcggctacgc tgtcgccggc ttcgccgtgg tggccgcggc
     2941 ggctgttctc gtcatgcgtg cgggcgacga ggtcagccgc ctggtccggc cggttgcggt
     3001 ttccgagcga acggacgaca cgctcagggc gctcgtcgcc gggttgcccg atccggtgat
     3061 cgcactcgac ggcaacgccc gcgtgctggc gttcaacgac cgcgcgcgcc tcctggcgcc
     3121 agcgctgcgg cggggcgagc cggtgtcgct ggccttgcgg atgcccgagc tgatcgaggc
     3181 catcagccgc gcctgcaccg gtggcgagga gcagcgggtg caatattccg agcgcgtgcc
     3241 gctcgaccgc tggttcgaga ccgtcgtcat gccggtgaag cgcgagcccg gctcgagccg
     3301 gaccgatctg gtgctgatga cctttcacga tctcacgccg ctgcgccgcg tcgaggagat
     3361 gcgcgccgat ttcgtcgcca atgccagcca cgagctgcgc accccgcttg cggcgctctc
     3421 cggcttcatc gagaccctgc agggcccggc gcgcgaggac gccaaggcgc gggaacgctt
     3481 cctcgtcatc atgcaggagc aggcgcggcg catggcgcgg ctcatcgacg acctgctgtc
     3541 gctgtcgcgc atcgagctca atgcccaccg ccggcccgac
//
LOCUS       DATMQB010000259        10380 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2259535, whole genome shotgun sequence.
ACCESSION   DATMQB010000259 DATMQB010000000
VERSION     DATMQB010000259.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10380)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10380)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10380
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2259535"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..408
                     /locus_tag="VNY79_07720"
     CDS             <1..408
                     /locus_tag="VNY79_07720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HWX72370.1"
                     /translation="IAIDILEMKPVAGVEFLQLDFLDETAPARLKAMLDGKADVVLSD
                     MAANATGHRQTDHLRIMALAEAAAHFAREVLSKGGSFLCKVLQGGTEAALLAALKQDF
                     ASVKHVKPPASRSDSAELYLLARGFRGGASATT"
     gene            complement(494..1933)
                     /locus_tag="VNY79_07725"
     CDS             complement(494..1933)
                     /locus_tag="VNY79_07725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_process: GO:0006855 - xenobiotic transmembrane
                     transport [Evidence IEA];
                     GO_process: GO:0009410 - response to xenobiotic stimulus
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HWX72371.1"
                     /translation="MPQPPRSYDRVVPLIVAVALFMENMDSTVISTSLPAIARSFGTN
                     PLALKLAVTSYLLALAICIPASGWTADRFGARHVFRLAIGVFVLGSIGCALSRSLEEF
                     VLARIVQGMGGAMMTPVGRLILVRSIDKTLLVNAMALVTIPALIGPICGPPLGGFITT
                     YASWHWIFIINVPIGLAGLIMATRYIPDVRAERPGRFDFVGFVLSGLGIGGLAFGLSV
                     MGLTFLPSGVVAMLLGVGAASSVAYFFHARRAAAPILDLNLFKFASFRASIFGGFLFR
                     LGIGALPFLLPLLLQIGFNLTPFESGLITFTSALGSMFMKAAVARVLRRFGYRPVLVY
                     NSIISGAFLAACASFVPGMPFLAMVAILLTGGFFRSLQFTSVNTLAYAEIEPPLMSRA
                     TTIVSVVQQLALSTGVAVGALIVEITLRLKHAEAMSAADFPPAFLVIGALTAASCFIF
                     RRLPPYAGAELSGRGSVHPPAANTPRSVQ"
     gene            complement(1940..3826)
                     /locus_tag="VNY79_07730"
     CDS             complement(1940..3826)
                     /locus_tag="VNY79_07730"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HWX72372.1"
                     /translation="MPHKSPPCRLAAWAALALALPLALAAPAHAQSADERRCTGQWRA
                     TPDERITACTVLIESGRYQGANLAILHHDRGLAMRAKGDAARALDDFTEAIGLNASYA
                     RAYADRGSVRLAQRDLDGAIADLDAAIKLDATDAGVFMTRGNALDGKGEFDRAIADYN
                     EAIRLSATYAAAYFNRGLAFRRKGDLDQAIADYDQAIKLDPKNAAAFNNRGIVWFEKG
                     DSDRAVADYNLALRLDPGLAAAYNNRGDAWRAKGDLARAVDDFDHAIKLSPQFGLAYD
                     NRGLVSYQKRDYDRAIADFDAAIRFDPTNAEAYNNRGNAHDDKGERNAAIADYNEAVR
                     LAPRNARIYYDRGIAYRRDGDLDHAIADLSEALKLNPQHAGAYNERGYAYYQKRDFER
                     AIADYDQAIKLNPRFSVAFNNRGNAFDDKGDADRAIADYNDALSIDPSYASAFYNRGI
                     AWRRKGDLDRAIADYDQAIKLNPTAAAYNNRGSAWQAKNDNERAVADFEQAIKLDPRA
                     ADAYVNRGNARRERLDLSGAVADYTRAIELAPQTALAFYNRAWARYLAGNTTEALADA
                     DRAIALNGRSASAFSTRGLIRERLADTAGAIADFRKAIELDPTFQQPAEGLRRLKAGP
                     AASR"
     gene            4120..5604
                     /gene="guaB"
                     /locus_tag="VNY79_07735"
     CDS             4120..5604
                     /gene="guaB"
                     /locus_tag="VNY79_07735"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003938 - IMP dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HWX72373.1"
                     /translation="MLKDYPREGLTFDDVLLKPSLSDILPSEVDIHSRITRSIKLNIP
                     IIASAMDTVTEAHMAIAMAQAGGIGVIHRNLEPAVQAAQVRQVKKFESGMVVNPVTIH
                     PDATLADALELMQEHHISGIPVVEGGGNGRAGKLVGILTNRDVRFATDKQQKVSELMT
                     KDGLVTVRENVDQREAKRLLHQHRIEKLLVVDGDFRCVGLITVKDIEKAVANPNACKD
                     EQGRLRVAAATTVGEAGYARSEKLIEAGVDLVVVDTAHGHSRRVLEAVSRIKRLSNAV
                     QVVAGNIATAEGAKALIDAGADAIKVGIGPGSICTTRIVAGVGVPQLTAIMDTVEAAK
                     STDTPVIADGGIKYSGDLAKAVAAGAECAMVGSLLAGTDETPGEVFLYQGRSYKTYRG
                     MGSVGAMARGSADRYFQQEIKDTLKLVPEGVEGQVPYKGPAANVLHQLVGGLRAAMGY
                     VGARNIGELQEKAEFIRVSGAGLRESHVHDVTITRESPNYPARE"
     gene            5614..6165
                     /locus_tag="VNY79_07740"
     CDS             5614..6165
                     /locus_tag="VNY79_07740"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF013742.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HWX72374.1"
                     /translation="MKRPPDPFAKIRNATSQHRAQHGCTAYPYDDGPLLSVLAATAHA
                     RRILELGTALGYTALSFAYGAPDSTVDTVDRDEEHVRLARDNIAAAALDHRITVHHGD
                     FAKVLSTLDPGYDLAFFDGGAPLPALHTGLRGLLRTGGLLITANLNHGGTAETVYKAL
                     FDGKSWRSALVDDEGETAISVKL"
     gene            6314..6736
                     /locus_tag="VNY79_07745"
     CDS             6314..6736
                     /locus_tag="VNY79_07745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015597133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MAPEG family protein"
                     /protein_id="HWX72375.1"
                     /translation="MSLAAVLLPLFVEVVLTFGLMLWMGVLRNDDYRSGTVKPQEIAL
                     REPKWPARTTQVANSFSNQFELPVLFYVLTILEWVTRHAGVLFVWLAWIFVIFRLLQA
                     YVHATNNNVRLRGAFYSVAAVALMIMWAIYIVQVLIGI"
     gene            6748..7389
                     /locus_tag="VNY79_07750"
     CDS             6748..7389
                     /locus_tag="VNY79_07750"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72376.1"
                     /translation="MPLDVRHPTAPHKKLKLPEWYVSDLMLDRALDAILRRVKLDRRH
                     DIPYLAGYSEDGKTIYIDRHMPRSFKLQGRTVDTDRFLILHEEVEKTLIDQLGLHYLH
                     AHQIATRAEQAAVRAAGVNWSGYDRFMQKYVKRIGDERLTKLPKDLDTKPYRDEHDDD
                     LLRRMLIAIDKGRVPKGFRGGQLRHAAREIRQYVRRHETLGARRTAALEQAMK"
     gene            7415..8716
                     /locus_tag="VNY79_07755"
     CDS             7415..8716
                     /locus_tag="VNY79_07755"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RsmB/NOP family class I SAM-dependent RNA
                     methyltransferase"
                     /protein_id="HWX72377.1"
                     /translation="MTPAARLSAAIEVFAEIEARRRPAADALKDWGLAHRFAGSSDRA
                     AIAGLVYDALRRKASAAWLIGEATPRAVVLGMLYRERGYDVAQIAGLCSGRFAPGPLT
                     EAELAALERGSLAGAPPPVEGDYPEWLDPHLARVFGGERVAEGGALASRAPLDMRVNT
                     LKGVREEVMPRLAHLHAAPTRWSPVGLRIRLPADAKSPAIHAEPSFRKGAIEIQDEGS
                     QLAALLAGARPGEQVIDLAAGAGGKTLALSAMMENRGQIYATDIDKRQLAPIHERIAR
                     AGARNIQVRTPRGAADDVLADLRGRADLVLIDAPCTGTGTWRRSPDAKWRVRPGALAE
                     RLKQQERLLDRAAALVRAGGRIAYVTCSVLAEENGDQVGAYLSRHPDFAVVPPREVAA
                     QALGDRAALFLHAALVSAEGLLMTPLRTETDGFFVAVMRKA"
     gene            8790..10337
                     /gene="guaA"
                     /locus_tag="VNY79_07760"
     CDS             8790..10337
                     /gene="guaA"
                     /locus_tag="VNY79_07760"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015667544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003922 - GMP synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006177 - GMP biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HWX72378.1"
                     /translation="MHDKILIVDFGSQVTQLIARRVREERVYCEIVPFQRAEAALREL
                     KPKGVILSGGPASVFDKEAPLAPMAIYEAGVPVLGICYGEQAMAHQLGGTVEGGHHRE
                     FGRAEVEVTKPSALYDGVWEVGQRYPVWMSHGDRVTRPPKGFAATGTSANAPIAMIAD
                     EARRFYATQFHLEVVHTPHGAALLRNFVRNIAGCAGDWTMRAFKDEAIDKIRRQVGKG
                     KVICGLSGGVDSAVAAVLIHEAIGDQLTCVFVDHGLLRLGEAEKVLALFRGHYNIPLL
                     HVDAAEDFLKALAGIEEPEAKRKTIGRLFIDVFDAEARKIGGAEFLAQGTLYPDVIES
                     VSFTGGPSVTIKSHHNVGGLPARMNMKLVEPLRELFKDEVRALGRELGLPDAFVGRHP
                     FPGPGLAIRCPGAITREKLDILRLADDVFIEEIRRAGLYDDIWQAFAVLLPVRTVGVM
                     GDFRTYDFVVGLRAVTSTDGMTADFYPFDMKFIGAVATRIINEVKGVNRVVYDVTSKP
                     PGTIEWE"
BASE COUNT         1789 a         3316 c         3586 g         1689 t
ORIGIN      
        1 atcgcgatcg atattctcga gatgaaaccc gtcgccggcg ttgagttcct gcaactcgat
       61 ttcctcgacg aaaccgcgcc ggcccggctc aaggccatgc tggacggcaa ggccgacgtc
      121 gtcctctccg acatggcggc caacgccacc ggccatcggc agaccgacca tctgcgcatc
      181 atggcgcttg ccgaggcggc ggcccatttc gcgcgcgagg ttctgtcgaa aggcgggagc
      241 ttcctgtgca aggtgctgca agggggaacc gaagcggcgc tgctcgccgc gctcaagcag
      301 gacttcgcca gcgtgaagca tgtcaagccg ccggcgagcc gcagcgattc ggcggagctt
      361 tatctgctcg cccgcggctt tcgcggcggt gcatcagcga cgacgtagcg acagaaggag
      421 agaacggaac ggcgctgtgc gcacccttgc agcgtgcgcg tgattggcct gctgcgggtc
      481 gcttcgccct cgatcactga acgctacgag gcgtgttcgc cgcagggggg tgcacgctgc
      541 cgcgcccgga aagctcggcg cccgcatagg gcggaaggcg cctgaagata aagcaagagg
      601 cagcggtcag cgcgccaatc accaggaatg ccggcgggaa gtcggcggcg ctcatcgctt
      661 cggcatgctt gagccgcagg gtgatctcga cgatgagcgc gccgacggcg acgccggtcg
      721 agagcgccag ttgctggacc acggagacga tcgtggtcgc acggctcatc aggggtggct
      781 cgatttcggc ataggcgagg gtgttgacgc tggtgaattg cagcgaacga aagaaaccgc
      841 cggtcagcag gatagcgacc atggccagaa acggcatacc gggcacgaag ctcgcgcagg
      901 cggcaagaaa cgcgccgctg atgatgctgt tgtagacgag aaccgggcga tagccgaagc
      961 gccggagcac gcgcgcgacc gccgccttca tgaacatcga accgagcgcg ctggtgaagg
     1021 tgataaggcc tgactcgaac ggcgtgaggt tgaacccgat ctgcagcagc agcggcagca
     1081 ggaagggcag ggcgccgatg ccgagcctga acaggaagcc accgaaaatg ctggcgcgga
     1141 agctcgcaaa cttgaacaga ttgagatcga ggattggcgc cgcggcgcgc cgggcatgaa
     1201 agaagtaggc gacgctcgac gcggcgccga cgccaaggag catcgcgacc acgccgctcg
     1261 gcaaaaaggt gagccccatg accgaaaggc cgaaggcaag tccgccgatg ccgaggccgg
     1321 aaaggacgaa accgacgaag tcgaaacggc ccggccgttc ggcgcggaca tccggaatgt
     1381 agcgtgtcgc catgatcaga ccggcgaggc cgatcggcac attgatgatg aaaatccagt
     1441 gccacgacgc gtaggtggtg atgaagccgc cgagcggcgg cccgcagatc gggccgatca
     1501 gcgccggtat ggtcaccagc gccatggcat taacgagcag cgtcttgtcg atgctgcgca
     1561 ccaggatgag gcggccgacc ggcgtcatca tcgccccgcc catgccctgg acgatccgcg
     1621 ccagcacgaa ttcctcgagc gagcgcgaga gcgcacagcc gatcgagccg aggacgaaca
     1681 cgccgatggc gaggcggaag acgtggcgcg cgccaaagcg gtcggcggtc cacccgctcg
     1741 ccgggatgca gatggcgagc gcgaggaggt aggaggtgac ggcgagcttg agcgccagcg
     1801 ggttggtgcc gaatgaccgc gcgatcgccg gcagcgaagt cgagatcacg gtcgagtcca
     1861 tgttctccat gaacagcgcg accgcgacga tgagcgggac gacgcggtcg tacgacctcg
     1921 gcggctgcgg catgtgcggc tagcggctgg cggcaggacc ggctttgagt cgccgcaagc
     1981 cttcggcagg ctgctggaac gtgggatcga gctcgatcgc cttgcggaag tcggcgatgg
     2041 cgccggcggt atccgcgagt cgctcgcgga tcaagccgcg cgtggaaaaa gcgcttgccg
     2101 aacgaccatt tagggcgatg gcgcggtcgg cgtctgccag ggcttcggtg gtgttgccgg
     2161 ccagatagcg cgcccaggcg cgattgtaga aggcgagcgc ggtctgcggc gctagctcga
     2221 tggcacgggt gtagtcggcg accgcgccgc tgagatcgag ccgctcgcgc cgggcattgc
     2281 cgcggttgac gtaagcgtcg gcggcgcggg gatcgagctt gatggcttgc tcgaaatccg
     2341 ccacggcgcg ctcattgtcg ttcttggcct gccaggcgct gccgcgattg ttgtacgcgg
     2401 cggcggtcgg attgagcttg atcgcctggt cgtagtcggc gatcgcgcga tcgaggtcgc
     2461 ccttgcgccg ccaggcgatg ccgcgattgt agaacgccga ggcgtagctc gggtcgatgc
     2521 tcaaggcgtc gttgtagtcg gcgatggcgc ggtcggcgtc gcccttgtcg tcgaaggcgt
     2581 tgccgcgatt gttgaaagcg acggaaaatc gcggattgag cttgatcgcc tggtcgtagt
     2641 ccgcgatggc gcgctcgaag tcgcgcttct gataataggc atagccgcgc tcgttgtagg
     2701 cgccggcatg ctgcggattg agcttcaacg cctcgctgag atcggcgatg gcgtggtcga
     2761 ggtcgccatc gcgccggtag gcgatgccgc gatcgtagta gatgcgggca ttcctggggg
     2821 cgaggcggac cgcctcgttg taatcggcga tcgcagcatt gcgctcgccc ttgtcgtcat
     2881 gggcgttgcc gcgattgttg taggcctcgg cgttggtcgg atcaaagcga atggcggcat
     2941 cgaaatcggc gatggcgcgg tcgtagtctc gtttctggta ggaaacgagg ccgcgattgt
     3001 cataggcgag tccgaactgg ggtgaaagct tgatggcgtg atcgaaatcg tcgacggcgc
     3061 gcgcgagatc ccctttggcg cgccaggcgt cgccgcggtt gttgtaggcg gccgccaggc
     3121 cgggatcgag gcgcagcgcc aaattgtagt cggcgacggc gcggtcagag tcgcccttct
     3181 cgaaccagac gatgccgcga ttgttgaacg cggcggcgtt cttcgggtcg agcttgatcg
     3241 cctggtcgta gtcggcaatc gcctggtcga ggtcgccctt gcgccggaac gccagtccgc
     3301 gattgaaata cgcggcggcg taagtggcgg acagccggat cgcctcgttg tagtcggcga
     3361 tggcgcggtc gaactcgcct ttgccgtcga gcgcattgcc ccgcgtcatg aacacgccgg
     3421 cgtcggttgc gtcgagcttg atcgccgcgt cgaggtcggc gatggcgccg tcgagatcgc
     3481 gctgggcgag ccgcacgctg ccgcggtcgg cataggcgcg ggcgtaagac gcgttgaggc
     3541 cgatcgcctc ggtgaagtca tcgagagcgc gcgcggcgtc gcccttggcg cgcatcgcca
     3601 gtccgcggtc gtggtgcagg atggcgagat tggctccctg gtagcggccc gattcgatca
     3661 gcaccgtgca cgcggtaatc cgctcgtcgg gggtggcgcg ccattgcccg gtgcaacgcc
     3721 gctcgtccgc gctctgggcg tgtgcgggcg cggcgagtgc cagcggcagg gccagcgcta
     3781 gcgcggccca agcggccaat cggcagggcg gcgatttgtg tggcattatg ggttacccgg
     3841 caaatggggc aggcaaagcg gcggcgccca ttctcgcttt gctctcattc gcttgcagcc
     3901 aatgtactct tctgtgtact ggcgggccaa gccgtgcggc gccatctatg cacatgggcg
     3961 ccggcgtgct aggaaccgcc gccaacccaa gcgggccatt gagtcggacg aaaggcgggc
     4021 agggcggagg ccccactcgc gtgagttcct ctttccaacc ggcacttccc gcccgcgagg
     4081 caagcccgca atccgtgcgg gcgcaagcgg agttggcgaa tgctcaagga ctatccgcgc
     4141 gagggcctca cgtttgacga cgtgctgctc aagcccagcc tgtcggacat cctgccctcg
     4201 gaagtggaca tccactcgcg catcacgcgc agcatcaagc ttaatattcc gataatcgct
     4261 tcggctatgg acacggtgac ggaagcacac atggcgatcg ccatggcgca ggcgggaggc
     4321 atcggcgtca ttcaccggaa cctggaaccc gccgtgcagg cggcgcaggt gcggcaggtg
     4381 aaaaaattcg aatccgggat ggtggtcaat ccggtcacca ttcatcccga cgcgacgctc
     4441 gccgatgcgc tcgagctaat gcaggagcac cacatctccg gcattccggt ggtcgagggc
     4501 ggggggaacg gtcgcgccgg caagcttgtc ggcattctca ccaaccgcga tgtgcgcttt
     4561 gccaccgaca agcagcaaaa agtgtccgag ctgatgacca aggacgggct ggtcacagtg
     4621 cgcgagaacg tcgatcaacg ggaggccaag cgcctcctgc atcagcaccg catcgagaag
     4681 ctcctggttg tcgacggtga tttccgctgc gtcggcctga tcacggtgaa ggacatcgaa
     4741 aaggcggtcg cgaacccgaa tgcgtgcaag gacgagcagg gcaggttgcg ggtcgccgcc
     4801 gcgaccaccg tgggcgaggc cggctatgcg cgcagcgaga agctcatcga ggccggggtc
     4861 gatctcgtcg tcgtcgatac cgcgcatggt cattcccggc gcgtgctcga ggccgtgagc
     4921 cgcatcaagc ggctgtcgaa tgcggtgcag gtggtcgccg gcaacatcgc taccgccgag
     4981 ggcgccaagg cgctgatcga cgccggtgcc gacgccatca aggtcgggat cggaccggga
     5041 tcgatctgca ccacccggat cgtcgccggc gtcggcgtgc cgcagctcac cgcgatcatg
     5101 gacacggtcg aggccgcgaa gagcaccgac acgccggtga tcgccgacgg cggcatcaaa
     5161 tattccggcg acctcgccaa ggcggtagcc gcgggcgccg agtgcgccat ggtcggttca
     5221 ttgcttgccg gcaccgacga aacgccgggc gaggtctttc tctatcaggg ccgctcttac
     5281 aagacctacc gcggcatggg ctcggtcggc gccatggcgc gcggctcggc ggaccgctac
     5341 tttcagcagg agatcaagga cacgctcaag ctcgtgccgg agggcgtgga gggccaagtc
     5401 ccctacaagg gcccggccgc caatgtcctg caccagctgg tcggtggact gcgcgcggcc
     5461 atgggctatg tcggggcaag aaacatcggc gagctgcagg agaaggcgga gttcattcgc
     5521 gtctcgggcg cgggtttgcg cgagagccac gtgcatgacg tcaccattac gcgcgagagc
     5581 ccgaattatc cggctcggga gtgaccgtcc gccatgaaac ggccgcccga tccgtttgcg
     5641 aaaatccgca acgccacgag ccagcaccgc gcgcagcacg gttgcacagc ctacccgtac
     5701 gatgacgggc cgttgctcag cgttctcgcg gcgaccgccc atgcccggcg cattctcgaa
     5761 ctcgggaccg cgctcggtta cacggccttg tcgttcgcct atggcgcgcc ggattccacc
     5821 gtcgatacag tcgaccgcga cgaagagcac gtgcggcttg cccgcgacaa catcgcggcc
     5881 gcggcgctcg accaccgcat cactgtgcac catggcgact tcgccaaggt gctttcgact
     5941 ctcgatcccg gctacgatct cgccttcttc gacggcggcg cgccgctacc ggcgctgcac
     6001 accggcttgc gcggcttgct gcgcaccggc ggcttgctga tcaccgccaa tctcaatcac
     6061 ggcggcaccg ccgagacggt gtacaaggcg ctgttcgacg gcaaatcctg gcgcagcgcg
     6121 ctggtcgatg acgaaggcga aacggcgatc agcgtcaagc tgtgacggtc cggtatttgg
     6181 cggcggtatt ttggcggcgg ctctgacaga tttggaaggt cccgtgcgac cagtctcacg
     6241 tggtgatacc ggtccactat ttggcggcgg caaacgcgcg tgttaggagt gcgcgcgcaa
     6301 ccgagggcca gatatgtcgc tcgcagccgt gctccttccg ctcttcgtcg aggtcgtcct
     6361 taccttcggg ctgatgctct ggatgggcgt gctgcgcaac gacgattacc gctccggcac
     6421 ggtcaaaccg caggaaatcg cgctgcgcga gccgaaatgg ccggcgcgca cgacgcaggt
     6481 ggcgaactcg ttttccaatc aattcgaact gcccgtgctg ttctatgtgc tcaccattct
     6541 cgagtgggtc accaggcatg cgggcgtgct cttcgtctgg ctagcctgga ttttcgtcat
     6601 cttccgcctg ctgcaggcct acgtgcacgc gaccaacaac aacgtgcggc tgcgcggcgc
     6661 cttctattcg gtcgcggcgg tggcgctgat gatcatgtgg gcaatctaca tcgtgcaggt
     6721 gctcatcggc atttgaggat cggcgccatg ccgctcgacg tccgccaccc gacagcgccg
     6781 cacaagaagc tcaagctgcc ggagtggtac gtctccgatc tcatgctcga tcgggcgctc
     6841 gatgcgatcc tgcgccgcgt caagctcgat cgccggcacg acattcccta tctcgccggc
     6901 tacagcgagg acggcaagac catctacatc gaccggcata tgccgcgatc tttcaaactc
     6961 caggggcgca cggtcgacac cgaccgcttt ctcattcttc acgaggaggt ggaaaagacg
     7021 ctgatcgatc agctcgggct gcattacctt cacgcccatc agatcgccac acgcgccgag
     7081 caggcggccg tgcgcgcggc cggcgtcaac tggagcggct acgatcggtt catgcagaag
     7141 tacgtcaagc gcatcggcga cgagcggctc accaagctgc caaaggatct cgatacgaag
     7201 ccgtaccgcg acgagcacga cgacgatttg ctgcgccgca tgctcatcgc gattgacaag
     7261 ggccgggtgc ccaagggctt tcgcggcggt cagttgcgtc atgccgcccg cgaaatccgc
     7321 cagtacgttc gccgccacga aacgctcggc gcccgccgga ctgcggcgct ggaacaggcg
     7381 atgaaatgac ggcggccgcc agcggggcgc cctcatgacg cctgccgccc gcctttccgc
     7441 cgccatcgag gtctttgccg agatagaggc gcgccggcgg ccggcggcgg acgcgctcaa
     7501 ggattggggg ctggcgcacc gctttgccgg ttcgtccgac cgcgccgcca ttgccggcct
     7561 cgtctacgat gcgctgcgcc gcaaggcgtc ggcggcgtgg ctcatcggcg aagcgacccc
     7621 gcgtgctgtg gtcctcggca tgctgtatcg cgagcgcggc tatgatgtcg cgcagatcgc
     7681 ggggctgtgc agcgggcgct ttgcgccggg accgctgacg gaggcggagc tagcggcgct
     7741 cgagcgcggc tcgcttgccg gcgcgccccc gcccgtcgag ggcgactacc cggaatggct
     7801 cgatccgcat cttgcgcgcg tctttggcgg ggagcgcgtt gccgagggcg gcgcgctcgc
     7861 cagccgggcg ccgctcgaca tgcgcgtcaa cacgctcaag ggcgtgcgcg aagaggtgat
     7921 gccgaggcta gcgcatcttc acgccgcgcc cacgcgctgg tcgccggtcg gcctgcgcat
     7981 ccggctcccg gccgatgcga agagcccggc gatccacgcc gagccgtcct tccgcaaggg
     8041 cgcgatcgaa atccaggacg aaggctcgca gcttgcggcg cttcttgcgg gagcacgccc
     8101 cggcgaacag gtcatcgatc ttgcggctgg cgccggcggg aagacgctgg ccctgtcggc
     8161 gatgatggag aaccgcggcc agatctacgc caccgacatc gataagcgcc agctcgcgcc
     8221 gatccacgaa cgcattgcgc gcgccggggc gcgcaacatc caggtgcgta cgccgcgcgg
     8281 cgcagccgac gacgtgcttg ccgaccttcg cggccgtgcc gatcttgtgc tcatcgacgc
     8341 gccttgcacc ggtaccggga cgtggcggcg cagccccgac gccaagtggc gtgtccgccc
     8401 gggtgcgctg gccgagcggc tgaagcagca ggagcggctg ctcgaccgcg ccgccgcgct
     8461 cgtgagggcg ggcggccgta tcgcctatgt cacgtgctcg gtcctggcgg aggaaaacgg
     8521 cgaccaggtg ggcgcgtacc tgtcacggca tcccgatttc gccgtcgtgc cgccccgcga
     8581 ggtcgcggcc caagccctcg gcgatcgcgc cgccctgttc ctccatgcgg cgctggtttc
     8641 ggcggagggc ctgctgatga cgccgctgcg caccgagacc gacggcttct ttgtcgcggt
     8701 catgcgcaag gcgtagcatg ccggtggaga ggagccgcgg cggacttgac ggcacgtgac
     8761 ctcggccgca catacgctcc tcgatacaca tgcacgacaa gatcctcatc gtcgatttcg
     8821 gctcgcaggt gacccagctg atcgcgcggc gcgtgcgcga ggagcgggtc tattgcgaga
     8881 tcgtgccgtt tcagcgggcg gaggcggcgc tgcgcgagct gaaacccaag ggcgtgatcc
     8941 tctccggcgg gccggcatcg gtgttcgaca aggaggcgcc gctcgcgccg atggcgattt
     9001 acgaggccgg cgtgccggtg ctcggcatct gctacggcga gcaggccatg gctcaccagc
     9061 tcggcggtac ggtcgagggc ggccaccacc gcgagttcgg acgcgccgag gtcgaggtga
     9121 cgaaaccgtc ggcgttgtac gacggcgtct gggaggtcgg ccagcgctat ccggtatgga
     9181 tgagccatgg cgaccgcgtc acgaggccgc ccaagggatt tgccgcgacc ggaacctcgg
     9241 ccaacgcgcc gatcgccatg atcgccgacg aagcgcgcag gttctacgcc acgcaattcc
     9301 acctcgaagt ggtgcacacg ccgcacggcg cggcgctgct gcgcaacttc gtgcgcaaca
     9361 tcgccggctg cgccggcgac tggaccatgc gtgcgttcaa ggacgaggcg atcgacaaga
     9421 tccgccggca ggtcggcaag ggcaaagtga tctgcgggct gtccggcggc gtcgactccg
     9481 cggtcgccgc cgtgctcatc cacgaggcga tcggcgatca gctcacctgc gtgttcgtcg
     9541 accacggcct gctgcggctc ggcgaggcgg agaaggtgct ggcgctgttt cgcggccact
     9601 acaacattcc gctcctacat gtggacgccg ccgaggattt cctcaaagcc ctggcgggca
     9661 tcgaggagcc ggaggcaaag cgcaagacca tcggcagatt gttcatcgac gtgttcgacg
     9721 ccgaggcgag gaagatcggc ggcgccgaat tccttgccca gggcacgctc tatcccgacg
     9781 tcatcgagag cgtgtcgttc accggcggtc cgtcggtgac catcaaatcg caccacaatg
     9841 tcggcggcct gcccgcgcgc atgaacatga agctcgtcga gcccttacgt gaattattca
     9901 aggacgaagt ccgcgcgctc ggccgggagc tcggcctgcc cgacgccttc gtgggccgcc
     9961 atccgttccc cggacccggc ctcgccatcc gctgccccgg cgccatcacg cgcgaaaagc
    10021 tcgacatcct gcgcctcgcc gacgacgtct tcatcgaaga aatccgccgc gccggcctct
    10081 acgacgacat ctggcaagcc ttcgccgtgc tcttgccggt gcgcaccgtc ggcgtcatgg
    10141 gcgatttccg cacctacgat tttgtcgtcg gcctgcgcgc ggtgacctcg accgacggca
    10201 tgaccgcgga tttttatcct ttcgacatga aattcatcgg cgcggtggcg acgcggatca
    10261 tcaacgaggt gaagggcgtc aaccgggtgg tttatgacgt gacgagtaag ccgccgggga
    10321 cgattgagtg ggagtgagcg gcgcgcaatg gaagagagaa ccagcgccta caaaacctga
//
LOCUS       DATMQB010000260         6171 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1333648, whole genome shotgun sequence.
ACCESSION   DATMQB010000260 DATMQB010000000
VERSION     DATMQB010000260.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6171)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6171)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6171
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1333648"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1955)
                     /locus_tag="VNY79_07765"
     CDS             complement(<1..1955)
                     /locus_tag="VNY79_07765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl/propionyl/methylcrotonyl-CoA carboxylase
                     subunit alpha"
                     /protein_id="HWX72379.1"
                     /translation="MFKRILIANRGEIACRIIKTARRLGIETVAVYSDADRDALHVEM
                     ADSAIPIGPAPAAQSYLVIDNIVAACRASGAEAVHPGYGFLSERAAFAEALAAAGIVF
                     IGPNPKAIAAMGDKIESKKAAARAKVSTVPGHLGVIGDDKQAVVIADEIGYPVMIKAS
                     AGGGGKGMRVAFNRGEVAEGFTRARSEAKSSFGDDRVFIEKFITDPRHLEIQVLGDKH
                     GNVIHLGERECSIQRRNQKVIEESPSPLLDAKTRARMGEQAVALAKAVGYDSAGTVEF
                     VAGQDRSFYFLEMNTRLQVEHPVTELVTGIDLVEQMIRVAAGEKLALQQSDIKLSGWA
                     VESRVYAEDPYRNFAPSIGRLVRYRPPAEGTHDGVTVRNDTGVAEGGEISLYYDPMIA
                     KLVTHAKTREQAIDAQADALDAFTIEGIRHNIPFLAAVMQHPRWRAGKLSTGFIAEEF
                     PQGFERVRPTGEVARAIAAVAVAIDHVLGERKRRISGQLNSAVTRERRRAIWLGGDEV
                     QADVARDCEAITVLFEDGNSHALSSNWVPGMPVWAGTLDGAALAMHVRMIPNGFELAY
                     RGIEVKTFVYTEREAHYARLMPAKVLSGSEKAVRSPMPGLVVSLAVAEGQEVKAGESL
                     AVVEAMKMENVLRAERDGIVKKIRVKPG"
     gene            2101..3921
                     /locus_tag="VNY79_07770"
     CDS             2101..3921
                     /locus_tag="VNY79_07770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HWX72380.1"
                     /translation="MRRQLILSAILASTATAALGQAPPARPHNVVLFVADGLRFRSVD
                     DVTAPTMAALAREGVSLRNSHALFPTFTMANASVMATGHMLGDTGNFSNTIYTGFQVP
                     SVNKTVTPFLESDPVLGDVDEHFSGNYLNEVTILRIAHDQGFSTAAIGKVGPTLIFDH
                     TDRTGTQTIIVDDATGSPKGIPLSPEMTERLKAASLPLVPPPRGASANYAGTTVANVV
                     QQDYFAAAVTRAILPMFKERDRPFVLMFWSRDPDGAQHFQGDSLNSLVPGINGPTSLA
                     AIRNADDDLARIRAALGELGLLETTDIIVVADHGFSTIAKESRTSPTVRTKFANTPAG
                     QLPLGFVALDLARALELPLIDPDDNYRTIGEGERSKFGNGLIGGDSNNPKVVVAANGG
                     SDLIYLPDGDKELAKRVIDVLLAQDYVSGIFVDTKLGKFPGTLTLDDIALEGAAVTPL
                     PAIAISFRSFDTVCGEPVQCTVEIADTILQQGQGMHGSFSRADTWNFMAMQGPDFKSR
                     YVDPAPASNADVGRTIAHLLRLDVSGRGKLIGRVLSETLPNGALPEFASRVVTSEPAV
                     NGLTTVINMQMVGDTRYFDAGGFPGRTVGLSATALPGASH"
     gene            complement(3929..4126)
                     /locus_tag="VNY79_07775"
     CDS             complement(3929..4126)
                     /locus_tag="VNY79_07775"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72381.1"
                     /translation="MQLGHDQHYPNVETLAAVIAHSQIVVEQQRRAAPRLPAGFDDVD
                     LAVLDWIAAEGRRLGRGLLPM"
     gene            4520..5179
                     /locus_tag="VNY79_07780"
     CDS             4520..5179
                     /locus_tag="VNY79_07780"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HWX72382.1"
                     /translation="MALQIGDTAPDFEADTTEGKIRFHDWIGSNWAVLFSHPKDFTPV
                     CTTELGTMARLKPEFDKRGVKILGLSVDPVDSHKKWSGDIKDVVGFAPNYPMVGDTDL
                     KISKAWGMLPAATAGTSEGRTPADNQTVRNVFVIGPDKKIKLVLVYPMTTGRNFDEVL
                     RVIDSLQLTAKHRVATPANWKQGEDVIITGAVTDDEAKKLYPDGWKTPKPYIRVVPQP
                     R"
     gene            complement(5299..>6171)
                     /locus_tag="VNY79_07785"
     CDS             complement(5299..>6171)
                     /locus_tag="VNY79_07785"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HWX72383.1"
                     /translation="YPDLPPIPVVPGYEVSGRVDAVGPGVEGDWTGRDVIAMTRFGGY
                     ADTVCVPVNQVFARPAGMSALEGAAVPVNYFTAWQLVVVMGGLKRNETVLVHSAGGGV
                     GIAATQIAKHLGAQVIGTASASKHAQLRTLGVDHLIDYRTEDFETRTREITSGRGVEL
                     ILDAVGGDSWKKGYRVLAPTGRLGAFGISAAATGKQRNLLGMFSLLAYTPWLAFNPLS
                     LMNANKGAFGVNLGHMWGEVDRIRGWAGQLFDLWAQGAIKPVVARSFRFDEAAQAHHF
                     IQDRRNIGKVLLVP"
BASE COUNT         1065 a         2102 c         1971 g         1033 t
ORIGIN      
        1 cccggcttga cgcggatctt cttgacgatg ccgtcccgct ccgcgcgcaa gacgttctcc
       61 atcttcatcg cctcgactac ggccaggctc tcgccggcct tgacctcctg gccttcggcg
      121 acggcaagcg agacgacgag ccccggcatc ggcgagcgca ccgccttctc gctgccggac
      181 agcaccttcg ccggcatcag ccgcgcgtag tgtgcctcgc gctcggtgta gacgaaggtc
      241 ttcacctcga tgccgcggta ggcgagttcg aaaccgttgg ggatcatgcg cacatgcatg
      301 gcgagcgcgg cgccgtcgag cgtgccggcc cagaccggca tgccgggaac ccagttcgag
      361 gaaagggcgt gactgttgcc gtcctcgaac agcacggtga tcgcttcgca gtcccgggcg
      421 acgtcggcct gaacctcgtc gccgccgagc cagatcgcgc gccggcgctc gcgcgtcacc
      481 gcgctgttca actgcccgga gatgcggcgc ttgcgctcgc cgagcacgtg gtcgatggcg
      541 acggcgacgg cggcgatcgc gcgggccacc tcgccggtcg ggcgcacacg ctcgaagcct
      601 tggggaaatt cctcggcgat gaacccggtg gagagcttcc cggcgcgcca gcgcgggtgc
      661 tgcatgaccg cggcgagaaa cgggatgttg tggcggatgc cctcgatggt gaaggcatcg
      721 agggcgtcgg cctgcgcgtc gatcgcttgc tcgcgcgtct tcgcgtgggt gacgagcttg
      781 gcgatcatcg gatcgtagta gagcgatatt tcgccgccct cggccacgcc ggtgtcgttg
      841 cgcacggtca cgccgtcgtg cgtgccttcg gccggcggac ggtagcgcac gaggcgcccg
      901 atcgacggcg cgaaattgcg atagggatcc tcggcgtaga cccggctctc gaccgcccag
      961 cccgagagtt tgatgtcgct ctgctgcagc gcgagcttct caccggccgc cacgcggatc
     1021 atctgctcca cgagatcgat gccggtcacc agctcggtca ccggatgctc gacctggagc
     1081 cgcgtgttca tctcaaggaa atagaagctg cgatcctgcc cggcgacgaa ttccaccgtg
     1141 ccggcgctgt cgtagccgac cgccttggcg agcgccaccg cctgctcgcc catcctggca
     1201 cgcgtcttcg cgtcgagcag cgggctcggc gattcctcga tgaccttctg gttgcggcgc
     1261 tggatcgagc actcgcgctc gccgagatgg atcacgttgc cgtgcttgtc acccagcacc
     1321 tggatttcga ggtggcgcgg atcggtgatg aacttctcga tgaacacgcg atcgtcgccg
     1381 aagctcgatt tcgcctccga gcgcgcgcgc gtaaaacctt cggcgacctc gcccctgttg
     1441 aaggcgacgc gcatgccctt gccgccgccg ccggcggagg ccttgatcat caccgggtac
     1501 ccgatctcat cggcaatgac gaccgcctgc ttgtcgtccc cgatcacgcc gagatggccg
     1561 ggaacagtcg agaccttggc gcgcgccgcc gccttcttcg actcgatctt gtcgcccatc
     1621 gcggcgatgg ccttcgggtt gggcccgatg aacacgatgc cggccgccgc cagcgcctcc
     1681 gcaaaggcgg cgcgctcgga gagaaatccg tagcccggat gcaccgcctc ggccccgctc
     1741 gctctgcagg cggcgacgat gttgtcgatg accaggtagc tttgcgccgc cggtgccggc
     1801 ccgatcggga tggcgctgtc ggccatttcc acgtgcagcg cgtcgcggtc ggcgtccgaa
     1861 tagacggcga ccgtctcgat ccccagccgg cgagcggtct tgatgatccg acacgcgatc
     1921 tcgccgcgat tggcaatcag tattcgtttg aacattaccg ttataaggtc ggcgggccgg
     1981 cccgctggct ttgcggcgtt gtcgcaaaaa tgtcaatcac gggccgcgtt gggcgtccgg
     2041 ccttccggcc ggtcgcctca tagtcgtaag ttgcatgcag atggaccgtg gagcatttga
     2101 atgcgtcggc agttaattct aagtgcaatc ctggcaagca cggcgacggc cgcattgggg
     2161 caggcgccgc cagcgcggcc gcacaatgtg gtgctgttcg tcgccgacgg cttgcgcttt
     2221 cgttcggtcg atgacgttac cgccccgacc atggcggcgc tcgcgcgcga gggcgtgagt
     2281 ctccgcaaca gccatgcgct gtttccaacc tttaccatgg cgaatgcttc ggtcatggcg
     2341 accggccaca tgctcggcga taccgggaac ttctccaaca ccatctacac gggcttccag
     2401 gtccccagcg tcaacaagac ggtgacgccg ttcctggaga gcgacccggt gctcggcgat
     2461 gtcgacgagc atttttccgg gaactacctc aacgaggtca cgatcctcag aatcgcccac
     2521 gaccagggct tcagcaccgc cgccatcggc aaggtcggtc caaccttgat cttcgatcac
     2581 accgaccgca ccggcacgca gaccatcatc gtcgacgacg cgaccggcag cccgaagggc
     2641 attccgctgt cgcccgagat gaccgagcgc ctcaaggcgg caagcctgcc gctcgtgccg
     2701 ccgccgcgcg gcgctagcgc caactacgcc ggcaccaccg tcgccaacgt cgtgcagcag
     2761 gactatttcg ccgccgcggt cacgcgcgcg atcctcccca tgttcaagga acgcgacagg
     2821 ccgttcgttt taatgttctg gtcgcgcgat cccgacggcg cccagcactt ccagggcgac
     2881 agcctcaatt cgctcgtgcc cggcatcaac ggcccgacct cgctcgccgc catccgcaac
     2941 gccgacgacg acctggcgcg catccgcgcc gccctcggcg agctcgggct cctcgagacg
     3001 accgacatca tcgtggtcgc cgaccacggc ttttccacga tcgcgaagga gagcaggacc
     3061 agcccgacgg tgcggaccaa attcgccaac acgccggcgg gccagcttcc gctcggcttc
     3121 gtcgccctcg atctcgcccg tgcgctcgaa ctgccgctga tcgatcctga cgacaattac
     3181 cggaccatcg gcgagggcga gcgcagcaaa ttcggcaacg gcctgatcgg cggcgacagc
     3241 aacaacccga aggtggtcgt ggctgcgaac ggcggctcgg acctgatcta cctgcccgac
     3301 ggcgacaaag agttggcgaa gcgggtaatc gacgtgctcc tggcgcagga ttatgtcagc
     3361 ggcatcttcg tcgacaccaa gctcggcaag tttcccggca cgctgacgct cgacgacatt
     3421 gcgctcgagg gcgccgcggt cacaccgctt ccggcgatcg cgatcagctt tcgctccttc
     3481 gacacggtgt gcggggagcc ggtgcaatgc accgtcgaaa tcgccgacac catcctccag
     3541 cagggccagg gcatgcacgg ctcgttcagc cgcgccgaca cctggaattt catggccatg
     3601 caggggccgg acttcaaatc gcgctacgtc gatccggcgc ccgccagcaa cgccgatgtc
     3661 ggccgcacga tcgcccacct gctgcgtctc gacgtgagcg gaagaggcaa gctgatcggc
     3721 cgcgtgcttt cagaaacatt gccgaatggc gcattgcccg agttcgcaag ccgcgtcgtg
     3781 acttcggagc cggccgtcaa cgggctcacg accgtcatca acatgcagat ggtcggcgat
     3841 acgcgctatt tcgacgctgg gggatttccc ggccgcaccg tcggcctgtc ggccacggcg
     3901 ctgcccggtg cttcacactg agtgcggatt acatcggcaa gaggccgcgg ccgagacgcc
     3961 ggccctcggc ggcgatccag tcgagcacag caagatcgac gtcatcaaac ccggcgggca
     4021 agcgcggcgc tgctcggcgt tgctgttcca ccacgatctg cgaatgcgcg atcacggcgg
     4081 cgagcgtttc gacgttcgga tagtgctggt cgtggccaag ctgcatcggc gcctccggca
     4141 cgcttcgcca actgcggcaa ccgcgcgcgg ttccatcgaa atgagcccct gcctcgcgga
     4201 accaccgagg cggcccagac agtcgtatgg gaggctggcc gcggaaaggc ggcgatgcgg
     4261 caaagtcggg gcacttttcc gtggccgatc aagcctcggt gaggtctggg cgtcgaccgg
     4321 cgggcgcaag acagccggcc agtcgccaga agaatcttcc atagatgagc gggcaacgac
     4381 gcaattcttc tttgtctctc gccgaattca aggaaatgat gctcagtaga aggcctagtt
     4441 ttgccggcct ttgagggcta tgtaacggct gaaattctat cccgaaacat taagacgagc
     4501 tcacgcggag gaggtttcca tggcgctcca gattggcgat accgcccctg acttcgaggc
     4561 cgataccacc gaaggcaaga tccgtttcca cgactggatc ggcagcaatt gggccgtact
     4621 gttctcccat cccaaggatt ttacgccggt ctgcaccacc gaactgggca ccatggcccg
     4681 cctcaagccc gagttcgaca agcgcggcgt caagattctc gggctttcgg tcgacccggt
     4741 cgacagccac aagaagtggt ccggcgacat caaggacgtg gtcggcttcg ccccgaacta
     4801 tcccatggtc ggcgacaccg acctcaagat ctccaaggct tggggcatgc tgccggccgc
     4861 gaccgccggc acctcggaag gacgcacccc cgccgacaat cagacggtgc gcaacgtgtt
     4921 cgtgatcggc ccggacaaga agatcaagct ggtgctcgtc tacccgatga ccactggccg
     4981 caatttcgac gaggtgctgc gcgtcatcga ttcgctgcag ctcaccgcca agcaccgggt
     5041 ggcgacgccg gcgaactgga aacagggcga agacgtgatc atcaccggcg cggtcaccga
     5101 cgacgaggcg aagaagctct atccggacgg ctggaagacg ccgaagccct atatccgcgt
     5161 ggtgccgcag ccgcggtagt gcagcgtgcg ggcgccagcc cgcgtccgga atgaccacac
     5221 gcagagcgcg gcttcggccg cgctcttgct tcgagcacgc gggtaaactt cgactgccgc
     5281 ggacacgtca gagccgcgct acggcaccag gaggaccttg ccgatgttgc ggcgatcctg
     5341 aatgaagtga tgcgcctgcg cggcctcgtc gaagcggaag ctgcgcgcga ccacgggctt
     5401 gatggcgcct tgcgcccaca gatcgaacaa ttgaccagcc cagccgcgga tgcggtcgac
     5461 ctcgccccac atgtggccga gattgacgcc gaaggcgccc ttgttcgcgt tcatcagcga
     5521 cagcgggttg aaggcaagcc atggcgtgta cgcgagcagc gagaacatgc cgagcaggtt
     5581 gcgctgcttg ccggtcgccg ccgcggaaat gccgaacgcc cccaaccgtc cggtcggcgc
     5641 caggacgcga tagcccttct tccacgagtc gccgccgacg gcgtcaagaa tgagctcgac
     5701 cccgcggccg ctcgtgatct cgcgcgtgcg cgtctcgaaa tcctccgtgc ggtagtcgat
     5761 gaggtggtca acgccgagcg tccggagttg cgcgtgctta ctggcggagg ccgttccgat
     5821 cacctgggcg ccaaggtgct tggcgatctg cgtcgcggcg atgccgacgc cgccgcccgc
     5881 cgaatgcacg agaacggtct cgttgcgctt gaggccgccc atgaccacga caagctgcca
     5941 ggcggtgaag tagttgacgg gaacggcggc gccctccaag gccgacatgc ctgccgggcg
     6001 cgcgaacacc tgatttacgg ggacgcagac cgtgtccgca tagccgccga agcgcgtcat
     6061 ggcgatgacg tcgcgtccgg tccagtcgcc ctcgacgccc gggccgacgg cgtcgacccg
     6121 gccgctcacc tcgtagccgg gcacgaccgg aatcggcggc aggtcgggat a
//
LOCUS       DATMQB010000261         8905 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_713338, whole genome shotgun sequence.
ACCESSION   DATMQB010000261 DATMQB010000000
VERSION     DATMQB010000261.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8905)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8905)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8905
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_713338"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(542..1531)
                     /gene="dhaK"
                     /locus_tag="VNY79_07790"
     CDS             complement(542..1531)
                     /gene="dhaK"
                     /locus_tag="VNY79_07790"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006325220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004371 - glycerone kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HWX72384.1"
                     /translation="MKKLINDAHGVIDESLAGFCRAHADIVVMGEGGLFVKRRLLKQG
                     KVALVSGGGSGHEPLHAGFVGRGMLDAACPGQVFTSPTPDQMLAAAEAVDTGAGVLFI
                     VKNYEGDVMNFDMAREMSNKVIATVVTNDDVAVEKSSYSTGRRGVAGTLIVEKILGAA
                     AEEGRDLETLRAIGESINARTRSMGVALSSCTVPAAGKPTFDIGEDEMEFGVGIHGEP
                     GRRRVKLMRADAIATEMVTAILGDLGMQTRAEAILLVNGFGGTPLMELYLMYGIARRL
                     IEAADITVERSLVGNYVTSLEMAGCSVTVSILDGETKRLWDAPVHAPALRWGA"
     gene            complement(1557..1976)
                     /locus_tag="VNY79_07795"
     CDS             complement(1557..1976)
                     /locus_tag="VNY79_07795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72385.1"
                     /translation="MISTESAAPSADWIAAYKHILQDVLDRRPSGMRQRLAEALGKNR
                     SFITQISNPAYQTPIPVQHLHRIIEMCHFSAREREQFLHAYHQAHPRRLQMLQEREKS
                     RRVTIMLPDLGSDSKNRRLDALVSEFADKIGRLLLAP"
     gene            complement(1973..3835)
                     /gene="ptsP"
                     /locus_tag="VNY79_07800"
     CDS             complement(1973..3835)
                     /gene="ptsP"
                     /locus_tag="VNY79_07800"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019862864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008965 - phosphoenolpyruvate-protein
                     phosphotransferase activity [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HWX72386.1"
                     /translation="MLIRDTVGLHARPSVKLTKLAKRFAAQVDLGLSPEGPWIDAKSI
                     VKVMAAKAPKDSTIYFRAEGTDAEAAVQALARLVEEGFEEGAKLANGMLELEGQPAAP
                     GLAVGVLVCLSKSVDGDRAIGTPDEERQALIDALASARAALTGLSADMADSQAEDILA
                     FQFALLEDDALTAPALAMVEGGRPAHEAWNAALDAELASYDLASDAYFRGRAADLRDL
                     RDRVLRQLTGEAEEVLPAGAIIAAEDMPPSRFLSTDWRGGGLVLERGSPTSHVAILAR
                     SRAVPMIVGVRIAELQTGQETLLDGDSGVLILDPDAATRLAFDERRAAQTKRRREEAV
                     WRGAPAITGDGERVQVMINVADPAELNDLDPAESDGIGLVRTELLFHGRERLPDEEEQ
                     FASYRRLLEWAGPRPVTIRTLDAGGDKPIPGLTRSGETNPFLGVRGVRLSLRRPDVFR
                     VQLRALARAAPAGNLKVMIPMVTTAEEMRRCGALLNEAVAGLRGEGRKAELPPLGMMV
                     EVPAAALSIEDFDVDFYSIGSNDLLQYVTAASRDDPELAELARPSRALLSLVRAVVDR
                     ARSTGREVSLCGDLGGDPKHIPALLDQGLRTLSVAPAALASVKATIARYRRTTP"
     gene            complement(3872..4264)
                     /gene="dhaM"
                     /locus_tag="VNY79_07805"
     CDS             complement(3872..4264)
                     /gene="dhaM"
                     /locus_tag="VNY79_07805"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047324 - phosphoenolpyruvate-glycerone
                     phosphotransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase phosphoryl donor subunit
                     DhaM"
                     /protein_id="HWX72387.1"
                     /translation="MSGNVGIVIVSHSPDVARGTADMVRQMVGQEVPLGWCGGDPGGG
                     LGTNVEAILAAIQAAWSEQGVAILVDLGGAETNSEMAIEMLPEIRRGRVVVCNAPIVE
                     GAVMAATEAASGAPLDAVRRTAEELTPG"
     gene            complement(4261..4875)
                     /gene="dhaL"
                     /locus_tag="VNY79_07810"
     CDS             complement(4261..4875)
                     /gene="dhaL"
                     /locus_tag="VNY79_07810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014492577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004371 - glycerone kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006071 - glycerol metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaL"
                     /protein_id="HWX72388.1"
                     /translation="MIVDSDTTKLLIETVARRVIASAQELTELDRAIGDGDHGINMER
                     GFEAVLAQVDQLAAQGLANALIGVGTTLVLKVGGASGPLYGTLFIALGKAWPAEATRE
                     QVTEALARALEAVKARGKSDLGQKTMLDVLGPVLAVVREGGQDLPSRLRTTAAAAASA
                     TVPMKAIRGRASFLGERSIGHMDPGARSSALLVEAVADVMEGRF"
     gene            complement(4886..5911)
                     /locus_tag="VNY79_07815"
     CDS             complement(4886..5911)
                     /locus_tag="VNY79_07815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018242449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX72389.1"
                     /translation="MADLKLKEVSKRFGDVEAVRDLSLSVADGEFVVLLGPTGAGKTT
                     TLRVIAGLERPDMGDVFIDGRIVTGQPPAQRDVAYVFQQYSLYPHLTVYDNLAFPLRS
                     PARRLNERDVRRRVQQVAALLRIEQKLGSRATHLSGGEMQRVAIGRALVREPAAYLMD
                     EPLSSLDAKLRADLRVELKRIQLEVGGTILYVTHDQIEAMTMADRIGVIQHGRLVQVG
                     TPREIYEHPCNAYVAGRLGMPPINLIPAGILRTEAAPSGAHTVGARTEHLRISAANGH
                     DPVAEVRWIEHLGDQNHVHLILAGQALVTLADPRQPLRAGDRVSLELADPLYFDASGK
                     RLDINWR"
     gene            complement(5904..7001)
                     /locus_tag="VNY79_07820"
     CDS             complement(5904..7001)
                     /locus_tag="VNY79_07820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX72390.1"
                     /translation="MAEIKLESLSKVFGSFAAVRELTLTVADGSFFVVLGPSGCGKTT
                     TLRMIAGLELPSSGRILLDGDDVSGRRAAARDIAFVFQLFALYPHMNVRRNIGFPLRC
                     QNLPRAAVRGRVEETARLLRIDHLLDRRVGGLSGGDRQRVALGRAIVRTPKAFLMDEP
                     LGALDAEFRRLMCGELRELHNRIGATTVYITHDQVEAMAMADCIAVMNGGALEQVGLP
                     QEIYDRPRTMFVADFLGTPPMNFLEFAGAVRRGDRYVRVNGSAIGIPELREEGAEGAL
                     ALGVRPEHVSLDDASSLRGRVFAVEYLGTTQIVTIATSHGQVKARLPSSAPARIGDMV
                     GLSLDHRRLSVFDATSGRALQTALHEGAALG"
     gene            complement(7008..7211)
                     /locus_tag="VNY79_07825"
     CDS             complement(7008..7211)
                     /locus_tag="VNY79_07825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004434243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72391.1"
                     /translation="MIDQAEQTASTRSKWLRRGPWENAAMALIALGVIMLMQPISIGL
                     YGYSFVTILAGTLGFVVVSHFPE"
     gene            complement(7208..8161)
                     /locus_tag="VNY79_07830"
     CDS             complement(7208..8161)
                     /locus_tag="VNY79_07830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018074535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0008643 - carbohydrate transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HWX72392.1"
                     /translation="MTGATTAHSIVAASPRSKTIAAVLVIAYAVVTIVPLLWIFLTGF
                     KTPPDSIAYPPKVWFKPSIEGYVNLFTTRTRQTPEFLASLPAPDTWYERLVRSRNMVI
                     AGPSKVVPRFVNSLVIGFGSTFLAVFLGTLAAYAFSRFRVPLADDLLFFILSTRMMPP
                     IAVAIPIYLMFRQFGLTDTHLGMILLYTAVNVSLAVWLLKGFIDEIPREYEEAAMVDG
                     YTRLHAFFKVVLPQAATGIAATAIFCLIFAWNEYAFAVLLTSGEAQTMPPFIPFIIGE
                     GGQDWPAVAAATTLFFIPIVCFTIALRRHLLRGITFGAVRK"
     gene            complement(8158..>8905)
                     /locus_tag="VNY79_07835"
     CDS             complement(8158..>8905)
                     /locus_tag="VNY79_07835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HWX72393.1"
                     /translation="PIRYIGLDNYRSILSDPDVWQAMQTTAHFVFWSISLEVLLGFGL
                     ALLINRQFRGHSLWTTVILLPMMLSPAVVGNFWTFLLQPQIGLFNYVVAFFTGVDPSS
                     FQMIGDVNLAPWSIVLVDTWMWTPYVMLICLAGLRSIPDYIYEAAEVDRASPWRQFWS
                     ITLPMVLPFLMLAILFRAIENFKMFDMVNLLTSGGPGSTTEVASITLKREAFEKWRTG
                     YSSAFAIILFVTVFGAASIYVKALNRVKQR"
BASE COUNT         1630 a         2946 c         2855 g         1474 t
ORIGIN      
        1 ggctcacggc agttgcctaa tatctgcata gactggcggg catcccaagc ctccactcca
       61 cgccgccagg tccggtcggt gcctgcattt cggaaaatgc gcgtgcaagc ggcaactcgt
      121 accttcacgg acatcagcgg atctcgaggg cattgccttg ccgacaaatc cgatcgtccc
      181 gacagatctc aaacgttgcc gagacgggcg cacagggacg ccgccagatg ctcgaagtcg
      241 ccgtagccga tctcgaactc gaggccggct ttgtcctgag ccgcccgagg catgccgcat
      301 atcgctcgtc gagcgcgtcg acgcgaacga tcggcgttcc gggcttcacg aaggcggcgt
      361 gaggtcgtgt cgcgcgcgcg cccgggtgca ccgggcccac cgttgacggg ggaccgaggg
      421 gctcgaagcc cgctccctcc accactctga agggactggt caaagggtcg gatccggtct
      481 cgcaacgctc agggttggcc gcgggaccgc ggccagggca caacactggc tgcgacgggg
      541 tttaggcccc ccagcgcagc gctggtgcat gcaccggagc atcccacaga cgttttgtct
      601 cgccgtcgag tatcgacacg gtcaccgagc agcccgccat ctccagcgag gtcacatagt
      661 tgccaacgag agagcgctcc acagtgatgt ctgcggcctc gatcagccgg cgcgcgatac
      721 catacatgag gtagagctcc atcagcggtg tgccgccgaa gccattgacg agcagaatgg
      781 cctcggctcg cgtctgcatg ccaagatcgc ccaggatcgc cgtcaccatt tcagtggcga
      841 tggcgtcggc gcgcatcagc ttgacccgac gacggccggg ctcgccatgg atgccgacac
      901 cgaactccat ctcgtcctcg ccgatgtcga aggtcggctt ccccgccgcc ggaaccgtgc
      961 agctcgacag cgccactccc atcgagcggg tgcgcgcgtt gatgctctcg ccgatcgccc
     1021 tcaacgtctc gaggtcccgg ccctcctccg ccgccgcgcc aaggatcttt tcgacgatga
     1081 gcgtgcccgc gacaccgcgc cggccagtgg agtaggacga cttttcgacc gcaacgtcgt
     1141 cattcgtcac caccgtcgcg atgaccttgt tcgacatctc gcgcgccatg tcgaagttca
     1201 tcacgtcgcc ttcgtagttc ttcacgatga acagcacacc ggcgccggtg tctacggctt
     1261 cggcggcggc aagcatctga tccggcgtgg gcgaagtgaa gacctgcccc ggacaggcgg
     1321 catcgagcat tccgcgaccg acgaagcccg catgcagcgg ctcgtgcccg gagccgccgc
     1381 ccgagaccag cgccaccttg ccctgcttca agaggcggcg cttcacgaag agcccgccct
     1441 cgcccatcac gacgatgtcg gcgtgcgctc ggcagaatcc cgcaaggctc tcatctatga
     1501 cgccgtgcgc atcgttgatg agcttcttca tgggtggcgt tctccccctc cgcgctctac
     1561 ggtgccaaca ggagtcgtcc gatcttgtcg gcgaactcgc tgaccaaggc gtcgagccgt
     1621 cggtttttgc tgtcactgcc gaggtccggc agcatgattg taacccgccg gcttttttcg
     1681 cgctcctgca acatttgcag gcggcgcgga tgcgcttggt gataggcgtg cagaaattgc
     1741 tccctctccc gagcggagaa gtggcacatt tcgatgatgc ggtggagatg ctggaccggg
     1801 atcggcgttt ggtacgccgg gttcgaaatt tgcgtgatga agctgcggtt cttgcccagc
     1861 gcttcggcga gacgctggcg catgccggag ggacggcggt ccaaaacatc ctgcaggatg
     1921 tgcttgtaag cagcaatcca gtccgccgac ggtgccgcgg attccgtaga gatcacggcg
     1981 tcgtcctccg gtaccgggcg atcgtcgctt tgaccgaagc gagggccgcg ggcgcaaccg
     2041 agagcgtccg caggccctgg tcgagcaagg cagggatgtg cttgggatcg ccgccgaggt
     2101 cgccgcagag gctgacctct cgcccggtcg accgagcccg atcgacaacg gctctaacaa
     2161 ggcttagcag agcgcgcgag ggccgggcga gttcggctag ttccgggtcg tcgcggcttg
     2221 ccgccgtcac atactggagg agatcattgc tgccgatcga gtagaagtcg acatcgaagt
     2281 cctcgatcga cagcgccgcc gccggcacct cgaccatcat gccgagaggg ggcaattctg
     2341 ccttgcgccc ttcgccgcgc aaaccggcaa cggcttcgtt caacagcgca ccgcagcggc
     2401 gcatttcttc cgccgtggtc accatcggga tcatcacctt caggtttccc gcaggcgcgg
     2461 cacgggcgag cgcgcgaagt tgcacccgga agacatccgg ccggcgcagg gatagccgca
     2521 cgccgcggac gccgagaaac gggttggtct ctcccgaccg cgtcagaccg gggatcggct
     2581 tgtcgccgcc ggcgtcgagc gtgcggatcg tcaccggccg agggccagcc cattcgagaa
     2641 ggcggcggta gctcgcgaat tgctcctcct catccggcag ccgctcgcgg ccatgaaaca
     2701 gcaactccgt gcgcaccagc ccgatgccgt cgctctcggc cggatcgaga tcgttcagct
     2761 ccgcaggatc ggccacattg atcatgactt gcacgcgttc gccatcgccc gtgatcgccg
     2821 gtgctccccg ccaaacggcc tcctcgcggc gacgcttcgt ctgcgccgcg cggcgctcgt
     2881 cgaaggcgag gcgcgttgcc gcgtcgggat cgagaatgag caccccgctg tcgccatcga
     2941 gcagcgtctc ctggccggtc tgcagctcgg caatgcgcac gccgacgatc atcggaacgg
     3001 cgcggctcct ggcgagaata gcgacatggc ttgtgggact gccacgctct agcacgagcc
     3061 cgccgccgcg ccaatcggtc gagagaaatc gtgacggagg catatcttcc gccgcgatga
     3121 tcgctccggc gggcagcact tcctctgcct cgccggtgag ttggcgcagc acgcgatcgc
     3181 ggagatcgcg cagatctgcc gcccggccgc ggaaataggc atcgctggcc aggtcgtagg
     3241 aggcgagttc ggcgtcgagc gccgcgttcc atgcttcgtg cgccggcctt ccgccctcca
     3301 ccattgcaag cgccggggca gtcagcgcat cgtcctcgag aagcgcgaac tggaaggcga
     3361 gaatgtcctc tgcttgcgag tccgccatgt cggccgagag gccggtcaga gcggcacgcg
     3421 ccgaggcgag cgcgtcaatc agcgcctgcc gttcttcgtc cggcgttccg atcgcgcgat
     3481 caccgtccac cgacttgctc aggcagacga gcacacccac ggccaggccg ggcgcggcgg
     3541 gctggccctc gagctccagc atgccattgg cgagcttggc gccctcctcg aaaccttctt
     3601 cgacgagcct cgcgagcgct tggacggcgg cttcggcatc ggtgccctcg gcgcgaaagt
     3661 agatggtcga gtccttcggt gccttcgccg ccatgacctt gacaatgctc ttggcgtcga
     3721 tccacgggcc ctccggagac agcccgagat cgacctgcgc ggcgaacctc ttggcgagct
     3781 ttgtcagctt gaccgatggt cgagcgtgaa ggccgaccgt gtcccgaatc aacaccgatg
     3841 cgctcgcccg tatggtcatc aatgcaccgc ctcagcccgg cgtcagttct tcggcagtgc
     3901 ggcgaacggc gtcgaggggc gcgcctgagg ccgcctcggt cgccgccatt acggcaccct
     3961 cgacgatcgg cgcgttgcac accacgacac ggccgcgccg tatctcgggc agcatctcga
     4021 tcgccatctc gctgttggtc tcggcgcccc cgaggtcgac caggatggcg acaccctgct
     4081 cggaccaggc ggcttggatg gccgcgagga tggcctcgac gttggtgccc aacccaccgc
     4141 cggggtcgcc gccgcaccag ccgaggggca cctcctggcc gaccatttgc cggaccatgt
     4201 ccgcggtgcc ccgcgccaca tccggcgaat gcgagacgat gacgatgccg acgttcccgc
     4261 tcaaaatctg ccctccatca catctgcaac cgcctcgacc aggagcgcgg aagaccgtgc
     4321 tccgggatcc atatgaccga tgctccgctc gcctaagaac gacgccctgc cgcggatggc
     4381 cttcatcggg accgtcgctg acgctgcggc agcggccgtc gtccgcagcc gcgagggcaa
     4441 atcttggccg ccctcgcgca cgaccgcgag caccggcccg agcacgtcga gcatggtctt
     4501 ttggccgaga tcggacttgc cgcgggcttt gaccgcttcg agcgcgcggg ccaatgcttc
     4561 ggtgacctgc tcgcgcgtcg cctctgcagg ccacgccttt ccaagtgcga tgaaaagggt
     4621 gccatagagc gggcctgagg cgccgccaac cttcagcaca agcgtggtgc cgacacctat
     4681 caacgcgttg gcgagaccct gggcggcaag ctgatcgacc tgcgccaaga ccgcctcgaa
     4741 gccgcgctcc atattgatcc cgtggtcgcc gtcgccgatc gcccgatcga gttcggtcag
     4801 ctcttgggca gacgcgatta cgcgccgtgc cacggtctcg atcagcaact ttgtcgtatc
     4861 actgtcgaca atcatgcgcc tcggctcacc gccagttgat gtccaggcgc ttgccgctcg
     4921 cgtcgaaata gagcgggtca gcaagctcga gtgaaacgcg atctccggcc ctgagcggtt
     4981 ggcgcgggtc cgccaacgtc acgagcgcct gcccggcaag gatgagatgc acatggttct
     5041 gatcgccgag gtgctcgatc cagcgaacct cggcgaccgg gtcgtgaccg ttcgcggcgg
     5101 agatcctcag atgctcggtg cgggctccga ccgtgtgagc gcccgagggc gcggcctctg
     5161 tccggagaat gccggccggg atcagattta ttggcggcat tccgagccgg ccggcgacat
     5221 aggcattgca tggatgctcg taaatctccc gcggcgtgcc aacttgcacg agccgtccgt
     5281 gctggattac gccgatccgg tcggccatcg tcattgcttc gatctggtcg tgcgtgacgt
     5341 agagaatcgt tccgcccacc tcgagctgaa tgcgcttgag ctcgaccctg aggtcggcgc
     5401 gcagcttggc atcgagcgag gataacggct catccatcag ataggcggcc ggctcgcgca
     5461 ccagcgcgcg gccgatggcg acgcgttgca tttcgccgcc cgagagatgg gtggcgcggc
     5521 tgccgagctt ttgctcgatg cgcagcagcg cagccacctg ctgcactcgg cgccggacat
     5581 ccctctcgtt gaggcggcgg gccggtgagc gcagcggaaa ggcgagattg tcgtataccg
     5641 taaggtgcgg ataaagcgag tattgctgga agacgtaggc aacgtctcgc tgcgctggcg
     5701 gctggccggt cacgatccgg ccatcgatga agacgtcgcc catatcgggc cgttcgaggc
     5761 cggcgatcac ccgcagggtt gtcgttttgc cggcgccggt cggccccagc agcacgacga
     5821 attcaccgtc ggcgaccgag agcgaaagat cgcgcaccgc ttcgacgtcg ccgaagcgct
     5881 tgctgacttc tttcaacttc agatcagcca agggcagccc cctcatggag agccgtctgc
     5941 agcgcccggc cgctcgtcgc gtcgaacacc gagaggcggc ggtgatccag gctcagcccc
     6001 accatgtcgc cgatgcgtgc cggggcgctc gacggtagcc gtgccttcac ctggccgtgc
     6061 gaagttgcga tggtgacaat ctgggtcgtg ccgagatact cgaccgcgaa gacccggccg
     6121 cgcagcgagg acgcgtcatc gagcgagacg tgctccggcc gaacgcccag cgccagcgca
     6181 ccttctgccc cctcctcgcg gagctccgga ataccgattg ccgacccgtt gacccgcacg
     6241 tagcggtcgc cgcgccgcac cgctcccgcg aactcgagga agttcatcgg cggcgtgccg
     6301 agaaaatcgg cgacgaacat cgtgcgcggc cgatcataga tttcctgcgg caatcccacc
     6361 tgctccagcg cgccaccgtt catcactgcg atgcagtcgg ccattgccat ggcctccacc
     6421 tgatcatgcg tgatgtagac cgtggtcgcg ccgatgcgat tgtgcagctc gcgcaattcg
     6481 ccgcacatga gccggcgaaa ctcggcatcg agcgccccta gcggctcgtc catcaaaaag
     6541 gccttcggcg tacgcacgat ggcgcgcccg agagcgacgc gctggcggtc accgccggac
     6601 aagcccccga cccggcgatc cagcaaatga tcgatgcgga gcaggcgcgc cgtttcctca
     6661 acccgcccgc gaaccgccgc acgcggcaga ttctgacagc gcagcgggaa gccgatattc
     6721 cggcggacgt tcatgtgcgg atagagggcg aagagttgga agacgaaggc gatgtcgcgc
     6781 gccgccgcac gccgaccgga gacgtcgtcg ccgtccagca ggatgcggcc cgagctcggc
     6841 agctccaagc cggcaatcat gcgcagagtg gttgtcttgc cgcagcccga gggccccagc
     6901 acgacgaaga aggacccgtc ggcgacggtc aaggtcagct cccgcaccgc ggcaaaggag
     6961 ccgaagacct tggacaggct ctcgagcttg atctcggcca tcttcgacta ttcgggaaaa
     7021 tggctgacga cgacgaagcc cagcgtaccc gcaaggatcg tgacgaagga gtagccgtat
     7081 aggccgatcg agatcggctg catgagcatg atcacgccga gggcgatgag cgccatcgcg
     7141 gcattttccc atggcccccg ccgcagccat tttgatcgcg tcgacgcggt ctgttccgcc
     7201 tggtcgatca ttttcgcacc gcgccgaagg tgatgccgcg caggagatgc cgccgcagcg
     7261 cgatcgtgaa gcacacgatc gggatgaaga acagcgtcgt ggctgcggcg acggcgggcc
     7321 agtcctgtcc gccctcgccg atgatgaagg gtatgaaggg cggcattgtc tgcgcttcgc
     7381 cgctcgtcag cagcaccgca aaagcatatt cattccaagc aaagatgaga cagaagatcg
     7441 ccgtagctgc gatgccggtc gcggcctgcg gcaacacaac cttgaagaag gcgtgaagcc
     7501 gcgtatagcc gtcgaccatc gcggcttcct cgtactcgcg gggaatttca tcgatgaacc
     7561 ccttgaggag ccacaccgcg agcgagacat tgacggccgt gtaaagcagg atcatcccga
     7621 gatgggtgtc ggtgaggccg aactggcgga acatcagata gatcgggatc gccaccgcga
     7681 tcggcggcat catccgcgtc gacaggatga aaaacagcag gtcgtcggcc agggggactc
     7741 tgaagcgaga gaacgcgtag gcggcgagcg ttccgaggaa cacggcaagg aaagtcgagc
     7801 cgaaaccgat caccagtgag ttgacgaagc gcggcaccac cttggacggc cccgcgatca
     7861 ccatgttgcg cgagcgcacc agccgctcgt accaggtgtc gggcgcgggc aggctcgcca
     7921 gaaactccgg cgtctgccgg gtacgcgtgg tgaaaaggtt gacgtatcct tcgatagaag
     7981 gcttgaacca caccttcggc ggataggcga tcgagtccgg cggcgtcttg aagccggtga
     8041 ggaaaatcca cagcagcggg acgatcgtca ccaccgcata ggcaatcacc aatactgccg
     8101 cgatcgtctt ggaccgcggc gacgccgcga cgatcgaatg ggcggtggtg gcgccggtca
     8161 tcgctgtttt acccgattga gcgccttcac atagatgctg gcggcaccga agacggtcac
     8221 gaagagaatg atcgcaaagg ccgaggagta gccggtgcgc catttctcga atgcctcgcg
     8281 cttcaaggtg atcgaggcga cttcggtggt cgagcccgga ccgcccgagg tcagcaggtt
     8341 gaccatgtcg aacatcttga agttctcgat ggcgcgaaac aggatcgcca gcatcaggaa
     8401 cggcagcacc atcggcaacg tgatcgacca gaattgccgc cacggcgacg cgcggtcgac
     8461 ctcggccgcc tcgtagatgt agtccggtat ggagcgcagg ccggcgaggc agatcagcat
     8521 cacatagggg gtccacatcc aggtatcgac cagcacgatc gaccaggggg cgaggttgac
     8581 gtcaccgatc atctgaaacg agctgggatc gacgccggtg aagaacgcaa cgacatagtt
     8641 gaagagcccg atctgcggct gtagcaggaa cgtccagaaa ttgcctacga ccgctggcga
     8701 cagcatcatc ggcagcagaa tcaccgtggt ccagagacta tgaccacgga actgacgatt
     8761 gattagcaga gcaaggccga aaccgagcag aacctcgagc gagatcgacc agaacacaaa
     8821 gtgcgccgtc gtctgcatcg cttgccagac gtcgggatcg ctcaagatgc tgcggtaatt
     8881 gtcgagaccg atgtaccgga tcggc
//
LOCUS       DATMQB010000262         3182 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1336554, whole genome shotgun sequence.
ACCESSION   DATMQB010000262 DATMQB010000000
VERSION     DATMQB010000262.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3182)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3182)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3182
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1336554"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..477)
                     /locus_tag="VNY79_07840"
     CDS             complement(<1..477)
                     /locus_tag="VNY79_07840"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004115387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HWX72394.1"
                     /translation="MKKIGFLSFGHWSPSPQSQTRSASDALLQSIDLAVAAEELGADG
                     AYFRVHHFARQLGSPFPLLAAVGAKTTRIEIGTAVIDMRYENPLYMAEDAGAADIIAG
                     GRLQLGISRGSPEQVIDGWRYFGYAPPEGMTDADMARNHTEVLLEVLRGEGFARPNP"
     gene            825..1205
                     /locus_tag="VNY79_07845"
     CDS             825..1205
                     /locus_tag="VNY79_07845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012591277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HWX72395.1"
                     /translation="MTSLDIRAALERHWAASDASDFETEHEIYCDDAILDYPQSGERI
                     RGRRQIQLSRTAQPNKKRFNVKRILGADDLWITEYVLTYDGQPSYVVSIMEFHGGQVA
                     HETQYFGDAFEPGPSRAQWVEPMR"
     gene            1423..2619
                     /locus_tag="VNY79_07850"
     CDS             1423..2619
                     /locus_tag="VNY79_07850"
                     /inference="COORDINATES: protein motif:HMM:NF013646.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent monooxygenase"
                     /protein_id="HWX72396.1"
                     /translation="MSSSDPILIVGGGLGGLTTALALAWRGRAARVLEGAPEFGAIGY
                     GIQFGPNVFHVFDRLGLREEVLAVADSPAALLMLDALDGKELIRIPTAALFRARFKHP
                     YIVVHRIDLHNVLLDACRQHDAIELVADAMVTGFEDRGECVALATADGRTFSGAAIVA
                     ADGLRSLFRAKLVGDGEPHPVGYAAHRSIVPMAELKADVPRDCVVLWGGPGFHIVHYP
                     LRHGTLFNVVAVFRTATHGEKGDAASHLAELQHSYREAQPAMRALLAMMEVGRRWQIG
                     YRDPVRRWHRGRVVLIGDAAHAPLQSLAQGACMAIEDGFCLAELIHASDGDFAAAFRR
                     FEAARLLRTARVQLESRAMWPFYHAEGIARDVRNATVADWDERYLFNCLAWLYDGAAL
                     PAAAGG"
     gene            2712..>3182
                     /locus_tag="VNY79_07855"
     CDS             2712..>3182
                     /locus_tag="VNY79_07855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003602499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HWX72397.1"
                     /translation="MAKHVAVLMGGWSAEREVSLRSGKACADALARVGYRVTAVDAGR
                     DVATVLSGLKPDVALNVLHGRPGEDGTLQGVLEILGIPYSHSGVLASALAMQKDYAKA
                     HFRAAGIPVAEDMVVSRIEAAKTHLMAPPYVIKPIAEGSSVGVFIVTEQHPHPPQ"
BASE COUNT          530 a         1027 c         1033 g          592 t
ORIGIN      
        1 cgggttgggg cgcgcgaagc cttcgccgcg cagcacctcg agcaatacct cggtgtggtt
       61 tctggccatg tcggcatcgg tcatcccctc gggcggggcg taaccgaagt agcgccatcc
      121 gtcgatcacc tgttcgggcg aaccgcggct gatgccgagc tgcagccgac cgccggcgat
      181 gatgtcggcg gcgccggcgt cctccgccat gtacagcggg ttctcgtagc gcatatcgat
      241 gaccgcagtg ccgatctcga tccgcgtggt cttcgcgccg acggcagcga gcagcgggaa
      301 gggcgagccg agctggcggg cgaagtgatg cacccggaag taagccccgt ccgcgccgag
      361 ttcctcggcg gcgacggcga ggtcgatcga ttgcagcagg gcgtcggaag ccgatcgcgt
      421 ctgcgactgc ggcgaaggcg accaatggcc gaatgagagg aagccgatct ttttcatgga
      481 cgtgcattgt gaaggatgag ttccggctgt ttagcctcaa aaacttaagc ttgaacaggc
      541 cactcgcgag ccgccgctgc gacaacgcgc tcggtctgac ggcgccggct tttcggccag
      601 tccgacgatg cgatcaaata cccgataaat gccacccatt cgcgcgtaac ggactacttc
      661 gcccgcgcgg tagggtccgt tgttggaccc aggtcggaca tcgcatcctg ccgattagtg
      721 ggagcaagcc cccatatcca ccctaccgtt gcggagccca ttcagactat gttcagtgag
      781 ctcaaactcc tctgacagct gcacatgcga tccaggtgat tttgatgaca agtctagata
      841 ttcgcgctgc tctcgaacgt cactgggctg catccgacgc gagcgacttc gaaacggaac
      901 atgagattta ttgcgatgat gcaatactcg attatccgca gtcgggagaa cgaatccgtg
      961 gcagacgaca aatccagctt tcacggaccg ctcagccgaa caaaaagcgg ttcaacgtta
     1021 aacgcatctt gggcgcagat gatctttgga tcacagaata tgtgcttaca tatgatggcc
     1081 agccgtcgta cgtggtcagc attatggagt ttcatggcgg acaagtggcc catgaaaccc
     1141 aatacttcgg tgatgcgttc gagccggggc catcacgtgc acaatgggta gagccaatgc
     1201 gctagagatg gccgccggat gcacgatcct gcttgtggct tggtcccgca gctcgtctgc
     1261 gcgttgtgag ttcgagaccc gccgcggcat atcgctcata caatgtcgcc ctttggcagc
     1321 actttgcgga cgtgacgacg gtattcggcg atgcccgttt gcggtaaagc ggaattggct
     1381 caatcggcct cgatctatgt gtacatgcct tagtctcaat cggtgtccag cagcgatccc
     1441 atcctgattg tcggcggcgg gctcggcggc ctcaccacgg cgctggcgct ggcgtggcgc
     1501 ggccgcgccg cgcgcgtgct cgaaggcgcg ccggaattcg gcgccatcgg ctacggcatc
     1561 cagttcgggc ccaacgtctt tcacgtcttc gaccgcctcg gcctgcgcga ggaggtgctt
     1621 gccgttgcgg attcgccggc cgcgctgctg atgctcgacg cactcgacgg caaggagctc
     1681 atacgcattc cgaccgcggc gttgttccgc gcgcgcttca agcatcccta catcgtcgtt
     1741 catcgcatcg acttgcataa cgtcctgctc gacgcctgcc gacagcacga tgcgatcgag
     1801 ctggtcgccg acgccatggt cacgggcttc gaggatcgcg gcgagtgcgt cgcgctggcg
     1861 accgcggacg gccgcacgtt ttccggcgcc gcgatcgtcg ccgccgatgg tctgcgctcg
     1921 ctgtttcgcg ccaagctcgt cggcgacggc gaaccgcatc cggtcggcta tgccgcgcac
     1981 cgcagcatcg tgccgatggc cgagctcaag gccgacgtgc cgcgcgactg cgtcgtgctg
     2041 tggggcgggc cgggctttca catcgtgcac tatccgctgc gccacggcac gctgttcaac
     2101 gtcgtcgcgg tgttccgcac cgcgacacat ggcgagaagg gcgacgccgc ctcgcatctc
     2161 gccgaactgc agcacagcta ccgcgaggcg cagccggcga tgcgcgcgct gctggcgatg
     2221 atggaggttg ggcgccgctg gcagatcggc tatcgcgatc cggtgcgccg ctggcaccgg
     2281 ggccgcgtcg tcctcatcgg cgacgccgcg cacgcgccgc tgcaatcgct ggcgcagggc
     2341 gcctgcatgg cgatcgagga cggcttctgc ctcgccgaat tgatccacgc gagcgacggc
     2401 gatttcgccg ccgcgttccg ccgtttcgag gcggcccggc tgctgcgcac ggcgcgcgtg
     2461 cagctcgaat cccgcgcgat gtggccgttc taccacgccg aaggcatcgc ccgcgatgtt
     2521 cgcaatgcga ccgtggccga ttgggacgag cgctatctct tcaactgcct ggcgtggctc
     2581 tacgacgggg cggcgctgcc ggccgccgcc ggcggctgac ggcctcgacg tttgcacgat
     2641 tgtcgattct attggggagg gcgcgaatca gctccggccg ccgcggcagc cgggtgaggc
     2701 atctatgaac gatggctaag catgtcgccg ttctgatggg aggctggtct gcggagcgcg
     2761 aggtctcgct gcgttcgggc aaagcctgcg ccgatgcgct cgcccgcgtc gggtatcgcg
     2821 tcaccgccgt cgatgccggc cgtgatgtcg cgacggtgct gagcgggctc aagcccgatg
     2881 tcgcgctcaa tgtcctgcac ggccggcccg gcgaagacgg cacgctgcag ggcgttttgg
     2941 agattctcgg catcccctac agccattccg gcgtgctggc ttcggcgctc gccatgcaga
     3001 aggattatgc caaagcccac ttccgcgccg ccggcatccc ggtcgccgag gacatggtgg
     3061 tgtcgcgaat cgaggcggca aaaacccacc tgatggcgcc gccttacgtc atcaagccga
     3121 tcgccgaagg ctcgagcgtc ggcgttttca tcgtcaccga gcagcatccg cacccgccgc
     3181 ag
//
LOCUS       DATMQB010000263         4056 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_713996, whole genome shotgun sequence.
ACCESSION   DATMQB010000263 DATMQB010000000
VERSION     DATMQB010000263.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4056)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4056)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4056
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_713996"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..355)
                     /locus_tag="VNY79_07860"
     CDS             complement(<1..355)
                     /locus_tag="VNY79_07860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMP-30/gluconolactonase/LRE family protein"
                     /protein_id="HWX72398.1"
                     /translation="MDRRPFAPPLGQTGAPLTPTTPLPLGPLPGSRYPDAHLESLRKP
                     KGALGPAGFPAFAGTNAVERIATGFRWAEGPVYFPAGRYLLFSDIPNNRIMRLSDDDN
                     HLSVFRAPSMNSNGNT"
     gene            complement(406..1293)
                     /locus_tag="VNY79_07865"
     CDS             complement(406..1293)
                     /locus_tag="VNY79_07865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX72399.1"
                     /translation="MLIAGTAYTWERFGSAPLISPTYLLQQLQIGAFLGIVAAGMMLV
                     ILISQIDLSTPWTLTAAAMMATTVGGPEAIPVGLSVGLAVGIVNGLGVAYLRVPSMIF
                     TLGVNAVMRGLMVAHTGGFAPQTTATGLMRMLAAERSFGIPNALFVWVAVSAAVVIIL
                     QRMALGRYIYAIGNKEAAAYLSGVNTRGVTVVCFALCGLTAGIAGVLLAGYSQKAYQG
                     MGDAYLLPSIAAVVIGGTNILGGRGRYLGTLVGVILIVLLNSVLSIMEMPEAGRQVIY
                     GGVIILMLLVYGRGERVTS"
     gene            complement(1368..2480)
                     /locus_tag="VNY79_07870"
     CDS             complement(1368..2480)
                     /locus_tag="VNY79_07870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX72400.1"
                     /translation="MPSDLVIRLRQNFPFVTALVLFCAIFALYQVEHPRGFSSAVLVQ
                     NGDEVFALAMVAMAQTVPVLAAGLDLSVGALMTMVGCCASYLLSGAPEGTPLAVELAG
                     LHLNLGTLPGGIIGIVLGMIICLAVGTLAGLFNGVIVVYGRIQPIIATLATGAIYIGI
                     ALFLRPQPGGKIDDDLNWALTNALSDFASTVHIFDDGAAPWFAPFAWIPTSFVLLALI
                     ALLVWVPFRRSITGRTVYAIGSAEGAAYMSGLNINRAKIAAFTLGGFFAACGGLFLAI
                     QTSSGNADLPQAGTYTLNSIAAVVIGGTSLLGGTGGAIGSIFGALILRVISFFFRIYD
                     IAPLLQPLFEGIILLAAVSIGALRVLRVKNTLELFR"
     gene            complement(2473..4035)
                     /locus_tag="VNY79_07875"
     CDS             complement(2473..4035)
                     /locus_tag="VNY79_07875"
                     /EC_number="7.5.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter ATP-binding protein"
                     /protein_id="HWX72401.1"
                     /translation="MTAATAADFLVLSGISKRYGGVRALENVDFSCRRGTIHAVVGEN
                     GAGKSTLIKIIAGVVAPDAGELRFDGALRHFTNPAAAAAAGIVCIFQELSLMPDLSVA
                     DNVSITSPPRRFGMIDTRAQRRRAEALLAEVGCEDVNPLLRVRDLPLSRRQMVEIAKA
                     LGQKPRLLILDEATSALTRADVEKVYALLARLKTENVAILYITHRMHEVEALADRASV
                     FRNGRHIETFDKGARSTGEIVQLMIGRDIAAQYPPKPIRPRPAPALKIENLGWEPRLE
                     GISLEVGASEIVGLGGLDGQGQKSLLLSLFGVLRGVTGRVTVNGRAVRPRSPGQAKTR
                     AIGIALVPEDRKTEGLMLPMSIADNLAIASLPTLSSGPFVDRGKEQRAVDAALARLQI
                     RIGAKSDAVSTLSGGNQQKVVIAKWLMTEPRIILLNDPTRGIDVGTKQELYRLMRELA
                     DHGAAILFYSTDYDELIGCCDRVAIMYDGRIVRELAGAELNETNIIASALNIEAGANA
                     HGGAEATGAAHA"
BASE COUNT          749 a         1267 c         1419 g          621 t
ORIGIN      
        1 tcgtgttgcc gtttgaattc atcgacggcg cgcggaatac gctcaggtgg ttgtcgtcgt
       61 ccgacagacg catgatgcgg ttattcggaa tgtcgctgaa caggagataa cgtccggccg
      121 ggaaatagac gggaccttcc gcccagcgaa atccggtggc gatccgctcg acggcgttgg
      181 tgccggcgaa cgccggaaag ccggcggggc cgagcgcgcc cttgggcttt ctcagagatt
      241 caaggtgcgc atccggatag cgcgagcccg gcagcggccc gagcggcagc ggggtggtgg
      301 gcgtgagcgg tgcgcccgtt tggccgagcg ggggtgcgaa cgggcgacgg tccatttttt
      361 ccttcccgtg aagttagtga aatgtctgcg ccgtcgggtc tcggctcagc tcgtcacccg
      421 ctcgccgcgc ccgtacacca gcagcatcag gatgatgact ccgccataga tcacctggcg
      481 gccagcctcc ggcatttcca tgatcgagag cacgctgttc aagagcacga tcaggatcac
      541 gccgaccagc gtgccgagat aacggccgcg gccgccgagg atattggtgc cgccgattac
      601 caccgcggcg atcgagggca ggagataggc gtcgcccatg ccctggtagg ccttctgcga
      661 gtagccggcg agcagcacgc cggcgatgcc ggcggtaagc ccgcagagcg cgaagcagac
      721 caccgtcacg ccccgcgtgt tgacgccgga gagataggcc gcggcctcct tgttgccgat
      781 ggcgtagatg tagcggccga gcgccatgcg ctggagaatg atcaccaccg ccgccgaaac
      841 ggcaacccat acgaacaggg cattgggaat gccgaagctg cgctcggcgg caagcatgcg
      901 catcaggccg gtcgctgtgg tctgcggggc aaaaccgccg gtatgcgcga ccatgagccc
      961 gcgcatcacc gcattgacgc caagcgtgaa gatcatcgag ggcacgcgca gataggcgac
     1021 gccgaggccg ttgacgatgc cgacggcgag gccgacggaa agcccgaccg ggatcgcctc
     1081 cggcccgccg accgtggtcg ccatcatcgc ggcggcggtc agcgtccacg gcgtcgaaag
     1141 gtcgatctgg gagatcagga tgaccagcat catcccggcg gcgacaatgc cgaggaaggc
     1201 gccgatctgc agttgctgca gcagataggt cggggagatg agcggcgcgc tgccgaagcg
     1261 ctcccaggta taggcggtgc cggcgatcag gatcgcgacg atgaacagcg ccgcgatcag
     1321 gatcggccgg tcgtcgcggg ggagggtcag gcgcgccggg atcgtactca cctgaacagc
     1381 tccagcgtat tcttgacgcg cagcacgcgc agcgcgccga tgctcaccgc ggccagaaga
     1441 atgatcccct cgaacagcgg ctgcaacaac ggcgcgatgt cgtagatgcg gaagaagaag
     1501 gagatcaccc gcaggatcag cgcgccgaag atcgatccga tcgcgccgcc ggtcccccca
     1561 agcagcgagg tcccgccgat gaccaccgcg gcgatcgaat tgagcgtata ggtgcccgcc
     1621 tgcggcaggt cggcgttgcc ggacgaggtc tggatcgcca ggaacaatcc gccgcaggcg
     1681 gcaaagaagc cgccgagggt gaaggccgcg atcttggcgc gattgatgtt gaggccggac
     1741 atgtaggcgg cgccttccgc cgaaccgatg gcatagacgg tgcggccggt gatcgagcgg
     1801 cggaacggaa cccagaccag aagggcgatc aaggcaagga gaacgaacga cgtcggtatc
     1861 caggcgaacg gcgcgaacca cggcgctgcg ccatcgtcga agatgtgcac ggtcgaggca
     1921 aaatcgctca gcgcgttggt cagcgcccag ttgagatcgt cgtcgatctt gccgcccggc
     1981 tgcgggcgca ggaacagcgc gatgccgatg tagatcgctc cggtcgccag ggtggcgatg
     2041 atcggctgga tgcggccgta gacgacgatc acgccgttga acagcccggc gagcgtgccg
     2101 accgcgagac agatgatcat gccaaggacg atgccgatga tgccgccagg cagcgttccg
     2161 agattgagat gcagtccggc aagttcgact gcgagcggcg tcccctcggg ggcgccactg
     2221 agcagatagc tcgcgcaaca gccgaccatg gtcatcagcg cgccgaccga aagatcaagt
     2281 ccggccgcca gcaccggcac ggtctgcgcc attgccacca tggcaagagc gaagacctca
     2341 tcgccgttct gcacgaggac ggcggaggag aaaccgcgcg gatgttcgac ctgataaagg
     2401 gcgaagatag cgcagaacag caccagcgcg gtcacgaagg ggaaattctg ccgcagcctg
     2461 atgacgagat cgctaggcat gagcggcccc ggttgcctcg gcgccgccgt gcgcgttggc
     2521 gccggcctcg atgttgagcg cgctggcgat gatgttggtc tcgttgagct cggcgccggc
     2581 gagctcgcgc acgatgcggc cgtcatacat gatggcgacg cggtcgcagc aaccgatcag
     2641 ttcgtcgtag tcggtggaat agaacaggat cgccgcgccg tggtcggcga gttcgcgcat
     2701 cagccgatag agctcctgct tggtgccgac gtcgatgccg cgggtcggat cgttgagcag
     2761 aatgatgcgc ggttcggtca tcagccattt ggcgatgacg accttctgct ggttgccgcc
     2821 ggaaagcgtc gacaccgcgt cgctcttggc gccgatcctg atctgcaggc gcgcgagcgc
     2881 cgcatcgacc gcgcgctgct ccttgccgcg gtcgacaaaa ggtcccgaag agagggttgg
     2941 caacgaggcg atggcaagat tgtcggcgat cgacatcggc agcatcaggc cttcggtctt
     3001 gcggtcctcg ggcacgaggg cgatgccgat ggcgcgggtc ttggcctgcc ccggcgagcg
     3061 cggccgtacc gctcggccgt tgaccgtgac gcggccggtt acgccgcgca gcacgccgaa
     3121 cagtgacagc agcaggctct tctggccctg gccgtcgagg ccgccgaggc cgacgatttc
     3181 gctggcgccg acttcgagcg agatgccttc gaggcggggc tcccagccga ggttctcgat
     3241 tttcagcgcc ggcgccgggc gcggccgtat cggctttggc ggatactgag ccgcgatgtc
     3301 gcggccgatc atcagctgca cgatttcgcc ggtcgagcgc gcgcccttgt cgaaggtctc
     3361 gatgtggcgg ccgttgcgga acaccgacgc gcggtcggcc aaggcctcga cctcgtgcat
     3421 gcggtgcgtg atgtagagga tcgcgacgtt ctccgtcttc agacgcgcca gcagggcgta
     3481 gaccttctcc acgtcggcgc gcgtcagagc ggaggtcgcc tcgtcgagga tcagaagccg
     3541 cggcttttgt ccaagggcct tggcgatttc caccatctgc cggcgcgaca gcggcaggtc
     3601 gcgcacccgc agcagcggat tgacgtcctc gcaaccgacc tcggccaaca acgcttcggc
     3661 gcgccggcgc tgtgcgcgcg tgtcgatcat gccgaagcgc cgtggcggcg aggtaatcga
     3721 gacattgtcg gcgaccgaaa ggtcgggcat cagcgacaat tcctggaaga tgcaaacgat
     3781 gccggccgcg gcggcggcgg ccgggttggt gaagtgccgc aaggcgccgt cgaagcgcag
     3841 ttcgccggca tccggcgcaa cgacgccggc gatgatcttg atcaacgtgg acttgccggc
     3901 gccgttctcg ccgacaacgg cgtggatggt gccgcgccgg caactgaagt cgacgttctc
     3961 caacgcgcga acgccgccgt agcgcttgga aatcccggaa aggacgagaa aatcggctgc
     4021 cgtcgctgcg gtcatcaccg gatccggtca cccttg
//
LOCUS       DATMQB010000264         2629 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3505888, whole genome shotgun sequence.
ACCESSION   DATMQB010000264 DATMQB010000000
VERSION     DATMQB010000264.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2629)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2629)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2629
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3505888"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1275)
                     /locus_tag="VNY79_07880"
     CDS             complement(<1..1275)
                     /locus_tag="VNY79_07880"
                     /inference="COORDINATES: protein motif:HMM:NF024882.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK 4TM domain-containing
                     protein"
                     /protein_id="HWX72402.1"
                     /translation="MAPTLGCFVADAPRNDEIEARPMSMIDRSLDGMVFLTGQLGAVL
                     KRRLREAGGIALISLAMMAALALATWSVHDPSLSHATDARVHNLLGRPGAVAADLMMQ
                     LLGLGAVGLLLPIGVWGYRLLGHRPLSRERLRVLFWLLGVVLAAAFASCLPRSTHWPL
                     PSGLGGVVGDAVLRVPPAFFGVPLTGTRQLGAAIVLGVAALMAFAAAAGIIWRDSADE
                     DEDEPAEDEDESAWVSLGLLAHYLLSFQARLARMFRRSAPPRFPVSDAETPRRRLEPR
                     MRDDLEHDAEDGESDEDESIAPAPRAPRKPRAAAKPARRSWGGYEHPSLGLLAAPRAS
                     ERTTLSADLIRENGAALEGVLSDFGVRGEIIDARPGPVVTLYELEPAPGIKSSRVISL
                     ADDIARSMSALSARVAVVSGRNVIGIELPNPTR"
     gene            complement(1346..2557)
                     /locus_tag="VNY79_07885"
     CDS             complement(1346..2557)
                     /locus_tag="VNY79_07885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HWX72403.1"
                     /translation="MLRMTGQFSRSPARAPDARSPFVRLRELIGDAPAGKPAISMAVG
                     EPQHPMPAFVGPVIAAHLDGFGRYPMNKGLDAFAEAVAKWLDRRYALARPVDPATEVL
                     VLNGTREGLFLAALAARSWVAPRTGTPAVLIPNPFYAAYAAGAVAAGCEPVYLPATAA
                     TGFLPDLDALGEDLLARTVAVYLASPANPQGAVADRAYLARLVVLARRFGFLIFADEC
                     YCEIYSDRPPPGMLEAATPDFANVVVFHSLSKRSSLPGLRVGFAAGDRRFLAAYLELR
                     NVAAPQVPLPAQHVAIAAYRDETHVNENRRLYRQKFDLADQIVGDRYRYVRPAGGFFL
                     WLDVSAQGGSEAATLALWREGGVRVVPGRYLAREQADGSNPGADYVRVAMVQKEDITA
                     EALHRLVAVLG"
BASE COUNT          419 a          895 c          966 g          349 t
ORIGIN      
        1 gcgggtcggg ttcggcaatt cgatgccgat gacgttgcgg ccggaaacga cggcgacgcg
       61 cgcggagagc gcgctcatcg agcgggcgat gtcgtcggcg agactgatga cgcgcgagga
      121 tttgatgccg ggcgcgggct cgagctcgta gagcgtgacc accggccccg gccgcgcatc
      181 gatgatctcc ccacgcacgc cgaagtcgga gagcacgcct tcgagcgccg ccccgttctc
      241 gcggatgagg tcggcgctga gcgtggtgcg ctcgctggcg cgcggtgccg ccagcaggcc
      301 gagcgaaggg tgctcatagc cgccccacga acggcgtgcc ggctttgccg ccgcacgcgg
      361 tttgcgcggg gcccgcgggg cgggggcgat cgattcatcc tcgtcggatt ccccgtcctc
      421 ggcgtcgtgc tccaggtcat cgcgcatgcg cggctcgagg cggcggcgcg gcgtttccgc
      481 atcgctcacg gggaatcgcg gcggcgcgct gcggcggaac atccgcgcca ggcgcgcctg
      541 gaagctgagc aggtaatgcg ccagcaggcc gagcgagacc catgcgctct cgtcctcgtc
      601 ctcggcgggc tcgtcctcgt cttcgtccgc cgagtcgcgc cagatgatgc cggcggcggc
      661 ggcgaaagcc atgagggctg ctacgccgag cacgatcgcc gcgcccaatt gccgggttcc
      721 ggtcagcggc acgccgaaaa aggcgggcgg cacgcgcagc acggcgtcgc cgaccacgcc
      781 gccgagcccg gagggcagcg gccaatgcgt gctgcgcggc aagcacgagg cgaacgccgc
      841 ggccagcact acgcccagga gccagaacag gacgcgcaac cgctcgcggc tcagcggccg
      901 atgcccgagc agccgatagc cccacactcc gatcggcagc aggaggccga ccgcgcccag
      961 ccccagaagc tgcatcatga ggtcggcggc gaccgcgccc gggcggccga ggagattgtg
     1021 cacccgcgcg tcggtcgcgt ggctgagcga aggatcgtgg acggaccagg tggcgagcgc
     1081 gagcgccgcc atcatggcga gactgatcag cgcgatgccc cccgcctcgc gcagccgccg
     1141 cttgagaacc gcgccgagct ggccggtgag gaagaccatt ccatcgaggc tgcggtcgat
     1201 catcgacatc gggcgtgcct ctatctcgtc gttgcgagga gcgtcagcga cgaagcagcc
     1261 cagagtcggt gccaacggcc cctggattgc ttcgccgtcg gctcgcaatc acgaccactt
     1321 cgtgtgcgcg acatcgtcat cttgctcacc cgagcaccgc gacgaggcgg tgcagcgcct
     1381 cggccgtgat gtcctccttc tgcaccatgg cgacgcggac gtagtcggcg ccgggattgc
     1441 tgccgtcggc ctgctcgcgc gcgaggtagc ggcccggcac gacgcgcacg ccgccctcgc
     1501 gccacagcgc gagcgtcgcc gcttcgctgc cgccctgcgc cgacacgtcg agccagagga
     1561 agaagccacc ggcgggacga acgtagcggt agcggtcgcc gacgatctga tcggcgaggt
     1621 cgaatttttg ccggtagagg cggcggttct cgttgacgtg ggtttcgtcg cggtaggcgg
     1681 cgatggcgac gtgctgcgcg gggagcggta cttgcggcgc ggcgacgttg cgcagttcga
     1741 gataggcggc gaggaagcgg cggtcgccgg cggcgaagcc cacgcgcaga ccgggcaggc
     1801 tcgagcgctt cgacagcgag tggaagacga cgacattggc gaaatccggc gtcgccgctt
     1861 cgagcatgcc cggcggcggc cggtcgctgt agatctcgca gtagcattca tcggcgaaaa
     1921 tgaggaaacc gaagcgccgc gccagcacga ccaatctggc gaggtaggcg cgatcggcta
     1981 ccgcgccctg cggattggcg ggcgaggcaa ggtagacggc gaccgtgcgc gcgagcagat
     2041 cctcgcccag tgcgtcgagg tcgggcagga agccggtcgc cgctgtcgcc ggcagataga
     2101 ccggctcgca accggcggcg accgcgccgg ccgcataggc ggcatagaac ggattgggaa
     2161 tgagcacggc cggcgtgccg gtgcgcggcg ccacccagct cctggcggcg agcgcggcaa
     2221 ggaacaggcc ctcgcgggtg ccgttgagca ccagcacttc ggtcgccgga tcgaccgggc
     2281 gcgcgagcgc atagcgccgg tcgagccatt tcgcgaccgc ctcggcaaac gcgtcgagcc
     2341 ccttgttcat cggatagcgg ccgaacccgt cgagatgcgc ggcgatcacc gggccgacga
     2401 aggcgggcat cgggtgctgc ggctcgccga ccgccatgct gatcgcgggc tttcccgccg
     2461 gcgcgtcgcc gatcagttcg cgcagtcgca cgaacggcga gcgcgcgtcg ggcgcgcgcg
     2521 caggcgagcg ggaaaactgt ccggtcatcc tcaacatctt gaacagcggg gcccccgcca
     2581 tcaccgtctc tgcatagcat aggagcggcg aggttaagac ccgattaac
//
LOCUS       DATMQB010000265        14235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1338122, whole genome shotgun sequence.
ACCESSION   DATMQB010000265 DATMQB010000000
VERSION     DATMQB010000265.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 14235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14235
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1338122"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..939
                     /locus_tag="VNY79_07890"
     CDS             <1..939
                     /locus_tag="VNY79_07890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate/arogenate dehydrogenase family
                     protein"
                     /protein_id="HWX72404.1"
                     /translation="LVGVGLIGSSIARAARAQGVVGEIVATARSAATRRRVVELGLAD
                     RVVETNAAAAAGADLVILCVPVGACGAVAEEVGPHLERGATISDVGSVKAAVLRDMAP
                     HLPDGVHFVPAHPVAGTENSGPDAGFAELFVGRWCILTPPDDADPAAVEKLAAFWRAL
                     GAHVETMPAAHHDLVLAITSHLPHLIAYTIVGTADELAEVTRSEVLKFSAGGFRDFTR
                     IAASDPTMWRDVFLANKDAVLEMLGTFSEDLSQLTRAIRRGDGNALFDHFTRTRAIRR
                     GIVEIGQDSAAPDFGRPHPELPVEPLPRPYALSDDS"
     gene            complement(990..1367)
                     /locus_tag="VNY79_07895"
     CDS             complement(990..1367)
                     /locus_tag="VNY79_07895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011084205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HWX72405.1"
                     /translation="MARILIAEDEDALRALCARALASEGREVKSACDGSEALDLLAGE
                     QGRFDLLLTDIRMPLMDGIALELAAARDFPDLTILLMTGYADQRERAHGLDAIIHDVI
                     AKPFTVGVLRATINEALAVRARF"
     gene            complement(1382..2392)
                     /locus_tag="VNY79_07900"
     CDS             complement(1382..2392)
                     /locus_tag="VNY79_07900"
                     /inference="COORDINATES: protein motif:HMM:TIGR02098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-ribbon domain-containing protein"
                     /protein_id="HWX72406.1"
                     /translation="MLIVCPSCATSYDVELASLGPLGRQVRCSRCRTVWRAAPAHADK
                     LLAAAEAIAPAPVAEPVLEDVGAAPPHEPAVEAPTEEVSEIRRRIAAMDEPEGEDEEA
                     AEGEAVDAPAAEHEDAPTAEGAALPDEPIEAAEVESPPIVPVDLDEGRPPIDIDAADF
                     AERSIGPGADVESVAARRFRLDLGSRPRWPLSHLQTFILALVIVDAIVVGWRNDFVRL
                     FPQTAAFYALTGLSVNLRGVDFAGVTTIAEQHEGVPILVVQGNIANTTRKVVDVPRIK
                     FIARNAARQEIYSWTAAPARTVLSPGEVIPFRSRLASPPTDAQDVLVRFVNRRDVLAG
                     TR"
     gene            2573..3232
                     /gene="ftsE"
                     /locus_tag="VNY79_07905"
     CDS             2573..3232
                     /gene="ftsE"
                     /locus_tag="VNY79_07905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HWX72407.1"
                     /translation="MIRFENVGLRYGLGAEVLRDVTFGIEGRSFQFLTGPSGAGKTSL
                     LRMMFLSLRPTRGLISVFDHDAATLSKDGRATLRRRIGIVFQDFRLLDHMTTYENVAL
                     PLRVLGKEEVQYRPEVVELLQWVGLGECMGALPPVLSGGEKQRTAIARAVIARPQLLL
                     ADEPTGNVDPNLGQRLLRLFIELNKSGTAVVIATHDIALMDEYDARRLVLHEGRLHVY
                     D"
     gene            3225..4196
                     /locus_tag="VNY79_07910"
     CDS             3225..4196
                     /locus_tag="VNY79_07910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX72408.1"
                     /translation="MTKPIETMAEPWDDFEGVAPLALAPPAATPIVPNTSIAGRSLAA
                     VVAIMTFLAALTTGAVMLVVSAASDWQSDVGREVTIQVRPAPGRDVEADVRKAAEIAR
                     ATPGVADVRAYTKQESARLVEPWLGGGLSLDDLPIPRLIVVKLASGVLPDFEALRRAL
                     AAQVAGATLDDHRRWIDRMRTMAGTAVAAGVAVLALVLAVTVLSVTFATRGAMATNRP
                     IIEVLHYVGATDGFIAGQFQRHFLLLGFKGGAIGGGAAIFFFGAAEAANAWLAGTAGG
                     DQAAALFGNVSIGVSGYLAILTQVILMAMVTALASRRTVNRTLETMD"
     gene            4306..4965
                     /locus_tag="VNY79_07915"
     CDS             4306..4965
                     /locus_tag="VNY79_07915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006018823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HWX72409.1"
                     /translation="MLSLNSAVTTRRLRSFAVRFSLLCGIAIVLGFVGFVSLVPDEEI
                     VLDRNADGIVVLTGGTSRVTDALELLAAGRGKRLLISGVNPGTTTSDIAHQVSEYSRF
                     LSCCVDLDYSALNTLGNAVETRRWVIDRGFHSLIIVTSAYHMPRALAEIAHQLPDVVL
                     IPFPVVADRLRVEPWWSNSTTTRLVLSEYFKYLFAKVRMRFDSVTAGATNNRVSDARL
                     R"
     gene            5008..5748
                     /locus_tag="VNY79_07920"
     CDS             5008..5748
                     /locus_tag="VNY79_07920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HWX72410.1"
                     /translation="MSHSPALFARSLLFNLLFYVNIIVRMIVALPTIVLPRSFMLGVL
                     RRYARSSLWLLRVVCGVTVEWRGREKIPAGACIVACKHQSFWETFALFEVLRDPTYVL
                     KRELMWLPLFGWLAQKSRMIPIDRNARVAALGRMAAAARRELANSRQLVIFPEGTRRA
                     PGAEPRYMPGVAYLYSEIGLPCVPIALNSGLYWPRRSLLRLPGTVLVEILDPIPPGLD
                     KRAFLARLRSVVEEATARLVAEGRKQQR"
     gene            complement(5772..6413)
                     /locus_tag="VNY79_07925"
     CDS             complement(5772..6413)
                     /locus_tag="VNY79_07925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013504541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003839 - gamma-glutamylcyclotransferase
                     activity [Evidence IEA];
                     GO_function: GO:0061928 - glutathione specific
                     gamma-glutamylcyclotransferase activity [Evidence IEA];
                     GO_process: GO:0006751 - glutathione catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamylcyclotransferase"
                     /protein_id="HWX72411.1"
                     /translation="MKTRGIKPTDTKNTGDLWVFGYGSLMWRPGFEFLERVPARLIGL
                     HRALCVYSFVHRGTPERPGLVLGLDRGGMCRGIAFRVAGSARTETVAYLRAREQVTTV
                     YLETVRRIELEEPARRQVRALCFIVDRSHVQYAGRLTLAECVHHVRQGHGRSGANRDY
                     VVETVQALEALGYRETDLHLVAERLRSDAAHRKAEVGNQKPEIRNRRSGISNL"
     gene            6676..7794
                     /locus_tag="VNY79_07930"
     CDS             6676..7794
                     /locus_tag="VNY79_07930"
                     /inference="COORDINATES: protein motif:HMM:NF021423.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2125 domain-containing protein"
                     /protein_id="HWX72412.1"
                     /translation="MPVAIVVALVPGWVWGWYYSAAVADRTLAGWIEREAAGGRIYSC
                     GSQAVGGFPLRIEVHCADAEAQVNSYHPPFAVKAKDVTFTARVYRPTLLVGDVTGPLS
                     LFESNEAPRLVADWSRAQVSVRGLPPDPDSVSFMLDRPRLDRAGGAGAAADVGEMLFR
                     AEHVEFHGRVVAGSPRNHPVIEAELRLTAATAPTLHPLVAEPIQAEGDAVLRGFTDLS
                     PKSWAARFREMQAAGGSIEIKHLRIARSDAIVVGAGTLNVNPHGKLDGLIRIAVVGVE
                     RIVPLLGIDQLIGRGVDRLAGVDNASTQGLAALDRLMPGLGGTLRNTANASVIENLKK
                     MGEPTEIDHKPAIVLPLRFSDGAIYLGMLPLGDAPALF"
     gene            complement(7875..8384)
                     /gene="tsaA"
                     /locus_tag="VNY79_07935"
     CDS             complement(7875..8384)
                     /gene="tsaA"
                     /locus_tag="VNY79_07935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase
                     TrmO"
                     /protein_id="HWX72413.1"
                     /translation="MSEIDQGAYGLREGEVAVELPERFDASLYYIGRIRTPWKRREDC
                     PKNPRESDAECTIALDPRWTAGLSGLETVSHVVVLYWMNRARRDLVLQAPHHYAERRG
                     TFALRSPVRPNPIAVSVARLVRIDGNNLSVVGLDCVDDTPLLDLKPYFASTDSIPDAA
                     VGWHAGRDR"
     gene            8545..9543
                     /locus_tag="VNY79_07940"
     CDS             8545..9543
                     /locus_tag="VNY79_07940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloregulator ArsR/SmtB family transcription
                     factor"
                     /protein_id="HWX72414.1"
                     /translation="MDSAQLSFPALTATLKAAGEATRLRLLVLIGEAELTVSDLTAIV
                     RQSQPRLSRHLRLLAEAGLVERYREGSWVFFRLGERGSAADIARALIARLDPNDPAVA
                     RDRERLAAVRAARAAAAQNYFRRHAAEWDRIRQLHVADAAVEAAIRAALGDKPMRTLL
                     DLGTGTGRMLELFAGDIERGLGLDLSRDMLALARARLDRAGFKHCSVRHGDIYDLAVP
                     RDSFDVVIIHQVLHFLDDSARAIREAARVLRPGGRLLIVDFAPHDLEFLRDEHAHRRL
                     GFAAETMTQWLEAAGLDIVREQTLPPEPQGKIAVSLWLARDPRVALAEPATTLEVA"
     gene            9543..10484
                     /gene="metF"
                     /locus_tag="VNY79_07945"
     CDS             9543..10484
                     /gene="metF"
                     /locus_tag="VNY79_07945"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase [NAD(P)H]"
                     /protein_id="HWX72415.1"
                     /translation="MNAPRASRFARGDAPRGVRVSFEFFPPKTAEMEQALWEAIGRLA
                     PLNPNFVSVTYGASGSTRERTHATVKRILAETMLTPAAHLTCVAATRADVDAVIGAYA
                     QAGVRHIVALRGDPTGGVGERYAPHPGGYGNAAELVAGIKRIAPVEVSVSAYPEKHPD
                     SPTVAADIDMLKAKVDAGATRAITQFFFENALYFRYLDRVRASGIDIPVVPGILPVQN
                     FKQTKNFAARCGASVPAWLAERFDGLDDDPATRKLIAAAVAAEQVLDLVDHGVTDFHF
                     YTMNRADLVFAICHLLGVRPSIAPGASRPLPAGERVG"
     gene            10495..14217
                     /gene="metH"
                     /locus_tag="VNY79_07950"
     CDS             10495..14217
                     /gene="metH"
                     /locus_tag="VNY79_07950"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008705 - methionine synthase activity
                     [Evidence IEA];
                     GO_function: GO:0031419 - cobalamin binding [Evidence
                     IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HWX72416.1"
                     /translation="MTTAAETTLRRLAAERILVLDGAMGTMIQALGLNEQGYRGARFD
                     AWNREVRGNNDLLNLSRPDAVRGIHLAYFRAGADIVSTNTFSSTRIAQSDYGMAEIAY
                     ELNLEGARLARQAAQVAENEDGRARFVAGAIGPTNRTASISPDVSNPGFRAITFDELR
                     AAYAEQVRGLINGGVDVLLIETIFDTLNAKAAICAIAEVSEERRLRLPVMISGTITDR
                     SGRLLSGQTPEAFWNSVTHAPPLSIGLNCALGAKQLRAHIAELARVADTFICAYPNAG
                     LPNEFGHYDESPAAMAALIGEFAAAGLVNIVGGCCGTTPDHIRAITAAVAGKKPRAVP
                     AVAPLLRLSGLEAFTLTPEIPFVNVGERTNVTGSARFRKLITAGDYAAALAVARDQVE
                     NGAQILDVNMDEGLLDSEKAMTTFLNLIAAEPDIARVPLMIDSSKFSVIEAGLKCVQG
                     KAVVNSISLKEGEESFIRHAETVRRYGAAVVVMAFDEKGQADTLERKTAITARAYDIL
                     VNRVGFPPQDIIFDPNIFAIATGMEEHNGYGVAFIEGARWIRQNLPHAHVSGGVSNLS
                     FSFRGNELVREAMHSVFLYHAIAAGMDLGIINAGQIAVYDDVDRELREACEDVVLNRR
                     TDAAERLLALAQRHRGHGREKKEADLSWREWPVEKRLSHALVHGITDFIEADVEEARR
                     NAPRPLAVIEGPLMDGMNTVGDLFGSGRMFLPQVVKSARVMKQAVAYLLPFMEQDKDG
                     RAHTSSNGKIVLATVKGDVHDIGKNIVGVVLQCNNYDVVDLGVMVPAEKILQAAIAEQ
                     ADIIGLSGLITPSLDEMCHVAAEMERQGFEVPLLIGGATTSRVHTAVKIHPNYRRGQT
                     IYVNDASRAVGVVSSLLGRETRQRVVTEIRAEYARIAAAHARGEATKQRLSLADARVN
                     GLKLNWSGNYVPPAPHLIGTHRLPDIPISELVGYIDWTPFFATWELNGKFPAIFDDAK
                     IGEAARSLYADAQEMLGRIAAEGWFRAAAVIGIWPANGEGDDILLFDNEARSEPIATL
                     HTLRQQLARREGRSNVALADFVAPRASALADYIGAFAVTTGLGEDAVVERFKRANDDY
                     SAIMVKALADRFAEALAEHLHQRVRREFWGYAADEALAPADLVAEKYRGIRPAPGYPA
                     QPDHSEKATLFALLDSERAIGVRLTESFAIWPGASVCGLYFSHPESHYFGVGRIERDQ
                     VEDYANRKRWTLEQAEKWLAPILNYDPLAAVRSAAE"
BASE COUNT         2216 a         4986 c         4653 g         2380 t
ORIGIN      
        1 ttggtcggcg tcggcctcat cggctcctcg atcgcgcggg cggcgcgcgc gcagggcgtg
       61 gtgggcgaga tcgtcgccac tgcgcgctca gcggcgacgc ggcgacgcgt cgtcgagctt
      121 ggcctcgcgg accgggtcgt cgagaccaac gccgcagcgg ccgccggcgc cgacctcgtc
      181 atcctttgcg ttcccgtcgg cgcctgcggc gccgttgccg aggaggtcgg gccgcatctt
      241 gagcgcggcg ccacgatctc cgatgtcggc tcagtcaagg ccgcggtgct gcgcgacatg
      301 gctccgcatc tcccggacgg cgtgcatttc gtccccgccc atccggtcgc cggcaccgag
      361 aattccggcc ccgacgccgg cttcgccgaa ctgtttgtag ggcgctggtg catcctcacg
      421 ccgcccgacg acgccgaccc cgccgcagtc gaaaagctcg ccgcgttctg gcgcgcactt
      481 ggcgcccatg tcgagaccat gccggcggcg catcacgacc tcgttctggc gataacaagc
      541 cacctgccgc acctcatcgc ctacacgatc gtcggcaccg ccgacgagct ggccgaagtc
      601 acgcgctccg aggtgctcaa attctccgcc ggcggctttc gcgacttcac ccgcattgct
      661 gcctcggatc cgaccatgtg gcgcgacgtg ttcctcgcca acaaggacgc ggtcctggaa
      721 atgcttggca ccttcagcga agacctttcg cagctgaccc gcgcgatccg ccgcggcgac
      781 ggcaacgccc tgttcgacca cttcacccgc acccgcgcga tccgccgcgg catcgtcgag
      841 atcggacagg attcggcggc gcctgatttc ggccgcccgc atcctgagct gccggtcgag
      901 ccgttgcctc ggccttatgc gttgtcggat gacagctgaa cgcgggcgca gcgcggtcct
      961 ttcgcggcca gcaatcgact acgcgcgctt taaaaacgcg cccgcaccgc cagcgcctcg
     1021 ttgatggtgg cgcgcagcac cccgaccgta aacggcttcg cgatcacgtc atggatgatg
     1081 gcgtcgaggc cgtgggcgcg ctcgcgctgg tctgcatagc cggtcatcag caggatcgtc
     1141 agatcaggaa agtcgcgcgc cgcggcgagc tcgagcgcaa tgccgtccat gagcggcatg
     1201 cggatgtcgg tgagcaggag gtcgaagcga ccttgctcgc ccgccagcag atcgagcgcc
     1261 tcgctgccat cgcaagcgga tttgacctcg cggccttcgc tcgcgagagc gcgcgcacaa
     1321 agcgcgcgca gggcgtcttc gtcttcggct atgagaatgc gcgccatgga cggacccgat
     1381 ctcagcgcgt tccggcgagc acgtcgcggc gattgacgaa gcgcaccagc acgtcctggg
     1441 cgtcggtcgg cggcgaggcg agccggctgc ggaatgggat gacctcaccc ggcgaaagca
     1501 cggtgcgcgc cggcgcggcg gtccaggaat agatttcctg ccgggcggcg ttgcgggcga
     1561 tgaatttgat ccgcggcacg tcgacgacct tgcgggtcgt gttggcgatg ttgccctgga
     1621 ccaccaggat cggcacgccc tcgtgctgct ccgcaatcgt cgtgacgccc gcgaaatcga
     1681 cgccgcgcag gttcaccgac agcccggtca gggcgtagaa cgcggcagtc tgcgggaaaa
     1741 ggcggacgaa gtcgttgcgc cagccgacga cgatcgcgtc gacgatcacc agcgccagga
     1801 tgaaagtttg cagatgcgac agcggccagc gcggccggct tccgagatcc agccggaagc
     1861 ggcgggcggc gacgctctcg acatccgcgc ccggcccgat gctgcgctcc gcgaaatcgg
     1921 cggcatcgat gtcgatcggc ggccggccct catcgaggtc gaccggcacg atgggcggcg
     1981 attctacctc ggcggcttca atcggctcat cgggcaaagc ggcgccttcg gctgtcggcg
     2041 cgtcctcatg ctcggcggcc ggcgcgtcga ccgcttcgcc ctctgccgcc tcctcatcct
     2101 cgccttccgg ctcgtccatg gcggcaatgc gccgccggat ttcgctcact tcttcggtgg
     2161 gcgcttccac ggcgggctcg tgcggcggcg ctgcgccgac atcctccagt acgggttcgg
     2221 cgaccggcgc cggcgcgatc gcctccgccg cggcgagaag cttgtcggcg tgggccggcg
     2281 ccgcgcgcca aaccgtgcgg cagcgcgagc agcgcacctg gcgtccgagt ggccccaggc
     2341 ttgccagctc cacgtcatag gaggtagcgc aggacgggca gacgatcagc atcggcgaat
     2401 cagcagcgcg gcaccttccc cgcgaccgta gcaggcgatc cgttaacgga ttggaaacca
     2461 agccacgcgg cagagagatt gcggcgccgt ggtgttaggc ttgcgggggg ctcgaatcag
     2521 tcacggcccc tgccgccggt tgccctcgcg gcaggagcct tcggaggacg gcgtgatccg
     2581 gttcgagaat gtgggcttgc gctacgggct cggagcggag gtcctgcgcg acgtcacctt
     2641 cggcatcgaa gggcgttcgt ttcagttcct caccggcccc tccggcgccg ggaagacctc
     2701 gctgttgcgc atgatgtttc tgtcgctgcg gccgacgcgc ggcctgatca gcgtgttcga
     2761 tcatgacgcg gcgacgctta gcaaggacgg gcgggcgacc ttgcggcgca ggatcggcat
     2821 cgtcttccag gacttccggc tgctcgacca catgaccacc tacgagaacg tggcgctgcc
     2881 gctgcgcgtc ctcggcaagg aggaggtcca gtaccggccg gaggtcgtcg aattgctgca
     2941 atgggtcggc ctcggcgagt gcatgggcgc gttaccgccg gttctttccg gcggcgagaa
     3001 gcagcgcacc gcgatcgcgc gcgcggtcat cgcccgccca caactcctgc tcgccgacga
     3061 gccgaccggc aacgtcgatc ccaatctcgg ccagcgcctg ctgcggctgt tcattgagct
     3121 caacaagtcg ggcacggcgg tggtgatcgc cacccacgac atcgccttga tggacgaata
     3181 cgacgcgcgc cggctggtgc tgcacgaagg ccgcctgcat gtctatgact aagcccatcg
     3241 agaccatggc ggagccgtgg gacgatttcg aaggggtggc gccgctcgcg ctggcgccgc
     3301 ccgctgcgac gccgatcgtc cccaacacct cgatcgccgg ccgttcgctc gccgccgtcg
     3361 tcgccatcat gaccttcctc gccgcgctga cgaccggcgc cgtgatgctg gtggtcagcg
     3421 cggcgagcga ctggcaatcg gatgtcggcc gcgaggtcac catccaggtg cgtcctgctc
     3481 cggggcgcga tgttgaagcc gacgtgcgca aggcggccga gatcgcgcgc gcgacgccgg
     3541 gcgttgccga cgtgcgcgcc tatacgaagc aggaatcggc gcgattggtc gagccctggc
     3601 tcggcggcgg gctctcgctc gacgaccttc cgatcccgcg cctgatcgtg gtcaagctcg
     3661 cctccggcgt gctgcccgac ttcgaggccc tgcgccgggc cctggcggcg caggtcgccg
     3721 gcgccaccct cgacgatcat cgccgctgga tcgaccgcat gcgcaccatg gcgggaacgg
     3781 cagtggcggc cggcgtcgcc gtgcttgccc tcgtcctcgc cgtcaccgtg ctctcggtca
     3841 ccttcgcgac gcgcggcgcc atggcgacca accgcccgat catcgaggtg ctgcactatg
     3901 tgggcgcgac cgatggtttc atcgccgggc agttccagcg ccatttcctg ctgctcggct
     3961 tcaagggcgg cgccatcggc ggcggggcgg cgatcttctt cttcggcgct gcggaagcgg
     4021 ctaacgcctg gcttgccggg actgcgggcg gcgaccaggc cgccgccttg ttcggcaacg
     4081 tctccatcgg tgtttccggc tacctcgcga tcctcaccca ggtcatactg atggccatgg
     4141 tgacggcgct cgcgtcgcgg cggacggtta accgtaccct ggagactatg gactgaggct
     4201 gcaaatcagc accaacttgc cgccggaatc acggctatga tcgcgcacca tcggtgccga
     4261 aaggagccgg cgcaaggaat cttggcgcgg gggacgcgcg cgacgatgct cagccttaac
     4321 tccgctgtca ccacgcggcg cctcaggtcg tttgccgtca ggttctcctt gctctgcggc
     4381 atcgccatcg ttcttggctt cgtcggcttc gtctccttgg tgcccgacga agagatcgtg
     4441 ctcgaccgca atgccgacgg catcgtcgtg ctcaccggcg gcacctcgcg cgtcaccgat
     4501 gcgctcgaac tgctcgccgc cggtcgaggc aagcggctgc tcattagcgg cgtcaatccc
     4561 gggaccacca cgagcgacat cgcccatcag gtttccgaat acagccgctt cctgtcgtgc
     4621 tgcgtcgatc tcgactattc ggccctcaac acgctcggca atgcggtcga aacgcgccgc
     4681 tgggtcatcg accgcggctt tcactcgctc atcatcgtca cgtcggccta ccacatgccg
     4741 cgcgcgctcg ccgagatcgc ccaccagctc cccgacgtcg tgctgatccc gttcccggtg
     4801 gtcgcggacc gcctgcgcgt cgagccgtgg tggtcgaaca gcacgaccac ccggctggta
     4861 ctgtcggaat atttcaaata cctttttgcc aaggtgcgca tgcggttcga ctccgtgacc
     4921 gccggggcca ccaacaatcg cgtctccgac gcccgtctgc gctgaggcgc cggcgccagc
     4981 aacggattcc actcgatcga gcgcccattg tcgcattccc ctgccctgtt cgcccgttcg
     5041 ttgctgttta atctgctgtt ctatgtgaac atcatcgtgc gcatgatcgt ggctttgccg
     5101 acgatcgtgc tgccccgaag cttcatgctt ggcgtgttgc gccgctatgc gcggagcagc
     5161 ctttggctgc tgcgggtcgt ttgcggtgtc accgtcgaat ggcgcggccg cgagaagatc
     5221 cccgcggggg cgtgcatcgt cgcctgcaaa caccagtcgt tctgggaaac tttcgcgttg
     5281 ttcgaagtgc tgcgcgatcc gacctacgtg ctcaagcgcg agctgatgtg gctcccgctt
     5341 ttcggctggc tcgcgcaaaa gtcgcgtatg attccgatcg accgcaacgc gcgcgtggcg
     5401 gcgctggggc gaatggcggc ggcggcgcgc cgggagctcg cgaactcacg tcagctcgtg
     5461 atctttcccg aaggcacgcg ccgcgcgccg ggcgctgagc cgcgctacat gcctggcgta
     5521 gcgtatctct acagcgagat cgggcttcct tgcgtgccga tcgcgctcaa ttccgggcta
     5581 tactggccgc gccgatcgct gctccgcttg cccggcaccg tgctggtcga gatcctcgac
     5641 ccgatccctc ccggcctcga caagcgggca ttcctggcgc ggctgcggag cgtcgtcgag
     5701 gaggcaaccg cccggctcgt cgccgaaggc aggaagcagc aacgctgacg tcggaaatca
     5761 gaaatcggaa atcagagatt gctgattccg gatctcctgt tcctgatttc cggcttctga
     5821 tttcccactt cggctttccg atgcgcggca tccgatctga gccgctcggc gacgagatgc
     5881 aggtcggtct cgcgatagcc gagcgcttcc aacgcctgca ccgtttcgac cacgtagtcg
     5941 cggttggcgc ccgaccgacc gtgaccttgc cgcacatgat gcacgcactc ggcgagcgtc
     6001 agccgcccgg catattggac gtggctgcgg tcgacgatga aacagagcgc cctgacctgc
     6061 cgccgcgccg gctcttccag ctcgatcctc cgcacggtct cgagatagac ggtcgtgacc
     6121 tgctcgcggg cgcgcagata ggcgacggtc tcggtgcgtg cggagccggc cacgcgaaag
     6181 gcgatgccgc ggcacatgcc gccgcgatcg aggccgagca ccaggccggg acgctccggc
     6241 gtgccgcgat ggacgaacga atagacacag agcgcgcggt gcagcccgat aagccgcgcc
     6301 ggcacccgct cgagaaactc gaacccgggc cgccacatca acgagccata gccgaacacc
     6361 cagaggtccc cggtgttttt cgtgtcggtg ggctttatcc ccctcgtttt caattgcgtc
     6421 gtttccttgc gttgactcgc agcccgattt tcggttggcc tgaaagacga caagaccgca
     6481 gagggaaccg gtctcgtctt tgaaacgccg cactgtgcgc gcgaaacagg aacaatgccg
     6541 ggcgaatctc cccttagcat gatgcggcct tcgcgccagc ggctacacaa gcctgcggcc
     6601 gcgccgcctg tggccggtaa ggccaagcct tcggccgctg ctcctgcgcg gcgccggccg
     6661 ctgtggcgga tactcgtgcc ggtggcaatt gtcgtcgcgc tcgtccccgg ctgggtctgg
     6721 ggctggtact attccgccgc cgtcgcggac cggaccttgg ccggctggat cgagcgggaa
     6781 gctgccgggg gccgtatcta ttcctgtggg tcgcaggcgg tcggcggatt cccgttgcgc
     6841 atcgaggtgc attgcgccga cgcggaagct caggtcaaca gctaccatcc tccttttgcc
     6901 gtcaaggcaa aggacgtgac gttcacggcc cgggtctacc gtccgaccct gctggtgggc
     6961 gacgtgaccg ggccgctcag cctgttcgaa tcgaacgagg cgccgcgcct cgtcgccgat
     7021 tggtcgagag cgcaggtgag cgtgcgcggg ctgccgcccg atcctgacag cgtgtcgttc
     7081 atgctcgacc ggccgcgcct cgaccgggct ggcggtgccg gcgcggccgc agacgtcggg
     7141 gaaatgctgt tcagggccga acacgtcgag ttccacggac gcgttgtcgc gggctcgccg
     7201 cgcaaccatc cggtgatcga ggcggagttg cgcttgacgg ctgccaccgc gccgacgctg
     7261 catccgctcg tcgccgagcc gatacaagcc gaaggcgatg ccgtgctgcg cggcttcacg
     7321 gatctttccc ccaaatcctg ggccgcgcgc ttccgcgaga tgcaggcggc cggtggcagc
     7381 attgaaatca agcatctgcg gatcgcgcgc agcgacgcca ttgtcgtcgg cgcgggaacg
     7441 ctcaacgtga atccgcatgg caagcttgat ggcctcatcc gcatcgcggt cgtcggtgtc
     7501 gaacgcatcg tgccactcct cgggatcgat cagctgatcg ggcgcggcgt tgatcgcctc
     7561 gccggcgttg acaacgcctc gacccagggg cttgcggcgc tcgaccggct gatgccggga
     7621 cttggcggca ccctccgcaa caccgcgaat gcgagcgtga tcgagaacct gaagaagatg
     7681 ggtgagccga ccgagatcga ccacaagccg gcgatcgtgc tgccgctgcg attttccgac
     7741 ggcgcgatct atctcggcat gctgccgctc ggcgatgcgc cggcgctgtt ttgatcgtta
     7801 ctcgcgcggt ctacggatcc ctctcccgcg ggccccggcg gtgttcggca ccccggcttg
     7861 cccggagaag agggtcagcg gtcgcgcccg gcgtgccagc ccaccgccgc gtcgggtatc
     7921 gaatcggtcg aggcgaaata gggcttgaga tcgagcagcg gcgtgtcgtc cacgcaatcg
     7981 aggccgacga ccgacaggtt gttgccgtcg atgcggacga gccgcgccac cgagacggca
     8041 attggattag gccgcaccgg cgagcgcagc gcgaaggtgc cgcgacgctc ggcgtaatga
     8101 tgcggcgcct gcagtacgag gtcgcggcgc gcccggttca tccaatagag caccaccacg
     8161 tggctcacgg tctcgaggcc gctgagcccg gccgtccagc gcggatcgag cgcgatcgtg
     8221 cactcggcat cggattcgcg cgggttcttc gggcaatctt cgcggcgttt ccacggggtg
     8281 cgaatacgtc cgatataata aagcgaggcg tcgaaccgct ccggcagctc gacggcgacc
     8341 tcgccctcgc gcaggccgta tgcgccctgg tcgatttcac tcacgggggc aaattcgcac
     8401 gcgcacggcg ccgccgccaa tagcctctgg gttgcttggg cggcccctcg acctccccct
     8461 tcatgggccg cctcccactg cccttgccaa tttaagcgca taaagatatc tttatgtcgc
     8521 ttgagagtag gtaccccgac cgcgatggat tccgcccagt tgagctttcc ggcccttacc
     8581 gcgaccctaa aggccgcggg cgaggcgacg cgcctgcgcc tgctcgtact catcggcgag
     8641 gccgaactca ccgtctccga cctgaccgcg atcgtacgcc agtcgcagcc tcgcctctcg
     8701 cgccatctgc ggcttttggc cgaggccggg ctggtcgagc gctaccgcga ggggtcgtgg
     8761 gtgttcttcc gcctcggcga gcgcggcagc gccgccgaca tcgcgcgtgc gctgatcgcc
     8821 cggctcgatc cgaacgatcc ggccgtcgcc cgcgatcgcg agcggctggc ggcggtccgc
     8881 gccgcgcgcg ccgccgccgc gcagaattat ttccggcgcc atgctgccga atgggaccgc
     8941 atccgccagc ttcacgtcgc cgacgccgcg gtcgaagcgg cgatccgcgc ggcgctcggc
     9001 gacaagccga tgcgcacgct gctcgatctc ggtaccggca ctgggcggat gctggagctc
     9061 ttcgccggcg atatcgagcg cggcctcggc ctcgatctct cgcgcgacat gctggcgctc
     9121 gcgcgcgccc gcctcgaccg cgccggtttc aagcattgca gcgtgcgcca cggcgacatc
     9181 tacgatctcg ccgtgccgcg cgattccttc gacgtcgtca tcatccatca ggtcctgcac
     9241 ttcctcgacg acagcgcccg cgccatccgc gaggcggcgc gcgtgttgcg gcccggcggg
     9301 cgtctgctca tcgtcgattt cgcgccgcac gacctcgaat tcctgcgcga cgagcacgcc
     9361 catcgccggc tcggctttgc cgccgaaacg atgacgcaat ggctcgaagc cgccgggctc
     9421 gacatcgtcc gcgagcagac gctgccgccc gaaccgcagg gcaagatcgc ggtctcgctc
     9481 tggctcgccc gcgacccgcg cgtggcgctc gccgagccgg caacaacact cgaggtggcc
     9541 tgatgaacgc tccccgcgcc agccgctttg ccaggggcga tgcgccgcga ggcgtgcgcg
     9601 tctcgttcga gttctttccg ccgaagaccg cggaaatgga gcaggcgcta tgggaggcga
     9661 ttggccggct cgcgccgctc aatccgaact tcgtctcggt gacctacggc gccagcggtt
     9721 cgacccgcga acgcacgcac gcgacggtca agcgcatcct cgcggagacg atgctgaccc
     9781 cggcggccca cctcacctgc gtcgcggcga cgcgcgccga cgtcgatgcg gtgatcggcg
     9841 cctacgcgca ggctggcgtg cggcacatcg tggcgctgcg cggcgatccg acgggcggtg
     9901 tcggcgaacg ctacgcgccc catcccggcg gctacggcaa cgccgccgaa ctcgtcgccg
     9961 gcatcaagcg tatcgcgccg gtcgaggttt cggtttccgc ctacccggag aagcatccgg
    10021 acagcccgac ggtcgccgcc gacatcgaca tgctcaaggc caaagtcgat gccggcgcga
    10081 cgcgcgcgat cacccagttc tttttcgaga acgcgcttta tttccgttat ctcgaccgcg
    10141 tgcgcgcgag cggcatcgac atcccggtcg tgccgggcat cctcccggtg cagaatttca
    10201 agcagacgaa gaatttcgcc gcgcgctgcg gcgcttccgt gccggcctgg ctcgccgagc
    10261 ggttcgacgg cctcgacgac gatccggcga cgcgcaagct catcgccgcc gcggtcgccg
    10321 ccgagcaggt gctcgacctc gtcgatcacg gtgtcaccga tttccacttc tacaccatga
    10381 accgcgccga tctcgtgttc gcgatctgtc acctgctcgg cgttcgcccg agcatcgcgc
    10441 ccggcgcttc gcgtcctctt cccgcagggg agagagtggg atgaggtctc ggcaatgacc
    10501 acagccgccg aaacgacact gcgccgtctc gccgctgagc gcatcctcgt gctcgacggc
    10561 gccatgggca cgatgatcca ggcgctgggg ctcaacgagc aaggttaccg cggggcccgc
    10621 ttcgacgcct ggaatcgcga ggtgcgcggc aacaacgacc tgctcaatct cagccggccg
    10681 gatgccgtgc gcggcatcca cctcgcctat ttccgcgccg gcgccgacat cgtctcgacc
    10741 aacacattct cttcgacccg catcgctcaa tccgactacg gcatggccga gatcgcctac
    10801 gaactcaacc ttgaaggcgc gcggctcgcg cgccaggcgg cacaggtcgc cgagaacgaa
    10861 gacgggcgcg cccggttcgt cgccggcgcc attggtccga ccaaccgcac cgcctcgatt
    10921 tcacccgacg tttccaaccc gggcttccgg gccatcacct tcgacgagct gcgcgccgcc
    10981 tacgctgaac aggtgcgcgg cctgatcaac ggtggcgtcg acgtgctgct gatcgagacc
    11041 atcttcgaca cgctcaacgc caaggcagcg atctgcgcga tcgccgaggt gtcggaggaa
    11101 cggcgcctgc gcctgccggt catgatctcc ggcaccatca ccgaccgctc cgggcggctc
    11161 ctttccggac agacgccgga ggcgttctgg aactcggtta cccacgcgcc accgctctcg
    11221 atcggtctga attgcgcgct cggcgccaag cagctgcgcg cgcatattgc cgagctggcg
    11281 cgcgtcgccg atacgttcat ctgcgcctat cccaatgccg ggctgcccaa cgaattcggc
    11341 cattacgacg aaagccccgc cgcaatggcg gcgctgatcg gcgagttcgc cgcggccggc
    11401 ctggtcaaca tcgtcggcgg ctgttgtggc accacgcccg atcacatccg cgccatcacc
    11461 gcggcagtcg cgggcaagaa gccccgcgcc gtcccggcgg tcgcgccact gctgcggctc
    11521 tcgggcctgg aagcgttcac gctcacgccg gagatcccgt tcgtgaacgt cggcgagcgc
    11581 accaacgtca ccggctcggc gcgtttccgc aagctcatca ccgccggcga ttatgccgcc
    11641 gcgctcgccg tcgcccgcga ccaggtggag aacggggcgc agatcctcga tgtgaacatg
    11701 gacgaaggcc tgctcgattc cgagaaggcc atgaccacgt tcctcaacct gatcgccgcc
    11761 gagcccgata tcgcacgcgt gccgctgatg atcgattcct cgaaattctc ggtgatcgaa
    11821 gccgggttga aatgcgtgca gggcaaggcg gtcgtgaact cgatctcgct caaggaaggc
    11881 gaggagtcgt tcatccgcca cgccgagacc gtgcgccgct acggcgcggc ggtcgtggtc
    11941 atggcgttcg acgagaaagg ccaggcggac accctggagc gcaagacggc gatcacggcg
    12001 cgcgcctacg acatcctggt caaccgcgtc ggctttccgc cgcaggacat catcttcgat
    12061 ccgaacatct tcgccatcgc cacgggcatg gaggagcaca acggctacgg cgtcgctttc
    12121 atcgagggcg cgcgctggat caggcagaac ctgccgcacg cccacgtctc cggcggcgtc
    12181 tccaaccttt ccttctcgtt ccgcggcaac gagctggtgc gcgaggcgat gcactcggtc
    12241 ttcctctatc acgccatcgc ggcgggaatg gatctgggca tcatcaacgc cggccagatc
    12301 gcggtctacg acgatgtcga tcgcgaattg cgcgaggcct gcgaagacgt agtgctcaac
    12361 cgccgcactg acgcggccga gcggctgctg gcgctcgccc agcgccaccg cggccacggc
    12421 agggaaaaga aggaggccga cctttcctgg cgcgaatggc cggtggagaa gcgcctgtcg
    12481 catgcgctgg tgcacggcat caccgacttc atcgaagccg atgtcgaaga agcgcggcgc
    12541 aacgcgcccc gcccgctcgc cgtgatcgag ggcccgctca tggacggcat gaacacggtc
    12601 ggcgacctgt tcggctcggg gcgcatgttc ctgccgcaag tggtgaagtc ggcgcgggtg
    12661 atgaagcagg ccgtcgccta tctgctgccg ttcatggagc aggacaagga cgggcgcgcc
    12721 cacacgtcct cgaacggcaa gatcgtgctc gctaccgtca aaggcgacgt gcacgacatc
    12781 ggcaagaaca tcgtcggcgt cgtcctgcaa tgcaacaact acgacgtggt cgatctcggc
    12841 gtcatggtgc cggcagagaa aatcctgcag gcggcgatag ccgaacaggc ggacatcatc
    12901 gggctctccg gcctcatcac tccttcgctc gatgagatgt gccacgtcgc ggcggaaatg
    12961 gagcggcagg gcttcgaggt cccgctgctc atcggtggcg caacgacgag ccgcgtgcac
    13021 acggcggtaa agattcatcc gaactaccgg cgcgggcaga cgatctacgt caatgatgcg
    13081 agccgcgccg tgggcgtcgt ctcctctctg ctcgggcgcg agacgcgcca gcgcgttgtg
    13141 accgagatcc gcgccgagta cgcccgcatc gccgccgcgc atgcgcgcgg cgaagcgacg
    13201 aagcagcgcc tgtcgctcgc cgacgcgcgc gtcaatgggc tgaagctcaa ctggtccggc
    13261 aattacgtgc cgccggcgcc gcatctcatc ggcacccatc ggctccccga cattccaatc
    13321 tccgaactcg tcggctacat cgactggacg ccgttctttg ccacctggga gctcaacggc
    13381 aaattccccg cgatcttcga cgacgccaag atcggcgagg cggcgcgcag cctctacgcc
    13441 gacgcgcagg agatgctcgg acggatcgcc gccgagggct ggttccgcgc cgccgccgtg
    13501 atcgggatct ggccggcgaa cggcgaaggc gacgacattc tgctgtttga caacgaggcg
    13561 cgcagcgagc cgatcgccac gctgcatacg ctgcgccagc aattggcacg gcgcgagggc
    13621 cgctccaatg tcgcgctcgc cgatttcgtg gcgccgcgcg cgagcgcgct tgccgactat
    13681 atcggcgcct tcgcggtgac cacgggcctc ggcgaggatg cggtggtcga gcgcttcaag
    13741 cgcgccaacg acgactactc ggcgatcatg gtcaaggcgc tcgccgaccg cttcgccgag
    13801 gcgctcgccg agcacctgca ccagcgcgtg cgccgggaat tctggggcta cgccgccgac
    13861 gaggcgctcg cccccgccga tctcgtcgcc gagaaatatc gcggcatacg cccggcgccc
    13921 ggctaccccg cgcaacccga ccacagcgag aaggcgacgc tgtttgcgct tctcgacagc
    13981 gagcgcgcga tcggggtgcg gctgaccgag agcttcgcca tttggcccgg cgcttcggta
    14041 tgcggcctct atttcagcca tccggagagc cactacttcg gcgtcggccg catcgaacgc
    14101 gaccaggtcg aagattacgc gaaccgcaag cgctggacgc tcgagcaggc ggagaaatgg
    14161 ctggcgccga tcctcaacta cgatccgctg gcggcggtgc gcagcgccgc ggagtagtcg
    14221 tcagtcgcga tacgc
//
LOCUS       DATMQB010000266         2016 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1959944, whole genome shotgun sequence.
ACCESSION   DATMQB010000266 DATMQB010000000
VERSION     DATMQB010000266.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2016)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2016)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2016
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1959944"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..660)
                     /locus_tag="VNY79_07955"
     CDS             complement(<1..660)
                     /locus_tag="VNY79_07955"
                     /EC_number="2.1.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF044766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HWX72417.1"
                     /translation="MDRDKVKNFADKVFGDMAGAMTAGMGYVGVKTGLFRAMAGKGTM
                     TVDDVARESGLMPRYVEEWLKGMTCAGYLDYDAAGETYRLPDEHAFLLASDDTDHFMG
                     GLFSMVPVLLRTAPDVATAFARGGGVKFEAFGSEAVAGLDLMNRGQYEQRLTSYWLKA
                     LPDAAARLQAGGRALDVGCGAGRVCMALAKNFPAATIVGLDPDKESIRQAETAAAAAG
                     LS"
     gene            complement(711..1646)
                     /locus_tag="VNY79_07960"
     CDS             complement(711..1646)
                     /locus_tag="VNY79_07960"
                     /inference="COORDINATES: protein motif:HMM:NF019474.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HWX72418.1"
                     /translation="MAAAPALAEECRLGPPPHHKGPPVFLDYDQVELDAAYDQVSYEP
                     LIAQVSQRLASNSEAARARIGVPRRAAYGQSDVEKLDIYRTSQPRAPVFVYMHGGTWR
                     WGAAKDAGFPAEMFVNAGAHYVALDFVGVQAVGGDLSVLVAQVRRAIAWIYQNAESFG
                     GDPERIYVGGHSSGGHLCGVALVTEWRNEFGIPDTAVKGGLCMSGMYDLAPVRLSWRS
                     KYLNLTDAMVDALSPQRHIDRIRAPIVVSYGTFETPDFQRQSRDFAAAVKAAGKAVTL
                     LEAPNYAHAEMAETLGNPYGPNGRAALALMQLARG"
     gene            1897..>2016
                     /locus_tag="VNY79_07965"
     CDS             1897..>2016
                     /locus_tag="VNY79_07965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="short-chain dehydrogenase"
                     /protein_id="HWX72419.1"
                     /translation="MAERNATAAVVGAGDFIGAAIAKKFAAEGFTIFAGRRNAD"
BASE COUNT          329 a          661 c          695 g          331 t
ORIGIN      
        1 ggacaatccg gcggcagcgg cggcggtttc cgcctgacga atcgattctt tgtccgggtc
       61 gaggccgacg atggtggccg caggaaaatt cttggcgagc gccatgcaca cccggccggc
      121 gccgcagccc acgtcgagcg cgcggccgcc ggcctgcagg cgggcggcgg cgtcagggag
      181 ggccttgagc cagtagctgg tgagccgctg ctcgtactgg ccgcgattca tcaggtcgag
      241 gccggcgacc gcttcggaac cgaacgcctc gaacttgacg ccgccgccgc gcgcgaacgc
      301 ggtggcgaca tcgggtgcgg tgcgcagcag caccggcacc atgctgaaca ggccgcccat
      361 gaaatggtcg gtgtcgtcgg aagcgagcag gaaagcgtgc tcgtcgggca ggcggtaggt
      421 ttcgccggca gcgtcgtagt cgagatagcc ggcgcaggtc atgcccttga gccattcttc
      481 gacgtatcgc ggcatcaatc ccgactcacg cgcgacgtca tcgaccgtca tcgtcccctt
      541 gccggccatg gcgcggaaca gcccggtctt cacgccgaca tagcccatgc ccgccgtcat
      601 cgcgccggcc atgtcgccga acaccttgtc ggcaaagttt ttgaccttgt ccctgtccat
      661 cgtttcctcg ctttggccgt gaagcgggtt gccgcattgt tcgcggccgg tcaaccgcgc
      721 gcaagctgca tcagggcgag cgcggcgcgg ccgttcgggc cgtagggatt gccgagcgtc
      781 tcggccattt cggcatgcgc gtagttcggc gcctccaaaa gtgtgaccgc cttccccgcg
      841 gccttgaccg cggcggcgaa gtcgcggctc tggcgctgga agtccggcgt ttcgaaagtg
      901 ccgtagctca ccacgatcgg cgccctgatc ctgtcgatgt ggcgctgcgg gctgagcgca
      961 tcgaccatgg cgtcggtcaa gttcaggtac ttgctgcgcc aggaaagccg caccggcgcc
     1021 agatcgtaca tgccgctcat gcacaacccg cccttgacgg cggtgtcggg gattccgaat
     1081 tcgttccgcc actcggtgac cagcgcgacg ccgcagaggt gaccgccgga ggaatggccg
     1141 ccgacataga tgcgctcggg atcgccgccg aagctttcgg cattctggta gatccaggcg
     1201 atggcgcggc ggacctgcgc caccaacaca ctgaggtcgc cgccaacggc ctgcaccccg
     1261 acgaagtcga gcgcgacgta atgcgctccg gcattgacga acatctccgc cggaaaaccg
     1321 gcatccttcg ccgcgcccca gcgccaggtg ccgccgtgca tgtaaacgaa gaccggcgca
     1381 cgaggttggc tggtgcgata gatatcgagc ttttcgacat cggattgacc ataggccgcg
     1441 cgccgcggaa cgccgatgcg cgcccgcgcc gcctcgctgt tgctggcgag gcgttgggag
     1501 acctgagcga tgagcggctc gtaggacacc tgatcgtatg cagcatcgag ctcgacctgg
     1561 tcgtagtcca ggaacaccgg cggacccttg tggtgcggcg gcggaccgag tcggcactct
     1621 tctgcgagcg caggggctgc cgccatggcc gcggccgtgg cgacgatggc ccttcgcgtc
     1681 atggcctgac gaggggaggg cgttctgggt tgcatggtgg ttctcgaaag tttcgccgcg
     1741 agaggatggc gtctggaaaa gtcgaacgtc gcgggcgagc gacgccgcgc gaaccgcggt
     1801 cgacgaattg tgcacgctat ttcatcacct ggacaggtgg cccagaatgc cgcagcgtag
     1861 cggcgccgag cacgccggcg cgcggggagg acggagttgg ctgagcgcaa tgccaccgcg
     1921 gcggtcgtcg gagccggaga tttcatcggc gccgccatcg cgaagaagtt cgccgccgag
     1981 ggcttcacca tcttcgccgg ccggcgcaac gccgac
//
LOCUS       DATMQB010000267         5149 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_95710, whole genome shotgun sequence.
ACCESSION   DATMQB010000267 DATMQB010000000
VERSION     DATMQB010000267.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5149)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5149)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5149
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_95710"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1101
                     /locus_tag="VNY79_07970"
     CDS             <1..1101
                     /locus_tag="VNY79_07970"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HWX72420.1"
                     /translation="SEDVLAELCARLVECGIPLGRAAVFVTTPHPDIMGRSFRWEPGA
                     EVKVSAAPWELMQTAEFRDSPVAAVYRTGELLRRHLDDPNCPDDFAMLRNLRAEGTTD
                     YVAFPLVFTNGHIHVATWTTKRKGGFTPQEFSALESITAPLARVAEVRALQRTAQNLL
                     DTYIGHQAGERIMAGKIRRGYIEAIRAAIWLSDMRGFTTLSERLPPQELIDLLNRYFD
                     AQVPAILESGGEVLKFMGDGLLAIFPIANDDDVAAVCRRALACALAVRDRVAELPRKA
                     EDAEGTRFGLALHAGEVMYGNIGGGNRLDFTCIGPAVNLAARLEKVAAKLGETIVASA
                     AFARHFPGELVSRGEFPVAGFAAPQTVYGFPQ"
     gene            1308..4787
                     /locus_tag="VNY79_07975"
     CDS             1308..4787
                     /locus_tag="VNY79_07975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008872539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indolepyruvate ferredoxin oxidoreductase family
                     protein"
                     /protein_id="HWX72421.1"
                     /translation="MALRDVKLDDKFDLGHSRVFVTGFQALVRLCLMQKELDRRNGLN
                     TAGYITGYRGSPLGGLDGQFLRAAPHLQKNDILFQGGINEDLAATAIWGSQQAELRGE
                     GRHDGVFAMWYGKGPGVDRTGDVFRHANLAGTAKHGGVLALMGDDHTAESSTTAHQSE
                     YHFIDVMIPVLNPAGVQEVLDYGLYGWAMSRFTGAWVALKTMHETIESTAAIDGSLDR
                     VNIVVPTDFQMPEGGLNIRLADPILAQEARLHDFKRDAMLAFVRANKLNRTITSGGRN
                     PKIGIITTGKSYLDVRQAFDELGIDEVACNDLGIRLYKVGCPWPLSRRELAEFAAGLD
                     LVIVVEEKRSLIEVQVREELYGTANQPVCIGKKDEQGNWLFPVKGALDPNEVAICIGE
                     RLLKYRRNDNIAQRVARLKEYQRIAAETRDVAQRIPYFCSGCPHNSSTVVPEGMRAYA
                     GIGCHYMAQWMDRSTLGYTQMGGEGANWVGEAPFSKRNHVFQNLGDGTYNHSGYMAIR
                     AAIAANTNITYKILFNDAVAMTGGQANDGGLTVPQVARQVAAEGAKRVVVVTDEPDKY
                     PAGTAWPPGLTIHHRDDLMAVQKKLAEIPGVTALIYDQTCAAEKRRRRKRRTFPDPDK
                     RVIINELVCEGCGDCGVQSNCVSVQPLETEWGRKRTIDQSSCNKDFSCVKGFCPSFVT
                     VHGAKLKKGMGVAADHDVAPLPEPKLPAIAQTYNIVVTGVGGTGIVTVGGILGMAAHL
                     EGKGVGVLDMAGLAQKGGAVFSYIRFAENPDAIHAIRVAAGRADLVLGGDIVVAGTRK
                     VLGAVKHGATEMVVNTAEFLPGEFTRNADFSLPSERLKRTILADAGRDKTHFIDATRI
                     ATALFGQAIGANMFLVGYAFQLGALPLSAAAIERAIELNGEAVAMNKAAFHWGCRAAV
                     DRAAVEALAKPATAVASDARNLSESFDETVERRVKFLTAYQDAAYAARYRNWVDKAKA
                     AEAARAGGKSGLADAVARYLFKLMAYKDEYEVARLYTDGSFAKQVAREFDGDKLRFEF
                     HLAPPLLARRDETTGLPRKMSFGPWLMPAFGLLAKLKFLRGTRFDPFGRSLERRTERK
                     LIEDYEAMLEEVLGKLSPENHHLAVGLAVIPEKIRGFGHVKQRHLTAAKADEAALLEQ
                     FRTGAPVLLKAAE"
BASE COUNT          902 a         1743 c         1667 g          837 t
ORIGIN      
        1 tcggaagacg tgctggcgga attgtgcgcg cggctggtgg agtgcggcat accgttgggg
       61 cgggccgccg tgttcgtcac gacgccgcac ccggacatca tgggccgcag ctttcgctgg
      121 gagcccgggg cggaagtgaa ggtatcggct gctccgtggg aattgatgca gaccgccgag
      181 ttccgcgaca gcccagtcgc tgccgtctac cgcaccggag agctgctgcg gcgtcatctg
      241 gatgatccca actgtcccga tgatttcgcg atgctgcgca atctgcgcgc cgaaggcacc
      301 accgactacg tcgccttccc gctggtcttc acgaatggcc acatccacgt cgccacctgg
      361 acgacgaagc ggaagggcgg cttcaccccg caggagtttt ccgccctcga atcgatcacc
      421 gcgccgctcg ctcgggtcgc ggaagttcgc gcgctgcagc gcacggccca gaacctgctc
      481 gacacctata tcggccacca ggccggcgag cggatcatgg ccggcaaaat ccgccgcggc
      541 tacatcgagg cgatccgcgc cgcgatctgg ctctcggaca tgcgtggatt taccacgctg
      601 tccgaacggt tgccgccgca ggaattgatc gacctgctca atcgctattt cgacgcacag
      661 gtgcccgcga tcctcgagag cggcggcgag gtgctcaagt tcatgggcga tgggctgctg
      721 gcgatctttc cgatcgccaa tgacgacgat gtcgccgcgg tctgccggcg cgcgctcgcc
      781 tgcgcgctgg ctgtgcgcga tcgtgtcgcc gaattgccgc gcaaggcgga ggacgcggag
      841 ggcacacgct tcggtctcgc gctccacgcc ggcgaagtga tgtacggcaa tatcggcggc
      901 ggcaatcggc tcgatttcac ctgcatcggc ccggcggtga accttgccgc gcggctggag
      961 aaggtcgccg ccaagctcgg cgaaacgatc gtggcttcgg ccgcctttgc ccgccacttt
     1021 ccgggcgaac ttgtgagccg cggcgaattc cccgtcgccg gtttcgctgc accgcaaacc
     1081 gtctacggtt tcccgcagta atcggcgccc aagcgcccgc cgttttcggg gcgactgagc
     1141 cgcaaccgcg gcctgccggt cgcgtggaaa ggatccgctg gccgttgcgg tcgcattgcc
     1201 gcgccgcgcg cgatccctat atctccttgg attcccgcgc cctctggcaa tatcgcagtc
     1261 gcgagggcag actggcccgc aggagggccg actcaatggg ccgactcatg gcgctgcgcg
     1321 acgtcaagct tgacgacaaa ttcgacctcg gccacagccg cgttttcgtc accgggttcc
     1381 aggcgctggt gcggctctgc ctgatgcaga aggagcttga tcgccgcaac ggcctcaaca
     1441 cggcgggcta catcaccggt taccgcggtt cgccgctcgg tgggctcgac gggcagttcc
     1501 tccgcgccgc gccccatctg cagaagaacg acatcctctt ccagggcggg atcaacgagg
     1561 atctcgccgc caccgcgatc tggggctccc agcaggctga attgcgtggg gaaggcaggc
     1621 acgacggcgt cttcgccatg tggtacggca aggggccggg cgtcgaccgc accggcgacg
     1681 tcttccgcca cgccaacctt gccggcaccg ccaagcacgg cggcgtgctg gcgctgatgg
     1741 gcgacgacca taccgccgaa tcctcgacca ccgcgcatca atccgaatac cacttcatcg
     1801 acgtgatgat cccggtgctc aatcccgccg gggtgcagga agtgctcgac tacgggctct
     1861 acggctgggc gatgtcgcgc ttcaccggcg cctgggtggc gctgaagacg atgcacgaga
     1921 ccatcgagtc gacggcggcg atcgacggca gcctcgaccg cgtcaacatc gtcgtcccga
     1981 ccgactttca gatgccggaa ggcggcctca acatccgcct cgccgatccg attttggcgc
     2041 aggaagcgcg actgcacgat ttcaagcgcg acgccatgct cgccttcgtg cgcgccaaca
     2101 agctcaaccg cacgatcacc tcgggcgggc gcaatccgaa gatcggcatc atcaccaccg
     2161 gcaagagcta tctcgatgtg cgccaggcgt tcgacgaact cggcatcgac gaggtcgcct
     2221 gcaacgatct cggcatccgc ctctacaagg tcggctgccc ctggccgctc agccggcgcg
     2281 agctcgccga atttgccgcc gggctcgatc tcgtcatcgt cgtcgaggag aagcgctcgc
     2341 tcatcgaggt tcaggtacgc gaggagcttt acggcaccgc gaaccagccc gtgtgcatcg
     2401 gcaagaagga cgagcagggc aactggctgt tcccggtaaa gggtgcgctc gatcccaacg
     2461 aagtcgcgat ctgcatcggc gagagactgc tgaaatatcg ccgcaacgac aacattgcgc
     2521 agcgcgtggc gcggctcaag gaatatcagc gcatcgccgc cgagacgcgc gacgtcgccc
     2581 agcgcattcc gtatttctgc tcgggctgcc cgcacaattc ctcgaccgtg gtgccggaag
     2641 ggatgcgcgc ctatgccggc atcggctgcc actacatggc gcagtggatg gaccgctcga
     2701 cgctcggcta tacgcagatg ggcggcgagg gcgcgaactg ggtcggcgag gcgccgttct
     2761 ccaagcgcaa tcacgtcttc cagaatctgg gcgacggcac ctacaaccat tccggctaca
     2821 tggcgatccg cgcggcgatc gccgccaaca ccaacatcac ctacaagatc ctgttcaacg
     2881 acgccgtggc catgaccggc ggccaggcca atgacggcgg tctgaccgtg ccgcaggtgg
     2941 cgcgtcaggt cgccgccgag ggcgccaagc gcgtcgtcgt ggtgaccgac gaaccggaca
     3001 aatatccggc cgggacggcg tggccgccgg ggctgaccat ccatcatcgc gacgatctga
     3061 tggcggtgca gaagaagctg gcggaaattc ccggcgtcac cgcgctgatc tacgaccaga
     3121 cctgcgcggc ggaaaagcgc cgccgccgca agcgtcgtac gtttcccgat cccgacaagc
     3181 gcgtcatcat caatgaactg gtctgcgaag gctgtggcga ttgcggcgtc cagtcgaatt
     3241 gcgtgtcggt gcagccgctc gagaccgaat gggggcgcaa gcgcaccatc gaccagtcga
     3301 gctgcaacaa ggacttttcc tgcgtcaagg gattctgccc gtcgttcgtc acggtgcatg
     3361 gcgccaagct gaagaagggt atgggtgttg ccgccgacca tgatgtcgcg ccgctgccgg
     3421 agccgaagct gccggccatc gcccagacct acaacatcgt cgtcaccggc gtcggcggca
     3481 ccggcatcgt caccgtcggc ggcattctcg gcatggcggc gcatctcgag ggcaagggcg
     3541 tcggcgtgct cgacatggcc ggtctcgcgc agaagggcgg ggcggtgttc agctacatac
     3601 gcttcgccga gaatcccgac gccatccacg cgatccgcgt cgccgccggt cgcgccgatc
     3661 tcgtgctcgg cggcgacatc gtggtcgccg gcacccgcaa ggtgctcggc gcggtcaagc
     3721 acggcgcgac cgagatggtc gtcaacacgg ccgagttcct gcccggcgaa ttcacccgca
     3781 acgccgactt ctcgctgccg agcgaacgtc tcaagcgcac catcctcgcc gatgccggcc
     3841 gcgacaagac gcatttcatt gatgccacgc gcatcgcgac tgcgctgttc gggcaggcga
     3901 tcggcgccaa catgtttctc gtcggctacg cctttcagct cggcgcgctg ccgctctcgg
     3961 cggccgccat cgagcgggcg atcgagctca acggcgaggc ggttgccatg aacaaggcgg
     4021 ccttccactg gggctgccgc gccgccgtcg atcgcgccgc cgtcgaagcg ctggcaaagc
     4081 ccgcgaccgc ggtcgccagc gatgcccgca acctctcgga atccttcgac gagacggtgg
     4141 agcggcgggt gaagttcctc accgcctatc aggacgccgc ctacgcggcg cgctatcgga
     4201 attgggtcga caaggcgaaa gcggccgagg ccgcgcgggc gggcggcaag agcggcctgg
     4261 ccgacgccgt cgcccgctat ttgttcaagc tgatggccta caaggacgaa tacgaagtcg
     4321 cgcggcttta taccgacgga tcattcgcca agcaggtggc gcgcgaattc gacggcgaca
     4381 agctgcgctt cgagtttcac ctggcgccgc cgctcctggc ccgtcgcgac gagaccaccg
     4441 ggcttccacg caagatgagt ttcggcccct ggctcatgcc ggctttcggc ttgctggcga
     4501 agctcaaatt cctccgcgga actcgcttcg atccgttcgg ccgctcgctc gagcgccgca
     4561 ccgaacgcaa gctgatcgag gactacgagg cgatgctgga ggaagtgctc ggcaagctca
     4621 gcccagagaa ccatcacctt gccgtcggcc tcgccgtgat tccggaaaag attcgcggct
     4681 tcggtcatgt caagcaacgc catctcacgg cggcgaaggc ggacgaggcc gccctgttgg
     4741 agcaattccg caccggcgcg ccggtgctgc tcaaggccgc ggaatagccg gaacgctccg
     4801 gcacggactg ccgtcacgat cagtccataa ttcctttaca tttgcggcgg caggatgcgg
     4861 cccgctgcgg gagttccgcc ggcgacaagg ggcctgtcgc ggccaagctt caggcaggcc
     4921 gtttgcggcc agtgcgaggc ggtcaacaag cctccggccg gtgacggttg cggcgagcgc
     4981 gcacttcgtc tcaaatcgag tatgctccaa caatgaacga atcactgcca atgccaggta
     5041 tcagaggcga gccgaccgac gcgcctgcag aactccccga agcggaggag atgccgcacg
     5101 tgaccaacgg tccgacggtt gcgccggcgc ccagcgaggc gatcgcggc
//
LOCUS       DATMQB010000268         5897 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1341736, whole genome shotgun sequence.
ACCESSION   DATMQB010000268 DATMQB010000000
VERSION     DATMQB010000268.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5897)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5897)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5897
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1341736"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            288..887
                     /locus_tag="VNY79_07980"
     CDS             288..887
                     /locus_tag="VNY79_07980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NnrU family protein"
                     /protein_id="HWX72422.1"
                     /translation="MGLAVEILGLVLFLGAHVFVTMRNQRGALISSMGFGPYRGLFAL
                     VAIAGLVLIGFGFARYRAAGVIPLWYPPAWTRHIVVAAMWPASIAFVAAYLPGNIKRV
                     LKHPMLVGVKLWAAAHLCANGDLGGIVLFGAVLAWAVYDRITLKRRSDPGAPAIPAGG
                     WRNDAIAVVVGTVFYLALGFVFHPIVIGVPAFATSALGH"
     gene            1184..1837
                     /locus_tag="VNY79_07985"
     CDS             1184..1837
                     /locus_tag="VNY79_07985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HWX72423.1"
                     /translation="MTDIFQEVDEEVRREQLKKLWQRYGNFIIAACLLVVVAVGAWRG
                     YEWWETKKAAENGAAFEQAVTLAESGKQQEAEAAFAKLATDGSAGYRVLARLREAAEL
                     ARTDRKAAIASYDEIAADRSAGQVIQDLAALRTGYLLVDSAPYGEVRARLEPLTAPER
                     TFRHSARELLALSAWKGGEMGAARQWTDAIMTDPHTPPGTRSRAEVLSELITSSGKG"
     gene            1862..2398
                     /locus_tag="VNY79_07990"
     CDS             1862..2398
                     /locus_tag="VNY79_07990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018317606.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72424.1"
                     /translation="MLVRTASVLAVVLAIAGCTQGGQFDPTEVLAADPFGTKKKLQGE
                     REPLFPSGVPGAESGVPHDLVKGYQPPPEQTAEETVGTIKPPAAAAEAKPKPKPKPKP
                     KVARAPAAAPAGQDPAWGQSSAAPPQQRHDPAWDQKSGSPQQSVWPAPQSAAPAQQTA
                     QPAQSVWPNPQAPNTSSR"
     gene            2466..3830
                     /gene="der"
                     /locus_tag="VNY79_07995"
     CDS             2466..3830
                     /gene="der"
                     /locus_tag="VNY79_07995"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0043022 - ribosome binding [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HWX72425.1"
                     /translation="MSFTIAIVGRPNVGKSTLFNRLVGARRALVDDEPGVTRDRREGA
                     GRLGDLSFTVIDTAGLEEAERESLSARMQAQTGAAMAQADTVLFLVDARAGATAADRV
                     FANLVRRSGKPAILVANKCEGRAGEAGALEFYALGLGEPVAISAEHGEGLAGLYEALR
                     AALPEATAAPEAKEDRSATTEESPIRLAVVGRPNTGKSTLINRLLGEERMLTGPEAGI
                     TRDAIAVDLDWRGRRLRIHDTAGLRRRSRIAEKLEKLSVADALNAIRFAEVVIVLLDA
                     QTLFEEQDIRIADLVEREGRAVVIGINKVDMVEREPGARARLREQVDRLLPQIKGVPV
                     VALSARTGEGLDALMAAVIEAHAVWNRRAPTAALNRFLAQAATAHPPPAAKGRRLRLD
                     YITQPKARPPTFVLFSSRAQELPEAYRRYLINALREAFALPGTPIRLTLRAKANPYAG
                     RKRR"
     gene            3830..5071
                     /locus_tag="VNY79_08000"
     CDS             3830..5071
                     /locus_tag="VNY79_08000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TCR/Tet family MFS transporter"
                     /protein_id="HWX72426.1"
                     /translation="MEKPVDELNAKPGAPWRRAAFVFIFATILLDMLAIGIIIPVLPK
                     LVVDFVGGDTEYAATIFGLFGTAWALMQFAFSPIQGALSDRFGRRAVILISNFGVGLD
                     YVLMALAPSLAWLFVGRVISGITAASMATSYAYVADVTPPDRRAARYGLLGAAFGAGF
                     VFGPALGGYAGSISPRLPFWIAAGLSLANWCYGLLVLPESLPRSQRSPFDWRKANPFG
                     ALMLLRSHAELFGLAGVSFLGNLAHAVLPSVTVLYMFYRYGWDERTVGLTMAGVGVAA
                     IIVQGIVVGPVTARIGERPALMVGLAFGVAGFVVVALAQAGAGFLASIPLLALWGLAN
                     PGLLALMSRFVSASEQGQLQGANASIMGIANLFGPGLFTLAFAFAIGGGARWHLPGLP
                     FLIAAMLLAAASFLAWRVTRR"
     gene            complement(5101..5325)
                     /locus_tag="VNY79_08005"
     CDS             complement(5101..5325)
                     /locus_tag="VNY79_08005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72427.1"
                     /translation="MTTIRTACILATLTAGLFAASAGAQDKTLYQRLGGYDAIAAVTD
                     EFIGRLATDDQEKRFFVGFSIQSSTKTDIC"
     gene            complement(5406..>5897)
                     /locus_tag="VNY79_08010"
     CDS             complement(5406..>5897)
                     /locus_tag="VNY79_08010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HWX72428.1"
                     /translation="RLDALVGNAAIAGVPSPLDHIEPKAWDEAFAVNVTANWHLIRAM
                     DPLLRRSDAGRAVFVTSRAATLARAYWAPYSVSKAALDVLARTYAAETSSTAVRVNLF
                     DPGATRTRMRAMVMPGEDPMTLPTPAEVAEQISGLCLPGFAETGKLYEFRSGKLLQFM
                     PPA"
BASE COUNT          920 a         1926 c         2002 g         1049 t
ORIGIN      
        1 tctcaacgtc caggaagtca aggccgggct gaatttccgc ttcgggccgt gaggcgctca
       61 attcccattc agataagatg agcccgcgaa cgggcgcctg acggcaatgg cgcctcttgc
      121 gcgccaccgg attctgtttg gatcggtcgg accgccgcgt gcctgggccc gcgagcgccc
      181 gtcattgaca agcgacggcg tcccgccatg atcggccgcg aacccgcgtg atacgcggtc
      241 gccgaccgat caggccgaaa tctccttttc agagcagcgg ctcagccatg ggtctcgccg
      301 tcgaaatttt aggactcgtc ctgttcctcg gggcgcacgt cttcgtcacc atgcgcaacc
      361 agcgcggcgc gttgatctcc agcatgggtt tcgggccgta ccgcggcttg ttcgcgctgg
      421 tcgcgatcgc cggcctcgtg ctgatcggct ttggcttcgc ccgttatcgt gccgccggtg
      481 tcatcccgtt gtggtatccc ccggcatgga cgcgccacat cgtcgtcgcg gcgatgtggc
      541 cggcgagcat cgcgttcgtc gccgcctatc ttcccggcaa tatcaagcgg gtgctcaagc
      601 atccgatgct agtgggggtc aagctctggg ctgccgcgca cctttgtgcg aacggcgacc
      661 tcggcggcat cgtcctgttc ggcgcggtgt tggcctgggc ggtctatgac cgcatcacct
      721 tgaagcgccg cagcgatccg ggagctccgg cgattccggc cggtggatgg cgtaacgacg
      781 cgatcgccgt cgtggtcggc accgttttct acctggccct cggcttcgtg ttccatccga
      841 tcgtcatcgg cgtgccggcc ttcgcaacat cggcgctcgg acattaacca tccggcaacc
      901 tgacggtgcc caacgccagg cccatccccg ccaaggcggc gagccattct tgatgaggcg
      961 ccgcgcgcga gcgtttttgc cgaatcgccg caggcccggg agaggctttg ccttcctcgt
     1021 gccacaagat taggttagcg gctgcaacgg cttttccgcg cctaaccgcg cggaatcgct
     1081 tggttttgtc cgttcctgta gcggaagcgg atgcggcgcc gccggcgcag gctggggcgg
     1141 tgcgcaactg gggcgcgacg aaggtggtgc tggggcaggt cctgtgaccg atatcttcca
     1201 ggaagtcgac gaggaagtac gccgcgaaca gctcaagaag ctgtggcagc gctacggcaa
     1261 ttttatcatc gccgcctgtc ttctcgttgt cgtcgcagtg ggggcgtggc gcggttacga
     1321 atggtgggaa accaagaaag ccgccgagaa cggcgccgcc ttcgagcagg cggtcacgct
     1381 cgcggaatcg ggcaagcagc aggaggcaga agctgccttc gccaagctcg ccaccgatgg
     1441 cagcgccggg tatcgcgtgc tggcgcgcct gcgcgaagca gccgagctcg cccggaccga
     1501 ccgcaaggcc gcaattgcct cctatgatga aatcgctgcc gatcggagcg ccgggcaggt
     1561 gatccaggat cttgcggcgc tacgtaccgg gtacttgttg gtggacagtg cgccttacgg
     1621 cgaggtgcgc gcgcggctcg agccgttgac ggcgccggag cgcaccttcc ggcacagcgc
     1681 gcgcgagctt ttggctcttt cggcctggaa ggggggcgag atgggcgcgg cgcgacaatg
     1741 gaccgatgcg atcatgaccg atccgcacac gcccccgggc acgcgcagcc gcgcagaggt
     1801 tttgagtgag ctcatcacct cgagcggcaa gggctgagcc atgatcgcgc gaccgcttca
     1861 catgctggtt cgcactgctt cggtactcgc cgtcgtgctt gcgattgccg gctgcacaca
     1921 gggcggccaa ttcgacccga cggaagtgct ggcagcagat ccgttcggta ccaagaagaa
     1981 gctccagggc gagcgcgagc cgctgttccc cagcggggtg cctggcgcgg agagtggcgt
     2041 gccgcacgat ctggtcaagg gttaccagcc gccgccggag cagacggcgg aggagaccgt
     2101 cggtactatc aaaccgccgg ccgcggcggc cgaggcaaag ccgaaaccaa aaccgaaacc
     2161 caagccaaag gtcgcgcgcg cacccgcggc agcaccggcg gggcaggacc ctgcctgggg
     2221 ccagagttcg gcggctccgc cgcagcagcg gcacgacccg gcctgggatc agaaatccgg
     2281 gtctccgcaa cagtcggtct ggccggctcc acagtcggcg gctccggccc agcaaacggc
     2341 gcagccagcg caatcggtct ggcctaatcc ccaggcgccc aatacgtctt cgcgttgatc
     2401 attttggata agagacccgg cgcggaagcg acgtcgtgct tttggccgtc cccgcaggtc
     2461 gcgtcatgtc cttcaccatc gcaattgtcg gccggcccaa tgtgggcaag tcgaccctgt
     2521 tcaaccggct tgtcggcgcg cggcgggcgt tggtggacga cgagccgggg gtcacccggg
     2581 atcgccgaga aggcgccggc aggctcggcg atctctcctt tacggtgatc gacaccgcgg
     2641 ggcttgagga ggctgagcgg gaaagccttt cggcaagaat gcaggcgcag accggggcgg
     2701 ccatggcgca ggccgatacc gttctctttc tcgtcgacgc ccgcgctggc gcaacagcgg
     2761 cggatcgcgt gttcgccaac ctcgtgcgcc ggtcgggcaa gcccgccatc ctcgtcgcca
     2821 acaaatgcga aggccgtgcc ggcgaagcgg gcgcgctcga attctatgca ctggggcttg
     2881 gggaaccggt cgccatcagt gccgagcacg gcgaggggct ggccggcctc tatgaggcgc
     2941 tacgcgcggc attgcccgag gcgacggccg ctcccgaggc gaaggaagat cgaagcgcca
     3001 ccacggaaga aagcccgatc cgtcttgcgg tcgtcgggcg cccgaacacc ggaaagtcga
     3061 cgctgatcaa ccgcctgctc ggcgaggaac ggatgttgac cggccccgag gcgggaatca
     3121 cgcgcgacgc gattgccgtt gatcttgact ggcgcggacg gcgtctgcgc atccacgaca
     3181 ccgcgggttt gcgtcgccgc tcgcgcatcg cggaaaaact cgaaaagctt tccgtcgcgg
     3241 acgccctcaa cgccatccgc tttgccgagg tcgtgatcgt gctgctcgat gcgcaaacgc
     3301 ttttcgagga acaggacatc cgcatcgccg atctggtgga gcgggaaggg cgtgcggtcg
     3361 tcatcgggat caacaaggtc gatatggtcg agcgcgagcc gggcgctcgc gcacgtctgc
     3421 gcgagcaggt cgatcgtctg ctgccgcaga tcaagggagt gccggtcgtc gccctctcgg
     3481 cacgcacggg cgaggggctc gacgcgctga tggcggcggt gatcgaggct cacgctgtct
     3541 ggaaccgccg cgcgccgacg gccgcgctca accgtttcct cgcccaggcg gctacggcgc
     3601 acccgccgcc cgccgcgaaa ggccgcaggc tgcggctcga ctacatcacg cagccgaaag
     3661 cgcggccgcc gaccttcgtt ctcttctcct cgcgcgcgca ggagcttccc gaggcgtacc
     3721 gccgctacct tatcaacgcc ctgcgcgagg cgttcgcgct gccgggcaca ccgatcaggc
     3781 tcacgctgcg cgcgaaggca aatccttatg cgggccggaa gcgccgctga tggagaaacc
     3841 tgtcgacgag ttgaacgcaa agcctggcgc gccctggcga cgggcggcct ttgtcttcat
     3901 cttcgcgaca atcctcctcg acatgctcgc catcggcatc atcattccgg tgctgccgaa
     3961 gctcgtggtc gatttcgtgg gcggcgacac ggaatatgcg gccacgattt ttggcctttt
     4021 cggcaccgcc tgggcgctga tgcagttcgc gttctcgccg atccagggcg cgctgtccga
     4081 ccgcttcggt cgtcgcgccg tgatcctgat ttccaacttc ggcgttggac ttgactacgt
     4141 gctcatggcg ctggcgccaa gcctggcgtg gctcttcgtc ggccgggtga tctccggcat
     4201 caccgcggcg agcatggcca cttcgtacgc ctatgttgcc gacgtgactc cgcctgaccg
     4261 gcgcgcggcg cgctacggtt tgctcggcgc tgcctttggg gccggattcg tgttcgggcc
     4321 ggcgctcggc ggatacgccg gcagtatctc cccgcggctg ccgttctgga tcgccgccgg
     4381 cttgagcctc gccaactggt gctacggatt gctggtgctg ccggaatcgc tgccgcgctc
     4441 gcagcgctcg ccattcgact ggcgcaaggc caatccgttc ggcgcgctca tgctgctgcg
     4501 ctcgcacgca gaattgttcg gacttgccgg ggtcagcttc ctcggcaatc tcgcccatgc
     4561 cgtcctgccc agcgtcaccg tcctttacat gttctaccgg tacggctggg acgagcggac
     4621 cgtcggcttg accatggctg gcgtcggtgt ggccgcgatc atcgtgcagg gaattgtggt
     4681 cgggccggtg accgcgcgga tcggcgagcg ccccgcattg atggtggggc tcgccttcgg
     4741 cgtcgcgggc ttcgtggttg tcgcgctggc gcaggcgggc gccggcttcc tggcaagcat
     4801 tccgctcctc gcgctctggg gattggcgaa cccggggctg ctcgctctga tgagccgttt
     4861 cgtcagcgct tcggagcagg gtcagcttca gggcgccaat gcgagcatca tgggcatcgc
     4921 caatctgttc gggcccgggc tctttacgct cgcgttcgcg ttcgcgatcg gcggcggagc
     4981 tcgatggcac ctgcccgggt tgccgttctt gatcgcggca atgctgctcg cggccgcctc
     5041 cttccttgcg tggcgcgtga cgcggcgcta gtgcgtgcga atgttagaaa caaaggacca
     5101 ctagcaaata tcagtcttag tggagctttg gatggagaac ccgacgaaga agcgcttctc
     5161 ctggtcgtcg gtggcgaggc ggccgatgaa ctcgtcggtg acggcggcaa tggcgtcata
     5221 cccgccgagc cgttgataga gcgttttgtc ctgcgcgccc gccgaggcgg cgaagaggcc
     5281 agccgtcagc gtggcaagga tacaggcagt ccggatcgtg gtcatgggta tcccctttgg
     5341 cagtccgaat gaaagtcgaa tggaggtacg cgcgacccgc tccggagttt cacgcggctg
     5401 ctgcgtcatg cgggaggcat gaactgcagg agcttgccgc tgcggaattc gtaaagcttg
     5461 ccggtctcgg caaagcccgg cagacataga ccgctgatct gctccgctac ttcagccggc
     5521 gtcggcagcg tcatcgggtc ttctcccggc atgaccatcg cgcgcatgcg cgtgcgcgtc
     5581 gcgccgggat cgaacagatt gacgcgcact gcggtcgaac tcgtctccgc cgcataggtc
     5641 cgcgccagca cgtcgagcgc cgccttggac accgaatagg gggcccaata ggcgcgggcg
     5701 agggttgcgg cgcgcgaggt gacgaatacc gcccggccgg catcggagcg ccgcaacagc
     5761 gggtccatcg cgcggatgag gtgccagttg gcggtgacgt tgaccgcgaa tgcctcgtcc
     5821 cacgccttcg gctcgatatg gtcgagcggg gaaggcaccc ccgcgatcgc cgcattgccg
     5881 acgagcgcgt cgaggcg
//
LOCUS       DATMQB010000269         2063 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_400630, whole genome shotgun sequence.
ACCESSION   DATMQB010000269 DATMQB010000000
VERSION     DATMQB010000269.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2063)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2063)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2063
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_400630"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..464
                     /locus_tag="VNY79_08015"
     CDS             <1..464
                     /locus_tag="VNY79_08015"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72429.1"
                     /translation="RVCRIVAAMSTDDEKCKRLADLVQRDLERAIFGDPAATANQLPG
                     LRLRAQDVIAECNRQLRFARRAQVAFVVDTAHPGPPIRYETPNEGLRVELSWRQASIV
                     HEHWPLRLSKVLSAEAAEFVPASGLFGEWVPKQLPAPPYELSPDDLDPRGR"
     gene            complement(839..1435)
                     /gene="phaR"
                     /locus_tag="VNY79_08020"
     CDS             complement(839..1435)
                     /gene="phaR"
                     /locus_tag="VNY79_08020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate synthesis repressor PhaR"
                     /protein_id="HWX72430.1"
                     /translation="MTKTAEPITIKKYANRRLYNTGTSTYVTLEDLAAMVKKGEDFVV
                     YDAKTGEEITRSVLTQIIFEQENKEGQNLLPIAFLRQLIRFYGDSMQMLVPRYLEVSI
                     ESLTREQEKFRQQLAQTFGVGAFPSLEEQVRRNMDMFERAFAMFAPFARREAQAGEAA
                     AEPGKPASKTGDIDDLKRQLEEMQKKVDRLSEKGPGGS"
     gene            1669..>2063
                     /locus_tag="VNY79_08025"
     CDS             1669..>2063
                     /locus_tag="VNY79_08025"
                     /EC_number="2.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643534.1"
                     /note="Catalyzes the synthesis of acetoacetyl coenzyme A
                     from two molecules of acetyl coenzyme A. It can also act
                     as a thiolase, catalyzing the reverse reaction and
                     generating two-carbon units from the four-carbon product
                     of fatty acid oxidation; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA C-acetyltransferase"
                     /protein_id="HWX72431.1"
                     /translation="MKDDIVIVGAVRTPVGAFNGAFASLPAHDLGKVAIKAAIDRAGV
                     EPARVSEVILGQILQAGQGQGPARQASINAGIPVEVPAWSVNQLCGSGLRAVALGYQG
                     IVNGDSEIAVVGGQESMSMAPHCAHLRSGV"
BASE COUNT          332 a          666 c          692 g          373 t
ORIGIN      
        1 tccgtgtttg tcgtatcgtc gcggcgatga gcaccgatga cgagaaatgc aaaagactcg
       61 ctgacctagt gcagcgcgat ctggagcggg cgatctttgg cgatcccgct gcgaccgcga
      121 accaacttcc cggactccgt ctgcgggctc aggatgtgat cgccgagtgc aaccggcagc
      181 ttcgcttcgc cagacgcgcc caggtggcgt tcgtcgtcga cacggcgcac ccgggaccgc
      241 cgatccgcta cgaaacgccg aacgaaggcc tacgcgtcga attgtcgtgg cgccaagcca
      301 gcatcgtgca cgagcactgg ccgctgcggc tgtccaaggt gctgtcggcg gaagccgcgg
      361 aattcgtccc ggcgagcggg ttgttcggcg agtgggtgcc gaagcagctg ccggcgccgc
      421 cgtacgaact atcgcccgac gacctggacc cgagagggag gtgatgcctt ctgcacggcg
      481 agcgtagcgg gctcagctcc cggtttcgga agcgccctat ttttgggcct aaaacgcatc
      541 gttttgcacg gccataggca tccggatttg acctccgaga agccgccgtt atcgccgcgc
      601 cgaatgccgg cttcgcggaa cttgcagaag tagcgcccga ccgtccgctc gcagacatct
      661 gccgcaagca tcgtcgccgt catggccgga cttgttccgg ccatccacgt cttttgcaat
      721 gggcaggcat ttaagacgtg gatccccgcg acgagcgcgg gcatgaccag tcagagctct
      781 tatttgcgcc gagtttgcca ctggattccc gctgtcgcgg gaatgagcga gaaataggtc
      841 agctgccgcc ggggcccttc tcgctcagcc ggtcgacctt cttctgcatc tcctcgagct
      901 ggcgcttgag gtcgtcgatg tcgccggtct tggacgccgg cttgcccggc tccgcggcag
      961 cctcgcccgc ctgcgcctcg cgccgggcga agggcgcgaa catggcgaag gcgcgctcga
     1021 acatgtccat gttccggcgc acctgctcct ccagcgaggg gaaggcgccg acgccgaaag
     1081 tctgcgccag ctgctggcgg aacttctcct gctcgcgggt gagcgactcg atcgagactt
     1141 cgagatagcg cgggaccagc atctgcatgc tgtcgccgta gaagcggatg agctgccgca
     1201 ggaaggcgat cgggaggaga ttctgccctt ccttgttctc ctgctcgaag atgatctggg
     1261 tcaggaccga gcgggtgatc tcctcgccgg tcttggcgtc gtagaccacg aaatcctcgc
     1321 ccttcttgac catggcggcg agatcttcga gcgtgacgta ggtgctggta ccggtgttgt
     1381 agaggcgccg gttcgcgtac ttcttgatcg tgatcggctc ggcggtcttg gtcatggact
     1441 cgggcatcag gcgggaaccg ctggctatct gccgtcaaaa taggcgcttt ccccggtcgc
     1501 ggctaccgtt ttgtgagacg gcgcggcggc ggcggacggc cgggcatggc agcactgccg
     1561 ccgcagccgc cttgtcggca ggcgcccccg tcactatgac ataggtcaaa gacgccgcgg
     1621 cgagcccgcg cttgaattgc ctccagcatc agcccgaaag gacctgccat gaaagacgac
     1681 atcgtcatcg tcggcgcggt acgcacgccg gtcggcgcat tcaacggcgc gttcgcgtcg
     1741 ctgcccgccc acgatctcgg caaggtcgcg atcaaggccg cgatcgatcg cgccggcgtc
     1801 gagcccgcgc gcgtgtcgga agtgatcctg gggcagatcc tgcaggcggg ccagggccag
     1861 ggaccggcgc gccaggcttc gatcaatgcc ggcatcccgg tcgaggtccc ggcctggagc
     1921 gtcaaccagc tgtgcggctc ggggctgcgc gcggtggcgc tcggctatca gggcatcgtc
     1981 aacggcgatt ccgagatcgc ggtcgtcggc ggccaggagt cgatgagcat ggctccgcac
     2041 tgcgcgcatc tgcgcagcgg cgt
//
LOCUS       DATMQB010000270         3231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3811035, whole genome shotgun sequence.
ACCESSION   DATMQB010000270 DATMQB010000000
VERSION     DATMQB010000270.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3231
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3811035"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2..688
                     /locus_tag="VNY79_08030"
     CDS             2..688
                     /locus_tag="VNY79_08030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009737339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HWX72432.1"
                     /translation="MEDDSATAQSIELMLKSESFNVYTTDLGEEGIDLGKIYDYDIIL
                     LDLNLPDMSGFEVLRSLRVSKVKTPILILSGLVGIEDKVRGLGFGADDYMTKPFHKDE
                     LVARIHAIVRRSKGHAQSVIQTGDLVVNLDTKTVEVNGARVHLTGKEYQMLELLSLRK
                     GTTLTKEMFLNHLYGGMDEPELKIIDVFICKLRKKLANASNGKNYIETVWGRGYVLRE
                     PIEAEARIPA"
     gene            complement(890..1771)
                     /locus_tag="VNY79_08035"
     CDS             complement(890..1771)
                     /locus_tag="VNY79_08035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008983 - protein-glutamate
                     O-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_process: GO:0032259 - methylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HWX72433.1"
                     /translation="MTPLDYDFLRKSLKERSGLVLSADKQYLAESRLLPVARKAGLGT
                     LSELVAVLKRGNAEALMTAVVEAMMTNESLFFRDKVPFEHFRSTILPALKAARRTSRT
                     IRIWCAAAATGQEPYSLAICLKEMERDIADWRIDILATDLSNEVLGKARAGIYSQFEV
                     QRGLPIHLLIKYFTQSNDMWQLTPNIRGMVKYRQVNLMSDFSHLGMFDLIFCRNVLIY
                     FDQQTKVDLLDRLAQVTAADGYLVLGAAETVVGLTDSFTTVPDKRGLYAPNPRLPLRW
                     AAAGKPGPRLVAASGGR"
     gene            complement(1768..2937)
                     /locus_tag="VNY79_08040"
     CDS             complement(1768..2937)
                     /locus_tag="VNY79_08040"
                     /EC_number="3.1.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0008984 - protein-glutamate methylesterase
                     activity [Evidence IEA];
                     GO_function: GO:0050568 - protein-glutamine glutaminase
                     activity [Evidence IEA];
                     GO_process: GO:0006482 - protein demethylation [Evidence
                     IEA];
                     GO_process: GO:0006935 - chemotaxis [Evidence IEA];
                     GO_process: GO:0018277 - protein deamination [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis response regulator protein-glutamate
                     methylesterase"
                     /protein_id="HWX72434.1"
                     /translation="MSIAVAAASPAASADRPIRVMVVDDAVVARSLLRGWIDAEPDMK
                     VVAALRTGRQAVDAIEHHDADVVMLDVDMPELDGISALPLLLKKKRGLVVIMVSTLTR
                     RSAEVSLRALSLGAADYVPKPEAAPDAATSVAFRRELIEKVRTLGRGHSALRALAPAA
                     VPAADPSLRRALRPGGGLPLAAGTSTVNLRPFSLAAPRALLIGSSTGGPQALSALLAT
                     LTAAIDRAPVLIAQHMPPTFTAVLAEHLKGAAGRDAHEGEDGEPVLAGGIYVAPGGRH
                     MRVVRGPGGVRIALDDDPPINFCKPAVDALFSSAAAAWGAGNLALVLTGMGTDGTRGA
                     ADLVAAGGSVIAQDEATSVVWGMPRSVAQAGLCSAVLPLDQIAANVTRLFFGDRQ"
     gene            complement(3078..>3231)
                     /locus_tag="VNY79_08045"
     CDS             complement(3078..>3231)
                     /locus_tag="VNY79_08045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HWX72435.1"
                     /translation="GGDKPKVVFCTTENDVAHIARALHAGANEYIMKPFDRDIVEAKF
                     QEVGLI"
BASE COUNT          572 a         1064 c         1058 g          537 t
ORIGIN      
        1 gatcgaagac gatagcgcca ccgcgcaatc gatcgagttg atgctcaaat ccgagagctt
       61 caacgtctac acgaccgacc tcggcgagga agggatcgat ctcggcaaga tctacgacta
      121 cgacatcatc ctcctcgatc tcaaccttcc ggacatgtca ggcttcgagg tgctgcgcag
      181 cctgcgcgtc tccaaggtga agacgccgat cctgatcctc tccggcctcg tcggcatcga
      241 ggacaaagtc agggggctcg gtttcggcgc cgacgactat atgaccaagc cgttccacaa
      301 ggacgagctg gtcgcgcgca tccacgcgat tgtgcggcgc tccaagggcc acgctcaatc
      361 cgtcatccag accggcgatc tcgtcgtcaa cctcgacacc aagacggtcg aggtcaacgg
      421 tgcgcgcgtg catctgaccg gtaaggaata tcagatgctg gagctgcttt cgctgcgcaa
      481 gggcacgacc ctgaccaagg agatgttcct caaccatctc tatggcggca tggacgagcc
      541 ggaactcaag atcatcgacg tcttcatctg caagctgcgc aagaagctcg ccaacgcgtc
      601 gaacggcaag aactacatcg agaccgtttg gggccgcggc tacgtgctgc gcgagccgat
      661 cgaggccgag gccaggatcc cggcgtgacc gccggcgccg catcttcagc gccaagtttt
      721 caagaccccg gccaggcggc cggggttttt gcttacccgc aagcgctcct cgcaaccccg
      781 gcttgacgcg gccgctccgt gccacgcgca cgctgagggt ttcgagcgca ttcgcgccga
      841 gggcatcagc gtctctgccc ggccgatccg gcggcgactt cgtcgtgact cagcgcccgc
      901 cgcttgcggc gacgaggcgc gggccgggtt tgccggcggc ggcccatcgc agcggcaggc
      961 gcggattggg cgcatagagg ccgcgcttgt caggaacggt cgtgaagctg tcggtcagcc
     1021 ccaccactgt ctcggccgcg ccgagcacga gatagccgtc ggccgcggtg acctgcgcaa
     1081 gccggtcgag gagatcgacc ttcgtctgct ggtcgaaata gatgaggacg ttgcggcaga
     1141 agatcagatc gaacatgccc aggtgggaga agtccgacat cagattgacc tgccggtatt
     1201 tgaccatgcc gcgaatgttc ggcgtgagct gccacatatc gttcgactgc gtgaaatact
     1261 tgatcaggag gtggatcggc agcccccgtt gcacctcgaa ctggctgtag atccccgccc
     1321 gcgccttccc caggacttcg ttggagaggt cggtcgccaa gatatcgatg cgccagtcgg
     1381 cgatgtcgcg ctccatctcc ttgaggcaga tggcgagcga atacggctcc tggccggtcg
     1441 cggcggctgc gcaccagatg cggatggtgc gcgaggtacg gcgcgccgct ttgagcgccg
     1501 gcaggatggt cgagcggaaa tgctcgaatg gcactttgtc ccgaaagaac agcgattcgt
     1561 tggtcatcat cgcctcgacc accgccgtca tcagcgcttc ggcgttgccg cgtttgagca
     1621 cggccaccag ttcgctgagg gtgccgaggc cggccttgcg cgccaccggc agcagtcggc
     1681 tctcggccag gtactgcttg tcggcggaca gcacgagccc cgagcgttcc ttgagggact
     1741 tgcgcaagaa gtcgtagtcg agcggcgtca ctggcggtct ccaaaaaaca agcgcgtcac
     1801 gttcgcggca atctgatcga gcggcagtac ggccgaacac agtccggctt gcgcaaccga
     1861 gcgcggcatg ccccacacca cgctcgtcgc ctcgtcctga gcgatcacgc tgccgcccgc
     1921 cgcgacaaga tccgcggcgc cgcgggtacc gtcggtgccc atgccggtga gcacgagcgc
     1981 gaggttgccg gcgccccatg ctgccgccgc cgatgagaac agagcgtcca ccgccggctt
     2041 gcagaaattg atgggagggt cgtcgtcgag cgcgatccgc acaccgccgg ggccgcgcac
     2101 gacgcgcatg tgacggccgc cgggcgccac gtagatgccg ccggcgagga ccggttcgcc
     2161 gtcctcgccc tcgtgcgcgt cgcggccggc ggcgcccttg aggtgctcgg ccaagaccgc
     2221 ggtaaaggtc ggcggcatgt gctgcgcgat caacaccggt gcgcggtcga tcgcggcggt
     2281 caatgttgca agcagcgccg aaagcgcctg cggaccgccg gtcgaggagc cgatcaaaag
     2341 cgcgcgcggc gcggcgagcg agaacggccg caggttgacg gtgctggtgc cggccgcaag
     2401 tggcagtccg ccgcccggcc gcagcgcgcg gcgcagcgat ggatccgccg ccggtaccgc
     2461 ggccggcgca agggcacgta acgccgagtg gccgcggccg agggtacgga ctttctcgat
     2521 caattcacgc cggaacgcaa ccgacgtggc cgcgtctggc gcggcttccg gcttgggaac
     2581 atagtcggcg gcgccaagcg acagcgcccg cagactgacc tcggcgctcc ggcgggtcag
     2641 cgtcgacacc atgatcacta cgaggccgcg cttcttcttg agcagcagcg gcagcgccga
     2701 aatcccatcg agctccggca tatcaacgtc gagcatgacg acgtcggcgt cgtgatgttc
     2761 gatggcatcc accgcctgac gcccggtgcg cagcgcggcg acaaccttca tgtcgggttc
     2821 ggcatcgatc caaccgcgca acaggctgcg ggcaacgacc gcgtcatcga cgaccatgac
     2881 gcggatgggc cggtcggcag aggccgcagg gcttgcggcg gcaacggcaa tactcatggc
     2941 actgtgactt ttttgactgt tacttttgca ctctgacttc cgcagtcgaa cttctcgcct
     3001 caagcttccg cgttcgcggg acgcttcacg ttcgaatccg gccgccgaga gcccggcagg
     3061 cgcccgagct actgcgctca gatgagcccg acttcctgga atttggcttc gacaatgtcc
     3121 ctgtcgaagg gtttcatgat gtattcattg gcgccggcgt gcagcgcccg ggcaatgtgg
     3181 gcgacgtcgt tctcggtggt gcagaacacc accttcggct tgtcgccgcc g
//
LOCUS       DATMQB010000271         3963 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1035786, whole genome shotgun sequence.
ACCESSION   DATMQB010000271 DATMQB010000000
VERSION     DATMQB010000271.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3963)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3963)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3963
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1035786"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..519
                     /locus_tag="VNY79_08050"
     CDS             <1..519
                     /locus_tag="VNY79_08050"
                     /inference="COORDINATES: protein motif:HMM:NF024808.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HWX72436.1"
                     /translation="HFRAFWENFGQSVNLMVNGEVALESMWSPAVAAIQAEGVPCVYA
                     FPKEGMRGWHGGLAISAKVKGKQLDQAYEYINWWLAGWPAAFVARQGYYHSIPENAKK
                     FLAAEEWDYWYDGKPAGKDLADPFGTIIIKKGDVRTGGSYWSRYSKIAVWNSLMDEND
                     YLVKRWTEFLTA"
     gene            600..1604
                     /locus_tag="VNY79_08055"
     CDS             600..1604
                     /locus_tag="VNY79_08055"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX72437.1"
                     /translation="MTTVETYSRLTQAETAPRGLIGGAPAAHPEAEAQRKYRREPGFP
                     VPILVAPATLWLVVFLFLPLVSIFIFTFWKSSGHGMTPAFTLDNYRAFFVTEGFFDPS
                     HADFLTPSVFIRTLWTTFRFTITVMAICLILAYPMAYFLSMQVEDFKWQLALFLLVMV
                     PFWTSYLIRAVAWLPMLGRHGLINEFLMSLGAIDEPVSFFLYSEFSYTMALVQLYVVL
                     AVGPIFFSLAKIDRTLLEAARDMGATPFQIFREIIAPLSLPGVAIGMIFIFVMLMGEF
                     ATAVVVYGGKTSTTGTVILNYYAIANYPFAAVNAFMLMVAMMIGVVVILRVVDIRKEL
                     "
     gene            1607..2434
                     /locus_tag="VNY79_08060"
     CDS             1607..2434
                     /locus_tag="VNY79_08060"
                     /EC_number="7.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007196023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX72438.1"
                     /translation="MARSTPEQRRKARVKAGFGVYYAIFLIFVYGPMFAMFTLSFQGP
                     RGGVTFPIRGLSFYWWAKLTGPSAVGDLKSSLVRSLILAVAVMIITAIFSTMLAMAFR
                     KRFRGSGALFYAVMAGLMVPGVLLSLGLASLLRQLGIPPNWWYSGLGVHVVWTLPFGF
                     LVMMAVFNRFDARLEEAARDMGADEWTVFKEVTLPLITPGIVAAGLFGFTLSYDEFAR
                     TTLLSGAQNTLPLDINASLTQRVQPTLFALGTASTIFSLLMIGLFIVIYTILYRRSR"
     gene            complement(2394..2894)
                     /locus_tag="VNY79_08065"
     CDS             complement(2394..2894)
                     /locus_tag="VNY79_08065"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72439.1"
                     /translation="MAGWRLFWALVGYVAFIVILIFLYFYKPFEDFFTLVINGLGYDN
                     AMFWVMLIAGIVGFCAYHWRAYRLYIVQRRSVDGMVLASLRGSAFIAILFCAGATAQS
                     MLILCVYLLQGGYTLGAEFGARLGAVVAMAILTVIFCLIYWLLKVVRQSSASSASADT
                     GSYKLQ"
     gene            complement(3014..>3963)
                     /locus_tag="VNY79_08070"
     CDS             complement(3014..>3963)
                     /locus_tag="VNY79_08070"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72440.1"
                     /translation="VAGAPAQSPRWYEFTLALLLLAAIAAFAIWLISSGRQWAWGETF
                     EDWRSDTRAIIFAAVMVALGVIGLIVSFAYTLAQSTRTAVAPRPVGSAVEKAPTTAPA
                     AAATPAAPRILGLIGLAVAIVLLCWIGLAPADQYGLIAQLIYPASLGVALVLVFDKAT
                     RAWGEKSAAEATREWLLCDLLMFLLLLAFLNLRSLAKPEAYASSFWDILNLVLFFAAF
                     WVIDRTASRSRFLIGYGYLVILPLLLLIWTTMQGVAAPASWWGTMWPFLILAVVFFVL
                     EVVTLVSSTGERQVLPALKDAVFVVLYVVLLIVAMRSSP"
BASE COUNT          705 a         1277 c         1262 g          719 t
ORIGIN      
        1 cacttccgcg ccttctggga aaacttcggc cagtcggtca acctcatggt caacggcgaa
       61 gtggcgctcg agagcatgtg gtcgccggcc gtcgccgcga tccaggccga gggcgtcccg
      121 tgcgtctacg cgttcccgaa ggagggcatg cgcggttggc acggcggtct cgccatctcc
      181 gcgaaggtca agggcaagca gctcgaccag gcctacgagt acatcaactg gtggctcgcc
      241 ggttggccgg ccgcgttcgt cgcgcgccag ggctactatc attcgatccc tgagaacgcg
      301 aagaaattcc tcgcggccga ggaatgggac tactggtacg acggcaagcc tgcgggcaag
      361 gacctggctg acccgttcgg cactatcatc atcaagaagg gcgacgtccg caccggcggc
      421 tcttattgga gccgctactc caagatcgcg gtgtggaatt cgttgatgga cgagaacgac
      481 tacctggtga agcggtggac ggagttcctc accgcctgag cctggtggcc gctttaggaa
      541 ctgtcttgtg agcgacgccg ccggcttcaa ccggcggcgt tttcgtgtat ggttgacccg
      601 tgacgacggt cgagacctac tccagattga cgcaggccga aacggcgccg cgtgggctga
      661 tcggcggcgc gccggcggcg catcccgaag cggaggcgca gcgcaaatac cgccgcgagc
      721 ccggcttccc ggtgccgata ttggtcgcgc cggccacgct gtggctcgtg gtcttcctgt
      781 tcctgccgct ggtttcgatc ttcatcttca cgttctggaa atcgagcggg cacggcatga
      841 cgccggcctt cacgctggac aactaccgcg ccttcttcgt gacggaaggc tttttcgatc
      901 caagtcacgc cgatttcctg accccgtccg ttttcatccg cacgctgtgg acgacgtttc
      961 gcttcaccat aacggtgatg gcgatctgct tgatcctcgc ttatcccatg gcctatttcc
     1021 tctccatgca ggtagaggat ttcaaatggc agcttgcgtt gtttcttttg gtcatggtcc
     1081 cgttctggac cagctatctc atccgcgcgg tcgcctggct gccgatgctc ggccgccatg
     1141 ggctgatcaa cgaattcctg atgtcgctcg gcgcaatcga cgaaccggtc agcttcttcc
     1201 tctattccga gttcagctac acgatggcgc tggtgcagct ctacgtggtg ctggcggtcg
     1261 ggccgatctt cttctccctc gccaagatcg atcgcacgct gcttgaggcg gcgcgcgaca
     1321 tgggcgcgac gccgttccag atcttccgcg agatcatcgc gccgctgtcg ctgccgggcg
     1381 tcgccatcgg catgatcttc atcttcgtca tgctgatggg cgagttcgcc accgccgtgg
     1441 tcgtctacgg cggcaagacc tcgaccacgg gcaccgtgat cctcaactac tacgccatcg
     1501 ccaactatcc gtttgccgcg gtcaacgcct tcatgctgat ggtggcgatg atgatcgggg
     1561 tcgtggtcat cttgcgggta gtggacatcc gcaaggagct ctagcgatgg cgcgctcgac
     1621 tccggaacag cgccgcaagg cccgcgtcaa ggcgggcttc ggcgtctact acgcgatctt
     1681 cctgatcttc gtgtacgggc cgatgttcgc aatgttcacg ctgtcctttc agggaccgcg
     1741 cggcggcgtg actttcccga tacgcggcct gagcttctac tggtgggcga agctgaccgg
     1801 tccgtcggcg gtcggcgatc tcaagagttc gctggtgcgt tcgctcattc ttgccgtcgc
     1861 agtgatgatc atcaccgcga ttttctcgac catgctggcc atggcctttc gcaagcgctt
     1921 ccgcgggtcg ggcgcgctgt tctacgcggt gatggccgga ttgatggtcc ccggcgtcct
     1981 gctcagcctc gggctcgctt cgctgctgcg tcagctcggc atcccgccga actggtggta
     2041 ttcgggcctc ggcgtccacg tcgtgtggac gctgccgttc ggcttcctgg tgatgatggc
     2101 ggtgttcaac cgcttcgacg cccgcctcga ggaggcggcg cgcgacatgg gcgccgacga
     2161 gtggacggta ttcaaggaag tgaccctgcc gctgatcacg cccggcatcg tggcggcggg
     2221 cctgttcggc ttcactctct cctacgacga gttcgcccgc acgacgctgt tgtccggcgc
     2281 gcagaacacg ttgccgctcg acatcaacgc gtcgctgacg cagcgcgtgc agccgacgct
     2341 gttcgcgctc ggcaccgcct cgaccatatt ctcgctgctg atgatcggcc tgtttattgt
     2401 aatttatacg atcctgtatc ggcgctcgcg ctagaagcgg agctctgccg caccactttg
     2461 agcagccagt agatcaggca gaagatcacg gtgaggatcg ccatggcgac gacggcgccc
     2521 agccgcgcgc cgaactcggc gccgagcgtg taaccgccct gcagcagata gacgcaaagg
     2581 atcagcatcg attgcgccgt ggcgccggcg cagaacagga tcgcaatgaa ggcggacccg
     2641 cgcagcgagg cgagcaccat cccgtcgacg ctgcgccgct gcacgatgta gagccggtag
     2701 gcgcgccaat gataggcgca gaagccgacg atgcccgcga tcagcatcac ccagaacatc
     2761 gcgttgtcgt agccgagccc gttgatgacc agcgtgaaga agtcttcgaa cggcttgtag
     2821 aaataaagaa agatgagaat gacgatgaag gccacatagc ccaccagcgc ccaaaacagc
     2881 cgccatcccg ccatttcgac tgagcccccg attgctttgc ggataccccg ggccgcgtgt
     2941 gcggcgccag ttggagcacg tcacgttgcc aacggcaagg gggcggcggc acggcgcccg
     3001 cgcaccggcg ccttcaggga ctggacctca tggcgacgat gagcaggact acgtagagca
     3061 ccacgaagac ggcgtccttc aacgccggca ggacctgccg ttcgcccgtt gacgagacca
     3121 gcgtgaccac ttcgagaacg aagaatacga ccgcgaggat gagaaacggc cacatcgtgc
     3181 cccaccacga agccggcgcg gcgacgccct gcatggtcgt ccagatcaag agcagcaaag
     3241 gaaggatgac gaggtatccg tagccgatga gaaagcggct gcgcgaggcg gtgcggtcga
     3301 tgacccagaa cgcggcaaag aacaggacca ggttgaggat gtcccagaaa ctcgaggcat
     3361 aggcctcggg cttggccagg ctccgcaggt tgagaaacgc gagcagcagc agaaacatca
     3421 gcaggtcgca cagcagccat tcgcgcgtcg cctcggccgc gctcttctcg ccccaggcgc
     3481 gcgtcgcctt gtcgaagacg agcaccagcg ccacgccgag gcttgcggga tagatcagct
     3541 gcgcgatcag cccgtactgg tcggccggcg cgagcccgat ccagcacagc agcacgatcg
     3601 cgaccgcgag gccgatgagg ccgagaatcc gcggggccgc cggcgtcgcg gcggccgccg
     3661 gcgcggtcgt gggcgccttc tccacggctg acccgaccgg ccgcggcgcc acagcggtcc
     3721 gtgtcgactg cgccagcgtg taggcgaagg agacgatgag cccgatgacg ccgagagcga
     3781 ccatcacggc ggcgaagatg atcgcacgcg tatccgagcg ccaatcttcg aacgtctcgc
     3841 cccacgccca ttgccggccg ctggaaatca gccagatggc gaacgccgcg atcgcggcaa
     3901 ggagcagcaa ggccagcgtg aattcgtacc accgcggcga ttgcgccggc gcgccggcaa
     3961 cgg
//
LOCUS       DATMQB010000272         2485 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3510124, whole genome shotgun sequence.
ACCESSION   DATMQB010000272 DATMQB010000000
VERSION     DATMQB010000272.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2485)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2485)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2485
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3510124"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(289..1647)
                     /locus_tag="VNY79_08075"
     CDS             complement(289..1647)
                     /locus_tag="VNY79_08075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate aminotransferase family protein"
                     /protein_id="HWX72441.1"
                     /translation="MESSLQRKSANPRATSVPNDLSAFWLPFTPNRAFKRAPRFITRA
                     KDMHYFTPDGRAVLDGLAGLWCTNAGHNRDPIVAAIKQEAEQLDYAPAFQFAHPKSFE
                     LASRVAALAPADLNRVFFCNSGSEAVDTALKIALAYHNVRGEGARTRLIGRERGYHGV
                     GFGGISVGGIVNNRKFFGTLLAGIDHLPATYSREHQAFTKGEPEWGAHLADELERLVV
                     LHDASTIAAVIVEPMAGSTGVLPPPKGYLQRLRAICDKHGILLIFDEVITGFGRLGHA
                     FAAERYGVTPDLLCFAKGVTSGAVPMGGVIARESLYEAFMQGPEHVIELFHGYTYSAH
                     PLACAAGIAALDLYRDEGLFERAKKLEPVVAEAAMMLKGVPNVLDVRAVGVAVGIDIA
                     SRPGAVGKRGYEAMERAFHEESLMIRVSGDTLAIAPPLIVTEAQIAEIFEKTARVIRA
                     LA"
     gene            1892..>2485
                     /locus_tag="VNY79_08080"
     CDS             1892..>2485
                     /locus_tag="VNY79_08080"
                     /inference="COORDINATES: protein motif:HMM:NF015437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LuxR family transcriptional regulator"
                     /protein_id="HWX72442.1"
                     /translation="MIDVTRRALTRFGFDFFCFNTFPNRGQRFEDVTIAIHVPPEWLR
                     IYNEREYVRIDPSIRHCRQMVRPFRWSDAPYDPEREPEVLPFLKGSADFALTNGFWFP
                     IPGRHGTVGGVWMGGPKAAVVERDLPLLHLIALSAFELLRRPPGVPIPLTPREREVLS
                     WAAQGKSAWETGEILGIAKRTVDEHVQTASRKLNAVNR"
BASE COUNT          445 a          797 c          824 g          419 t
ORIGIN      
        1 gcgagcgagc cggcgatcag cgccatgcac aggacgatga agatcgcgcc aatgcgcacc
       61 atgaacaacc cctgatcaca ccccgccgga gcatgcccga agcgccaagg cgctggcaag
      121 gaacgggcgg tcgctatgcc ccgcaaaaac gattcgcatc ggggccatta ccagtggcca
      181 caagggccgc gaccccgcaa gccggcgcga ttcgctggtt cccgttggtt cccgtccgct
      241 ctcgtcgccg caaggccggc ggcgaacgga gtgtgcttca ggaggaacct atgccagcgc
      301 cctgatcacc cgcgccgtct tctcgaagat ctccgcaatc tgcgcctcgg tgacgatcaa
      361 cggcggggcg atggcgagcg tgtcgccgga gacgcggatc atgaggcttt cttcatggaa
      421 ggcgcgttcc atcgcctcgt agccgcgctt gccgacggcg ccgggccggg aggcaatgtc
      481 gatgccgacg gcgacgccga cggcgcgcac gtcgagcacg ttcggcactc ccttgagcat
      541 catcgccgcc tcggcaacga ccggctcgag cttcttggcc cgctcgaaca gaccctcgtc
      601 gcgataaagg tcgagcgccg caatcccggc ggcgcaggca agcggatgcg ccgaataggt
      661 atagccgtgg aacagctcga tcacgtgctc cggcccctgc atgaaagcct cgtagaggct
      721 ctcgcgcgcg atcacgccgc ccatcggcac ggcgccggag gtcaccccct tggcaaagca
      781 gaggaggtca ggcgtcaccc catagcgttc cgcggcaaag gcgtggccga gacggccgaa
      841 gccggtgatc acctcgtcga agatcaaaag gatgccgtgc ttgtcgcaga tcgcacgcag
      901 gcgctgaagg tagcccttgg gcggcggcag cacgccggtc gagccggcca tcggctcgac
      961 gatcaccgcg gcgatagtcg aggcgtcgtg cagcacgact aggcgctcga gctcgtcggc
     1021 gaggtgggcg ccccattccg gctcgccttt ggtgaaggcc tgatgctcac ggctatacgt
     1081 cgccggcaga tgatcgatcc cggctaggag cgtgccgaag aatttgcggt tgttgacgat
     1141 gccgccgacg gaaatgccgc cgaagccgac gccgtgatag ccgcgctcac ggccgatcag
     1201 gcgcgtgcgc gcgccctcgc cgcgcacatt gtggtaggcg agcgcgatct tgagcgcggt
     1261 atcgaccgcc tccgagcctg aattgcagaa gaacacgcga ttgaggtcgg ctggcgccaa
     1321 cgccgcgacc cggctcgcga gttcgaagga cttggggtgg gcgaactgga aggccggggc
     1381 atagtcgagt tgttcggcct cctgcttgat ggcggcgaca atagggtcgc ggttgtggcc
     1441 ggcattagtg caccagagcc cggcaagacc gtcgagcacg gcgcgcccgt cgggcgtgaa
     1501 atagtgcatg tccttggcgc gcgtgatgaa acgcggcgcg cgcttgaagg cgcggttcgg
     1561 cgtaaatggc agccagaatg cgctgagatc gttcggtacg ctggtcgcac gaggatttgc
     1621 ggatttccgc tgaagcgagc tttccacggg attctcccgg cgttcattgt cgatcgatag
     1681 aggctaacgc attccggcgc ttcacggaac gggtttggca tcggcacccg gtgagccttt
     1741 ctcttgacgc aagcccgaca gggggttgca atggcgctac tgcgcaggtt caatctacga
     1801 accggggcga tgcgcatgtc tgaggccgac agcggcttcg tacgggaagc gcgtcctcga
     1861 agatcttgat cgtcagacta cggtcgacgg cgtgatcgat gtcacccggc gcgcgctcac
     1921 gcgctttggc ttcgactttt tttgcttcaa cacatttccg aaccgagggc agcgattcga
     1981 ggacgtgacc attgcgatcc acgtgccccc ggagtggctc cgcatctaca acgaacggga
     2041 atacgttcgc atcgatccga gcatccgcca ctgccggcag atggtgcgcc cattcaggtg
     2101 gagcgacgcc ccttatgatc ccgagcgcga gccggaagtc cttcccttcc ttaagggctc
     2161 ggccgacttt gcgctgacca atgggttctg gtttcccatt cccgggcgac acggcacggt
     2221 cggtggggtc tggatgggcg gccccaaagc ggcagttgtc gaacgcgacc tgccgctcct
     2281 ccacctcatt gcactctccg cgttcgagtt gctgcgccgg ccgccgggcg tgccgatccc
     2341 gttaacgccg cgcgagcggg aagtgctctc gtgggcagcg cagggcaagt cggcctggga
     2401 gaccggcgag attctcggca tcgccaaacg caccgtcgat gagcacgtgc agaccgcgag
     2461 ccgaaagctc aatgccgtca accgg
//
LOCUS       DATMQB010000273         2517 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4123823, whole genome shotgun sequence.
ACCESSION   DATMQB010000273 DATMQB010000000
VERSION     DATMQB010000273.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2517)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2517)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2517
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4123823"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..483
                     /gene="mobB"
                     /locus_tag="VNY79_08085"
     CDS             <1..483
                     /gene="mobB"
                     /locus_tag="VNY79_08085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HWX72443.1"
                     /translation="TLITRVVPLLNRRGIRVATVKHAHHAFEIDRPGKDSWLHREAGA
                     TEVAIVSSRRWAIVHELREESEPALTEILAKLSPADLVIVEGFKRHALPKLEIFRAAL
                     GKPLLQPHDDCIVAVAADAPLPQSQVPVLMLDDIESIADVLQAEAVPRERVGAAPAPT
                     "
     gene            complement(523..1149)
                     /gene="mobA"
                     /locus_tag="VNY79_08090"
     CDS             complement(523..1149)
                     /gene="mobA"
                     /locus_tag="VNY79_08090"
                     /EC_number="2.7.7.77"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0061603 - molybdenum cofactor
                     guanylyltransferase activity [Evidence IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase MobA"
                     /protein_id="HWX72444.1"
                     /translation="MAIPPTLGVVLAGGRARRMGLADKTRIPIGGSTILDRVIARLGP
                     QCRQLILNANGDLARFADTRLAVVADSVPGYAGPLAGILAGLDWAAGRAPDVAWMVSV
                     PGDGPFLPRDLVARLHGARSEDNAALACARSGHRRHPVVGLWPISLREDLRRALTHEG
                     IRKVDEWSSRYERGIAEWPSDPVDPFFNVNTPAEAAEAERLAARYPDI"
     gene            complement(1172..2221)
                     /locus_tag="VNY79_08095"
     CDS             complement(1172..2221)
                     /locus_tag="VNY79_08095"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX72445.1"
                     /translation="MTNEPRTLSIDRRTLLGGFAAALIAPRHGFAATATDATGRTITA
                     PDRVSRVYPAGPPAAVLLYTLAPDLLIGWLEPLGAAEREFLLPEVAARPQVPRLTGRG
                     GAVNLEAVNSLKPDLIVDAGTVNASFKALAETTQQQTGIPYALYDGRFEQIVPTYRAL
                     GELVGRTEAAEKLARYAEGTMTTVKERSAAVPSGTQPRVYYARDKSGLQTGLGASMIA
                     EAIEFIGAHNVAAELHGAHGTVTLEQVRTWNPDTIITSDREFAANVRSDAGWAEIAAV
                     KAGRIFASPRQPFGWVDFPPAVNRLIGLWWLGKIFYPERFPEDIKALARDFYSLFYHV
                     TPTAAQIERVLAGGD"
     gene            2427..2516
                     /locus_tag="VNY79_08100"
     tRNA            2427..2516
                     /locus_tag="VNY79_08100"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:2461..2463,aa:Ser,seq:gga)
BASE COUNT          403 a          818 c          881 g          415 t
ORIGIN      
        1 acgctgatca cccgggtcgt tccgctgctc aaccggcgcg gcatcagggt cgcgaccgtc
       61 aagcatgcgc accatgcgtt cgagatcgac cggccaggca aggattcatg gctgcaccgc
      121 gaagccggcg cgaccgaggt cgcgatcgtt tccagccgcc gctgggccat cgttcacgag
      181 ttgcgcgagg agagcgagcc ggcgctcact gaaatactgg cgaagctgag cccggccgat
      241 ctggtgatcg tcgaggggtt caagcggcac gcgctgccga agctcgaaat ttttcgcgcc
      301 gcgcttggca agcctttgct gcagccgcac gacgattgca tcgtcgccgt cgccgccgac
      361 gccccgctgc cgcaatcgca ggtgccggtg ctgatgctcg acgatatcga gagcatcgcc
      421 gacgtgctgc aggcggaggc ggtgccacgc gagcgcgtcg gcgcggcgcc ggcaccgacg
      481 tgacggcggt caagacccga tccgttcatt tccgcttcga gctcaaatgt cgggatatcg
      541 tgccgcgaga cgctcggctt cggcggcttc ggccggcgtg ttgacgttga agaacggatc
      601 gaccggatcg ctcggccact cggcgatgcc gcgttcgtag cggctgctcc attcgtcgac
      661 cttgcgtatg ccctcgtgcg tcagcgcgcg ccgcagatcc tcgcggaggc tgatcggcca
      721 taagccgacc actgggtgcc gccggtgccc tgaacgcgcg caggcgagcg ccgcattgtc
      781 ctcgcttcgc gccccatgca gtcgcgctac aagatcgcgc ggcaggaacg ggccgtcgcc
      841 gggcacgctt accatccagg cgacgtctgg cgcgcgccca gccgcccaat cgaggccggc
      901 gagaatgccg gcgagcgggc ccgcataacc tggcacgctg tcggcgacga ccgcgagcct
      961 ggtgtcggcg aagcgcgcaa gatcgccgtt ggcattgagg atcagctgcc ggcactgcgg
     1021 accgagccgg gcgatgacgc ggtcgagaat ggtcgagccg ccgatgggga tgcgggtctt
     1081 gtcggccaag cccatgcggc gtgcgcgtcc gccggcgagc acgacgccga gggttggagg
     1141 aatagccacg gcggcgtgct tgccggagca atcaatcgcc gccggcgagc acgcgctcga
     1201 tctgcgccgc ggtcggcgtc acatgataga ataaactgta gaaatcgcgg gccagcgcct
     1261 tgatgtcctc gggaaagcgc tcgggataga aaatcttgcc gagccaccac agcccgatca
     1321 ggcggttgac ggccggcgga aaatcgaccc agccgaacgg ctgccgcggc gaggcaaaga
     1381 tccgcccggc cttgaccgcg gcgatctcgg cccagccggc gtcgctgcgc acatttgcgg
     1441 caaactcgcg atcgctggtg ataatagtgt cgggattcca ggtgcgcacc tgctcgagcg
     1501 tcaccgtgcc gtgggcgccg tgcagttccg cggcaacgtt gtgcgcgccg atgaactcga
     1561 tggcttcggc aatcatcgaa gcgccgaggc cggtctgcag gccgctcttg tcgcgggcgt
     1621 agtagacgcg cggctgcgtg ccgctcggca cggcagcgct gcgctccttg acggtcgtca
     1681 tcgtgccttc ggcatagcgc gcgagttttt ccgccgcctc ggtgcggcca acgagctcgc
     1741 ccagcgcgcg gtaggtcggc acgatctgct cgaagcggcc gtcgtacagc gcgtagggaa
     1801 tgccggtctg ttgctgcgtg gtttcggcaa gcgccttgaa gcttgcgttc accgtgccgg
     1861 cgtcgacgat cagatcgggc ttgagcgaat tgacggcctc gaggttgaca gcgccgccgc
     1921 ggccggtgag ccgcggcact tgcggccggg ccgcgacttc cgggagcagg aactcgcgtt
     1981 ccgcggcacc gagcggctcg agccaaccga tcaggagatc gggcgcgagc gtatagagca
     2041 gcaccgccgc cggcggaccg gcaggataga cacgcgacac gcggtcgggc gcggtgatgg
     2101 tccggccggt cgcgtcggtg gccgtcgccg caaagccatg ccgcggcgcg atgagcgcgg
     2161 cggcaaagcc gccgagaagc gttctgcggt cgatggaaag ggtcctgggc tcgttggtca
     2221 ttgcttgact ggacggttct tcgtcatttc cagcgtcagg tggcgaaatt gacgccagat
     2281 aacggtgttg cccacgatca cggtgtcggc catcggtgtc aggctcgatc atggtgtcgg
     2341 ccaccgcctt tgtccagccg cgagcgccgt gcacgtcgcc ggttgtctgg cgaacccgcc
     2401 tcgctatatt gcgcgtttcc cctgcaggag ggatggccga gtggctgaag gcgcacgctt
     2461 ggaaagcgtg tatacgggaa accgtatcgt gggttcgaat cccactccct ccgccag
//
LOCUS       DATMQB010000274         3518 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4434412, whole genome shotgun sequence.
ACCESSION   DATMQB010000274 DATMQB010000000
VERSION     DATMQB010000274.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3518)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3518)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3518
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4434412"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..382)
                     /locus_tag="VNY79_08105"
     CDS             complement(<1..382)
                     /locus_tag="VNY79_08105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012555529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX72446.1"
                     /translation="MNLLPFVASGIGLGAVYALSSVGLVILYRASGTLNFAFGAFGGV
                     SAFLAWQLTQDGVPAPVGWIAGIAVSTAIAYAYGRFFAPRLSHRDRVVRAVATLGLAL
                     ILLGAMALYWGVGVARRLVLPTDLN"
     gene            683..1624
                     /locus_tag="VNY79_08110"
     CDS             683..1624
                     /locus_tag="VNY79_08110"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72447.1"
                     /translation="MTAGLAERRAVRTVLPVPEPDLTPAELIARAAALKLLLRQQQAE
                     NDERGFYSQELHQAFLDAGLYRTLQPRMFGGYEFDVPTFYRAMLEISHGHPSAGWCLT
                     LCASHPFLIASHWSERAQRELFGPDGDFAAPHRVPPAGMLTPAEGGYRLTGLWDFCSG
                     IPHSTHLVCGARLPVTDGPPEVFCVAVPREKLRILDDWGGDRTLGMRASGSHSVEIKD
                     AFIPAHHAVPLQGLFTRPEDMRDGTPGTQLHGNPMYLGRVAGPYHMSLITPVIGAAKA
                     SLDEYQDIIRTKNTTFRRSSRAPSTRIFSARSARPPF"
     gene            1621..1953
                     /locus_tag="VNY79_08115"
     CDS             1621..1953
                     /locus_tag="VNY79_08115"
                     /inference="COORDINATES: protein motif:HMM:NF019640.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72448.1"
                     /translation="MTDAAENLMIRGGEVYMEMCERWASDGTLMTVEQNLRLWAMLQQ
                     AGRMACDAVELLFKNAGTSVARKGSRMERYLRDAQMYRVHPSSLFEKFWAPVGRARLG
                     LPIRHFNF"
     gene            complement(2196..3473)
                     /locus_tag="VNY79_08120"
     CDS             complement(2196..3473)
                     /locus_tag="VNY79_08120"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX72449.1"
                     /translation="MKSAVRLLAVFAIAILAGFVSQAQAAPDCGENTGKKATGKPIPI
                     GAVTTMSGIGSFKEADDAVRAYFDCVNANGGIHGRPITYHDEDDQSQLDVAAQAAKKL
                     VGDEGVYAMIGSTSIIECIPNANYYLKENIVEIGEGIPPQCYQSKNIAEVNAGPRASG
                     IAGADYARRVLGAKSVACTIPKFPGSDWSCGGLEEWGKKFGVKVTSIYSDPASPDINS
                     LVLQLLATGADAVMTYGTDDIGARIVEAAQQQDGAAKMKWLAPTSFYTVRFPGAIDTK
                     YWNDRYWVNAELAPLASKGKDNQNWIAVMDAYGGKALRDSFSQAGYIAARIAVRAMLT
                     IKNPDDINRNTVTAAIQNMPPYETDILCMPWYWGGPDVTEHNPNHVTRMAMIHDGKWK
                     TIEGCVADPDPALGRIEALEQKLGIKISDTAHE"
BASE COUNT          585 a         1152 c         1155 g          626 t
ORIGIN      
        1 agttcagatc ggtcggcagc acgagccgcc gcgccacgcc gacgccccag tacaaggcca
       61 tggcgccgag caggatgagg gcgagcccaa gcgtggcgac ggcgcgaacg acccggtcac
      121 gatgcgacag gcgcggcgca aagaagcgtc cgtaggcgta ggcgatcgcc gtcgagacgg
      181 cgatgccggc gatccagccg acaggggcgg ggacaccgtc ctgcgtcaac tgccacgcca
      241 ggaatgcgga tacgcccccg aaggcgccga aggcgaaatt caacgtgccc gacgcccggt
      301 agaggatcac caggccgacg ctggagaggg catagacggc accgaggccg atccccgagg
      361 cgacgaaagg cagaagattc atttgaatcc agccaccgtc atgggaaggc cacccggccg
      421 cgcggccgga cgctggtgtc ctccctctgc gggcaatcct atagccgccg tttcacggtg
      481 tcagcagttt tggtctgcgc gcgctgcgca agacgggcaa tcgggtcgcg agcaggaagc
      541 gggcgccgcc aaagggagaa cgcgccgccg cctggaagca gagtccaccg gtccattcgc
      601 atgtccccgt gccgctgttc cggctgcggc aatgccgtta tgctgcgtga ggcgagcaaa
      661 gccggcgcat agggaaacgc aaatgacggc aggtctcgct gaacggcgag cggtgcgcac
      721 ggttctgccg gtgcctgaac ccgatctcac gccggcggaa ttgatcgcgc gcgcggcagc
      781 gctcaagctg ctgctgcgcc agcagcaggc ggaaaacgac gaacgcggct tctattcgca
      841 ggaactgcac caggcgttcc tcgacgccgg cctttaccgc acgctgcagc cgcggatgtt
      901 cggcggctac gagttcgacg tcccgacctt ctaccgggcc atgctggaga tttcgcatgg
      961 ccatccatcg gccggctggt gcctcacgct ctgtgcgtcg catccctttc tcatcgcctc
     1021 gcattggtcc gagcgggcgc agcgcgaatt gttcgggccg gacggggact tcgcggcgcc
     1081 gcaccgcgtg cccccggccg gcatgctcac gccggccgaa ggcggctacc ggctcaccgg
     1141 cctgtgggat ttctgctccg gcatccctca ctccacgcac ctcgtctgcg gggcgcggct
     1201 gccggtcacc gacgggccgc cggaggtgtt ttgcgtcgcg gtgccgcgcg agaagctgcg
     1261 cattctcgac gattggggcg gcgaccgaac gctcggcatg cgcgccagcg gctcgcacag
     1321 cgtcgagatc aaggacgcct tcatcccggc gcaccatgcg gtgccgctgc agggcctgtt
     1381 cacccgcccc gaagacatgc gcgacggcac gccgggaacg cagctgcacg gcaatccgat
     1441 gtacctcgga cgcgtcgccg gtccctacca catgtcgctg atcacgccgg tcatcggcgc
     1501 cgccaaggcg tcgctcgacg aataccagga catcatccgc accaagaaca caactttccg
     1561 ccgatcgtcc cgcgcgccga gcacgaggat tttcagcgcg cgctcggcca ggccaccatt
     1621 ctgaccgacg ccgccgagaa tctgatgatc cgcggcggcg aggtgtacat ggaaatgtgc
     1681 gagcgctggg cgagcgacgg cacgctgatg actgtcgaac agaacctgcg gttatgggcg
     1741 atgctgcagc aggccggccg catggcctgc gacgcggtcg agctgttgtt caagaacgcc
     1801 ggcacctcgg tggcgcgcaa aggcagccgc atggagcggt acctgcgcga tgcgcaaatg
     1861 tatcgcgtgc atccctcgtc tttgttcgag aagttctggg cgccggtcgg ccgcgcgcgt
     1921 ctcggattgc cgatccggca cttcaacttc tagcgcacat tgcgttcgag ttgactcact
     1981 ctccgctcat tcccgcgcaa gcgggaatcc agatagagag cgcgaagatc gcgatcaatc
     2041 aactgggtcc ccgctttcgc ggggacgggc ggcgagagta accgtgtcaa tctcggcgaa
     2101 aatttgccgc agagcagagc gcgcgcaact tggtgtagcg aaagctgagg atttccgcgc
     2161 tggtgtcagc gacggaaatc ctcgattgaa gcggctcact cgtgcgccgt gtcggagatc
     2221 ttgattccga gcttctgctc cagcgcctcg atgcggccga gagccggatc aggatcggcc
     2281 acgcagcctt cgatcgtctt ccacttgccg tcgtggatca tcgccatgcg cgtcacgtgg
     2341 ttggggttgt gctcggtcac gtccggaccg ccccaatacc agggcatgca caggatgtcg
     2401 gtctcgtagg gcggcatgtt ctggatcgcc gccgtgaccg tgttgcggtt gatgtcgtcc
     2461 gggttcttga tcgtcagcat ggcgcgcacc gcgatccgcg cggcgatgta gccggcctgg
     2521 gagaagctgt cgcgcagcgc cttgccgccg taggcgtcca tcaccgcgat ccagttctga
     2581 ttgtccttgc ccttgctggc gagcggggcg agttccgcgt tcacccagta gcgatcgttc
     2641 cagtatttgg tgtcgatcgc gccagggaaa cgcaccgtgt agaacgaggt cggcgccagc
     2701 cacttcatct tggcggcgcc gtcctgctgc tgggcggcct ccacgatgcg cgcgccaata
     2761 tcgtcggtgc cgtaggtcat gaccgcgtcg gcgcccgtgg ccagcaactg cagcaccagc
     2821 gaattgatgt cgggcgaggc cggatcggag tagatgctcg tcaccttgac gccgaatttc
     2881 ttgccccatt cctcgagccc gccgcagctc cagtcggagc cggggaattt cggtatcgtg
     2941 caggcgacgc tttttgcccc gagcacgcgc cgggcgtagt cggcgccggc gatgccgctc
     3001 gcgcgcggac cggcgttgac ctcggcgatg ttcttcgatt gatagcattg cggcggaatg
     3061 ccttcgccga tctcgacgat gttttccttg aggtagtagt tggcgttggg aatgcactcg
     3121 atgatgctcg tgctgccgat catcgcgtag acgccttcgt cgccgacgag ttttttcgcg
     3181 gcctgcgccg ccacgtcgag ttggctctgg tcgtcctcgt catggtaggt gatcggccgg
     3241 ccgtgaatgc cgccattggc gttgacgcag tcgaagtagg cgcgcacggc gtcgtcggct
     3301 tccttgaagc tgccgatgcc gctcatcgtg gtcacggcgc cgatcggaat gggcttgccg
     3361 gtcgccttct tgccggtgtt ttcgccgcaa tccggcgccg cctgcgcctg cgagacaaac
     3421 cctgccagga tggcgatcgc gaaaaccgcc agcaaacgaa ccgcagattt catgacgtcc
     3481 tccctctgat cgccgcgtcc cactcggcgc gacttttt
//
LOCUS       DATMQB010000275         2381 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3200958, whole genome shotgun sequence.
ACCESSION   DATMQB010000275 DATMQB010000000
VERSION     DATMQB010000275.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2381)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2381)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2381
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3200958"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            73..579
                     /locus_tag="VNY79_08125"
     CDS             73..579
                     /locus_tag="VNY79_08125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019170859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl-tRNA synthetase associated
                     domain-containing protein"
                     /protein_id="HWX72450.1"
                     /translation="MPASPDDLFAYLDSLGIAHQTVTHPAVFTVEEARAARGKASGGH
                     TKNLFLRDKKGTAFLVVAQEDTAIELKSLHRRLGASGRFSFGAAELMRELLGVEPGSV
                     TPFAVINDQDRRVTVILDAALTAHDLLHFHPLVNTGTTTISRDGLIAFLEATGHKPRI
                     VPLAGGPD"
     gene            699..1604
                     /gene="trxA"
                     /locus_tag="VNY79_08130"
     CDS             699..1604
                     /gene="trxA"
                     /locus_tag="VNY79_08130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HWX72451.1"
                     /translation="MLQQAPTAAAAADSFVKDTTTQAFVRDVIEESKHQPVLVDFWAP
                     WCGPCRQLTPVLEKVVRAAKGKVKLVKMNIDDHPAIPGQMGIQSIPAVIAFVNGQPAD
                     GFMGALPESQVVAFLERITKGAVGDEAKDLIMAADAALAEGDAAGAAALYAQLLAEDN
                     SNVQALAGLARSYVKTGALDQARQTLAMVPASKANDAAVVAARAALDLAEQAKTVGPL
                     AELEQRVAADPLDHQARFDLALALNAKSRRGEALQHLIHIVKRDRKWNDDGARKQLVQ
                     FFDAWGPTDEATIEGRKRLSSILFA"
     gene            1662..2339
                     /locus_tag="VNY79_08135"
     CDS             1662..2339
                     /locus_tag="VNY79_08135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LON peptidase substrate-binding
                     domain-containing protein"
                     /protein_id="HWX72452.1"
                     /translation="MPINAIYKGPDDLPGVIAIFPLPGALLLPRGQMPLNIFEPRYLA
                     MVDDALRSGSRLIGMIQPDPVHAGPDRNKPHLFRVGCVGRITQFAESGDGRYLIQLTG
                     IARFRVEEELAVGSPYRQCRVTYQPFVDDFTARKGEEEVDRKALLRALADFLKANNLK
                     ADWEGIENAPNEALVNALAMMSPYGAPEKQAMLEAADLKTRAEILVAVTEIELAKSKT
                     PGETLLQ"
BASE COUNT          428 a          811 c          786 g          356 t
ORIGIN      
        1 gcaagaaaag cgccgtgcgt ttaggagggc ggagcttggc aagccgggcc agcgggacct
       61 atgaagcccc cgatgcctgc ctcaccggac gaccttttcg cctatctgga cagtctcggc
      121 atcgcgcacc agaccgtcac ccatccggcg gtcttcacgg tcgaggaagc gcgcgccgcg
      181 cgcgggaagg ccagcggcgg acacaccaag aacctgttcc tgcgcgacaa gaagggcacg
      241 gcattcctcg tggtggcgca ggaggacacg gcgatcgagc tcaaatcgct gcaccggcgc
      301 ctcggcgcgt cggggcggtt ctccttcggc gcggcggaac tcatgcgcga actcctcggc
      361 gtcgagcccg gttcggtcac cccgttcgcc gtcatcaacg accaggaccg ccgggtgacg
      421 gttattctcg atgcggcgct gaccgcgcac gacctgctcc attttcaccc gctggtgaac
      481 accgggacga ccacgatctc gcgcgacggg ctgatcgcgt ttctcgaagc gaccgggcac
      541 aagccgcgaa tcgtgccgct cgccggcggg ccagactgaa accgcgattg cattccgccg
      601 gcttcttccc atctaatcag gcggatagcc tatccattga aggcgatcag ggcagattgc
      661 ggccggctcc cggccgaaag gtaaggcgca gcaaagagat gttgcagcag gctccgaccg
      721 cggccgcagc cgcagacagt ttcgtcaagg acacgacgac ccaggccttc gtgcgggacg
      781 tgatcgagga atcgaagcac cagccggtgc tggtcgattt ctgggcgccc tggtgcggcc
      841 cgtgccggca gctcaccccg gtgctcgaga aggtggtgcg cgccgccaag ggcaaggtga
      901 agctcgtcaa gatgaacatc gacgaccatc cggcgatccc cggccagatg ggcatccaat
      961 cgatccccgc cgtgatcgcc ttcgtcaacg gccagccggc cgacggtttc atgggagcgc
     1021 tgccggagag ccaggtggtc gccttcctgg agcgcatcac caagggcgcc gtcggcgacg
     1081 aagccaagga tttgatcatg gccgcggacg cggcgctggc cgagggcgat gccgccggag
     1141 cggcggcgct ctatgcgcag ctcctcgccg aggacaacag caacgtccag gcgctggcgg
     1201 gcctcgcgcg ctcctacgtc aagaccggtg cgctcgacca ggcgcggcag actctcgcca
     1261 tggtgccggc ctccaaggcc aacgacgcgg cggtcgttgc cgcgcgcgcg gcgctggacc
     1321 tggccgagca ggcaaagacg gtcggcccgc ttgcggagct ggaacagagg gtcgccgccg
     1381 atccgctcga tcatcaggcg cgcttcgatc tcgcgctcgc gctcaatgcc aagagccgcc
     1441 gcggcgaggc gctgcagcat ctgatccaca tcgtcaagcg cgaccgcaaa tggaacgacg
     1501 acggcgcccg caagcagctc gtccagttct tcgatgcgtg gggtccgacc gacgaagcca
     1561 cgatcgaggg ccgcaagcgg ctgtcctcga tcctgttcgc gtagccgcct gtcccttccg
     1621 caacggaggt ggaacgcgtt cggtcgcgtg cggagtgcga catgccgatc aatgcgatct
     1681 acaaggggcc tgacgacctc cccggggtga tcgcgatatt cccgctgccg ggagcgctgc
     1741 tgctgccgcg cgggcagatg ccgctcaaca ttttcgagcc gcgctatctg gcgatggtcg
     1801 acgacgcgct gcgctccggg tcgcgcctga tcggcatgat ccagcccgat cccgtccatg
     1861 ccggaccgga caggaataag ccgcatctgt tccgcgtcgg ctgcgtcggg cggattaccc
     1921 agttcgccga gagcggcgac ggccgctatc tcatccagct caccggcatc gcccgtttcc
     1981 gcgtcgagga agagctcgcc gtcggctcgc cctaccggca gtgccgcgtc acctatcagc
     2041 ccttcgtcga cgacttcacg gcccgcaagg gcgaggaaga ggtcgaccgc aaggcgctgc
     2101 tgcgcgccct cgccgacttc ctcaaggcca acaacctcaa ggccgactgg gaagggatcg
     2161 agaacgcccc caacgaggcg ctggtgaacg cgctggcgat gatgtcgcct tacggcgctc
     2221 cggaaaagca ggccatgctg gaggcggccg acctgaagac ccgcgccgag attctggtcg
     2281 ccgtcaccga gatcgaactc gccaagagca agacgccggg cgagacgttg ctgcaatagc
     2341 gcacgacgga gaacgaaagt cggatgacgg acctatctgc c
//
LOCUS       DATMQB010000276         2207 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1041015, whole genome shotgun sequence.
ACCESSION   DATMQB010000276 DATMQB010000000
VERSION     DATMQB010000276.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2207)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2207)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2207
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1041015"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..1029)
                     /locus_tag="VNY79_08140"
     CDS             complement(34..1029)
                     /locus_tag="VNY79_08140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX72453.1"
                     /translation="MKGPLLIAAVVAAFAAVPLFVHSNVVFNFLVVTLLIALAGQGWN
                     IIGGYGGQYSFGHAAFFGTGAYVTAILQMRYGVNAWIGFVGGIAAGAAVGAIIGGLAF
                     RAGLRSSYFALVTLAFAEVLRILASVAPITGAGVGILIKLDLRPQSFQFQSRAVFYLV
                     ILALVAASLAIAQTLERSRFGAWLIAVRENEDAAMALGVDATAVKLGAMVISAAVTAA
                     AGCFYAQYFLFVDAGIAYGPWISIEALLTPIIGGAGTVFGPLVGALAVKALGEGAKLW
                     TGDVPGLDLVIYGALLVIVVAFAPAGLVGTLANVRERAARRLRAPRKGRAEAARG"
     gene            complement(1026..1898)
                     /locus_tag="VNY79_08145"
     CDS             complement(1026..1898)
                     /locus_tag="VNY79_08145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008964096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX72454.1"
                     /translation="MLSPLILGIAVLNGLLTGAVYALVALGLTLIYGVLHIINFAHGA
                     LLSAALFAAFFAHQKLGLDPYAAALLLAPAFFAVGYALQRFIIGPAARGDERNMLLVT
                     LGLAVLIENALLYAFRADTRTVDLPYSFKTLDLGFVFLAVPRLISFAAVFAVALALWA
                     IMALTDTGKAIRAVAREKLGAELAGIDVAHVYAMTFGLGTACVAIAACLLVPTYYVNP
                     GAGNAFVLIAFTVVVLGGMGSVPGALIGGLIIGVVESLGGFLLGESLGQVSIFLIFIV
                     VLLLRPRGLFGASA"
     gene            complement(1926..>2207)
                     /locus_tag="VNY79_08150"
     CDS             complement(1926..>2207)
                     /locus_tag="VNY79_08150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX72455.1"
                     /translation="GQFFTYEVYMNYNAILLVADAIERAASADRAKIVAALEASTFAG
                     HVMTYGPTKFVNGQNQGAAPVNTQVLDNDIKVVLPTEFADAKPVFPMPA"
BASE COUNT          451 a          718 c          757 g          281 t
ORIGIN      
        1 cggcgcgaca cgcgctcgac cgagagcagc ggctcagcca cgggccgcct ccgctcttcc
       61 ctttcgcggc gcccgcaggc ggcgcgcggc gcgttcacgg acgttcgcga gcgtgccgac
      121 gagaccggcc ggcgcgaacg cgacgacgat caccagcagc gcgccgtaga tcacgagatc
      181 gagcccggga acgtcaccgg tccagagctt ggcgccttcg ccgagcgcct tgaccgcgag
      241 cgccccgaca agcggcccga acacggtgcc ggcgccgccg atgatcggcg tcaagagcgc
      301 ctcgatcgag atccacgggc cataggcaat gccggcatcg acgaacagga aatactgcgc
      361 atagaagcag ccggcggccg ccgtgaccgc ggccgagatg accatggcgc cgagcttgac
      421 cgcggtcgcg tcgacgccga gcgccatggc cgcgtcttcg ttctcgcgca cggcgatcag
      481 ccaggcgccg aagcgtgagc gctcaagcgt ttgcgcgatc gcgagcgaag ccgccacgag
      541 cgccaggatg accagataga agacggcgcg gctctggaac tggaacgact gcgggcgcag
      601 gtcgagtttg atcagaatgc cgacgccggc cccggtgatt ggcgcgacgc tggcgaggat
      661 gcgcagcacc tcggcgaaag cgagcgtgac cagggcgaag taggaactgc gcagcccggc
      721 gcggaaggcc agcccgccga tgatcgcgcc gaccgccgcg ccggcggcaa tgccgccaac
      781 gaacccgatc caggcgttca cgccgtagcg catctgcagg atggcggtga cataggcgcc
      841 ggtgccgaag aacgcggcgt gaccgaacga atattggccg ccataaccgc cgatgatgtt
      901 ccacccctgc cccgccagcg cgatcagcag tgtcaccacg agaaagttga aaacaacgtt
      961 cgaatggaca aacagcggca ccgccgcgaa cgcggcaacg actgcggcga tgagcagcgg
     1021 ccccttcacg cgcttgctcc gaacaggccg cgcggccgca gcagcagaac gacgatgaag
     1081 atcaggaaaa tgctgacttg cccgagcgac tcgccgagca agaagccgcc aaggctttcg
     1141 accacgccga tgataagccc gccgatcagc gcccctggga ccgagcccat gccgccgagg
     1201 acgactaccg tgaaggcgat gagcacgaac gcattcccgg cgcccggatt gacgtagtag
     1261 gtcggcacca gcaggcaggc ggcaatggcg acgcacgcgg tgccgagacc gaaggtcatc
     1321 gcgtagacgt gcgccacatc gatgccggcg agttcggcgc cgagcttctc cctggcaaca
     1381 gcgcggatcg ccttgccggt gtcggtcagc gccatgatcg cccagagtgc cagcgctacg
     1441 gcgaagaccg ccgcgaacga gatcaggcgc ggaaccgcaa ggaagacgaa accgagatcg
     1501 agcgttttga aactgtaggg aaggtccacg gtccgcgtat cggcgcgaaa ggcgtagagg
     1561 agcgcgttct cgatcagcac tgccagcccc agcgtcacca gcagcatgtt gcgctcgtcg
     1621 ccacgcgccg ccgggccgat gatgaagcgt tgcaacgcgt aaccgaccgc gaagaatgcc
     1681 ggcgccagca gcaaggccgc ggcataggga tcgagtccca gtttttgatg agcgaagaac
     1741 gccgcgaaca aggcagcgct caacagtgcg ccgtgcgcga aattgatgat gtggaggacg
     1801 ccgtagatca gcgtcaaccc cagtgcgacg agcgcataga ccgcaccggt caggagccca
     1861 ttgaggaccg cgatgccgag gatgagaggc gaaagcacgg cggcggcgcc ggcggcacga
     1921 ggcggctacg ccggcattgg aaagaccggc ttcgcgtcgg cgaattcggt cggcaacacg
     1981 accttgatgt cgttgtcgag cacctgcgta ttgaccggcg ccgctccctg gttctgcccg
     2041 ttgacgaatt tggtcgggcc gtaggtcatc acgtggccgg cgaaggtcga ggcctcgagc
     2101 gcggcgacga tcttggcgcg gtcggcggag gcggcgcgct cgatggcgtc ggcgacgagc
     2161 aggatcgcgt tgtagttcat gtacacctcg taggtgaaga actggcc
//
LOCUS       DATMQB010000277         3419 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1043152, whole genome shotgun sequence.
ACCESSION   DATMQB010000277 DATMQB010000000
VERSION     DATMQB010000277.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3419)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3419)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3419
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1043152"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..313)
                     /locus_tag="VNY79_08155"
     CDS             complement(<1..313)
                     /locus_tag="VNY79_08155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2244 domain-containing protein"
                     /protein_id="HWX72456.1"
                     /translation="MSGDNAAVPEPTIFSATITPHRSLGSTGFLVLMLGIGGVSFVAG
                     VMFLLIGAWPVFSFLGLDVLLIYWAFRINYRAARAYEEVTVTTSELTVRKVSHRGSVR
                     EW"
     gene            335..1162
                     /gene="nth"
                     /locus_tag="VNY79_08160"
     CDS             335..1162
                     /gene="nth"
                     /locus_tag="VNY79_08160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HWX72457.1"
                     /translation="MARRTTGQGLKAARAGRAAQLKSGKAQAKADTNAAHGELPQWST
                     AEIAEAFRRFAAANPAPRGELEHIDPFTLLVAVVLSAQATDSGVNKATPALFKLADTP
                     EKMIKLGEARVRGLIKTIGLYRTKAKNLIALSRQLVAEHGGEVPHNRAALEALPGVGR
                     KTANVVLNVAFGEPTIAVDTHIFRIGNRTGLAVGKTPLDVEMKLMEVVPERYRLHAHH
                     WLILHGRYVCVARRPLCEKCLIADLCKWPGKTVSVPSPAAVAANPPAMTRGAGVPNG"
     gene            complement(1212..1883)
                     /locus_tag="VNY79_08165"
     CDS             complement(1212..1883)
                     /locus_tag="VNY79_08165"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HWX72458.1"
                     /translation="MQFRRWSGTDAGCFATYGLKPSFIGGGTAGYNWEFGKLVTGIEG
                     EYGYLHLKGNGQLPFIGGTPCGSAANPCDVFFSTQAGNWFATITGRLGVTADTLNLQW
                     LGGAHTLFYGKLGAAVSRVAVSEFSPGSAVTTAVPFSFSGAKNVWGLAAGGGVEWAFN
                     QSWSLKAEYEYLGLRKTVAACGSLPPSAAGAGGPWCTQGGIGGVQSLKAGINYRFNSW
                     PMAAQ"
     gene            complement(2444..2860)
                     /locus_tag="VNY79_08170"
     CDS             complement(2444..2860)
                     /locus_tag="VNY79_08170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011504535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YciI family protein"
                     /protein_id="HWX72459.1"
                     /translation="MRFMMIMIPEVYGKPMAPDFMPDMGAVKKMGEYNEALQQAGVLL
                     ALDGLMPPSAGARVSFAGGKAKVTDGPFPGSKEAVGGFWMIRVKSRDEAIEWAKRCPA
                     GANDVIEIRQVHEPKDFGPEVAHQERELAEKLGSNG"
     gene            complement(3006..>3419)
                     /locus_tag="VNY79_08175"
     CDS             complement(3006..>3419)
                     /locus_tag="VNY79_08175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72460.1"
                     /translation="CVASGPAHHDKDAAAIAAAYTDDAIICDLAPPLYHRGVDVKEKQ
                     AWLSWEGPIDLEPRDFSLTISGDIAYTQGYLRMSGTPKAAGRPVSFWLRDTICVNRVN
                     GGVEDRPSALVGAVLHGRQPAAGVRSAAVKTASMR"
BASE COUNT          632 a         1169 c         1047 g          571 t
ORIGIN      
        1 tccattcccg cacgctcccg cgatggctga ccttgcgcac ggtgagttcc gaggtcgtga
       61 ccgtcacctc ctcataggcg cgcgccgcac gatagttgat ccggaacgcc cagtagatca
      121 gcagcacgtc gaggccgagg aaactgaaga ccggccaggc gccgatcagc agaaacatca
      181 ccccggcgac gaagctcacg ccgccgatgc ccagcatgag tacgaggaag ccggttgagc
      241 cgagcgagcg atgcggcgtg atggtcgccg aaaagatggt gggttcggga actgctgcgt
      301 tgtcgccgct catgcctctc actatacggg aaacatggcg cgcaggacca ccggacaagg
      361 gctcaaggcc gcccgcgcgg gcagggcggc gcagctcaaa agcggcaagg cgcaggccaa
      421 ggccgacacg aatgccgccc acggcgaact gccgcaatgg tcaacggcag aaatcgctga
      481 agcgttccgc cgcttcgccg ccgccaatcc ggcgccgcgc ggcgagcttg agcacatcga
      541 cccgttcacc ttgctggtcg cggtcgtgct ttccgcgcag gcgaccgact ccggcgtcaa
      601 caaggcgacg ccggccctgt tcaagctcgc cgacacgccg gagaagatga tcaagctcgg
      661 cgaagcgcgg gtgcgcgggc tcatcaagac catcggcctt tatcgcacca aggcgaagaa
      721 cctgatcgcg ctgtcccgcc agctcgtcgc cgagcacggc ggcgaggtcc cgcacaaccg
      781 cgccgcgctc gaagcgctgc ccggcgtcgg ccgcaagacc gccaacgtcg tgctcaacgt
      841 cgccttcggc gagccgacca tcgccgtcga tacccacatc ttccgcatcg gcaaccgcac
      901 cgggctcgcc gtcggtaaga cgccgctcga cgtcgagatg aagctgatgg aagtcgtgcc
      961 cgagcgctac cgcctgcacg cccatcactg gctcatcttg cacggccggt atgtctgtgt
     1021 cgcgcgccgg ccgctctgcg aaaaatgcct gatcgccgat ctgtgcaaat ggccggggaa
     1081 gacagtgagt gttccctcac ccgcggcagt cgccgcaaac ccgcccgcaa tgacgcgagg
     1141 ggctggcgtg cccaatggct gacttgccgt gaatctgatt gtcgaacgaa ttgcggccag
     1201 cgcttgatga cttattgcgc agccatcggc cacgaattga agcgatagtt gatcccggcc
     1261 tttaagctct ggacgccacc gatgccgccc tgggtgcacc acgggccgcc ggcgccggcg
     1321 gccgagggtg gcagcgagcc gcacgccgct accgtttttc tcagtcccag gtattcatac
     1381 tcggccttca gactccaact ctgattgaac gcccattcga caccgccgcc cgcggcgaga
     1441 ccccagacat tcttcgcccc ggaaaatgaa aacggcaccg cagttgttac ggcgctcccg
     1501 ggactgaact ccgacacggc taccctgctc accgccgcgc cgagtttccc atagaacaac
     1561 gtgtgggcgc cccccagcca ctgtaggttc aaagtgtcgg cggtcacgcc cagacggccg
     1621 gtaatggtgg caaaccaatt cccagcctgt gtagaaaaga acacatcgca cggattggcc
     1681 gcgctcccac agggagtacc gccgataaag ggcaactgac cgttcccttt gaggtgcaaa
     1741 tatccatact cgccctcgat cccggtcacg agttttccaa actcccaatt gtacccggcg
     1801 gtaccgccgc caatgaagct cggcttcagg ccataggtcg cgaaacagcc ggcgtcagtc
     1861 ccggaccagc gccgaaattg caccccgtga cgggcgtgcc aggcggaaat ggtccgacag
     1921 tcccaggatt ggtcgcgtcc gggttggaca cggaacgggt tcctgcgcca cctgcgaagc
     1981 cgccgagata gaagcccgtc cagctgaagg cggggggagg ggccgccgcc ggcgctttca
     2041 gcagcatatc ggctgcgaga gcgggcgctc cgacaaatgc gctcacagca acgattgcgg
     2101 cgaacaactt cttcatacga gcgccctcag cgtcggaacc caacaaccta ccatagcctc
     2161 ggtcaatcag ctcgcctgtg gccgccttgc tacagtgaag aagaatgtgg tgcgcaaatc
     2221 gcttagcgat gcagcgcacc aattccgcca ggacctgcgg ccgctgagct ccggcgagcg
     2281 cggccgatca agcgctcgat atcggcgatg tcgctgatcg gatcggggat ggtctcaaag
     2341 gcgggcggcg gcagcgccgc ccgcgcacac ggcacttgcc tccgcgagtg ttgtcggccg
     2401 gtacgccgct gcgctcacgc cgacagcttg ctcgacggcg gcgctacccg ttgctgccaa
     2461 gcttttccgc cagctcgcgc tcctggtgcg cgacttccgg tccgaaatct ttcggctcgt
     2521 ggacctggcg gatctcgatc acgtcgttgg cgcccgccgg gcagcgcttg gcccactcga
     2581 tcgcctcgtc gcgcgatttc acccggatca tccaaaagcc gccgaccgct tccttgctcc
     2641 ccggaaacgg cccgtccgtc accttcgcct tgccgccggc aaacgagacg cgcgcgccgg
     2701 cggacggcgg catcaggccg tcgagcgcca gcagcacgcc ggcctgctgt agcgcctcat
     2761 tgtactcccc cattttcttg acggccccca tgtcaggcat gaagtccggc gccatgggtt
     2821 tgccgtagac ttcgggaatc atgatcatca tgaagcgcat gtctctctcc ctgttagaaa
     2881 cgtccgcgca gctcggataa gcgaagcgat atccgggatt tttgcttgcg cgtagcgccg
     2941 cgcttacgcc ggctgcttgt gtgccggacc ctatcagggc ggcggcgatg gggatcggcg
     3001 cgcggttatc gcatcgatgc tgtcttcacg gctgcagatc gaacgccggc cgcaggctgc
     3061 cgtccatgta gaacggcacc gacgagtgca gatggacgat cttccacgcc cccgttcacg
     3121 cgattgacgc aaatcgtgtc gcgcagccag aagctcaccg gccggccggc ggccttcggc
     3181 gttcccgaca tgcgcaggta gccttgcgtg taggcgatgt cgccgctgat ggtcagcgag
     3241 aagtcgcgcg gctcgaggtc gatcggtcct tcccagctaa gccatgcctg cttctccttc
     3301 acatcgacgc cgcgatgata caacggcggc gccagatcgc agatgatcgc atcgtccgtg
     3361 taggcggcgg cgatcgctgc ggcatccttg tcgtgatggg ctgggcctga cgcaacgca
//
LOCUS       DATMQB010000278         4613 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2900814, whole genome shotgun sequence.
ACCESSION   DATMQB010000278 DATMQB010000000
VERSION     DATMQB010000278.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4613)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4613)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4613
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2900814"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            51..305
                     /locus_tag="VNY79_08180"
     CDS             51..305
                     /locus_tag="VNY79_08180"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72461.1"
                     /translation="MSRKIIPATVVAVLFASTGLASAQAPSAEGFGFGSGPYQSPAVQ
                     SVTPAPYAQFNGYYNMAPTDRYLYGSAPRRHAAPENGAVR"
     gene            576..3320
                     /gene="mutS"
                     /locus_tag="VNY79_08185"
     CDS             576..3320
                     /gene="mutS"
                     /locus_tag="VNY79_08185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0030983 - mismatched DNA binding [Evidence
                     IEA];
                     GO_process: GO:0006298 - mismatch repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HWX72462.1"
                     /translation="MLKSDSAERSEAPNAAGQPVTPMMEQYIEIKAANPDCLLFYRMG
                     DFYELFFEDAEVAARALGIVLTKRGKHLGRDIPMCGVPVERADEYLHRLIAFGHRVAV
                     CEQLEDPAEARKRGNKSVVRRDVVRLVTPGTLTEDSLLDARRNNYLLALARARASSTE
                     DRFALAWIDISTGEFRVAESDRAGLAAEIARIEPGEIIVSDALYADAELAPQLRALPV
                     VTPLARDVFDGATAERRLAAFFGVATTAAFGAFSRVELTAAAAAITYVERTQIGKHPP
                     LSPPVREAAGATLAIDHATRSNLELVRTLAGERRGSLLAAIDRTVTPGGSRALAQRLA
                     APLTDPGEIAHRLDAVGALVDDAGTRADLRQRLKSAPDLARALSRLVVGRGGPRDLAA
                     IRDGIVAASAIAERLAALAAGSRDIQRALKALSLPDTALAAELSRSLADELPAFRRDG
                     CFIRAGCEQALDDARALRDESRRIVAALQVRYAEATGIRSLKIRHNNVLGYFVDVTAQ
                     HGDKLLSAPLNATFIHRQTLAGQVRFTTTELGALEAKIANAADRALALELEIFDRLAA
                     AVTAASAAIMEAAEALAAVDVAAALASLAVERDYVRPEVDASLAFAITGGRHPVVEQA
                     LGKDGGPFIANDCDLSPPALAEGKEAAGRIWLVTGPNMAGKSTFLRQNALVAVLAQMG
                     SFVPAKAARIGVIDRLFSRVGAADDLARGRSTFMVEMVETAAILNQAGERALVILDEI
                     GRGTATFDGLSIAWATIEHLHENNRCRALFATHFHEMTALAAKLPRVRNATMRVKEWQ
                     GEVVFLHEVVAGAADRSYGIQVAKLAGLPPSVIERARHVLAQLEAEDRSSRARQLIDD
                     LPLFAARLASTPAPPRDATLTALIEALAALHPDEMSPRDALEALYALKAQLAKTRSLD
                     "
     gene            complement(3584..4093)
                     /locus_tag="VNY79_08190"
     CDS             complement(3584..4093)
                     /locus_tag="VNY79_08190"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004601 - peroxidase activity [Evidence
                     IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HWX72463.1"
                     /translation="MDAAGLRALQAPIKERYKTDPKAAVITLKAKGSLDDTSIACKVE
                     TGRALAVAGLHLATGGSGLELCSGDMLLEALVACAGVTLKAVATAIDVPLRAGTVSAE
                     GDLDFRGTLGVAKEAPVGFAQIRLRFDLDTDASQEKLDQLLKLTERYCVVYQTIRSGP
                     SVEIGLTRK"
     gene            complement(4208..>4613)
                     /locus_tag="VNY79_08195"
     CDS             complement(4208..>4613)
                     /locus_tag="VNY79_08195"
                     /inference="COORDINATES: protein motif:HMM:NF024989.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HWX72464.1"
                     /translation="AGAVAAIDGNAPDAAKQIIEATKGGAWAVIDLVGAARTVQLALD
                     SIVKGGKVIVVGLFGGDVTIPTPFLPLRAMSIQGSYVGSLTEMGELLDLVRRKGAPDL
                     PIGTRPLAAVNDALNELKDGKVVGRLVLMPAA"
BASE COUNT          719 a         1629 c         1539 g          726 t
ORIGIN      
        1 ccgatcgcgc ctatatgcgt gccgcaagca aagcagactt ggaggtcaca atgtctcgca
       61 agattatccc cgctacggtg gtggcggtcc tgttcgcgtc caccggcttg gcgtccgccc
      121 aggctccgtc cgccgagggc ttcggcttcg gctcaggccc gtaccagagc cctgccgtcc
      181 agagcgtcac tccagctccg tacgcgcagt tcaacgggta ctacaatatg gcgcccaccg
      241 accggtacct ttacgggtcg gcgccgcgga gacacgcggc gcccgaaaac ggggctgtgc
      301 ggtaactcga agcagaattt ttcgaagcaa cggccgcgtc atgcgcggcc gttgcctttt
      361 tcgtgagcgg ctcctcgcac cgcgcacggg aagtgcagaa gcccgaagcg tggcccggcg
      421 gcctgcacga tgtgcggcag cagcgttgtc cacggtgcaa aaccgcgttt tcggcacgca
      481 cttacccttc accggtgacc ctcgcgctct gatacaaaag ccagcaagga gactgttgaa
      541 cttgcaggat cctgtcggag ggaaccggct caacgatgct gaagagcgat tccgcagagc
      601 gcagcgaagc tccaaacgcg gcgggacagc cggtcacccc gatgatggag caatatatcg
      661 agatcaaggc ggccaatccg gattgtctcc tgttctaccg gatgggtgat ttctacgaat
      721 tgttcttcga ggacgccgaa gtcgccgcgc gcgcgcttgg catcgtgctc accaagcgcg
      781 gcaagcatct gggccgcgac attccgatgt gcggcgttcc ggtcgagcgc gccgacgaat
      841 acctgcaccg gctgatcgcg ttcggccatc gtgtcgccgt ctgtgagcag cttgaagatc
      901 ccgccgaggc gagaaaacgc ggcaacaaaa gcgtcgtccg ccgcgacgtg gtgcggctgg
      961 tcacccccgg cacgctgacc gaggattcgc tgctcgatgc ccggcgcaac aactacctgc
     1021 tcgcgctcgc gcgcgcccgc gcctcgtcga cggaagaccg cttcgcgctc gcctggatcg
     1081 acatctccac gggcgagttt cgcgtggcgg aaagcgaccg tgccggtctt gcggccgaga
     1141 tcgcccgcat cgagccgggc gaaatcatcg tctccgacgc gctttatgcc gacgccgagc
     1201 ttgcgccgca gctgcgcgcg ctgccggtgg taacgccgct cgcccgcgac gtgttcgacg
     1261 gcgcgactgc cgagcggcgg cttgccgcgt tcttcggcgt cgccacgacc gcagccttcg
     1321 gcgccttctc gcgcgtcgag ctgacggccg cggcggcggc gatcacctac gtcgagcgca
     1381 cccagatcgg caagcatccg ccgctgtcgc cgccggtgcg cgaggccgcc ggcgcgacgc
     1441 tcgcgatcga ccatgcgacg cgcagcaacc tcgagctcgt gcgtacgctc gccggcgaac
     1501 ggcgcggttc gctgctcgcc gcgatcgatc gtacggtgac gccgggcggt tcgcgggcgc
     1561 tggcgcagcg gctggcggcg ccgctgaccg atccgggcga gatcgcccac cggctcgacg
     1621 ccgtcggcgc attggtcgac gacgccggca cacgcgccga tctgcgccag cggctgaaat
     1681 ccgcgcccga tctggcgcgc gccctgtcgc gcctcgtggt cggccgcggc gggccgcgcg
     1741 atcttgccgc aatccgcgac ggcatcgttg ccgcatccgc catcgcggag cggcttgcgg
     1801 cgctcgccgc tggctcgcgc gacatccaac gggcgctcaa ggcgctgtcg ctgcccgaca
     1861 ctgcactcgc cgccgagctg tcgcggtcgc ttgccgatga gctgccggcg ttccgccgcg
     1921 acggctgctt catccgcgcc ggctgcgaac aggcgctcga cgatgcccgc gcgctgcgcg
     1981 acgaatcgcg gcgcatcgtc gccgccttgc aggtccgcta cgccgaggcg accggtatcc
     2041 gctcgctgaa aatccgccac aacaacgtgc tcggctattt cgtcgacgtg accgcgcagc
     2101 acggcgacaa gctgttgagc gcgccgctca acgcgacctt catccatcgc cagacgctcg
     2161 ccggccaggt gcgcttcacc accaccgagc tcggcgcgct cgaggcgaag atcgccaatg
     2221 ccgccgatcg cgcgctggcg ctcgagctgg agatcttcga tcgcctcgcc gccgccgtca
     2281 ccgccgcgag cgcggcgatc atggaggcgg cggaagcgct cgccgccgtc gacgtcgcgg
     2341 cggcgctcgc gagcctcgcg gtcgagcgcg actatgtgcg ccccgaggtc gatgcaagcc
     2401 tcgccttcgc catcaccggc gggcgccacc cggtcgtcga gcaggcgctc ggcaaggacg
     2461 gcgggccgtt catcgccaac gattgcgacc tgtcgccgcc agcgctggcg gagggcaaag
     2521 aggccgcggg gcgtatctgg ctcgtcaccg gtccgaacat ggcagggaaa tcgacttttt
     2581 tgcgccagaa cgcgctcgtc gccgtgctgg cgcagatggg aagtttcgta ccggccaaag
     2641 ccgcccgcat cggcgtcatc gaccgcctct tctcgcgggt cggcgcggct gatgatctcg
     2701 cgcgcgggcg ctcgaccttc atggtcgaga tggtcgagac tgcggcgatc ctcaaccagg
     2761 cgggcgaacg cgcgctcgtc atcctcgacg agatcggccg cggcacggcg accttcgacg
     2821 ggctctccat cgcctgggcc acgatcgagc acctgcacga gaacaaccgc tgccgcgcgc
     2881 tgttcgcgac gcatttccac gagatgaccg cgctcgcggc caagctgcca cgggtccgca
     2941 acgccacgat gcgcgtgaag gaatggcagg gcgaagtcgt gtttttgcac gaagtcgttg
     3001 ccggcgccgc cgaccgctcc tacggcatcc aggtggcgaa gctcgccggc ttgccgccca
     3061 gcgtgatcga gcgcgcgcgg cacgtgctgg cgcaactcga agccgaggat aggagttcgc
     3121 gggcgcggca gctgatcgac gatctgccgc tgttcgccgc acggctggcg tcaacgccgg
     3181 cgccgccgcg cgacgccaca ctcaccgcgc tgatcgaggc gctcgcggcg ctccatcccg
     3241 acgagatgtc gccgcgcgac gcgctcgagg cgctctatgc gctcaaggcg cagctggcga
     3301 agacgcgcag tctggattga gcggcgcgac gtccggggtc ggtccgcccg ccggcagccc
     3361 ggtcccgcgg tccgcgtcgc gcaatccacg ctaggcttgc tgcgtgcgcg cgatccacaa
     3421 cagcccgctc cacgcgatac agatcgcaag gcctttcgtc actccggccg agcgaagcga
     3481 gagcggcaac ccatcaccgc gaccgcggtg ccatacttct tgcgagcggt ggacagggat
     3541 tccgggttcg cgcccttcgg cgcgcccgga atgacgcaat cggtcacttg cgggtcagcc
     3601 ctatctccac cgacgggccg ctcctgatcg tctgatagac gacgcaatag cgctcggtga
     3661 gcttgagcag ctgatcgagc ttctcctgcg acgcgtcggt gtcgaggtcg aagcgcaggc
     3721 ggatctgcgc gaagccgacc ggcgcctcct tggcgacgcc gagcgtgccg cggaaatcga
     3781 ggtcgccttc ggccgagacc gtgccggcgc ggagcgggac gtcgatcgcg gtggcgactg
     3841 ccttgagtgt gacgccggca caggcaacga gcgcctcgag cagcatgtcg cctgagcaca
     3901 attcgagccc ggagccgccg gtcgccagat gcagccccgc aacggcgagc gcgcggccag
     3961 tctcgacctt gcacgcgatg ctggtgtcgt cgagcgagcc cttggccttg agcgtgatca
     4021 ccgcggcctt gggatcggtc ttgtagcgct ccttgatcgg cgcctgcagc gcgcgcagtc
     4081 cggcagcgtc catggacaga cctttcctgc gaattcgatg aaaaaatagg gacgacagac
     4141 ggcggacaac agagacggca acctgtcgct ctgacgcccg ctgtctgtcg tcagtcgtct
     4201 gtttcggtca tgccgccggc atcagcacga ggcggccgac gaccttgccg tccttcaatt
     4261 cgttgagcgc gtcgttgacc gcagcgagcg gacgcgtgcc gatcgggagg tcgggcgcgc
     4321 ccttgcggcg cacgaggtcg agcagctcgc ccatttcggt gaggctgccg acatatgagc
     4381 cctgaatgga catggcgcgc agcggcagga acggcgtcgg tatggtgacg tcgccgccga
     4441 acaggccgac gacgatgacc ttgccgccct taacgatgct gtcgagggca agctgcactg
     4501 tgcgcgcggc gccgacgaga tcgatcaccg cccacgctcc gcccttcgtc gcctcgatga
     4561 tctgcttggc cgcatccggc gcattgccgt cgatcgccgc caccgcgccg gcc
//
LOCUS       DATMQB010000279         2746 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2900916, whole genome shotgun sequence.
ACCESSION   DATMQB010000279 DATMQB010000000
VERSION     DATMQB010000279.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2746)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2746)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2746
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2900916"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2180
                     /locus_tag="VNY79_08200"
     CDS             <1..2180
                     /locus_tag="VNY79_08200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007605036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0016818 - hydrolase activity, acting on
                     acid anhydrides, in phosphorus-containing anhydrides
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="ligase-associated DNA damage response DEXH box
                     helicase"
                     /protein_id="HWX72465.1"
                     /translation="ETRTGDTPTSKRQRQRRDPPQILLTTPEQLALLLASADAPYLFG
                     SLKRVVLDELHALVMSKRGDLLSLGLARLFRLAPDLASTGLSATVAEPQELTRYMVPQ
                     GGGAPGSACADLIVAEGGAAPNVSMLDTHERLPWAGHSARHALAEIYRLIKAHRTTLV
                     FVNTRSQAEGIFQELWHLNDDNLAIALHHGSLDVAQRRKVEAAMAAGRLRAVVCTSSL
                     DLGVDWGDVDLVVNVGAPKGASRIVQRIGRANHRMDEPSKGVLVPANRFEVLECRAAL
                     DAIAENAQDTPPLRVGALDVLAQHVLGCACGEPFRSDELYAEVTQAAPYAGLARADFD
                     AVVDFVATGGYALKAYDRFARIRHGKDGFWRISNPHVATRYRLNVGTIVEADMLKVRL
                     VRSRASTLIPRGGRLLGQVEEYFVETMVPGDTFVFAGEILKYEALAEDEVYVSRSTSE
                     DPKVPAYEGGKFPLSTYLAARVRGIIAHPQEWRELPDQVRQWLEIQEWRSQMPGVREL
                     LVETFPRGNKHYLICYPFEGRLAHQTLGMLMTRRLERARLRPMGFVANEYALAVWGLG
                     DLASYVSRGELALGALFDEDMLGDDLEAWLAESALMKRTFRNCAIIAGLIERRFPGEE
                     KSRRQVTISTDLVYDVLRSHQPDHVLLRAARADAATGLLDVRRLADMLSRIKGRIVHK
                     ALDHVSPLAVPVMLEIGRETVYGEAADSLLAEAADELVKEAMQ"
     gene            2429..>2746
                     /locus_tag="VNY79_08205"
     CDS             2429..>2746
                     /locus_tag="VNY79_08205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HWX72466.1"
                     /translation="MADRAGAIYWPDEKLLIVADLHLEKGSAFAARGVLLPPYDTAAT
                     LAGVARLVERYAPRLVIALGDSFHDGGGPLRMTAPDRAALTALQRGRDWLWITGNHDP
                     HPVD"
BASE COUNT          426 a          962 c          903 g          455 t
ORIGIN      
        1 tcgaaacacg caccggcgac acgccgacct cgaagcgcca acgccaacgc cgcgatccgc
       61 cgcagatcct gctcaccacg cccgagcagc ttgcgctcct gctcgcttcc gccgacgcgc
      121 cctatctgtt cggctcgctc aagcgggtgg tgctcgacga gctgcacgcg ctggttatgt
      181 cgaagcgcgg cgatctcctt tcgctcggtc ttgcccggct ctttcgcctc gccccagatt
      241 tggccagcac cggcctctcg gcgacggtgg cggagccgca ggagctgacc cgttacatgg
      301 tgccgcaagg cggcggcgct ccaggcagtg cgtgcgccga tctcatcgtc gccgaaggcg
      361 gcgctgcgcc gaatgtgagc atgctcgaca cgcacgagcg gcttccctgg gccggccatt
      421 cggcgcgcca cgcgctcgcg gagatctacc gactgatcaa ggcgcaccgg accacgctcg
      481 tcttcgtcaa cacccgcagc caggccgagg gcatctttca ggagctctgg catctcaatg
      541 acgacaatct cgccatcgcg ctgcatcacg gctccctcga cgtggcgcag cggcgcaagg
      601 tcgaagcggc gatggcagcc ggccgcctgc gcgcggtggt atgcacgtca tcgctcgatc
      661 tcggtgtcga ctggggcgat gtcgatctcg tcgtcaatgt cggcgcgccg aagggcgctt
      721 cgcggatcgt gcagcgcatc ggccgcgcca atcaccgcat ggacgagccg tcgaagggcg
      781 tgctcgttcc ggcgaaccgc ttcgaggtgc tggaatgccg cgccgcgctc gacgccatcg
      841 ccgagaatgc tcaggacacg ccgcccctgc gcgtcggcgc actcgacgtg ctcgcccagc
      901 acgtgctcgg ttgcgcctgc ggcgagccgt tccggagcga cgagctttac gccgaggtga
      961 cccaggccgc gccctatgcc gggctggcac gcgcggattt cgacgctgtc gtcgacttcg
     1021 tcgcaaccgg cggctacgcg ctcaaggcct atgatcgctt tgcccgcatc cgccacggca
     1081 aggatgggtt ctggcgcatc agcaatcccc atgttgcgac ccgctaccgg ctcaacgtcg
     1141 gcaccatcgt cgaagccgac atgctcaagg tccgcctcgt gcgctcgcgc gcctcgacgt
     1201 tgatcccgcg cggcggccgg ctgctcggcc aggtcgagga atattttgtc gagacgatgg
     1261 tgccgggcga taccttcgtg ttcgccggcg agatcttgaa atacgaggcg ctggccgaag
     1321 acgaggtcta cgtctcgcga tcgacgtccg aggatccgaa ggtgcccgcc tacgagggcg
     1381 ggaaattccc gctctcgacc tatctcgcgg cgcgcgtgcg cggcatcatc gcgcatccgc
     1441 aggaatggcg ggagctgccg gaccaggtgc gccaatggct cgaaatccag gaatggcgct
     1501 cgcagatgcc gggcgtgcgc gagcttctgg tcgagacatt tccgcgcggc aacaagcatt
     1561 acctgatctg ctacccgttc gagggccgcc tcgcccacca gacgctcggc atgctgatga
     1621 cgcggcggct cgagcgggcg cggctgcggc cgatgggttt tgtcgccaac gagtacgcac
     1681 tcgccgtgtg gggtctcggc gaccttgcct cgtacgtttc gcgcggcgag ctcgcgctcg
     1741 gcgcgctctt cgatgaggac atgctcggcg atgatctcga agcgtggctc gccgagtcgg
     1801 ctttgatgaa gcgcaccttc cgcaactgcg cgatcatcgc cggcctgatc gagcgccgct
     1861 tccccggcga ggagaaatcg cggcggcagg tgacgatctc gaccgacctc gtctacgacg
     1921 tgctgcgcag ccaccagccc gaccacgtcc tgctgcgcgc cgcccgcgcc gacgccgcca
     1981 ccggcctcct cgacgtgcgc cgcctcgccg atatgctctc gcgcatcaag gggcgaatcg
     2041 tccataaggc gctcgatcac gtctcgccgc tcgccgttcc ggtcatgctc gagatcggcc
     2101 gcgagacggt ctacggcgag gcggcggatt cgctcctcgc cgaagcagcg gacgaactgg
     2161 tgaaggaggc gatgcagtga gggcaccggg ggctaaggtt gatggcggct ggcttgcgcg
     2221 gccaactccc tccccccttg ttggggaggg tcggggtggg gggtcgcgag gtgacgcgct
     2281 aacgtcacag ctcacccaag gcctctcgac ccccaccccc aacccctccc cacaagcttg
     2341 cgaccgggcg tgcgacaagc gcggcccggt tgggggaggg gagcaacaaa cggctcagac
     2401 caccctcacc gtttgcgaca cgactctcat cgccgatcga gccggagcaa tctattggcc
     2461 cgacgaaaag ctcctgatcg tcgccgatct gcatcttgaa aaaggctcgg cgtttgccgc
     2521 gcgcggggtg ctgctgccgc cctacgacac ggcggcgaca ttggcgggag tggcgcgcct
     2581 ggtcgaacgg tatgcgccac ggctcgtgat cgcactgggc gacagcttcc acgatggcgg
     2641 cgggccgttg cgcatgaccg cgcctgaccg cgcggcgctc accgcgctgc agcgcggccg
     2701 cgattggctg tggattaccg gcaatcatga tccccacccg gtggac
//
LOCUS       DATMQB010000280        12329 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3823111, whole genome shotgun sequence.
ACCESSION   DATMQB010000280 DATMQB010000000
VERSION     DATMQB010000280.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 12329)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12329)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12329
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3823111"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..975
                     /locus_tag="VNY79_08210"
     CDS             <1..975
                     /locus_tag="VNY79_08210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011652012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HWX72467.1"
                     /translation="TIAWFAFFTFLSGFTQNFEQLLIVRGLQGLGFGGEWAAGSVLIG
                     EVIRTENRGKAVGTVQSAWAWGWGAAAILATIMFQLLPQEIAWRALFFVGLLPALLIF
                     YIRANVPEPKIFREAATAATRRGTLDIFGPDLLATTIVGAVLATGAQGGYYAITTFLP
                     TFLRTQRHLTVMGTGGYLAVIIVGSWVGYIVSAYLNDAIGRRKNFFIFAIGSLVIAVA
                     YTQAEIPNSLMLVLGFPLGFFASGIFSGMGPVLTELFPTSVRGAGQGFCYNFGRGIGA
                     FFPTLVGTLSATVPLGTAIGIFAACAYAVVILAALMLPETRGRKLLAN"
     gene            1240..4923
                     /locus_tag="VNY79_08215"
     CDS             1240..4923
                     /locus_tag="VNY79_08215"
                     /inference="COORDINATES: protein motif:HMM:NF020037.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HWX72468.1"
                     /translation="MAERIRGFDWSRTPLGPSEGWSPALRTTVGLMLANRFPMLLWWG
                     PDYICIYNDAYIPILGLKHPNALGLPVRECWSEIWDILKPLIDTPFSGGPSTWIEDFE
                     LHIQRSGFTEETHFTVAYSPAPDAATPSGIGGVLATVHEISQKVVAERRVSILRDLGT
                     EAAENTAEETCRVAVQTLARHSKDVPFALLYLVDPDGAHARLAGAAGTEPGQGASPQV
                     VSLDPAGTDPGWPLAVAFRGHGIVEVTNLSSRFDAVPVGPWPEPPHAAVLLPLRSNKA
                     DKPFGLIVGGVSSRLKLDEQYKSFYELAANQIATTIAKARAYEEERKRAETLAEIDRV
                     KTAFFSNVSHEFRTPLTLMLGPLEELKRELGRTPDAQSSPPYQQVDLIQRNGLRLLKL
                     VNTLLDFSRIEAGRVRAAYEPVDLSAFTAELASVFRSAVEQAGLRLDIDCPPMSEPAY
                     VDREMWEKIVLNLVSNAFKFTFEGVIEVKLRNSGAHFELTVRDTGTGIPADELPKLFE
                     RFHRVAGARGRTYEGSGIGLALVQDLVRLHGGTVAAESTYGEGTTFCVRVPLGRSHLS
                     PAQVGSAAVRVSTAIGSQSFVEEALRWLPDTGSDDEPVTWDAPAGEQTEGEPAERPRL
                     LLVDDSADMRDYVRRLLGARYDVQVAEDGEAAHAAIEKHPPDLVLSDIMMPRLDGLGL
                     LTRLRSNPRTSTLPIILLSARAGEEARVEGLQTGADDYLIKPFTARELLARVAANLAT
                     ARIRRDAAKAAEASEARLAAVLRQIPLAVGATDQSGRMVIANAAMRRFASSVVPSRDA
                     ERMERWRAWAPDGSLLEPSEWPGARALRGETVVPGIEMLFVDDDGRETWNLVSTAPMR
                     DAAGAVVGAIAVVQDIEERKKAEETQRLLVAELNHRVKNTLASVQAIAHQMLRRTKND
                     PAEFVTSFSGRIQSLSRVHTMLSSATWQGVDLRDLIRDQLLAGAVDETRITAWGPAVH
                     LEAQLALHTALMLHELGTNAIKYGALSTAKGIVTISWSVADATLRLRWEERGGPVVRA
                     PARRGFGRTLIEQSAKGEGGDALMSIEAEGVVWNIALPLSEHRPMKSSAAEFASGAAH
                     GVATSVEKDTPRLAGKRILVVEDEPLVALDIVAALEGVGAEVVGSAGSAKEALSLIDD
                     TALDAALLDANLRGHPVDEIAAALAARNIPFLFVTGYGPGSLPKAFAKTAMLSKPFSQ
                     EQLVAAVTSLVEVPASVLRLRRQ"
     gene            complement(5096..7258)
                     /locus_tag="VNY79_08220"
     CDS             complement(5096..7258)
                     /locus_tag="VNY79_08220"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HWX72469.1"
                     /translation="MSTARESAVRLLQWMMIASVVLPTALFTYASWVSYRDVHAVTDE
                     RIGRSLDVMQEQALKVFQTVDRTFAEVDEILRGMSDEDIRVDQPRLHERLARIVATMP
                     QLYGILLVDRGGRPLAASTLAAVPDGVLFNDRDYFQAQLEHDAGTYVSDMRSPRLPGI
                     ATDFFDLSRRLATTDGSFGGVIAVAVRPAYFEDFYALIGRTPGSFFSLVRDDGSILAR
                     FPLVPDRSQKLSPNSGLRTAISRGSNHGLYTIESEIDGVSRRIGFRRLPGFPVYALAG
                     VTGAASRAEWLSHMGTYLFVGLPATLLVFIVLWVALRRTRRLYEEADRREAAEGALRQ
                     AQRLEAIGQLTGGVAHDFNNLLMVVSGSVHRLRRDLHDEKHTRLLDAITNATQRGESL
                     TRQLLAFSRRQTLQPSVIDLAKHLPELKDLLSRSLGEDIEIQVRVANRACLVKVDPSE
                     LELALLNLAVNARDAMPSGGMLTITAKPIVLRGKPGDEGLSGEFIAVKVADTGLGIPS
                     DILPRVFEPFFTTKEVGKGTGLGLSQVYGFARQSGGAATITSAVRRGTAITMFLPRSF
                     ETPAPPREPSIAPEAVERAGTVLLVEDNAEVAEVARAYLADLGYDVKAAANAPAGLAL
                     IEADGGIDLVFSDILMPGAMSGLDLARAVRQRFPEIVVLLTSGYSSSAQEAVRQGFAV
                     LPKPYDLATLQRALAAARKAAGKGGRQAAPPVPQCAAG"
     gene            complement(7464..7865)
                     /gene="msrB"
                     /locus_tag="VNY79_08225"
     CDS             complement(7464..7865)
                     /gene="msrB"
                     /locus_tag="VNY79_08225"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003613277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033743 - peptide-methionine (R)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HWX72470.1"
                     /translation="MDTKQYPVTHTDAEWHKLLTLEQFKIMRGHGTEPPGSCALNHEK
                     RPGTFSCAGCGQPLFASKQKFESGTGWPSFNDPVAGAVETSTDRSYGMMRTEVHCSSC
                     GSHLGHVFEDGPPPTHLRYCINGVAMNFKPD"
     gene            complement(8239..9528)
                     /gene="murA"
                     /locus_tag="VNY79_08230"
     CDS             complement(8239..9528)
                     /gene="murA"
                     /locus_tag="VNY79_08230"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008760 - UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase activity [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HWX72471.1"
                     /translation="MDRIRIVGGRPLSGTIPISGAKNATLPLMIASLLTEETLVLDNV
                     PRLADVGLLQRILGNHGVDVMVSGKRSGETADHGQTLHISAAHIVDTTAPYDLVSKMR
                     ASFWVIAPLIARMGEARVSMPGGCAIGTRPVDLLIMAIERLGAKIDIEGGYVIAQAPK
                     GLRGGEIVFPKVTVGGTHTAIMAASLANGTTVIENAAREPEIVDVADCLNKMGARISG
                     AGTSRVIIEGVAKLGGARHSVLPDRIETGTYAMAVAMAGGDVLLQNARPELLQAALDV
                     LQGAGATVISNNQGIRIARNGSALAPVEVTTAPFPAFPTDLQAQLMALMTRARGTSHI
                     VETIFENRFMHVQELARLGARIQLDGEKATIEGVERLKGAPVMATDLRASVSLVIAAL
                     AAEGETIVNRVYHLDRGFERLEDKLSRCGAAIERLAG"
     gene            complement(9574..9777)
                     /locus_tag="VNY79_08235"
     CDS             complement(9574..9777)
                     /locus_tag="VNY79_08235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72472.1"
                     /translation="MRKRGKVEQQAARSARLSAALRENLKRRKAQARGRAVTRVADVH
                     GSAETGRGTAPTTPDFRRNRGRD"
     gene            complement(9790..10386)
                     /locus_tag="VNY79_08240"
     CDS             complement(9790..10386)
                     /locus_tag="VNY79_08240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4337 domain-containing protein"
                     /protein_id="HWX72473.1"
                     /translation="MPEAHEQLEQAEHVEETAHSNRRIALLIAVLALFLSFSETLGKS
                     AQTEAISENVESANLWSFFQAKTVRMTMVRTAAEEMKVTAAAINDPAAKEAMEKQIEA
                     WQKTAARYDSEPETNEGRKELSARAKEAQERRDLELAKYHHYEISSAAFQIGIVLASA
                     AVITGAVALVWLAGALGVAGLAILALGLFAPHLAHHFL"
     gene            complement(10462..11412)
                     /locus_tag="VNY79_08245"
     CDS             complement(10462..11412)
                     /locus_tag="VNY79_08245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0007059 - chromosome segregation [Evidence
                     IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HWX72474.1"
                     /translation="MAPNSELTGVAPKVAAEIGSWLRHLGDERRMSPKTVEAYRRDVV
                     QFLGFLAAHRGGAPSLKDLSALEPADVRAYMAARRAEGIGSRSLMRMLAGVRGFGRFL
                     ERSGKGKVGALAAVRTPKIPKTLPRPLSIGAAKQMADPALAAGDERPQWIHARDAAVL
                     ALLYGGGLRISEALGLRRSDFAGGMREVITVTGKGRKERMVPVLPQVQQLVADYLALC
                     PHEVGEDGPLFVGAKGGPLSARVVQLAMARLRGALGLPETATPHALRHSFATHLLARG
                     GDLRSIQELLGHASLATTQIYTEVDAERLIAAYRAAHPRA"
     gene            11555..>12329
                     /locus_tag="VNY79_08250"
     CDS             11555..>12329
                     /locus_tag="VNY79_08250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009341257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HWX72475.1"
                     /translation="MAKRVVDVLVPVALDKPYSYRVPEALELAPGDIVSVPLGARAAT
                     AVVWAENPTPNPRLDNRLKDVAEKLDLPPLRGELRRFVDWVANYTVASRGMVLRMCLR
                     MGEHLGAERERVGVRLAGPPPQRLTGARQRVLALLADGMMRAKADAAREAGVSTGVID
                     GLIDEGTLETIVLPPEAAAEKPDPDFARSDFSGDQGAAAAALTATLAKGGYSVTLLDG
                     VTGSGKTEVYFEAVADRIRRGRQSLVLMPEIALTAQFLDR"
BASE COUNT         2025 a         4040 c         4131 g         2133 t
ORIGIN      
        1 acgatcgcct ggttcgcgtt cttcacgttc ctctccggat tcacccagaa tttcgagcag
       61 ctccttatcg tgcgcggctt gcaggggctc ggcttcggcg gcgaatgggc ggccggttcg
      121 gtgctgatcg gcgaagtgat ccgtaccgaa aatcgcggca aggccgtcgg cacggtgcaa
      181 agcgcctggg cctggggttg gggcgcggcg gcgatcctcg ccaccatcat gttccaatta
      241 cttccgcagg aaatcgcctg gcgcgcgctg ttcttcgtcg gcctgttgcc tgctttgctg
      301 atcttctaca tccgcgccaa cgtgccggag ccgaagattt tccgcgaggc ggccacggcg
      361 gcgacacggc gcggcacgct cgacatcttc ggtcccgacc tgctcgcgac caccatcgtc
      421 ggcgccgttc tcgccaccgg cgcgcagggc ggttactacg cgatcaccac cttcctgccg
      481 acgtttctgc gcacccagcg tcacctcacg gtaatgggta ccggcggcta ccttgccgtg
      541 atcatcgtcg gctcgtgggt cggctacatc gtcagcgcct acctcaacga cgcgatcggg
      601 cggcggaaga atttttttat cttcgcgatc ggctcgctcg tcatcgcggt ggcctacacc
      661 caggccgaga tacccaactc gctgatgctg gtgctcggat tcccgctcgg cttcttcgcc
      721 tcgggcattt tcagcggcat ggggccggtg ctgaccgaac tcttcccgac cagcgtacgc
      781 ggggccgggc agggtttttg ctacaatttc ggccgcggca tcggcgcctt cttcccgact
      841 ctggtcggca cattgtccgc tacggtgccg ctgggcaccg caatcggcat cttcgcggcg
      901 tgcgcttatg ccgtggtcat cctcgccgca ttgatgctgc ccgagacccg tggccggaag
      961 ctgctggcga actaaagcaa gcacgccgcc agcgagcggc gcacgggccg gcagtcagtc
     1021 tcagcatgct ccgccgcagg ccctttggtc gccagcggac aaattcggcc tagtggggaa
     1081 ccatctccgt cccttgacca tttcggatat ggccccgcca gcgccgggcc gtagtcgcgt
     1141 gctttcgccg gatatgcggc gttcgcgggg ggaaagaatt tgcgtaggga agcccgaccg
     1201 cttgtagaat cgagcgaatg gctcgtcggc ggcggcgaga tggccgagcg catccggggc
     1261 ttcgattggt ccagaacgcc gttagggcca tccgagggtt ggtctcctgc cctgcgcacc
     1321 accgtcggtt tgatgctggc caacaggttt cccatgctgt tgtggtgggg gcccgactac
     1381 atttgcattt ataacgatgc ctacattcca attctcggcc tcaagcaccc gaatgcgctg
     1441 ggtctgcccg tgcgcgagtg ctggtccgaa atctgggata tcctcaagcc cctgatcgac
     1501 acgccgttca gcggcggacc gtccacctgg attgaagatt ttgagcttca catccagcgt
     1561 tcgggcttca ccgaggagac gcactttacc gttgcctaca gtccggcgcc cgacgccgcc
     1621 acgccgagcg gtatcggagg cgtgctcgcc acggtgcacg agatcagcca aaaggtcgtt
     1681 gccgagcgcc gcgtttccat tttgcgcgat ctgggcacgg aggcggcgga gaacactgcc
     1741 gaagaaacat gccgcgtcgc ggtgcagacg cttgcccggc acagcaagga tgtcccgttc
     1801 gcacttctct acctggtcga tccagacggt gcgcacgcgc gattggcggg agcggccggg
     1861 accgagcctg ggcaaggcgc aagtccgcag gtcgtgtcgc ttgacccagc cggcaccgat
     1921 ccgggttggc cgctcgcggt cgcgttccgc ggacacggca ttgtcgaagt gaccaacctc
     1981 tcttcgcgct tcgatgcagt gcctgtcggg ccgtggcccg aaccgccgca tgccgctgtg
     2041 cttctgccgc tgcgctcaaa taaggctgac aagccatttg gactgatagt cggcggtgtc
     2101 agttcacgac tgaaattgga tgaacagtac aaaagctttt atgagcttgc ggcaaaccag
     2161 atcgcgacga ccatcgccaa agcgcgcgcc tatgaagaag agcgcaagcg ggccgagact
     2221 ttggcggaaa tcgaccgtgt caagactgcg ttcttctcga atgtcagcca tgagtttcgc
     2281 acgccgctca cgctgatgct ggggccgctg gaggaattga agcgcgagtt gggccgtacg
     2341 cccgacgcgc agtccagccc gccgtatcaa caggtcgatc tcatccagcg taacggtctg
     2401 cggttgctga agctcgtcaa tacgctgctc gacttttcgc gcatcgaagc cgggcgcgtc
     2461 cgggcggcat acgaaccggt cgacctttcg gctttcacgg cggagcttgc gagtgttttt
     2521 cgctcggctg tcgagcaggc cggattgcgg ctcgacattg attgtccgcc aatgtccgag
     2581 ccggcgtatg tcgatcggga aatgtgggaa aagatcgtcc tcaatctcgt ctcgaatgcc
     2641 ttcaagttca ctttcgaggg tgtcatcgag gttaaactgc gtaacagcgg cgcgcacttc
     2701 gaactcacgg tccgcgacac cggcaccggc atccccgccg atgagttgcc aaagctcttc
     2761 gaacgcttcc accgcgtcgc aggtgctcga gggcgaacgt atgaaggttc agggatcggg
     2821 ctggcattgg ttcaggacct cgtgcggctg catggcggca cggttgcggc cgagagcacc
     2881 tacggcgaag gcacgacgtt ctgcgtccgc gtcccgctcg gaaggagcca tctctcacca
     2941 gcgcaggtcg ggtctgccgc cgtgcgggtg tcgaccgcga tcggatcgca gtcgttcgtc
     3001 gaggaggcct tgcgctggct cccggacacc gggtcggatg atgaaccagt cacttgggat
     3061 gctcctgctg gcgagcagac cgaaggtgag ccagccgagc gtccgcggct ccttctcgtc
     3121 gacgatagtg ctgacatgcg cgactacgtg cgacgcctgc ttggcgcacg ctacgacgtg
     3181 caggtggcgg aagatggtga agctgcacac gccgcgatag agaagcaccc gcctgatctg
     3241 gtgttgagcg acatcatgat gccgcggctc gacggcctcg gcctgctgac gcggcttcgg
     3301 tcaaatccgc gcacaagcac cctgcccatc atcctgctat cggcccgggc tggggaggaa
     3361 gcgcgggtcg agggactgca gacgggagcc gatgactacc tgatcaagcc gttcacggcc
     3421 cgcgaattgc tggcccgcgt cgccgccaat cttgcaacgg cgcgcattcg ccgggacgcc
     3481 gcgaaggcgg cggaggcgag tgaggcccgt ttggcggctg tgcttcggca gattccgctg
     3541 gcggttggcg cgacggacca aagcggccgc atggtcattg ccaacgccgc gatgcggcgg
     3601 ttcgcgtcct cggtcgttcc ctcgcgcgat gcggagcgca tggaacggtg gcgtgcgtgg
     3661 gcgccggacg ggtcgctctt ggaaccaagc gagtggccag gtgcccgggc gctgcggggc
     3721 gagaccgtcg tgccgggcat cgagatgctc ttcgtcgacg atgacgggcg cgagacttgg
     3781 aacctggttt cgaccgcgcc gatgcgagat gctgccggcg cggtcgtcgg cgccatcgcc
     3841 gtggtgcagg atatcgaaga gcgcaaaaag gcggaggaga cgcaacggct cctggtggcc
     3901 gagctcaatc accgcgtcaa aaatacgctc gcgagcgtgc aggcgattgc gcatcaaatg
     3961 ctgcggcgga ccaagaatga tcccgctgaa ttcgtgacca gcttctccgg gcgcattcaa
     4021 tcgctctcac gcgtccatac gatgctgagc agtgcgacat ggcagggcgt cgatctgcgc
     4081 gacctgattc gcgatcaatt gctggctggg gccgtcgacg aaacgaggat cacggcctgg
     4141 ggtccagcgg tccatctgga ggcacaactg gcactgcata cggcgctgat gctccacgag
     4201 ctcggcacca acgcgatcaa gtacggagcg ctatcgaccg cgaagggaat cgtgaccatc
     4261 agttggtccg tggcggatgc aacgcttcgt ctgcgctggg aggagcgcgg cggccccgtc
     4321 gtgcgtgcgc cggcgaggcg cggcttcggc agaacattga tcgagcaaag cgcgaaagga
     4381 gaagggggcg acgcactcat gtcgatcgaa gccgaggggg ttgtctggaa catcgccttg
     4441 ccactgagcg aacaccggcc catgaagtcg tcagcagccg aattcgccag cggcgcggcg
     4501 cacggcgtgg cgacctccgt cgagaaagac acgcccagac tggcaggaaa gcgtattttg
     4561 gtggtggagg atgagccact cgttgcgctc gatatcgttg ccgcgctcga aggcgtcggc
     4621 gccgaagtgg taggatcggc ggggtcagcc aaagaagcgc ttagcctcat cgacgacacg
     4681 gcgctcgatg cagcgctgct ggatgccaac ctgcgcggac atcccgtcga cgagatcgca
     4741 gccgcgctcg cggcccgcaa catccccttc ctgtttgtga ccggctacgg gccgggaagc
     4801 ctgccgaagg ctttcgccaa gacagccatg ctctccaagc ccttcagcca ggagcaactg
     4861 gtcgcggccg tgacgtcgct cgtggaggta cctgcgtccg tacttcgtct gagaaggcaa
     4921 tgacggcaca ggatttgggc aggttgcgta gcggccccac gcggacctcc cgcgatgtct
     4981 gctttcacgc cgctgctgga ggagaaaacg gacagcgcgc ggttgcgcca ttccatttca
     5041 tgaatacgcg gctgacaaat ggagccgttc gcaaactgac gggggcctcg gcagttcacc
     5101 ccgccgcgca ttgcggcacc ggcggtgcgg cctgccggcc ccctttgccg gcggccttgc
     5161 gcgcggctgc gagggcccgt tgcagcgtgg ccaggtcgta gggtttgggc agcaccgcaa
     5221 agccttggcg cacggcctcc tgcgcgcttg aactataacc ggacgtcagc agcacgacga
     5281 tctcggggaa gcgctggcgc acggcgcggg cgagatcgag cccgctcatg gcgccgggca
     5341 tcaggatatc ggagaagacg agatcgatgc cgccgtcggc ctcgatgaga gcgaggccgg
     5401 caggcgcgtt cgcagcggct ttcacgtcat agccgaggtc ggcgagatag gcgcgcgcaa
     5461 cctcggcgac ttccgcattg tcctcgacca gcagcacggt gccggcgcgc tcgaccgctt
     5521 ccggcgcgat cgaaggctcg cgcggaggcg ccggcgtctc gaagctgcgc ggcagaaaca
     5581 tcgtgatcgc cgtgccgcgg cgcaccgcgc tggtgatggt cgcggcgccc cccgattgcc
     5641 gggcgaagcc atagacctga gacagcccca gcccggtgcc cttgccgacc tccttggtgg
     5701 tgaagaacgg ctcgaacacc cgcggcagaa tatcggaggg gatgcccaga cccgtgtccg
     5761 cgaccttgac cgcgatgaac tcgccgctaa ggccttcgtc gccgggcttg ccccgcagca
     5821 cgatcggctt cgccgtgatc gtcagcatgc cgcccgacgg catggcgtcg cgcgcgttca
     5881 ccgcgagatt gagaagtgcg agttccagct cgctcggatc caccttgacc aggcacgcgc
     5941 ggttggcaac gcgcacctgg atctcgatgt cctcgcccag cgaccggctg agcagatcct
     6001 tgagctcggg aaggtgcttg gcgagatcga tgacgctcgg ctgcagcgtc tgccgccgcg
     6061 agaaggccag cagctggcgg gtgaggctct cgccgcgttg cgtggcgttg gtgatcgcat
     6121 cgagcaggcg cgtgtgcttc tcgtcgtgga gatcgcggcg cagccgatgc acgctgccgc
     6181 tgacgaccat gaggaggttg ttgaaatcgt gggcgacgcc gccggtcaat tgaccgatgg
     6241 cttcgagccg ctgcgcctgg cgcaacgcgc cttccgccgc ctcgcggcgg tcggcctcct
     6301 cgtagagacg ccgggtgcgc cggagcgcca cccagaggac gatgaaaacc agcagcgtcg
     6361 ccggcagccc gacgaacagg tacgttccca tgtgcgacag ccactcggcg cggctcgcgg
     6421 cgccggtcac tcccgccagc gcatagaccg ggaagccggg aagccggcga aagccgatgc
     6481 gccgggaaac gccatcgatc tccgactcga tcgtatacaa tccgtggttg ctgccgcggc
     6541 tgatggcggt gcgcaaaccg ctgttcgggc tcagtttctg cgagcggtcg gggaccagcg
     6601 gaaagcgggc gagaatcgag ccgtcgtcgc gcaccaacga gaagaagctg cccggcgtcc
     6661 gcccgatcag cgcgtaaaaa tcctcgaaat aagccggccg cacggctacc gcgatgacgc
     6721 cgccgaagga gccgtccgtc gtcgccaggc ggcgggagag gtcgaagaaa tcggtggcga
     6781 tgcccggcag gcgcggcgag cgcatgtcgc tgacgtaagt cccggcgtca tgctcgagct
     6841 gggcctggaa atagtcgcga tcgttgaaga gtacgccgtc cggcaccgcc gcaagcgtgc
     6901 tcgcggcgag cggcctgccg ccccggtcga cgagcaggat gccatacagt tgcggcatcg
     6961 tcgcgacgat gcgggcgagc cgctcgtgca gccgcggctg gtctacgcgg atatcctcgt
     7021 cggacatgcc gcgcaggatc tcatcgacct cggcgaaggt ccgatcgacg gtctgaaaga
     7081 ctttgagcgc ttgctcctgc atcacgtcga gcgaacgacc gatgcgttcg tcggtcaccg
     7141 cgtggacgtc gcggtagctg acccaggagg cataagtgaa cagcgccgtc ggcagaacca
     7201 ccgacgcgat catcatccat tgcagcagac ggaccgccga ttcccgtgca gtgctcatcg
     7261 ctctgactgt ccggcgatta ttcggcgata atcgggcaag tatccagcaa attcaccagt
     7321 gccggcagct gattgattgt gcagcaatgc ggcatgattt gccgcaggat gttgcaattt
     7381 catgacaacc gcggagcgag ccgagccgcg tccgcggcga aaagccacgc gggcgccgtc
     7441 gtttgcctgg acgacgcaag gcctcagtcc ggcttgaaat tcatcgccac gccgttgatg
     7501 caatagcgca aatgcgtcgg cggcgggccg tcctcgaaca cgtggccgag atggctgccg
     7561 cagctgctgc aatgcacctc ggtgcgcatc atgccgtagc tgcggtcggt cgaggtctcg
     7621 accgctccgg cgaccggatc gttgaagctc ggccatccgg tgccactctc gaacttctgc
     7681 ttcgaggcaa acagcggttg cccgcagccg gcgcaggaga acgtaccggg ccgcttctcg
     7741 tggttgagcg cgcagctccc cggcggctcg gtgccgtgcc cgcgcatgat tttgaactgc
     7801 tccagcgtga gcagcttgtg ccactccgcg tcggtgtggg tgacgggata ttgcttggtg
     7861 tccatggccg ggccgcccgt tcgctgatga tcctgcgatc ctgggaaacg taagcgctaa
     7921 atggcaaagc gcaatcgcgt catgcccgga cccggggctg cggcgccgcc cggaagccgt
     7981 cggctccgtg ttcctacgga gcccgatgtt agcatcgcgg caagaaccgg cggcccgccg
     8041 tcgatcccgc aagggtgaaa ctgcgacgca gtgaacggct ccgccgatcc cgagagtgcc
     8101 ccttaggccg gcggggccgt tcatgacccg gaattcgcgg gcgtcgtctg acgcgatgtc
     8161 cggtcgtgtg ccgtcgtgtg caaggcattt gcgccttcgc agggcggaca gccgcgccgc
     8221 gatcgacccc cgcggaggtt accctgccag gcgctcgatc gctgcgccgc agcggctgag
     8281 cttgtcttcc aggcgctcaa aaccgcggtc gaggtgatag acgcggttga cgatggtctc
     8341 gccctcggcg gcgagcgcgg cgatgaccag cgaaaccgag gcgcgcaggt cggtcgccat
     8401 caccggcgca cccttgagcc gttcgacgcc ttcgatcgtc gccttctcgc catcgagctg
     8461 gatgcgcgcg ccgagccgcg ccagctcctg cacgtgcatg aagcggttct cgaaaatcgt
     8521 ctcgacgatg tgcgaggtgc cgcgcgcgcg cgtcatcagc gccatcagct gcgcctgcag
     8581 atcggtcggg aacgccggga acggcgccgt cgtcacttcg accggcgcca gcgccgaccc
     8641 gttgcgcgcg atgcggatgc cctgattgtt tgagatcacg gtggcgccgg cgccctgcag
     8701 cacgtcgagt gcggcctgca ggagctcagg tcgcgcgttc tgcagcagca cgtcgccgcc
     8761 ggccatcgcc accgccatgg cgtaggtgcc ggtctcgatg cggtcgggta gcacgctgtg
     8821 gcgcgcgccg ccgagcttgg cgacgccttc gatgatgaca cgtgacgtgc cggcgccgga
     8881 aatgcgcgcg cccatcttgt tgaggcagtc ggcgacatcg acgatctccg gctcgcgggc
     8941 agcgttctcg atcactgtcg tgccgttagc cagcgaagcc gccatgatcg cggtgtgggt
     9001 gccgccgacc gtgaccttgg gaaaaacgat ctcgccaccc ctgaggccct tcggcgcctg
     9061 cgcgatgacg tagccgcctt cgatatcgat cttggcgccg agccgctcga tcgccatgat
     9121 caaaaggtcg accgggcggg tgccgatggc gcagccgccg ggcatggaga cacgcgcttc
     9181 gcccatgcgc gcgatcagcg gtgcgatgac ccaaaaactc gcccgcatct tggaaacgag
     9241 atcgtaggga gcggtcgtgt cgacgatgtg ggcggcggag atgtgcagcg tctggccgtg
     9301 gtcggcggtc tcgccggaac gcttgccgct gaccatgacg tcgacgccgt ggttgccgag
     9361 gatgcgctgc agcagcccga cgtcggcgag ccgcggcaca ttgtcgagaa caagagtctc
     9421 ctcggtcagg aggctcgcga tcatcagcgg tagtgtggcg ttcttagcgc ctgatatcgg
     9481 aatggtgccg ctcagcggcc ggccgccgac gatgcgaatg cgatccattg tcaccccttg
     9541 ccgccccacc cccggggctt agtcaatcgc ccgctaatcg cgaccccgat tgcggcgaaa
     9601 gtcgggagtt gttggtgcgg ttccgcggcc ggtttcggcg gagccgtgca cgtcagccac
     9661 gcgggtcaca gcacggccgc gcgcctgcgc cttgcgccgc ttgagatttt cgcgcaacgc
     9721 cgcggagagg cgggcgctgc gcgccgcctg ctgctcgacc ttgccgcgtt tgcgcatccg
     9781 tttcgccgcc tacaaaaagt ggtgcgcgag gtgcggcgcg aacaggccga gcgccagaat
     9841 cgcaagcccg gcgacgccga gcgcgccggc gagccagacg agcgcaacgg cgccggtgat
     9901 caccgccgcc gaggcgagca cgatgccgat ctgaaacgcc gcggaagaga tctcgtagtg
     9961 atggtacttc gccagctcga ggtcgcgcct ttcctgcgcc tccttggcgc gcgccgatag
    10021 ctccttgcgg ccttcgttag tctccggctc cgaatcgtaa cgcgcggcag tcttttgcca
    10081 ggcctcgatc tgcttctcca tcgcctcctt ggccgccggg tcgttgatgg cggctgccgt
    10141 gaccttcatc tcctccgcgg cggtgcggac catcgtcatg cgcacggtct ttgcctggaa
    10201 aaacgaccag agattcgcgg actcgacgtt ctcgctgatc gcctcggtct gcgcgctctt
    10261 gccgagcgtt tccgagaacg agaggaacag cgccagcacg gcgatcagga gcgcgatcct
    10321 cctgttcgag tgcgccgtct cttcgacatg ctcggcttgt tccagctgct cgtgtgcttc
    10381 cggcatttgt cgtcccctcg ctcgccattc cgggcccgcc gctgcgcagc gccccaggat
    10441 gacggataac acagatcaga ctcaggcgcg cggatgcgcg gcgcgatagg cggcaatcag
    10501 ccgctcggcg tcgacttcgg tgtagatctg tgtcgtcgcc agcgaggcat ggccgaggag
    10561 ctcctggatc gagcgcaggt cgccgccgcg cgcgaggagg tgggtcgcga aggagtggcg
    10621 caaggcgtgc ggcgtcgccg tctcgggcag gccgagcgcg ccgcgcagcc gcgccatggc
    10681 gagctgaacg acccgcgccg agagcgggcc gcctttggcg ccgacaaaca acggaccgtc
    10741 ttcgccaacc tcgtgcgggc agagcgcgag ataatcggca acgagttgtt gcacctgcgg
    10801 cagcaccggg accatgcgct ccttgcggcc cttgccggtg accgtgatca cctcccgcat
    10861 gccgccggca aaatcgctgc gcctgagtcc gagcgcctcg gaaatgcgca gcccgccgcc
    10921 gtagagcaga gcgagcacgg cagcgtcgcg ggcgtgaatc cattgcgggc gctcgtcccc
    10981 ggcggcgaga gcggggtcgg ccatctgttt cgccgcgccg atcgacagcg gccgcggcaa
    11041 tgttttggga attttcggcg ttcgcaccgc cgccagtgcg ccgaccttgc ctttgccgct
    11101 gcgttcgagg aagcggccaa acccgcgcac gccggcgagc attcgcatca gcgaacggct
    11161 cccgatgccc tcggcgcggc gcgccgccat gtaggcgcgc acgtccgcgg gctcgagcgc
    11221 ggaaaggtcc ttgagcgacg gcgcgccgcc gcgatgcgcg gcaaggaagc cgagaaactg
    11281 caccacgtcg cgccggtagg cctcgaccgt cttcggcgac atgcggcgct cgtcgccgag
    11341 atgccgaagc cagctcccga tctcggccgc gactttcggc gccacgccgg tcagttcgct
    11401 gttcggagcc atcgtccgct cctccgcgcg caagcgggac ccagttcttc gctgcatttc
    11461 ggtactggat tcccgctttt gcgggaatga gcggagcata tgccctcgcc ctttgccctt
    11521 ccttaaccgg ctggaatcgg gaaaccatgg gggcatggca aagcgtgtcg tcgatgtcct
    11581 cgtcccggtg gcgctcgaca agccctattc gtaccgggtg ccggaagcgc tcgagcttgc
    11641 gccgggcgac atcgtttccg tgccgctcgg cgcgcgcgcg gcgacggcgg tggtatgggc
    11701 agagaacccg acgcccaatc cgcgcctcga caaccgcctc aaggacgtcg cggaaaagct
    11761 cgacctgccg ccgctccgcg gcgagctgcg ccgcttcgtc gactgggtgg ccaattacac
    11821 ggtggcgtcg cgcggcatgg tgctgcgcat gtgcctgcgc atgggcgagc atctcggtgc
    11881 cgagcgcgaa cgcgtcggcg tgcgcctcgc cggcccgccc ccgcaacgcc tgaccggcgc
    11941 ccgccagcgc gtgctcgcac tgctcgcgga tggcatgatg cgcgccaagg ccgatgcggc
    12001 gcgcgaagcc ggggtgagca ccggcgtcat cgacggcctc atcgacgaag ggacgctcga
    12061 aacgatcgta ttgccgccgg aggcggccgc cgaaaaaccc gatcccgatt ttgcgcgctc
    12121 ggatttttcc ggcgaccagg gcgctgccgc cgccgctctg acggcgacgc tcgccaaggg
    12181 cggctattcc gtcacgctcc tcgacggcgt caccggctcg ggaaagaccg aggtctattt
    12241 cgaggcggtg gcggaccgca tccgccgcgg ccggcagagc ctcgtcctga tgccggagat
    12301 cgcgctcacc gcgcaattcc tcgaccgct
//
LOCUS       DATMQB010000281         2569 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3823909, whole genome shotgun sequence.
ACCESSION   DATMQB010000281 DATMQB010000000
VERSION     DATMQB010000281.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2569)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2569)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2569
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3823909"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1254)
                     /locus_tag="VNY79_08255"
     CDS             complement(<1..1254)
                     /locus_tag="VNY79_08255"
                     /inference="COORDINATES: protein motif:HMM:NF005686.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HWX72476.1"
                     /translation="MVSAAADADEPDPDRRCVLGGLTTGAILGTTAYAIPQPAAAASP
                     SDIVMMDAASLESVIHSRKASCVEVMSAYLDHVERLNAKVNAIVALQDRAQLLAQARE
                     RDAELARGESKGPLHGFPHAVKDLLPVKGIRSTWGSPLLKNFVPAADSLLVERLRNAG
                     AIIIGKTNAPEFGLGSHTYNPVYGATLNAYDQSRSAGGSSGGAAVTLALRMLPLADGS
                     DYGGSLRNPAGWNNVLGFRTSFGRVPIDGLEVWLPSMGVAGPMARNVSDLAMLLSVLA
                     GFDARAPLSMDDDASVFQRRRLEREFKGTRIAWVGDFKGYTPCEPEVIEVCKSALKAF
                     ESIGCAVEEAVPDYPLDAVWRAVMKLRAWQAGSGLLAFYNDPAKRALLKPEVIYEVES
                     GLKLSAYEVTAASVVRTEWYKAVRAF"
     gene            2018..2533
                     /locus_tag="VNY79_08260"
     CDS             2018..2533
                     /locus_tag="VNY79_08260"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF015679.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HWX72477.1"
                     /translation="MRAASLPEGELAPGVDGGSSDAEVSYVFRRQPVFYRTTHPVGTI
                     IIDKPQHFLYLIQPKSVALRYGIAVGSQCTDLAGLRRISNKAEWPAWQPTPELVARRL
                     APAGVMPGGPGNPLGARLLALEDGNSIHGTNAPKAIGNPAVFGCIRLVNDDVVDLYQR
                     VPVGGRVVVTN"
BASE COUNT          445 a          857 c          819 g          448 t
ORIGIN      
        1 aaacgcccgc actgccttgt accattcggt gcgtacgacc gacgccgcgg tgacctcgta
       61 ggccgatagt ttgagaccgc tctcgacctc gtagatcacc tccggcttga gcagggcgcg
      121 ttttgccgga tcgttgtaga acgcgagcag cccactgccc gcctgccacg cgcgcaactt
      181 catcactgcg cgccaaaccg catcgagcgg atagtccggc accgcctctt ccaccgcgca
      241 gccgatcgat tcgaaggcct tcagcgcgct cttgcagacc tcgatgactt ccggttcgca
      301 cggcgtgtag cccttgaagt cgcccaccca ggcgatgcgc gttcccttga actcccgttc
      361 caatcgccgc cgctgaaaga cgctcgcgtc gtcgtccatg gacaacggcg cgcgcgcgtc
      421 gaagccggcc aggacggaaa gcagcatcgc caggtcgctg acgtttctgg ccatgggtcc
      481 ggccacgccc atcgagggga gccagacttc gagcccgtct atcggcaccc ggccgaagct
      541 cgtgcggaag ccgaggacat tattccaccc ggcgggattg cgcaggctgc cgccgtaatc
      601 cgaaccatct gccagcggca acatgcgcag cgcgagggtg accgcggcgc cgccactgct
      661 gccgcccgcg gagcgcgatt ggtcataggc gttgagggtc gcgccataga cgggattgta
      721 ggtgtgcgag ccgaggccaa actccggcgc gttggtcttg ccgatgatga tggcgccggc
      781 gttgcgcagc cgctcgacca agaggctgtc cgccgccggt acgaaattct tcaggagcgg
      841 ggagccccag gtcgagcgga tgcccttgac cggcagcaaa tccttgaccg catgaggaaa
      901 gccgtggagc ggccccttcg actcgccgcg cgccagctcg gcgtcgcgct cccgcgcctg
      961 cgccagcaat tgagcgcggt cttgcagcgc gacgatcgca ttgaccttcg catttagcct
     1021 ctcgacatga tcgaggtacg cgctcatgac ttcgacgcat gaggcttttc gcgagtggat
     1081 gacgctttcc agggaagcgg catccatcat cacgatatcc gacggagagg ccgccgcggc
     1141 cggctgcgga atggcgtagg ctgtcgtgcc tagtatggcc ccggtcgtca gaccgccgag
     1201 gacgcatctg cggtccggat cgggttcgtc tgcgtcagcg gcggccgaaa ccatgctaaa
     1261 cccctaactc gccactgcgc caagctacgc tcgtttgcgc cgggctgaaa cagtttcgct
     1321 ggatcattgg cgttcccttc gaaatgcgcc ggaatggcgg cgcatcctcg ccgcccgacc
     1381 tgggatttca ccgtcgctca accgggtcgc ggctcgctcg gtccggactg caccctgcct
     1441 tcggcttctc gcggagcgaa ttgcgcatgg cccgacaatc tggtctgctg agagcacgga
     1501 gtttcatctg gatgtgtcgc ggggcgtaaa gggctcgatg gcgaactact acgaaatctt
     1561 gtcgcgagcc ttgcgaagag gtgatgccgc agacgagcgc tggcgtcgcg atgtctacgg
     1621 gcgtacccgg cagatgctgc tgcagcagtt gcgtgcgcga ccgtcgcagg tttcgatcaa
     1681 cgacggcaga cggcaattgg cggcgctcga tgccgccatc gagaccatcg aatccgaatt
     1741 tcagcaaacg agcgctagcg gcggcgtacc gaaggaagga taccggcaag cccgtcgagc
     1801 ccgcttagcg accgaaccgg cagacaaggc cggtggcggg atagcggcct ggatctcggc
     1861 caggcccata tattcagtcg ttctcgccgt cgcggtcgcc acggccatag cgggggcctg
     1921 cgctttgtgg actgcacggc agccgcaaaa tagccctgcg ccggtggcca agaacgaagc
     1981 gcggacgggc accccggtat tccgcgggag gcgtcggttg agggcagcgt cactacccga
     2041 aggcgagctt gcgcctggcg tcgacggcgg ctcgagcgat gccgaggtgt cgtacgtgtt
     2101 tcggcggcag ccggtctttt accgcacgac ccacccggtc gggaccatca tcatcgacaa
     2161 gccacagcac ttcctctacc tcattcaacc gaaatccgtc gcgttgcgct acggcatcgc
     2221 tgtcggcagc caatgcaccg atctcgccgg gctgcgacgc atttccaaca aggccgagtg
     2281 gccggcgtgg cagcctacgc cggaactggt cgcccgcagg ctcgctccgg ccggagtcat
     2341 gcccggcggt cccggcaacc cgctcggtgc gcgccttctc gcgctcgaag acggaaattc
     2401 aatccacggc accaacgccc cgaaggcgat cggcaatccc gcggtgtttg gttgcatccg
     2461 cctggtcaac gacgacgtcg tcgatctgta tcagcgcgtg ccggtcggcg gacgcgtggt
     2521 cgtgaccaat tagccgtcac cagccttcct cgtgatccga gttcgcggg
//
LOCUS       DATMQB010000282         2497 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_410989, whole genome shotgun sequence.
ACCESSION   DATMQB010000282 DATMQB010000000
VERSION     DATMQB010000282.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2497
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_410989"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..282
                     /locus_tag="VNY79_08265"
     CDS             <1..282
                     /locus_tag="VNY79_08265"
                     /inference="COORDINATES: protein motif:HMM:NF014794.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent enzyme"
                     /protein_id="HWX72478.1"
                     /translation="HDHIAVVFVILNNTSYRILKQRLRAQHGAAAQVDRYVGMELVDP
                     PIDYVGLARSLGVAAERATTVHEATDLVARGLKSGAPLLIDVPIDRALR"
     gene            complement(400..948)
                     /locus_tag="VNY79_08270"
     CDS             complement(400..948)
                     /locus_tag="VNY79_08270"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72479.1"
                     /translation="MPPVLRLCEDALSDGAALSLPARPRLAFVVHGSIAAGDRVLRDG
                     EAWSGEDAATFKAGGEGATVWRWELGAAETGGVVAGTGTGIASREKLAARLDTLPQGP
                     LLLRGDSVAFPPGGCAYLHRHQGPGIRCLIEGGIRIDTHGRSTAYGPGGAWYENGPEP
                     VFAQAAADRPTRFIRVMVLPAA"
     gene            1101..2204
                     /locus_tag="VNY79_08275"
     CDS             1101..2204
                     /locus_tag="VNY79_08275"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HWX72480.1"
                     /translation="MQREAPPFRADHVGSLLRPAALKEARAKHERREITAGALRAVED
                     REIEKAIGKQEEVGLKLATDGELRRSWWQFDFLKGLDGVELYQVGDGIVFHGVKTKPE
                     SVRVTGRVGFSAHPHIDDFRFVKEHARVMPKMTVPAPNVLHFRQGRRAISKDAYPDLD
                     AFFDDVADAYRQALRAFYDAGCRYLQLDDTTWSMMCDERELAHSRERGDAPEKLPAAY
                     ARMINRALAGKPADMTVTMHSCRGNFRSTWIAEGGYEPMAETLFNEVEIDGYFLEYDS
                     DRAGGFEPLRFFPKGKKQLVLGLVTSKSGTLEKKDEIKRRIEEATRYVALDQLCLSPQ
                     CGFASTEEGNVLSEEEQWAKLRMIVELADEVWR"
     gene            2284..>2497
                     /locus_tag="VNY79_08280"
     CDS             2284..>2497
                     /locus_tag="VNY79_08280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HWX72481.1"
                     /translation="MQRTQPPFRADHVGSLLRPGALKKARERRANGEIAADALKEVED
                     REIGAIIAKQEEAGLQSITDGEFRRSW"
BASE COUNT          437 a          855 c          832 g          373 t
ORIGIN      
        1 cacgaccaca tcgccgtcgt cttcgtcatc ctcaacaaca cgtcctatcg catcctcaag
       61 cagcgcctgc gtgcccagca cggcgccgcc gcgcaggtcg accgctatgt cggcatggag
      121 ctcgtcgatc cgccgatcga ctacgtcggc ctcgcacgct cgctcggcgt agcggccgag
      181 cgcgccacca ccgtgcacga ggccaccgat ctcgttgcgc gcggactaaa gagcggggcg
      241 ccgctgctga tcgatgtgcc gatcgaccgc gccttgcgat gagcaatctc agcgcccggt
      301 cgcaagccgc agcggcatgt cggcgaagat cttgtactgc tggctcttcg gcttcccctt
      361 gtcttcggca ttgagatatt cgagcgagct tttgccgagt caagccgccg gcaggaccat
      421 gacgcggatg aagcgggtcg gccgatcggc ggcggcctgg gcgaacaccg gctccggccc
      481 gttctcgtac caggcgccgc ccggcccgta ggcggtcgag cggccgtggg tgtcgatgcg
      541 gatgccgcct tcgatcaggc agcggatgcc cggcccctga tgccgatgca gataggcaca
      601 gccgcccggc gggaacgcga cgctgtcgcc gcggaggagc agcggccctt gcggcagggt
      661 gtcgagacgc gctgcaagct tttcgcggga ggcgatgccc gtgccggtgc cggcgacgac
      721 gccgccggtc tcggctgccc ccagctccca gcgccagacg gtcgcgccct cgccgcccgc
      781 tttgaacgtc gccgcatctt cgccgctcca ggcctcgccg tcgcgcaaca cgcgatcgcc
      841 ggcggcgatc gagccgtgca ccacgaacgc caagcgcggc cgcgccggca gcgacaatgc
      901 ggcgccgtct gagagcgcgt cttcacagag ccgtagtacc ggcggcatag gcttctcctt
      961 tcgcgcggcg cgcaccggcc gattgtccgc atggatacgc gctggcgcaa cgggatttac
     1021 acgccgtgtc ggccgttgct aaatcgcggc cgagacgaag caagaataac tgccgcgaag
     1081 cacggcggat gggaggaacg atgcagcggg aggcgccgcc attccgcgcc gaccacgtcg
     1141 gcagcctgct gcggccggcg gcgctcaagg aggcgcgggc gaagcacgag cgccgcgaga
     1201 tcaccgccgg cgcgctgcgc gcggtcgagg accgcgagat cgagaaggcg atcggaaagc
     1261 aggaggaggt tgggctcaag ctcgccaccg acggcgagct gcgccgctcc tggtggcagt
     1321 tcgatttcct caagggactc gacggcgtcg agctctatca ggtcggcgac ggcatcgtct
     1381 tccacggcgt caagaccaag cccgagagcg tgcgcgtgac cggccgcgtc ggcttctccg
     1441 cacatccgca catcgacgat ttccgcttcg tcaaggagca cgcgcgggtg atgccgaaaa
     1501 tgaccgtgcc ggcgcccaat gtgctgcatt tccgccaggg ccgccgcgcg atcagcaagg
     1561 acgcctatcc cgatctcgac gcttttttcg atgacgtggc cgacgcctac cgccaggcgc
     1621 tgcgcgcgtt ctacgacgcc ggctgccgct atctgcagct cgacgacacc acctggtcga
     1681 tgatgtgcga cgagcgcgag cttgcgcatt cgcgcgagcg tggcgatgcg ccggaaaagc
     1741 tgccggccgc ttatgcgcgc atgatcaatc gcgccctcgc cggcaagccc gcggacatga
     1801 cggtcaccat gcattcgtgc cgcggcaatt tccgctccac ctggatcgcg gagggcggct
     1861 acgagcccat ggccgagacg ctgttcaacg aagtcgagat cgacggctac ttcctcgaat
     1921 acgactccga ccgcgccggc ggtttcgagc cgctgcggtt ctttcccaaa ggcaagaagc
     1981 agctcgtgct cggcctcgtc acctcgaaga gcggcacgct ggagaagaag gacgagatca
     2041 agcgccgcat cgaggaggcg acgcgatacg tcgctctcga ccagctctgc ctgtcgccgc
     2101 aatgcggctt cgcctccacc gaggaaggca acgttttgtc ggaggaggag cagtgggcga
     2161 agctgcgcat gatcgtcgaa ttggccgacg aggtttggcg atgacagtcg ccgcttgcgc
     2221 ccgccgcgac ccctgctgag agacgacgac ggcaagcgga agaggaaaca ggaaagaaaa
     2281 ggaatgcaac gcacccaacc gccgttccgc gccgatcatg tcggcagcct cttgcgtccc
     2341 ggcgccttga agaaagcgcg cgagcgccgc gccaacggcg agatcgccgc cgatgcgctg
     2401 aaggaagtgg aagaccgcga gatcggcgcg atcatcgcca agcaggagga ggccggcctg
     2461 caatccatca ccgacggcga gttccgccgc tcctggt
//
LOCUS       DATMQB010000283         2247 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1047984, whole genome shotgun sequence.
ACCESSION   DATMQB010000283 DATMQB010000000
VERSION     DATMQB010000283.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2247)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2247)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2247
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1047984"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..256
                     /locus_tag="VNY79_08285"
     CDS             <1..256
                     /locus_tag="VNY79_08285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72482.1"
                     /translation="ADIPVEHRPNPIRRQVLALPDQQSLWGDRWGDRSGDRWGGPGRN
                     GGYNDGGQGFFPRLFGGSFAGPPPAPVPRNRAAARRMEIR"
     gene            748..2220
                     /locus_tag="VNY79_08290"
     CDS             748..2220
                     /locus_tag="VNY79_08290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015930681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009279 - cell outer membrane [Evidence
                     IEA];
                     GO_function: GO:0015288 - porin activity [Evidence IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux transporter outer membrane subunit"
                     /protein_id="HWX72483.1"
                     /translation="MALIFALSLAGCSVGPDYFPEAAPTPTKYKEIKGWKLATPRDWV
                     DRGDWWSFYRDPKLAFLLKQVEISNQTVAAAAASYEQARALIREAQAALFPTVTASYT
                     YTRTRTGPKAAGFGASGAGGGPGFNGGAIYTTTFVPQFSGTWDIDVWGKVRRQIESNT
                     SAAQTSAADLDNAKLSAQGALATAYFNLRAADSLRDLLVHYTEEYKKTLKIVRDQFNA
                     GFSVTEGDVATAEAQVFTTEAQAINVGVQRAQFEHSIAMLIGRPPAELSIARHLLGGN
                     IPRIPVSVPSTLLERRPDIAAAERTMQEQNALIGVAVAGYFPDISLTGMLQWIGRNPL
                     PFNVAHEVWSLGAAGAQVLFNGGLVSAQVDSARAAYWQSVANYRQTVLTAFQQVEDEL
                     IAVRLLRQQLVLQEKAVKDQRRAVDVFINQFRAGTVAYTTVVTAEILLLTDEENLLTT
                     RQNLFLASVALIQALGGGWDTNLLPTQKELVKDFSLLPQL"
BASE COUNT          395 a          738 c          711 g          403 t
ORIGIN      
        1 cgcggacatt ccggtcgagc acaggccgaa cccgattcgc cgccaggttc ttgcattgcc
       61 cgaccagcag tcactgtggg gtgaccgctg gggcgatcga tccggcgacc gatggggcgg
      121 cccgggacgg aacggaggct acaacgacgg cggtcagggc ttcttcccgc gcttgttcgg
      181 cggctcgttc gccggcccgc cgccggcgcc agtcccgcgc aaccgcgccg ctgcacgcag
      241 gatggagatc cgctagcacc ggcaagcagt ttcggcgcag cgcctcagat cgcggcgatt
      301 cctgcgaagg tttctgtctc atggactatt tccgcttgct gcggcccgac ttgcgtgtcg
      361 ctgccgctat tcgcttgcgc gttgaagcgg ttgcgggcgc ggcgcaataa agcggtgccg
      421 cgcgcatagt gtcgcccaaa cagcacatcg tcggatgaaa cgggcgtcgc ggcgcagcaa
      481 cacgggcgcg gcgttgatat tcgccaagcc gtggggcatg gtcatggtta acgcgattgc
      541 tgggggcggg gtcgcagcga acacggcaac gtcatccgat cagcgctggg cgcacgctgc
      601 agcgaggctt gacccgcatc cttgcggcgc ggggtaatgt acagcgacga gttttcggca
      661 gtggttgcgt cgacccacgc tggttttgct cgcattacac gggcgcgacg cggtgcgctt
      721 tcgcgcccgc agtcctcgtc cgccgtcatg gcactaattt ttgctttgtc gcttgccggc
      781 tgcagcgtcg gccccgacta ttttcccgaa gccgcgccga cgccgaccaa gtacaaggag
      841 atcaaaggct ggaaattggc cacgccgcgc gactgggtcg accgcggcga ttggtggagc
      901 ttctatcgcg atcccaagct cgctttcctg ctcaagcagg tggaaatctc gaaccagacg
      961 gtggccgccg cggctgccag ctatgagcag gcgcgcgccc tcatccgcga ggcgcaagcg
     1021 gcgctgtttc caacggtgac ggcgagttac acctacaccc gcacgcgcac cgggccaaag
     1081 gccgccggct tcggagcctc gggcgcgggc ggaggccccg gcttcaacgg cggcgccatc
     1141 tacacgacaa ccttcgtgcc gcagttttcc ggcacctggg acatcgatgt ctggggcaag
     1201 gtgcgccgcc agatcgaaag caatacgtct gccgcccaaa ccagcgccgc cgatctcgac
     1261 aatgccaagc tctcggcaca gggggcgctc gccaccgcct atttcaattt gcgcgcggcg
     1321 gattccctgc gcgacctcct tgtgcactac acggaggaat acaagaaaac gctcaagatc
     1381 gtgcgcgatc agttcaacgc cggcttttcc gtcaccgaag gcgacgtcgc tacggccgaa
     1441 gcgcaggtct tcacgaccga ggcgcaggcc atcaacgtcg gcgtgcagcg cgcgcagttc
     1501 gagcactcga tcgcgatgtt gatcggccgc ccgcccgcgg agctgtcgat cgcccggcac
     1561 ttgctcggcg gcaatattcc acgaatcccg gtctcggttc cctcgacgct gctcgagcgg
     1621 cgcccggaca tcgccgcggc ggaacgaaca atgcaggagc aaaacgcgct gatcggcgtc
     1681 gccgtggccg gctatttccc ggacatttcc ctgaccggca tgctgcagtg gatcggccgg
     1741 aatcccttgc cgttcaatgt cgcccatgaa gtgtggtcgc tcggcgcggc cggcgcgcaa
     1801 gtcctgttca acggcggtct ggtctccgcg caggtcgatt ccgctcgcgc cgcctattgg
     1861 cagagcgtag ccaactaccg gcagacggtg ctcaccgctt tccagcaggt cgaggatgag
     1921 ctgatcgccg ttcgcctgct caggcagcag cttgttcttc aggaaaaagc tgtcaaagac
     1981 cagcgccggg cggtcgatgt cttcatcaac cagttcaggg cgggcaccgt ggcctatacc
     2041 acggtcgtca cggctgaaat tttgctgttg accgacgagg aaaacttgct gaccacccgc
     2101 cagaacctgt ttttggcgag cgtcgctctg attcaggcgc tcggcggggg ctgggacacc
     2161 aacctcttac ccacgcaaaa agagctggtg aaagatttct cgctgctgcc gcaactctag
     2221 ccgaaagtcg taaccgcgaa agcatac
//
LOCUS       DATMQB010000284         4729 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2904786, whole genome shotgun sequence.
ACCESSION   DATMQB010000284 DATMQB010000000
VERSION     DATMQB010000284.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4729)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4729)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4729
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2904786"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..345)
                     /locus_tag="VNY79_08295"
     CDS             complement(<1..345)
                     /locus_tag="VNY79_08295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019965773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX72484.1"
                     /translation="MIPNSLPGLDFGLGNDIDMLRDTVSAFSREKIAPCAAEIDRSNK
                     FPRELWPQLGALGLLGVTVEEEWGGAGMGYLAHCVAMEEISRGSAAIGLSYGAHSNLC
                     VNQIRRNASAEQK"
     gene            complement(414..1640)
                     /locus_tag="VNY79_08300"
     CDS             complement(414..1640)
                     /locus_tag="VNY79_08300"
                     /EC_number="2.7.7.65"
                     /EC_number="3.1.4.52"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0052621 - diguanylate cyclase activity
                     [Evidence IEA];
                     GO_function: GO:0071111 - cyclic-guanylate-specific
                     phosphodiesterase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional diguanylate
                     cyclase/phosphodiesterase"
                     /protein_id="HWX72485.1"
                     /translation="MAGRRARTVVLALIDLDAFREINEALGREGGDAVLVQIAWHLKA
                     GVPAEALFGRFEDDAFAVLMTCDDARGADTFAASLRAVLSGPILVDRASRLSATVGLA
                     QAPDDGTTAEELARRAGLALRAAKREGRGVMRRFEPAIEREHAERRFIRRELESAISG
                     GAFDVHYRPILAADGGGIVGAEALLRWTHPVRGPIAPSLFIPLAEQNGLMSRLGEFVL
                     RQAMSDGSRWPSLFVAVNLSPLQIRDAGFVDLVGAVMAETGIAASRVVLEVTEGVLID
                     DPRQAQARLEALRALGVRIALDDFGTGYSSLSYLQKFPFDRLKIDRAFVASLGTSGNS
                     GAIIQSIVTLGHALGMKVLGEGVEADEQRVLLRLAGCDELQGHLFAVPAPAAEIDRAR
                     ARLARPAKRPAVASAR"
     gene            1657..2295
                     /locus_tag="VNY79_08305"
     CDS             1657..2295
                     /locus_tag="VNY79_08305"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72486.1"
                     /translation="MVGQRGQRVLVGQSANGLDAASEQAAEAVSRVRGDKGAAGQRGA
                     GQTGQHPELIHDAREGAVRRPTEPADYASVSIVQRLRLAIGGRRRIGCEAQILEAGGA
                     LDEPKLAVPEAVAFAEYRMNLVDGEPQRRVPLAAQAAIVQADDDKGRCGANDDRRTQD
                     RQQQRGDTRSCGDRQGFRLVRAPPLSSPTFPGCRCGHTHAPHHPAGSLTAHA"
     gene            2465..3841
                     /locus_tag="VNY79_08310"
     CDS             2465..3841
                     /locus_tag="VNY79_08310"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HWX72487.1"
                     /translation="MRHLRGLILAVCGMAAGALVSMAPAQGQDCPGNPNALGTSRVLA
                     VESGEYGGFGVMQYPETVPLRDKEVVLTFDDGPLPPYSEQVLDILAAQCVKATYFLVG
                     SMAHAYPATVRRMHATGHTIGTHSQDHPSRFQSLPREKLQHEIDDGIAAVSAALGDPK
                     EVAPFFRVPGLAQSEAIEKELAARSLIVFSSDTVADDWFHRIKASEIVHRAMSRLEAR
                     GKGILLLHDIHPATVAALPELLKQLKERGFHIVHVVPAPAAAPVEMAGAPLTLTAAWA
                     ERQDDPVWPEVVVTDPATELAVLPAPDTSSFDVGFKPAPRARIMLADGSAGAIPGAAG
                     TQWPDGTAVALPSLEVKLPALRKHDFAVWREERPTASAPTRPRHVQAATHHERERART
                     VAKPNRYPHKPAIAAAQQMRAPSQKAAAQHARGQSQKSVTPTRKAPTRVDHAYRMERS
                     RHQVACCS"
     gene            4196..>4729
                     /locus_tag="VNY79_08315"
     CDS             4196..>4729
                     /locus_tag="VNY79_08315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011088939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX72488.1"
                     /translation="MTSFNRSPREPQCRQRASRSAPRTLVWLLVLLIAATVFAAAQAC
                     AAEHLRIAAQKTGTLAWELDIIRAAGLDRQHDLTIETTELASTEAGKIALKGGSADLI
                     VTDWLWVGRERALGDNLVFYPYSSALGAVMAPANSNIRGIADLVGKKIGVAGGPLDKS
                     WLLLRALARRSGVDLKTQ"
BASE COUNT          824 a         1617 c         1594 g          694 t
ORIGIN      
        1 cttctgctcg gcgctggcgt tgcgcctgat ctggttgacg cagagattgg aatgcgcgcc
       61 gtaggaaagg ccgatcgccg ccgagccgcg ggaaatctcc tccatcgcca cgcaatgggc
      121 gagatagccc atgccggcgc cgccccattc ctcctcgacc gtgacgccga gcaggccgag
      181 agccccgagc tgcggccaca gctcgcgcgg aaatttgttg gagcggtcga tctcggcggc
      241 gcacggcgca attttttcgc gggagaaggc gctgaccgtg tcgcgcagca tatcgatgtc
      301 gttgccgagg ccgaaatcta ggcccggaag gctgttcggg atcatcgcgc gctccttccc
      361 gcgcctaaaa ccggcgggat acccgtgata gatagcgagt ggaatagcgc ctgtcagcgc
      421 gcggacgcga ccgccggccg cttcgccgga cgcgccagcc gggcccgcgc ccggtcgatc
      481 tccgcggccg gcgcgggcac ggcgaacaaa tggccctgca actcgtcgca gccggcgagc
      541 cgcagaagca cccgctgctc gtcggcctcg accccctccc ccagcacctt catgccgagc
      601 gcatggccga gcgtgacgat cgactggatg atggcgccgg aattgcccga ggtgccgagc
      661 gaagcaacga aggcgcggtc gatcttgagc cggtcgaagg gaaatttctg caggtagctg
      721 aggctcgaat agccggtgcc gaaatcgtca agcgcgatgc gcacgccgag cgcgcgcagg
      781 gcctcgagcc gcgcctgcgc ctgccgcgga tcgtcgatga gaacgccttc ggtcacttcg
      841 aggacgacac gcgaggcggc gatgccggtc tcggccatga ccgcgccgac aagatcgacg
      901 aagccggcat cgcggatctg cagcggcgag aggttgaccg cgacgaacag actgggccaa
      961 cgcgagccat ccgacatcgc ctggcgcagc acgaattcgc cgagccggga catcaacccg
     1021 ttctgctcgg ccagaggaat gaagagcgac ggcgcaatcg ggccgcgcac gggatgggtc
     1081 cagcgcagca acgcttcggc gccgacgatg ccgccgccgt cggcggcgag gatcggccga
     1141 tagtgaacgt caaaggcgcc gccggagatg gcggattcga gctcgcgccg gatgaaccgc
     1201 cgctcggcgt gttcgcgctc gatcgccggc tcgaagcgcc gcatcacgcc ccggccttcg
     1261 cgcttggcgg cacgcagcgc aagcccggcg cggcgggcca gttcctccgc cgtcgtgccg
     1321 tcgtcaggcg cctgcgcgag gccgacggtt gcgctgagcc gcgacgcgcg gtcgacgagg
     1381 atcggacctg agagcaccgc gcgcagcgaa gcagcgaacg tgtccgcgcc tcgggcgtca
     1441 tcgcaggtca tgaggaccgc gaacgcgtcg tcctcgaagc gtccgaacag cgcctcagcc
     1501 ggcacgcccg ctttcaggtg ccaggcgatt tggacgagca cggcgtcgcc gccctcccgc
     1561 ccgagcgcct cgttgatctc gcggaacgcg tcgagatcga tcaatgcaag aacgaccgtc
     1621 cgggcgcgac ggcccgccag cgcgtcttcg aggcgcgtgg ttgggcagcg cggtcagcgc
     1681 gtcctcgtcg gtcaatcggc gaacggtctc gatgctgcga gcgagcaagc ggccgaggcg
     1741 gtgtcccgcg tgcgtggcga caaaggcgca gccggccagc gcggcgccgg ccaaaccggc
     1801 cagcacccag agcttattca tgatgcgcgc gagggcgcgg tccggcgccc aactgaacca
     1861 gccgactatg cgtccgtctc gatcgtgcag cgactgcgcc tcgcgatcgg cggtcgtcgg
     1921 cggatcggtt gcgaagcgca gatccttgag gccggcgggg cgctcgatga gccgaagctt
     1981 gccgtccccg aagcggtcgc cttcgccgaa taccgcatga acctcgtcga tggcgagccg
     2041 cagcgccgcg tgccactcgc tgctcaggcg gcgatcgtcc aagccgacga cgacaagggc
     2101 cgctgcggcg caaacgatga tcgccgcact caggaccggc agcagcaacg aggcgatacg
     2161 cgcagttgcg gtgaccgcca aggttttcgg ctcgtgcggg ctccgcccct gtccagcccc
     2221 acctttccgg gctgccgttg cggccatacc cacgctcccc accacccggc ggggagccta
     2281 accgcgcatg cttaacgaga agaaaaggcc gggcgaaagc tcaagttgct tgcacgaatt
     2341 tatcaacaga ccaaccgccg ccagttaacg gttagggtga cattaaactc aatagaccgt
     2401 aatctccggc agggtgtggg ggcggttccg gcgatggcaa atcgaccggg accgggcacg
     2461 gggcatgcgt cacctacggg ggctgattct cgctgtctgc ggcatggctg ccggagcgct
     2521 tgtgtcgatg gcgcccgcgc agggccagga ttgcccgggg aatcccaacg cgcttggaac
     2581 gagccgcgtg ctcgccgtcg agtccggcga gtacgggggc tttggcgtga tgcaataccc
     2641 cgagaccgtg ccgttgcgcg acaaggaggt cgtgctcacc ttcgacgatg gcccgctgcc
     2701 gccctacagc gagcaggtcc tcgatattct cgccgcacaa tgcgtcaagg cgacgtattt
     2761 cctcgtcggc tccatggccc acgcatatcc cgcgacggtg cgccggatgc acgccaccgg
     2821 gcacacgatc ggcacgcaca gccaggatca tccctcccgc ttccaaagcc tcccgcgcga
     2881 gaagctccag cacgagatcg acgacggcat tgccgccgta agcgccgcgc ttggcgaccc
     2941 caaggaagtg gcgccattct ttcgcgtccc cggcttggcg caatcggaag cgatcgagaa
     3001 ggagcttgcc gcgcggtcgc tcatcgtctt cagctccgac acggtagccg acgactggtt
     3061 ccaccgcatc aaggcgagcg agatcgtcca ccgcgccatg agccggctcg aagcgcgcgg
     3121 caagggaatc ctgttgctgc acgacattca tccggcaact gtcgcggcat tgccggaact
     3181 gctgaagcag ctcaaggagc gaggcttcca tatcgtgcac gtggtgccgg cccccgcggc
     3241 ggcccccgtc gagatggccg gcgcgccgct gacattgacc gcagcgtggg ccgagcgcca
     3301 agacgatccg gtctggccgg aggtcgtcgt gaccgacccg gcgacagagc ttgccgtgct
     3361 gcccgcgccc gacacgtcat cgttcgatgt cggcttcaag cccgcgcccc gggcgcgcat
     3421 catgcttgcc gatggctcag cgggagcaat tccgggggcc gccggcacgc agtggcctga
     3481 cgggacggcc gtcgccctgc cctctctcga agtgaaattg ccggcgctgc gcaaacacga
     3541 cttcgcggtc tggcgcgagg aaaggccgac tgcgagcgcg ccgacgcgac cgcggcatgt
     3601 ccaggcggcg acccatcacg agcgtgaacg cgctcgcacg gtcgcgaaac ccaaccgtta
     3661 tccgcacaag cctgccatcg ccgctgcgca gcaaatgagg gccccgagcc aaaaagcagc
     3721 tgcccagcac gcgaggggtc agagccagaa atccgtgacg ccaacccgca aggcgccgac
     3781 gcgtgtcgat cacgcctacc gcatggagcg atcacgacat caggtcgcct gctgtagttg
     3841 acctggtaaa tcgcacaggc gaagccatcc gcagccagcc gtgagccgtc aggcgcgtgc
     3901 agcacgtcgt tgcgctggcc gctttgctgc cgccaaatgg aaactaaggc gggcgggcac
     3961 gatccgccgc agcatcggcg gtgcgcgccg ctgtcgcgcc ccgatatcga ccctcgcgat
     4021 tgacgcccgt gcggtaacca taggatattg tcctgcccgc aggcgggcac ttttggcaag
     4081 cgggatcagc ggcatagatg cgcggcctgg gggcggaaat cgagattttg gcggatgacc
     4141 tcacggtcct gccgcgcact ttccgcaagc tcggcatgag ccggcgtgcg gcccgatgac
     4201 cagcttcaat cgctcgccgc gcgagccgca atgtcgtcaa cgcgccagca gatcggctcc
     4261 gcgcacgctc gtgtggctgc tggttctgct gatcgcggcg acggtgttcg cggcggcgca
     4321 ggcctgtgcg gccgagcacc tgcgcatcgc cgcgcagaag accggaacgc tcgcctggga
     4381 gctcgacatc attcgcgccg caggcctcga ccggcagcat gatctcacga tcgagacgac
     4441 cgagcttgcc agcaccgagg ccggcaagat cgcgctcaaa ggcggctcgg ccgacctgat
     4501 tgtcaccgac tggctgtggg tcgggcgcga gcgtgcgctg ggcgacaacc tcgtcttcta
     4561 tccgtattcg agcgcgctcg gcgcggtaat ggcgccggcg aattcgaaca tcagaggcat
     4621 cgccgacctc gtcggcaaga agattggcgt cgccggcggg ccgctcgaca agagttggct
     4681 gctgctgcgg gctctggcgc ggcgatcggg cgtcgatctg aaaacgcag
//
LOCUS       DATMQB010000285         3223 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4133030, whole genome shotgun sequence.
ACCESSION   DATMQB010000285 DATMQB010000000
VERSION     DATMQB010000285.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3223
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4133030"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..226)
                     /locus_tag="VNY79_08320"
     CDS             complement(<1..226)
                     /locus_tag="VNY79_08320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015932875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HWX72489.1"
                     /translation="MAVVLDTVMGIAARPRHPEKAHRPDQPLLRKPDWIRVKAPVSAG
                     YVETQRIVRANGLHTVCEEAGCPNIGECWEK"
     gene            complement(451..1872)
                     /gene="lpdA"
                     /locus_tag="VNY79_08325"
     CDS             complement(451..1872)
                     /gene="lpdA"
                     /locus_tag="VNY79_08325"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004148 - dihydrolipoyl dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA];
                     GO_process: GO:0045454 - cell redox homeostasis [Evidence
                     IEA];
                     GO_process: GO:0051068 - dihydrolipoamide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HWX72490.1"
                     /translation="MPDSSFDIIIIGSGPGGYVTAIRAAQLGFKTTIVERDYLGGICL
                     NWGCIPTKALLRSAEILHYLQHAKDYGLSVEKVGYDPAAVVKRSRAVAKRLNDGVGFL
                     MKKNKVPVIWGEAVIDAPGKITVKTGKSEAPKGALGAGSYQAKHIILATGARPRVLPG
                     LEPDRKLIWTYFEAMVPERIPQSLLVVGSGAIGIEFASFYRTLGAEVTVVEVLPQILP
                     AEDAEIAAFARKSFEKQGIKIFTGAKVTKLDRKADGVSATIDDGKGGTQTLSAERVIS
                     AVGVVGNIENLGLEKLGVKTERGAIVVDALNRTSVPGIYAIGDVAGPPLLAHKAEHEG
                     VICVEAIKGLNPHPMDRRLIPGCTYCSPQIASVGLTEQAAKEQKLDIRVGRFPFIGNG
                     KAIALGEDQGLVKVIFDKKTGALIGAHMVGAEVTELIQGYVIAMNLETTEEELMHTVF
                     PHPTLSEMMKEAVLDAYGRVLNI"
     gene            complement(1879..>3223)
                     /locus_tag="VNY79_08330"
     CDS             complement(1879..>3223)
                     /locus_tag="VNY79_08330"
                     /EC_number="2.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045254 - pyruvate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0004738 - pyruvate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0004742 - dihydrolipoyllysine-residue
                     acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0006086 - acetyl-CoA biosynthetic process
                     from pyruvate [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="pyruvate dehydrogenase complex dihydrolipoamide
                     acetyltransferase"
                     /protein_id="HWX72491.1"
                     /translation="ETDKATMEYEAVDDGVMAKIVVPEGAQDVPVHQLIAVMAQEGED
                     PKAAAAAAGAPGGQGTPAVTTPSGETPSPPPKGAEVGPQAAPPSMVAQARPPEEKSSP
                     PPPAARAPSPQRGEGGGEGARPDGHGANRVFSSPLARRLAKDAGVDIGRIAGSGPHGR
                     VIARDVAAAKEGKGLKAPAAAAAPAPAAAAGSPPMAQIAQTPSDEKIRALFGPGSYEV
                     IPHDNIRRIIAQRLTLAKQTIPHFYMTIDCAIGKLLTAREEINAAAPKDKDGKPVWKI
                     SVNDFVIKALAVALMHVPDANVTWTEGGLLKHKHADVGVAVAITGGLITPIVRQADTK
                     SLSAISNEMKDYAARARARKLKPEEYQGGTTAVSNLGMYGIKEFYAVINPPHATILSV
                     GAGEERPVARNGKIEAAQMMTVGLATDHRAVDGALGAELLRAFKGLIENPVMMVV"
BASE COUNT          475 a         1058 c         1067 g          623 t
ORIGIN      
        1 tcttctccca gcactcgccg atattgggac agccggcctc ctcgcatacg gtgtgcaggc
       61 cgttggcgcg cacgatgcgc tgcgtctcga catagcccgc cgacaccggc gccttgactc
      121 tgatccagtc cggcttgcgc aacagcggct ggtccggccg gtgcgccttt tccgggtgac
      181 gcggccgggc ggcaatgccc atcacagtgt cgagtacgac ggccatgaag gttccgggag
      241 gttgagtctc tttctcgcct gatacttacg gggcgcgatg ctgtgccgca aggcgtcagc
      301 ggccggtgcc gtatgacggt ctcgccagtc tgagccgctc gtccccgcga aagcggggat
      361 ccattgattt catcgcgatg tcggcacgct ccgcgtggtt tccgcttacg tgggaaggag
      421 cggaacgtga gctaactcga tcgattttgt ttagatattg agcacacgcc cgtaggcgtc
      481 aagcaccgct tccttcatca tctccgagag cgtcggatgc gggaagacgg tgtgcataag
      541 ctcctcttcc gtcgtctcaa ggttcatcgc aatcacgtaa ccctggatca gctcggtgac
      601 ctccgcaccc accatgtgcg cgccgatgag cgcgccggtc ttcttgtcga agatcacctt
      661 gacgagaccc tggtcctcgc cgagcgcgat cgccttgccg ttgccgatga agggaaagcg
      721 gccgacgcgg atgtcgagct tctgctcctt cgccgcctgt tcggtgagcc cgaccgaggc
      781 gatctgcggc gagcaatagg tgcagccggg aatgaggcgc cggtccatcg ggtgcggatt
      841 gagccccttg atggcttcga cgcagatgac gccctcgtgc tcggccttgt gggcgagaag
      901 cggcggcccg gcgacatcgc cgatggcgta gatcccaggc acgctggtcc tgttgagcgc
      961 atcgaccacg atcgcgccgc gctcggtctt cacgccgagc ttttccaggc cgagattctc
     1021 gatgttgccg acgacgccga cggcggagat gacgcgctcg gctgaaagcg tctgcgtacc
     1081 gcctttgccg tcgtcgatgg ttgcactgac gccgtcggcc ttcctgtcga gcttcgtcac
     1141 cttggcgccg gtgaagattt tgatgccctg tttctcgaaa ctcttgcgcg cgaaggcggc
     1201 tatctcggcg tcttccgccg gcaggatctg cggcagcact tcgacgaccg tgacctcggc
     1261 cccgagcgtg cggtagaacg aggcgaattc gatgccgatc gcgcccgagc cgacgacaag
     1321 cagcgactgc ggaatgcgct ccggcaccat ggcctcgaaa taggtccaga tgagcttcct
     1381 gtccggctcg agcccgggca ggacgcgcgg ccgcgcgccg gtcgcgagga tgatgtgctt
     1441 ggcctgatag gagccggcgc caagcgcccc tttcggagct tcgctcttac ccgtcttcac
     1501 cgtgatcttg ccgggcgcgt cgattaccgc ctcgccccag atcacgggga ccttgttctt
     1561 cttcatcagg aagccgacgc cgtcgttgag ccgcttggcg acggcgcgcg agcgcttcac
     1621 cacggccgcc ggatcgtagc cgaccttctc gaccgagagc ccgtagtcct tggcgtgctg
     1681 caggtagtga aggatctcgg ccgagcgcag cagcgccttg gtcgggatgc agccccagtt
     1741 gaggcagatg ccgccgagat agtcacgctc gacgatcgtg gtcttgaagc caagctgggc
     1801 ggcgcggatg gcggtgacgt agccgcccgg cccggagccg atgatgatga tgtcgaatga
     1861 cgagtcgggc atgaacgctc aaaccaccat catcaccggg ttctcgatca gccccttgaa
     1921 cgcccgcaag agctcggcgc cgagcgcgcc gtcgacggcg cggtgatcgg tcgcgagccc
     1981 caccgtcatc atctgcgccg cctcgatctt gccgttgcgc gcgaccgggc gctcctcgcc
     2041 ggcgccgacc gagagaatgg tcgcgtgcgg cgggttgatg acggcgtaaa actccttgat
     2101 gccgtacatg ccgaggttcg acaccgccgt ggtgccgccc tggtattcct ccggtttgag
     2161 ttttcgcgcg cgcgcgcgcg cggcgtagtc cttcatctcg ttggagatcg ccgacagcga
     2221 tttcgtgtcg gcctgccgca cgatcggcgt gatcaggccg ccggttatgg cgaccgcgac
     2281 gccaacgtcg gcgtgcttgt gcttgagcag accgccctcg gtccaggtga cattggcatc
     2341 gggcacgtgc atcagcgcga ccgccagcgc cttgatgacg aaatcgttga ccgagatttt
     2401 ccagacgggc tttccgtcct tgtccttcgg tgctgcggcg ttgatctctt cgcgcgcggt
     2461 caggagcttg ccgatagcgc aatcgatggt catgtagaaa tgcgggatcg tctgcttggc
     2521 gagcgtgagc cgctgcgcga tgatccggcg gatattgtcg tgggggatca cttcgtacga
     2581 gccgggccca aagagcgcgc ggattttctc gtccgagggc gtctgcgcga tctgcgccat
     2641 cggcggcgaa ccggcagcag ccgcgggagc gggtgcggcc gcggctgcag gggccttcag
     2701 gcccttgccc tccttcgccg cagcgacgtc gcgggcgatg acgcggccgt gcggacccga
     2761 gccagcgatg cgaccgatgt cgacgcccgc gtccttcgcg agccggcgtg cgagcggcga
     2821 ggagaagacg cggttggcgc cgtggccgtc aggccgagcc ccctcacccc caccctctcc
     2881 ccgctgggga gacggtgcgc gcgcagccgg cggcgggggc gaagattttt cctctggtgg
     2941 gcgtgcttgc gcgaccatcg atggtggggc cgcctgcggg ccaacttccg ctcctttcgg
     3001 cgggggcgag ggagtttcgc cgctcggcgt tgtcaccgcg ggagtgccct gccctcctgg
     3061 tgctcccgct gctgctgccg cagccttcgg atcttcgcct tcctgcgcca tcacggcgat
     3121 gagctgatgg accggaacat cctgggcgcc ttccggcacc acgatcttcg ccatcacgcc
     3181 gtcatcgacg gcttcgtatt ccatggtcgc cttgtcggtc tcg
//
LOCUS       DATMQB010000286         6771 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2905425, whole genome shotgun sequence.
ACCESSION   DATMQB010000286 DATMQB010000000
VERSION     DATMQB010000286.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6771)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6771)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6771
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2905425"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..216)
                     /locus_tag="VNY79_08335"
     CDS             complement(<1..216)
                     /locus_tag="VNY79_08335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013845470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HWX72492.1"
                     /translation="MLDVTKRQGAAPFDTARLDRLMDEAGIDVLLANSKPNVQYLLGG
                     HRSFFFDTMDAIGVSRYLPIVVYAKGAP"
     gene            639..1109
                     /locus_tag="VNY79_08340"
     CDS             639..1109
                     /locus_tag="VNY79_08340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HWX72493.1"
                     /translation="MRCKPFAGIALSAAVWVLTCGFPRAGELDPAALTYKLPSQIEWK
                     APFGPAAGIETAVLVGDPSKPGFYAVMVKWAPGNHFSRPHFHPHDRFITVLKGTWWVG
                     TGTKFDPDGTVAMPAGSFVVHYARGVHFDGAKDEEAVLLIVGDGPETPTPAETK"
     gene            complement(1140..2396)
                     /locus_tag="VNY79_08345"
     CDS             complement(1140..2396)
                     /locus_tag="VNY79_08345"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:TIGR00254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HWX72494.1"
                     /translation="MNLDVNTLFLVTIYVEAILGLLLLFAWVQNTAITAVAWWGFAHL
                     LRAGSIMLFGLYGSAPDLISIDLANSLLFTAFAVTWTGARVFDHHRPLPILLFGGAAL
                     WLVACRLPIVENAWDVRVLLSCGIIAAYTWATAYEFWRGRSEPLVSRWPAIFMLFADG
                     SLYLLRTPLGAMLPWLPTANQVFESVWMTVLSFEALLFTIAIAFILLAMAKERTEYRH
                     KTAALIDPLTGIANRRAFLEDGEAQLKRQATDPRPTAVMLLDLDNFKSINDRFGHAIG
                     DRVLGIFAEVASGCLRRIDLFGRLGGEEFAAVPFDTTSERALAVGEEIRTRFAAATRE
                     AEECPVVATVSVGIVISHDAVLDLSTLLAQADHALYRAKDNGRNRVEVASIELILDHA
                     RRGAADLIAAAAGAPASGKPAAKSAA"
     gene            2623..3660
                     /locus_tag="VNY79_08350"
     CDS             2623..3660
                     /locus_tag="VNY79_08350"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HWX72495.1"
                     /translation="MQFCNGIIEAIGNTPLIKLERVSAATGCTILGKAEFMNPGQSVK
                     DRAALFMIQDAVKRGELKPGGIVVEGTAGNTGIGLALVGNALGFRSVIVIPDTQSQEK
                     KDTLRLCGAELVEVPAVPYSNPNNYVKVSGRLAEQLAKTEPNGAVWANQFDNLANRQG
                     HLETTGPEIWRQTDGKIDGFSCAVGTGGTLAGVAIALKERNSAVRIALADPMGAALYS
                     YYTTGTLKSEGSSITEGIGQGRITKNIENAPIDVAYQIPDEEAVPIIFDLLEHEGLCL
                     GGSSGINIAGALRLANELGPGHTIVTILADCGTRYQSKLFNPEFLREKKLPVPPWLER
                     RSRIEVPYVRT"
     gene            3698..4570
                     /gene="sseA"
                     /locus_tag="VNY79_08355"
     CDS             3698..4570
                     /gene="sseA"
                     /locus_tag="VNY79_08355"
                     /EC_number="2.8.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004792 - thiosulfate sulfurtransferase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-mercaptopyruvate sulfurtransferase"
                     /protein_id="HWX72496.1"
                     /translation="MLRTDDSPAPPLPSRWLVSTAWLADHLRDRNLSVVDASSVPPGK
                     QGDAHADYRQGHIPGAVFFDINAISDHSTELPHMLPGPAQIGVAAGALGISETDTIVV
                     YDSAGLYSAARVWWTFRIFGAKDVFILDGGLPKWKAEGRPLENGDAARPAKKFQAEMN
                     VGAVAMLADVRMALTDDSAQIVDARPAERFSGKAAEPRPGLRSGHMPGSFSVPYSGLL
                     ENGRLVARERIASAFKEAGVDLDKPIITSCGSGVTAAILTFALDAIGKQAKGLYDGSW
                     AEWGSRPDLPVERG"
     gene            4577..5314
                     /locus_tag="VNY79_08360"
     CDS             4577..5314
                     /locus_tag="VNY79_08360"
                     /inference="COORDINATES: protein motif:HMM:NF024950.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX72497.1"
                     /translation="MPARAHPVALVTGGANGIGQAIVRRLTGNSWRVGLLDLPESGLH
                     RAFPRGMRHVALIEGDVGIEETAPRVVAAILERFGGLDALVSNAGIMIRKPLRRLTLA
                     EWHRVLDTNLTATFLLARAAEKPLRKAHGSIVTIASTRALMSEPDTESYSASKGGIVA
                     LTHALAVSLGPDIRVNCVSPGWIETKDQGALRRKDHAQHPAGRVGKPQDIAEIVFWLL
                     DRERSGFVTGANFVVDGGMTRKMIYVE"
     gene            complement(5346..>6771)
                     /locus_tag="VNY79_08365"
     CDS             complement(5346..>6771)
                     /locus_tag="VNY79_08365"
                     /inference="COORDINATES: protein motif:HMM:NF012933.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AlkA N-terminal domain-containing protein"
                     /protein_id="HWX72498.1"
                     /translation="YRAIVQRDARFDGRFFTGVKTTGIYCRPVCPARTPHSHNVVFFP
                     TAAAAQEAGFRPCLRCRPETAPDLGAWRGTSNSVSRALNLIELGALDEDDLDTLAGRL
                     GLGERQLRRLFRQHLGASPVAVAQTRRILLAKQLIHETRLPMAEIAFASGFGSVRRFN
                     ETFLALFGRPPSELRRVSGPDCPAGPQGEIVLLLRYHPPYDWAAMLEFLRRRAIAGVE
                     SVGADCYARAVELNGVHGTVAVQRGAGNALRATVRFPKLSALPTIIARLRRVFDLAAD
                     PVAITAHLAKDPALAPLVKARPGLRVAGAWDGFELAIRAVLGQQITVAAAATLAARLV
                     AAHGQRLATADAQLTLVFPSPAALACADLTSLGMPRSRAAALSAVAAAAVADPHLFDA
                     NCGLEDAVKRLRSIRGVGEWTAQYIALRQLREPDAFPAADIGLLRAIAGRERRRPSSS
                     ELLDRANAWRPWRAYAAQHLWASA"
BASE COUNT         1220 a         2223 c         2277 g         1051 t
ORIGIN      
        1 cggcgcgccc ttggcataga cgacaatcgg caggtagcgg ctgaccccga tcgcgtccat
       61 cgtgtcgaag aagaacgagc ggtggccgcc gaggaggtac tgcacattgg gcttggagtt
      121 ggcgagcagc acatcgatgc ctgcctcgtc catcaatcgg tcgagccgcg cggtatcgaa
      181 cggcgctgcg ccttggcgct tggtgacgtc aagcatgatc tgtctcctcg tggccttagt
      241 ctcaccctgt cggcaccgac cctaccaaat ccggcgacgc ggcggaaccc gcgcgcggtt
      301 cggcgtgctc ggcggggctt gcgttcgccg gagggggcgg gtggcggaaa tcggatcgat
      361 cgggagcggc tattgccggg cgatggctcg agcaggccgc tcgaggagca gcagatcggg
      421 cggctaggca acggcaaggg tgcgcacctc cacggcggca ggagaaaggt tgatcatgcg
      481 gtgtcttggc agcgaagtct tgccagcgat gtctgccggc ggggagccgg catgaagctc
      541 ttgccgctcg cgagaacaca acagcggcga cgtcactgtt ctgttaaaac ggcggcggaa
      601 acacctatgt cgaaataccg atgcaagagg agagcataat gcgttgcaag ccattcgccg
      661 ggatcgcgct gtctgccgcg gtatgggtcc tgacttgcgg gtttccgcgt gccggcgaac
      721 tcgatcccgc cgccttgacc tacaagctgc ccagtcagat cgaatggaag gcgccgtttg
      781 ggccagccgc cgggattgag accgcagtcc tggtcggcga tccgtcgaaa cccggattct
      841 atgcggttat ggtcaagtgg gccccgggca atcatttcag ccggccgcac ttccatcccc
      901 acgaccgctt catcaccgtg ctcaagggaa cgtggtgggt cggcaccggc acgaaattcg
      961 atcccgacgg cacggttgcg atgccggcgg ggagtttcgt ggtgcactat gcgcgcgggg
     1021 tacatttcga cggcgccaag gacgaggaag cggtcttgct gatcgtgggc gacggcccgg
     1081 agacgccgac acccgcggag acgaagtaag gggaaaccgc ccgagcggtc gacggccggt
     1141 caggccgcgg atttggctgc cggtttcccc gatgccggcg cgccggcggc ggcggcaatg
     1201 agatcggcag cgccacgcct ggcgtggtcg aggatcagtt cgatggaagc gacctcgacc
     1261 cggttgcggc cgttgtcctt ggcgcggtag agcgcatggt cggcctgcgc caagagcgtc
     1321 gagagatcga gcacggcgtc atggctgatc acgatcccga cgcttacggt ggcgacgacc
     1381 gggcactcct cggcttcgcg cgtcgccgcc gcaaaccgtg tgcggatctc ttccccgacg
     1441 gccaacgccc gctcgctcgt ggtgtcgaac ggcacggcgg cgaattcctc gccgcccagg
     1501 cggccgaaca ggtcgatgcg ccgcaggcag ccactcgcca cctcggcgaa aatccccagc
     1561 acacgatcgc cgatggcatg gccaaagcgg tcgttgatcg atttgaagtt gtcgaggtcg
     1621 agcagcatca ccgcggtcgg ccgcggatcg gttgcctggc gcttgagctg ggcttcgccg
     1681 tcctcaagga aggcgcggcg gttggcgatg ccggtcaggg gatcgatgag ggccgcggtc
     1741 ttgtggcggt actcggtgcg ctccttcgcc atcgccagca ggatgaacgc gattgcgata
     1801 gtgaacagca gcgcctcgaa gctcagcacg gtcatccaca cgctctcgaa cacctggttc
     1861 gcggtcggca accagggcag catcgcgccg agcggcgtgc gcagcagata aagcgagccg
     1921 tcggcgaaca gcatgaagat cgcaggccag cgcgacacca gcggctcgct ccgtccccgc
     1981 cagaactcat aggcggtggc ccaggtgtag gcggcgatga tgccgcagct gagcagcacg
     2041 cgcacgtccc aggcattttc aacgatcggc agccggcaag cgacgagcca gagcgcggcg
     2101 ccgccgaaca gcaggatcgg cagcggcctg tgatggtcga agacgcgcgc gccggtccag
     2161 gtcacggcga aggcggtgaa cagcaggctg ttggcgaggt cgatggagat cagatcgggc
     2221 gcggagccgt acaggccgaa cagcatgatt gagccggcgc gcagcagatg cgcgaagccc
     2281 caccacgcca ctgcggtgat cgcggtgttc tgcacccacg cgaacagcag cagcaatccg
     2341 aggatcgcct cgacgtagat ggtgacaagg aacagtgtgt tgacgtcgag attcatcgcg
     2401 ctcaaccggt gcgccggaga tcgggaagcg acggttgaaa ccgcgccact gcccgcttat
     2461 tgccgcggcc gcaaacaatc ggtgaatgcg ggcgactatt gtactgtgat accactctat
     2521 ggtttcgcca atgtttcggc gtcgtctcgg cggcacttga ttcggccttg tttccaaagg
     2581 gttggtcatc tagggtcggc gccccgccgg ggatttgcga gaatgcagtt ctgcaatgga
     2641 attatcgagg cgatcggcaa cacgccgctg atcaagctcg aacgcgtatc ggcggcgacc
     2701 gggtgcacca tactcggcaa ggccgagttc atgaatccgg gccagtcggt caaggatcgc
     2761 gccgcattat tcatgatcca ggacgcggtg aagcggggcg aactcaagcc cggcggcatt
     2821 gtcgtcgagg ggaccgccgg caacaccggt atcggacttg ctctcgtcgg caacgctctg
     2881 ggttttcgca gcgtgatcgt catcccggac acgcagagcc aggagaagaa ggacacgctg
     2941 cggctctgcg gcgccgaact ggtcgaagtg ccggccgtcc cctactccaa cccgaacaac
     3001 tacgtgaagg tctctggccg cctggccgag cagttggcca agaccgaacc gaacggcgcg
     3061 gtctgggcga accagttcga caacctcgcc aatcggcagg gccacctcga gacgaccggg
     3121 ccggaaatct ggcgtcaaac cgacggcaag atcgacggct ttagctgtgc cgtcggcacc
     3181 ggcggcacgc tcgcgggggt cgccatcgcg ctcaaggagc gcaacagcgc ggtccgcatc
     3241 gctctcgccg acccgatggg cgcggcactc tacagctact acacgaccgg cacgctcaag
     3301 tccgagggct cctcgatcac cgaaggcatc gggcagggcc gtatcaccaa gaatatcgag
     3361 aacgcgccga tcgacgtcgc ctaccagatt cccgacgagg aggcggtgcc gatcatcttc
     3421 gatctgctcg agcacgaagg cctctgcctc ggcggctcgt ccggcatcaa catcgctggg
     3481 gccttgcgcc tggccaacga gctcggcccg gggcacacga tcgtcactat attggccgat
     3541 tgcggcacgc gctatcagtc gaagcttttc aatccggagt ttctgcgtga gaagaagctc
     3601 ccggttccgc cctggctcga acgccggtcg cggatcgagg tgccgtacgt gcgaacataa
     3661 cagccgcgtc ggcgttgatg cttaggtcaa gaaccgcatg ctgagaaccg acgactcccc
     3721 tgccccgccg ctgccgagcc gctggctggt atccacagcg tggctcgccg accatctgcg
     3781 cgaccgcaac ctttcggtcg ttgacgcctc ttcggtcccg cccggaaagc aaggcgacgc
     3841 tcatgccgat tatcggcaag gccacattcc cggcgccgtg ttcttcgaca tcaacgcgat
     3901 cagcgatcat tccaccgagc tgccgcacat gctccccggc ccggctcaaa tcggcgtggc
     3961 cgcaggcgcg ctcggcatca gcgagaccga cacgatcgtc gtctacgaca gcgccgggct
     4021 ctattccgcc gcgcgggtgt ggtggacgtt ccgcatcttc ggcgccaaag acgttttcat
     4081 cctcgacggc gggctgccga agtggaaagc agagggccgg ccgctggaga acggcgacgc
     4141 cgcccggcca gcgaagaaat tccaggccga gatgaatgtc ggcgcggtcg cgatgctggc
     4201 cgacgtgcgc atggcgttga ccgacgacag cgcccagatc gtcgatgccc gcccagccga
     4261 acgcttcagc ggcaaggccg ccgaaccacg gccggggctg cgttcaggcc acatgcctgg
     4321 ctcattcagc gtgccctaca gcggcttgct cgagaacggc cgcctcgtcg cgcgcgaacg
     4381 cattgcgagc gcgttcaagg aggccggagt cgatctcgac aagccgatca tcacctcgtg
     4441 cggctccggc gtgaccgctg cgatcctgac gttcgcgctt gacgcgatcg gcaagcaagc
     4501 caagggcctc tacgacggct cctgggcgga atggggttcg cgccccgatc ttcccgtcga
     4561 acgcggctag tgcgtcatgc cggcgcgtgc gcatcccgtc gccctggtga ccggaggcgc
     4621 gaacggcata gggcaagcta tcgtacgccg cctcaccggc aacagttggc gggtcggcct
     4681 cctcgatctg cccgagagcg ggctgcatcg cgcctttccg cgcggtatgc gccacgtggc
     4741 gctcatcgaa ggcgacgtcg gcatcgagga aacggcgccg cgcgtggtcg ccgccattct
     4801 cgagcgtttc ggagggctcg acgcactcgt ctccaatgcc ggcatcatga tccgcaagcc
     4861 gctgcgccgg ctgacgctgg ccgaatggca tcgtgtgctc gacaccaacc tgaccgcgac
     4921 atttctgctc gcgcgcgcgg ccgagaagcc gctgcgcaag gcgcacggct cgatcgtcac
     4981 catcgcatcg acccgcgcgc tgatgtcgga gcctgacacc gaatcctatt cggcctcgaa
     5041 gggcggtatc gtcgcgctca ctcacgcgct cgcggtcagc ctcggaccgg atatccgcgt
     5101 caactgcgtc agtcccggct ggatcgagac aaaggatcaa ggcgcactgc gccgcaagga
     5161 tcatgcgcag caccctgccg gccgcgtcgg caagccgcag gacatcgccg agatcgtctt
     5221 ctggctcctc gaccgcgagc gctccggctt cgtcaccggc gccaatttcg tcgtcgacgg
     5281 cggcatgacc cgcaagatga tctatgtgga atgaatgccg ctgatcgcgc tgccgcccgg
     5341 ttcgctcagg ccgaagccca caggtgctgg gcggcgtagg cgcgccaggg tcgccatgca
     5401 ttggcgcggt cgagcagttc ggatgaggaa ggtcggcgcc gttcacggcc ggcgatagcg
     5461 cgcaacagcc cgatgtcggc cgccggaaaa gcgtcgggct cgcgcagctg acgcaaggcg
     5521 atgtactgcg ctgtccactc ccccacgccg cgaatggatc gcagccgttt caccgcatcc
     5581 tccagcccgc aattcgcgtc gaacaggtgc gggtcggcga ccgccgccgc agcgaccgcc
     5641 gagagcgccg ccgcgcggct gcgcggcatg ccgagtgatg tcaggtcggc gcaggcgagc
     5701 gccgcggggc tcggaaacac aagcgtgagc tgcgcgtcgg ccgtggcaag gcgctgaccg
     5761 tgcgcggcga cgaggcgcgc cgccagcgtc gccgcggcgg caaccgtaat ttgctgcccg
     5821 agcacggccc ggatcgcgag ctcaaaccca tcccatgcgc ccgccacgcg cagcccgggc
     5881 cgcgccttga ccaaaggcgc cagcgccgga tccttcgcca ggtgtgcggt gatagccacc
     5941 ggatcagccg ccaggtcgaa cacgcgacgc agccgcgcaa tgatggtcgg caaggccgag
     6001 agcttgggaa agcgcaccgt tgcccgcagc gcattgccgg cgccgcgctg caccgcgacg
     6061 gtgccgtgca cgccgttcaa ctccaccgct cgggcgtagc aatcggcgcc gacggattcg
     6121 accccggcaa tcgcgcggcg gcgcagaaac tcaagcatcg ccgcccaatc gtagggcggg
     6181 tgatagcgca gcagcagaac aatctcaccc tgcggtccgg ccgggcagtc cgggccgctc
     6241 acgcgccgca actcgctcgg cgggcggccg aacaaagcga ggaaggtttc gttgaagcgg
     6301 cgcacgctgc caaatcccga ggcgaaggcg atttcggcca tcggcagtcg cgtctcatga
     6361 atgagctgct tggcgaggag gatgcgccgg gtctgggcaa ctgccaccgg ggaagctccg
     6421 agatgctggc ggaacaagcg ccgcagctgc cgttcaccga gcccgaggcg gcccgccagg
     6481 gtgtccaggt catcttcgtc caaggcgccg agttcgatca gattgagcgc gcgcgagacg
     6541 ctgtttgagg tgccgcgcca cgcgccgaga tcgggcgcag tctcggggcg acagcgcagg
     6601 caggggcgaa acccggcctc ctgcgctgct gccgcggtcg gaaagaacac gacattgtgc
     6661 gaatgcggcg tgcgcgccgg acacaccgga cggcaataaa tgcccgtggt cttgacgccg
     6721 gtgaaaaagc ggccgtcaaa gcgggcatcg cgctgaacga tcgcgcggta g
//
LOCUS       DATMQB010000287         2204 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1356354, whole genome shotgun sequence.
ACCESSION   DATMQB010000287 DATMQB010000000
VERSION     DATMQB010000287.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2204)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2204)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2204
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1356354"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..294)
                     /locus_tag="VNY79_08370"
     CDS             complement(<1..294)
                     /locus_tag="VNY79_08370"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72499.1"
                     /translation="MQDQGEVLRHLRTEHQAWIPADLESRFEAADFAADEIVEANAVP
                     HRIGDRTVGGGHGLQPIHQALLDRRLPDHAFAGQAEADDRLDHGKQILNAMMQL"
     gene            375..731
                     /locus_tag="VNY79_08375"
     CDS             375..731
                     /locus_tag="VNY79_08375"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72500.1"
                     /translation="MGIDLRLAGTRRPFGIAAGGLRLRQPDPRSLRQELLPERRLSYA
                     RGGLRYTLQIHSDQNSCVEPALVGATATDAAGSAPENTGDAREPQPLLDRDAEFEEQR
                     KVVLHDWQLYHAGKEG"
     gene            915..>2204
                     /gene="pcaB"
                     /locus_tag="VNY79_08380"
     CDS             915..>2204
                     /gene="pcaB"
                     /locus_tag="VNY79_08380"
                     /EC_number="5.5.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR02426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047472 - 3-carboxy-cis,cis-muconate
                     cycloisomerase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-carboxy-cis,cis-muconate cycloisomerase"
                     /protein_id="HWX72501.1"
                     /translation="MSTTPATVIDSAVFGDIFSTAPMRSVFSDANRVQKYLDFEAALA
                     RAQARLGIIPRAAAEEIVRHCRAGEVDFVKLKQDTERIGYPVLPVVQQLVALCRGGHG
                     EWCHWGTTTQDVTDSATVLQIREALALVEADIDAIADALGSLARRYRDTPMAGRSNLQ
                     QAVPITFGYKVATVLAAFGRHKQRLKELRARVLVGEFGGAAGTLASLGGRGLEVQAEL
                     MRELGLGVPAIAWHTVRDTIAEAGCFLGLLAGTCAKIAFDVKLLMQTEVEEVFEPFHQ
                     GRGSSSTMPQKRNPIGSVYITALNSVVRQHVAALLDAMVEDHERATGPWEIEWIVLPE
                     IFCLTAGVLAQTRSVVAGLQVDEKRMRANLDITRGLIVSEAVMMELGRHLGRQYAHDL
                     VYDICRQVIASGRPLADLLAENAEVARHLDRAALARLC"
BASE COUNT          380 a          740 c          709 g          375 t
ORIGIN      
        1 gagctgcatc atcgcattca gaatctgttt accgtgatcc aggcggtcat ccgcttcagc
       61 ctgcccggcg aaggcatggt ccgggagtcg gcggtcaagc agcgcctgat ggatcggctg
      121 cagtccatgt ccgccaccaa ccgtgcgatc accgattcga tgggggacgg cgttcgcctc
      181 aacgatctca tcagcagcga aatccgcggc ttcgaatcgc gattcgagat cagcgggaat
      241 ccacgcctgg tgctcggtcc gcagatgacg cagaacctct ccctgatcct gcatgagctg
      301 cttaccaatg cgctcaaata cggcgcgctg tcggttccgc aaggccgggt caacgtgcgg
      361 ctggattgga cgtcgtgggt attgaccttc gtctggcagg aacgcggcgg cccttcggta
      421 ttgccgccgg agggctcagg cttcggcagc cggatcctcg gagccttcgc caagagcttt
      481 tgccagaacg tcgactctcc tacgcccgcg gcgggctgcg ctacacgctg cagattcatt
      541 cggaccagaa cagctgcgtc gagcctgcct tggttggggc cacggcaacg gatgctgccg
      601 gctcggcacc tgaaaatacc ggcgacgcgc gtgagccgca gcctttgctc gaccgcgacg
      661 cggagttcga ggagcagcgg aaggtggtgc tgcacgattg gcagctctat cacgccggca
      721 aggaaggcta ggtgtctagc tgcggtcccc ggtccggccg gctcgtccgc cgccgagaac
      781 gcatcgaatc ggcgaaacgc aagcttcacc tcccaagaac gtcatttgaa gcggtatttt
      841 cacgcgcgtg tatcgcttgg ctcgaagtca gccgatagtc tcaccaagcc gcaccagcgc
      901 gagagccacg agtcatgtcc acgacgccgg caaccgtcat cgattccgcc gtgttcggcg
      961 acatcttctc gactgcgccg atgcgcagcg tgttctcaga cgcgaaccgg gtacagaaat
     1021 atctcgactt cgaggcggcg ctggcgcggg cgcaagcgcg actcggcatc atcccgcggg
     1081 cggccgcgga ggaaatcgtc cgccattgcc gtgccggcga agtcgatttt gtcaagctaa
     1141 agcaggacac cgagcgcatc ggctatccgg tgctgccggt agttcagcaa ttggtcgcgc
     1201 tctgccgcgg cgggcacggc gagtggtgcc attggggcac caccacccag gacgtgaccg
     1261 acagcgccac ggtgctgcag atccgcgagg cgctcgccct ggtcgaagcg gatatcgacg
     1321 cgatcgccga cgccctcggc agcctcgcgc gccgataccg cgatacgccg atggccgggc
     1381 gcagcaatct gcagcaggcc gtgccgatca ccttcggcta caaggtggcg accgtcctcg
     1441 ccgcgttcgg gcgccacaag cagcgcctca aggagttgcg cgcgagggtg ctggtcggcg
     1501 aattcggcgg cgccgccggc acgctcgcgt cgctcggcgg ccgcggcctc gaagtacagg
     1561 ccgaattgat gcgcgagctc gggctcggcg tgccggcgat cgcctggcac acggtgcgcg
     1621 ataccatcgc cgaggccggc tgctttctcg gcctcctcgc cggcacctgc gccaagatcg
     1681 ccttcgacgt gaagctgttg atgcagaccg aggtggaaga ggtgttcgag cctttccacc
     1741 aaggccgcgg ctcgtcgtcg accatgccgc agaaacgcaa cccgatcggg tccgtctaca
     1801 tcaccgcgct taactccgtg gtgcgccagc acgtcgccgc tctgctcgac gccatggtcg
     1861 aggaccacga gcgcgcaacc ggcccgtggg agatcgaatg gatcgtgctg ccggaaatct
     1921 tctgcctcac cgccggcgtc ttggcgcaga cgcggtccgt cgtggccggc ctgcaggtcg
     1981 acgagaagag aatgcgcgcc aatctcgaca tcacgcgcgg gctcatcgtc tccgaggcgg
     2041 tgatgatgga gctcggccgg catctcggcc gccaatacgc gcatgacctc gtctacgata
     2101 tttgccgcca agtcatcgcc agcggccggc cgctcgccga cctcctcgcc gagaacgcgg
     2161 aagtcgccag gcatctcgac cgcgccgcac tcgcccggct gtgc
//
LOCUS       DATMQB010000288         2715 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_413846, whole genome shotgun sequence.
ACCESSION   DATMQB010000288 DATMQB010000000
VERSION     DATMQB010000288.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2715)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2715)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2715
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_413846"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(166..522)
                     /gene="yidD"
                     /locus_tag="VNY79_08385"
     CDS             complement(166..522)
                     /gene="yidD"
                     /locus_tag="VNY79_08385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HWX72502.1"
                     /translation="MPTTAKTWRHAPRLFGRGLVRAYRYTLSPFVGFDCRHLPTCSEY
                     ADQAVERYGLWAGSWMTLARLLRCQPFGTAGLDFVPAALPPNARWYIPWRFARWRGTN
                     PGPPAPIPAAPGAAGE"
     gene            complement(679..1146)
                     /locus_tag="VNY79_08390"
     CDS             complement(679..1146)
                     /locus_tag="VNY79_08390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-sulfur cluster assembly scaffold protein"
                     /protein_id="HWX72503.1"
                     /translation="MINEVYNRRIIELAASIPRIGRLAAPDATAKAVSRLCGSTVTVD
                     LKMDGDRVTDFAHEVKACALGQASSSIMAHHVVGSNADELRALRETVRKMLKENGAPP
                     RDGKWADIAVLEPVRDYKARHASTLLTFDAVVDAIGQIETRRSAKDTAKTAAE"
     gene            1361..1813
                     /gene="hisI"
                     /locus_tag="VNY79_08395"
     CDS             1361..1813
                     /gene="hisI"
                     /locus_tag="VNY79_08395"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004635 - phosphoribosyl-AMP
                     cyclohydrolase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HWX72504.1"
                     /translation="MTENIAFAPPGTAVELEEGSALTPKFDADGLVTCVATDARSGDV
                     LMVAHMNAEALAKTIATGQAWYFSRTRRVLWRKGETSGHTQRVVEMGVDCDQDAIWIK
                     VEQVGGACHTGRPSCFYRAVPVGKGGAVTLEFRGERVFDPKKVYRDQS"
     gene            complement(1879..>2715)
                     /locus_tag="VNY79_08400"
     CDS             complement(1879..>2715)
                     /locus_tag="VNY79_08400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009764268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA ester lyase"
                     /protein_id="HWX72505.1"
                     /translation="MTSGADALIIDLEDSIALDGKARARESAAAFLKETVAAAQRPYL
                     LVRVNSLQTGLTDADLDAVVPARPDAIMLPKAEGGASVVHADAKLAVREAIAGVPDGH
                     VKMIVLATETAAAMFRAGSYAGASARLIALTWGAEDLSAELGAERNRDTEGRFLDPYR
                     LARVLCLAGAAAAEVPALDTVYVDFRDSEGLRRECEEARRDGFAGKIAIHPAQVPVIN
                     ELFTPTLEAVAHAQAIVEAFAQNPGAGVVAIGGVMVDRPHLAQAKRVLARASPAPCHT
                     RA"
BASE COUNT          426 a          894 c          960 g          435 t
ORIGIN      
        1 tggcgagcga aggcgaaatg cccttggcga cctcgaggcc ggtgatgttg gcgggatagt
       61 cccgacgtgc gccgtcgggg aaggtcaacg cgaccatggt ccactcctgt tgctcactcc
      121 tgcggacgag cgcaggtaag cccggccggg cggtctcttg ttccgtcatt ccccagccgc
      181 gcccggtgcg gcgggaatgg gcgccggcgg gccggggttg gtcccgcgcc agcgcgcgaa
      241 gcgccacgga atataccagc gcgcattggg cggcaacgcc gccggcacga aatcaagtcc
      301 tgccgtgccg aaaggctggc agcgcagcag ccgcgccaag gtcatccatg agcccgccca
      361 caagccgtag cgctcgaccg cctggtcggc atattcggaa caagtcggca ggtgccggca
      421 atcgaagccg acgaacggcg agagcgtgta gcggtaggcc ctcaccaagc cgcggccgaa
      481 caggcgaggc gcgtgacgcc aagtcttggc ggtcgtaggc aagctatacc ggtgccgttt
      541 gaagttgacc cgtcatcctg aggtgcgcgc cgcaggcgcg cctcgaagga tgcggctcgg
      601 cccgggccgt cgcccttcga ggctcgctac gtcgcacctc agggtgacgg aacaagtcat
      661 cgcttgccgc cgtgaatgtt attccgccgc ggtcttcgcg gtgtctttgg cgctgcgcct
      721 ggtctcgatc tggccgatgg catcgactac cgcgtcgaag gtgagcaagg tcgaggcgtg
      781 gcgcgccttg tagtcgcgca ccggctcgag cacggcgatg tccgcccact tgccgtcgcg
      841 cggcggcgcg ccgttctcct tgagcatctt gcgcacggtc tcccgcagcg cgcgcagctc
      901 gtccgcattc gagcccacga catgatgcgc catgatcgag gacgacgcct ggccgagcgc
      961 gcaggctttc acctcgtggg cgaaatcggt cacccggtcg ccgtccatct tgagatcgac
     1021 ggtcaccgtc gagccgcaga gccgcgacac cgccttggcc gtcgcgtcgg gtgcggcgag
     1081 acggccgatg cgcgggatcg aggcggcaag ctcgatgatg cggcgattgt agacttcgtt
     1141 gatcattgcc agatcgcgct tgggcgccgt ccacttgtcc gtgaactata tataggcgcg
     1201 ggcaggcgcg ggcgaggggc gtcattccgg ccgagcgcag cgagggccgc aatccatagt
     1261 cacagatggt ccaggcaata ctccatacca attctgcgcg ttctgtggtt atggattccg
     1321 ggctcgccgc tgcgcggcgc cccggaatga cgggctggat atgacggaaa acatagcctt
     1381 cgcgccgcct ggcaccgcag tagagcttga ggaaggctcg gcgttgacgc ccaaattcga
     1441 cgccgacggg ctcgtcacct gcgtcgcgac cgacgcccgc tcgggcgacg tgctgatggt
     1501 cgcgcacatg aacgccgagg cgctggcgaa gaccatcgcc accgggcagg cttggtattt
     1561 cagccgcacg cgccgcgtgc tgtggcggaa gggcgagacc tcgggccaca cccagcgcgt
     1621 cgtcgagatg ggcgtcgatt gcgaccagga cgcgatctgg atcaaggtcg agcaggtggg
     1681 cggcgcctgc cataccgggc gcccctcctg cttctaccgc gcggtgccgg tcggcaaggg
     1741 cggcgccgtc acgctcgaat tccgcggcga gcgcgtcttt gatccgaaaa aggtgtatcg
     1801 cgatcagtca tgatgcgcgt cattgccgga cttcggtccg gcaatccatg gggcagagac
     1861 gctgcgcgga aacgcggatc aggcccgcgt atgacaggga gcggggcttg cgcgcgcgag
     1921 cacgcgcttc gcttgcgcga ggtgcgggcg gtcgaccatg acgccgccga tggcgaccac
     1981 gccggcgccg gggttttggg caaaggcttc gacgatggcc tgcgcgtgag cgacggcttc
     2041 cagcgtcggg gtgaacagct cgttgatgac tggcacctgc gccgggtgga tcgcgatctt
     2101 gcccgcaaaa ccgtcgcggc gcgcctcttc gcattcgcgg cgcaagccct cgctgtcgcg
     2161 gaagtcgacg tagaccgtgt cgagcgccgg cacctccgcc gcagcagcac cggcgaggca
     2221 gagcacgcgc gccagccggt aaggatcgag aaagcgcccc tcggtatcgc ggttgcgttc
     2281 ggcgccgagt tcggcggaaa ggtcctccgc gccccaggtc agggcgatga gccgcgcgct
     2341 tgcgccggcg tagcttccgg cgcggaacat ggcggctgcg gtttcggtcg cgagcacgat
     2401 catcttgacg tggccgtcgg gcaccccggc gatcgcctcg cgcacggcga gcttggcgtc
     2461 ggcgtggacg accgaagcgc cgccttcggc cttgggcagc atgatggcat cgggccgcgc
     2521 cggcacgacg gcgtcgaggt cggcgtcggt gaggccggtc tgcaaactgt tgacccgcac
     2581 cagcagatag ggccgctgcg cggccgcgac cgtctccttg aggaacgccg ccgcgctttc
     2641 ccgcgcgcgc gccttgccgt cgagcgcgat cgaatcctcg agatcgatga tcagcgcatc
     2701 ggcgccgctg gtcat
//
LOCUS       DATMQB010000289         2273 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2588083, whole genome shotgun sequence.
ACCESSION   DATMQB010000289 DATMQB010000000
VERSION     DATMQB010000289.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2273
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2588083"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..>2273
                     /gene="hrpB"
                     /locus_tag="VNY79_08405"
     CDS             <1..>2273
                     /gene="hrpB"
                     /locus_tag="VNY79_08405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013912822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004386 - helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006139 - nucleobase-containing compound
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent helicase HrpB"
                     /protein_id="HWX72506.1"
                     /translation="MAKTLGERVGDTVGLRVRFGSKVSRRTRIEIVTEGVFTRLVLDE
                     AMLDGVAAVLFDEFHERSLDADLGLALARDVQQGLREDLRLLVMSATIDGARVAALLD
                     QAPVIAAEGRTFPVETRYVGRDTRPIEPRIADAIGRATRAEPGSLLAFLPGAAEIRRT
                     QALLEGRLEPTCDVVALYGALAGDEQDRAIAPAARGRRKVVLATSIAETSITIEGVRI
                     VIDSGLARVPRYEPDVGVTRLETVRVSRAAADQRRGRAGRTEPGISYRLWDEPQTAAL
                     EAYSRPEILSADLSGFALNLAAWGAAPEKLAFLDPPPHLALAEARTLLVELGAIDADG
                     RITEEGRKLRRLPLPPRLARMVVDAAAEGTALLAAEIAVLIGERGLGGDDTDLTHRLD
                     ALRRDRMPRAHEARAMAQRWAETAETMSSPHTQRNPSPLVGQGGVGGREATREGRRTR
                     MLSASSPNHLPTPTPSPSPQGGGERQELSAGALLALAYPERIAKNRGGGAGAFLLANG
                     RGAQVDPASPLARTPFLAVAELAGSATAGRILLAAPITLAEIEARFAERIDTRKEIAF
                     DQATASLRARRHRRFGALVLSEQPMPAAANAAAARVLAEGVARLGVDRLPWTQALRQW
                     RDRVAFLRRAEGAEWPDLSDAALAADVDWLAALFDGKTALAELPTDELEAALKSRLPH
                     PLQRRLDAEAPTHFAAPTGTRVPINYDADGGPKVAVRVQELFGVDRHPAIAGGKVPLL
                     IELLSPAHRPVQMTRDLP"
BASE COUNT          310 a          858 c          768 g          337 t
ORIGIN      
        1 atggcgaaga cgctcggtga gcgcgtcggc gacacggtcg gcttgcgggt gcgcttcggc
       61 tcgaaggtgt cgcggcgcac gcggatcgaa atcgtcaccg agggcgtgtt cacgcggctc
      121 gtgctcgacg aggcgatgct cgacggggtt gccgccgtcc tgttcgacga attccacgag
      181 cgctcgctcg atgccgatct cggcctggcg ctggcgcgcg acgtgcagca gggcctgcgc
      241 gaggatctgc ggctcctcgt catgtcggcg acgatcgacg gagcccgcgt cgccgcgctc
      301 ctcgaccagg ccccggtgat cgccgccgaa ggccgcacct ttccagtcga gacccgctat
      361 gtcggccgcg atacgcggcc gatcgagccg cggatcgccg acgcgatcgg ccgcgcaacg
      421 cgcgctgagc ctggctcgct gctcgcgttc cttcccgggg cggcggagat ccgccgcacc
      481 caggcgctgc tcgaaggccg gctcgagccg acatgcgatg tcgttgcgct ctacggcgcc
      541 ctcgccggcg acgagcagga ccgcgccatc gcccccgccg cacgcggccg ccgcaaggtt
      601 gtgctcgcca cctcgattgc cgagacctcg atcaccatcg aaggcgtgcg catcgtcatc
      661 gacagcgggc ttgcccgcgt gccgcgctac gaacccgatg tcggcgtgac gcggcttgag
      721 accgtgcgcg tgtcgcgcgc ggcggccgac cagcgccgcg gccgcgccgg ccgcaccgag
      781 ccgggcatct cctaccggct ctgggacgag ccgcagaccg cggcgctcga agcctattcc
      841 cgccccgaaa tcctctccgc cgacctttcc ggttttgcgc tcaacctcgc ggcatggggt
      901 gcagcgcccg aaaagcttgc cttcctcgat ccgccgccgc acctggccct tgccgaggcg
      961 aggacgctgc tcgttgaact cggcgccatc gacgcagacg gccgcatcac cgaggaaggg
     1021 cggaaactgc gccggctgcc gcttccgccg cggctcgccc gcatggtggt cgacgctgcc
     1081 gccgaaggca ccgcactcct tgccgccgag attgccgtcc tgatcggcga acgcggcctc
     1141 ggcggggacg acaccgattt gacgcatcgc ctcgatgccc tgcgccgcga ccgcatgccc
     1201 cgcgcgcatg aggcgcgcgc tatggcgcaa cgctgggcgg agactgccga aacgatgtcg
     1261 tctccgcata cgcagcgcaa tccctccccc cttgtggggc agggtggggt ggggggtcga
     1321 gaggcgacgc gcgaaggtcg acggacgcgc atgctttcgg cttcgtcgcc gaaccacctc
     1381 ccgaccccca cccctagccc ctccccacaa gggggagggg agcgccagga gctatctgcc
     1441 ggcgctcttc tcgccctcgc ctaccccgaa cggattgcga aaaaccgcgg cggcggagcc
     1501 ggcgcgttcc tcttggccaa cggccgcggc gcgcaggtcg atcctgcgtc tccgttggct
     1561 cgcacgccat ttctcgccgt ggccgagctt gccggcagcg ccaccgcggg ccgcatcctg
     1621 ctcgccgcgc cgatcacact tgccgagatc gaggcgcgct tcgccgaacg catcgacacg
     1681 cgcaaggaga tcgccttcga tcaagcgacc gcgagcctgc gcgcgcgccg ccaccgccgg
     1741 ttcggcgcgc ttgtgctgtc cgagcagccg atgccggcag cggcgaacgc ggccgccgcg
     1801 cgcgtcctgg ccgaaggtgt cgcgcggctc ggcgtcgacc ggctgccgtg gacccaggcc
     1861 ctgcggcaat ggcgcgaccg ggtcgccttt cttcgccgcg ccgaaggcgc cgagtggccg
     1921 gatttgtcgg atgccgcgct ggccgccgat gtcgactggc ttgcggcgct ctttgacggc
     1981 aagaccgcgc tggccgagct tcccaccgac gaacttgaag ccgcactcaa gtcgcgcctg
     2041 ccccatcccc tgcaacgccg ccttgacgcc gaggcgccca cccatttcgc ggctccgacc
     2101 ggcacgcggg ttccgatcaa ttacgatgcg gacggcgggc cgaaggtagc ggtccgcgtc
     2161 caggagttgt tcggcgtcga ccgccacccg gcgattgctg gcggcaaagt cccgctgctg
     2221 atcgaactcc tctcgccggc gcaccggccg gtgcagatga cgcgcgatct gcc
//
LOCUS       DATMQB010000290         2212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1975688, whole genome shotgun sequence.
ACCESSION   DATMQB010000290 DATMQB010000000
VERSION     DATMQB010000290.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2212
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1975688"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            216..725
                     /locus_tag="VNY79_08410"
     CDS             216..725
                     /locus_tag="VNY79_08410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HWX72507.1"
                     /translation="MLERPDLEPAFFAPFVSSVMRVEPGWIDYNGHLNMAYYNVLFDR
                     AGDEAFDLLGCGAGYAKAHGLSTFTAEAHVRYLRELRSGDPVRVTFQLFDYDAKRMHY
                     FEQLFHAEEGWLSATSENMVLHVDLNARKTAAFPDAVAARLARMKAAHAHLPVPDGAG
                     RGIAMRAKP"
     gene            819..>2212
                     /locus_tag="VNY79_08415"
     CDS             819..>2212
                     /locus_tag="VNY79_08415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006614064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HWX72508.1"
                     /translation="MADPWRGTRDPAAAPGPAPGGIAARARAAPPGASYLAGLNQEQR
                     LAVESLDGPVLVLAGAGTGKTRVLTVRIAHILATGRARPSEILAVTFTNKAAREMKHR
                     VEEIVGGVVEGMPWLGTFHSIGVKILRRHAELVGLKPDFTILDVDDQIRLLKQLLAAE
                     NIDEKRWPARVLAMLIDGWKNRGLTPEQVPPAEAAVFANGKGLKLYKAFQERLKILNA
                     ADFGDLLLENIRLFREHPEVLRQYQGRFRFILVDEYQDTNVAQYLWLRLLAQKTSQAA
                     SANSTSPRTRAEVDARSAAGEGALPLPERAERPPHPAPHPASGEREELTEREPSSPAR
                     GEASREQTGAKNICCVGDDDQSIYGWRGAEVDNILRFEHDFPGATVIRLERNYRSTGH
                     ILAAASHLIAHNEGRLGKTLRTDDVPGEKVFVTGAWDSEEEARSVGEEIEELQRGGQT
                     GEKHALNQIAILVRA"
BASE COUNT          377 a          780 c          711 g          344 t
ORIGIN      
        1 cggttgccga ccatcgccgc caaggcggcg acaacggcct cgaccgcctt gcggtcgtgc
       61 ttaagcccct cccacgcctc ggtcatcacc attggcattg ctcttttccg gcaacgtggc
      121 cgcagcgccg ccagcggtca agggcgcttt cgccgcgctt gcttgacgcc ggaaaaccgg
      181 caaattgcca cccgcccaac gccgatttgc ttctcatgct cgaacgcccc gacctcgaac
      241 ctgccttctt cgcgccgttc gtctcgtcgg tgatgcgcgt cgagccgggc tggatcgact
      301 acaacggcca tctcaacatg gcctattaca atgtgctgtt cgaccgcgcc ggcgacgagg
      361 ccttcgacct cctcggctgc ggcgccggtt atgccaaagc gcacgggctc tcgactttca
      421 ccgcggaagc gcatgtgcgt tacctgcgcg aactgcgttc cggcgacccg gtgcgggtga
      481 cctttcagct cttcgactac gacgccaagc ggatgcacta tttcgagcag ctcttccatg
      541 cggaggaggg ctggctttcg gccacctccg agaacatggt gctccacgtc gatctcaatg
      601 cgcgcaagac cgcggccttt cccgacgccg tcgctgctcg tctcgcccgc atgaaggctg
      661 cgcatgcgca tctgccggtt cccgacggcg ccggccgcgg catcgcgatg cgcgcgaagc
      721 cctgaccggg cggtatgcac acacgccgcg gcttcccctc gtaaattgcc gcggacggtg
      781 ccattttttg gctgtgagaa tcatgggaac gtggcgcctt ggctgacccg tggcgaggga
      841 cccgcgatcc ggccgcagca ccggggccgg cgccgggcgg cattgccgcg cgggcgcgag
      901 cggcgccgcc gggggcgagc tatctcgccg gcctcaatca ggagcagcgg ctcgcggtcg
      961 agagcttgga cgggccggtg ctggtgctcg ccggcgccgg caccggcaag acgcgcgtgc
     1021 tcaccgtgcg catcgcccat atcctcgcca ccggccgcgc ccggccgagc gaaatcctcg
     1081 ccgtcacctt caccaacaag gcggcgcgcg agatgaagca ccgcgtcgag gagatcgtcg
     1141 gcggcgtggt cgagggcatg ccgtggctcg gcaccttcca ctcgatcggc gtcaagatcc
     1201 tgcgccgcca cgccgagctg gtcggcctca agcccgattt caccatcctc gatgtcgatg
     1261 atcagatccg gctgctgaag cagctcctcg cggccgagaa catcgacgag aagcgctggc
     1321 ccgcgcgtgt cctggcgatg ctgatcgacg gctggaagaa ccgcgggctc acgccggagc
     1381 aggtgccgcc ggccgaggcc gccgtcttcg ccaacggcaa ggggctcaag ctctacaagg
     1441 cgtttcagga gcggctgaaa atcctcaacg ccgcggattt cggcgatctc cttctggaga
     1501 acatccgcct gttccgcgag cacccggaag tgctgcgcca gtaccagggc cgcttccgct
     1561 tcatcctggt cgacgaatac caggacacca acgtggcgca gtacctctgg ctgcgtttgc
     1621 tggcacagaa aacaagccaa gcggcgagtg caaattcaac ctctccccgc acgcgggcag
     1681 aggtcgacgc gcgaagcgcg gcgggtgagg gggcgctccc gctgcctgag cgagcggaga
     1741 ggccccctca ccccgcccct caccccgcaa gcggggagag ggaggagcta acggaacgcg
     1801 agccatcctc tcccgcaagg ggagaggcaa gtcgggagca gaccggcgca aaaaacatct
     1861 gctgcgtcgg cgacgacgac cagtcgatct acggctggcg cggcgccgag gtcgacaaca
     1921 tcctgcgctt cgagcacgat tttcccggcg ccacggtgat ccggctcgag cgcaactacc
     1981 gctcgaccgg ccacatcctc gccgccgcct cgcacctgat cgcgcacaac gaaggccggc
     2041 tcggcaagac gctgcgcacc gacgacgtgc cgggcgaaaa ggtcttcgtc accggcgcct
     2101 gggattcgga ggaggaagcg cgctctgtcg gcgaggagat cgaagagctg cagcgcggcg
     2161 gccagaccgg cgaaaagcat gcgctcaacc agatcgccat cctggtgcgc gc
//
LOCUS       DATMQB010000291         3835 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1975704, whole genome shotgun sequence.
ACCESSION   DATMQB010000291 DATMQB010000000
VERSION     DATMQB010000291.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3835)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3835)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3835
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1975704"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..197
                     /locus_tag="VNY79_08420"
     CDS             <1..197
                     /locus_tag="VNY79_08420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72509.1"
                     /translation="YAPFTGGTISYIDGMGAKAFVDMCNSLAKRYGSRFKPPKILRDM
                     AKIGETFYGRFPPEKREAVA"
     gene            459..2531
                     /locus_tag="VNY79_08425"
     CDS             459..2531
                     /locus_tag="VNY79_08425"
                     /inference="COORDINATES: protein motif:HMM:NF014896.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S9 family peptidase"
                     /protein_id="HWX72510.1"
                     /translation="MLAAPVAPALRTTFAAFGRERIDEYDWLRDRNDPRVIAYLASEN
                     AYADARLKPIKPLVDELAAQLKARSAHADASVPALVNGYLYERRFGEGTQYPLIVRRR
                     AVRGAEEEIVLDVGVLAARHSQQCHFGAWAVSPDNTRVAFTVDFSGDREFRIFVRAIA
                     GGDIVDQGIESAASGIVFAADNRTLFYVRNEPQTLRSYQVWRHRIGSAAGNDVLVYEE
                     RDQTFSASLDLSKSRKFILLDLDAERWRESRYLPVDQPTGEFRVIEPRRGGLVYEADH
                     VGDKFFIRTNLDAPDFRLMSASETAPAAAHWREIVPQQVGRHLTHFEAFETFVAADFE
                     DESGTTLRAYNLPDGREIAVPRPAAIGVASTSFTNDSEANLDPAATVLRFRFSGMLQP
                     QCIYDFDVTTGALTLRKEDAASRWFDGARYAVDSISATAPDGEHVPLTIVYRKSARRL
                     GGNPTLVVGYGAYGLSWRATFTPSVFSLLDRGFIYAIAHVRGGHEKGERWYAEGRLLN
                     KRNTFTDFIAATEALMANGYAAPREVYAQGGSAGGLLMGAVANMRPDLYAGIVAEAPF
                     VDVVTTMSDAAVPLTTLEYDEWGNPAVKGEFEYMLSYSPYDNVMRRDYPAMFITAGFY
                     DSQVSYAEPAKWVARLRASKSDARDLLFKTDMEAGHGGRSGRLGSIDESAEIMAWLIA
                     HAREGRLP"
     gene            2613..>3835
                     /locus_tag="VNY79_08430"
     CDS             2613..>3835
                     /locus_tag="VNY79_08430"
                     /EC_number="6.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004357 - glutamate-cysteine ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HWX72511.1"
                     /translation="MARDQVDLTPIERRDDLINWIAQGIKRKSQFRIGTEHEKFAFTL
                     EGRHPVPYEGRRGIGALLEGMQLLLGWEPITEGPNIIGLFDVTGGGAITLEPGGQFEL
                     SGAQVETVHQTSSELMAHLAQVHEVARPLGIGFLGIGMAPTWTRAEMPQMPKGRYKIM
                     TAYMPKVGTLGLDMMYRTCTVQTNLDFSSEADMVKKLRVSLALQPVATALFANSPFTE
                     GKPNGFLSFRAEIWRHTDKDRTGMLPWAFEPGMGFERWVDYALDVPMYFIKHGDAYVD
                     VAGQSFRDLMKGKLAAMPGARATVSDWSNHISTIFPEVRLKRYLEMRGADSGPLPNLL
                     ALPALWAGILYDEVSLGGAWDLVKPWTAEERQKLRDAVPKEGLTAVVHGRAVREIATD
                     VLKLARAGLARRRQL"
BASE COUNT          668 a         1301 c         1216 g          650 t
ORIGIN      
        1 gctacgcgcc gttcaccggc ggcacgattt cctacatcga cggcatgggc gcgaaagcct
       61 tcgtcgatat gtgcaacagc ctcgccaagc gctatggtag ccgtttcaag ccgccgaaga
      121 ttctgcgcga catggccaag atcggggaaa cgttctacgg ccgcttcccg ccggaaaaac
      181 gcgaggcggt cgcgtagcgg atccccaatt aaactagact cccaattaat cagatgaacg
      241 gtgggtaagg ttcccttcga cctaaaaagt tccctcgccc gccgttttaa tgccgcaccc
      301 gcttcctatc gctccctgtg ctggggtggg gatagcgggt gacatacatg cacgggattc
      361 ccacgcgacg agaattcacg gccggtcttg ctggtctcgc ggcggcttct ctcgccggga
      421 gacgggcgtc cgcggtggcg gccgaggccg aggcgccttt gctcgcagcg cccgtggcgc
      481 cggcgttgcg gacgacgttc gcggcgttcg gccgcgagcg gatcgacgaa tacgattggc
      541 tccgcgaccg caacgatccg cgcgtgattg cctatcttgc gtcggagaac gcctatgccg
      601 acgcgcgtct caagccgatc aagccgctgg tggacgaact ggctgcgcaa ttgaaggcgc
      661 gttcggcgca cgcggatgcg agcgtaccgg cgctcgtcaa cggctacctc tatgagcgcc
      721 gcttcggcga gggcacgcag tacccgctca tcgtgcggcg ccgcgcggtg cgcggggccg
      781 aagaggagat cgtgctcgac gtcggcgttc tggccgcgcg ccattcccag caatgccact
      841 tcggcgcctg ggccgtcagc cccgacaaca cgcgtgtcgc cttcaccgtc gatttcagcg
      901 gcgaccgcga atttcgcatc ttcgtgcgcg cgatcgcggg cggggacatc gtcgatcaag
      961 gtatcgagag cgcggcctcc ggcatcgtgt tcgccgccga caaccgcacg ctcttctatg
     1021 tgcgcaacga gccgcaaacc ttgcgctcct accaggtctg gcggcatcgc atcggcagcg
     1081 ccgcgggcaa cgacgtgctg gtctacgagg agcgcgatca aaccttcagc gcttcgctcg
     1141 atctttccaa atcgcggaaa ttcatcctcc tcgacctcga cgccgagcga tggcgcgaat
     1201 cccgctacct gcccgtcgat cagccgaccg gggaattcag ggtcatcgag ccgcgccggg
     1261 gcggcctcgt ctatgaggcc gaccatgtcg gcgacaaatt cttcattcgc accaatctcg
     1321 acgcacccga cttccggctg atgagcgcga gcgagacggc gccggccgcc gcccactggc
     1381 gcgagatcgt gccccaacaa gtgggaaggc atctcactca tttcgaggcc ttcgagacct
     1441 ttgttgccgc cgacttcgaa gacgaaagcg ggacgacgct gcgcgcctac aacctgccgg
     1501 acgggcgcga gatcgcggtg ccgcggccgg cggccatcgg cgttgcctcg acctccttca
     1561 ccaacgacag cgaagccaat ctcgatccgg ccgcgaccgt gctgcgtttc cgtttcagcg
     1621 gcatgctgca gccgcaatgc atctacgact tcgacgtcac gaccggcgcg ctgaccctgc
     1681 gcaaggagga cgcggcgagc cgctggttcg acggcgcgcg ctacgccgtt gacagcatca
     1741 gcgcgaccgc gcccgacggt gagcatgttc cgctcaccat cgtctatcgc aagtcggcgc
     1801 gccggcttgg cggcaacccg acactggtag tcggctatgg cgcctacggg ctgagctggc
     1861 gcgcgacttt cacgccgtcc gtcttcagcc tgctcgaccg cggctttatc tatgccatcg
     1921 cacatgtgcg cggcggccac gagaaaggcg agcgctggta cgccgagggc cgcttgctga
     1981 acaagcgcaa cacgttcacc gacttcatcg ccgcgaccga ggcgctcatg gccaacggct
     2041 atgccgctcc ccgcgaggtg tacgcgcagg gcggcagcgc cggcggcctg ctcatgggtg
     2101 cggtcgccaa catgcggccc gacctctacg ccggcatcgt cgccgaagca cctttcgtcg
     2161 acgtggtcac cacgatgtcc gacgccgcgg tcccgctcac cacgctcgaa tacgacgaat
     2221 ggggcaatcc cgcggtcaag ggcgagttcg agtacatgct gtcctactcg ccctacgaca
     2281 atgtcatgcg gagggattat cccgcgatgt tcatcaccgc cggcttttat gacagccagg
     2341 tgagctatgc cgagccggcc aagtgggtcg cgcggctacg ggcgagcaag agcgacgcgc
     2401 gcgacctctt gttcaagacc gacatggagg ccggtcacgg cgggcgttcg ggccggctcg
     2461 gctcgatcga cgagagcgcg gagatcatgg cgtggctcat cgcccacgcc cgcgagggac
     2521 gtcttccctg aagccgaagc gtcatcggca gccggattgc tctcgggcgc ggcccgcgtg
     2581 taaggtcgcg gcccatttcg tccggtaccc gcatggcgcg tgatcaagtc gacctgacgc
     2641 cgatcgaacg gcgcgacgat ctcatcaact ggatcgctca ggggatcaag cggaaatcgc
     2701 aattccgcat cggcaccgag cacgagaaat tcgccttcac gctcgagggc cgccacccgg
     2761 tcccctacga gggacgacgc ggcatcggcg cgctgctcga aggcatgcaa ctgttgctcg
     2821 gctgggagcc gatcaccgaa ggaccgaaca tcatcggcct gttcgacgtg accggcggcg
     2881 gcgccatcac gctcgaaccc ggcggccagt tcgagctttc cggcgcgcag gtagagaccg
     2941 tgcaccagac ctcgagcgaa ctcatggcgc accttgcgca ggtgcacgag gtcgcgcgcc
     3001 cgctgggcat cggctttctc ggcatcggca tggcgccgac ctggacacgc gccgagatgc
     3061 cgcaaatgcc gaagggccgc tacaagatca tgaccgctta catgccgaag gtcggcacgc
     3121 tcggcctcga catgatgtat cgaacctgca ccgtgcagac caacctcgac ttctcgtccg
     3181 aagccgacat ggtcaagaag ctgcgcgtgt cgcttgcgtt gcagccggtg gccaccgccc
     3241 tgttcgccaa ttcgccgttc accgagggca agccgaatgg ctttctctcc ttccgcgccg
     3301 aaatctggcg ccacaccgac aaggaccgca ccggcatgct gccgtgggcg ttcgagcccg
     3361 gcatgggctt cgagcggtgg gtcgactacg cgctcgacgt gccgatgtat ttcatcaagc
     3421 acggcgacgc gtatgtcgat gtcgccggtc agtcgttccg cgatctgatg aaaggcaaac
     3481 tcgccgccat gccgggcgcg cgcgcgacgg tctcggattg gtcgaaccac atcagcacga
     3541 tttttcccga ggtgcggctc aagcgctacc tggaaatgcg cggtgccgac agcggcccgt
     3601 tgcctaacct gctggcgctg ccggccctct gggccggcat tctttatgac gaggtgagcc
     3661 tcggcggcgc gtgggatttg gtcaaaccct ggaccgccga ggaacgccag aagcttcgcg
     3721 atgcagtacc caaagagggt ctcacggcgg tcgttcacgg ccgcgcggtg cgcgagatcg
     3781 caaccgacgt gctcaagctc gcgcgtgccg ggctcgcacg ccgccgccag ctcga
//
LOCUS       DATMQB010000292         2298 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2588550, whole genome shotgun sequence.
ACCESSION   DATMQB010000292 DATMQB010000000
VERSION     DATMQB010000292.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2298)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2298)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2298
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2588550"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1265)
                     /locus_tag="VNY79_08435"
     CDS             complement(<1..1265)
                     /locus_tag="VNY79_08435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HWX72512.1"
                     /translation="MTKRFGEFVALDQVALKVKAGTFHALLGENGAGKSTLVKCIMGY
                     YLPDAGEVIVGNHQEVIGNPRAAHALGLGMVYQHFTLVPAMTVAENFVLARDDVPAVV
                     DWARERKALEEFLARMPFRVPLNARVSAISAGERQKCEILKQLYLKRRFLILDEPTSV
                     LTPGEADEVLGMLRGMVAGGALTILMITHKFREVMAFADEVTILRRGKLAGQGHVKDL
                     SPDSMARTMIGAEELTVQPARTGEFGAPRLDIEELCALDDGGQPAVRDVSLSIRGGEI
                     VGVAGVSGNGQRQLIEVLAGQREAESGYIYLQGESYHATRQEMRRNHLSVLPEEPLKN
                     ACVARMSVADNLAFREFDRAPFATGGWWLNRSTFHEQALRKIERYKIKTRSDSTAIGE
                     LSGGNVQRTVLARELAGDVAILIAANPCFG"
     gene            complement(1310..2023)
                     /locus_tag="VNY79_08440"
     CDS             complement(1310..2023)
                     /locus_tag="VNY79_08440"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HWX72513.1"
                     /translation="MPELARRKTEPQERYVPADPYPWPYNGDLRPRNTALVVIDMQTD
                     FCGVGGYVDKMGYDLSLTRAPIEPIKRTLAAMRAAGFHVFHTREGHRPDLADLPANKR
                     WRSRQIGAGIGDPGPCGRILVRGEPGWEIIPELAPRDGEPIIDKPGKGSFCATDLDLL
                     LRLRGIDNVVLTGITTDVCVHTTMREANDRGFECLLLEDCCGATDKGNHDHAVKMIKM
                     QGGVFGAVSDSAKLIAVVS"
     gene            complement(2029..>2298)
                     /locus_tag="VNY79_08445"
     CDS             complement(2029..>2298)
                     /locus_tag="VNY79_08445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX72514.1"
                     /translation="WNEGLSSGQGITAVALVIFARWNPMLCLAASILFGGAAALGPAL
                     QSVGVSQGYHLFNAAPYILTLLIMIATCSPKRTLVGAPAELSITR"
BASE COUNT          369 a          756 c          786 g          387 t
ORIGIN      
        1 ccgaagcagg gattggcggc gatcaggatg gcgacgtcgc cggcaagctc gcgcgccagt
       61 acggtgcgct ggacgttgcc gccggaaagc tcgccgatgg ctgttgagtc ggagcgggtc
      121 ttgatcttgt agcgctcgat cttgcgcagc gcctgctcgt ggaaggtcga gcggttgagc
      181 caccagccgc cggttgcgaa cggcgcgcgg tcgaattcgc ggaacgcgag attgtcggcg
      241 acgctcatgc gcgcgacgca ggcgttcttc agcggctcct cgggaagcac cgacagatgg
      301 ttgcgccgca tctcctggcg ggtggcgtga tagctttctc cctgcagata gatgtagccg
      361 ctttcggcct cgcgctggcc ggcgagcacc tcgatgagtt gccgctgccc gttcccggac
      421 acgccggcga caccgacgat ctcgccgccg cggatcgaca gcgacacgtc gcgcaccgcc
      481 ggctggccgc cgtcgtccag cgcgcaaagc tcctcgatgt cgagccgcgg cgccccgaac
      541 tcgccggtgc gcgccggctg caccgtcagc tcctcggccc cgatcatcgt gcgcgccatg
      601 ctgtcgggac tgagatcctt gacgtgcccc tgccccgcga gcttgccgcg ccgcaggatg
      661 gtcacctcgt ctgcaaaggc catgacctcg cggaatttgt gggtgatcat caggatggtg
      721 agcgctccgc ccgccaccat gccgcgcagc ataccgagca cctcatcggc ctcgcccggc
      781 gtgagcaccg aagtcggctc gtcgaggatg aggaagcggc gcttgaggta gagctgcttg
      841 aggatttcgc atttctgccg ctcgccggct gagatcgccg acaccctggc gttgagcggc
      901 acgcgaaacg gcatgcgcgc cagaaattcc tcgagcgcct tgcgctcgcg cgcccaatca
      961 acgaccgccg gcacgtcgtc gcgcgccagc acgaaattct ccgcgaccgt catcgccggc
     1021 accagggtga agtgctggta gaccatcccg aggccgagcg cgtgggcggc gcgcggattg
     1081 ccaatgactt cctggtgatt gccgacgatg acctcgccgg cgtcgggcag gtaatagccc
     1141 atgatgcatt tgaccagcgt cgacttgccg gcgccgttct cgccgaggag cgcgtgaaac
     1201 gtcccggcct tgacctttag cgcgacctga tcgagcgcga cgaactcgcc gaagcgcttg
     1261 gtcatgttga tcgcttcaac gccgaatgtt gcggtcgtag ccggctcgct cacgagacca
     1321 ccgcgatgag cttcgccgaa tcggagacgg caccgaacac gccgccctgc atcttgatca
     1381 tcttgacggc gtggtcgtgg ttgcccttgt cagttgcccc gcagcaatcc tccagcagga
     1441 ggcactcgaa accgcggtcg ttggcttcgc gcatggtggt gtggacgcat acgtcggtgg
     1501 tgatgccggt gagcaccacg ttgtcgatgc cgcgcagccg cagcagcaaa tcgaggtcgg
     1561 tggcgcagaa cgagcccttg ccgggcttgt cgatgatcgg ctcgccgtca cgcggcgcga
     1621 gctcgggaat gatctcccag cccggctcgc cgcgcaccag gatgcggccg cacggcccgg
     1681 gatcgccgat gccggcgccg atctgccgcg agcgccagcg cttgttcgcc ggcaggtcgg
     1741 caaggtcggg gcggtggcct tcgcgggtat ggaagacgtg gaagccggcc gcgcgcatgg
     1801 cggcaagcgt acgcttgatc ggctcgatcg gcgcgcgggt gagtgaaagg tcgtagccca
     1861 tcttgtcgac gtaaccgccg acgccgcaga agtcggtctg catgtcgatg acgacgagcg
     1921 cggtatttcg cggccgcaga tcgccgttgt agggccatgg atagggatcg gcgggaacgt
     1981 agcgctcctg cggctcggtc ttcctgcgcg caagctccgg cattgacttc acctcgtgat
     2041 cgacagttcc gcgggcgcgc cgacgagcgt acgcttcggc gagcaggtcg cgatcatgat
     2101 gagcaaggtc agaatgtagg gcgcagcgtt gaacaggtga tagccctggc tcacgccgac
     2161 cgactgcagc gccggcccga gcgcggcggc gccgccgaac aggatcgatg ccgcgaggca
     2221 cagcatcggg ttccagcgcg cgaagatgac gagcgcgacc gcggtgatgc cctgcccgct
     2281 ggagaggccc tcgttcca
//
LOCUS       DATMQB010000293         7623 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3523492, whole genome shotgun sequence.
ACCESSION   DATMQB010000293 DATMQB010000000
VERSION     DATMQB010000293.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7623)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7623)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7623
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3523492"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(13..675)
                     /gene="cofC"
                     /locus_tag="VNY79_08450"
     CDS             complement(13..675)
                     /gene="cofC"
                     /locus_tag="VNY79_08450"
                     /EC_number="2.7.7.68"
                     /inference="COORDINATES: protein motif:HMM:TIGR03552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043814 - phospholactate
                     guanylyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-phospho-L-lactate guanylyltransferase"
                     /protein_id="HWX72515.1"
                     /translation="MSDGIFAILPVRSLADGKSRLSPLLDAGERARLNEQLFAQTLDC
                     LAAYPGAASTLVASGSAEVLARARQTGMAAVADPPGGGLNEAVAAATAAARARGARGV
                     FVLPVDLPLITAAGLRDLLAQASPAPVCLLVPDRRGAGTNLIYQAPIRVASYAFGDGS
                     FERHRQAAQAAGLKVLVRREPSFALDLDLPADYTLWRELIQATPQTAGHRIDDEAHTH
                     GV"
     gene            complement(672..1619)
                     /gene="cofD"
                     /locus_tag="VNY79_08455"
     CDS             complement(672..1619)
                     /gene="cofD"
                     /locus_tag="VNY79_08455"
                     /EC_number="2.7.8.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043743 - LPPG:FO 2-phospho-L-lactate
                     transferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-phospho-L-lactate transferase"
                     /protein_id="HWX72516.1"
                     /translation="MLCALAGGVGGAKLAHGLSRILPPEDLAIVVNVGDDFEHLGLHV
                     SPDIDTIVYTLAGIANPETGWGVAGETWSFMDALGALGGETWFRLGDRDLATHVERTR
                     LLAEGAPLSAVTTRLARKLGVAAAIVPASDDPVRTFVATDEGELEFQHYFVRRHCAPR
                     VSSLSYRNADTARPAPIGGRPWTEMEIAGVIICPSNPYLSIAPILAMPAAHAWLKDRR
                     FPVAAVSPIVAGQALKGPAAKIMAELATEPSALAVARFYAGLVDFFVIDRADAALAHA
                     IRAEGMEPVVMDSVMKSLADRERLAREICALPAFSGSGR"
     gene            complement(1671..2390)
                     /locus_tag="VNY79_08460"
     CDS             complement(1671..2390)
                     /locus_tag="VNY79_08460"
                     /inference="COORDINATES: protein motif:HMM:NF013077.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HWX72517.1"
                     /translation="MTANFTADAATLLLDAPGVVEPAKDRGAVSSARAPAENSFANLV
                     MSRRSIRRYRPEPVDEALVERILAHATWAPSAHNRQPWRFAAVAPTKRRTLADAMAAR
                     LRRDRLADGDDPEVVAADAARSIARLTEAPALVLIALTMQEMDRYPDSRRAQAEFLMA
                     VQSTAMAAQNLMLAAQSEGLGSCVLCAPLFCPDTVVEALDLPRDWLPQCLITLGWPAN
                     AGKTASRRPLAEVLAAGAARC"
     gene            complement(2387..3418)
                     /gene="fgd"
                     /locus_tag="VNY79_08465"
     CDS             complement(2387..3418)
                     /gene="fgd"
                     /locus_tag="VNY79_08465"
                     /EC_number="1.1.98.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0006007 - glucose catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase
                     (coenzyme-F420)"
                     /protein_id="HWX72518.1"
                     /translation="MKLGYKASAEQFAPAALLEFACLAEEVGFDSVFISDHFQPWKHT
                     DGHAPFSLAWLGALGAKTSRIVMGTSVLTPTFRYHPSIVAQAFGTLGSLFPGRVILGV
                     GTGESLNEVPATGNPWPEFKERFARLRESIALIRRLWTEERVTFDGEYYRTRNATIYD
                     RPAVPVPIYVAAAGALVAKYAGRSADGFICTSGKPMELYTETLLPNVAAGLAQASRAD
                     SSFDRVIEVKVSFDTDRRRAMEDTRNWAALALTPEEKTSVEDPSEIERLAAALPIERA
                     ASRWIVSDDADEHIDKIMTYVALGFRHLVFHAPGADQKRFLQLYSKHVLPKLRTKAAA
                     VPVAGVVAA"
     gene            3634..4491
                     /locus_tag="VNY79_08470"
     CDS             3634..4491
                     /locus_tag="VNY79_08470"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HWX72519.1"
                     /translation="MRLNAFFPTRDIGTDPAKIRDWAQAAEALGYAHIEVPDHVFGAT
                     ARDGWVPIYNEKDAFHETFVTIGFLAAVTKTIGLTSGVLISPQRQTGLIAKQAAEADV
                     LSGGRIRLGIGVGWNHVEYEALGMEWKTRGARQAEQVEVLRRLWSDDLVSFSGRFHQL
                     KEVSILPAPVQRPIPIWFGGSSEAAVTRAARLGDGWMPIMAPDAEGEETLARLREQLK
                     SFGRDPAKFGIEGWLRMRESDPQRWAAAADGWRRLGADMVMLYPMYRIGGLDDHIETL
                     RRFKEVAGG"
     gene            complement(4568..5521)
                     /locus_tag="VNY79_08475"
     CDS             complement(4568..5521)
                     /locus_tag="VNY79_08475"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HWX72520.1"
                     /translation="MLLGFDLPTRGALASPQTITRLAIEGEAMGFDYLTLSDHIVIPR
                     DIEARYPYSTTGEFPSGGRTDWYEQLTSAAFVAAKTSRLRMVTSVIVVPHRPAVLTAK
                     MLATIDLLSNGRLTVGVGAGWMKEEFEAVGTPPFAERGAVTDEYMAAFRELWTKDAPQ
                     FEGRYVRFSNIFMAPKPVQKPHPPLWVGGESPPALRRVAKLGDGWYPIGTNPQHPLDS
                     LPRMRAGIERMRRMVAEAGRDPRQIAIGYRIQRFGANVPAKADDGERRLFSGGPAEIA
                     GDLRAFRDLGVTAVDMSFVGDTVDRTLADMKRFREEVAARL"
     gene            5556..6104
                     /locus_tag="VNY79_08480"
     CDS             5556..6104
                     /locus_tag="VNY79_08480"
                     /inference="COORDINATES: protein motif:HMM:TIGR03668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03668 family PPOX class F420-dependent
                     oxidoreductase"
                     /protein_id="HWX72521.1"
                     /translation="MAAERASHKDGGQTQMSATSRSADGAAMLTSHQQRFLETRRVVR
                     LATADARGAPHVVPVCFAVADGTLYVTIDEKPKRRSGAPLKRLRNIAENPAVAVVADH
                     YDEDWTRLGWVMLQGRADILSVGAEHARAQALLRARYPQLGPMSIEALPVIAVRVERV
                     VSWGDLSVAGLASPAQGGLNQD"
     gene            6137..6976
                     /locus_tag="VNY79_08485"
     CDS             6137..6976
                     /locus_tag="VNY79_08485"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:TIGR03619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0070967 - coenzyme F420 binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class F420-dependent oxidoreductase"
                     /protein_id="HWX72522.1"
                     /translation="MHIGLTMFPTDYSIQPTDLAMEAEARDFESLWLPEHTHIPTSRK
                     SPWPGGAELPKYYYDTYDPFLSLAAAAAVTKKIKLATGICLVVERDPIHTAKEVSTVD
                     RLSAGRFIFGIGGGWNAEEMANHGTDFATRFKLMRERIEAMKAIWAQSKAKYSGEFVK
                     IDEMMQWPKPIQKPHPPIVVGGGFPHAAKRAIAYGDGWIPIGGRSDPLDVLPQFRQMA
                     KDAGRDPASLSFDVFGAPRDLEALKRYRDAGVDRAIFMLPSKSRDEVLPMLDQSAALV
                     KGL"
BASE COUNT         1378 a         2463 c         2519 g         1263 t
ORIGIN      
        1 aagtcggtga cgtcaaacgc catgagtgtg cgcctcgtcg tcgatgcgat gccctgccgt
       61 ttgcggcgtc gcctggatca attcccgcca cagcgtgtag tcggcgggaa ggtcgagatc
      121 gagagcgaag ctcggctcgc gtcgcacgag aaccttcagg cccgcagcct gcgccgcctg
      181 gcgatggcgc tcgaagctgc cgtcgccgaa ggcgtaggac gcgacccgga tgggagcctg
      241 atagatcagg ttggtcccgg cgccgcgccg gtcgggcacc agcaggcaga ccggggcggg
      301 cgacgcttgc gccagcaggt cgcgaagccc ggcggcggtg atgagcggca gatcgaccgg
      361 aagcacgaag acgccgcggg cgccacgcgc gcgggcggcg gccgtcgctg ccgcgaccgc
      421 ctcattgagg ccgcctccag gcggatcggc gacggcggcc atgccggttt gtcgcgcgcg
      481 agcgagcacc tcggccgaac cgctcgcgac gagcgtcgaa gcggcgccgg gataggccgc
      541 aaggcagtcg agggtttgcg caaacagctg ctcgttgagg cgcgcccttt cgccagcatc
      601 gagcagcggg ctcagcctgg acttgccgtc agcaaggctc cgcaccggga gaatggcgaa
      661 aatgccgtcg ctcatcggcc ggatcccgag aatgcaggaa gtgcgcaaat ctcccgcgcg
      721 agccgctccc gatcagcgag gctcttcatc acgctatcca tgacgaccgg ctccattcct
      781 tcggcgcgaa tggcgtgcgc gagcgccgcg tcggctctat caatgacgaa gaaatccacg
      841 agtccggcat agaagcgcgc gacggcgagc gctgacggct ccgttgcaag ctcggccatg
      901 atcttcgccg ccggcccctt cagcgcctgc ccggcaacga tcggggaaac tgccgcaacg
      961 gggaagcggc ggtccttgag ccaggcgtgc gcagctggca tcgccaggat gggcgcgatg
     1021 ctgagatatg ggttggacgg gcagatgatc acccccgcga tctccatctc ggtccatggc
     1081 ctgccgccga ttggagccgg tcgcgccgtg tcggcattgc ggtaggaaag gctcgagacc
     1141 cgcggcgcgc agtgccggcg cacaaaatag tgctggaatt ccagctcgcc ttcgtcggta
     1201 gcaacaaagg tgcgcacggg atcgtcgctc gcgggaacga tcgctgcggc aacgccaagc
     1261 ttccgcgcga gccgcgttgt gaccgccgac agcggtgcac cttcggcgag cagccgcgta
     1321 cgctcgacgt gggtggccag atcacggtca ccgagccgga accaggtctc gccgccgagg
     1381 gcaccgagcg catccatgaa cgaccatgtt tcgccggcga cgccccagcc ggtctctgga
     1441 ttggcgatgc ccgcgagcgt gtaaacgatc gtgtcgatgt ctggactgac atgcagaccg
     1501 agatgttcga aatcgtcgcc gacattgacg acgatagcca aatcctcggg cggcaggata
     1561 cgggaaagtc catgcgcgag cttcgcgccg ccgacgccgc cggcgagagc gcaaagcatt
     1621 ttagtccgtc cgcagggggt gcgcggcgcg ggccggcctt gagctcactc tcagcatcga
     1681 gccgcgccgg cggcgagcac ctcggccagc ggcctacggc tcgccgtctt gcccgcgttc
     1741 gccggccagc ccagcgtgat caggcattgc ggcagccaat cgcgcgggag atcgagcgcc
     1801 tccaccacgg tatcgggaca gaacagcggc gcgcacagta cgcagctgcc gagcccttcg
     1861 ctctgtgccg ccaacatcag attctgcgcc gccatggccg tgctctgcac cgccatgaga
     1921 aattccgcct gcgcgcggcg ggaatcggga tagcgatcca tttcctgcat cgtcagcgcg
     1981 atgagaacga gcgccggcgc ttccgtcagc cgcgcgatcg agcgcgcggc gtcggcggcg
     2041 acgacctcgg gatcgtcgcc gtccgccagc cggtcgcgcc tgagccgcgc cgccatggca
     2101 tcggcaagcg ttcgacgctt cgtcggcgcc accgctgcga acctccaggg ttggcggttg
     2161 tgcgccgagg gcgcccaggt cgcgtgcgcc aggatgcgct cgaccagggc ctcatccacc
     2221 ggctccggcc ggtagcgccg gatcgaccgc cggctcatga caaggttcgc aaacgaattt
     2281 tcggctggcg cacgcgcgga agaaacagca ccgcgatcct tcgccggctc gacgacgccg
     2341 ggcgcatcga gcagcaaggt tgccgcatcg gcagtgaagt tcgccgtcaa gccgctacga
     2401 ctcctgccac cggcaccgcc gcagccttgg tgcggagttt cggcagcacg tgcttgctgt
     2461 agagttgaag aaagcgcttc tggtcggcgc ccggcgcgtg aaacaccaga tgccgaaagc
     2521 cgagcgcgac ataggtcatg atcttgtcga tatgctcgtc cgcatcgtcg gaaacgatcc
     2581 agcggctcgc cgcgcgctca atgggaagcg cggcggcaag gcgttcgatt tcgctgggat
     2641 cttcgaccga ggttttctcc tcaggagtaa gagcgagcgc cgcccaattg cgggtgtcct
     2701 ccatcgcccg gcggcgatcg gtatcgaacg acactttcac ctcgatcacg cggtcgaagg
     2761 acgaatccgc cctgctcgcc tgtgccagtc ccgccgccac gttgggcagc agcgtttccg
     2821 tatagagctc catcggcttg ccgctcgtac agatgaagcc gtcggcggaa cgcccggcgt
     2881 atttggcgac gagcgcgccg gcggcggcga catagatcgg caccggaact gccggccggt
     2941 catagatcgt ggcatttcgg gtacggtagt actcgccgtc gaaggtcacg cgttcctcgg
     3001 tccacagccg ccggatgagc gcaatcgact cgcgcagacg cgcgaaccgc tccttgaatt
     3061 ccggccacgg attgccggtc gccggaactt cattgagcga ctcgccggtg ccgaccccca
     3121 ggatcacgcg cccgggaaag aggcttccga gcgtgccgaa ggcctgcgcc acgatcgagg
     3181 ggtgatagcg gaacgtcggc gtgagcacgc tcgtgcccat cacgatccgt gacgttttgg
     3241 cccccaaggc accgagccaa gctagcgaga acggcgcgtg accgtccgtg tgcttccaag
     3301 gctgaaagtg atcgctgatg aaaacggaat cgaacccgac ttcttccgcg aggcaggcga
     3361 attcaaggag cgctgcaggg gcgaactgct ccgccgaagc cttgtatccg agtttcatca
     3421 atgcagcacc ggggcttgct cgtttgcgcg atgagcatgg gttctgtttc gggaatgtca
     3481 agcgaaggga tcgcagcgtt tacaagacct ccatgagttt ttgcgcgaca ttcagcggct
     3541 tcgggcttct gctttacagc cgttcttgtt gcgtctcgaa cgcccgcgtg gcacatcttc
     3601 gatcgcacaa cgccaagatt ttcaaatccg ctcatgcgcc tcaacgcttt ctttcccacc
     3661 cgtgatatcg gcaccgaccc ggcaaagatc cgcgattggg cgcaagccgc ggaggcgctt
     3721 ggatacgcgc atatcgaagt gcccgaccat gtgttcggtg cgaccgcgcg ggatggctgg
     3781 gtgccgatct acaatgagaa ggatgcgttc cacgagacct ttgtcacgat cggctttctc
     3841 gcagcggtga ccaagaccat cgggctcaca agcggggtct tgatttcgcc gcagcggcag
     3901 acggggctca ttgccaagca ggcggccgaa gccgacgtgc tcagtggcgg acgcatcagg
     3961 cttggcatcg gggtgggatg gaatcacgtc gaatacgaag ctctgggcat ggagtggaag
     4021 acgcgcgggg cgcggcaggc ggagcaggtc gaggtgctcc gccgcttgtg gtcggatgac
     4081 ctggtgagct tcagcgggcg gtttcaccag ctcaaggagg tcagcatttt gccggcgccg
     4141 gtgcagcgcc cgattccgat ctggttcgga ggatcgtcgg aagctgcggt gacgcgcgct
     4201 gcccggctcg gcgacggctg gatgccgatc atggcgcccg acgcagaagg cgaagagacg
     4261 ctggcgcgtc tgcgcgaaca gctcaaatcg ttcggacgcg accccgccaa gttcggcatc
     4321 gagggctggc tgcgcatgcg cgagtctgac ccgcaacgct gggcagccgc ggcggatggc
     4381 tggcgccggc tcggcgccga catggtgatg ctctacccca tgtaccggat cggcggcctc
     4441 gacgaccaca tcgagaccct gcggcgcttc aaggaggtgg ccggcggata gcatgaggcg
     4501 ctgccccatg cctccgcccg gccgcgagtg tcgagcgtgg ccggcccgcc cttcaactat
     4561 cttcccgtca cagtcgtgcc gcgacctcct cgcggaagcg cttcatgtcg gcgagcgtgc
     4621 gatccaccgt gtcgccgacg aagctcatat cgacggcggt gacgccgaga tcgcgaaacg
     4681 cgcgcaggtc gccggcaatc tccgccggtc caccggagaa cagccgccgc tcgccgtcat
     4741 cggccttggc gggaacgttg gcaccaaacc gctggatgcg atagccgatg gcgatctgcc
     4801 ggggatcgcg cccagcctcg gcgaccatcc ggcgcatgcg ctcgatgccg gcccgcatgc
     4861 ggggaagcga gtcgagcgga tgctgcgggt tggtgccaat cggataccag ccgtcgccta
     4921 gcttggcgac gcggcgcaag gccggcgggc tctcgccgcc gacccagagc ggcggatgcg
     4981 gcttctgcac cggcttgggc gccatgaaga tgttgctgaa gcggacatag cggccctcga
     5041 actgcggcgc gtccttggtc cagagctcgc ggaacgccgc catgtattca tcggtcacgg
     5101 cgccgcgctc ggcaaagggc ggcgtgccca cggcctcgaa ttcctccttc atccagccgg
     5161 cgccgacgcc gacggtaagc cggccgtttg acaggaggtc gatggtcgcg agcattttgg
     5221 cggtcagcac cgcggggcga tgcggcacga ctatcaccga ggtgaccatg cgcaggcgcg
     5281 aagtcttggc cgccacgaag gcggcggacg tgagctgctc gtaccagtcg gtccggccgc
     5341 ccgagggaaa ttcgcccgtc gtggaatagg gatagcgcgc ctctatgtcc ctggggatga
     5401 cgatgtgatc gctcagcgtc agataatcga agcccatggc ctcgccttcg atggcgaggc
     5461 gggtgatcgt ctgcggcgac gccagcgcgc cgcgtgtcgg caaatcaaaa ccaagcaaca
     5521 tgtgaatgct cccgaatgtg cgcgaggagt ctagcatggc ggccgaacgc gccagccaca
     5581 aggatggcgg ccaaacgcaa atgagcgcaa catctcgctc agccgacggg gccgccatgc
     5641 tcacctccca ccagcaacgt ttcctggaaa cgcgacgggt cgtccggctc gcgaccgccg
     5701 acgcgcgcgg cgcgccccat gtcgttccgg tgtgcttcgc ggttgccgac ggcaccctct
     5761 acgtgacgat cgacgagaag ccgaagcggc ggagcggcgc accgctcaag cgcctgcgca
     5821 atatcgcgga aaatcccgcg gtcgctgttg tcgccgacca ctacgatgag gactggacgc
     5881 ggctcggctg ggtgatgctg cagggacggg ccgacatcct ctcggtcggg gccgagcatg
     5941 cgcgcgccca ggcactgctg cgcgcgcgtt acccgcagct cggcccgatg agcatcgagg
     6001 cccttccagt catcgcggtg cgcgtggagc gcgtcgtgag ctggggcgat ctctctgtgg
     6061 ccgggcttgc ctcgcccgcg cagggcggac taaaccagga ctgagacgtg acgaccggat
     6121 ccgcgcgggt gagagcatgc acattggttt gacgatgttt ccgacggact attcgatcca
     6181 gccgaccgac ctggcgatgg aggcggaggc gcgcgatttc gaatcgctct ggcttcccga
     6241 gcacacccat atccctacca gccgcaagtc gccctggccg ggcggcgccg agctgccgaa
     6301 atactattac gacacctacg atccgttcct ctcgctcgcc gccgcggcgg cggtgacgaa
     6361 gaagatcaag ctcgcgaccg gcatctgcct cgtggtcgag cgcgatccga tccataccgc
     6421 gaaggaggtc tcgaccgtcg accggctttc cgccggccgc ttcatattcg gcatcggcgg
     6481 cggctggaac gccgaggaga tggccaacca cggcaccgac tttgcgacgc gtttcaagct
     6541 catgcgcgag cgcatcgagg cgatgaaggc aatctgggcg caatcgaagg cgaaatattc
     6601 cggcgagttc gtcaagatcg acgagatgat gcaatggccg aagccgatac agaaaccgca
     6661 tcccccgatc gttgtcggcg gcggctttcc gcacgccgcg aagcgcgcaa tcgcctatgg
     6721 cgacggctgg ataccgatcg gcggccgctc cgatccgctc gatgtgctgc cgcagttccg
     6781 ccagatggcg aaggacgccg gccgcgaccc cgcctcgctg tccttcgatg tattcggcgc
     6841 accgcgggat ctggaagcgc tgaagcgcta tcgcgacgcc ggcgtcgacc gcgccatatt
     6901 catgctgccg tcgaaatcac gcgacgaggt gctgccaatg ctcgaccagt ccgcggcgtt
     6961 ggtgaaaggg ctctgagcgc gggccctgcg aatcagcggc gcgaggccgc tgcggccgct
     7021 tcctcggaag caacggcaag ccgaacgaga atttcgttaa gggcgcctta atcgcgtgtg
     7081 gataagccac ttctgctcta cccccgaaag cggcatagcc cataccggtt tcatgcccgc
     7141 aatagctgac atcaagccgt cgcatgagca cagataatac ccaatgccgc atccgcctcg
     7201 atccacgacg atctgcgtat cttattggca tcctggccgg ctgaaggcat atattcaggc
     7261 atatattcag aaggcatgta tgcagatccg tatagctgct attccgcccg ccttggactc
     7321 gccgacgcaa ttcgcgttat cgaagcgttg aaggccgacc gctggatgcc tgacgctctt
     7381 gttcggttgc agatttgacc gccctgttgc gcaatgccgc ggcaaacggg ctcgaggttg
     7441 aggcgcgaca cgtccgcaat tgtagcggat aggtgcgtga ataatgtcag cgtccgacgg
     7501 cggcagacat tgagcggcga caaacattct gaggaaattg atctggatca agggcgaaat
     7561 aatttatgaa gaattttatc ctcttgaata aagctcaaac aaagcatttg ctaggataag
     7621 gcc
//
LOCUS       DATMQB010000294         5719 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_416237, whole genome shotgun sequence.
ACCESSION   DATMQB010000294 DATMQB010000000
VERSION     DATMQB010000294.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5719)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5719)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5719
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_416237"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..894
                     /gene="moeB"
                     /locus_tag="VNY79_08490"
     CDS             <1..894
                     /gene="moeB"
                     /locus_tag="VNY79_08490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006608920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-synthase adenylyltransferase MoeB"
                     /protein_id="HWX72523.1"
                     /translation="MLTPDELERYARHIVLQEVGGPGQAALGRARVLVIGAGGLGAPV
                     LLYLAAAGVGTLGVIDDDVVSLSNLQRQVIHATPDVGMPKVESAAALIRRLNPHVAVE
                     QHRVRLTAKNALDLIGRYDIVADGSDNFTTRYLVSDACYFARKPLVTAALGPFDGTLT
                     TIRAHERGTDGKPNPTYRCLFPEPPPPGTVPACAEAGILGALAGVIGSMAALEVIREI
                     VGFGEGLVGRLVMLDARAMRFETLRYGWDPENPLSGEQPTIRDLAADARIAAPVAAEA
                     TGEAEADDVPSTKGAARTPRG"
     gene            complement(943..1275)
                     /locus_tag="VNY79_08495"
     CDS             complement(943..1275)
                     /locus_tag="VNY79_08495"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72524.1"
                     /translation="MSLLLATSGMAAPAAKLSPDEIKATFFNGQPFTASTPSNVKFKM
                     TFTADGKMKRQPAGGGKKGEGTWKLSGDGFCRTWKGAKEECFTIVSAGANQWSVLKGS
                     GVVATWSK"
     gene            complement(1416..2054)
                     /locus_tag="VNY79_08500"
     CDS             complement(1416..2054)
                     /locus_tag="VNY79_08500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333449.1"
                     /note="This protein belongs to a clade of uncharacterized
                     proteins related to peroxidases such as the
                     alkylhydroperoxidase AhpD; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxidase-related enzyme"
                     /protein_id="HWX72525.1"
                     /translation="MPKRNSRAAPANRATTAPRSSAAADDDTDITALKLPPAPLSPEM
                     AAYFRKCEEKLGFVPNVLKAYSFDMAKLGAFVAMYNDLMLAPSGLSKLEREMIAVAVS
                     AYNRCYYCLVAHGASVRQLSGDPVLGELMVMNYRAARLTRRERAMLDFAVKLAAEPWL
                     VEEEDRDRLRRSGFSDRDIWDIGAVASFFNMSNRMAFATDMRPNSAYHAQAR"
     gene            2198..>5719
                     /locus_tag="VNY79_08505"
     CDS             2198..>5719
                     /locus_tag="VNY79_08505"
                     /inference="COORDINATES: protein motif:HMM:NF016944.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004352 - glutamate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0019551 - glutamate catabolic process to
                     2-oxoglutarate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-glutamate dehydrogenase domain-containing
                     protein"
                     /protein_id="HWX72526.1"
                     /translation="MARQGDVANMNVHDTLPAADGDRTRSALIGAAVAALAGRNRDIS
                     PDFVAQLFGHAVPEDFARYRPEELAGVAEQSWALLQERKPGAPKIRFEPAAAKPGVAV
                     LEIINDDMPFLVDSIVGEISERGLDIRLLVHPVFTVERSETWKLNAFHEAHKGNGRRE
                     SFIQIHVDDDGDAAARADLVRTLADILAEVRVCVQDWRPMLARLSEVTAELRAAPPPL
                     PADEIAEAIEFLQWIATDNFTLLGARDYAYTDSEHALEPRFDTGLGLLRSPEMRLLLR
                     GDQLVTATPEIREFLNEPKLIIMTKAAQRSRVHRRVDLDYIGVKHFDRDGKLVGEWRF
                     CGLLTSTAYTRSVRAIPYLRRKVDSIVERAGFDPNSHSGKALVNVLENYPRDELFQID
                     EDTLYQFALAILQLDERPRVRVLPRYDRFDRFVSVLVYVPRERYDSQIRARIGDYLAG
                     VFNGRVRAFYPFFPEGRLVRVHFIIARDEGATPKVDRASLDRAVEAIVRSWTDDIEEA
                     LAAAHEPKQARALLARYRDAFPIDYREVYPPATAIADIGAIEALTAERPLAVEFYREA
                     GMEPSCAGLKVFSASRPIPLSERVPVLENMGFSVVDERTYHIRPQDAADVWFHDMTIE
                     SASRQPFDVAALRERLEACVLAVARGQAESDGYNALVHVAGLPWRDVVLVRALSRFLR
                     QVRVPYSQDYMWATLRMHAGVATQIVSLFHTRFDPDLRAPADERTAREAFIAASIENA
                     LQSVESLDEDRILRRFVNAVQAAVRTDFYQRDRDGRPKELVAVKFASRKLDDIPPPRP
                     LYEIFVYAPRLEAVHLRFGKVARGGIRWSDRPQDFRTEILSLVKAQNVKNAVIVPVGA
                     KGGFVPKRLPVGGARDAVQAEGTEAYKLFISTLLDITDNIGTGTVGVVPPADVVRHDG
                     DDPYLVVAADKGTATFSDIANDIANGHDFWLGDAFASGGSAGYDHKKMGITARGAWES
                     VKRHFRELDVDIGKTPFTVAGVGDMSGDVFGNGMLRERTIKLVAAFDHRDIFIDPDPD
                     PERAFAERMRLFALPRSSWQDFDKTVISKGGGVFPRTAKEIRLSPEAQTLFGVGERLT
                     PPALIRAILKAPVDLLFFGGIGTYVRAADESDEAVGDRANDAIRIAGADLRCKVIGEG
                     ANLGMTQRGRIEAALRGVRLNTDAIDNS"
BASE COUNT          937 a         1955 c         1869 g          958 t
ORIGIN      
        1 atgctcacgc ctgacgaact cgagcgctac gcgcgccata tcgtactgca agaagtgggc
       61 ggccccggac aggctgcgct tggccgcgcg cgcgtgctgg tgatcggcgc cggcgggctt
      121 ggcgctccgg tgctccttta cctcgccgcc gcaggggtcg gcacgctcgg cgtcatcgac
      181 gacgacgtgg tctcgctgtc gaacctgcag cggcaggtta tccatgcgac gccggacgtc
      241 ggcatgccga aagtcgagag cgccgccgcc ctgatccgcc gcctcaatcc gcacgtcgcc
      301 gtggagcagc atcgcgtccg cctcacggcg aagaatgcgc tcgatctcat cggccgctac
      361 gatatcgtcg ccgacggctc ggacaatttc actacgcgct atctcgtctc cgatgcctgc
      421 tatttcgccc gcaagccatt ggtgacggcg gcgctcggcc cgttcgacgg tacgctcacc
      481 acgatccgcg cccacgagcg cggcaccgac ggcaagccga acccgaccta ccggtgcctg
      541 tttccggagc cgccgcctcc gggcaccgtg ccggcatgcg ccgaggcggg aatcctcggg
      601 gcgctcgcgg gcgtgatcgg ttcgatggcg gcactcgagg tgatccgcga gatcgtcggt
      661 ttcggcgaag gcctggtcgg ccgcctggtc atgctcgacg cccgcgcgat gcgtttcgag
      721 accttgcgct acggctggga tccggagaac ccgttgtccg gcgagcagcc gacgatccgg
      781 gatctcgcgg cggacgcgcg gatcgccgct cccgttgcgg cagaggcgac cggcgaagcg
      841 gaagccgacg acgttccgtc cacgaagggc gccgcgcgca cgccgcgcgg ctgaatagcc
      901 gaagctgtgc gcagacctct cccgcagcgg cgagcggacc tgctatttgc tccacgtcgc
      961 tacgacgccc gaacccttga gcaccgacca ctggttcgca ccggcgctga cgatcgtgaa
     1021 gcattcctcc ttggcgccct tccaggtacg gcagaatccg tcaccggaca atttccaggt
     1081 gccctcgccc ttctttccgc cgccggccgg ctggcgtttc atcttgccgt ccgcggtaaa
     1141 cgtcatcttg aatttgacat tggacggcgt cgacgcggtg aacggctgac cgttgaagaa
     1201 cgtggccttg atctcatccg gcgaaagttt cgctgcggga gcggccatgc cggatgtcgc
     1261 gaggaggagg ctcatggcgc cgatcgatac agcgctcgca atgtctgcac gcatcatgct
     1321 tccccttgct ctgattcgtc tgcgcgccat gatacgcgag cttccgcaca acgccgacga
     1381 gaatttcggc aggcccgata ggcggcgagg acggttcacc tcgcctgcgc gtgatacgcg
     1441 ctgttgggcc gcatgtcggt ggcaaacgcc atgcggttcg acatgttgaa gaagcttgcc
     1501 acggcgccga tgtcccagat gtcgcgatcg ctgaagcccg agcggcgcag gcggtcgcga
     1561 tcctcttctt cgacgagcca cggctcggcc gcgagcttga cggcgaagtc gagcatggcg
     1621 cgctcgcgcc gcgtcaagcg cgccgcccga tagttcatca ccatgagctc gccgagaacg
     1681 ggatcgccgg agagctgacg cacggaggcg ccgtgggcga ccaggcagta gtagcagcga
     1741 ttgtacgccg acaccgcgac cgcgatcatc tcgcgctcga gcttgctcag gcctgacggc
     1801 gccagcatca gatcgttgta catggcgacg aaggccccga gcttcgccat gtcgaatgaa
     1861 taggccttga gcacgttcgg aacgaacccg agcttctcct cgcacttgcg gaagtacgcg
     1921 gccatttccg gagagagcgg cgccggcggc agcttgagcg cagtaatgtc ggtgtcatcg
     1981 tcagccgctg cgctggagcg aggagcggtc gtggcgcggt tggcgggggc ggctcggctg
     2041 ttgcgcttgg gcatgaggat cccttccagg tcgtgcctgc cgacgctctg tcatgttgcc
     2101 gtcggcggca ctagctacgg tggcaataca ggcgacagta taaatgccgc gtggctgggg
     2161 cgtgcgttcc gtggataata cgcccgaaat cgcacccatg gcgcggcaag gcgacgtggc
     2221 gaacatgaac gtgcacgata ctctcccggc cgcggacggc gatcgcaccc ggtcggcgct
     2281 gatcggagcc gccgtcgcgg cgctcgccgg gcgcaaccgc gatatctcgc ccgatttcgt
     2341 cgcccagctg ttcgggcatg cggtccccga ggatttcgcg cgctaccggc cggaagaact
     2401 cgcgggcgtc gctgagcagt cgtgggcgct gctccaggag cgcaaacccg gcgcgccaaa
     2461 aatccgcttc gagccggccg cggcgaagcc gggcgtggcg gtgctcgaaa tcatcaacga
     2521 cgacatgccg ttcctggtcg actcgatcgt cggcgagatc agtgaacgcg gtctcgacat
     2581 ccgcctgctg gtccacccgg tattcacggt cgagcgcagc gagacgtgga agctcaacgc
     2641 cttccatgag gcgcacaagg gtaatggccg gcgcgaaagc ttcattcaaa tccatgtcga
     2701 tgacgacggc gacgccgcgg cgcgcgccga ccttgtgcgc acgctcgccg acatcctcgc
     2761 cgaggtgcgc gtgtgcgtgc aggattggcg gccgatgctg gctcgcctga gcgaggtcac
     2821 cgcggaactg cgcgccgcgc cgccgccgct gcctgccgac gagatcgccg aagcgatcga
     2881 gtttctgcag tggatcgcca ccgacaattt caccctgctc ggcgcgcgcg actacgccta
     2941 caccgacagc gagcacgcgc tcgagccgcg gttcgacacc ggcctgggcc tgctgcgctc
     3001 gccggaaatg cggctcctgc tccgcggcga ccagctcgtc accgccacgc cggaaatccg
     3061 cgagttcctc aacgagccga agctgatcat catgaccaag gcggcacagc gctcgcgcgt
     3121 gcaccgccgc gtcgatctcg attacatcgg cgtcaagcac ttcgaccgcg acggcaagct
     3181 tgtcggcgag tggcggttct gcgggctgct cacctcgacc gcttacacgc gctcggtgcg
     3241 cgcgattccc tatctgcggc gcaaggtcga cagcatagtc gagcgcgccg gcttcgatcc
     3301 gaacagccat tccggcaagg cgctggtcaa cgtcctcgaa aactatccgc gcgacgaact
     3361 attccagatc gacgaggaca cgctctacca gttcgcgctc gcgatcctgc agctcgacga
     3421 acggccgcgc gtgcgcgtgc tgccgcgcta cgatcgcttc gaccgcttcg tgtccgtgct
     3481 cgtctacgtt ccgcgcgagc gctacgacag ccagatacgg gcgcggatcg gcgactatct
     3541 cgccggcgtt ttcaacggtc gggtgcgcgc cttctatccg ttctttccgg aaggccggct
     3601 ggtgcgcgtc catttcatca tcgcccgcga cgaaggcgcg acgccgaagg tcgatcgcgc
     3661 ctcgctcgat cgcgccgtcg aggcgatcgt acgcagctgg acggacgaca tcgaggaagc
     3721 gctcgctgcc gcgcacgagc cgaagcaggc gcgcgcgctg ctcgcgcgtt atcgcgatgc
     3781 ctttccgatc gactaccgcg aggtctatcc gcccgcgacc gccatcgccg acatcggagc
     3841 gatcgaggca ctgacggcgg aacgcccgct cgcagtcgag ttctaccgcg aagccgggat
     3901 ggagccttcc tgcgccggtc tgaaggtctt cagcgctagc cggccgattc cgctttccga
     3961 gcgcgtgccg gtcctggaaa acatggggtt cagcgtcgtc gacgagcgca cctaccatat
     4021 ccggccgcag gacgcggcgg atgtctggtt ccatgacatg acaattgaga gcgcgtcgcg
     4081 gcagccgttc gacgtcgctg cgctcaggga gcggctcgaa gcgtgcgtcc tcgcggtcgc
     4141 gcgcgggcag gcggaaagcg acggctacaa cgcgctggtg cacgtggccg gcttgccctg
     4201 gcgcgacgtg gtgctcgtac gcgcgctttc gcgcttcctg cggcaggttc gagtccccta
     4261 ttcgcaggac tatatgtggg cgacgctgcg catgcatgcc ggcgtcgcga cgcagatcgt
     4321 cagcctgttc catacgcgct tcgatccgga tctgcgcgca ccggcggacg aacgcaccgc
     4381 gcgcgaggct ttcatcgccg cctcgatcga aaacgccctg caatcggtcg agagcctcga
     4441 cgaagaccgc atcctccgcc gcttcgtcaa tgcggtgcag gcggcggtgc gcaccgattt
     4501 ctatcaacgc gatcgtgacg gccggcccaa agagcttgtc gcggtcaagt tcgcaagccg
     4561 caagctcgac gacatcccgc cgccgcggcc gctctacgag atcttcgtct acgcgccgcg
     4621 gctcgaagcc gtgcatctgc gcttcggcaa ggtggcgcgc ggcggcatcc gctggtccga
     4681 ccggccgcag gatttccgca ccgaaatcct cagcctggtg aaggcgcaga acgtgaagaa
     4741 tgccgtgatc gtgccggtcg gcgccaaggg cggcttcgtc cccaagcgtc tgcccgttgg
     4801 cggggcccgc gacgccgttc aagcggaagg aaccgaggcc tacaagctct tcatctcgac
     4861 gctgctcgac atcaccgaca atatcggcac ggggacggtg ggcgtcgtgc cgccggccga
     4921 cgtggtccgc catgacggcg acgatcctta tctggtggtc gccgccgaca aagggacggc
     4981 gacgttctcc gacatcgcca acgacatcgc caatgggcac gatttctggc tgggcgatgc
     5041 cttcgcctcc ggtggctccg ccggctacga tcacaagaaa atgggcatca ccgcgcgcgg
     5101 cgcctgggaa tcggtgaaac gtcatttccg cgagctcgac gtcgatatcg gcaagacgcc
     5161 gttcaccgta gccggcgtcg gcgacatgtc gggcgacgtg ttcggcaacg gcatgctgcg
     5221 cgagcgcacg atcaagctcg tcgccgcgtt cgaccaccgc gacatcttca tcgatccgga
     5281 ccccgatccg gagcgcgcct ttgccgagcg gatgcggctg ttcgcgctgc cgcggtcgag
     5341 ctggcaggat ttcgacaaga ccgtcatctc caagggcggc ggcgtctttc cgcgcaccgc
     5401 caaggagata cggctatcgc cggaggcgca gacactgttc ggtgtcggcg agcggctcac
     5461 cccgccggcg ctgatccgcg ccatcctcaa agccccggtc gaccttctct tcttcggcgg
     5521 catcggcacc tatgtgcgcg ccgcggacga aagcgacgag gcggtcggcg accgcgccaa
     5581 tgacgccatt cgcatcgccg gcgccgacct gcgctgcaag gtgatcgggg aaggcgccaa
     5641 cctcggcatg acccagcgcg gccgcatcga ggcggcgttg cgcggcgtca ggctcaacac
     5701 cgacgccatc gacaattcg
//
LOCUS       DATMQB010000295         2312 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2281087, whole genome shotgun sequence.
ACCESSION   DATMQB010000295 DATMQB010000000
VERSION     DATMQB010000295.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2312)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2312)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2312
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2281087"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1002)
                     /locus_tag="VNY79_08510"
     CDS             complement(<1..1002)
                     /locus_tag="VNY79_08510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009737057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase family protein"
                     /protein_id="HWX72527.1"
                     /translation="MKILSCRDRLEHALFRIAEPDGEGMRACLTVYSEAARAAADAAD
                     ARAALGISLGPLDGVIVSIKDLFDVAGEPTRAGSKVLAEEAAPAIADAPVVRRLRAGG
                     AVILAKTNMTEFAFGAVGANPHFGTPGNPADRTRVPGGSSSGAAVTAADGMCEIAIGT
                     DTGGSVRIPAALCGIVGFKPSRQRIPTDGAFPLSYSLDSVGPLARSVADCAKADAVMA
                     GEEFVALEPVALAGLWFGLAEGLPLDRLDEIVASAFDTALKRLDAAGVRIGREKISLL
                     DDMAGVNAYGGVVQPEACAIHRQRLERRGQDIDPNVRVRIERGCTVSGADYVDMQRQR
                     "
     gene            1111..2001
                     /locus_tag="VNY79_08515"
     CDS             1111..2001
                     /locus_tag="VNY79_08515"
                     /inference="COORDINATES: protein motif:HMM:NF015411.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1932 domain-containing protein"
                     /protein_id="HWX72528.1"
                     /translation="MKPAICFIGFGEAGRAIAAGLREAGAGRMTAWDILFPEPAGERL
                     RHAGETTGVRGASSAGDAARESQIVISAATAAASVAAAQSVKAHLAGQPFLLDINSVS
                     PGRKQETAKLLGDSARYLDVAVLAPIHPARHQTPMLLAGPHAAAVAPMLAALGMRAYI
                     AGTEVGAAAAIKMVRSVIVKGIEALTLECFLAAARAGVVDEVANSLKNNYPGLDWSKI
                     VPYNLERMAVHGERRAAEMEEVAETLRELGVEPLMTLATVKRQREMGQVGAQAPVREV
                     LHQDRTAILSAISAAARDRH"
     gene            complement(2030..>2312)
                     /locus_tag="VNY79_08520"
     CDS             complement(2030..>2312)
                     /locus_tag="VNY79_08520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009451197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HWX72529.1"
                     /translation="ENGACFDDRVDADGTVHDDDRIAFLRDHLAAAHRALADGVNLRG
                     YFVWSLLDNFEWAEGYTRRFGVVRVDFASLKRTPKASFAFLADTIRRRG"
BASE COUNT          392 a          777 c          808 g          335 t
ORIGIN      
        1 gcgttggcgc tgcatgtcga cgtagtcggc ccccgaaacg gtgcagccgc gctcgatgcg
       61 cacccgcaca ttcggatcga tgtcttgacc gcgccgctcg aggcgctgcc gatggatggc
      121 gcaagcttcg ggctgcacga cgccgccgta ggcgttgacg ccggccatgt cgtcgagcag
      181 cgatatcttt tcccgtccaa tgcgcacgcc ggcggcatcg agccgcttca gcgccgtatc
      241 gaacgccgac gccacgatct catccaaccg gtcgagcggc agaccctcgg caaggccgaa
      301 ccacagaccg gcgagcgcga ccggctcgag cgccacaaat tcctcgcccg ccatgacggc
      361 atcggccttg gcgcaatcgg cgacgctgcg agcgagcggc ccgacggaat cgagcgaata
      421 gctcagcgga aatgcgccat cggtggggat gcgctgccgg ctcggcttga agccgacgat
      481 gccgcagagc gccgccggga tgcgcaccga gccgccggta tcggtcccga tggcgatctc
      541 gcacatgccg tcggcggcgg ttaccgcggc gccggacgag gacccgcccg gcacgcgggt
      601 acggtcggcc ggattgccgg gcgtgccgaa atgcggattg gcgccgacgg cgccaaaggc
      661 gaactcggtc atgttggtct tggcgaggat gacggcgccg ccggcacgca gccggcgtac
      721 gaccggcgca tcggcaatcg ccggcgccgc ctcctcggca agaactttcg agccggcgcg
      781 ggtcggctcg ccggcgacat cgaacaaatc cttgatgctg acgatcacgc cgtcaagcgg
      841 gccgagcgag atgccgagag ccgcccgcgc atcggcggcg tcggcggccg cacgcgccgc
      901 ctcagaatag accgtgagac aggcgcgcat cccctcaccg tccggctcgg caatgcggaa
      961 cagcgcatgt tcgagacgat cgcggcagga aaggattttc atcggtgcgt cttgctgttg
     1021 cggcgggtgg cgtgatgcca ttgcggacca tacaccgatc ctgccatcat cggcgagtgc
     1081 cgatgttgaa gaggcgatga cgatggagac gtgaagccgg caatctgctt catcggtttc
     1141 ggcgaagcgg gccgggcgat cgccgccgga ctgcgcgagg ccggcgccgg gcggatgacg
     1201 gcgtgggaca ttctgtttcc cgagcccgcg ggcgaacggc tcaggcacgc cggcgaaacg
     1261 accggcgtcc gcggtgcttc ctccgccggg gatgccgcac gcgagtcgca gatcgtcata
     1321 tccgccgcca ccgcggccgc gagcgtcgcc gcggcacaat cggtcaaagc gcacctcgcc
     1381 ggccagccgt ttctgctcga catcaactcc gtctcgcccg ggcgcaaaca ggagactgcc
     1441 aagctccttg gtgacagtgc ccgctacctc gatgtcgcgg tgctcgcgcc cattcatccg
     1501 gcgcggcacc agacgccgat gctgctcgcc ggaccgcatg ccgcggcggt cgcaccgatg
     1561 ctggccgcac tgggcatgcg cgcgtatatc gccgggaccg aagtcggcgc cgcggcggcg
     1621 atcaagatgg tgcgcagcgt gatcgtgaag gggatcgagg cgctgacgct cgagtgcttt
     1681 ctcgctgccg cgcgcgccgg cgtcgtggat gaggtcgcga actctttgaa gaacaactat
     1741 ccgggcctcg attggtcgaa gatcgtcccc tacaatcttg aacgcatggc ggtgcacggc
     1801 gagcgccgcg ccgccgaaat ggaagaggtc gcggaaacgc tgcgcgagct cggcgtcgag
     1861 ccgctgatga cattggcgac ggtgaagcgc cagcgcgaga tgggtcaggt cggcgcacag
     1921 gcaccggtgc gcgaggttct ccaccaggac cgcacggcga tcctgagcgc gatcagcgcg
     1981 gccgcgcgcg accgacactg atctcaacga ccctttcatt gcccccggtt cagccgcggc
     2041 ggcggatggt gtcggcgagg aaggcgaagg acgccttggg cgtacgcttg agcgacgcga
     2101 aatcgacgcg gacgacgccg aaccggcggg tgtagccttc ggcccactcg aagttgtcga
     2161 gcagcgacca cacgaaatag ccgcgcaggt tgacgccgtc ggcgagcgcc cgatgcgccg
     2221 cggcgagatg atcgcgcagg aacgcgatgc ggtcatcgtc atgcacggtg ccgtcggcat
     2281 cgacgcggtc gtcgaagcac gcgccgttct cg
//
LOCUS       DATMQB010000296         2852 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3524253, whole genome shotgun sequence.
ACCESSION   DATMQB010000296 DATMQB010000000
VERSION     DATMQB010000296.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2852)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2852)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2852
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3524253"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..159)
                     /locus_tag="VNY79_08525"
     CDS             complement(<1..159)
                     /locus_tag="VNY79_08525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate/arogenate dehydrogenase family
                     protein"
                     /protein_id="HWX72530.1"
                     /translation="MFGRLALVGVGLIGSSIARAARAQGVVGEIVATARSAATRRRVV
                     ELGLADRVV"
     gene            complement(182..1282)
                     /locus_tag="VNY79_08530"
     CDS             complement(182..1282)
                     /locus_tag="VNY79_08530"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004400 - histidinol-phosphate
                     transaminase activity [Evidence IEA];
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HWX72531.1"
                     /translation="MNAYPKPRPGVLDIEAYVPGKSSAAGVAKVFKLSSNETPLGPSP
                     RAVAAYKAVGAHLEDYPDGAASDLRDAIGRAFGLDPDRIVCGAGSDDLLNLLARAYLA
                     DGDEAIHTTHGFLVYPIATRGTGATPVVAPETACTASVDAILGCVTRKTKVVFLANPN
                     NPTGTYVSFDEVKRLHRSLPPQVLLVLDAAYAEYVRRNDYESGIELVATSENVVMTRT
                     FSKIHGLAALRLGWMFGPAHVVAAVNRVRGPFNVNAPAIAAGIAAIEDAEHQERAREH
                     NAHWLAWLTAEIEKLGLKVTPSVANFVLIHFPEAKGRTAKDADVFLTARGLILRQVGA
                     YKLPNALRMSVGSEEANRLAVASLRDFLARAA"
     gene            complement(1442..2287)
                     /locus_tag="VNY79_08535"
     CDS             complement(1442..2287)
                     /locus_tag="VNY79_08535"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0046417 - chorismate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HWX72532.1"
                     /translation="MPKPPHQQPMSLADLRRDIDRIDEAMHALLIDRGEIIDRLIAVK
                     KTQESGSAFRPAREADMMRRLVQRHHGSLPLDTVESIWRVIISTFTYVQAPFAVRADL
                     SAGDALMRDTARFHFGFTVPFVAHMGAASVVEAVSESKGDLGLVPAFAIAGAGPWWTA
                     LEFAAAPKIIARLPFVERSDHPAGMPVFVISRVAADAMVTETEVWSVRVSGWSAASVD
                     SLAGLADAIAVPDRAFDGAALLVSVAQGGIDPVADALLRTGASIRSRALVGSHATRYT
                     VPPKQ"
     gene            2457..>2852
                     /gene="metX"
                     /locus_tag="VNY79_08540"
     CDS             2457..>2852
                     /gene="metX"
                     /locus_tag="VNY79_08540"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665723.1"
                     /note="Catalyzes the conversion of acetyl-CoA and
                     L-homoserine to CoA and O-acetyl-L-homoserine; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HWX72533.1"
                     /translation="MAEAYATLDRADRKREADHPHSLLVRFPANNPLRLDAGVDFAPL
                     QIAYQTYGTLNAARSNAVLVSHALTGDQHVVNEHPVTGKPGWWDTMVGPGRPIDTERY
                     FVICPNVVGGCMGSSGPASTNPATGMPWGL"
BASE COUNT          475 a          970 c          970 g          437 t
ORIGIN      
        1 gacgacccgg tccgcgaggc caagctcgac gacgcgtcgc cgcgtcgccg ctgagcgcgc
       61 agtggcgacg atctcgccca ccacgccctg cgcgcgcgcc gcccgcgcga tcgaggagcc
      121 gatgaggccg acgccgacca atgccaggcg tccgaacagc ggagcggatt tggtcacagc
      181 gtcacgccgc ccttgccagg aaatccctga gcgacgccac cgccaggcgg ttcgcctctt
      241 cgctaccgac gctcatgcgc agcgcgttcg gtagcttgta ggcgccgacc tggcgcagga
      301 tcaatccgcg cgcggtgaga aaaacatccg cgtccttggc ggtgcggccc ttcgcttccg
      361 gaaagtggat cagcacgaag ttggcgacgc tcggggtcac cttcagcccg agcttctcga
      421 tctcggccgt gagccaggcg agccagtgcg cattgtgctc gcgcgcgcgc tcctggtgct
      481 ccgcgtcctc gatcgcggcg atgccggcgg caatcgccgg cgcattgacg ttgaacggtc
      541 cgcggacgcg gttgacggcg gcgacgacat gcgcgggccc gaacatccat ccgaggcgaa
      601 gggcggcaag accgtggatc ttggagaacg tgcgggtcat gacgacgttc tcgctggtgg
      661 cgacgagctc gatgccggac tcgtagtcgt tgcgccggac gtattcggcg taggcggcgt
      721 cgagcacgag cagtacctgc ggcggcaggc tgcggtgcag ccgcttgacc tcgtcgaagg
      781 agacgtaggt gccggtcgga ttgttcggat tggcgaggaa gaccactttc gtcttcctgg
      841 tcacgcagcc gaggatcgca tcgacgctcg ccgtacaggc ggtctccggc gcgacgaccg
      901 gcgtagctcc ggtgccgcgc gtcgcgatcg gataaacgag aaagccgtgc gtggtgtgaa
      961 tcgcctcgtc gccgtcggcg agataggcgc gcgccagcaa attcaacaga tcgtcggagc
     1021 cggcgccgca gacaatgcgg tccggatcga gcccgaaggc gcgcccgatg gcatcgcgca
     1081 ggtcggacgc cgcgccgtcg ggatagtctt caaggtgcgc gcccaccgcc ttgtaggccg
     1141 cgaccgcacg cggacttggt ccgagcggcg tctcgttcga cgacagcttg aacaccttgg
     1201 cgacacccgc cgcgctgctt ttgccgggca cgtaggcctc gatgtcgagc acgccgggcc
     1261 ggggtttcgg gtatgcgttc attgtcattc gctcgtgtct tcttgtccgc ctccgccaag
     1321 cgcggggagg ggcggctgca tgaactcgtg cgcaagcctt gactgatcct gaccggcgtg
     1381 ccggccactc cggcccggga ctcgttggtt cgccacctcc cccgcgagcg ggcggaggaa
     1441 attattgttt cggcggcacc gtataacggg tcgcgtggct gccgacgagg gctctcgagc
     1501 ggatggaggc gcccgtgcgg aggagggcat ccgcaacagg gtcgatcccg ccctgggcga
     1561 ccgagacgag caaggccgcg ccgtcgaagg cgcggtcggg gaccgcgatc gcgtccgcga
     1621 gcccggccag actgtccacc gacgccgcgc tccagccaga gacgcgcacg ctccagacct
     1681 cggtctcagt caccatcgcg tcggcggcga cgcgcgagat cacgaacacc ggcatcccag
     1741 ccgggtgatc ggaacgctcg acgaacggca gccgcgcgat gattttcggc gcggcggcaa
     1801 attccagcgc cgtccaccac ggcccggcgc cggcgatggc gaaggcggga acgaggccga
     1861 gatcgccttt cgattccgag accgcctcga cgacgctcgc cgcgcccatg tgcgcaacga
     1921 acggcacggt gaagccgaaa tggaagcgcg cagtatcgcg catgagcgcg tcgccggcgg
     1981 agaggtcggc gcgcaccgcg aacggcgcct gcacataggt gaaggtcgaa atgatgacgc
     2041 gccagatact ttcgaccgtg tcgagcggaa ggctgccgtg gtggcgctgc accagccggc
     2101 gcatcatatc ggcctcccgc gccgggcgaa acgccgagcc ggattcctgg gtcttcttca
     2161 ccgcgatcag gcggtcgatg atctcgccgc ggtcgatcag gagcgcgtgc atcgcctcgt
     2221 cgatgcggtc gatgtcccgg cgcagatcgg caagcgacat tggctgctgg tgcggtggct
     2281 tcggcattgg tccggctcgg cgcctcaaaa acgcgctgat tgataggagc ggccaagggt
     2341 gaaagcaaag gaaaatcaaa gaccaatcga gtaaatcgtt gactccgccg gcgagcggcc
     2401 tatttacgcc ccttcgaccg ccaaagcggc ggggcgccac aacgccggga agcgccatgg
     2461 ctgaagccta cgccacgctc gatcgcgccg accgcaagcg cgaggcggac catccgcatt
     2521 cgctgctcgt gcgttttccc gccaacaatc cgttgcggct cgatgccggg gtcgacttcg
     2581 ccccgctgca gatcgcctat cagacctacg gcacgctcaa cgccgcacgc agcaatgccg
     2641 tcctcgtctc ccacgcgctc accggcgatc agcatgtcgt caacgagcat ccggtgaccg
     2701 gcaagccggg ctggtgggac accatggtcg ggcccggccg gccgatcgac accgagcgct
     2761 atttcgtcat ctgccccaac gtcgtcgggg gctgcatggg ctcgtccggc cccgcctcca
     2821 ccaaccccgc caccggcatg ccgtggggcc tc
//
LOCUS       DATMQB010000297         6819 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4447398, whole genome shotgun sequence.
ACCESSION   DATMQB010000297 DATMQB010000000
VERSION     DATMQB010000297.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6819)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6819)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6819
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4447398"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..523)
                     /locus_tag="VNY79_08545"
     CDS             complement(<1..523)
                     /locus_tag="VNY79_08545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HWX72534.1"
                     /translation="MTVLERAAILPASFAAWFASRGWVPRPHQLDLLAKAQAGRSVLL
                     IAPTGGGKTLAGFLPSLVALSAAAPRTRTPATNPASSRLISTGRDLRREGGLHTLYIS
                     PLKALAVDVARNLETPVAEMRLPIRIETRTGDTPTSKRQRQRRDPPQILLTTPEQLAL
                     LLASADAPYLFGSL"
     gene            complement(595..1575)
                     /locus_tag="VNY79_08550"
     CDS             complement(595..1575)
                     /locus_tag="VNY79_08550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HWX72535.1"
                     /translation="MTDTGPLFASSGDLIADRRYRWALDLAARGELAGAADVLKQTVA
                     LAPTFAAAWAALGALRDQLGDRSGAIAAFETARDSDPEDFHGARLQLARLGAGDAAPR
                     MTDAYVRRLFDQYAARYDTALAEQLAYRGPELLRRAVDAVMTAAGRAMRFGAVLDLGC
                     GTGLCGAAFRRHADWLAGVDLSPAMIAQATVKGLYDRLVTGQLEAFLADEAASGGKYH
                     LVLAADVFVYLNDLAPAMAAIAHVLAPAGIVAFTVERPAEHGVKLLPTLRYAHAETYV
                     RETLGAAGLAVAHLADTPVRSEKGVPVDGLVVVAQPRPAHSRERGNPLPE"
     gene            1730..2875
                     /locus_tag="VNY79_08555"
     CDS             1730..2875
                     /locus_tag="VNY79_08555"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ligase-associated DNA damage response
                     exonuclease"
                     /protein_id="HWX72536.1"
                     /translation="MRAEDVLALTASGVCCKLGDFYIDPTRPVERALITHGHSDHARA
                     GHGAVLATQETLDLMRLRYGENFAGSIQAIGYGESVSLGGAKVTFHPAGHVLGSAQIL
                     VEANGLRIVASGDYKNVPDPTCTPFELVACDVFITEATFALPVFRHGDPDEQIAKLLH
                     SVALFPERAHLVCAYSLGKAQRVIALLRKVGYDAPIYLHGAMERITRYYSSRGIALGE
                     LRLVRGEKKAELAGTITLCPPSALREIWARRFPEPVTAFASGWMRVRARARQNGVELP
                     LVISDHADWDGLLMTIAATGAGEIWVTHGQEDALVHWCTARGLKARPLDIVGYGDEDE
                     ESPTRAPAEGRSLEAAAGDGAAPAFMVDMDTGQSLRGFRNDGGGEEP"
     gene            2872..4680
                     /locus_tag="VNY79_08560"
     CDS             2872..4680
                     /locus_tag="VNY79_08560"
                     /EC_number="6.5.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007599381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003910 - DNA ligase (ATP) activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cisplatin damage response ATP-dependent DNA
                     ligase"
                     /protein_id="HWX72537.1"
                     /translation="MNHFAELLDRLTYEQSRNNKLRLMTDYFRSTADPERGWALGALT
                     GVLSFPHAKPGLIRSLIAERTDPVLFELSYDYVGDLSETVALMWPVPAAARTPSPLVG
                     EGRGGGSGGVSSTSTMVRHPIPGPSPQACDRARDKRGPVEEGEEKNQEKLTLSVIIET
                     LSTLGKTELPRQLARWLDALDETGRWALIKLVTGGLRVGVSARLAKAAVAALGATDAR
                     DIELLWPGLAPPYIALFAWLEGRAEKPASADPAPFRPPMLAHALEDTDLAALDPAEFM
                     AEWKWDGIRVQAAAARRDGAIIARLYSRTGEDISKSFPDLVDALRLPGAIDGELLIMR
                     DSRVQSFNVLQQRLNRKTVTDKLMAEFPPHLRAYDLLADGEEDLRQLPFAERRRRLEE
                     FITRLGEPRIDLSPLVSFATWDDLMAARKDPAAAGAGIDAEAVEGVMLKRRDALYVPG
                     RPKGPWWKWKRDPLIIDAVLMYAQRGHGKRSSYYSDYTFGVWTRGEDGDELVPVGKAY
                     FGFTDEELLQIDRYVRRNTTDRFGPVREVVHEPDQGLVLEVAFEGLQRSTRHKSGLAM
                     RFPRINRLRWDKPPGEADRLELLETLIARIEQGRMS"
     gene            4677..5216
                     /locus_tag="VNY79_08565"
     CDS             4677..5216
                     /locus_tag="VNY79_08565"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0016747 - acyltransferase activity,
                     transferring groups other than amino-acyl groups [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HWX72538.1"
                     /translation="MTAPSPPSSAAITVRRARADDLAALVAMEQAAFTVDHLSRRSFR
                     RFLVSPSATFLVAEEGGKLAGYALVLYPLRSKLARLYSIAVAPHSGQRGVGPFLLAAA
                     EEAARRRRRRAMRLEVHEHNTRAIARYEKSGYRLFGRHRDYYDDHGDALRFEKPLDAV
                     PPTAAEQAKGGLHPRANRL"
     gene            5372..>6819
                     /locus_tag="VNY79_08570"
     CDS             5372..>6819
                     /locus_tag="VNY79_08570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013896362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RimK family protein"
                     /protein_id="HWX72539.1"
                     /translation="MTGWVILVDQPRDLPNAETPHKVITTTEYLARPRLFEVGRPKLV
                     NLARSYAYQSKGYYASLLAEARGHRVVPTVETMLELREQKLYEHALPELEDELNRCAR
                     RADFQPDAELKLLVCFGIARDERFESFGRLLFDWFRCPALEVIVDPGDWLSIDRIRPR
                     NITRLANGEGEFFRESLHNHTKRDWRDPKARTVAKYDLAVLYDANEKMAPSSPASIKH
                     FARIAEKHSVDVEPITKRQLAELAEFDGLFIRETTSIDNHTYRFARRAWQEGMPVIDD
                     PISMIRCTNKVFLMELLGQNQVPTPPTVIIAEDTDLTKPIDELGLPLVVKIPDGSFSR
                     GVHKIESLTGFKRVCDELFEETDLLLAQKFLPTEFDWRVGVLAGEPLFVCQYRMARGH
                     WQIVKHRADGSSREGGFKTFDVDQAPPALIDIVVRAARPIGDGFYGVDVKQTDKGFIV
                     MEVNDNPNLEHGIEDVVGRDEIWVRLLKWFIER"
BASE COUNT         1121 a         2285 c         2311 g         1102 t
ORIGIN      
        1 tgagcgagcc gaacagatag ggcgcgtcgg cggaagcgag caggagcgca agctgctcgg
       61 gcgtggtgag caggatctgc ggcggatcgc ggcgttggcg ttggcgcttc gaggtcggcg
      121 tgtcgccggt gcgtgtttcg atgcggatcg gcagccgcat ctcggcgacc ggcgtttcca
      181 ggttacgcgc aacatcgacg gcgagcgcct tcagcggcga aatataaagc gtgtgcaggc
      241 cgccttcgcg gcgcaggtct cggccggtgg agatcaggcg gctagacgcg gggtttgtag
      301 ctggggtccg cgtccgcggc gccgccgcgc tcagcgccac caggctcggc agaaagccgg
      361 cgagggtctt gccgccgccc gtcggcgcaa tcagcagcac cgagcggccg gcctgcgcct
      421 tggccagaag gtcgagctga tgcgggcgcg ggacccagcc gcggctggcg aaccaggcgg
      481 cgaacgatgc cggcaggata gcggcgcgct cgagcacggt catgggggtc ggctcgctcg
      541 gggcattttc cgctcgccac cgccctggcg gcgccggcgg gttcgtcgtc tcgctcactc
      601 aggtagtgga ttcccgcgtt cgcgggaatg agcgggccta ggctgtgcga ccacgacgag
      661 gccatcgacc ggcacgcctt tttcgctgcg caccggggtg tcggcgagat gcgcgacggc
      721 aaggccggcg gcgccaagcg tttcgcgcac gtaggtttcc gcgtgggcgt agcgcagcgt
      781 cggcagcagt ttcacgccat gctctgcggg cctctcgacc gtgaaggcca cgatgcctgc
      841 gggcgcgagt acatgcgcga tcgcggccat ggcaggtgcg aggtcattga gatagacgaa
      901 cacgtcagcc gccagcacga ggtggtattt tcccccgctc gccgcctcgt cggccagaaa
      961 tgcttcgagc tggccggtga cgaggcggtc gtaaaggcct ttcacggtcg cctgcgcgat
     1021 catcgccggc gagaggtcga caccggccag ccaatccgcg tgccggcgaa aggcggcgcc
     1081 gcaaagtccg gtgccgcagc cgagatcgag cacggcgccg aaacgcattg cccgcccggc
     1141 ggctgtcatc acggcgtcga cggcacgacg cagcagctcc ggcccgcgat aggcgagctg
     1201 ttcggcgagt gccgtgtcgt agcgggcggc atactgatcg aacaggcgtc ggacatacgc
     1261 gtcagtcatg cgcggcgcgg cgtcgccggc cccgagccgg gcgagttgga gccgcgcgcc
     1321 gtgaaagtcc tccggatcgg agtcgcgcgc cgtttcgaaa gcggcaatcg cgccgctccg
     1381 atcgccgagc tggtcgcgaa gcgcgcccag cgcggcccag gccgcagcga atgtgggcgc
     1441 cagcgcgacg gtctgcttga gaacatcggc ggcgccggca agctcgccgc gcgcggcaag
     1501 gtcgagcgcc cagcggtagc gccggtcggc gatgaggtcg ccggaagagg caaagagcgg
     1561 gccggtatca gtcattgcgt cattccgggc gcgcagcgtg agcccggaat ccataaccac
     1621 cgggcaacag atagcgcaaa gagtgacgag gggttgcgcc agccgccttg cggcttcccg
     1681 aacggcgccc gagggtgcgc gacatcaacg aacaacatat gtgacggcga tgcgtgctga
     1741 agacgttctc gcgcttacag cctcgggcgt atgctgcaag ctcggcgatt tttacatcga
     1801 cccgacccgg ccggtcgaac gggcgctgat cacgcacggc cattccgacc atgcgcgcgc
     1861 cggtcatggc gcggtgctgg cgacgcagga gacgctcgat ctcatgcggc tgcgctacgg
     1921 cgaaaacttt gccgggtcga tccaggcgat cggctacggc gaaagcgtga gcctcggcgg
     1981 cgcgaaagtc acgttccacc cggccggcca tgtgctcggt tcggcccaga tcctggtcga
     2041 ggcgaacggc ctgcgtatcg tcgcctcggg cgactacaag aacgttcccg acccgacctg
     2101 cacgccgttc gagctcgtcg cctgcgacgt gttcatcacc gaagccacct ttgcgctgcc
     2161 ggtgttccgc cacggcgacc ccgacgagca gatcgcgaag ctgctccatt cggtcgcgct
     2221 ctttcccgag cgcgcccatc tcgtgtgcgc ttattcgctc ggcaaggcgc agcgcgtgat
     2281 cgccctgttg cgcaaggtcg gctacgacgc gccgatctat ctgcacggcg ccatggagcg
     2341 catcacccgc tactactctt cccgcggcat cgcgctcggc gagttgcgcc tggtgcgcgg
     2401 cgagaaaaag gccgaactcg ccggcaccat cacgctgtgt ccgccctcgg cgttgcggga
     2461 gatttgggcg cggcgtttcc cggagccggt caccgcgttc gcctccggct ggatgcgggt
     2521 tcgggcgcgg gcgcgtcaga atggcgtcga actgccgctg gtcatttccg atcacgccga
     2581 ttgggacggc ctgctgatga cgatcgccgc gaccggcgcg ggcgagatct gggtgacgca
     2641 tggccaggag gacgcgctgg tgcactggtg caccgcgcgc ggcctcaagg cgcggccgct
     2701 cgatatcgtc ggctatgggg acgaggatga agaatccccc actcgggcgc cggccgaagg
     2761 ccgcagcctg gaagccgcgg ccggtgacgg tgcggctcct gcattcatgg tggatatgga
     2821 taccggacaa tctcttcgcg gtttccggaa tgacggcggt ggcgaagagc catgaaccac
     2881 ttcgccgagc tgctcgaccg tctcacctac gagcagagcc gcaacaacaa attgcggctg
     2941 atgacagatt atttccgctc gaccgccgat cccgagcgcg gctgggcgct cggtgcgctc
     3001 accggcgtac tgagcttccc gcatgccaag cccggcctca ttcgcagcct gatcgccgag
     3061 cgtaccgatc cggtgctgtt cgaactctcc tacgattatg tcggcgacct gtcggagacc
     3121 gtggcgctga tgtggcctgt gccggctgcg gcgcgaactc cctcccccct tgtgggggag
     3181 ggtcggggag gggggtcggg aggcgtctcg tcgacgtcga cgatggtgcg tcaccccatc
     3241 cctggcccct ctccacaagc ttgcgatcgg gcgcgggaca agcgcggccc cgttgaggaa
     3301 ggggaagaaa agaaccaaga aaagctcacg ctctcagtca tcatcgaaac cctctccacg
     3361 ctcggcaaga cggagctgcc gcggcaactc gcacgctggc tcgacgcgct cgacgagacc
     3421 gggcgctggg cgctgatcaa gctcgtcacc ggcggcctgc gggtcggcgt ttcggcgcgg
     3481 ctcgccaagg ccgcggtcgc ggcacttggg gcgacggatg cgcgcgacat cgaactgctc
     3541 tggcccgggc tcgcgccgcc ctacatcgcg ttgttcgcct ggctcgaagg ccgcgcggaa
     3601 aaaccggcaa gcgccgatcc ggcgccgttt cgcccgccga tgctggcgca cgcgctcgag
     3661 gacaccgatc ttgccgcgct cgatccggcc gagttcatgg ccgaatggaa atgggacggc
     3721 atccgcgtgc aggccgccgc ggcgcggcgc gacggcgcga tcatcgcgcg gctctattcg
     3781 cgcaccggcg aggacatctc caaaagcttc cccgacctcg tcgatgcgtt gcggcttccc
     3841 ggcgcgatcg acggcgagct cctgatcatg cgcgatagcc gcgtgcagtc gttcaacgtg
     3901 ctgcagcagc ggctcaatcg caaaaccgtc accgacaagc tcatggcgga atttcccccg
     3961 cacctgcgcg cctatgacct cttggccgac ggcgaggagg acttgcgtca gctcccgttc
     4021 gccgagcgcc ggcggcggct cgaagagttc atcacgcgcc tcggcgagcc tcgcatcgac
     4081 ctctcgcccc tcgtttcgtt cgccacgtgg gacgatctca tggccgcgcg caaagatccg
     4141 gcagcggccg gggcgggcat cgatgccgag gcggttgagg gcgtgatgct caagcggcgc
     4201 gatgcgctct acgtgcccgg ccgcccgaaa ggcccgtggt ggaaatggaa gcgcgacccc
     4261 ctcatcatcg acgccgtgct gatgtatgcc cagcgcggcc acggcaagcg ctcgtcgtac
     4321 tattccgact acacgttcgg ggtctggacg cggggcgaag acggcgacga attggtgccg
     4381 gtcggcaagg cgtatttcgg cttcaccgac gaggagctat tgcagatcga ccgctacgtc
     4441 cgccgcaaca cgacggaccg gtttggtccg gtgcgcgagg tcgtccacga gccggatcag
     4501 ggcctcgtgc ttgaagtcgc gttcgaggga ttgcagcgct cgacccggca caaatccgga
     4561 ctggcgatgc ggttcccgcg catcaaccgg ctgcgctggg acaagccgcc gggtgaagcc
     4621 gaccggctgg agctgctgga gacgctgatc gcgcgaatcg agcaggggcg gatgtcgtga
     4681 ctgcgccgtc ccctccatca tccgccgcca tcacggtccg tcgggcgcgc gccgacgacc
     4741 tcgcggcgct ggtcgcgatg gagcaggcgg cgttcaccgt cgaccatttg tcgcgaagga
     4801 gcttccgccg ctttctcgtc tcgccgagcg cgaccttcct cgtggccgag gagggcggca
     4861 agctcgcagg ctatgcgctc gtcctctacc cgctgcgctc aaagctggcg cggctttatt
     4921 ccatcgcggt cgccccccat agcggccagc ggggcgtggg gccgtttctt ctcgccgcgg
     4981 ccgaggaggc ggcgaggcgg cgccgccgcc gggcgatgcg gctcgaagtg cacgagcaca
     5041 atacgcgggc cattgcgcgc tacgagaaat cgggttaccg gctgttcggt cgacaccgcg
     5101 actactacga cgatcacggc gacgcgctgc gtttcgagaa accactcgat gcggtgccgc
     5161 cgacggccgc cgagcaggcg aagggcggct tgcaccctcg cgcgaatcga ctttgatggt
     5221 ggaaatcggc gacggcacag tcgctatccg gtctgtttcc ggctatgaga acagcgtgcc
     5281 ttattgaact cgaacgcatg atcggcccaa gtcagcagca gcgtccgcga ccaagccgca
     5341 acggcgcttt cgactggaaa gggaccagcc catgaccggc tgggtcatcc tcgtcgacca
     5401 gccccgcgat ctgccgaacg ccgagacccc gcacaaggtc atcaccacga ccgagtatct
     5461 ggcgcggccg cgcctgttcg aggtcggccg gccgaagctg gtcaatctcg ctcgttccta
     5521 cgcctaccag tcgaagggct attacgcctc gctgctcgcc gaggcgcgcg gccatcgcgt
     5581 ggtgccgacc gtcgagacca tgctcgagct gcgcgagcag aagctctacg agcatgcgct
     5641 gcccgaactc gaggacgagc tcaatcgctg cgcccggcgc gccgactttc agcccgacgc
     5701 ggaactcaag ctgctcgtct gcttcggcat tgcgcgcgac gagcgcttcg aatcgttcgg
     5761 gcggctgctg ttcgactggt tccgctgtcc ggcgctcgaa gtgatcgtcg atcccggcga
     5821 ctggctctcg atcgaccgca tccggccgcg caatatcacc cggctcgcca atggcgaggg
     5881 cgagttcttt cgcgagtcgc tgcacaatca caccaagcgc gactggcgcg atcccaaggc
     5941 gcgcaccgtc gccaagtacg acctcgccgt gctctacgat gcgaacgaga agatggcgcc
     6001 ctcctcgccg gcgtcgatca agcacttcgc gcgcatcgcc gagaagcatt ccgtcgatgt
     6061 cgagccgatc accaagcgcc agctcgccga gctcgccgaa ttcgacggct tgttcattcg
     6121 cgagaccacc tcgatcgaca accacaccta ccgctttgcc cgccgcgcct ggcaggaagg
     6181 catgccggtc atcgacgatc cgatctcgat gatccgctgc accaacaagg tgttcctgat
     6241 ggagctgctc ggccagaacc aggtgccgac gccgccgacc gtcatcattg ccgaggatac
     6301 cgatctcacc aagccgatcg acgaactcgg cctgccgctg gtggtgaaaa tccccgacgg
     6361 ctcgttctcg cgcggcgtgc acaagatcga gtcgctcact ggcttcaagc gcgtctgcga
     6421 cgagctgttc gaggagaccg atctgctgtt ggcgcaaaaa ttcctgccga cggagttcga
     6481 ctggcgcgtg ggcgtgctcg ccggcgagcc gctgttcgtc tgccagtacc ggatggcgcg
     6541 cggccattgg cagatcgtca agcaccgcgc cgacggctcc tcgcgcgaag gcggcttcaa
     6601 gaccttcgac gtcgaccagg ctccgcccgc gctcatcgac attgtggtgc gcgcggcgcg
     6661 gccgatcggc gacggcttct acggggtcga cgtgaagcag acggacaagg gcttcatcgt
     6721 catggaggtc aacgacaatc ccaacctcga acacggcatc gaggacgtcg tcggccggga
     6781 tgaaatatgg gtgcggctgc tcaaatggtt cattgagcg
//
LOCUS       DATMQB010000298         3099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_417990, whole genome shotgun sequence.
ACCESSION   DATMQB010000298 DATMQB010000000
VERSION     DATMQB010000298.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3099
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_417990"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1496)
                     /locus_tag="VNY79_08575"
     CDS             complement(<1..1496)
                     /locus_tag="VNY79_08575"
                     /inference="COORDINATES: protein motif:HMM:NF019581.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HWX72540.1"
                     /translation="MHDIVIRGGTIIDGTGRAAFSGDVAVDGGRVTAIGGKAGPARRE
                     IAADGLLATPGWVDVHTHYDGQATWDPMLAPSSWHGVTTILFGNCGVGFAPVRPYHRD
                     ALIDLMEGVEDIPGPVLAEGLKWDWESFPDFLDALERMPRTIDVAAQVPHHPLRVYVM
                     GDRAIRREPATAEDIAEMRRLTEEAVLAGAFGFTTSRTNAHKTTQGEMVPGRFAEIDE
                     LTGIGAGLGAARAGTFGMNSDFEDETAEFAWITRLAKETGRPVWFLLTDRPTDPERWR
                     RIMAGVHQARAAGASVTAQVAGRPVGVILGIATSLNPFALRERYEPFEALPLSERLCR
                     LRDPAVRRAILDDRPSPALLSRFGPLVQFAAGQWDRMYVMGDPPDYEPRAETSVAAIA
                     AREGRSPDEVAYDYLTGDAGHFLFFPVTGYARDDHEPIREMLADPGTLLGLGDGGAHV
                     AMIVDASAPTYMLTHWGRDRKRGPGLPLEYMVKRQTSETADFFGFHDRG"
     gene            1744..2403
                     /locus_tag="VNY79_08580"
     CDS             1744..2403
                     /locus_tag="VNY79_08580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX72541.1"
                     /translation="MGDVWAALETAEFAHIVGLSLAVSLSATAFAAVVGLPCGAALAI
                     CRFPGRRLLILLANAFLGLPPVVVGLALYLLLSRSGPLGVLALLFTPGAMVIAQALLA
                     TPIITALTHRAIEEPWQEYGGALRVDGATRLRSIRMLLAIARRSAVTAVLAGFGRTIS
                     EVGAVLIVGGNIAGYTRIMTTAIVLKTSEGDLGLALGFGLVLIGTSVAVSASVFALWE
                     R"
     gene            2403..>3099
                     /locus_tag="VNY79_08585"
     CDS             2403..>3099
                     /locus_tag="VNY79_08585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HWX72542.1"
                     /translation="MKLRQLFLLLFVVLLGRVTIAAEQPASQSIILASTTSVENSGLL
                     AHILPAFTKETGITVHVLAQGTGQALQTAARDDADLVLVHDPEAEQKFIAAGDGIDRR
                     QIAWNDFIVVGPRSDPAHIGGTHDAVAALKAIAGAQAPFVSRGDKSGTDALEHRLWRV
                     AEIDPAKAGGGSWYRDIGGGMGAALNTAQAMRAYTISDRGTWLSFGNKGDLTVLVEGD
                     PRLLNRYDVILLNP"
BASE COUNT          496 a         1010 c         1025 g          568 t
ORIGIN      
        1 ccgcggtcgt ggaagccgaa gaaatcggcg gtctcgctcg tctggcgctt caccatgtat
       61 tcgagcggca gacccggccc acgcttccgg tctcggcccc aatgggtcag catgtaggtc
      121 ggcgcgctcg cgtcgacgat catcgcgaca tgcgcgccgc cgtcgccgag cccgagcaat
      181 gtgcctgggt cggccagcat ctcgcggatt ggctcgtggt cgtcccgagc gtagccggtc
      241 accgggaaga ataggaaatg gccggcgtct ccggtcaggt agtcataggc aacctcgtcc
      301 ggcgagcggc cttcacgcgc cgcgattgcg gcaacgctgg tctcggcccg cggctcgtaa
      361 tcgggcggat cgcccatcac gtacatgcgg tcccattgcc cggcggcgaa ctgcacgagc
      421 ggcccgaagc ggctcagcag agccggtgac ggccggtcgt ctaggatcgc ccggcgtacc
      481 gccggatcgc ggaggcggca aaggcgctcc gacaacggca aggcctcgaa tggttcgtag
      541 cgttcgcgga gggcgaacgg attgagcgag gtcgcgatcc cgagaattac gcccaccggg
      601 cggccggcga cctgcgccgt caccgaagcg cccgcggcac gcgcctggtg cacgccggcc
      661 atgatgcgcc gccagcgctc agggtcggtc ggccggtcgg tgagcagaaa ccacaccggc
      721 cgaccagtct ccttcgcgag ccgcgtaatc caggcgaact cagctgtctc atcctcgaaa
      781 tcgctgttca tcccgaaggt gccggcacgc gcagcaccca gacccgcgcc gatgccggtc
      841 agctcgtcga tttcggcgaa gcggcccggc accatctcgc cctgcgtcgt tttgtgtgcg
      901 ttggtgcgtg aggtcgtgaa accaaaagcg ccggcgagca ccgcttcctc ggtcagccgg
      961 cgcatttcgg cgatgtcctc ggccgtggcc ggctcgcgcc ggatcgcgcg gtcgcccatc
     1021 acgtagacgc gcagcgggtg atgcggaacc tgggcggcga catcgatcgt ccgcggcatc
     1081 cgctcgagcg catcgagaaa gtcgggaaag ctctcccaat cccatttcaa cccttcggcg
     1141 agcaccgggc cggggatatc ttcgacaccc tccatcagat cgatgagggc gtcgcgatga
     1201 tagggccgga caggcgcgaa gccgacgccg caattgccga acagaatggt cgtgacgcca
     1261 tgccaggagg agggcgcgag catcgggtcc caggtcgcct gcccgtcata atgggtgtgg
     1321 acatcgaccc agccgggtgt ggccaacagt ccgtcggccg cgatctcgcg ccgcgccggc
     1381 cccgccttgc cgccgatcgc ggtaacgcgc ccgccatcga ctgcaacgtc gccgctaaag
     1441 gccgcccggc cggtcccgtc gatgatcgtg ccgccccgaa tgacgatgtc gtgcatggat
     1501 ccgccctcga ctacccgtag caaggaagca cctttacaat gcgccaggtc ggcggtttcg
     1561 ccgatatgcc gagcgagcag agctgatttg cgccttcagg ccgatgatgt cctcgaggag
     1621 ccacgcgcca atacccttgc cgaggcgcga ggcgtcgacc ggagcgatct gcgtggcggg
     1681 tcggccgcgg tcgcgaacat gcccggcgga taagggtctt ggactgtcga gatattcgtt
     1741 ttggtgggtg atgtctgggc cgcgctcgag acggctgaat tcgcgcacat cgtcggcctt
     1801 tccttagcag tcagcttatc cgccacggcc tttgccgccg ttgtaggact gccatgcgga
     1861 gctgcattgg caatctgccg gtttcccggc cgccgattgc tgatcctgct tgcgaatgcg
     1921 ttcctcggtt tgcccccggt tgtcgtcggc ctcgcgcttt acctgttgtt gtctcgctcg
     1981 gggcctttgg gcgtgcttgc tctcctcttt acacccggcg ctatggtgat cgcgcaggcg
     2041 cttctcgcga cgccgattat caccgccttg acgcatcgtg cgatcgagga gccttggcag
     2101 gaatacggcg gcgcgttgcg cgtcgacggc gcaacccggt tacggtcgat ccggatgctt
     2161 ctggcgatcg cacgtcgctc cgccgtgacc gctgtgttgg ctggcttcgg ccgcacgatc
     2221 tccgaagtcg gtgcggtctt gatcgtcggt ggcaacatcg cgggctacac gcgaatcatg
     2281 acgacagcga tcgttctgaa gacgagtgag ggcgatttgg ggctggcgct cgggtttggc
     2341 ctcgtgctga tcgggactag cgtcgccgtc agcgccagcg tttttgctct ttgggagagg
     2401 tgatgaaact ccggcaactt ttcctgctgt tgttcgtcgt gttgctaggc cgcgtgacca
     2461 tcgcggccga gcagccggct tctcaatcaa tcattctcgc gtccaccacc tcagtcgaaa
     2521 attcgggctt gctcgcgcac atcctgccgg ccttcaccaa ggagaccggc ataaccgtgc
     2581 atgtcctggc tcagggtacg ggccaggcgc ttcagacggc ggcgcgcgac gacgccgatc
     2641 tggttctggt tcatgacccg gaggctgagc agaaattcat cgcggccggc gacggcatcg
     2701 accgcaggca gatcgcgtgg aatgatttta tcgtggtcgg gccgcgctcc gatccggcgc
     2761 atatcggcgg cacccacgat gcggtcgcgg cgttgaaggc gattgctggc gcacaagcgc
     2821 cgtttgtctc gcgcggtgac aagagcggca ccgacgcgct cgaacaccgc ctgtggcgtg
     2881 tggcggagat cgatcccgcc aaagctggcg gcggatcatg gtaccgcgat atcggcggcg
     2941 gcatgggggc ggcgctcaac accgcacaag cgatgcgcgc ctatacgatc agcgatcgcg
     3001 gtacttggtt gagcttcggc aacaagggcg atctcaccgt gctggtcgaa ggcgacccgc
     3061 gtctactgaa ccgctacgac gtgatcctgc ttaacccgg
//
LOCUS       DATMQB010000299         2194 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1661233, whole genome shotgun sequence.
ACCESSION   DATMQB010000299 DATMQB010000000
VERSION     DATMQB010000299.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2194)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2194)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2194
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1661233"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..565
                     /gene="hisH"
                     /locus_tag="VNY79_08590"
     CDS             <1..565
                     /gene="hisH"
                     /locus_tag="VNY79_08590"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HWX72543.1"
                     /translation="DQPIVVTRDPDAVASADRVVLPGVGAFADCRRGLDAVDGMVAAL
                     EEAVLEKGRPFFGICVGMQLLAERGREYEVTEGLGWIAGEVNRIKPNDAGLKIPHMGW
                     NTLNISREHKLLDGLPLGPQGLHAYFVHSFQLKPSRPADLVAEADYGGAVTAFVARDN
                     IVGTQFHPEKSQKLGLALIANFLKWKP"
     gene            562..1299
                     /gene="hisA"
                     /locus_tag="VNY79_08595"
     CDS             562..1299
                     /gene="hisA"
                     /locus_tag="VNY79_08595"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003949 -
                     1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HWX72544.1"
                     /translation="MILFPAIDLKNGLAVRLEQGDMARATVFNRDPAEQARIFAAQGF
                     QYLHLVDLDGAFAGRPMNAAAVERILAAVQIPVQLGGGIRDRATIEAWLGKGVTRVII
                     GTAAVRDPALVKEAAGAFPGRIVVGLDARDGKVAVDGWAATSELSAFELARRFEDAGV
                     AAIVYTDVARDGMLKGLNLDATIALADAVSIPVIASGGFASIDDVRALLAARAQKLAG
                     AIVGRALYDGRLDAAEALNLIRTARAA"
     gene            1301..2077
                     /gene="hisF"
                     /locus_tag="VNY79_08600"
     CDS             1301..2077
                     /gene="hisF"
                     /locus_tag="VNY79_08600"
                     /EC_number="4.3.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000107 - imidazoleglycerol-phosphate
                     synthase activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HWX72545.1"
                     /translation="MFKVRVIPCLDVKDGRVVKGVNFVNLRDAGDPVAAAIAYDEAGA
                     DELTFLDITASHEDRAIMLDVVRRTAEACFMPLTVGGGVRTIEDIRTLLASGADKVSI
                     NTAAVARRAFVQEAAEKFGDQCIVVAIDAKKVSKAGEADRWQIFTHGGRKPTGIDALA
                     YASDVVALGAGEILLTSMDRDGTRQGFDLGLTRAIADSVPVPVVASGGVGTLDHLIEG
                     VRDGHASAVLAASIFHFGEHSVREAKQYMARAGLPMRLDP"
     gene            complement(2074..>2194)
                     /locus_tag="VNY79_08605"
     CDS             complement(2074..>2194)
                     /locus_tag="VNY79_08605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-hydroxychromene-2-carboxylate isomerase"
                     /protein_id="HWX72546.1"
                     /translation="EEAQRLGLFGAPSFSTADGELFWGNDRLEHALAWAKQHG"
BASE COUNT          339 a          748 c          740 g          367 t
ORIGIN      
        1 cgaccagccg atcgtcgtga cccgcgatcc ggatgcggtt gcctccgccg accgcgtcgt
       61 gcttccgggc gtcggtgcct ttgccgattg ccgccgcggt ctcgatgcgg tcgacggcat
      121 ggtcgccgcg ctcgaggagg ccgtgctcga aaagggccgg ccgttcttcg gcatctgcgt
      181 cggcatgcag ttgctggccg agcgcgggcg cgaatacgag gtaacggagg gcctcggctg
      241 gatcgccggc gaggtcaatc gcatcaagcc gaacgatgcg ggtctgaaaa ttccgcatat
      301 gggctggaat acgctcaaca tttcgcgcga gcacaagctg ctcgacggcc tgccgctcgg
      361 cccgcaaggg ctgcacgcct atttcgtgca ctcgtttcag ctcaagccgt cgcggccggc
      421 cgatctggtg gcggaagccg actatggcgg cgccgtcacc gcatttgtcg cgcgcgacaa
      481 catcgtcggc acccaattcc atccggagaa gagccagaag ctcggcctcg cgctgatcgc
      541 gaacttcctg aaatggaagc cgtgatcctc tttcccgcga tcgacctaaa aaacgggctc
      601 gccgttcgcc tggaacaggg cgacatggcg cgggcgacgg tgttcaatcg cgacccggcc
      661 gagcaggcgc gcatttttgc ggcgcagggc tttcaatatc tccatctggt cgatctcgat
      721 ggcgcctttg ccggacggcc gatgaacgcc gcggcggtcg agcgcatcct cgccgcggtg
      781 cagataccgg tgcagctcgg cggcggcatc cgcgaccgcg ccaccatcga ggcatggctc
      841 ggcaagggcg tgacgcgcgt catcatcggc accgccgccg tgcgcgatcc ggcgctggtg
      901 aaggaggccg ccggcgcgtt tcccggccgc atcgtcgtcg ggctcgatgc gcgcgacggc
      961 aaggtcgcgg tcgacggctg ggcggcgacg tcggagcttt ccgcgttcga gcttgcgcgc
     1021 cgcttcgagg acgccggcgt cgccgccatc gtctacaccg acgtggcacg cgacgggatg
     1081 ctcaaggggc tcaacctcga tgccaccatc gcgctcgccg acgccgtttc gattccagtc
     1141 atcgcctcgg gcgggttcgc ctccatcgac gatgtccgcg cattgttagc ggcgcgtgca
     1201 caaaaacttg ccggcgcgat cgtcggccgc gcgctctatg acggcaggct cgacgcggcg
     1261 gaagcgttaa atttgatccg cacggcgcgg gcggcgtgac atgttcaagg tccgcgtcat
     1321 tccctgcctc gacgtgaagg acggccgggt cgtcaagggc gtcaatttcg tcaacctgcg
     1381 cgatgccggc gacccggtcg cggcggcgat cgcctatgac gaggcggggg cggacgagct
     1441 caccttcctc gacatcaccg cgagccacga agatcgcgcc atcatgctcg acgtggtacg
     1501 gcgcaccgcc gaggcctgct tcatgccgct cacggtcggc ggcggcgtgc gcacgatcga
     1561 ggacatccgc acgctgctcg cctcgggcgc cgacaaggtg tcgatcaata ccgcggcggt
     1621 cgcgcgccgc gccttcgtcc aggaggcggc ggaaaaattc ggcgatcagt gcatcgtggt
     1681 cgccatcgac gctaagaagg tgtcgaaagc gggcgaggcg gaccgctggc aaatcttcac
     1741 ccatggcgga cgtaagccga ccgggatcga cgccctcgct tatgccagcg acgtggttgc
     1801 gctcggcgcc ggcgagatcc tcctcacctc catggaccgc gacggcacgc ggcagggttt
     1861 tgacctcggg ctcacgcgcg ccatcgccga cagcgtgccg gtgccggtcg tcgcctcggg
     1921 cggcgtcggc acgctcgatc atctgatcga gggcgtccgc gacggccacg cgagcgccgt
     1981 gctcgccgcc tcgatctttc atttcggcga acactcggtg cgcgaagcga agcagtacat
     2041 ggcgcgcgcc ggcctgccga tgcggctcga tccttaaccg tgctgcttcg cccaggcgag
     2101 cgcgtgttcc agccggtcgt tcccccagaa cagctcgccg tcggccgtcg agaagcttgg
     2161 cgcgccgaac aggccaagcc gttgcgcctc ttcg
//
LOCUS       DATMQB010000300        17231 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2282769, whole genome shotgun sequence.
ACCESSION   DATMQB010000300 DATMQB010000000
VERSION     DATMQB010000300.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 17231)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17231)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17231
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2282769"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            65..397
                     /locus_tag="VNY79_08610"
     CDS             65..397
                     /locus_tag="VNY79_08610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72547.1"
                     /translation="MMNVQTAYTQDFFGEIVVTNPNANENMTVHFKVKDYNAWRTSYN
                     GHEKERATAGITNGRVFRSADDPNDVLILQDVADASKARTWLGSNEMKTVMEKSGVVG
                     APSIRFAA"
     gene            complement(1066..1611)
                     /locus_tag="VNY79_08615"
     CDS             complement(1066..1611)
                     /locus_tag="VNY79_08615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0016780 - phosphotransferase activity, for
                     other substituted phosphate groups [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-alcohol phosphatidyltransferase family
                     protein"
                     /protein_id="HWX72548.1"
                     /translation="MSIPNLITLGRIILVPAVVWAIISGEMLVAFALFLVAGISDAVD
                     GFLAKRFHMASELGAYLDPLADKALIVSIYVALGIAGALPISLVILVVSRDIMIISGF
                     MLSWLIGKPMPVRPLAISKVNTVAQIFLATFVLAEQGFHFNAALLSTIVVLLVAVLTV
                     LSIAFYLAEWVRHMNSFGAAH"
     gene            1763..2833
                     /gene="purM"
                     /locus_tag="VNY79_08620"
     CDS             1763..2833
                     /gene="purM"
                     /locus_tag="VNY79_08620"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004641 -
                     phosphoribosylformylglycinamidine cyclo-ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HWX72549.1"
                     /translation="MAFVDEARYAAAGVDIDAGNRMVELIRPLVRRTARPGADAEIGG
                     FGGLFDLKAAGFSDAILVAATDGVGTKVKIAVATQRHDTIGIDLVAMSVNDLVVQGAE
                     PLFFLDYFACGKLDPEVGAAVVTGVAAACKEARCALIGGETAEMPGIYQAGDYDLAGF
                     AVGAVARDKLLPRKDIAPGDSVIGLASSGVHANGFSLVRRIVAAAGLPWDAPAPFEPS
                     RQLGEALLMPTRLYVQSCLAAIRATGAVKALAHITGGGFVDNIPRVLPQGLAVALDLD
                     RVPVHPVFKWLAAAGGVSEREMLRTFNCGIGMIAVLDAEAAEQACEAFAANGETVVRL
                     GEVIAAAGEPTAAFRGRLDLSW"
     gene            2839..3468
                     /gene="purN"
                     /locus_tag="VNY79_08625"
     CDS             2839..3468
                     /gene="purN"
                     /locus_tag="VNY79_08625"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006934868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004644 - phosphoribosylglycinamide
                     formyltransferase activity [Evidence IEA];
                     GO_process: GO:0009152 - purine ribonucleotide
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HWX72550.1"
                     /translation="MDKKRVAVLISGRGSNMMALIEAAKARDYPAEIALVASNRPDAQ
                     GLARAHEQGVVTAIVDHTAFGDDRESFERALDGELQAHRIDLVCLAGFMRLLTPWLVA
                     RWSGRMLNIHPALLPQLKGLHTHRRALAAGLRQHGATVHFVVPAMDSGPIVAQERVPV
                     CEGDTEETLAERVLAVEHRIYPQALRAVAEGRLRLAPSDIEQGAEKRGA"
     gene            complement(3579..3782)
                     /locus_tag="VNY79_08630"
     CDS             complement(3579..3782)
                     /locus_tag="VNY79_08630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HWX72551.1"
                     /translation="MQKGTVKWFNPTKGYGFIKPSSGDKDVFVHISAVERAGLRTLNE
                     GQEVEYELVTNRGRTSAENLKVA"
     gene            complement(4223..4804)
                     /locus_tag="VNY79_08635"
     CDS             complement(4223..4804)
                     /locus_tag="VNY79_08635"
                     /inference="COORDINATES: protein motif:HMM:TIGR03717.1"
                     /note="Members of this highly hydrophobic protein
                     family,regularly are found preceded by the yybP-ykoY
                     manganese riboswitch (see RF00080). A metal cation
                     transport function is proposed; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YjbE family putative metal transport protein"
                     /protein_id="HWX72552.1"
                     /translation="MFSSFGGAGFWIGVPQIALVNVVLSGDTAVVTALACRGLPPARR
                     PWGIAVGAGTAALLLLTFAVIVAPLLAYPCVKLIGGLVLIYVASKLLVQRGACEEAVA
                     AATNLPAVVRIVLTADIILGLDNVIALAGIARGNFALLVVGLAISLPIILAGAAFFMK
                     LLDRFPFLVWAGATLLGWVGGDILRMIPPSRGL"
     gene            complement(4976..5398)
                     /gene="ndk"
                     /locus_tag="VNY79_08640"
     CDS             complement(4976..5398)
                     /gene="ndk"
                     /locus_tag="VNY79_08640"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004550 - nucleoside diphosphate kinase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HWX72553.1"
                     /translation="MALERTFSIIKPDATARNLTGAINAMIEEAGLRIVAQKRVLITR
                     AQAETFYAVHRQRPFFRELVEFMISGPVVVQVLEGENAIAAYRDLMGATDPAKAAPGT
                     IRKAFAKSIGENSVHGSDAAATAGMEIAQFFAGNEIVG"
     gene            complement(5514..6518)
                     /locus_tag="VNY79_08645"
     CDS             complement(5514..6518)
                     /locus_tag="VNY79_08645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HWX72554.1"
                     /translation="MATDVTHRTVEANGIRLHLAEQGEGPLVILCHGFPESWYSWRHQ
                     LAALSAAGFHVVAPDMRGYGRSDRPQAIEQYTLLHLVGDMVGLLDALGAEQAVIAGHD
                     WGAPVAWHAALLRPDRFRGVIGLSVPYRPRTSVVPTSVMPQRDDALFYQLYFQKPGVA
                     EAELERDPRETILKLLFSGSGDVPRRSAGSADASNQTPAQGDVGMVPRDGGFLSRMVK
                     PAVMPPWLGEADIDFYAGEFARTGFGGGLNWYRNIDRNWELLAPFAKAKVTVPALYVA
                     GDRDLVVAFRGMDKMIANLTDYVPHLRAKIMLPGCGHWTQQERAAEVNAAMIDFLRQL
                     "
     gene            complement(6544..7143)
                     /locus_tag="VNY79_08650"
     CDS             complement(6544..7143)
                     /locus_tag="VNY79_08650"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72555.1"
                     /translation="MDLRSIHSAALAAMATALFLGGCSADDASGWFSKPVDLFGRRGG
                     YNFSQLGGAKQERPVTANDLVDASGACATAPAPEAQAAAANPGQSAPGAPDEAAQLRG
                     GVAVGMSECDVIARVGRPAAVNIGNNQNGERTAAITFTSGPRPGVYRFVGGRLAEMDR
                     VAEPAPGPEQKKLAGSKKPAKTKKPKGDDASKPKGDDAS"
     gene            7440..8177
                     /locus_tag="VNY79_08655"
     CDS             7440..8177
                     /locus_tag="VNY79_08655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HWX72556.1"
                     /translation="MHLQFVGCGDAFGSGGRFNTCFHLVGRDINALIDCGATSLVSMN
                     RLAIKRNEVDFIFLSHFHGDHVGGVPFFVLEANYIVKRDRPLTIVGPPSLKSRYPQIM
                     DTGFPGAKAMELRFPLMLREVEIGRRTEFGPLRLTAYHVVHDDRAGPCLGLRFEAEGK
                     VIAFSGDTEWTDALVDVARDADLFICEAYTRDKPAPTHMALSLLEPHLVRIRPKRLIL
                     THMSNDMLARRAELPYETAEDGMIVEL"
     gene            complement(8227..10875)
                     /gene="alaS"
                     /locus_tag="VNY79_08660"
     CDS             complement(8227..10875)
                     /gene="alaS"
                     /locus_tag="VNY79_08660"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041357852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004813 - alanine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006419 - alanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HWX72557.1"
                     /translation="MSGVNEIRANFLAYFAREGHEVVPSSPLVPRNDPTLMFTNAGMV
                     QFKNLFTGLEKRPYTRAVTAQKCVRAGGKHNDLDNVGYTARHHTFFEMLGNFSFGDYF
                     KERAIELAWRLVTKEFGVPADRLMVTVYIDDDEAFNLWKKIGGLPESRIGRIAGSDNF
                     WAMGDTGPCGPCSEIFYDHGAHIPGGPPGSPDADGDRFVEIWNLVFMQYEQLAGGERV
                     GLPRPSIDTGMGLERIAAVLQGTHDNYKIDLFGALIEAVADATGVDPEGAHQASHRVI
                     ADHLRASSFLIADGVLPSNEGRGYVLRRIMRRAMRHAELLGEKEPLMWRLVPVLVREM
                     GLAYPELLRAEPLITETLKFEETRFRRTLERGLAILDEESKELKRGAMFDGVTAFTLY
                     DTYGFPLDLTQDALKPRGIGVDLAAFTDAMERQREKARASWTGSGEAADEAVWFTLRE
                     HVGGTDFLGYETESAAGAVAALVRDGKAVTTLKQGESGAVILNQTPFYAESGGQVGDT
                     GAMTGEGVRFAVTDTQRRAGDLYVHLGKVEQGTLKVGTPLSLEVDHERRGAIRKNHSA
                     THLLHEALRQVLGDHVAQKGSLVAPDRLRFDFSHPKPMTAGEIERIEDIANDVVLQNA
                     PVITRLMGRDDAVASGARALFGEKYGDEVRVVAMGKGGNALGWSVELCGGTHVRRTGD
                     IGVVSVIAEGAVASGVRRIEALTGTAARKELNRHRNDIRLLAAEMNAPLAEVTARAAA
                     LVAERKRLERELSEAKKKLAMGGGGSDSAGGVRTVGDIRLMARSVAGIELKELRGLAD
                     EGKKKVGSGVVAIVGVTGEGKAGLVVGVTPDLTGRFNAVDLARKGAEALGGKGGGGRP
                     DLAQAGGPDGSKADAALAAIEAALGG"
     gene            10992..11927
                     /locus_tag="VNY79_08665"
     CDS             10992..11927
                     /locus_tag="VNY79_08665"
                     /EC_number="1.5.1.20"
                     /inference="COORDINATES: protein motif:HMM:NF014296.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004489 - methylenetetrahydrofolate
                     reductase (NAD(P)H) activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0006555 - methionine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylenetetrahydrofolate reductase"
                     /protein_id="HWX72558.1"
                     /translation="MNEQNTPQPRTFEERLQARRFVMTAEVTPPLSFDPEDLLRKAAP
                     LRGLADAVNVTDGAGARAHMGALAAAAILDRAGIEPILQIACRDKNRIALQSELMGAA
                     ALGIRNLMLLGGDDPKAGDQPETKAVFDIDSKTLIETARRLRDDGTLPTGRKVAGRAA
                     FLIGAADVPLDPPAGWQPAALHAKVSAGAQFVQTQFCMDAAIVRRYVAALESAGLTRQ
                     LALLVGVTPLRSAKSARWMKDRLFGTIIPDALIARMDEAADPSHEGVHICVELIEELS
                     TIPGVAGVHIMAPGNDAAIPETIEAARAKVKSATR"
     gene            complement(12251..13426)
                     /locus_tag="VNY79_08670"
     CDS             complement(12251..13426)
                     /locus_tag="VNY79_08670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HWX72559.1"
                     /translation="MFATFFHELKQAGLPVTLREYLTLMEAMEKDLAGRRVEDFYYLS
                     RSALVKDERNLDKFDRVFGHVFKGLDFITEALTAEIPLEWLKKLTEKHLTEEEKRQIE
                     AMGGLEKLLETLRQRLAEQKGRHQGGKKWIGTAGTSPFGAYGYNPEGVRIGQDGNRSF
                     RAVKVWDRRDFKDLAGDVELGTRNIKLALRRLRKFARTGAPEELDLDGTIKGTAQKGY
                     LDILMRPERHNTIKVLLFFDIGGSMDWHIKVTEELFSAAKTEFKHMVHLYFHNCLYEK
                     VWKENARRWTESTPTWDVLHTYPHDYKVIFVGDASMSPYEIAAPGGSVEHFNEEAGQV
                     WMERLTSTYPSCVWLNPVPEREWELTASIKMMRQLIGGRMYPLTLEGLDQAMRELGR"
     gene            complement(13534..14883)
                     /locus_tag="VNY79_08675"
     CDS             complement(13534..14883)
                     /locus_tag="VNY79_08675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HWX72560.1"
                     /translation="MTGAVGRFWDRVTRWIKSVMPKGLYARSLLIIIVPMVVLQSVVA
                     FMFMDRQWSLVTRYLSSAVTQEIATLIDVYNSYPQGADRAQLRRIAQDRLGLAVDFLP
                     ETQLPPPGPKPFFSQLDQALSEEIRKEIKLPFWIDTVGRSSIVEIRIQLADTVMRVFA
                     RRTDVYDANSWMFLIWMVATSLVLLAVAILFLRNQIRPIVRLADAADAFGKGREAPNF
                     RPRGATEVRRAAAAFLEMKSRIERSIEQRTTMLAGVSHDLRTVLTRFKLELALFGDTA
                     ETEAIKKDVDEMAAMLEAYLAFARGDTGEQSAPTDIALLLDELKLDSERHGHRASVAF
                     HGQPIVTVRPAAFKRCLANLVSNAARFASAVAITGHRDHRWLTVSVDDDGPGIPLQMR
                     EEVFKPFLRIDDARNQDEGGTGLGLAIARDIARSHGGDITLSDSPLGGLRATVKVPV"
     gene            complement(14985..15698)
                     /locus_tag="VNY79_08680"
     CDS             complement(14985..15698)
                     /locus_tag="VNY79_08680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HWX72561.1"
                     /translation="MTATHAANPADDAPHLLVVDDDRRIRALLLRFLLGEGYRVTTAE
                     TAREARAKLEGLKFDLLILDVMMPGENGFDLARAIRTGSTVPILMLTARDEKENRIKG
                     LEIGADDYLAKPFEPRELSLRVANILKRVRPPSAPPAESVRFGPFIFHLGRGELRRGE
                     EVIRLTDREREMLRVLAASVGETIPRQALAGTNGDSVGERTVDVQVNRLRRKIENDPA
                     NPLIVQTVRGVGYRLVATP"
     gene            complement(15695..16249)
                     /locus_tag="VNY79_08685"
     CDS             complement(15695..16249)
                     /locus_tag="VNY79_08685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HWX72562.1"
                     /translation="MADFSITTASKLRPVAAPKPAPAPGQPCWDLIELFFFAYRDFVG
                     DPDEVLVTLGFGRAHHRVLHFVTRNPGMKVAELLDVLKITKQSLGRVLKQLIDEGHIV
                     QKEGANDRRQRLLYVSDAGEALAMRLAGMQTERIGRVLAELGPGARDQVQRFLAGMID
                     AEDRDQVLRLIARADGAQRRDGAS"
     gene            16483..>17231
                     /locus_tag="VNY79_08690"
     CDS             16483..>17231
                     /locus_tag="VNY79_08690"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004084 - branched-chain-amino-acid
                     transaminase activity [Evidence IEA];
                     GO_process: GO:0009081 - branched-chain amino acid
                     metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HWX72563.1"
                     /translation="MAVPFDQRSDLIWFDGKLVPTADCKISVLTHGLHYASCVFEGER
                     AYGGEVFRGTEHSERLKRSAQLMDFEIPYSVAEIDAAKRLVLEKNNQKDAYVRPLAWR
                     GSEQLGVSAQNNKIHLAVATWEWPSYFDPAQRLKGIRLDLAEYRRPDPKTIPALAKAA
                     GLYMICTISKHRAERRGYADAMMLDWQGRVAECTGANIFFIKDGKIHTPIADCFLAGI
                     TRATAMSIARRHNIEVVERRIVPEELAGFSE"
BASE COUNT         3018 a         5666 c         5602 g         2945 t
ORIGIN      
        1 gtaatatagt ttttgattac cttgttttgt cagggttgag cgttatctga gttgagcagt
       61 ctgaatgatg aacgttcaga ccgcgtatac tcaagatttt tttggagaaa tcgttgtgac
      121 aaatcccaat gcgaacgaaa acatgactgt ccacttcaag gtcaaggact acaacgcttg
      181 gcgcacgagc tacaatgggc atgagaagga acgcgcgact gccggcatca ccaacggtcg
      241 ggtgtttcgg agcgccgatg acccgaatga cgtgctgatc ctccaggacg tcgctgacgc
      301 atcgaaggcc cgcacgtggt tgggttcaaa tgaaatgaag acggtaatgg agaagagcgg
      361 cgtagttggc gcgcccagca tccgcttcgc ggcgtaagcc ggcgccaaaa caaagtacgc
      421 ctcgtgcggc ttgaccggac gaggcggttt gcgtggcttc ggattgaggc aaaccggaat
      481 gcctcgatcg cgaaaccatt ccggcgccgc catagagggc atgcgttggc ccaggagtat
      541 gacgcttgga tacgatgctt ttagagcctg atggccgcgg gtcgttcaca ttcacattct
      601 cgtctgcgcg cggagaaatg tccggccgcg tcaacgtggg aaccgaaggt cctccggatc
      661 gacggtcaat ggccgacaag gagcaagcgg ccaggaacca aattctggct ctggccagag
      721 aactcgctca agtctgcgga tgacgatcgc tgaagatcgg tcgctcgagc gatcgaatcg
      781 cttttgtgcg gttgcagcgg tcggttagct aatttttggg gtgcccggtg ctcgagcagg
      841 cggctgacgc tgcgggggcg attggcctct ggccgccggc aggcgcatcc caaaagttgg
      901 agcggttcag ctgagaatct cctgccttgt gggcctgaag cagtggcgcc cggtcaccct
      961 gtgcgcctcg acgacatagg gaagctcgac gccagtcttg cggcagttgc tcggctccga
     1021 attgcggaca cctccagcga aatccggctt cgcagcaggg gacgctcaat gcgccgcccc
     1081 gaacgagttc atatgccgga cccattcggc gagatagaag gcgatcgaaa gcacggtcaa
     1141 gacggcgacc agcagcacca cgatcgtcga cagcaacgcc gcattgaagt ggaaaccctg
     1201 ctcggccagg acgaacgtgg cgaggaagat ctgtgccacg gtgttgacct tcgagatcgc
     1261 cagcggccgc accggcatcg gcttgccgat cagccacgac agcatgaagc cgctgatgat
     1321 catgatgtcg cgcgaaacga cgaggatgac cagcgagatc ggcagtgcgc cggcgatccc
     1381 cagcgcaaca tagatcgaca cgatcagcgc tttgtcggcg agcgggtcga gataggcgcc
     1441 gagctcgctc gccatgtgga agcgcttggc aagaaaccca tcgaccgcat cgctgatccc
     1501 ggccaccagg aacagcgcaa acgcgacgag catctctccc gatatgatcg cccagaccac
     1561 ggcgggcacc aggatgatgc gccccaaggt tatgaggttg ggaatgctca aactctgccc
     1621 cggctcccag cgccgacctc ccgcgcgccg tccttttgtc ccctatatag cggcgcccgc
     1681 gcgcttgcgc atcgggcgat tccgacgtag gaggcgccga gcagtcccgc cccgacgggg
     1741 accgggaaaa tctgcccaat tggtggcttt cgtggacgag gcacgctacg cggccgccgg
     1801 tgtcgacatc gatgccggca accgcatggt ggagttgatc aggccgctgg tgcgcaggac
     1861 cgcccgcccc ggcgccgacg ccgagatcgg cggtttcggc gggctattcg atctcaaagc
     1921 tgccggcttc tccgacgcga tccttgtcgc tgcgaccgac ggcgtcggca ccaaggtcaa
     1981 gatcgcggtc gcgacgcagc gccacgacac gatcggcatc gatctcgtcg ccatgtcggt
     2041 caacgatctc gtcgtgcagg gcgccgaacc gctgttcttc ctcgactatt ttgcctgcgg
     2101 caagctcgac cccgaggtcg gcgcggctgt ggtcaccggc gtcgcggcag cgtgcaagga
     2161 ggcgcgttgc gcgctgatcg gcggcgagac ggcagagatg cccggcatct accaggccgg
     2221 cgattatgac cttgccggct tcgcggtcgg cgccgtggcg cgtgacaagc tgctgccgcg
     2281 aaaggacatc gcaccgggcg actccgtgat cgggcttgct tcgtccggcg tgcacgcgaa
     2341 cggcttttct ttggtccgcc gcatcgtcgc cgctgccggc ctcccttggg atgccccggc
     2401 gccgttcgag ccgtcgcgac agctcggcga agcgctgctc atgccgacgc ggctttacgt
     2461 gcaatcgtgt ctcgctgcga tccgcgcgac gggagcggtc aaggcgctcg cccacatcac
     2521 cggcggcggg tttgtcgaca acattccgcg cgtgctccca cagggcctgg cggtcgcatt
     2581 ggatctagac cgcgtgcccg tccatccggt gttcaaatgg ctcgccgccg ccggcggggt
     2641 cagcgagcgg gagatgctgc gcaccttcaa ctgcggcatc ggcatgatcg cggtgctcga
     2701 tgcggaagca gccgagcaag cgtgcgaggc gttcgccgcg aatggcgaga ccgtcgttcg
     2761 gcttggcgag gtgatcgccg ccgccggcga accgaccgcc gcgtttcgcg ggcgcctcga
     2821 cctctcgtgg tgaggcgcat ggacaagaag cgcgtcgccg tccttatttc cggccgcggc
     2881 tcgaacatga tggcgctgat cgaagcagcg aaagcgcggg actatccagc cgaaatcgcg
     2941 ctcgtcgcgt cgaaccgccc cgacgcacaa ggcctcgccc gcgcgcacga gcaaggcgtc
     3001 gtgaccgcaa tcgttgatca caccgccttc ggcgacgacc gcgagtcttt cgaacgcgcg
     3061 cttgacggcg aactccaggc gcaccggatc gatcttgtgt gcctcgccgg cttcatgcgg
     3121 ctgttgacgc catggttggt cgcgcgttgg agcggccgca tgctcaacat ccatccggcg
     3181 ttgctgccgc agctcaaggg acttcacacc caccgccgcg cgctagcggc cggcctgcgc
     3241 cagcacggcg ccaccgtgca ttttgtcgtg ccggcgatgg attcggggcc gatcgtggcg
     3301 caggagcggg tgccggtgtg cgaaggtgat acggaagaaa cactggccga gcgggtgctc
     3361 gcggtcgagc accggatcta tccgcaggcg ctgcgcgccg tggccgaggg ccgcctgcgc
     3421 ctcgcacctt ccgacatcga gcaaggcgcg gagaagcgcg gagcgtgatt ttttgactgc
     3481 ccttcgggct tgcgtcgcaa caaatcagcg tcaaagaaaa agcccccggg ttttttgacc
     3541 cgagggctat acgaaccggc gcttccgccg ggcaactctt acgcgacctt gagattctcc
     3601 gcggatgtcc tgccgcgatt agttacaagc tcgtactcga cttcttggcc ctcattgagc
     3661 gtccgcaagc cggcgcgctc gacggctgaa atgtgaacga acacatcctt gtcgccactc
     3721 gatggcttta tgaacccgta gcccttggtt ggattaaacc atttgacggt gcctttctgc
     3781 atcgtctttc tcctcaatca gtccatgcct cagcgcagac gcggaacagc cgccgcatac
     3841 tggtgctgcg atccgcgcca caagccagat tttgggggga aagtccgaaa cgtcatgtcg
     3901 ccaagacagc accggccggg agccaaaatc cgattgcctc gaaagcaagc ccgataaatg
     3961 cggcgcaacc atgactgcaa tgcgccacgt attagtttga attgtacatg tcgtcttttt
     4021 gtaacagacg ccgctacgtg attgctaaag tgtttgcgag ctttgaaaaa ttctcatgca
     4081 gtcgcaccgc tcggcggatc gacgcgagac tttagacttg caccgcgcca tccgactgcg
     4141 cccgcgacga cgaccagcaa cgccccagcg cccgctgcgg cggtttgcgc gagttgcttg
     4201 tgttcttcgc cgaatacggc tgtcaaagcc cgcgagacgg cggaatcatt cgcaatatat
     4261 cgccgccgac ccatccgagc agggtggcgc ccgcccagac gagaaacggg aagcggtcga
     4321 gcagcttcat gaaaaaggcc gcacccgcga ggatgatcgg cagcgagatg gcgaggccga
     4381 ccacgagcaa ggcgaagttg cctcgcgcga taccggcgag ggcgatgacg ttgtcgaggc
     4441 cgaggatgat gtctgccgtg agcacgattc tcacgaccgc cggcagattg gttgcggccg
     4501 caacggcttc ctcgcacgcg ccgcgctgca ccaagagttt gctcgcgacg tagatgagca
     4561 cgaggccccc gatcagcttg acgcaaggat aggccaacag cggcgcgacg atgaccgcga
     4621 aggtgaggag cagcagcgcc gcggtgccgg cgccaacggc gatgccccac ggccgtcgtg
     4681 ccggcggcaa tccacggcac gccagagcgg tgaccacggc agtgtcgccg gagagcacga
     4741 cgttgaccag agcgatctgc ggtacgccga tccagaaccc ggccccgccg aaactgctga
     4801 aaatcgacgg aagagaaacg ccctagagcg ccggatcgag gttttgcgca atgagaccca
     4861 actcgcttcc cgtccgcggc cgctgcccgc ccgttccgcc gtcgccggcg tcgccccgcg
     4921 cggacgagcc aggcgccgcg ggcggcacgc gcaggcgcgg ggaggtggac ttgcgtcagc
     4981 cgacgatttc gttgcctgcg aagaactggg cgatttccat cccggcggtg gcggcagcgt
     5041 cggagccgtg cacggaattc tctccaatcg atttcgcaaa agccttgcgg atcgtaccgg
     5101 gcgcggcctt ggcgggatcg gttgcgccca tgaggtcgcg ataggcagca atagcgtttt
     5161 caccctcgag gacctgtacg acgaccgggc ccgagatcat gaactcgacg agttcgcgga
     5221 agaacggccg ctgccggtgg acggcgtaga aggtttccgc ctgtgcgcgg gttatcaata
     5281 cgcgcttctg cgctacgatg cgcagtcctg cttcctcgat catcgcgttg atggcgccag
     5341 tcagattgcg cgccgtggca tcgggcttga taatcgaaaa cgtacgctcg agcgccatca
     5401 aattgtcctt ggggattgcg caggccgggg cgaaagccgc ggcggcttat agccttcggc
     5461 cccgccgacg acaagcgcgg cgccgggatg cctttgtcac cgcaggccgc cgctcacaat
     5521 tggcgcagga agtcgatcat ggcggcgttg acctccgccg cgcgttcctg ctgagtccaa
     5581 tgcccacatc ctggcagcat gatcttggcg cgcaagtgcg gcacatagtc ggtgagattg
     5641 gcgatcatct tgtccatgcc gcgaaacgcg accaccagat cgcggtcgcc ggcgacatag
     5701 agggccggca cggtcacctt ggccttcgcg aacggcgcca gaagctccca gttgcggtcg
     5761 atgttgcgat accagttgag gccgccgcca aagccagtgc gcgcgaattc gccggcatag
     5821 aaatcgatgt ccgcttcgcc gagccacggc ggcatcacag ccggcttcac catgcgcgag
     5881 agaaagccgc cgtcccgcgg caccatgccc acatcgcctt gcgcgggtgt ctggtttgac
     5941 gcgtcggcgc tgccggccga tcggcgcggc acgtcgcccg agccggagaa caagagcttg
     6001 aggatggtct cacgcgggtc gcgttccaac tcggcctccg cgacccccgg tttctggaag
     6061 tagagctgat agaacaaagc gtcgtcgcgc tgcggcatga ctgacgtcgg caccacggac
     6121 gttcgcggcc ggtaggggac gctcaggccg atcacgccgc ggaagcgatc ggggcgcagc
     6181 agggctgcat gccatgcgac cggcgcaccc cagtcgtgcc cggcgatgac cgcctgctcg
     6241 gcgccgagcg cgtccaacag ccccaccatg tcgccgacaa gatgcaacag cgtgtattgc
     6301 tcgatcgcct gcggccggtc ggagcggccg tagccgcgca tgtcgggagc gacgacgtga
     6361 aaaccggcgg ccgagagagc ggcgagctga tggcgccacg agtaccacga ctcgggaaag
     6421 ccgtggcaga ggatgactag cggcccctcc ccctgctcgg caagatgcag gcgaatgccg
     6481 ttcgcctcga ctgtccgatg ggtgacgtca gtcgccatcc atgcctccac atgcgttttg
     6541 atgttaggac gcgtcatccc ctttgggctt tgacgcgtca tcgcctttgg gctttttggt
     6601 cttcgccggc tttttgcttc ccgcaagttt tttctgctcc ggtccaggcg ccggctcggc
     6661 gacgcgatcc atctccgcga gccggccgcc tacgaaccgg tagacccccg gtcgcggacc
     6721 gctcgtgaaa gttatggccg cggtgcgctc gccgttttga ttgttgccga tgttgacggc
     6781 ggcgggccgg ccgacgcgcg cgatcacgtc gcattcgctc ataccgacgg cgaccccgcc
     6841 gcgaagctgg gcggcttcgt cgggcgcgcc cggggcggac tggcccggat tggccgcggc
     6901 ggcttgtgcc tcaggcgccg gcgctgtcgc acaggcgccg ctcgcgtcga ccaagtcgtt
     6961 cgccgtaaca gggcgctcct gtttcgcacc gccaagctga gagaagttat agccgcccct
     7021 gcgaccgaac aaatccaccg gcttcgaaaa ccagccgctc gcatcgtccg cggagcatcc
     7081 gccgagaaaa agcgccgtcg ccatcgcggc taacgcagcg gaatggattg acctcaggtc
     7141 cacggacgcg tcctcgttag agccagcctg cagcatgccc cggtttgtgt tgtgatcgtg
     7201 gcgtacggcc cggcactgtg ctagccagct tgcctcaact ttcgtcgcaa cacaacgccc
     7261 aagaacagcc gcgcgcaggc aaaacaggtg tcagaacagt accttgagga ccgtctttag
     7321 cggcgcgaac cggttagccg gaagtgaccg ccgtcacaga aatcttcacc atttgacggc
     7381 atcatcgtgg cacgaccggt catgtcggta aacttcgcgt aacttctcgg ggacggttca
     7441 tgcatctgca attcgtcggc tgcggcgatg ccttcgggtc gggcggacga ttcaatacct
     7501 gcttccacct ggtcggacgg gacatcaacg cgctgatcga ttgcggagcc acctcgctcg
     7561 tgtcgatgaa taggctcgcg atcaagcgca acgaggttga tttcatcttt ctttcgcact
     7621 tccacggcga tcacgttggc ggcgtgccat tcttcgttct ggaagcgaac tacatcgtca
     7681 aacgcgaccg gcccctcacc atcgtcggac cgccaagcct caaatcgcgc tacccgcaga
     7741 tcatggacac cggctttccc ggcgccaaag cgatggagtt gcgatttccc ctgatgctca
     7801 gagaggtgga gatcggccgc cgcaccgagt tcgggccgtt gcggctgacc gcctaccatg
     7861 tcgtgcacga tgatcgcgct gggccatgcc tgggattgcg ctttgaggcc gaagggaaag
     7921 tgatcgcctt ctccggcgat accgaatgga ctgacgcgct cgtcgatgtc gcccgcgacg
     7981 ccgacctctt catctgcgag gcctacacgc gcgacaagcc ggcgccgacc catatggcgc
     8041 tgtcgctgct cgagcctcat ctcgtccgga ttcgccccaa gcgtctcatc ctgacccata
     8101 tgagcaacga catgctggcg cggcgcgccg agcttccgta cgagaccgcc gaggacggca
     8161 tgatcgtgga gctttgagcg gcgccgaagc ggcgaccgcg gctctctggc gcccctgcac
     8221 gtcgacctat ccgccgagcg ccgcctcgat ggcggcaagc gcagcgtcag ccttcgagcc
     8281 atcgggccca cccgcctgcg ccaagtccgg ccggccgccg ccgcctttgc cgccgagcgc
     8341 ctcggccccc ttgcgcgcca gatcgacggc attgaagcgc ccggtcaggt cgggggtaac
     8401 gccgacgacg aggccggcct tgccttcgcc ggtaacgccg acgatggcga cgacgccgga
     8461 gccgaccttc ttcttgcctt cgtcggcgag gccgcgcagc tccttgagct cgatgcccgc
     8521 gacggaccgc gccatcagcc tgatgtcgcc gacggtgcgc acgccgccgg cgctgtcact
     8581 cccgccgccg cccatggcga gtttcttctt cgcctcggag agctcgcgtt cgagccgctt
     8641 gcgctcggca acgagcgctg cggcacgcgc cgtcacctcc gcaagcggcg cgttcatttc
     8701 agcggcgagg agcctgatgt cgttgcgatg ccggttgagc tccttgcgcg ccgccgttcc
     8761 ggtcaacgcc tcgatgcggc ggacgccgga ggcaaccgcc ccttcggcaa tgaccgagac
     8821 gacgccgata tcgccggtgc gccgcacgtg cgtgccgccg cagagctcga ccgaccagcc
     8881 cagcgcgttg ccgcccttcc ccatggccac cacgcgcacc tcgtcgccgt atttctcgcc
     8941 gaacaaggcg cgcgctcccg aagcgacggc gtcgtcgcgg cccatcagcc gggtgatcac
     9001 cggcgcattc tgcagcacga catcgttggc gatgtcctcg atgcgctcga tctcgccggc
     9061 cgtcatcggc ttcggatgcg agaagtcgaa ccgcagccga tcgggcgcga ccagcgagcc
     9121 cttctgcgcc acgtgatcgc cgagcacctg ccgcagcgcc tcgtgcagga ggtgggtggc
     9181 cgaatgattc ttgcggatgg cgccgcggcg ttcgtgatcg acctcgaggg aaagcggcgt
     9241 gccgaccttg agtgtgccct gctcgacctt gccgaggtgc acgtagagat cgccggcgcg
     9301 cctttgcgta tcggtgaccg cgaagcgtac cccttcgccg gtcatcgctc cggtgtcgcc
     9361 gacctgacct ccggattcgg cgtagaacgg ggtctgattg aggatgaccg caccgctctc
     9421 gccctgcttg agcgtggtca ccgccttgcc gtcgcgcaca agcgcagcga ccgcaccggc
     9481 ggcgctttcg gtctcatagc cgaggaaatc ggtgccgccg acgtgctcgc gcagggtaaa
     9541 ccacaccgct tcgtccgccg cttcgccgga gccggtccac gaggctcgcg ccttctcgcg
     9601 ctggcgctcc atggcgtcgg tgaacgcggc gagatcgaca ccgataccgc gcggcttaag
     9661 cgcgtcctgg gtgagatcga gcggaaagcc atacgtgtcg tagagcgtaa atgctgtgac
     9721 gccgtcgaac atggcgccgc gcttgagctc tttgctctcc tcgtcgagga tcgcaaggcc
     9781 gcgctcgagc gtgcggcgga agcgcgtctc ctcgaacttg agcgtctcgg tgatcagcgg
     9841 ctcggcgcgc agcaattccg gataggccag gcccatctcc cgcaccagca ccggcaccag
     9901 ccgccacatc agcggctctt tctccccgag cagctcggca tggcgcatgg cgcggcgcat
     9961 gatgcgccga agcacgtagc cgcggccctc gttggacggc agcacgccgt cggcaatcaa
    10021 gaacgaggag gcgcgcaggt ggtcggcgat gacgcggtgc gaggcctggt gcgcaccctc
    10081 ggggtcgacg ccggtggcgt cggcgaccgc ctcgatgagt gcgccgaaca gatcgatctt
    10141 gtaattgtcg tgcgtaccct gcagcaccgc ggcgatgcgc tcgagcccca tgccggtgtc
    10201 gatcgacggc cgcggcaggc cgacgcgctc gccaccggcg agctgctcgt actgcatgaa
    10261 caccaggttc cagatttcga cgaaacggtc gccgtcggcg tcagggcttc ccggcggtcc
    10321 gcccggtatg tgcgcgccgt gatcgtagaa gatctccgaa cacgggccgc aaggcccggt
    10381 gtctcccatg gcccagaaat tgtccgaccc ggcaatgcgc ccgatccggc tctcgggcag
    10441 cccgccaatc tttttccaga gattgaacgc ctcgtcgtcg tcgatataga ccgtgaccat
    10501 caggcggtcg gccggcacgc cgaactcttt ggtcaccagc cgccacgcta gctcgatggc
    10561 gcgctccttg aagtaatcgc cgaacgagaa attgcccagc atctcgaaga aggtgtggtg
    10621 gcgcgcggtg tagccgacat tgtcgagatc gttgtgcttg ccgccggcgc gcacgcattt
    10681 ctgcgccgtg accgcccgcg tgtaggggcg cttctccagg ccggtgaaga ggttcttgaa
    10741 ctgcaccatg ccggcattgg tgaacatcag cgtcggatcg ttgcgcggca cgagcggcga
    10801 agagggcacg acttcgtgcc cctcgcgtgc aaaataggcg aggaaattcg ccctgatttc
    10861 gttgacgccg ctcatttgcc gcaactctct agcggggcgt atgtttcgtg tccaggaagg
    10921 tgcaattgca ggacgcccgc aaagcatata agcgctctca ttccgattcg cgccccggag
    10981 cgggactggc gatgaacgag caaaacaccc cgcaaccgcg cactttcgaa gagcggctgc
    11041 aggcgcgccg gttcgtcatg accgcggagg tcaccccgcc gctctccttt gacccggagg
    11101 acctgctgcg caaggcggcg ccgctgcggg gcctggcgga cgcggtcaac gtcaccgatg
    11161 gcgccggcgc ccgcgcccat atgggcgctc tcgcggccgc ggcgatcctc gatcgcgccg
    11221 gcatcgagcc gatcctgcag atcgcctgcc gcgacaagaa ccgcatcgcc ctgcagagcg
    11281 aactgatggg cgcggcggca ctcggcatcc gcaacctgat gctgctcggc ggcgacgacc
    11341 cgaaggcggg cgaccagccc gagaccaagg ccgtgttcga catcgactcg aagacgctga
    11401 tcgagaccgc gcgccggctg cgcgacgacg gcacactgcc gaccggccgc aaggtggccg
    11461 gcagggccgc attcctcatc ggcgccgccg acgttccgct cgacccgccg gcggggtggc
    11521 agcccgcggc actgcacgca aaagtctcag ccggcgccca gttcgtgcag acgcaattct
    11581 gcatggatgc ggcgatcgtg cgccgctacg tcgcggcgct cgagtcggcc ggcctcacgc
    11641 ggcaactcgc gcttctcgtc ggcgtcacgc cgctgcgctc ggcaaaatcc gcacgatgga
    11701 tgaaggaccg cctgttcggc accatcatcc ccgacgcgct gatcgcacgc atggatgagg
    11761 cggccgatcc ctcgcacgag ggcgtgcaca tctgcgtcga gctgatcgag gagctctcga
    11821 ccattcccgg ggtcgccggc gtccacatca tggcgccggg aaacgacgcg gccattccgg
    11881 aaacgatcga ggcggcgcgg gcgaaggtga aaagcgcgac tcgctaaagc tgcgcgccac
    11941 cgacgcaaac acaaagaagg gccgccctcg cggacagccc ttccattgtc aggccgtggc
    12001 ccggttgcgt aggcgatcgt ctgccttacg cgcgtgagcc cgtcggcgga ttagaccgcc
    12061 taggcgagga cctcggcaga ggcgaggatc cagctcacga atgccggcga ccgcggcgat
    12121 agacaatgag acactggatc acctcctttc ggttgttgac gacggagcca atatagcgcc
    12181 tccgcagcga ttcggaaggc gggctttgtc agggatggcc acgtcgcggc ggcgaacgga
    12241 tgaggagagc ctacctcccc aactcccgca tcgcctgatc gagcccctcc aaagtcagcg
    12301 gatacattcg gccgccgatg agctggcgca tcatcttgat cgaagcggtc agctcccatt
    12361 cgcgctcggg caccggattg agccagacgc aggacggata ggtggaggtt aggcgctcca
    12421 tccacacctg gccggcctcc tcgttgaagt gctcgaccga cccgcccggc gcggcgatct
    12481 catagggcga catcgacgcg tcgccgacga agatcacctt gtagtcgtgc gggtaggtgt
    12541 ggagcacgtc ccaggtcggc gtcgactcgg tccagcggcg cgcgttctcc ttccacacct
    12601 tctcgtagag gcagttgtgg aagtagaggt gcaccatgtg cttgaactcg gtcttggcgg
    12661 cggagaacaa ctcctcggtc accttgatgt gccagtccat cgagccgccg atgtcgaaga
    12721 acaagagcac cttgatggtg ttgtggcgct ccggccgcat gaggatgtcg agatagccct
    12781 tctgcgccgt gcccttgatg gtgccgtcga gatcaagctc ctcgggcgcg ccggtgcgag
    12841 cgaatttgcg cagccggcgc agcgccagct tgatgttgcg ggtgccgagc tcaacgtcgc
    12901 cggcgaggtc cttgaaatcg cgccggtccc aaacctttac ggcgcggaag ctgcggttgc
    12961 cgtcctggcc gatgcgcacg ccctcgggat tgtagccata ggcgccgaac ggcgaggtgc
    13021 cggcggtgcc gatccatttc ttgccgccct ggtggcggcc cttctgctcg gcgagccgct
    13081 ggcgcagcgt ttccaggagc ttctccaggc cgcccatcgc ctcgatctgc cgcttctcct
    13141 cctcggtgag atgtttctcg gtgagcttct tgagccattc cagcggaatt tccgcagtga
    13201 gcgcctcggt gatgaaatcg aggcccttga aaacgtggcc gaacacgcgg tcgaacttgt
    13261 cgaggttgcg ctcgtccttc accagcgccg agcgcgacag atagtagaaa tcctcgaccc
    13321 ggcggccggc gaggtccttc tccatcgcct ccatcagggt gagatattcg cgcagcgtca
    13381 ccggaaggcc ggcctgcttg agctcgtgga agaaggtcgc aaacatcgcc gcgtgctact
    13441 tcatgtcggt ttcgcgctgc gggttgatcc atgcaacgcg acaaggaagc atatcgggcg
    13501 cgccagccga cgccaaacgg caagcgccgg ggatcagacc ggcaccttga cagtcgcccg
    13561 caggccgccc agcggcgagt cgctgagcgt gatgtcgccg ccgtgggacc gggcgatgtc
    13621 gcgggcgatc gcgagaccga gcccggtgcc gccctcgtcc tggttgcgcg catcgtcgat
    13681 gcgcagaaac ggcttgaaca cttcctcgcg catctgcagc gggatgcccg gcccgtcgtc
    13741 gtcgacgctc accgtcagcc agcgatgatc gcggtgcccg gtgatggcga cggcggaggc
    13801 aaagcgcgcg gcattggaga cgagattggc gaggcagcgc ttgaacgccg ccggccggac
    13861 tgtcacgatc ggctggccgt ggaaggcgac gcttgcccga tgaccgtggc gttcactatc
    13921 gagcttgagc tcgtcgagga ggagcgcgat gtcggtcggc gccgactgtt cgcccgtatc
    13981 cccgcgcgcg aaggcgagat aggcttcgag catcgccgcc atctcatcga catccttctt
    14041 gatcgcctcg gtctcggcag tgtcgccgaa cagagcgagc tcgagcttga agcgcgtgag
    14101 caccgtgcgc agatcatgcg acacgccggc gagcatagtg gtgcgctgct cgatcgagcg
    14161 ctcgatgcgc gacttcattt ccaggaacgc ggcggccgcg cgccgcactt cggtcgcgcc
    14221 gcggggacgg aaattcggcg cttcgcggcc tttgccgaag gcgtcggcgg catcggcgag
    14281 gcgcacgatc ggtcggatct ggttgcgcag gaacaggatg gcgaccgcga gcagaaccag
    14341 cgaggtcgcc accatccaga tcaggaacat ccaggagttg gcgtcgtaga cgtcggtgcg
    14401 gcgggcgaag acccgcatga ccgtgtcggc gagctggatc cggatctcga cgatcgagga
    14461 gcggccgacg gtgtcgatcc agaacggcag cttgatctcc ttgcggatct cctccgacag
    14521 cgcctgatcg agctgcgaga agaacggctt cggtccaggc ggcggcagct gcgtctcggg
    14581 gaggaaatcg accgcgaggc cgagccggtc ctgggcgatg cggcgcaatt gcgcgcggtc
    14641 ggcgccctgc ggataggaat tgtagacatc gatgagggtg gcgatctcct gcgtcaccgc
    14701 ggacgacagg taacgcgtca ccaggctcca ctgccggtcc atgaacatga aagcgaccac
    14761 ggactgcagc accaccatcg gcacgatgat gatcagcagc gagcgagcat agagcccctt
    14821 cggcatcacc gacttgatcc agcgggtgac gcggtcccag aagcgcccaa cggcgccagt
    14881 aatcgaaccg gcggcgttgg ccgctgctcc ggcggcggtc accagatggc cggcggcgct
    14941 gcgcccgcgg ccagcgcggt cgtcgaagcc ggtcgcggtg ccgctcacgg cgtcgccacc
    15001 agtcggtagc cgacgccacg caccgtctgc acgatcaggg ggttggcggg atcgttctcg
    15061 atcttgcggc gcagccggtt gacctgcacg tcgacggtgc gttcaccgac gctgtcaccg
    15121 ttggtgccgg caagcgcctg gcgcgggatg gtctcgccca cgcttgcggc gagcacgcgc
    15181 agcatctcgc gttcgcggtc ggtcaggcgg atcacttcct cgccgcggcg caattcgcca
    15241 cggccgaggt gaaagatgaa cgggccgaac cgcaccgatt ccgctggcgg cgcgctcggc
    15301 ggccgcaccc gcttaaggat attggcgacg cgcagggaca gctcgcgcgg ctcgaacggc
    15361 ttggccagat aatcgtcggc gccgatttcg agacccttga tgcggttctc cttctcgtcg
    15421 cgcgccgtga gcatgaggat cggcaccgtc gatccggtgc gaatggcgcg ggcgaggtcg
    15481 aatccgttct cgcccggcat catgacgtcg aggatgagca ggtcgaactt caggccttcg
    15541 agcttggccc gcgcttcgcg cgcggtttcc gcggtggtga cgcggtagcc ctcgccgaga
    15601 agaaagcgca gcagcagcgc gcggatacgg cggtcgtcgt cgacgacgag caggtgaggc
    15661 gcgtcgtcgg ccggattcgc ggcgtgagtc gccgtcatga agcgccgtct cggcgctgtg
    15721 cgccgtcggc gcgcgcaatc aggcgcagga cctggtcgcg gtcctcggca tcgatcatgc
    15781 cggcaaggaa gcgctgcacc tgatcgcggg cgccgggacc gagttcggcg agcacgcgcc
    15841 cgatgcgctc ggtctgcatc ccggcaagcc tcatcgccag cgcctcgccg gcgtcgctga
    15901 cgtagagcag ccgctggcgg cgatcgttgg ccccctcctt ctgcacgatg tgaccttcgt
    15961 cgatgagctg cttgagcacg cgaccaagcg actgcttggt gattttgaga acatcgagca
    16021 gctcggcgac cttcattccc ggattgcggg tgacgaagtg cagcacgcgg tggtgcgcgc
    16081 ggccgaagcc gagcgtgacc agaacttcgt cggggtcgcc gacgaagtcg cgataggcaa
    16141 agaagaagag ctcgatcagg tcccagcaag gctgccccgg tgccggcgcc ggcttgggcg
    16201 ccgcgaccgg gcgaagctta cttgcagttg tgatactgaa gtcggccatt atgtcagcta
    16261 tattgacata tttcccgttg attgttaccc ctggaagcgc gatgtcacct agcatcgcac
    16321 ccgccctgcc ccagcacgat gtcgttgcat cgggcgcgac agggcgcttc acggagcggc
    16381 gtgaccatac cgggagtccg cttccgacgc aaaaagcccg gggcccggcc aacggcggcg
    16441 ttccgacccg catcgggcca tttgcactag ggaggcaatg ccatggcagt gcccttcgac
    16501 cagcgttcgg acctcatctg gttcgacggc aagctcgtcc ccaccgccga ttgcaagatc
    16561 agcgtgctaa cccacggcct tcattacgca agctgcgtgt tcgagggcga gcgcgcctat
    16621 ggcggcgagg tgttcagagg taccgagcat tccgagcggc tcaagcgctc ggcgcagctg
    16681 atggatttcg agattcccta cagcgtcgcc gagatcgacg ccgccaagcg cctggtgctc
    16741 gagaagaaca accagaagga cgcctatgta cggccgctcg cctggcgcgg ctccgagcag
    16801 ctcggcgtct cggcgcagaa taacaagatt cacctcgccg tcgccacctg ggaatggccg
    16861 agctacttcg acccggcgca acggctcaag ggcatccgcc tcgatctcgc cgagtaccga
    16921 cgtcccgatc cgaagacgat accggcgctc gccaaggccg caggcctcta catgatctgc
    16981 accatctcta agcaccgcgc cgagcggcgc ggctatgccg acgccatgat gctcgattgg
    17041 caggggcgcg tcgccgagtg caccggcgcc aacatcttct tcatcaagga cggcaagatc
    17101 cacaccccga tcgccgattg cttcctcgcc ggcatcacgc gcgcgaccgc gatgtcgatc
    17161 gcccggcggc acaacatcga agtggtcgag cggcgcatcg tgcccgaaga actcgccggc
    17221 ttctcggagt g
//
LOCUS       DATMQB010000301        11733 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3215201, whole genome shotgun sequence.
ACCESSION   DATMQB010000301 DATMQB010000000
VERSION     DATMQB010000301.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11733)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11733)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11733
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3215201"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..258)
                     /locus_tag="VNY79_08695"
     CDS             complement(<1..258)
                     /locus_tag="VNY79_08695"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HWX72564.1"
                     /translation="MTLQTQGPPAQRTTGAVDPIWFASYPPGVPKNIDPDAYPSLPTM
                     LLDTCMRHAARAAFECLDTRMGYAEWERASRAFAAFLVEQAK"
     gene            complement(255..461)
                     /locus_tag="VNY79_08700"
     CDS             complement(255..461)
                     /locus_tag="VNY79_08700"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72565.1"
                     /translation="MANIATAAAIAIGLPMWIRAVVGPPAPLADLDSATATFCSTLPT
                     EALRAADSRHDAPTPPAPSGDRSP"
     gene            complement(617..2047)
                     /locus_tag="VNY79_08705"
     CDS             complement(617..2047)
                     /locus_tag="VNY79_08705"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HWX72566.1"
                     /translation="MWKTRVSTYAVGAAACLAAVGGLAQAAQKPAGGGGGAHPAFHAV
                     GGGGHPAFHPSGPARLNVGPAHIGTPHITTRHIGPVGTTHLPTTTHLPVTTLGTHALI
                     TNNKLTPTKIIANPALAHHLATLKTNPHNFAQHRNLAANSALHPFLAQHMNMQHYHHH
                     LGWVGPLFWPFAYGSVFFFALWPDDYGFYDPFWAYGYNDIYEGIFSPYVYDHYVQGPG
                     APARMTQLAQGMADACATEAAEVTGWPIDQIQATVEPSDQQRALLDDLGNAVVQASDS
                     IKSNCPTSVAFTPTGRLAAMQQRLQGMVQAVNIVEPPLGKFYDSLNEEQKARFDAMGA
                     ATAGAATAGATTADAATAGQGRRNQPPAEGGNPQAACGSNVTAWPADKIDRVVQPNDA
                     QRAKLDALQSAAAQAADAIKAAYPSGEPPHTPPGRLAAVGKRLQAMLQAVETVQPALQ
                     DFYNSLGDDQRARFNTMGRQLSAVEQ"
     gene            2517..4361
                     /locus_tag="VNY79_08710"
     CDS             2517..4361
                     /locus_tag="VNY79_08710"
                     /inference="COORDINATES: protein motif:HMM:NF017736.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF882 domain-containing protein"
                     /protein_id="HWX72567.1"
                     /translation="MSATHAGLSCGVAALLLLSGARGLQNAIAEGDTRSISLHHIHTD
                     EDITITFKRNGQYDEAAIEKLNWFLRDWRRNQQTRMDPHLIDLIWEVHRETGAKEPVW
                     VVCGYRSPQTNAMLRHRSRGVARFSQHMLGHAMDFYIPGVPLDQLRAAGLRLQRGGVG
                     FYPTSGSPFVHLDTGSIRHWPRMTREQLSRVFPDGRTVHVPTDGRPLAGYAVALADVK
                     RHGSNPSEMSIDAARSAGVNVEVASAEHRGVKRFMKLLGIGKHNDDEEEADASASAPA
                     EPASPPAAAIPLRTRAKAAVVAAVERAEDKIAAEKTKLAQAVAKIHLVRRAEAAPAPA
                     AAAPASAAAPAPAPAAAPAAALAAARAPAAVAAPAAEAVPAPAPTKETSETPTRAAAD
                     TPHDIIIARGFWQGLPDGVSAAQPAPTATKPLASGATARRAGVAIADADPIGSLTPWS
                     EEAIDRAPSGLALAYAEPPGRDVPVPAAPVGAQKPRTVVTAALAARAGGDEMTIAVKR
                     VGDRPASAILTVTNRISSALADGERLNDPWLRAIVLSPSVCRFLTAATLGAHDLRSLA
                     AQIVKPASSVMMTFAAEPNPGLDHDHFSGSAIVFVSTVTYPTRTASLH"
     gene            complement(4626..4901)
                     /locus_tag="VNY79_08715"
     CDS             complement(4626..4901)
                     /locus_tag="VNY79_08715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2312 domain-containing protein"
                     /protein_id="HWX72568.1"
                     /translation="MSTAAAVKDDQPAHRFAKDQLKAFVERVERLEEEKKAIADDIRD
                     VYGEAKANGFDTKALRTVVRLRKQDLNERKEQEAILETYLHALGMLS"
     gene            complement(5038..5340)
                     /locus_tag="VNY79_08720"
     CDS             complement(5038..5340)
                     /locus_tag="VNY79_08720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1244 domain-containing protein"
                     /protein_id="HWX72569.1"
                     /translation="MAADEKSRMELEAAVFRRLVEHLRARTDVQNIDLMNLAGFCRNC
                     LSNWMKDAADERGLPMTKDESRELVYGMPYEEWRAKHQKEASAAQKAAFEKASQKH"
     gene            5521..6807
                     /locus_tag="VNY79_08725"
     CDS             5521..6807
                     /locus_tag="VNY79_08725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HWX72570.1"
                     /translation="MDRTARAFLESLFRSAVAAAHPAAVLPANLPEPPARGRLVILAA
                     GKAAGAMTEVAEQRYLALLPRQRLAGLAVTRHGYGRPTQLVPLIEAGHPVPDAAGIST
                     TRRVLALADAVDAEDLVLVLLSGGASANWIAPVGGLTLAEKQAVTRALLKSGAAIGEM
                     NTVRKHLSRIKGGRLAARAFPAEVTTLAISDVPGDDPAVIGSGPTVPDPTTLADARAV
                     VARYRLDLPERVTHALSDAANETPKPGDKIFERSSYRIVARPADSLHAAAERASAAGY
                     ETVMLGDRLQGEARKVAAEHAKLARALSREGRRAVVLSGGELTVTLRGKGRGGPNQEY
                     ALALAIHLDGADGIAALAADTDGTDGGGGRADDPAGAFVDATALARARAAGLDPAAFL
                     ADNDSTGFFNAIGDLFTTGPTFTNVTDFRAIVVDGQ"
     gene            6877..7389
                     /locus_tag="VNY79_08730"
     CDS             6877..7389
                     /locus_tag="VNY79_08730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018268748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1036 domain-containing protein"
                     /protein_id="HWX72571.1"
                     /translation="MLSVVTMIGLAVSAGAAAADFRLCNNTGSRVGVAVGYKDADGWT
                     TEGWWNLPSRSCETVLKGNLVARFYYIYAIDYDRGGEWMGTAVMCTRDKEFTIRGIGD
                     CLARGYDRTGFFEVDTGEQRAWTVQLTESSEQTPQHPLRPGNPLAPPPAGVRAPGAKG
                     APLAPGSQGK"
     gene            7386..8822
                     /gene="pyk"
                     /locus_tag="VNY79_08735"
     CDS             7386..8822
                     /gene="pyk"
                     /locus_tag="VNY79_08735"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004743 - pyruvate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006096 - glycolytic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HWX72572.1"
                     /translation="MRRRRRTKVVATLGPASSGRIIIARLFEAGADVFRINMSHTTHE
                     KMRELVSTIRAVEAECNRPIGILVDLQGPKLRLGSFRNDWAEIDNGQDFILDSDPAPG
                     DATRVHLPHPEIFAAIKVGDTILIDDGKLRLVVAETSPQRVVARVEVGGKVSNRKGVS
                     LPHTVVPLAALAPKDLADLEAALDAGIDWVALSFIQRPEDIAEAKKITRGRAAVMAKI
                     EKPQAVTRLGDILDLADALMVARGDLGVEMPLEKVPGVQKEMTRACRRAGKPVVVATQ
                     MLESMITAPVPTRAEVSDVATAIFDGADAVMLSAESASGQYPVEAVATMNRIAEEVES
                     EPIYLSSIHVLHTEPERTGADAIAAAARQVAETLDLSAIVCWTSSGSTGLRLSRERPQ
                     PPIVAISPIVAAGRKLSIAWGIHCVIAEDARDQDDMVERACRIACREGFASAGQRVIV
                     VAGVPFGTPGTTNMIRVAFIGPDNEAAA"
     gene            complement(8851..9795)
                     /locus_tag="VNY79_08740"
     CDS             complement(8851..9795)
                     /locus_tag="VNY79_08740"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HWX72573.1"
                     /translation="MHTLAVVAVLLGVGAAVTFIGVRLIERAHPPRGRFIEINGLRQH
                     VVEIGEHAGAADAPAIVLLHGAGCNLEDMRLALGERLAAHYRVILLDRPGLGWSERRG
                     GEGSSPTYQAAMLNAVLDRLEVGRAIVVGHSWGGLLSLTFALDYPQRVAGLVAIAPPT
                     HPWLGPKTWFNSVFSIPVAGWLFAHTLTLPLGALLIGPGFRGAFRPQPSPPGYMKRTA
                     ARLLLRPKTLLANSADIARLKAFLKRQAGRYGTLATPTIVITGDCDPVVPAQHHAMRL
                     ATAAPSARLEMLPGFGHLLHHAAADRIVAAVEELISRA"
     gene            complement(9829..10431)
                     /locus_tag="VNY79_08745"
     CDS             complement(9829..10431)
                     /locus_tag="VNY79_08745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009031792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HWX72574.1"
                     /translation="MADIAADKAVIRELVENWVLWRDARLWDRFRTVWHADGRMMATW
                     FQGSFEDFIKANDEGWARGVRILHFLGGSAIGVAGDRAIAQTKMTISQRAPVEGVVSD
                     VVCTGRFYDFFERRDGRWGLVLRQPIYEKDRIDPVDPSAELTLDQDLLRRFPEGYRHL
                     AYLQTRVGYQVKPDMPGIEGAELDALYARGARWLNGKPVL"
     gene            complement(10567..11205)
                     /locus_tag="VNY79_08750"
     CDS             complement(10567..11205)
                     /locus_tag="VNY79_08750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HWX72575.1"
                     /translation="MGSRFSSLAVAAILAAPLVAATPAATQVKPDAPAAPDWAKPRGD
                     AQRPERGERTYNLDTLFEALKIAPDEASAKALEDRIWALWMVSGSDTCNLLMGRAKAA
                     ADGKDYGLAIKLLDAVVELRPDYAEGWNRRATVYYLQKDYSHSLADIREVLAREPRHF
                     GALSGLGAILQEIGDDKHALEAYRRALAIDPHLEHVGEVVKTLTEKVEGRAI"
     gene            complement(11401..11526)
                     /gene="ykgO"
                     /locus_tag="VNY79_08755"
     CDS             complement(11401..11526)
                     /gene="ykgO"
                     /locus_tag="VNY79_08755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012177066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L36"
                     /protein_id="HWX72576.1"
                     /translation="MKVRNSLKSLRGRHRDNRIVRRKGRVYVINKTHRRFKARQG"
BASE COUNT         1881 a         3955 c         3947 g         1950 t
ORIGIN      
        1 tttcgcctgc tcgacgagga aagccgcaaa ggcgcggctg gcgcgttccc actcggcgta
       61 gcccatgcgc gtgtccaggc attcgaacgc cgcgcgagcg gcatggcgca tgcacgtatc
      121 gagcagcatc gtcggaagtg acggataggc atccggatcg atattcttgg gcacgccggg
      181 cggataggac gcgaaccaga tcgggtcgac cgcgcccgtc gtgcgctgcg ccggaggacc
      241 ctgcgtctgg agtgtcatgg cgatcgatcc ccggagggcg ctggcggcgt cggcgcgtcg
      301 tgtcgcgaat cggcggcgcg gagagcctcc gtcggcaatg tagagcagaa tgtcgccgtg
      361 gcggaatcaa ggtcggcaag cggcgcgggt ggcccgacca ccgccctgat ccacatcggc
      421 aggccgatgg cgatcgccgc ggccgtggcg atgttcgcca cggccgtccg tctgtgtgct
      481 tctgctgctg gcctatgacc gtccgttcgc ttttggcggc atcaccataa cccccgcggc
      541 ctgccgcgag atcatggtcg attgatggag gtcgccggca cgccgagcga ccagtttcac
      601 gcgcgacaac cttggttcac tgctcgaccg cggagagttg ccggcccatc gtgttgaagc
      661 gcgccctctg gtcgtcgccg agcgagttgt agaaatcctg cagcgccggc tgcaccgtct
      721 cgacggcttg cagcatggcc tgcagccttt tgccaaccgc ggcgagacgg ccgggcggcg
      781 tgtgcggcgg ttcgccggaa ggataggcgg ccttgatcgc atcagcggcc tgtgcggcgg
      841 ccgattgcag cgcgtcgagc ttcgcccgct gtgcgtcgtt cggctgcacg acgcgatcga
      901 tcttgtcggc cggccaggcg gtgacattgc tgccgcacgc ggcctgcgga tttcctccct
      961 ccgccggcgg ctggttgcgc cgcccctgcc cggccgtggc ggcatccgcc gtggtcgcac
     1021 ccgccgtggc cgcacccgcc gtggccgcac ccatggcgtc gaagcgggct ttttgctctt
     1081 cgttgagcga atcatagaat ttgccgagcg gcggctcgac gatgttcacc gcctgcacca
     1141 tgccttgcag gcgctgctgc atcgccgcga gccggccggt tggcgtgaac gcgacgctgg
     1201 tcgggcaatt cgacttgatg ctgtcgctcg cctgcacgac ggcgttgccg aggtcgtcga
     1261 gcaaggccct ttgctgatcg ctcggctcga ccgtcgcctg aatctgatcg atcggccagc
     1321 cggtcacttc ggccgcctcg gtggcgcagg cgtccgccat gccttgcgcc aattgcgtca
     1381 tccgcgcggg cgcgccaggt ccctgcacat agtggtcgta aacgtagggc gagaagatgc
     1441 cttcgtagat gtcgttgtag ccgtaagccc agaacgggtc gtagaagcca tagtcatccg
     1501 gccacagcgc gaagaagaag acgctgccgt aggcaaacgg ccagaacagc gggccgaccc
     1561 agccgagatg atgatggtag tgctgcatgt tcatgtgctg ggcgaggaac ggatgcagtg
     1621 cgctgttggc ggcaagattg cggtgctgcg cgaaattgtg cgggttggtt ttcagcgtcg
     1681 ccaggtgatg ggcgagagcc gggttggcga tgatcttggt cggcgtcagt ttgttgttgg
     1741 tgatcagggc gtgcgtgcca agcgtggtta ccggcaagtg cgtcgtcgtt ggcaggtgcg
     1801 tcgtccccac cggcccgatg tgacgtgtgg tgatgtgagg cgtcccgatg tgagcgggcc
     1861 cgacgttgag gcgcgcgggg ccgctcgggt ggaacgccgg atgaccgcca cctccgacgg
     1921 cgtggaaggc aggatgagcg ccacccccgc ctccagctgg cttctgcgcc gcctgtgcca
     1981 gaccgcccac ggcagccagg caggccgcgg cgccgacggc gtaagtgctg acccgagttt
     2041 tccacatggg cgtgcctcct gatttctttg tctagccgcc acgatcgccc cggcgcgtgc
     2101 cggaattgca gcgctgcccg caatggcaca gcggcggtgc atccggtcgg cgccggccaa
     2161 taagcgattg gcaggcatca ccttatcatg ttctgcccga tcgctcatgg tcgatgagcg
     2221 agccgggggc aggcgccccg gagataccaa ggcttaacta tgttcttctt ttgtaccaat
     2281 tgcgcccgct ccccgccaag tgggttgatg ccggtggcca tattttgcca cactgggcga
     2341 gtagtcgtat tcgggtcggg ggtggggtgg ccaaaaagtt cgcgttaacc cttcccaagt
     2401 taacactgcg ttaggggtat tcgccgcagc gggctgttgc ggcggatggc gtcagtcaac
     2461 gggtcaacgc gagattgcca gtgtctggtg gtggggaccg cctgaaaagc tgtcgtatgt
     2521 ccgcgacgca cgccggtctc tcgtgcggcg ttgctgcgtt gctcctcctc tccggcgcgc
     2581 gcggtctgca gaacgccatc gctgagggcg acacgcgcag catttcgctc catcacatcc
     2641 acaccgacga agacatcacc atcaccttca agcgcaacgg ccagtatgac gaggcggcga
     2701 tcgagaagtt gaactggttc ctgcgcgact ggcggcgcaa ccagcaaacg cgcatggacc
     2761 cgcacctcat cgatctcatc tgggaggtgc accgggagac gggggcgaag gagccggtct
     2821 gggtcgtgtg cggctaccgt tcgccgcaaa caaacgcgat gctccgccac cgcagccgcg
     2881 gtgtggcccg cttcagccag cacatgctcg gccacgcgat ggacttttat atccccggcg
     2941 tgccgctgga tcagctccgc gccgcaggct tgcgcctgca acgcggcggc gtcgggttct
     3001 atccgacctc cggttcgccg ttcgtccatc tggacacggg cagcatacgg cattggccgc
     3061 ggatgacgcg cgagcagctc agccgcgtct tccccgacgg gcgcacggtg cacgtcccga
     3121 ccgatggtcg cccgctcgcc ggctatgcgg tcgcgctcgc cgatgtgaag cggcacggca
     3181 gcaacccgtc ggagatgtcg attgatgccg cccgcagcgc cggcgtgaac gtcgaagtgg
     3241 cgagcgccga gcatcgcggc gtcaagcggt tcatgaagct tctcggtatc ggcaagcaca
     3301 acgacgacga agaggaggcg gacgcctccg cgtcggctcc cgccgagccc gcgtcacccc
     3361 cggctgcggc catcccgttg cgcacgcggg cgaaggcggc tgtggttgcc gctgtcgagc
     3421 gcgccgaaga caagatcgcg gcggaaaaga ccaagcttgc tcaggcggtc gccaagatcc
     3481 acctggtccg ccgcgccgaa gcggctccgg ctcccgcggc ggctgctccg gcttctgccg
     3541 ccgccccggc gcctgctccc gcggccgctc cggcagcagc cctggctgcc gcccgggctc
     3601 ctgctgcggt cgcggctccg gcggctgagg ccgtaccggc gcctgcgccg acgaaagaaa
     3661 cgagtgagac gccaacccgc gccgctgcgg acacgccgca cgacatcatc atcgctcgcg
     3721 gcttctggca gggcctgccc gacggtgtgt cggcggccca accggcgcct accgcgacga
     3781 agccgctcgc gagcggcgca accgcgcgcc gcgcgggggt ggccatcgcc gatgccgacc
     3841 ccatcggctc gctaaccccc tggtcggaag aggccatcga ccgcgcgccg tccgggctgg
     3901 cgctcgccta cgcggagccg cctggccgcg acgtgcccgt ccccgcggcc ccggtcggcg
     3961 ctcagaagcc gcgcaccgtt gtcactgcgg cgcttgccgc gcgcgccggc ggcgatgaga
     4021 tgacgatcgc ggtcaagcgg gtcggcgacc ggccggcatc cgcaattctt accgtcacca
     4081 accggatttc gtcggctctg gcggatggcg agcggctcaa cgatccgtgg ctgcgcgcca
     4141 tcgtcctgtc gcccagcgtg tgccgcttcc tcaccgcggc cacccttggc gcccacgacc
     4201 tccgctcgct ggcggcgcag atcgtcaagc cagcgagttc ggtcatgatg acattcgcgg
     4261 ccgagccgaa tcccggcctc gatcacgatc acttcagcgg cagcgcgatc gtgttcgtat
     4321 cgaccgtgac ctacccgacg cgcaccgcgt ctttgcactg atcgcccacg tttttgcgag
     4381 gagcgcagcg acgaagcacc cttcgtcgtc ctggctggat tactttgcgg agccggccat
     4441 ctggccggcg acttcgggcc gggccggttg gctcgcaatg acgcgctgct gtccagtcgt
     4501 tgcgagcagc ccgaagggcg acgaagcaac gcaaaatctt ggcggcggca actgacttgc
     4561 ttcgtggagc cggccatcgg gccagccact tcgggcccga cccgttggct cgcaacgacg
     4621 cgctgctagc tcaacatccc aagcgcgtgc aggtaggtct cgagaatggc ctcctgctcc
     4681 ttgcgttcgt tgaggtcctg cttgcgcaaa cgcacgacag tgcgcaaggc cttggtgtcg
     4741 aagccgttgg ctttggcttc gccatagaca tcgcggatgt cgtcggcgat cgccttcttc
     4801 tcctcctcca ggcgctcgac gcgctcgacg aaagccttga gctggtcctt ggcaaagcga
     4861 tgggcgggtt gatcgtcctt gacggcggcg gcggtcgaca tcgggctctc ctcgcgatga
     4921 cggtgccgca agctttcgaa agcaggcagg cagaggtcaa gcgcgggcgc gctcatccac
     4981 agcactgcac aggccgtcgt gcctcctctg ccgcgcgcag agcaaacaca aagcgatcta
     5041 gtgtttttgg cttgcttttt cgaaggccgc cttttgcgcc gcggacgctt ccttctggtg
     5101 cttggcgcgc cattcttcgt acggcatgcc gtagacgagt tcgcggctct cgtccttcgt
     5161 catcggcaag cctctctcgt cggcggcatc cttcatccag ttcgacaggc agttgcggca
     5221 gaagccggcc agattcatga gatcgatgtt ctgcacgtcg gtacgcgcgc gcaggtgctc
     5281 gaccagccgg cggaaaacgg cagcttcaag ttccatgcgg cttttctcgt cggcggccat
     5341 gatctcctcc ctcggtgcgg caatcgctgc tcgtcgaaac gattgccgct cctcgcttgc
     5401 cagcgaccat gatcttgcgg aaaaccagcc tccacttttc cggaccatgc gctaggtatg
     5461 gaaacataga gacccggctg gcgccattcc atacggcgct tgcggatcgt gatggacggg
     5521 atggatagaa ccgcgcgcgc cttcctcgaa tcgttgtttc gcagcgcagt cgctgccgcc
     5581 cacccggcgg ccgtgctgcc tgcgaacctg cccgagccgc cggcgcgcgg gcggctggtc
     5641 attcttgccg ccgggaaggc ggcaggcgcg atgaccgaag tcgcggaaca gcgctatctg
     5701 gcgctgctgc cgcggcaacg gctcgccggg ctcgcggtca cccgccacgg ctatgggcgg
     5761 ccgacgcaac ttgttccgct catcgaagcc ggccacccgg taccggacgc cgccggcatc
     5821 tctacaacca gacgggtgct cgcgctcgcc gatgcggtcg atgccgagga tctggtcctg
     5881 gtgctccttt ccggcggcgc ctcggcgaac tggatcgcgc cggttggcgg gctgaccctc
     5941 gcggagaagc aggcggtcac gcgggcgctg ctcaagagcg gcgccgcgat cggagagatg
     6001 aataccgtgc gcaagcattt gtcgcgtatc aagggcggcc gcctcgccgc gcgcgccttt
     6061 ccggccgaag tcacgacgct cgcaatctcc gacgtgcccg gcgacgaccc ggcggtcatc
     6121 ggctcgggtc cgacggtacc cgatccgacg acacttgccg atgcgcgcgc cgtcgtcgcc
     6181 cgttatcgcc tcgatctgcc cgaacgggtg acgcacgccc tcagcgatgc cgcgaacgag
     6241 acaccgaagc cgggcgacaa gatcttcgag cgatcgagct accgcatcgt agcgcggccg
     6301 gctgacagct tgcacgcggc cgccgagcgc gccagcgccg ccggctatga aaccgtcatg
     6361 ctcggcgacc gcctgcaggg ggaagcgcgc aaggtcgccg cagagcacgc aaagctggcg
     6421 cgcgcattga gccgggaggg ccgtagggcc gtcgtgctct ccggcggcga gcttaccgtg
     6481 accctgcgcg ggaagggccg cggcggcccg aaccaggaat atgccctggc gcttgcgatc
     6541 cacctcgatg gcgcggatgg catagccgcg ctcgccgccg ataccgacgg aaccgatggc
     6601 ggcggcggcc gcgccgacga ccccgccggc gcgttcgtcg atgcgaccgc cctggcgcgc
     6661 gcccgcgccg ctggcctcga tcccgccgcg tttctcgctg acaacgattc cacggggttt
     6721 ttcaacgcca tcggcgattt gttcacgacc ggtccgacat tcaccaacgt gaccgacttc
     6781 cgtgccattg tcgttgacgg ccagtgaatt cgttcccgga ccgtgaaacc agccatgagg
     6841 caggcgagtt ttccaagtct ggcggcgagc gccctgatgc taagcgtggt cacgatgatc
     6901 gggcttgcgg tctcggccgg cgcggcggcg gccgacttcc ggctttgcaa caacaccgga
     6961 agccgcgtcg gcgtcgcggt cggctacaag gacgccgacg gctggaccac cgaaggctgg
     7021 tggaacctgc cttcccgcag ctgcgagacc gtgctcaagg gtaaccttgt cgcgcgcttc
     7081 tactatatct acgccatcga ctacgaccgc ggcggtgaat ggatgggaac ggccgtcatg
     7141 tgcacccgcg acaaggagtt caccatccgc ggcattggcg attgccttgc ccgcggctac
     7201 gaccgcaccg gcttctttga agtggatacc ggcgagcagc gggcctggac cgtccagctc
     7261 acggaatcga gcgagcagac cccgcagcac cccctgcgcc ccggtaatcc gctcgctcca
     7321 ccgccggccg gcgtgcgcgc gcccggcgcc aagggcgcgc cgctcgcgcc cggaagccag
     7381 ggcaaatgag gcggcggcgc cgcaccaagg tggtggcgac cctcgggccg gcttcgtcgg
     7441 gccgcatcat catcgcccgc ctgttcgagg cgggcgccga cgtgttccgc atcaacatga
     7501 gtcacaccac gcacgagaag atgcgtgagc tggtgagcac gatccgcgcc gtcgaggcgg
     7561 agtgcaaccg gcctatcggc atcctcgtcg atctgcaggg gccgaagctc aggctcggca
     7621 gcttcaggaa cgactgggcc gagatcgaca acggccagga tttcatcctc gactccgatc
     7681 cggcgccggg cgacgccacg cgcgtccatc tgccgcatcc ggaaatcttc gccgcgatca
     7741 aggtcggcga cacgattctc atcgacgatg gcaagctgcg cctcgtcgtc gccgagacga
     7801 gcccgcagcg cgtcgtcgcg cgcgtcgagg tcggcggcaa ggtgtcgaac cgcaagggag
     7861 tgagcctgcc gcacacggtg gtaccgctgg cagcgctggc gccgaaggac ttggccgatc
     7921 ttgaagccgc gctcgatgcc ggcatcgatt gggtggcgct gtcgttcatc cagcgtccgg
     7981 aagacatcgc cgaggcgaag aagatcacgc gcggacgcgc ggcggtaatg gccaagatcg
     8041 agaagccgca ggccgtaacg cggctgggcg acatcctcga cctcgccgac gcgctgatgg
     8101 tggcgcgcgg cgacctcggc gtcgagatgc cgctggagaa ggtccccggc gtgcagaagg
     8161 agatgacgcg cgcctgccgc cgcgcgggca agccggtcgt ggtcgcgacg caaatgctgg
     8221 agtcgatgat caccgcgccg gtgccgacgc gcgccgaggt ttccgacgtc gcgactgcca
     8281 tcttcgacgg cgccgatgcg gtgatgctct cggcggaatc cgcctccggc cagtacccgg
     8341 tcgaagcggt ggcgacgatg aaccgcatcg ccgaggaagt ggagagcgag ccgatctacc
     8401 tgtcgtcgat ccacgtcctg cacaccgagc ccgagcgcac tggcgccgat gccatcgccg
     8461 cggcggcgcg gcaggtggcc gagacgctcg atctctctgc catcgtctgc tggaccagtt
     8521 ccggttcgac cggcctgcgc ctctcacgtg agcgcccgca gccgccgatc gtcgccattt
     8581 cgccgatcgt cgccgcggga cggaaactgt caatcgcctg gggcatccac tgcgtgatcg
     8641 ccgaggacgc acgcgatcag gacgacatgg tggagcgcgc ttgccggatc gcgtgccgag
     8701 aaggttttgc gtcggccggc cagcgcgtca tcgtcgtcgc cggcgtgccg ttcggcacgc
     8761 ccggaacgac caacatgatc cgcgtcgcct tcatcgggcc ggacaacgaa gcagccgcgt
     8821 aagtcttgcc aaggtcatag tcgtgacgcg tcacgcacgg ctgatcagtt cctcaaccgc
     8881 ggcgacgatc cggtcggccg cggcgtggtg cagcaaatgg ccaaagccgg gcagcatctc
     8941 gagcctggcg ctcggcgccg cggtggcgag ccgcatcgcg tggtgctgcg ctgggaccac
     9001 cgggtcgcaa tcgccagtaa tgacgatggt cggtgtggcg agcgtgccgt agcgcccggc
     9061 ttgccgcttg aggaaagcct tgaggcgcgc gatgtcggcc gaattcgcaa ggagcgtctt
     9121 aggccgcagc agcaggcgcg ccgccgtgcg cttcatgtag ccgggcggcg acggttgcgg
     9181 ccgaaacgcg ccgcgaaaac ccggtccgat cagcagggcg ccaagcggca gcgtcagcgt
     9241 gtgggcgaac aaccatccgg caacggggat cgaaaagacc gaattgaacc acgtcttcgg
     9301 cccaagccac ggatgagtcg gcggcgcgat agcgacaagc ccggcaaccc gttgcggata
     9361 gtccagcgcg aatgtcagcg aaagcagccc gccccaggaa tggccgacca ctatggcgcg
     9421 gcccacctcg agccgatcga gcaccgcgtt cagcatcgcc gcctgatagg tgggtgagct
     9481 tccctcgccg cctctgcgct cgctccagcc gaggccgggc cggtcgagga gtatgacgcg
     9541 gtagtgggcg gcgaggcgct cgccaagcgc aagacgcatg tcctcgaggt tgcagccggc
     9601 gccatgcagc agcacgattg ccggcgcatc cgctgcgccg gcgtgctcgc ctatttcgac
     9661 gacgtgctgg cgcaagccgt tgatctcgat aaagcgcccg cgcggcgggt gcgcccgctc
     9721 gatcagccgg acgccaatga aggtgacggc ggcgccgacg ccaagcagga cagcgacaac
     9781 ggcgagcgtg tgcattcaag tcgctccccg gccgggccga gatcgggttc agagcaccgg
     9841 ctttccgttc agccagcgcg ctccgcgcgc gtagagggcg tcgagttccg ccccctcgat
     9901 gccgggcatg tcgggcttca cctggtagcc gaccctggtt tgcagatagg cgagatggcg
     9961 gtagccttcc gggaagcgtc tgagcagatc ctgatcgagg gtgagttcgg ccgacggatc
    10021 gaccggatcg atccggtcct tctcgtagat cggttggcgc agtaccagcc cccagcggcc
    10081 atcgcgtctt tcgaagaaat cgtagaaccg gccggtgcag acgacgtcag acaccacgcc
    10141 ctccaccggc gcacgctgcg agattgtcat cttcgtctgc gcgatggcgc ggtcgccggc
    10201 aacgccgatc gcgctgccgc cgaggaaatg caaaatgcgc acgccccgcg cccaaccttc
    10261 gtcattggcc ttgatgaagt cctcgaaact tccctggaac caggtcgcca tcatgcggcc
    10321 gtcggcgtgc cagaccgtgc ggaagcggtc ccacagccgc gcatcgcgcc acagcaccca
    10381 gttttccacc agctcgcgga tcacggcttt gtcggcggca atgtcggcca tgacgtgttc
    10441 tatccggttg cggcgtcacc gcaagcgacg cgaaacactc catgtccgta acgcgtcatg
    10501 agattgcttc gccgctgacg ctcatcgccg cgacgacagc cgcgagggtg acacgcaagg
    10561 cccgcatcag atcgcgcgac cctcgacctt ctcagtcagc gtcttcacga cttcgccgac
    10621 gtgttccaga tggggatcaa tggcaagcgc gcggcgatag gcttcgagcg cgtgcttgtc
    10681 gtcgccgatt tcctgcagga tggcgccgag gccggaaagc gcgccgaaat ggcgcggctc
    10741 gcgcgccaac acctcgcgga tgtcggccag cgagtgggaa tagtctttct gcaggtaata
    10801 cactgtggcg cgccggttcc agccttcggc gtagtcgggc cgaagctcga cgacggcgtc
    10861 gaggagcttg atagcgaggc cgtagtcctt tccgtccgcc gccgccttcg cccggcccat
    10921 gagcaagtta caggtgtcgc tgccggagac catccacagc gcccagatgc ggtcctcgag
    10981 cgccttggcg ctggcttcat ccggcgcgat cttgagcgcc tcgaacaacg tatcgaggtt
    11041 ataggtgcgc tcgccgcgct cgggacgctg cgcgtcgccc cgcggctttg cccagtcggg
    11101 agcggccggc gcatcgggct tgacctgcgt ggctgccgga gtcgcggcga cgagcggtgc
    11161 cgccaggatg gcggcaacgg cgagtgagga gaatcgcgag cccatactgg gagtctatgc
    11221 acgcgcggga gcgcggcaag cccgaaaaat gctcacagac gcgtgaactt tgcggccgaa
    11281 atgggcagca ccgcaggatg gtcagaatgg ttcaggcgca gcacggcaca gccccccgcc
    11341 caaccccgcg tacgatcagg caagcccggc ttccgctgcg ctcagcccac ggcaagagga
    11401 tcagccttgg cgggccttga agcgccgatg cgtcttgttg atgacgtaga cgcgtccctt
    11461 gcgccgcacg atgcgattgt cgcgatggcg gccgcggagc gacttcaatg agttacggac
    11521 tttcataggc aacattcccg ctgtcagcgg ttgcttaagc gagacgctgc cggcttgtca
    11581 acgacggcgc cgctacgcgg aagcgacgcg tgccccggtc tgcgcagcgg gacggttgcc
    11641 cggctggggc tcgcccgcgg aaaatccggt gaggatatcg accgccttgt tccaggcccg
    11701 cagcacgtgg ccgaatggac gcggcatgcc gtg
//
LOCUS       DATMQB010000302         2099 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4449504, whole genome shotgun sequence.
ACCESSION   DATMQB010000302 DATMQB010000000
VERSION     DATMQB010000302.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2099)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2099)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2099
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4449504"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..130
                     /locus_tag="VNY79_08760"
     CDS             <1..130
                     /locus_tag="VNY79_08760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018183042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Bax inhibitor-1 family protein"
                     /protein_id="HWX72577.1"
                     /translation="EMYSPMDDGTVAGRKAVMGALRLYLDFINLFLMLLRLFGDRR"
     gene            200..727
                     /locus_tag="VNY79_08765"
     CDS             200..727
                     /locus_tag="VNY79_08765"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011470684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HWX72578.1"
                     /translation="MSSADNIRPAGPGDVAAITRIYDEAVASGTATFEIEPPPEAEMA
                     RRLDALLAKNFPYLVAEWAGVVAGYAYVAPYHARPAYRWSVEDSVYVAPEFQRRGWGR
                     LLLARLIDGAEARGFRQMIAVVGDSANAASIALHAAAGFRRIGAVQSVGFKHGRWLDT
                     VLMQRSLGHGDSSVP"
     gene            complement(731..1096)
                     /locus_tag="VNY79_08770"
     CDS             complement(731..1096)
                     /locus_tag="VNY79_08770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2794 domain-containing protein"
                     /protein_id="HWX72579.1"
                     /translation="MEFGDTEPSALRGGEVRAPAPAGEVTFSRRELDRILSLYGRKVA
                     AGEWCDYAIDFLKDRAVFSVFRHASEFPIYRIEKCPRIARRQGAYSVVSATGHILRRG
                     QELDRVLGALDCSLRVVAG"
     gene            complement(1551..>2099)
                     /locus_tag="VNY79_08775"
     CDS             complement(1551..>2099)
                     /locus_tag="VNY79_08775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1223 domain-containing protein"
                     /protein_id="HWX72580.1"
                     /translation="GWKDTLASAGHSARQRAYARMRGDRQVYTPQIVVNGATHVLGSD
                     RAAIEHAVVQTDRNTAVMSLPVLLSVSDGEVNVKVQPGDNKRVGGEVWLCPVARAVQV
                     AIGRGENGGRTVTYHNVVRRWLKLGDFAGAVASWSIPISEIETGGIDGAAVIVQEGTR
                     EKPGIVLGSAFAPIGRQATVGK"
BASE COUNT          319 a          710 c          695 g          375 t
ORIGIN      
        1 ggagatgtac agcccgatgg acgacggcac cgtcgccggc cgcaaggcgg tcatgggcgc
       61 gctgcggctc tatctcgact tcatcaacct gttcctgatg ctgctgcggc tgttcggcga
      121 ccgccgctga gcgaagcagg cttttcttca acgccccggg ttcatcctgg ggcgttttgt
      181 tttgcggcgc gcatgaacga tgagcagcgc tgataatatc cgccccgccg gtccgggcga
      241 tgtcgcagcc atcacccgca tctacgacga ggccgtcgcc agcggcacag cgacgtttga
      301 gatcgaaccg ccgccggagg ccgaaatggc gcggcgcctg gacgcgctgc tggcgaagaa
      361 ttttccttat ctcgtcgccg aatgggccgg agtcgtcgcc ggctacgcct atgtggcgcc
      421 ctaccacgcc cggccggcgt accggtggag cgtcgaggac tcggtctatg tcgcgccgga
      481 atttcagcgc cggggatggg gccggctcct cctggcgcgg ctgatcgacg gcgccgaggc
      541 gcgcggtttc cgccagatga tcgcggtcgt cggcgactcc gcgaacgccg catcgatcgc
      601 gttgcacgcc gctgccggtt tccgccgcat cggcgcggtg caatcggtcg gcttcaagca
      661 cgggcgctgg ctcgacaccg tgctgatgca gcgctcgctc ggccacggcg attcgtcggt
      721 gccgtagctc tcagcctgca accacccgca gcgagcagtc gagcgcgccg agcacgcggt
      781 cgagttcttg cccgcggcgc agaatgtgac cggtcgcgga gaccacgctg taggcgccct
      841 ggcggcgggc gatgcgcggg catttctcga tgcggtaaat cgggaattcg ctggcgtgac
      901 ggaaaacgga aaacaccgca cggtccttga ggaagtcgat cgcgtagtcg caccattcgc
      961 cggcggcgac cttgcggccg tagagactga gaatgcggtc gagctcgcgc cggctgaagg
     1021 taacttcgcc tgcgggggcg ggcgcgcgaa cctcgccccc gcgcaacgcg cttggttcag
     1081 tatcgccgaa ttccatgcgg cgcctccgtc gtcgtcgcgt catgatcgcg ccggacgggc
     1141 gcggcggcaa gagccttgct cggcccagga ccacggccga atttgtgaga tttcgcgcct
     1201 caaccgccag ggtgcggcat ttttgaccgg cggaatcacg gattcgttaa gcgattcaca
     1261 atgcagcccc atttcagcca agcacgcgcc aagctggatt gcgaagtaat ggatcgttgc
     1321 ctcagggccc gatccggatc gcgctccgga ttcctcagcc ccccagcccc ccggggtgtg
     1381 gacggatcgg gccagagttt ccgcgtacgg ttcaatccaa cctttaggcc ggcgaagcgc
     1441 cggccttttt tgttgggcgt gcgtgcgtca gaagtggatg tcggattgcg cggtcggata
     1501 ccggaagcgg ggttatcgag gacagcggcc gagtccgccg ctgatacccg tcatttgccg
     1561 accgtcgcct gtcgtccgat cggagcgaac gcgctgccga ggacgatgcc cggtttttcg
     1621 cgcgttcctt cctgcacgat caccgcggcg ccatcgatgc cgccggtttc gatctcggag
     1681 atcggaatgc tccagcttgc gaccgcgccg gcgaaatcgc cgagcttgag ccagcgccgc
     1741 accacgttgt gataggtcac cgtgcgcccg ccattctcgc cgcggccgat cgccacctgc
     1801 acggccctgg ccaccggaca gagccagact tcgccgccga cgcgcttgtt gtcgcccggc
     1861 tgcaccttca cattcacctc gccgtcgctc accgacaaca gtacgggcag cgacatgacc
     1921 gcggtattgc ggtcggtctg caccaccgcg tgctcgatcg cggcgcggtc gctgccgagc
     1981 acgtgggttg cgccgttgac cacgatctgc ggcgtgtaca cctgccggtc gccgcgcatg
     2041 cgcgcatagg cgcgctgccg cgccgaatgc ccggcgctgg cgagcgtgtc tttccaccc
//
LOCUS       DATMQB010000303        10571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_114867, whole genome shotgun sequence.
ACCESSION   DATMQB010000303 DATMQB010000000
VERSION     DATMQB010000303.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10571
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_114867"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..935)
                     /locus_tag="VNY79_08780"
     CDS             complement(<1..935)
                     /locus_tag="VNY79_08780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0019867 - outer membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="POTRA domain-containing protein"
                     /protein_id="HWX72581.1"
                     /translation="MGMCVRVRRGLVAIGLLFSVAFFGLAGVVVVAAQPESGVTATAI
                     VVQGNRRVEAETVRSYFRVVPGERLDAAKIDAALKALYASGLFEDVRISQSGGRLIVT
                     VVEAPVIDRLAFEGNSRIKDEQLQQEIQSKARGTLSRATVQADVQRIIEVYHRNGRFD
                     VTVVPKIIQRPNNRVDLVFEVKEGEKTGIRSIIFVGNHAYSDYRLRDVIKTSESNWLS
                     FLQTTDVYDADRIEADRDLIRRYYLSHGYADVQVVSATGEYDPSRKGFIITFTIEEGS
                     LYHFGVVDVQSNIRAVDPQTLRSVLRTRAGEIYNG"
     gene            complement(1091..2242)
                     /gene="rseP"
                     /locus_tag="VNY79_08785"
     CDS             complement(1091..2242)
                     /gene="rseP"
                     /locus_tag="VNY79_08785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HWX72582.1"
                     /translation="MGSNIFSHLHALGGGVVGYIIPFLFVLSLVVFFHELGHFLVGRW
                     CGVRILVFSIGFGPEIIGFNDRYGTRWKISAIPLGGFVKFFGDDNVASVSSSARLAGM
                     DEAARAECFVFQPVRERAAIVVAGPLANFILAIAIFAGIFMLYGKQTMSARVDAVQPD
                     SAAATAGFQTGDLVLAIDGHSVESFADMQRIVSASADETLAVTVERNGATLTLKAVPA
                     LKEVKDTFGNVHRIGILGISRSMAAADMKLQPVPPPRAVWMGIEETWFVVERTLSYIG
                     GVVVGREAADQLGGPIRIAQMSGQVATMGFVALLHLAAVLSVSIGLLNLFPIPLLDGG
                     HLLFYGIEAMRGRPLSERAQEVGFRIGLAIVLMLMIFATFNDIIHLTTS"
     gene            complement(2290..3510)
                     /gene="dxr"
                     /locus_tag="VNY79_08790"
     CDS             complement(2290..3510)
                     /gene="dxr"
                     /locus_tag="VNY79_08790"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0030604 - 1-deoxy-D-xylulose-5-phosphate
                     reductoisomerase activity [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HWX72583.1"
                     /translation="MQTQPLARAELAPVPRAISLLGATGSIGSSTIDLLRQDPARYRV
                     EAVTAYRNAAALALLARELGARFAVVADVDAYGELKAELSGSGIEAGAGADAVVEAAE
                     RPADWVMAAITGATSLKPTLAAAKRGATVALANKECLVCAGALFMRQAAAAGAKVLPV
                     DSEHNAIFQALGAGRREDVRRITLTASGGPFRTWPLEAMRKVTVEQALKHPTWSMGPK
                     VTIDSATLMNKGLELIEAHHLFALGPEALDVVVHPQSVVHGLVEFRDGSVVAQLGSPD
                     MRIPIAHCLAWPVRMGTPAPRLDLARIATLTFEEPDLARFPALALARRALAAGGAFPT
                     ILNAANEIAVREFVGRRLGFGGIPALVEATLDAAAKDGMVNEPQSIEDALDIDHNARR
                     IAAHLLPEIAAMAS"
     gene            complement(3518..4411)
                     /locus_tag="VNY79_08795"
     CDS             complement(3518..4411)
                     /locus_tag="VNY79_08795"
                     /EC_number="2.7.7.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008837946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HWX72584.1"
                     /translation="MTTQDHGNGRGRGAGPSGGSGARNLTLRTLSAAVLAPIVLVLTY
                     ADGWLFLALCAVAAGGILWEWIHLIADRGGPRVLAVGLAALLAAFVLTGAGQPGAAVS
                     AIAAGAVLAGALGARSLGAAVRNGGLWAAGGVVYAGIAFLSPALLRRDPQWGFIGLLF
                     LFATVWATDIFAFLCGRAVGGPLLLPSVSPNKTWAGAIGGLAGGIAAAVAVAYASGVR
                     FAAAAGLMGLLLSILAQAGDLFESAVKRRFGAKDASRLIPGHGGLMDRLDGFLVAAFA
                     ALLIGIARQGMDAPARGFLLW"
     gene            complement(4408..5187)
                     /locus_tag="VNY79_08800"
     CDS             complement(4408..5187)
                     /locus_tag="VNY79_08800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016765 - transferase activity,
                     transferring alkyl or aryl (other than methyl) groups
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HWX72585.1"
                     /translation="MSDPARSRSEAAPPSTVAGDGFAAPRHVAIIMDGNGRWAAAHGL
                     PRVEGHRRGVEALRRTVRAAGDLGIAVLTIFSFSSENWSRPLSEIRDLMGLLRRFIRN
                     DLADLHKNNVRVRIIGERKGLERDVLLLLQEAEDLTRGNDRLTLVVAFNYGARQEIAS
                     AARRLAIEVAQGRLSADDISPELFAGYFHAPDIPDPDVIIRTSGEQRLSNFLLWQVAY
                     SELVFVPINWPDFDRAALEGAIAEYRRRERRFGGLVTQTGS"
     gene            complement(5184..5747)
                     /gene="frr"
                     /locus_tag="VNY79_08805"
     CDS             complement(5184..5747)
                     /gene="frr"
                     /locus_tag="VNY79_08805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008135 - translation factor activity, RNA
                     binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HWX72586.1"
                     /translation="MAATTFDLNDLKRRMQGAIQSLKHELSGLRTGRASPALLDHVQV
                     EAYGNHMPLNQLATISVPEPRLLNVQVWDRSMIHPIEKAISAANLGLTPSTDGQVIKL
                     RIPELNEERRREIVKVAHKYAEAARVAVRHVRRDGLDLLKKLEKEHKISEDEQERQAG
                     EVQKATDASIGEVEKLLAGKEKEIMTV"
     gene            complement(5813..6526)
                     /gene="pyrH"
                     /locus_tag="VNY79_08810"
     CDS             complement(5813..6526)
                     /gene="pyrH"
                     /locus_tag="VNY79_08810"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0033862 - UMP kinase activity [Evidence
                     IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HWX72587.1"
                     /translation="MATPKYRRVIVKLSGEALSGPEKFGINQPTIDRFAADLVASHAL
                     GIGLGIVVGGGNILRGAQISEDGLSRPTADAMGMLATVMNALVLEAAIERAGVGARTM
                     SALAMPQVCETYERQRALRHLEDDRVIVFAGGTGNPYFTTDTTAILRAAEMGCDAVLK
                     ATDVDGVYTADPKRDPAAKRYERLDHQEALDRNLKIMDATAFALARENRMPIIVFSIR
                     EHGAIETVLRGKGHFTTVG"
     gene            complement(6638..7561)
                     /gene="tsf"
                     /locus_tag="VNY79_08815"
     CDS             complement(6638..7561)
                     /gene="tsf"
                     /locus_tag="VNY79_08815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008131343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation elongation factor Ts"
                     /protein_id="HWX72588.1"
                     /translation="MANITASMVKELRDKTGAGMMDCKAALGESGGDLETAVDWLRKK
                     GLAKAAKKAGRIAADGLIGVALAPTSGIVVEVNSETDFVARNDLFQGLVKMIADVALD
                     VGPDVAKILAARLGDLPVSEAIADTIAKVGENMTLRRAAGLSVSKGVVASYVHNSVAD
                     GLGKIGVIVALESAGTGDELKAFGRMLAMHVASSNPQAVDVSGLDAATIERERNVLAE
                     KFKAQGKPAAVIDKIVESGLKTFYKEVCLLDQPFIFDDKKSVAQALKESEGRAGAPIV
                     VRGFVRYALGEGIDRPGGDFGGEVAALAGAH"
     gene            complement(7725..8729)
                     /locus_tag="VNY79_08820"
     CDS             complement(7725..8729)
                     /locus_tag="VNY79_08820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HWX72589.1"
                     /translation="MALPDFSMRQLLEAGVHFGHQSHRWNPKMAEYIFGTRNNIHIID
                     LTQSVPMLHRALQAISDTVAQGGRILFVGTKRQAQDAIADAAKKSAQYYVNSRWLGGT
                     LTNWKTVSNSIRRLRTLDEMLASNEAQGYTKKERLTLQRERDKLNRALGGIKDMGGLP
                     DLVFVIDTNKEDIAIKEARRLNVPVAAVVDTNCDPDGITYVVPGNDDASRAITLYCDL
                     VAKAVIDGISRAQGERLDIGALAEPEVVEELPPETDRLGFQALSGPRGTADDLKKFPG
                     VSPTVEKKLNDLGIFHAWQIAELSPTAAHNIGEEVGLPGRIEAWIARAKEQVATESQE
                     "
     gene            complement(8934..>10571)
                     /locus_tag="VNY79_08825"
     CDS             complement(8934..>10571)
                     /locus_tag="VNY79_08825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HWX72590.1"
                     /translation="ASVAIPAGTKVGVVGRNGVGKSTLFRLILGDLVPLGGEILLPKN
                     ATIGSVDQEHPATPVSLLDTILAADARREQLNAELETAEPEQLADIYQHLNAIDADRA
                     PARAAEILSGLGFANADLDRPLAEFSGGWRTRVALAAALFAQPDLLLLDEPTNYLDLE
                     GALWLEARLKKYPHTTLIISHDRELLNNSVEAILHLNAAKLELYTGGYDDFETRRAEK
                     SRLQAATKAKQDAERAHLQRFIDRFRAKASKATQAQSRIKRLAKLEPIAEVVEARVAP
                     FVLPSPTRPLAPPLLQLEGAAVGYDGAPVLRNLNLRLDVDDRIGLLGVNGAGKTTFAK
                     MVAGALPLLAGQMKREQRIRVGWFHQHQIEALDPADTPLDILRRERPDDDESSRRSRL
                     AQFGLSFDKQETTVANLSGGERARLLLNLVAMAAPHLLILDEPTNHLDIDSRRALLDA
                     LNDYEGAVILITHDRSLIELVADRLWLTADGRIKPFAGDMDDYARFILERAKLAVSLS
                     PEVDLAPSGPIPGDQDSTAAARVAARKAAKKRRRRGL"
BASE COUNT         1835 a         3522 c         3388 g         1826 t
ORIGIN      
        1 tcgccgttgt agatttcgcc tgctcgcgtc cgcaggacgg accgcagcgt ctgcgggtcg
       61 acggcgcgga tattggactg cacgtcgaca acgccgaaat gatagagcga cccttcctcg
      121 atggtgaagg tgatgatgaa acccttcctg gaagggtcgt attcgccggt cgcggagacg
      181 acctgcacgt cggcatagcc gtggctcaaa tagtagcggc ggatgaggtc gcggtcggct
      241 tcgatgcggt cggcgtcgta gacatcggtg gtctgcagga agctgagcca gttcgattca
      301 gaggtcttga tcacatccct gagccggtag tcggaatagg cgtggttgcc cacgaagatg
      361 atggacctga tcccggtctt ctcgccttcc ttgacctcaa agaccagatc gacgcgattg
      421 ttcggccgct ggatgatctt cggcaccacc gtgacgtcga aacgcccgtt gcgatgatag
      481 acctcgatga tgcgctggac gtccgcctgc accgtggcgc gcgacagggt gccgcgtgcc
      541 ttggattgaa tctcctgctg cagctgctcg tccttgatgc gcgagttgcc ctcgaaggcg
      601 agccggtcga tgaccggcgc ttccaccacg gtgacgatga ggcggccgcc ggattgggag
      661 atgcggacgt cttcgaacag gcctgaggca tagagcgcct tgagcgcagc gtcgatcttg
      721 gccgcgtcaa gccgctcgcc aggcacgacc cggaagtagg agcgtaccgt ctcggcttcg
      781 acgcggcgat tgccttgcac gacgatggcg gtcgcggtca cgcccgattc cggctgcgcc
      841 gcaacgacga cgacgccagc gaggccaaag aaagccacgc tgaagagcaa gccgatcgcg
      901 acgagccccc gccttacccg cacacacatg cccatgcgca aagcgccctt atcccctcgt
      961 gccgtccagg gtagtgcgat gcttggagct ttatgcgcta aggctcggcc cggcgaaagc
     1021 tcgttcccgc atccataccc cggattgccc ttatccccca ccctttaccc acaccccagc
     1081 cgcggtcgct ctaagacgtc gtcaaatgga taatgtcatt aaacgtcgca aatatcatca
     1141 acatcagcac gatcgcgaga ccgatgcgga aaccgacctc ctgggcccgc tcggagagcg
     1201 gccggccgcg catggcttca attccgtaga acaaaaggtg accgccatcg aggagcggaa
     1261 tgggaaagag attgagcagc ccgatcgaga ccgaaagcac cgcggccagg tgaaggagcg
     1321 cgacgaagcc catcgtcgcc acctgtccgg acatctgcgc gatgcggatc gggccgccga
     1381 gctggtccgc ggcctcgcgc ccgacaacaa cgccgccgat gtagctcagc gtccgctcga
     1441 ccacgaacca cgtttcctcg atgcccatcc agacggcccg cggcggcggg accggttgca
     1501 gcttcatgtc cgcggccgcc atcgaccggc tgatgccgag aatgccgatg cgatggacgt
     1561 tgccgaaggt gtccttcact tccttgagcg ccgggacggc cttgagggta agcgtggcgc
     1621 cgttgcgttc cactgtgacg gcgagggtct cgtcggcgct ggcgctgacg atacgctgca
     1681 tatcggcaaa gctttcgacg gaatggccgt cgatggctaa gaccaaatcg ccagtctgaa
     1741 atcccgccgt cgcagcggcg ctgtcgggct gcactgcatc gacacgcgca ctcatcgtct
     1801 gcttgccgta gagcatgaaa atcccggcga aaatcgctat cgccaaaatg aaattcgcca
     1861 gcggcccggc gacgacaatg gccgcgcgct cgcgcacggg ctgaaacacg aagcattcgg
     1921 cgcgcgcggc ctcgtccatg ccggcgagac gcgcgctgct cgaaacgctc gcgacgttgt
     1981 catcgccgaa aaacttgacg aatccgccga gcgggatcgc ggaaatcttc cagcgcgtcc
     2041 cgtagcggtc gttgaagccg ataatttccg ggccgaatcc tatcgaaaac acgaggatgc
     2101 gcacgccgca ccagcgtcca accagaaagt gcccgagctc atggaagaag accacgaggc
     2161 tcagaacgaa caggaagggg atgatgtatc caacaacgcc accgccaagc gcatgcaaat
     2221 gcgagaaaat attggacccc atgatgctga atgccccgcc cagatgatgg tccccgcccg
     2281 gttccgacgt tacgatgcca ttgcggcaat ttcgggcaag aggtgagccg ctatccttct
     2341 cgcattatgg tcaatatcga gcgcgtcttc aatggattgc ggctcattga ccatgccatc
     2401 ttttgccgct gcatcgagcg tcgcctcgac gagcgcgggg atgccgccga aaccgagccg
     2461 gcggccgacg aactctcgca ccgcgatctc gttcgcggca ttgaggatgg tcgggaatgc
     2521 gccgccggct gccagggccc gccgcgccag cgccagcgcg ggaaagcggg cgagatcggg
     2581 ctcttcgaac gtcagcgtgg cgatccgggc gagatcgagc cgtggcgctg gcgtacccat
     2641 gcggaccggc caagccaggc agtgcgcgat cgggatgcgc atatcgggcg agccgagctg
     2701 agcgaccacg gaaccgtcgc ggaactcgac cagcccgtgg acgaccgatt gcggatggac
     2761 gacgacgtcg agcgcctccg gtccgagcgc gaacaggtgg tgcgcctcga tcagttcgag
     2821 gcctttgttc atcagcgtcg ccgagtcgat ggtgactttc ggccccatcg accaagtcgg
     2881 atgcttgaga gcctgctcga cagttacctt gcgcatcgct tcgagcggcc aggtgcgaaa
     2941 gggtccgccc gaggcggtca gcgtgatccg gcgcacatcc tcgcgccggc ccgcgcccag
     3001 cgcctggaag atggcattgt gctcggagtc gaccggcaag accttggcac cggccgcggc
     3061 cgcctgccgc atgaacagcg cgccggcgca gacgaggcat tccttgttgg caagcgcaac
     3121 ggtcgcgccg cgtttggcgg cggccagcgt cggcttgagg cttgtcgcgc ctgtgatcgc
     3181 ggccatgacc caatcggccg gtcgctccgc cgcctcgacg acggcgtcgg caccggcgcc
     3241 tgcttcgatg ccggagccgg aaagttcggc cttcaattcg ccgtaggcgt ccacatcggc
     3301 cacgacagca aagcgcgcgc caagctcgcg cgcgagcagc gccagcgcgg cggcattgcg
     3361 ataggccgtc accgcttcga cgcggtagcg ggccgggtcc tgccgcaaca ggtcgatcgt
     3421 gctcgacccg atcgagccgg tggcgccgag aagcgagatc gcccgcggaa caggcgcgag
     3481 ctccgcccgc gccaatggct gcgtctgcat catcggccta ccatagcagg aagccgcgcg
     3541 ccggggcatc cattccctgc cgcgcgatgc cgatgaggag ggcggcaaag gcagcgacca
     3601 ggaagccatc gagacgatcc attagacccc catggcccgg aatgagccgg cttgcgtcct
     3661 tggcgccgaa gcgccgcttg accgccgatt cgaacaggtc cccggcttgc gccaggatcg
     3721 aaagcaaaag ccccatgagg ccggccgccg ccgcgaagcg gacaccactc gcgtaggcga
     3781 ccgcgacggc agcggcaatc cccccggcaa gacccccgat cgcccccgcc caggtcttgt
     3841 tcgggctcac gctcggcaag agcagcggac cgcccacagc ccggccgcag aggaaggcga
     3901 aaatgtcagt cgcccaaaca gttgcgaaca ggaacagcag ccctatgaaa ccccattgcg
     3961 ggtcgcggcg caacagcgcc gggctcagga aagcaatccc ggcatagacc accccgccgg
     4021 ccgcccaaag gccgccgttg cgcacggccg cgccaagcga ccgggcgcct aaagcgccgg
     4081 cgagcaccgc cccggcagcg atcgccgaca ccgccgcgcc gggctggccc gcaccggtca
     4141 gcacgaatgc cgctagcagt gcggccaagc ccaccgcgag aacgcgcggc ccgccgcggt
     4201 cggcgatcag atgtatccac tcccacagga taccgccggc ggcgacggcg cagagggcca
     4261 gaaacagcca accgtcggca taggtgagaa cgagcacgat cggcgccagc acggcggcgg
     4321 agagcgtgcg cagcgtgaga ttgcgggcgc cgcttccgcc cgaagggccc gctccgcgcc
     4381 cgcgaccgtt gccatggtct tgcgtggtca cgatccggtc tgggtgacca atccgccaaa
     4441 ccgacgctcg cggcggcgat attcggcaat cgcgccttcg agcgcggcgc ggtcgaaatc
     4501 gggccaattg atcggaacga aaacgagttc gctgtaggcc acttgccaga gcaggaagtt
     4561 cgagagccgt tgctcgccac tggtgcggat gatcacgtcg ggatcgggaa tatcgggggc
     4621 gtggaaatag ccggcgaaca gctccggcga aatgtcgtcg gccgacagcc gcccttgcgc
     4681 cacttcgatc gccaagcggc gcgcggcact agcgatttcc tggcgtgccc cgtagttgaa
     4741 ggcgacgacg agcgtcaggc ggtcattgcc gcgcgtcaaa tcttccgcct cctgaagaag
     4801 caggaggaca tcgcgctcga ggcctttgcg ctcgccgatg atgcgtacgc gcacgttgtt
     4861 cttgtgcagg tcggcgagat cgttgcggat gaaacggcgc aacaggccca tcagatcgcg
     4921 gatctccgag agcggccgcg accagttctc cgagctgaac gaaaaaatcg tcagcacggc
     4981 gatgccgagg tcgccggcag cgcgcacggt acgccgcaag gcctcgacgc cgcgccggtg
     5041 cccttccacg cgcggcaggc catgcgccgc ggcccagcgc ccgttgccat ccatgatgat
     5101 ggcaacgtgc cggggcgcgg caaagccgtc gcctgccacc gtcgacggcg gcgccgcctc
     5161 gcttctcgat cgtgcagggt cgctcaaacc gtcatgatct ccttttcctt gccggcgagc
     5221 agcttctcga cctcgccgat actggcgtcg gtcgccttct gtacctcgcc ggcctggcgc
     5281 tcctgctcgt cctcgctgat cttgtgctcc ttctccagct tcttgagcag gtcgaggccg
     5341 tcgcggcgga catggcgcac cgccacgcgc gcagcctcgg cgtatttgtg tgcgaccttc
     5401 acgatttcgc gccgccgctc ttcattgagc tcgggaatcc gcagcttgat gacttgcccg
     5461 tcggtcgaag gggtcaagcc gagattggcg gcggaaatcg ccttctcgat cggatgaatc
     5521 atcgaccggt cccagacctg gacgttgagg agccgcggct cgggtacgct gatcgtcgcc
     5581 agctgattga gcggcatgtg gttgccatag gcctccacct gcacatggtc gagcagcgcc
     5641 ggcgaggcgc ggccggtgcg caacccggaa agctcgtgct tgagcgattg gatcgctccc
     5701 tgcatgcggc gcttgaggtc attgaggtcg aatgtggtcg ctgccatggc gtcctccgca
     5761 atcgccgttc cgggctttcc aggcgcccgc ctccacacgg tcatgccggc gcttagccga
     5821 cggtggtgaa gtgccccttg ccgcgcaaga ccgtttcgat ggcgccgtgt tcccggatcg
     5881 aaaagacgat gataggcatc cggttctccc gggcaagcgc gaacgccgtc gcatccatga
     5941 tcttcaggtt tcgatccagc gcctcctgat gatcgaggcg ttcgtagcgc ttcgccgccg
     6001 gatcccgctt gggatcagca gtatagacgc cgtcgacgtc ggtcgccttg aggacggcgt
     6061 cgcatcccat ctcggcggcg cgcaggatcg ccgtggtgtc ggtggtaaag tacggattgc
     6121 cggtcccgcc ggcaaagacg atgacgcggt cgtcctcgag gtgccgcagt gcccgctggc
     6181 gctcgtaggt ctcgcagacc tgcggcatgg cgagcgccga catggtgcgc gcgcccaccc
     6241 ccgcgcgctc gatggccgcc tcgaggacca gcgcattcat caccgtcgcc agcattccca
     6301 ttgcgtcggc cgtcggccgc gacaggccgt cttcggagat ctgcgctccg cgcagaatgt
     6361 tgccgccgcc gacgacgatg ccgagcccga tcccgagcgc gtgcgaggcg acaaggtcgg
     6421 cggcgaagcg gtcgatggtc ggctgattga tcccgaactt ttcaggaccg ctcaacgctt
     6481 cgccggagag cttgacgatc acccgtcggt atttcggcgt ggccatcgac gttgcttcgt
     6541 tgcttcggtc ctgccgccgc ctgcggtcac cggcggcgcg atttgagtac cgctgtcagt
     6601 acggcaacac gccacaaccg ttctgcgcga tcatgcgcta atgcgcgccg gcaagagcgg
     6661 cgacttcgcc gccgaaatcg cctccaggcc ggtcgatgcc ttccccgagc gcatagcgca
     6721 cgaaaccgcg gaccacaatc ggagcccccg ccctgccctc gctctccttg agcgcctgcg
     6781 ccacgctctt cttgtcatcg aaaatgaacg gctgatcgag cagacagact tccttgtaga
     6841 aggtcttcaa tcccgattcg acgatcttgt cgatgactgc ggcgggcttg ccctgtgcct
     6901 tgaacttctc cgcaagcaca ttgcgctccc gctcgatcgt cgcggcatcg agccccgaga
     6961 cgtcgaccgc ctgcggattc gacgaagcga catgcatcgc cagcatgcgg ccgaaggcct
     7021 tgagttcgtc gcccgtgccg gcggattcga gcgcgacgat cacgccgatc ttgcccagcc
     7081 catcggcgac cgaattatgc acgtagctcg ccaccacgcc cttgctgacc gagaggccgg
     7141 cggcgcggcg cagcgtcatg ttctccccga ccttggcgat ggtgtcggcg atcgcctcgg
     7201 acacgggcag atcgcccagg cgcgcggcaa ggatttttgc cacgtccggg ccgacgtcga
     7261 gcgcgacgtc cgcgatcatc ttcaccaggc cctgaaacag atcgttgcgg gcgacgaagt
     7321 cggtttccga gttcacctcg accacgatgc cactcgttgg cgcaagcgcg acgccgatga
     7381 gcccgtcggc ggcgatccgt cccgccttct tggcggcctt cgccagcccc ttcttgcgca
     7441 gccaatcgac cgccgtttca aggtcgccgc cgctctcgcc gagcgccgcc ttgcaatcca
     7501 tcattccggc tccggtcttg tcgcggagct ccttcaccat gctcgcggtg atgttcgcca
     7561 taactgtcga tccttgttac ccaatgccgc cactgcgaga tgcgcagcgc ccaaagcgca
     7621 ccgcgccgaa gccgcccagc ccgtgatgcc agcccttgat cccagccctt gatctaagtg
     7681 cttccggatc gcttcgccgc tacgccactg gcgcgacgga gccatcactc ctggctttcg
     7741 gtcgccacct gttccttggc ccgggcaatc cacgcttcga tgcgtccggg aaggccgacc
     7801 tcctcgccga tattatgggc ggcggtcggc gagagttccg caatctgcca agcgtggaaa
     7861 ataccgaggt cgttgagctt cttctcgacc gtcggcgaca cgcccgggaa ttttttcagg
     7921 tcgtccgccg tgccgcgcgg cccggagagc gcctggaagc cgagccggtc ggtctccggc
     7981 ggcaattcct cgaccacctc cggctcggcc agcgcgccga tgtcgaggcg ctcgccctgg
     8041 gccctggaaa tgccgtcgat caccgccttg gcgacaagat cgcaatagag cgtgatggcg
     8101 cggctggcgt cgtcattgcc gggcacgacg taggtgatgc cgtccggatc acagttggtg
     8161 tcgaccacgg cggcgaccgg cacgttgagg cggcgcgctt ccttgatcgc gatatcttcc
     8221 ttgttggtgt cgatcacgaa cacaaggtcg ggaagcccgc ccatgtcctt gatgccgccg
     8281 agcgctcggt tgagcttgtc gcgctcgcgc tgcagcgtca gccgctcctt tttggtatag
     8341 ccctgcgctt cattcgaggc cagcatctcg tcgagcgtgc gcagccgcct gatcgagttc
     8401 gagaccgtct tccagttggt cagcgtgccg ccgagccagc gcgaattgac gtagtattgc
     8461 gccgacttct tggccgcgtc ggcgattgcg tcttgcgcct ggcgcttggt gccgacgaac
     8521 aggatgcgtc cgccttgcgc cacggtgtcg ctgatcgcct gcagcgcccg gtgcagcatc
     8581 ggcactgact gcgtcaggtc gatgatgtgg atgttgttgc gggtgccgaa gatgtactcc
     8641 gccatcttcg ggttccagcg gtgggactga tggccgaaat ggacgccagc ttccaagagc
     8701 tggcgcatgc tgaagtcggg cagcgccata gaagattctc cggttgatcc gccgcggacc
     8761 gaagagcctg cccctggcta tactcccggt tggggagaca ttcgcgagtg gcgggcaccg
     8821 gacggcccct tcgggccaag atccgcgtgt gaagttggtt gccttatata ggcacatccc
     8881 ccggccacgc aactttgaac gttggcgcct ctaccagcgg ccattgactg cgctcacagg
     8941 ccccggcgcc ggcgcttttt tgccgccttc ctggcggcaa cgcgcgccgc ggcggtgctg
     9001 tcttggtccc ctggtatcgg gcccgacggc gctaaatcga cctccggcga gagcgaaacc
     9061 gcaagcttcg cacgctccag aatgaagcgg gcatagtcgt ccatatcgcc ggcgaagggc
     9121 ttgatgcgac cgtccgcggt cagccacaac cggtcggcga cgagctcgat cagggagcgg
     9181 tcgtgggtaa tgaggatgac ggcgccctca tagtcattga gcgcatcgag gagcgcgcgg
     9241 cggctgtcga tatcgaggtg gttggttggc tcatcgagga tgagcagatg cggcgccgcc
     9301 atcgccacga ggttgagcaa cagccgggcg cgctcgccac cggatagatt tgcgacggtg
     9361 gtttcctgct tgtcgaacga gagcccgaac tgcgcgagcc gcgatcgcct tgaggattcg
     9421 tcgtcatccg gccgttcgcg ccgcagaatg tccaacggcg tatcggcggg atccagcgcc
     9481 tcgatttgat gctgatgaaa ccagccgaca cggatgcgct gctcgcgctt catctggcca
     9541 gccagcaacg gcagcgcacc ggccaccatc ttggcgaacg tcgttttgcc cgcgccgttg
     9601 acgccaagga gcccgatgcg gtcgtcgacg tcgagccgca gattgaggtt gcgcagtacc
     9661 ggagcgccgt cgtagccgac cgccgcccct tcaagctgga gcaaaggcgg cgccagcggc
     9721 cgcgtcggcg acggcagcac gaaaggcgcg acgcgcgcct cgaccacctc ggcgattggt
     9781 tcgagttttg cgaggcgctt gatgcgcgac tgcgcctgcg tcgccttgct ggccttggcc
     9841 ctgaaccggt cgatgaaccg ctgcaaatgg gcgcgctcgg catcctgctt ggctttggtc
     9901 gcggcttgca ggcgcgactt ctccgcgcgc cgggtttcga aatcatcgta accgcccgta
     9961 taaagttcga gcttggccgc gttcaagtgc aggatcgcct cgaccgaatt gttgagaagc
    10021 tcgcgatcgt ggctgatgat cagagtggtg tgcggatatt tcttgagccg cgcttccagc
    10081 cacaacgcgc cttcgaggtc gaggtagttc gtcggctcgt caagcaggag caaatcgggt
    10141 tgcgcgaaca gcgccgccgc cagtgccacc cgcgtgcgcc agccgccgga gaactccgcg
    10201 agcgggcggt cgagatcggc gttggcaaaa ccgagcccgc tgaggatttc ggccgcgcgt
    10261 gccggcgcac ggtccgcgtc gatcgcattc aggtgctggt agatatcggc aagctgttcg
    10321 ggctcggcgg tttccagctc ggcgttgagt tgctcgcgcc gcgcatcggc ggcgagaatc
    10381 gtgtccaaaa gcgagacggg cgtcgccggg tgttcctgat cgaccgatcc gatcgtggcg
    10441 tttttcggca gcaggatttc accgcccagc ggcacaaggt cgccgaggat cagccggaac
    10501 agggtcgatt tcccgacccc gttgcgtccc accacaccga ctttcgttcc cgccggtatg
    10561 gcgacactgg c
//
LOCUS       DATMQB010000304         7343 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1663379, whole genome shotgun sequence.
ACCESSION   DATMQB010000304 DATMQB010000000
VERSION     DATMQB010000304.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7343)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7343)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7343
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1663379"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1839
                     /locus_tag="VNY79_08830"
     CDS             <1..1839
                     /locus_tag="VNY79_08830"
                     /inference="COORDINATES: protein motif:HMM:NF024842.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HWX72591.1"
                     /translation="SIAGGLLPGLAMPGRAAAAAPQDQAGYYPPALTGLRGSHVGSFE
                     VAHSLRDGSVWSQSGKITDTGERYDLVVVGGGISGLSAAYFYRARRRGARILILDNHD
                     DFGGHAKRYEFQLGGRLALINGGTFQIDSPRPYSAVADGLLQELAIDPVALANKCADR
                     DFYRSLGLGRSVFFDRETFGADKLLVAGGEASWTQLLAQSPLSPQAQSDIARIEEAKI
                     DYLPGLSSAEKKSRLSKMSYRDFLLNVTKADPSAIAFYQARTHGEWGVGIDAVSALDV
                     WGFGFPGFQGLELAPGSAPGMGYTAAGYADGASYTFHFPDGNASIARLLVRSLVPESL
                     PGRSAEDVVSARLDYSRLDDAGSPARIRLGSTTIRVRNVGDPAASAEVEIAYMRAGEL
                     CAVRAGSCVLACYNMIIPYLCPELPEPQKEALRYAVKVPLIYASVALTNWTAFKALGI
                     SRVYSPGSYFSSLFLNPVVDIGEYRSPRSPAEPVLVQMTRTPVAPGLPERDQHRAGQL
                     DILSTSFATFERNIRGQLARILGPGGFDSESDITAITVNRWPHGYAYEYNPLFDPDWP
                     EGAAPHVLGRARFGRIAIANSDAGAAAYTDSAIDQAHRAVQELLQN"
     gene            1921..3630
                     /locus_tag="VNY79_08835"
     CDS             1921..3630
                     /locus_tag="VNY79_08835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="long-chain fatty acid--CoA ligase"
                     /protein_id="HWX72592.1"
                     /translation="MAHIWEKSYPQGVSWDAPLPPPVPLESLLETAASKWPDRIALDF
                     YDRTFTFRELHGLAARAAKGLQALGVGPGVHVGLHLPNTPHFVIGFFAVLMAGGRVVN
                     FSPLAAPRELQYQLADSEAQVTITLGLPMLYPQIAALKGTGKFQTLVVCSIEDFLPAP
                     VARAFGPAADRVAGAGRELDFAALLANDGAFTRHPHGPLEDEIAVLQYTGGTTGQPKG
                     AMLTHANFCAVINIFNHWVGNRGDEEADKALAVLPLFHIFGLTFIMLLTVANGAQAVL
                     HIRFDPERVLADIARKKITVFPAVPTMYTALVNHPKVKEFDLSSVAMWSSGGAPLPME
                     VLQRFEGLTGHSPREGYGLTETAPLGTLQVTDGPARQGSVGLPAPHTILEVVDVETGT
                     NVLPVGERGEICFRGPQIMKGYWKKPQATEEAFRGGRFHTGDIGFLDQDGFVTLVDRK
                     KDMILSGGFNVFPRNIEEAVYEHPGVAEVTVIGVPDAYRGQSAKAFIALKPGQPPFGI
                     DELKAFLADKLAKYEMPTEMEIRASLPKTPVGKLSKKELVAEEMAKRQAAEAPPPGAP
                     KVA"
     gene            complement(3699..4604)
                     /gene="mepA"
                     /locus_tag="VNY79_08840"
     CDS             complement(3699..4604)
                     /gene="mepA"
                     /locus_tag="VNY79_08840"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HWX72593.1"
                     /translation="MSLLFALLFGAGLAAAQDLGTLHPVPLPPLDHPDAPSTPARELF
                     ARKTKPLHAAPRAIGAYNNGCIAGAAELPLNGPGWQVMRVSRNRYWGHPNLVAFIERL
                     GDSAKKAGWNGIRVGDMSQPRGGPMLTGHTSHQIGLDVDIWFTPAPDHEASDEEREFD
                     LSPVVVAEDRRDADPKLWTHAHTEVVRAAAEDRAVSRIFVNAAIKKAMCREAGAHNAW
                     LAKVRPWWHHDEHFHVRLNCPAESSECKPQPPVGSDAGCGHELDSWFKEPMLHPPPPA
                     PPSSPKHQMTLAGMPAACRQLVKAP"
     gene            complement(4642..6282)
                     /locus_tag="VNY79_08845"
     CDS             complement(4642..6282)
                     /locus_tag="VNY79_08845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HWX72594.1"
                     /translation="MEWTLAASPKSRREAHYGNRVVSCFAERPATVSDMFDATTAAKP
                     DGEALVSGEQRWTWREVESEVAACAAALAERGIAAGDRVALLVGNRAEFVVALFAVLR
                     LGAIAVPLSTRYQTPEIAFALSDCGASLLIHDADLAPRLPAPDQVPGVRRRVVVGDAA
                     SRHPDQAEPWRALAPARAAPPPKRGLEEDTAIILYTSGTTGQPKGAMLTHLSLISSAL
                     VFQYCFALTDADRSIAAAPLAHVTGIVANILSMLACSGTLIILPEFKAPAFLALAERE
                     RMTHTLLVPAMYNLCLLTPGFAERDLSTWRIGGFGGAPMPESTITRLAENLPGLNLMN
                     AYGATETTSPSTIMPAEFAASHLLSVGLPVPNCRIVIVNDHGIELPRGETGEIWISGP
                     SVVKGYWNRPDADAESFTAGYWRSGDIGSMDEDGFVYVFDRKKDMINRGGFKIFSAEV
                     ESVLASHPGVVESAIIARPCPVLGERVHAFVTVREPVPSTLELKRYVQDKLSDYKVPE
                     TFTLSIDPQPRNSNGKILKRLLREALRLEADGNPQQRP"
     gene            complement(6479..>7343)
                     /locus_tag="VNY79_08850"
     CDS             complement(6479..>7343)
                     /locus_tag="VNY79_08850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018263226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="UxaA family hydrolase"
                     /protein_id="HWX72595.1"
                     /translation="NAEFESFTIQDVGGTRRAIAEGLDRLRALLPQVNAVRRTEMPAS
                     ELVLGLQCGGSDAWSGVTSNPALGNASDRLVNLGGTAILSETPEIYGAEHLLYARARS
                     PEVSAKLRARLDWWEHYTKINGAEMNNNPSPGNKAGGLSTILEKSLGAVAKAGTSPLN
                     DVIEYAQPCTERGLVFMDSPGFDPCSATGQVASGVTMIAFTTGRGSAYGCKPSPSIKL
                     SSNSEIYTRMRDDIDIDCGTIAAGEVTIEQKGEEILAYLLEVASGRKSKSEELGYGGA
                     EFVPWQVGAVM"
BASE COUNT         1239 a         2401 c         2411 g         1292 t
ORIGIN      
        1 agcatcgccg gcgggctgct gcccgggctt gccatgcctg gccgggcagc tgcggcggcg
       61 ccgcaagacc aagcgggcta ttatccgccg gctctcaccg ggctgcgcgg gagtcacgtc
      121 ggcagcttcg aagtcgccca cagcctgcgc gacggcagtg tttggtcgca atccggcaag
      181 atcaccgata ccggcgagcg ctacgatctg gtggtcgtgg gcggcggcat cagcggtctg
      241 tcagccgcgt acttctatcg cgcacgtcgc agaggcgcgc gcatcctcat tctcgacaac
      301 cacgatgatt tcggcggcca tgccaagcgc tacgagtttc agctcggcgg ccgcctggcg
      361 ctgatcaacg gcggcacttt ccagatcgac agtccgcggc cgtacagtgc cgttgcggac
      421 ggcctcctgc aagagcttgc catcgatccc gtggctcttg cgaacaaatg cgcggaccgt
      481 gatttctatc ggtcgctcgg cctggggcgc agcgtgttct tcgaccgcga gaccttcggc
      541 gccgacaagc tcctggttgc cggcggcgag gcgtcgtgga cgcagctgct cgctcagtcc
      601 ccgttgtcgc cgcaggcgca gagcgacatt gcccgcatcg aggaagcaaa gatcgactac
      661 cttcccggcc tgtcgtctgc ggaaaagaag tcgcggctgt cgaagatgag ctaccgggat
      721 ttcctgctca acgtcaccaa ggcagacccc agcgccatcg ccttctacca ggcgaggacc
      781 cacggcgagt ggggcgtcgg catcgacgcg gtctcggcgc tcgatgtctg ggggttcggc
      841 ttccctggct tccagggcct tgagctcgcg cccggctcgg caccaggcat gggatacacg
      901 gcggcgggct acgccgacgg cgcctcctat accttccatt ttcccgacgg caatgcctcg
      961 attgcgaggc ttctggtccg cagtctcgtc ccggaaagct tgcccggccg gagcgccgag
     1021 gacgtcgtct ctgcgcggct cgactattcc cgtctcgatg atgcggggtc gccggcgcgc
     1081 atccggctcg gcagcaccac tatacgcgtg cgcaatgtcg gagatccggc agcgtcggcc
     1141 gaggtcgaga tcgcgtacat gcgcgccggc gagctttgcg cggtgcgcgc cgggtcatgc
     1201 gtgcttgcct gttacaatat gatcattccc tatctctgcc cggaattgcc ggagccgcaa
     1261 aaggaggcgc tccggtacgc ggtcaaggtc ccgctcatct acgcgagcgt ggccctgacg
     1321 aactggacgg cgttcaaggc cttgggcatc tcgcgggtct attcgcccgg ttcatatttt
     1381 tcctcgctct tcctcaatcc ggtcgtcgat atcggagagt atcgcagccc gcgttccccc
     1441 gccgaaccgg tgctggtcca gatgacgcgc acgccggttg cgcccggctt gcccgagcgc
     1501 gatcaacacc gggccgggca gctcgatatc ctgagcacga gctttgcgac tttcgaacgc
     1561 aacattcgcg gccaattggc gcgcatcctt ggccccggcg ggttcgactc cgaaagcgat
     1621 atcacggcga tcaccgtcaa ccgctggccg cacggttacg cttacgagta caatccgctg
     1681 tttgacccgg actggcccga aggtgcggcg ccgcacgtgc tcgggcgtgc acgtttcggc
     1741 cgcattgcca tcgccaattc cgacgccggc gccgccgcct atacggattc ggcgatcgat
     1801 caggcgcacc gggcggtgca ggagctgctg cagaattagt ttagaatggg ttcgagagcc
     1861 gacaagccgg ggcacgagac cccgcagcaa atcggcaggc ttcgcactgg gaggatgcgc
     1921 atggcgcaca tttgggaaaa atcgtatccg cagggcgtat cctgggacgc gccgttgccg
     1981 cccccggtgc cgctcgagag tctgcttgag accgcggcga gcaaatggcc ggaccgcata
     2041 gccctcgact tctacgatcg caccttcacc ttccgcgagt tgcacggtct tgccgcgcgg
     2101 gccgcgaagg ggttgcaggc gctcggcgtc ggccccggcg tgcatgtcgg cctgcatctg
     2161 ccgaacacgc cgcatttcgt gatcggcttt ttcgcggtgc tgatggccgg cggccgcgtg
     2221 gtcaacttca gtccgctcgc ggcgccgcgg gagctgcaat atcagctcgc cgattccgag
     2281 gcgcaggtca cgatcaccct cgggctgccg atgctctatc cgcagatcgc ggcgctcaag
     2341 ggcaccggca aattccagac gcttgtggtc tgcagcatcg aggacttttt gccggcgccg
     2401 gtcgcgcgcg ccttcggccc cgcggcggat cgtgtcgccg gggccggccg cgagctcgat
     2461 tttgccgcgc tcctcgccaa tgacggcgcc ttcacgcgcc acccgcacgg gccgctcgag
     2521 gacgagatcg ccgtgctgca atacaccggc ggcaccaccg gccagcccaa gggggccatg
     2581 ctgacgcacg cgaacttctg tgccgtgatc aacatcttca atcactgggt tggaaacagg
     2641 ggagacgaag aagcggacaa ggcgctcgcg gtattgccgc tgttccacat attcggattg
     2701 accttcatca tgctgctcac ggtcgccaac ggcgcgcagg cggtgctgca tatcaggttc
     2761 gatccggaac gggtgctcgc cgatattgcc cgcaagaaga tcaccgtatt ccccgcggtg
     2821 ccgaccatgt acaccgcgct cgtcaaccat ccgaaggtga aggagttcga cctttcctcg
     2881 gttgcgatgt ggagttcggg cggcgcgccg ctgccgatgg aagtgctgca gcggttcgag
     2941 ggtctcaccg gccactcccc gcgcgagggc tacggcctca ccgaaaccgc gccgctcggc
     3001 acgctgcagg tgaccgacgg accggcccgg cagggcagcg tcgggctacc ggcgccgcac
     3061 accattctgg aagtggtcga cgtcgagacc ggcaccaatg tgctgcctgt cggcgagagg
     3121 ggcgaaatct gctttcgcgg gccgcagatc atgaaaggct actggaagaa gccgcaggcg
     3181 accgaggaag cttttcgtgg cggccggttt cacaccgggg acatcggctt cctcgaccag
     3241 gacggtttcg tcaccctggt cgaccgcaag aaggacatga tcctctccgg cggcttcaat
     3301 gtgtttccgc gcaacatcga ggaggcggtc tacgaacacc ccggcgtcgc cgaggtcacc
     3361 gtcatcggcg tcccggatgc ctaccgcggg caatcagcca aggccttcat cgcccttaag
     3421 cccggacagc cgccgttcgg catcgacgag ctaaaagcgt tcctcgccga caagctcgcc
     3481 aagtacgaga tgccgaccga gatggaaatc cgcgccagcc tcccgaagac gccggtcggc
     3541 aagctctcga agaaagagct tgtcgccgag gagatggcca agaggcaggc ggccgaagcg
     3601 ccgccgccgg gcgcccccaa ggtcgcctga gcgcaaccct tgcctgggtg atcaggacgg
     3661 cgccgtaagc tcgacctcaa agcccaagag cgcctcgatc aaggcgcctt cacgagctgg
     3721 cggcaagcgg ccggcatgcc cgcgagggtc atctgatgtt tcggcgacga gggcggcgca
     3781 ggtggtgggg gatgcagcat gggttccttg aaccaggaat caagctcgtg cccgcaaccc
     3841 gcgtcactgc cgacgggcgg ctgcggcttg cactcggagc tctcggccgg gcagttgagg
     3901 cgtacatgaa aatgctcgtc gtgatgccac cacggccgca ccttcgcgag ccacgcattg
     3961 tgggcgcccg cctcacggca catcgccttc ttgattgccg catttacgaa gatgcgtgag
     4021 acggcgcggt cctccgctgc ggcgcggact acttcggtat gcgcgtgcgt ccacagcttc
     4081 gggtcggcat cgcgccgatc ttcggccacc acaaccggcg acaagtcaaa ttcgcgctcc
     4141 tcgtccgagg cctcgtggtc aggcgcgggc gtgaaccaga tgtcgacgtc gagcccgatc
     4201 tgatgactgg tgtgtccggt gagcatcgga ccgccgcgcg gctgcgacat gtcgccgacc
     4261 cggataccgt tccagcctgc ctttttagcg ctgtccccga gccgttcgat gaaggcaacg
     4321 aggtttggat gtccccagta gcgattgcgc gacactcgca tgacctgcca ccccgggccg
     4381 ttgagcggca gctccgctgc accggcgata cagccgttgt tgtaggcgcc gatcgcccgt
     4441 ggggcggcgt gcagtggctt ggtcttccgg gcaaacagct cccgcgccgg cgtcgagggc
     4501 gcgtcgggat ggtcgagcgg cggcaacggc actggatgaa gcgtgcccag atcctgcgcc
     4561 gccgccaagc ctgcaccgaa taacagggcg aagagcaacg acaccgaagc gagcaaagct
     4621 gatgttcggt tgcgtgcgac gtcaggggcg ttgttgcggg ttgccatcag cttccagtcg
     4681 cagggcttcg cgcagcaggc gtttgagaat cttgccgttc gaattgcgcg gctgtgggtc
     4741 gatgctcagt gtgaaagtct cggggacctt gtagtcggaa agtttgtcct gcacgtaacg
     4801 cttcagttcg agggtcgaag gtaccggctc gcgcacggtg acgaatgcat ggacgcgctc
     4861 gccgagaacc ggacagggcc gcgcgatgat agcactttcc acgactccgg gatggcttgc
     4921 cagtacgctc tcaacctcgg cggagaaaat cttgaagccg ccccggttga tcatatcctt
     4981 cttgcggtcg aacacgtaga cgaagccgtc ctcgtccatc gagccgatgt ctccgctgcg
     5041 ccaatatccg gcggtgaatg attcggcatc cgcgtccggc ctattccaat agcctttcac
     5101 caccgacggg ccgcttatcc agatttcgcc ggtctccccg cgcggcagct cgatcccgtg
     5161 gtcgttgacg atcacgatcc gacaattggg gacggggagc ccgacgctca gaagatgcga
     5221 cgcggcgaac tccgcgggca tgatcgtcga cggcgacgtc gtctccgtcg cgccataggc
     5281 gttcatcagg ttcaggccgg gcagattttc agcgagccgc gtgatggtcg actcaggcat
     5341 cggggcgccg ccaaagccgc cgatgcgcca cgttgacagg tcccgctcgg cgaagcccgg
     5401 agtcagcagg cagagattgt acatcgccgg gaccaggagc gtgtgcgtca tgcgttcgcg
     5461 ctcggcgagc gccagaaagg ccggagcttt gaattcgggc agaatgatca aggtgccaga
     5521 gcaagcgagc atcgacagaa tattggccac gatgccggtc acgtgcgcga ggggcgccgc
     5581 agcgatcgag cggtcggcat cggttagcgc aaaacagtac tggaagacga gggcggagct
     5641 gatgaggctc agatgcgtca gcatcgcgcc cttgggctgg ccggtggtgc ccgacgtgta
     5701 gagaatgatc gcggtatctt cttcaaggcc gcgcttcggc ggcggagcag cccgcgccgg
     5761 cgccagggct cgccagggtt cggcttgatc ggggtgccga cttgcggcgt ccccgacgac
     5821 cacgcgcctg cggacgccgg gaacctggtc cggcgccgga agccgcggcg cgaggtcggc
     5881 gtcgtggatc aacagcgagg cgccgcaatc gctgagggcg aacgcgatct cgggtgtctg
     5941 gtagcgggtg ctgagcggaa ccgctatcgc gccgagccgc aaaacggcga agagcgcgac
     6001 cacgaattcc gcccggttgc cgacgagaag ggctacgcga tcacccgcgg ctattccgcg
     6061 ctcggcaagc gcggcggcgc acgccgccac ctcgctttca acttcccgcc aggtccagcg
     6121 ctgttcgccg ctgacgaggg cctcgccgtc cggcttcgcg gcggtagtcg cgtcgaacat
     6181 atccgacaca gtcgccggcc gttcggcaaa gcacgagacg acacggttgc cgtagtgggc
     6241 ctcccgtcga cttttgggcg atgcggcgag cgtccattcc atgatcgcga ctcgggaccc
     6301 gccccgcata gtgaactcga atatcgagac tagccggttc gcgaccgcgg tggaatcaac
     6361 gatgggcccg agcgtgcgcc catgcgccgg tggctgtgga tcactcgcat gccgcggatc
     6421 gggtggacgg tgtgcagcgg gaatcttctg gtccgccgcg ccgacgcgga tcgctggcct
     6481 acatgacggc gccgacctgc caggggacga actcggcgcc gccataaccg agctcttcgc
     6541 tcttgctctt ccgtccggat gcgacctcca gcagataggc gagaatctcc tcgcccttct
     6601 gttcgatggt gacttcgccc gcggcgatcg ttccgcaatc gatatcgatg tcgtcgcgca
     6661 tgcgcgtgta gatttcggaa ttggaggaga gttttatcga tggcgagggc ttgcagccat
     6721 atgccgaacc gcgtccggtc gtgaatgcga tcatcgtcac gcccgaagcc acctggccgg
     6781 tcgcgctgca gggatcgaag ccggggctgt ccatgaacac gagcccgcgt tcggtgcacg
     6841 gctgcgcata ttcgatgacg tcattgagcg gcgaggtgcc ggcctttgcg accgcgccga
     6901 gcgacttttc gagaatggtg ctgagcccgc cagccttgtt gcccggcgag ggattattgt
     6961 tcatctccgc gccgttgatc ttggtgtagt gctcccacca gtcgagcctc gcccgcagct
     7021 tcgccgagac ctccggcgaa cgcgcgcgcg catagagaag atgttcggcg ccgtagatct
     7081 ccggcgtctc cgacaggatc gcggtgccgc cgagattgac gaggcgatcc gaggcgttgc
     7141 ctagcgcggg gttggaggtc acccccgacc aggcgtccga cccgccgcat tgcaggccga
     7201 gcaccagctc gctcgccggc atctcggttc ggcgcaccgc attcacctgc ggaagaagtg
     7261 cgcgcaggcg atcgagccct tccgcgatcg cccgccgcgt gccgccgaca tcctggatgg
     7321 tgaacgactc gaactcggca ttg
//
LOCUS       DATMQB010000305         2360 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1057158, whole genome shotgun sequence.
ACCESSION   DATMQB010000305 DATMQB010000000
VERSION     DATMQB010000305.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2360)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2360)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2360
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1057158"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..941)
                     /locus_tag="VNY79_08855"
     CDS             complement(<1..941)
                     /locus_tag="VNY79_08855"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020179138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HWX72596.1"
                     /translation="MTVLDPFNAFCRHIHVELPGAADGPLRGLTFAVKDVFDIAGHCT
                     GNGNPVWLETHAPAERTASSVERLIAAGATMVGKTYTDEMAYSLNGENVHYGTPTNPR
                     APGRIPGGSSSGSAVAVAGSLVDFALGTDCGGSVRLPASYCGIFGIRTTHGLVPVDGV
                     VDLAASFDTVGWFARERQTLRRVGEVLLPAAPTFVPTRLLIADDAFAFAGPEVSAALA
                     EAVDRLKATFTHHRHIQVYTGDPAAWSGIFRVLQGAEIWRRHGAWIDTHRPSFGPGIA
                     ERFRWTRTIDPAEAERMRPQREGVARHMTDLLDGDALL"
     gene            complement(938..2170)
                     /locus_tag="VNY79_08860"
     CDS             complement(938..2170)
                     /locus_tag="VNY79_08860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HWX72597.1"
                     /translation="MDLILRNARRIGAEHELTDIGIAGGRVAAIEPGLAAEGETIDLG
                     GRLVSPGFVETHIHLDKSCILDRCRSERGDLEEAIAEAAKAKAAFTPEDVHSRAVRTL
                     EKAILQGTTHMRTHLEVDPGVGLRGLEGVLPLVKQYSWAIDLEICVFPQEGLLNNPGT
                     DELMVAALDRGCRVVGGAPYTDSNPPGQIDRVFELARDYDIDIDMHLDFGPTADGMDL
                     DHVCRRTQEFQYGGRVAIGHVTKAASLPQPAFDTMAKRLADAGVALTVLPSTDLYLMG
                     RQHKHDHNVTRGVVPAHKLLHHGVNCSLSSNNILNPFTPFGDCSQMRMANLYGNISQV
                     GKKADMRECFNMVTRRPAEMLRLKDYGLAVGKSADLVVLDSATPEAAVAELAPVLYAF
                     KRGRRTVSRQPAILHRPQ"
BASE COUNT          386 a          755 c          821 g          398 t
ORIGIN      
        1 aggagcgcgt cgccgtcgag gaggtcggtc atgtggcgcg cgacgccttc gcgctgcggg
       61 cgcatgcgct cggcctcggc aggatcgatg gtgcgcgtcc agcggaatcg ctcggcgatg
      121 cccggaccga agctcggcct gtgggtgtcg atccacgcgc cgtgccgacg ccaaatctcg
      181 gctccttgca ggacgcggaa gattcccgac caggcggcag gatcgccggt gtagacctgg
      241 atgtgccgat gatgggtgaa cgtcgccttg aggcggtcca ccgcttcggc cagcgccgcg
      301 ctgacttcgg gacctgcgaa agcgaaggcg tcgtcggcaa tcagcagccg cgtgggcacg
      361 aaggtgggtg cggcaggcag cagtacctcg ccgacccgcc gcaaggtctg ccgttcgcgc
      421 gcgaaccatc cgacggtgtc gaagcttgcg gcaagatcga cgacgccgtc gacagggacg
      481 aggccgtgcg tggtacggat gccgaaaatc ccgcaatagc tcgccggcag acgaaccgag
      541 ccgccgcaat cggtgccgag cgcgaaatcc accaggctgc cggcaaccgc gaccgccgat
      601 ccgctcgacg acccgccggg aatccggccc ggcgcgcgcg gattggtcgg cgtgccgtag
      661 tgcacgttct cgccgttgag gctgtacgcc atctcgtcgg tgtaggtctt gccgaccatt
      721 gtggcgccgg ccgcgattaa tcgttccacc gaagacgcag tccgctctgc gggcgcatgg
      781 gtttcgagcc acaccgggtt gccgtttccg gtgcaatggc cggcgatgtc gaacacgtcc
      841 ttgaccgcaa aggtcaggcc gcgcagcggg ccgtctgccg cgccgggaag ctcgacatgg
      901 atatggcggc aaaaagcgtt gaatggatcg agcacggtca ttgcggacgg tgcaggatcg
      961 cgggttgccg cgacacggtc ctgcggccgc gcttgaacgc gtagagcacg ggggcgagct
     1021 cggcgaccgc cgcttcaggg gttgcggagt cgaggaccac gaggtccgcc gacttgccga
     1081 ccgcaagccc gtaatccttg agccgcagca tctcggccgg gcgccgcgtg accatgttga
     1141 agcactcgcg catgtcggcc ttctttccga cctgcgagat gttgccgtag aggttggcca
     1201 tacgcatctg cgagcaatcg ccgaacggcg taaatggatt gaggatgttg ttgctcgaaa
     1261 gcgagcaatt gaccccgtgg tgcagaagct tgtgcgcggg caccaccccg cgggtgacgt
     1321 tgtggtcgtg cttgtgctgc cggcccatca gatagagatc ggtcgagggc agcactgtca
     1381 gcgccacgcc cgcatcggcc agacgcttcg ccatggtgtc gaatgccggc tgcgggaggc
     1441 tcgctgcctt ggtgacgtgg ccgatggcga cccggccgcc atactggaat tcctgcgtgc
     1501 gcctgcagac gtgatcgaga tccataccat cggccgtcgg gccgaaatcc aggtgcatgt
     1561 cgatgtcgat gtcgtagtcg cgcgccagct cgaagacgcg gtcgatctgg ccgggaggat
     1621 tgctgtcggt atagggcgcg ccgccgacca cgcggcagcc gcggtcgagc gccgcgacca
     1681 tgagctcatc ggtgcccgga ttgttcagga gaccttcctg cgggaacacg cagatctcga
     1741 ggtcgatcgc ccaggaatat tgcttcacca gcggcagcac gccttcgagc ccgcgcagcc
     1801 cgacgccggg atcgacttca agatgcgtgc gcatgtgggt cgtgccctgc aggattgcct
     1861 tctcgagcgt gcgcacggcg cgggaatgaa catcctccgg ggtgaacgcc gccttggcct
     1921 tggccgcctc cgcgatcgcc tcttcgaggt cgccgcgttc ggacctgcag cggtcgagga
     1981 tgcacgattt gtcgagatgg atatgggtct cgacgaaacc gggcgacacc agacgaccgc
     2041 ccagatcgat ggtctcgcct tcagcggcga ggcccggttc gatggcggcg acgcgcccgc
     2101 cagcgatgcc gatatcggtc agttcgtgct cggcgccgat gcgccgcgcg ttcctgagta
     2161 tgaggtccat ggcggtcttt cctcccgagg cggcgcttcg gtcacagtgc ggtcccgtga
     2221 tcgccgagat aggcgcgcat cagcgccggg tcgccggcga cttcgcgcgc gctgcccgaa
     2281 tgcttgatcg taccggattg cagcacatag gcccgatcgg cgaccgacag cgcgagcgtc
     2341 gccatctggt cgacgagcag
//
LOCUS       DATMQB010000306         4584 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3217286, whole genome shotgun sequence.
ACCESSION   DATMQB010000306 DATMQB010000000
VERSION     DATMQB010000306.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4584)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4584)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4584
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3217286"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            624..908
                     /locus_tag="VNY79_08865"
     CDS             624..908
                     /locus_tag="VNY79_08865"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72598.1"
                     /translation="MSKLYKAYLALAIAAQKEDGSRTTCIKRFGAFEVRLVELVASQK
                     ADALDLWIELYSHESQSSLDSCSCNDLDEAEPLLEHLICSARELNETSPT"
     gene            complement(933..3203)
                     /locus_tag="VNY79_08870"
     CDS             complement(933..3203)
                     /locus_tag="VNY79_08870"
                     /inference="COORDINATES: protein motif:HMM:NF012321.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HWX72599.1"
                     /translation="MARSLSEQQQSLIATLADQPEIAGTLELVWRQARASMPPALLGD
                     WVAACRDIAAHIGPNAAIAFLRNSPSVAAAAGPQAVAALAALAPDFAEIAGGNATLAL
                     LVAAPHAARRLGTPQAFGEWLRVVRRIAETAPESVGLLLDRSARVLDSLDLRSFETWA
                     LGGIRAAENDPERRLRFFALLDTQALHAIEHGADSIAFTDVESELKAFIAALWHVTPP
                     IRVLPPAGFDTPRRPCFSNGVVRVPQSSRGVDGQSGKDLFRAALAHVMAHFQFGGGKF
                     PLGSLKPVQIALVSLIEDARVEQLAIGRFPGLRRFWLPFHLADASGVVTAPALMARLA
                     RALLDPGYFDAHAWVSKGRDLFFAERVRWTDPAISRSVGGLLGNDLGQMRVQFNPRTY
                     VVEPAYRDDHQGLWDFPSAAEAAGESLYESVRFEQSETEPADREREAGGSVPVNVARL
                     TPEEAEVGIPVARYPEWDYLISRDRGEWTTVLEYNPADGRAEQIDNILERYPETAYRI
                     AALVRAAKVSRPLRVRRQREGDRLDLEATITAAIDLRAGLTPSPNVYARLERRWRDLT
                     VLVLIDASQSTNDIVKAAGRSVLELERDATSLLAHAMDGMGDPFAIHAFCSDTREDVH
                     YYRLKDFDTLWGTLAKRRLAGVTGRFSTRMGAALRHAGRDLAACQSYRKLLLLVSDGE
                     PSDVDIADRRYLVEDARRAVLSLQHQGIDLFCVGLDAGGDSYLTRIFGRSNVIQLDRI
                     ERLPEKLPLLYFRLAG"
     gene            complement(3210..4007)
                     /locus_tag="VNY79_08875"
     CDS             complement(3210..4007)
                     /locus_tag="VNY79_08875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009450467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbbQ/NirQ/NorQ/GpvN family protein"
                     /protein_id="HWX72600.1"
                     /translation="MELPDYLIAAEPYYRPIGDEVALFEAAYADRMPMMLKGPTGCGK
                     TRFVEYMAWRLKKPLVTVACHEDMTASDLVGRHLLDTGGTVWHDGPLTVAARHGAICY
                     LDEIVEARQDTTVAIHPLTDDRRVLPLEKTGELVRAHADFQLVISYNPGYQSVLKDLK
                     ESTKQRFGAMDFGYPPAAIEAEIVAHEAGIEGAVADKLVAIGQRSRNLKGHGLDEGAS
                     TRMLIQAGRLIAHGVSIEAACQIALVLPITDDADIRGALTAAITASI"
     gene            complement(4110..>4584)
                     /locus_tag="VNY79_08880"
     CDS             complement(4110..>4584)
                     /locus_tag="VNY79_08880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HWX72601.1"
                     /translation="QGYMYPAKDQQVIMAKAMAWANIVYVAVANAAGFDGVYSYFGHS
                     AIVGFDGRTLGECGEEDMGIQYAQLSKSLIRDARRNMQAQNHLFKLVHRGYTGKINSR
                     EDVRGEAVCPYDFYKKWITDPEGTRTMVEALTRSTVGTDECPIEGIPNQKTAAHR"
BASE COUNT          781 a         1495 c         1551 g          757 t
ORIGIN      
        1 gtcagtcaga ttgcctggct gctggggtat tccgaagtca gctcgttcaa tcatgccttt
       61 aaccgatgga cgtccagcag tcccagggcg gtgcgaagta gccgcaaaaa tcgccggggc
      121 acgacatgat attctcgtag gcttttttgc ggcgcggcgg gactaccaag cccgccaatg
      181 tcctccctaa cttgcaaaaa ttgcacgagg ccccgagtcg gcggaagaat attcacacgg
      241 cggcgacgag cgcgcgacgc gccgaggtgt ggcgccggca atctcgcgga gctcgcactc
      301 accggcgacg gccttttgac gctgaatcaa cgacgcatca cggagcggct tgaacggagg
      361 gcggcgcttt ggcggcgaca tgtccgcgcg gccaacgtcg ggcgaccatt gttgtgactt
      421 gccgcctcga gcacgcacgc attcgcgtcc gcttttccgg cgccgaggca agcacaacgc
      481 tagtttggct cccaaaagca acacattggc gcaccggagc aagttcacgc tcgtttcctt
      541 gcttataaga gcatcgtctc gaccccggtt tcaacttcgc cgtcgtggcg actggaagcc
      601 aagttcgacg gaggaagcgc ttcgtgagta agctctacaa ggcgtaccta gcccttgcca
      661 tcgccgccca aaaagaggat gggtcgcgca cgacctgtat taagcgtttc ggcgctttcg
      721 aagtccgatt ggtagagctt gttgcgagcc aaaaggcgga cgctctagac ctttggatcg
      781 agctgtatag ccacgagtcg cagtcgtcat tggacagctg ctcatgcaac gatctcgacg
      841 aagcggagcc gctgctggag cacctcatct gctcggctcg agagttgaat gaaacaagcc
      901 ccacgtaagt gcgcgacagc cggtcaacaa ttttagccgg cgagcctgaa atagagcagc
      961 ggcaattttt cgggaagccg ctcgatgcga tcgagctgga tgacgttgga gcgcccgaag
     1021 atgcgggtca gataggaatc gccgccggcg tcgaggccga cgcagaacag gtcgataccc
     1081 tggtgctgca gcgagagcac ggcgcggcgg gcgtcctcga cgagatagcg ccggtcggcg
     1141 atgtcgacgt cggagggctc gccgtcgctg acgaggagca ggagcttgcg atacgactgg
     1201 caggcggcga gatcgcgtcc ggcgtggcgc agcgcggcgc ccatgcgggt cgagaaccgg
     1261 ccggtgacgc cggcaagccg gcgcttcgcc agcgtccccc aaagggtgtc gaagtccttg
     1321 agccggtaat agtgcacgtc ctcgcgggtg tcggagcaga aggcgtggat ggcgaacggg
     1381 tcgcccatgc cgtccatcgc gtgcgccagc agcgaggtcg cgtcgcgttc gagttcgagc
     1441 actgaccggc cggcggcctt gacgatgtcg ttggtcgact gcgacgcatc gatcagcacc
     1501 agcacggtaa gatcgcgcca gcgccgctcg agccgcgcat agacgttggg actcggcgtc
     1561 agtccggcgc gcaggtcgat cgccgccgtg atcgtcgctt cgagatcgag ccggtcgccc
     1621 tcgcgctggc ggcgcacgcg caacggccgg ctcactttcg ccgcgcgcac cagcgccgcg
     1681 atgcggtagg cggtttccgg gtagcgttcg aggatgttgt cgatctgctc ggcgcggccg
     1741 tcggcgggat tgtactcgag caccgtcgtc cattcgccgc ggtcgcggct gatcagatag
     1801 tcccattccg ggtagcgcgc gaccggaatg ccgacttcgg cctcctccgg cgtaagccgc
     1861 gcgacgttca ccggaacgct accgcccgcc tcgcgttcgc gatccgccgg ctctgtctcc
     1921 gattgctcga agcgcaccga ttcgtagagc gactcccccg ccgcttccgc cgccgagggg
     1981 aagtcccaga gcccctgatg atcgtcgcga taggccggct cgaccacgta ggtgcgcgga
     2041 ttgaactgca cccgcatctg cccgagatcg ttgccgagca ggccgccgac gctgcggctg
     2101 atcgccgggt cggtccagcg cacacgttcg gcgaaaaaca ggtcgcggcc cttgctcacc
     2161 caggcgtggg cgtcgaaata acccggatcg agcagcgcgc gggcgagccg cgccatcagc
     2221 gccggcgcgg tcacgacgcc gctggcgtcg gccagatgga acggcagcca gaaacggcgc
     2281 aggcccggaa agcggccgat cgccagctgc tcgacgcggg cgtcctcgat caatgaaacg
     2341 agcgcgatct gcaccggctt gaggctgccg agcggaaact tgccgccgcc gaactggaaa
     2401 tgcgccatca cgtgcgccaa ggccgcacgg aacaaatcct tgccgctctg cccgtcgacg
     2461 ccgcgggagg attgcggcac gcggaccacg ccgttgctga agcacgggcg ccgcggcgtg
     2521 tcgaagccag ccggcggcag cacccggatc ggcggcgtca cgtgccacag cgcggcgatg
     2581 aacgccttga gctcgctctc gacgtcagtg aaggcgatgc tgtcggcgcc gtgctcgatc
     2641 gcgtgcagcg cctgcgtgtc gagcagcgcg aaaaatctca agcgacgttc ggggtcgttc
     2701 tcggcggcgc gaatcccgcc cagcgcccag gtctcgaacg agcgaagatc gaggctgtcg
     2761 agcacgcggg cggaacggtc gaggagcagg ccgacggatt ccggcgccgt ttcggcaatg
     2821 cgcctgacca cccgcagcca ttcgccaaag gcctgcggcg tgccgagccg gcgcgccgca
     2881 tgcggcgccg cgaccaacag cgccagcgtc gcgttgccgc cggcaatctc ggcaaaatcg
     2941 ggggccaaag cggccagcgc cgcgacggct tgcggccccg cggcggcggc gaccgacggg
     3001 gaattacgca gaaaggcgat ggcggcattc ggcccgatgt gcgcggcgat gtcgcggcag
     3061 gcggccaccc agtcgccgag cagcgccggc ggcatgctcg cgcgcgcctg gcgccacacc
     3121 agttcgagcg tcccggcgat ctccggctgg tcggcgagag tcgcgatcag ggattgctgc
     3181 tgctcggaga gactcctggc catggaccgt caaatggagg cggtgattgc cgccgtcagc
     3241 gcgcccctga tatcggcgtc gtcggtgatc ggcaacacca gcgcaatctg acaggcggcc
     3301 tcgatcgaga cgccgtgggc gatgagccgc ccggcctgga tgagcatgcg cgtcgaagca
     3361 ccctcgtcga gaccgtggcc cttgagattg cgcgagcgct gcccgatcgc gaccagcttg
     3421 tccgccaccg cgccttcgat gccggcctcg tgcgcaacaa tttcggcctc gatggcggcg
     3481 ggcggatagc cgaagtccat cgcgccgaag cgctgcttgg tcgattcctt gaggtccttg
     3541 agcacgctct gatagcccgg gttataggag atgacgagct ggaagtcggc gtgtgcgcgc
     3601 accagctcgc cggtcttttc cagcggcagc acgcggcggt cgtcggtcag ggggtgaatg
     3661 gccacggtgg tgtcctggcg cgcctcgacg atctcgtcga gatagcagat ggcgccatgg
     3721 cgcgccgcta ccgtcaacgg accgtcgtgc cagacggtgc cgccggtgtc gaggagatgg
     3781 cgacccacca gatccgacgc cgtcatgtcc tcgtggcacg ccaccgtcac cagcggcttc
     3841 ttgaggcgcc acgccatgta ttcgacgaag cgcgtcttgc cgcagccggt cgggcctttc
     3901 agcatcatcg gcatgcggtc ggcataggcc gcctcgaaga gcgcgacctc gtcgccgatc
     3961 gggcggtagt agggttccgc cgcgatgaga tagtccggga gttccatcgc cgtcgcttct
     4021 ctggaggtga tgacgagctc ggcggcgggc gggacggcac gccgcgcgcc tgccgccccg
     4081 acgctgcttg gccgtccctc gaggcgccgc tagcgatgcg cggcggtctt ctggttgggg
     4141 atgccctcga tcggacactc atccgttccc accgtcgagc gggtcagcgc ctccaccatc
     4201 gtccgcgtgc cctcggggtc ggtgatccat ttcttgtaga aatcgtaagg gcataccgcc
     4261 tcgccgcgga cgtcttcgcg cgagttgatc ttgccggtgt agccgcggtg caccagcttg
     4321 aagagatggt tctgcgcctg catgttgcgc cgggcgtcgc gaatcagcga cttcgagagc
     4381 tgcgcgtact ggatgcccat atcctcctcg ccacattcgc cgagcgtcct gccgtcgaac
     4441 ccgacgatgg cggaatgccc gaaataggaa tagacgccgt cgaacccggc ggcgttggcg
     4501 acggcgacgt agacgatgtt ggcccaggcc atggccttgg ccatgatcac ctgctgatcc
     4561 tttgccggat acatgtagcc ctgg
//
LOCUS       DATMQB010000307         4218 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1982559, whole genome shotgun sequence.
ACCESSION   DATMQB010000307 DATMQB010000000
VERSION     DATMQB010000307.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4218)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4218)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4218
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1982559"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..244
                     /locus_tag="VNY79_08885"
     CDS             <1..244
                     /locus_tag="VNY79_08885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HWX72602.1"
                     /translation="RRGGHAEREFWRRTLERGEATDADLEHAIGLMAKHRALEDTIGR
                     AHHYGAIARDALALFPDSPMKSALAETVDFCIARTH"
     gene            complement(291..1160)
                     /locus_tag="VNY79_08890"
     CDS             complement(291..1160)
                     /locus_tag="VNY79_08890"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012590157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050515 - 4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HWX72603.1"
                     /translation="MLVPLVENAPAKINLTLRVLGRRPDGYHDLESLVVFADFGDRLS
                     FVRDGELSLTVRGPNAAQAGEGADNLVLKAATALAALEPAVGLGAFHLDKALPVAAGI
                     GGGSADAAAALRLLAKANGLAPEHPALFAAARSTGADVPVCLDPRPRIIRGIGEVLSP
                     PLSLPALPAVLVNPGVALTTKAVFARWTAPAAPPVALDVAAIAKLENRDAFLQLLATQ
                     ANDLEAPAIALAPVIADVLATLRVLGCSLARMSGSGATCFAIFASASAAREAAKAVHD
                     HYPHWWVQACVLG"
     gene            complement(1167..2876)
                     /locus_tag="VNY79_08895"
     CDS             complement(1167..2876)
                     /locus_tag="VNY79_08895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HWX72604.1"
                     /translation="MAGAVVILGLPSALAAQPPTPQEIMHATTAGSYLAARHAGTERD
                     SATAAAYYLNVLKADPRNADLLGRTFLSVLTDGDIEEAGKLADRLIQVDRTDRIARLV
                     VGVRALKQKQYALARQSFAQSVRGPVTDLTATLLTAWALAGAGDARGATDALDHLTGP
                     DWYAIFKDLHGGLILDFGNNRKDAAKRYERAYKADSTALRTVQAYARFLSRNGGKNEA
                     LKIYQEFNKAVPDHPLISAEMKDLAAGEKLPALVDSPQAGAAEALYGLGASIGRRGGE
                     DLALIYLQLALYLEPTHAMALLSLADLYESLKKPDLAIKVYDRIPPSPLRRNADIQVA
                     SDLDQLERTDEAKKRLEHLIAEHPKDTEAIVAFGNILRGRKQFAECADVYGKAIANVP
                     KPEKSNWVMFYFRGICYERSKQWPNAEVDLKKALELYPDQPLVLNYLGYSWVDQGVHM
                     DEGMNMIRRAVEQRPDDGYIVDSLGWAYFRTGNYAEAVKNLERAVELKPEDPTINDHL
                     GDAYWRVGRALEARFQWSHAKDLNPDKDDLPKIEEKLKSGLPDDTSSAADAAKTKKVG
                     NGG"
     gene            complement(3327..>4218)
                     /locus_tag="VNY79_08900"
     CDS             complement(3327..>4218)
                     /locus_tag="VNY79_08900"
                     /EC_number="1.5.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004174 -
                     electron-transferring-flavoprotein dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0022900 - electron transport chain
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="electron transfer flavoprotein-ubiquinone
                     oxidoreductase"
                     /protein_id="HWX72605.1"
                     /translation="DNLVAVGFVVHLNYENPYLSPFDEFQRFKTHPLVRDTFAAGKRI
                     CYGARALTEGGWQSVPKLAFSGGALIGCAAGFMNVPRIKGSHNAMLSGMLAAEHVAAA
                     LADGRAHDELASYDAAWRESAIGHDLWRVRNAKPLWSKLGTLAGVALGGFDMWTNTLG
                     FSLIGTLRHGKPDSATLKPAAQCRPIAYPKADGKLTFDKLSSVYLSNTNHEEDQPPHL
                     IVRDAALQKSSEHDVYAGPSTRYCPAAVYEWVEEGGQPRYVINAQNCVHCKTCDIKDP
                     NRNITWVPPEGGGGPNYSNM"
BASE COUNT          710 a         1351 c         1423 g          734 t
ORIGIN      
        1 ccgccgcggc ggccacgccg agcgcgaatt ctggcggcgc acgctcgagc gcggcgaagc
       61 gaccgatgcc gacctcgagc acgccatcgg cctcatggcc aagcatcgcg cgctcgagga
      121 cacgatcggg cgcgcccacc actacggcgc catcgcccgt gacgcgctcg ccctctttcc
      181 cgactcgccg atgaagtcgg cgctggccga aacggtcgac ttctgcatcg cgcgcacgca
      241 ctaggctcgc catcattcaa cgcgccgcgt ttctccggcc cgcaatgatg ctacccgagc
      301 acgcacgcct gcacccacca atgcggatag tggtcgtgca cggctttcgc cgcttcccgt
      361 gcggcggacg ccgaggcaaa aatcgcgaag caggtcgcgc cggagccgga catgcgcgca
      421 aggctgcagc cgagtactcg cagcgttgcg aggacatcgg cgatcaccgg cgccagcgca
      481 atggcgggag cttcgagatc attcgcttgc gtggcgagaa gctgcagaaa cgcgtcgcgg
      541 ttttcgagct tggcgatcgc cgcgacgtcg agggcaacgg gaggagcggc cggggccgtc
      601 cagcgcgcga acaccgcctt ggtcgtcagc gcgacacccg gattgaccag taccgccggg
      661 agtgccggca gcgacaacgg cggcgacagc acctcgccga tgccgcggat gattcgcggg
      721 cgcggatcga ggcagaccgg gacgtcggcg ccggtcgagc gcgcagcggc gaagagggcc
      781 ggatgctcgg gcgcaagccc gttggccttg gcgaggaggc gtagtgccgc tgccgcgtcg
      841 gccgatccgc cgccgatgcc ggcggcaacc ggcagcgcct tgtcgaggtg gaatgcgccc
      901 agcccgaccg caggctcgag cgcggcaagc gcggttgccg ccttgagtac gagattgtcc
      961 gcgccctccc ccgcctgcgc ggcgttcggg ccgcgcacgg tcagcgaaag ctcgccgtcg
     1021 cgcacgaagc ttagccggtc gccgaaatcg gcgaacacca ccaggctctc gagatcatgg
     1081 tagccgtcgg gccgccggcc gagcacccgc agcgtcagat tgatcttggc cggcgcgttt
     1141 tcgaccagcg ggacaagcaa ggaaaactac ccgccgttgc cgaccttctt cgtcttggcg
     1201 gcatccgccg ccgaggacgt gtcgtcgggc agcccggatt tgagtttttc ctcgatcttg
     1261 ggcaggtcgt ccttgtcggg attgaggtcc ttggcgtgcg accattggaa acgcgcttcc
     1321 aaggcgcggc cgacgcgcca ataggcatcg ccgagatggt cgttgatggt cgggtcctcg
     1381 ggcttgagtt cgacggcgcg ctcgaggttc ttcaccgcct ccgcgtaatt gccggtgcgg
     1441 aaataggccc agccaagtga gtcgacgatg tagccgtcgt ccggccgctg ctcgacggcg
     1501 cggcggatca tgttcatgcc ttcgtccata tggacgccct ggtcgaccca ggaatagcct
     1561 aggtaattga gcacgagcgg ctggtcggga taaagctcga gcgccttctt caggtcgact
     1621 tccgcattcg gccactgctt ggagcgctcg tagcaaatac cgcggaaata gaacattacc
     1681 cagttcgact tctccggctt cggcacgttg gcgatggcct tgccatagac atcggcacat
     1741 tcggcgaatt gcttgcgccc acgcaggatg ttgccgaacg caacgatcgc ctcggtgtcc
     1801 ttgggatgct cggcaatgag gtgttcgagg cgctttttcg cttcgtcggt gcgctcgagc
     1861 tgatcgagat cggaggccac ctggatgtct gcattgcggc gcagcggcga cggcggaata
     1921 cggtcgtaga ccttgatcgc gaggtccggc ttcttcagcg attcgtagag gtcggcgagc
     1981 gaaagcaacg ccatcgcgtg cgtcggctcg aggtagagcg caagctgcag gtagatgagc
     2041 gccaaatcct cgccgccgcg gcgtccgatc gaggcgccga gaccatagag cgcctcggcg
     2101 gcgccggcct gaggcgaatc aacgagcgcc ggcagcttct cgcccgccgc caggtccttc
     2161 atttccgccg agatgagcgg atggtcgggc actgccttgt tgaattcctg ataaatcttc
     2221 agcgcttcat tcttgccgcc gttgcgcgac agaaagcgtg cataagcctg gacggtacgc
     2281 agcgccgtag agtcggcctt gtaggcacgt tcgtagcgct tggccgcatc cttgcggttg
     2341 ttgccgaaat cgaggatcag gccgccatgc aggtccttga agatcgcgta ccaatccggg
     2401 ccggtgaggt ggtcgagggc atcggtcgcg ccgcgcgcat caccggcgcc agccagcgcc
     2461 catgccgtca gcagcgtcgc cgtcagatcg gttaccgggc cgcgcaccga ttgcgcgaaa
     2521 ctctggcggg cgagcgcgta ttgcttctgc ttgagcgccc gcacgccgac gaccagccgc
     2581 gcgatgcggt cggtgcggtc gacctggatc agccggtcgg caagcttgcc ggcttcctcg
     2641 atatcaccgt cggtgaggac ggagaggaag gtgcggccga ggaggtcggc attgcgcgga
     2701 tcggccttga gcacgttgag gtaataggcg gccgcagtcg ccgagtcgcg ctcggtgcca
     2761 gcatgccgcg cggccaggta gctcccggcc gtggtcgcgt gcatgatttc ctgcggtgtc
     2821 ggcggctgcg cggcgagcgc cgaaggcagc cccaagatga cgacggcgcc ggcaatggcg
     2881 acgtgccggg acaatagcga atgagtcacg cgatctccct tgagcgtttg ggaataggca
     2941 gccgaatgcc gtcctatgcg agaatggacc ttttgccctg tgcctgcaag aatgcaaggt
     3001 cgatatcgcc gctcccgcac aaaacctgca acgaggaatt ccgctggcgc cgcccggcgc
     3061 agcggcaccg acgacgtaaa agccggcgtt tcctccggcg gcacctgtct ttaatccgaa
     3121 acggcggcga aatagcggcg gggagcgcct ggctcattcg cctagccgct gggcatgcgt
     3181 ctcggcgttt ggtgaacccc atgccggcga tttgcatttc ttcccgcgct acctcggggg
     3241 cgacagaagg tagcgactgc ctcaagggac catttcgtgg tcctggtcac ggcggtcgca
     3301 ccgcgacccc gcgtccatac cctaactcac atattggaat agttcggccc accgccgcct
     3361 tccggcggca cccaggtgat gttgcggttc gggtctttga tgtcgcaggt cttgcagtgc
     3421 acgcagttct gcgcgttgat gacgtagcgg ggctgcccgc cctcttccac ccattcatag
     3481 acggcggctg ggcaataccg cgtcgacgga ccggcataga cgtcgtgctc ggatgatttc
     3541 tgcagggcgg cgtcgcgcac gatgaggtgc gggggctggt cttcctcgtg attggtgttc
     3601 gacagataga ccgaggaaag tttgtcgaag gtgagcttgc cgtccgcttt cgggtaggca
     3661 atggggcggc attgcgcggc cggcttgagc gtcgcggaat cgggtttgcc gtgcctgagc
     3721 gtgccgatga gcgagaagcc gagcgtgttg gtccacatgt cgaacccgcc aagcgccacg
     3781 cccgcgagcg taccgagctt cgaccacagt ggcttggcat tgcgcacgcg ccagaggtcg
     3841 tgcccgatcg ccgattcccg ccacgccgcg tcgtagctcg caagctcgtc gtgcgcgcgc
     3901 ccgtcggcaa gcgcggcggc aacgtgttcc gccgccagca tgcccgacag catggcgttg
     3961 tgactgccct tgatccgcgg gacattcatg aagccggcgg cacagccgat gagcgctccg
     4021 ccggagaaag cgagcttagg caccgattgc catccgcctt cggtgagggc gcgcgcgccg
     4081 tagcagatgc gcttgccggc ggcgaaagta tcgcgcacca gcggatgcgt cttgaaacgc
     4141 tggaactcgt cgaacggcga cagatacgga ttctcgtagt tgaggtggac gacgaagccg
     4201 accgccacga gattgtcc
//
LOCUS       DATMQB010000308         4750 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1058652, whole genome shotgun sequence.
ACCESSION   DATMQB010000308 DATMQB010000000
VERSION     DATMQB010000308.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4750)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4750)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4750
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1058652"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            22..765
                     /locus_tag="VNY79_08905"
     CDS             22..765
                     /locus_tag="VNY79_08905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HWX72606.1"
                     /translation="MAERNATAAVVGAGDFIGAAIAKKFAAEGFTIFAGRRNADKLAP
                     LVNDIETAGGKVVARGLDARKEEDITAFLRAADAHAPLEVCIFNVGGNVNFPLLDTTE
                     RVFRKVWELACYAGFLAGREAARVMLSRGQGCIFFTGATASMRGGVGYAAFASAKSGL
                     RSVAQSMARELGPKNIHVAHLVIDAGVDTAFVRERIRQQSGAEALERLDADQLMHPSS
                     VAEAYWQLYRQPRDAWTFELDMRPYREVW"
     gene            767..1375
                     /locus_tag="VNY79_08910"
     CDS             767..1375
                     /locus_tag="VNY79_08910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxychromene-2-carboxylate isomerase"
                     /protein_id="HWX72607.1"
                     /translation="MGAVEFHFDFGSPNAYLAHLVVPEIEKRTGAKFEYVPILLGGVF
                     KLTNNRSPAESMRGIKNRLEYEELERQRFVRRHAITRFTFNPFFPVNTLLIMRGAVAA
                     QLEGVFDRYVDEVFRHMWAQPKKMDDPEVVHAVLEQSGLNAAALLARTQEPAVKDRLL
                     KNTEASVARGAFGSPTFFVGSEIFFGKDRLRDVEEELARAKT"
     gene            1415..2317
                     /locus_tag="VNY79_08915"
     CDS             1415..2317
                     /locus_tag="VNY79_08915"
                     /inference="COORDINATES: protein motif:HMM:NF024824.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HWX72608.1"
                     /translation="MRCGRAPVHPPPDWYTLWAMGARGSLHARQWPGSPSGGEAVKRR
                     GFILTVILMTGGWRGLRTRFACVLAPALWLALAASPAAAQVSQQASYADPSFQTILNN
                     PGNLASQVKYAAGAKDDPDIENAISAYDRLLFYNPALARVRFELGVLYARLGSYQQAR
                     AYFESALQMRDITPEMAEHAQRYIAILDRKLSPDQFTGFAQTGLRYQTNATLGPGPQP
                     VLASGRNFNSAFTARPDWNWFGSFALNYSHDFGTQDGDALEATLIGYDAQQFKVHQVD
                     LGLAELRAGPRFVFPAMNGASVKP"
     gene            2377..2901
                     /locus_tag="VNY79_08920"
     CDS             2377..2901
                     /locus_tag="VNY79_08920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72609.1"
                     /translation="MTFHANALGIAWDPFVEVIQQSFRNSDVYPLASGLRGPLTTAAL
                     QASGPIVSGWYWQTRIAYQREDALFNPFGYNAFAADLWLPWNFSFPGDQRVWTLTPSF
                     GVIDWVYFAPDPSINPAVAQHSVEWRVALGLDIPLIDQLYLGARVQYLTIVSNLSVFN
                     MRDLQVSAGPTLKF"
     gene            2910..3743
                     /locus_tag="VNY79_08925"
     CDS             2910..3743
                     /locus_tag="VNY79_08925"
                     /inference="COORDINATES: protein motif:HMM:NF016648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FecR domain-containing protein"
                     /protein_id="HWX72610.1"
                     /translation="MELEKTIALLLAGTALFTSPVFAQEVGTATAVNPESQSTPPGGS
                     TTTLKVGARVVHKERIKTTPQGSVQLLFLDRSTLSIAPNSEIVIDEFVYNPGAGSGHM
                     AVSLAKGALRLVGGQLSHQGEASVTTSGATIGIRGGTSIITLTEAININGLLTLGNGC
                     PPVKRPGWKITLPCGPITQATAAELAYFISLFGGRFGGNGGVPGLTNAQLNALGIILP
                     WFPPPPGTPPPNGTDPNNTIIQGTQHGAGTSPPPPPPPPPPPPPSPPPCVGDCLGTRR
                     Q"
     gene            complement(3757..>4750)
                     /locus_tag="VNY79_08930"
     CDS             complement(3757..>4750)
                     /locus_tag="VNY79_08930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042242 - cobyrinic acid a,c-diamide
                     synthase activity [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cobyrinate a,c-diamide synthase"
                     /protein_id="HWX72611.1"
                     /translation="AAHFRLPVVLLIDVAGQAQSAAAVVRGFAAHDAAVQVAGVILNR
                     VAGERHRMLVADAIAALGVPVLGALPRDAALALPERHLGLVQAHEHPDLDALIDRLAA
                     TAERHIDLGALAGAAGPFKFAATASAAAALPPPGQRIAFASDRAFSFVYPHLLEAWRQ
                     AGAEIVPFSPLADEPPPKRADSCWLPGGYPELHADALAAAHRFSAGLRYFAETWPVHG
                     ECGGYMVLGESLEDKAGRRHAMTGLLSHATSFAKPKLHLGYRTARLLSDCLLGRGGTV
                     VRGHEFHYAALVSAGTDEPFAEVTDSDDGRREKAGGRRGRVTGAFFHAIAAAQR"
BASE COUNT          777 a         1622 c         1566 g          785 t
ORIGIN      
        1 cggcgcgcgg ggaggacgga gttggctgag cgcaatgcca ccgcggcggt cgtcggagcc
       61 ggagatttca tcggcgccgc catcgcgaag aagttcgccg ccgagggctt caccatcttc
      121 gccggccggc gcaacgccga caagctcgcg ccgctcgtca acgacatcga aaccgccggc
      181 ggcaaggtcg tggcgcgcgg gctcgatgcc cgcaaggagg aggacatcac cgcctttctg
      241 cgcgccgccg acgcgcacgc gccgctcgaa gtctgcattt tcaatgtcgg cggcaacgtc
      301 aattttccgc tgctggacac gaccgagcgc gtgttccgca aggtctggga gctggcctgc
      361 tacgccggct tcctcgccgg gcgcgaagcg gcccgggtga tgctgtcgcg cggtcagggc
      421 tgcatcttct tcaccggcgc gaccgcgagc atgcgcggcg gcgtcggcta tgcggcgttc
      481 gccagcgcca aatccggcct gcgctcggtc gcgcagagca tggcgcgcga gctcgggccg
      541 aagaacatcc acgtcgcgca cctcgtcatc gatgccggcg tcgacaccgc tttcgtgcgc
      601 gagcgcatcc gccagcaatc cggcgccgag gcgttggagc gcctcgatgc ggaccagctc
      661 atgcatcctt cctcggtggc tgaggcctac tggcagctct accggcagcc gcgggacgcc
      721 tggacgttcg aactcgacat gcgcccgtat cgggaggtct ggtgagatgg gcgcggtgga
      781 atttcatttc gacttcggca gccccaatgc ctatctggcg cacctcgtcg tccccgagat
      841 cgagaagcgg accggagcca agttcgagta cgttccgatc ctgctcggcg gcgtcttcaa
      901 gctgaccaac aaccgctcgc cggccgaaag catgcgcggc atcaagaacc ggcttgaata
      961 cgaggagctg gagcggcagc gcttcgtccg gcgccacgcc atcacgcggt tcaccttcaa
     1021 cccgttcttc ccggtcaaca cgcttctgat catgcgcggc gcggtcgcgg cgcagctcga
     1081 aggcgtgttc gaccgctacg tcgacgaggt gttccgccac atgtgggccc agccgaagaa
     1141 gatggacgat cccgaggtgg tgcatgcggt gcttgagcaa tccggtctga acgccgccgc
     1201 cctgctggcg cgcacgcaag agcccgcggt caaggaccgt ctgctcaaga acacggaagc
     1261 gagcgttgcc cgcggcgcct tcggcagtcc gaccttcttc gtcggcagcg aaatattctt
     1321 cggcaaggac cggctgcgcg acgtcgaaga agagctagcc cgggcaaaga cttagcgctc
     1381 ggcgtggcaa acgagcgacg ccgccggact agttgtgcgc tgcggccgcg cgcctgttca
     1441 cccccctccg gattggtata cgctgtgggc gatgggcgct cgcggaagcc tgcacgcgag
     1501 gcagtggcca ggttcgccaa gcggcggcga ggcggtcaaa cggcggggct ttattttgac
     1561 agttattttg atgacgggcg gttggcgcgg cttgcgaacc cgattcgcct gcgttttggc
     1621 gccggcgctg tggcttgccc ttgcagcctc gcccgctgct gcgcaggttt cgcagcaggc
     1681 gagctacgcc gatcccagct tccagaccat tttgaacaat cccggcaatc tcgccagcca
     1741 agtcaaatat gcggccggtg cgaaagacga tcccgatatc gagaacgcca tcagcgccta
     1801 cgaccgcctg ctcttctaca acccggcgct cgcgcgcgtg cgcttcgaat tgggggtgct
     1861 ttacgctcgc ctcggttcct accagcaggc gcgtgcctat ttcgagtcgg ccctgcagat
     1921 gcgcgacatc accccggaga tggcggagca cgcgcaacgg tacatcgcca ttctcgaccg
     1981 gaaactgtcg cccgaccagt tcaccggctt cgcgcagacc ggacttcgtt atcagaccaa
     2041 tgcgacgctc ggtcctggtc cacagccggt cttggcgtcc ggccgcaact tcaacagcgc
     2101 gttcacagcc cgtccggact ggaattggtt tggatcgttc gcgctgaatt acagccacga
     2161 tttcggcacg caggatggcg acgctctcga ggcgacgctg atcggctacg acgcccagca
     2221 attcaaggtg catcaggtcg atctcggctt ggccgaattg cgggcgggtc cgcgctttgt
     2281 ttttcccgcc atgaatggcg cctccgtcaa accttaggtc gccgccaccg gcagcctgct
     2341 cgccgatcag gtttactctg gcggcgtcgg cggcgcgtga ccttccacgc gaatgcgctc
     2401 ggcatcgcct gggacccttt cgtcgaggtc attcagcaga gcttccgcaa ctccgacgtc
     2461 tatccgctcg ccagcggcct caggggcccg cttacgaccg cggcgctgca ggcgtctggc
     2521 ccgatcgtat ccgggtggta ctggcaaacc cgcatcgcct accagcgcga ggacgccctc
     2581 tttaatccct tcggttacaa tgcctttgcc gccgacctgt ggctgccgtg gaatttctcc
     2641 tttcccggcg atcagcgcgt ctggacactg accccaagct tcggcgtaat cgactgggtg
     2701 tactttgcgc ccgatccaag catcaatccc gcagtcgcgc agcacagcgt tgaatggcgg
     2761 gtcgcgcttg gtctcgacat cccgctcatc gaccagctgt acttgggggc gcgggtgcag
     2821 tacctgacga tcgtgtcgaa tttgtccgtg ttcaacatgc gcgatctgca ggtcagcgcc
     2881 gggccgacgc ttaaattctg aggggcagca tggaactgga aaagaccatc gcgctcctct
     2941 tggctggcac tgcgctgttc acgtcgccgg tcttcgccca ggaggtgggg accgcgactg
     3001 cggtcaaccc cgagagccag agcacgccgc ccggcggcag caccaccacg ctcaaggtcg
     3061 gcgcccgcgt cgtgcacaag gagcgcatca agaccacgcc gcagggatcc gtgcagcttc
     3121 tctttctcga ccgaagcacg ctcagcatcg cgccgaacag cgagatcgtg atcgacgaat
     3181 tcgtctacaa tccgggagcc ggcagcggcc acatggcggt gtcgctcgcc aagggcgctt
     3241 tgcggctggt cggcgggcag ttgagccatc agggggaggc atcggtcacg acttcaggcg
     3301 ccaccatcgg cattcgcggc ggcacctcca tcattaccct caccgaggcc atcaacatca
     3361 acgggctgct cacgctgggg aacggttgcc cgccggtgaa gcgtccaggc tggaagatca
     3421 cgctgccgtg cggcccgatc acgcaggcta cggcggccga gcttgcctat ttcatctcgc
     3481 tgttcggcgg caggttcggg gggaacggcg gcgtgccggg cctgaccaac gcgcagctca
     3541 acgcgctggg catcatcctc ccctggttcc ctccgcctcc aggcaccccg ccgccgaacg
     3601 ggaccgatcc taacaacacc atcatccaag ggacgcagca cggcgcggga accagtccgc
     3661 cgccgccgcc tccgccgcca cccccgccgc cgccatcccc gccgccctgt gttggtgact
     3721 gcttgggtac gagacgccag tagatcgcct tgcgcctcac cgctgcgccg cggcgatggc
     3781 gtggaagaag gctccggtga cgcggccgcg ccgcccgccg gccttttcgc gcctaccgtc
     3841 atcgctgtcg gtgacctccg cgaacggctc gtcggtgccc gcggacacga gcgcggcgta
     3901 gtggaactca tggccgcgca cgaccgtgcc gccgcggccg agaaggcagt ccgacaaaag
     3961 ccgcgcggtg cgatagccga gatgcagctt gggcttggcg aagctcgtcg catggctgag
     4021 caggccggtc atggcatgcc gccggccggc tttgtcttcg agactctcgc cgagcaccat
     4081 gtagccgccg cactcgccat gaaccggcca cgtctcggcg aaatagcgca atccggcgga
     4141 aaatctgtgc gcggcggcaa gggcgtcggc gtgcaattcc gggtagccgc cggggagcca
     4201 gcagctgtcg gcgcgcttcg gcggcggctc gtcggcgagc ggcgagaacg gcacgatttc
     4261 ggcgccggcc tggcgccagg cctcgagcag gtgcggatag acgaagctga aggcgcggtc
     4321 gctggcgaac gcgatgcgct ggcccggcgg cggcagcgcc gcggcggcgc tcgctgttgc
     4381 ggcgaacttg aacggcccgg cggcgccggc cagcgcgccg aggtcgatat ggcgctcggc
     4441 ggtggcggca agacgatcga tcagcgcgtc aagatcggga tgctcgtgcg cctgcacgag
     4501 gccgagatgc cgctcgggca gcgccagcgc cgcatcgcgg ggcagggcgc cgagcacggg
     4561 aacgcctaac gcggcaatgg cgtcggcgac gagcatgcgg tggcgttcgc cggcgacgcg
     4621 gttcaagatc acgccggcga cctgcaccgc cgcgtcgtgg gcggcaaagc cgcgcacgac
     4681 ggccgccgcc gactgcgcct gccccgccac gtcgatgagg aggacgaccg gcaggcggaa
     4741 atgcgcggcg
//
LOCUS       DATMQB010000309         2987 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1366835, whole genome shotgun sequence.
ACCESSION   DATMQB010000309 DATMQB010000000
VERSION     DATMQB010000309.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2987)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2987)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2987
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1366835"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(73..897)
                     /locus_tag="VNY79_08935"
     CDS             complement(73..897)
                     /locus_tag="VNY79_08935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009031152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HWX72612.1"
                     /translation="MRTALLPASLLAAALALPCAAPARASILVTIDKTTQRMSIAVDG
                     ATRYVWPVSTGRPGYDTPNGTFRPFRMEADHFSKEWDDAPMPHSVFFTKIGHAIHGSL
                     DTRHLGSAASHGCVRLSPEHASTLYALVQAEGLTDTTVVIAGHTPMATADAARRRAPV
                     EAAAGEPLDIAPGYDQQAGAYYGQQPAPYGAQPQPSYYGRPPQPYYGQQPQAYYGQPH
                     PYYAQRQYDGQPQPQTYDRQPPPAYRQLPASAQRGYALPAQPPPPQFFAPRPLLFN"
     gene            complement(1543..1785)
                     /locus_tag="VNY79_08940"
     CDS             complement(1543..1785)
                     /locus_tag="VNY79_08940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018409168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72613.1"
                     /translation="MTRTLLLGAALAFGLATAANAGIAPAPVGKTESLVSKVAEGCGR
                     GFWRGPNGRCHPMFDGRACPPGYHLGPERNRCWPNE"
     gene            complement(2178..2660)
                     /locus_tag="VNY79_08945"
     CDS             complement(2178..2660)
                     /locus_tag="VNY79_08945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007564327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF29 domain-containing protein"
                     /protein_id="HWX72614.1"
                     /translation="MAETKKEIVADLAPGDEPVRAEYEHDFYSWLMEQTRHLREGRFD
                     ALDRSNLAEEIESLGREQFNKLVNALRVLMAHMLKWDQQPSLRTRSWVLTIEEQRIEI
                     ADVLADNPALRPRIGEAVGRAYRRARIEAARETGLDEAQFPATCPYSFDDITTRIFSG
                     "
     gene            complement(2861..>2987)
                     /locus_tag="VNY79_08950"
     CDS             complement(2861..>2987)
                     /locus_tag="VNY79_08950"
                     /inference="COORDINATES: protein motif:HMM:NF044424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72615.1"
                     /translation="DRVFHQKFGNGNVTAIDGNKLTIQFDKAGEKRVVDSFVERV"
BASE COUNT          486 a          918 c         1022 g          561 t
ORIGIN      
        1 gcgagatcgt caggacgatg cggggcgtcg actccggcgc ggccctgcat cgcccggcgt
       61 gacggcgacc gctcagttga agaggagcgg gcgtggcgcg aagaactgcg gaggcggcgg
      121 ctgcgccggt agtgcgtatc cgcgctgtgc cgaggcgggg agttgcctgt aggccggcgg
      181 cggctggcgg tcataggtct gcggttgcgg ctgtccgtca tactgccgct gcgcgtaata
      241 ggggtgcggc tgcccgtaat aggcctgggg ctgttgtccg taatacggct gcggcggccg
      301 cccgtaatac gatggctgcg gctgcgcgcc gtacggcgcc ggctgctgcc cgtagtaggc
      361 cccggcctgc tggtcgtagc ccggcgcgat atccagcggc tcgccggcgg cggcttcgac
      421 cggcgcgcgg cggcgcgccg cgtccgctgt cgccatcggg gtgtggccgg caatcacgac
      481 cgtcgtatcg gtcaggcctt cagcctgcac cagcgcgtag agggtcgagg cgtgctccgg
      541 cgagagccgg acgcagccgt gggaggcggc gctgccgagg tgcctggtgt cgagcgagcc
      601 gtggatggca tggccgatct tggtgaagaa caccgaatgc ggcatcggcg cgtcgtccca
      661 ctccttggag aagtggtcgg cctccatacg gaacggccgg aaggtgccgt tcggcgtgtc
      721 gtagcccggc cgcccggtcg agaccggcca gacgtagcgg gtcgcgccgt cgaccgcgat
      781 cgacatgcgc tgcgtggtct tgtcgatggt gacgaggatg ctcgcgcgcg ctggcgcggc
      841 gcacggcagc gccagcgccg cggcgagcag cgaggcgggg aggagggcgg tacgcatgaa
      901 ctgaacacct gatggggtcg gcggcaggcc gccgtggggg ggacgtaagt ggaagtctca
      961 ctcgagcaat tggttcaaat caacaacgta atgtcgctgc ttggcggaaa ggtgaatgaa
     1021 atgcggcgag gcggcgtggt cttgcaccga tcgcgttcac gtttgcgtgg aagcttgtga
     1081 gacttcgtca ttccgggtgc cgccaacggg tccggcccaa ggtggccggc ccgatggcat
     1141 gctccatggc gagcccggaa tccataaccg ccccctgtga gtatggattc cggactcgcg
     1201 ggctggcgcc agcgctccgg aatgacgcgc cgcctgagcc taatgccgct tgaaatactg
     1261 caccgcgcgc tcgtgcttct ccgccgccgc gcgtggcgaa cgtgccgaga ttgcgccgcc
     1321 ggccggtctt cggattcttc ttgcgggaat agagccggta ttggccggaa gtaagcttgc
     1381 ggatcatggc gtcttcattg tgcaaggcta tcgcttgaac aagtagcgac gcgactgccg
     1441 gttcgggctc gcttcctcgg tagcccctcg cggagcggcc ataaaatgaa agcggccgaa
     1501 cccttggccc ggccgccccg ttcgatggaa gtcttacgtc ccttactcgt tgggccagca
     1561 gcgattgcgc tccgggccca gatggtagcc gggtgggcac gcgcggccgt cgaacatcgg
     1621 atggcacctg ccgttcggcc cgcgccagaa gccccggccg catccttccg cgaccttgct
     1681 caccaggctc tcggttttgc ctacaggggc gggggcgatg ccggcgttgg ccgcggtagc
     1741 gagaccgaat gccagcgcgg cacccagcaa gagtgtcctc gtcattcttt gctccttgtg
     1801 catggatttt ggaaacgatt cccgaaaacg gcgcgggaaa ttcaccgcga ccgtttcatt
     1861 cgaacgcgaa agactatcgc gtcgccgccc ctcacaatgg catggcagat aggcgctgac
     1921 cgcggcctga ataatcaggt catgggccgt tcatattccg tgcgcttcgc gcggcggaca
     1981 gaggcggcat tttggcggaa gcgatcttgc cggcatggcg gacgcgccat tcgtcattcc
     2041 gggggggccg cgcaaagcgc ggagcccgga atccctattc gccgaccttt gactggggat
     2101 tcccggcttg ccgtggagcc tttcatcggc cggcggcatc gggccggacc cattgtcggc
     2161 aatccggaat gacgggccta tcccgaaaag atgcgcgtgg tgatgtcgtc gaacgaatag
     2221 gggcacgtcg ctgggaattg tgcctcatcc agcccagttt cccgcgccgc ctcgatgcgc
     2281 gcgcgacggt aggcgcggcc aacggcctcg ccgatccgcg gtcgcagcgc cggattgtcg
     2341 gcgagcacgt cggcgatttc gatacgctgc tcttcgatcg tgagcaccca actgcgcgtg
     2401 cgcagcgacg gctgctggtc ccatttcagc atgtgtgcca tcagcacgcg cagcgcgttg
     2461 acgagcttgt tgaattgctc gcgccccaac gattcgatct cctcggcaag attgctgcga
     2521 tcgagcgcat cgaagcggcc ttcgcgaaga tgccgcgtct gctccataag ccaggaataa
     2581 aagtcgtgct cgtactccgc gcgcaccggc tcgtcgccgg gcgcgagatc ggcaactatt
     2641 tcttttttgg tttcggccat gactcgtttc ccttcagggt agtaccacac tttcgctgcc
     2701 gggcgggaaa atccgcccta cgcgctaccg aggaggcaaa ttctattgcg aaagaatggt
     2761 gttctcttga attttctgga agcgaagctt gaacggtcca aggacaattt cgtctcccga
     2821 tttgaggaga tatggagtgg aaataggccc aaggcgcctc tcacacccgc tccacaaaac
     2881 tatccaccac gcgcttctcg ccggccttgt cgaactgaat cgtcagcttg ttgccgtcga
     2941 tggcggtgac gttgccgttg ccgaatttct ggtggaagac gcggtcg
//
LOCUS       DATMQB010000310         4049 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3532109, whole genome shotgun sequence.
ACCESSION   DATMQB010000310 DATMQB010000000
VERSION     DATMQB010000310.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4049)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4049)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4049
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3532109"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..227
                     /locus_tag="VNY79_08955"
     CDS             <1..227
                     /locus_tag="VNY79_08955"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72616.1"
                     /translation="ETKMERRTGCLQANVEFLQQALNKLARETQDKIAAAGRDLAAAR
                     AETAALRTTVEKLSSELAQMKAKAEPAAKK"
     gene            363..887
                     /locus_tag="VNY79_08960"
     CDS             363..887
                     /locus_tag="VNY79_08960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HWX72617.1"
                     /translation="MRRLMLLRHAKTERAEPGERDRDRKLTKRGRTDAPLIGAYMAHH
                     GLVPDVALVSPATRAEETWALVAKVLPKAPRIVKEEGIYNAGRDKLMGIIRKARDAQV
                     LLVVGHNPGLHELAVSLIASGDVEARERVSEKLPTSGLVVIDLPFDDWSRVHPSAGRL
                     ERFVSPRLIEEAAD"
     gene            complement(1033..2214)
                     /locus_tag="VNY79_08965"
     CDS             complement(1033..2214)
                     /locus_tag="VNY79_08965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008133514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX72618.1"
                     /translation="MAALAGAAFVLSAPMALAQVKTTNQGITDTEIAVGTHQDLSGPI
                     KTWGVSVANGMKMATEEVNAAGGINGRKIRLIIEDSGYDPKRAVLDTQKLIEKDQVFS
                     MIGAMGSPTVLAAQDIVLDAGVTQLFPLTAAQFTFKLDPAKPQDRLKFNNLPPYIEST
                     RAAMKYMVELKHPKKPCIMFQDDEYGKNVLDGFTQQLAAMKIEPGTQTSYKRGATDFS
                     AQIARMKADGCDLVLLGTVIRETIGAMTEAKKLGWTVDFLGATPTDVIEVPLLGKDVV
                     EGLYAAGGIEIPYEDTAKGKVKDWLINYKKMFGVDANTQAIIGYDAIQTFAFYASMAG
                     KDLTGQKLLAALESGKEFHSMFGSPPAKFSPTNHLASTAIQVQQVQNGRWKVLQEGLE
                     Y"
     gene            complement(2322..>4049)
                     /locus_tag="VNY79_08970"
     CDS             complement(2322..>4049)
                     /locus_tag="VNY79_08970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-dependent synthetase/ligase"
                     /protein_id="HWX72619.1"
                     /translation="WKTITWNEWLERTKEIAFALDGLGFRPGDVASVLANTVPEWCYA
                     DLGVLCAGGVCSGIYPTDSAKQVAYLVNDSRTRVLFVEDDEQLDKALEARAHCPMLER
                     IVVFDMEGLAKFSDPMCVSFASFLAEGRARIAGREDRWEEMIASRGPDDLALLVYTSG
                     TTGPPKGVMLSHRNVVTQMRHATDVLSYTAHEERLAFLPMCHVAERVAGCYYGIAIGV
                     VANYAESPETVLENVRELQPTSLGAVPRVWERLYSATMIALKDGTALERWAYRLAIAA
                     GYRVADARLERRAPTLLERIGFALAYRLVLRNIRIMMGIDRCHWLWTGAAPIAPDLIR
                     WYLALGMNMYEVYGQTENTGLATVMPADGIKLGTVGKVVPYGEVMVSPEGEILIRGDF
                     VCMGYLNQPLRTAETIDRERWLHTGDVGLIDNEGYVRITDRMKDIIITAGGKNITPSE
                     IENQLKFSPYISDAVVVGDRRPYLTCLVMIDQENVEKFAQDRAVPFTNYASLCRAQEV
                     QDLIWGEIEKVNADFARVETIKRFYLIEQQLTPEDDELTPTMKLKRKFVNEKYQKEIE
                     VMYRSASAA"
BASE COUNT          693 a         1310 c         1303 g          743 t
ORIGIN      
        1 ccgaaacgaa gatggagcgt cgtaccggct gcctgcaggc gaacgtcgag tttctgcaac
       61 aggcactgaa caagctcgcc cgcgaaacgc aggacaagat tgccgccgcc ggccgcgatc
      121 tcgctgccgc ccgagccgag actgcggcgc ttcgaacgac ggtggagaag ctcagcagcg
      181 aactcgcgca aatgaaagcg aaagccgaac cggccgccaa gaagtagcgg cccaacgccc
      241 gtcgacatcg cgaaaaacct gtcgggtccc gctttcgcgc ggacgagccc atgagtgcag
      301 ccgtggtcga tctcggccaa agttgcttta tactgtggcg gtgaaacagt gacattcccg
      361 tcatgcgccg attgatgctg ctgcgccacg ccaagactga gcgcgccgaa cccggcgagc
      421 gcgaccgcga ccgcaagctg accaagcgcg gccgcaccga cgcgccgctc atcggcgcct
      481 acatggccca ccacggcctc gtgccggacg ttgcgctcgt ctcgccggcg acccgcgcgg
      541 aggaaacctg ggcgcttgtc gccaaggtcc tgcccaaggc gccgcggatc gtaaaggagg
      601 agggcatcta caacgccggc cgcgacaagc tcatgggcat cattcgcaag gcgcgggatg
      661 cacaggtgct gctcgtcgtc ggccataatc caggcctgca cgagcttgcg gtgagcctga
      721 tcgcctccgg tgatgtggag gcgcgcgagc gtgtcagcga aaagctgccg acgtccggcc
      781 tcgtcgtcat cgatctgccg ttcgacgact ggtcccgcgt gcatccgagc gcgggcaggc
      841 tcgagcgctt cgtcagccca cgcctgatcg aagaggcagc cgattgaaca gagaggcgcg
      901 aagtcccgcc tccccgaaaa cgcgcggagc acatcccgat cctttggcga tcgcgacatg
      961 ccccggcagt gactgcaaaa gtcgctttgc cggatggccc gagactgtgg ccgatcccgg
     1021 cggtacgctc gttcagtact ccagcccctc ctgcaggacc ttccagcggc cgttctggac
     1081 ctgctggacc tggatcgcgg tgctggcaag atggttggtc ggcgagaact tcgccggcgg
     1141 cgagccgaac atgctgtgga actccttgcc ggactcgagc gcggctagaa gtttttgtcc
     1201 ggtcaagtcc ttgccggcca tactggcgta gaaggcgaag gtctggatgg cgtcgtagcc
     1261 gatgatcgcc tgggtgttgg cgtcgacgcc gaacatcttc ttgtagttta tgagccagtc
     1321 cttgaccttg cccttggcgg tatcttcgta gggaatttca atgccgccgg cggcgtaaag
     1381 gccttcgaca acgtccttgc cgagcagcgg cacctcgatc acgtcggtcg gcgtggcgcc
     1441 gaggaaatcg acggtccagc cgagcttctt cgcttcggtc atggcgccga tggtctcgcg
     1501 gatgaccgtg ccgagcagca ccaggtcgca gccgtccgcc ttcattcgcg cgatctgggc
     1561 gctgaagtcg gtggcgccac gcttgtagct cgtctgcgtt ccgggctcga tcttcatcgc
     1621 ggcgagctgt tgcgtgaagc cgtcaagcac gttcttgccg tactcgtcgt cctgaaacat
     1681 gatgcacggc ttcttcgggt gcttcagctc caccatgtat ttcatcgccg cccgcgtcga
     1741 ctcgatgtag ggcggcaggt tgttgaactt cagccgatcc tgcggcttcg ccggatcgag
     1801 cttgaaggtg aactgggcgg cggtgagcgg aaagagctgg gtcacgccgg cgtcaagcac
     1861 gatgtcctgc gcggcgagca ccgtcggcga gcccatcgcg ccgatcatcg agaagacctg
     1921 atccttctcg atgagtttct gcgtgtcgag cacggcgcgc ttgggatcat agccgctgtc
     1981 ctcgatgatc aaccggatct tgcggccgtt gatgccgccg gcggcgttga cctcctcggt
     2041 ggccattttc atgccgttgg cgaccgagac gccccacgtc ttgatcggcc ccgaaaggtc
     2101 ctggtgggtg ccgaccgcga tctcggtgtc ggtgatcccc tggttcgtgg tcttgacctg
     2161 cgccagcgcc atcggcgcgc tcagaacgaa cgcggcgccg gcgagcgccg ccatgccttc
     2221 acggaatctc atttgttttt cctccctgcg cgtgttcccc tgcccgcctt tcatgctatc
     2281 gcagccgccg ggcaccgtca aagaacgctc cagcaaacgg gttaagcggc cgaggcgctg
     2341 cgatacatga cctcgatctc tttctggtac ttctcgttga cgaatttgcg cttgagcttc
     2401 atcgtcggcg tcaactcgtc gtcctccggc gtgagctgct gctcgatgag gtagaagcgc
     2461 ttgatggttt cgacccgggc gaagtcggca ttgaccttct cgatctcgcc ccagatcagg
     2521 tcctgcacct cctgcgcgcg gcacaggctc gcatagttgg tgaacggcac cgcccggtcc
     2581 tgggcgaatt tctcgacgtt ctcctgatcg atcatgacca ggcaggtcag atacgggcgc
     2641 cggtcgccaa caacgaccgc gtcgctgatg tagggcgaga atttgagctg gttttcaatc
     2701 tccgacgggg tgatgttctt gccgccggcg gtgatgatga tgtccttcat gcggtcggtg
     2761 atgcgcacgt agccctcgtt gtcgatcagg ccgacgtcgc cagtgtgcag ccagcgctcg
     2821 cgatcgatcg tctccgccgt gcgcagcggc tggttgagat agcccatgca gacgaagtcg
     2881 ccgcggatga ggatctcgcc ctccggcgag accatcactt cgccataggg gaccactttg
     2941 ccgacagtgc cgagcttgat gccgtccgcc ggcatcaccg tcgcgagccc ggtgttctcg
     3001 gtctggccat agacctcgta catgttcatg ccgagcgcga gataccagcg gatgaggtcg
     3061 ggcgcgatcg gcgccgcgcc ggtccacagc cagtggcagc ggtcgatgcc catcatgatg
     3121 cggatgttgc gcagcacgag ccggtacgcg agcgcaaagc cgatgcgttc caacaatgtc
     3181 ggcgcgcgcc gctccagccg ggcatcagcg acgcggtagc ccgccgcgat cgccaagcgg
     3241 taggcccagc gctccagcgc cgtcccgtcc ttgagcgcga tcatggtcgc ggaatagagc
     3301 cgctcccaca cccgcggcac cgcgccgagc gacgtcggct gcagctcgcg gacattctcc
     3361 agcaccgtct cgggactttc cgcatagttg gcgacgacgc cgatcgcgat gccgtagtag
     3421 cagcccgcga cgcgctcggc gacgtggcac atcggcagga aggccagacg ttcttcgtgc
     3481 gccgtataag acagcacgtc ggtggcgtgc cgcatctggg tgacgacgtt gcggtggctg
     3541 agcatcacgc ccttgggcgg accggtcgtg cccgaggtgt agaccaggag cgcaaggtca
     3601 tccgggccgc gggaggcgat catctcctcc cagcggtcct cgcgcccggc aatgcgcgcg
     3661 cggccttcgg ccaggaaaga ggcgaaggag acgcacatcg ggtcggaaaa cttcgccagc
     3721 ccttccatgt cgaagaccac gatgcgctcg agcatcgggc aatgagcgcg cgcctccagc
     3781 gccttgtcga gctgctcgtc gtcctcgacg aacagcacgc gggtgcgtga atcgttgacc
     3841 aggtaggcga cctgcttggc tgaatcggtc ggatagattc cggagcagac gccgccggca
     3901 cagagcaccc cgaggtcggc gtagcaccat tccggcaccg tattggcgag aaccgaagcg
     3961 acgtcgccgg ggcggaagcc gagcccgtcg agggcgaagg cgatctcctt ggtgcgctcg
     4021 agccattcgt tccaggtgat ggtcttcca
//
LOCUS       DATMQB010000311         8920 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2918246, whole genome shotgun sequence.
ACCESSION   DATMQB010000311 DATMQB010000000
VERSION     DATMQB010000311.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8920)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8920)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8920
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2918246"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..389)
                     /locus_tag="VNY79_08975"
     CDS             complement(<1..389)
                     /locus_tag="VNY79_08975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HWX72620.1"
                     /translation="MSATAEATTPHPAEPWRRRLLRSLLYGSNIDRAAKARARVGLAI
                     LVFAAVYCVIAARLVMFAVIPDSRAARHGPSGDAIATARPDILDRRGEVLATDVRVPS
                     LYGEPRHIIDVDEAVELLTAELPDLDSA"
     gene            complement(393..833)
                     /locus_tag="VNY79_08980"
     CDS             complement(393..833)
                     /locus_tag="VNY79_08980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72621.1"
                     /translation="MIFRVLNLVVIGALVLAAAYVYRIKFDATVQAERLAKIRSEVRH
                     ERDTIAALRAEWGELDNPGRIEALTKRYLQLKPTAPTQFGSFEQLPDHPPQFLMPGVA
                     DPIGVMIENLEEPETVTGSVPAPDAAGEAGEGEAGAPAAATPDQ"
     gene            complement(830..1861)
                     /gene="rsmH"
                     /locus_tag="VNY79_08985"
     CDS             complement(830..1861)
                     /gene="rsmH"
                     /locus_tag="VNY79_08985"
                     /EC_number="2.1.1.199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016434 - rRNA (cytosine)
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HWX72622.1"
                     /translation="MTGSDSAAVAGGLARHLPVLARPAVGWLGVRSGGVYVDATFGAG
                     GYTRAILATPGARVIGIDCDPAAVAAGPAVAAEARDRLLLFEERFSNLATILSRADVS
                     AADGVVFDLGVSSMQLDAPGRGFSFRFEGPLDMRMGREGPSAADVVAHASERDLAAII
                     ATLGEERHARAVARAIVRARQERPIATTRALADLVGGVVHARAGAIHPATRTFQALRI
                     FVNDELAELAHGLAAAERVLRPGGRLVVVAFHSLEDRMVKNFFAERSRPPAGSRHLPE
                     IPPAPTTFRVLTRRPQTPDDAELAANPRARSAKLRAGERTDAAPRAAPIAPLLPHLPS
                     LADVVRGQL"
     gene            complement(1861..2340)
                     /locus_tag="VNY79_08990"
     CDS             complement(1861..2340)
                     /locus_tag="VNY79_08990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HWX72623.1"
                     /translation="MDRFVSHYMLRLDAKGRVSVPASFRAVLARDGFDGVYCYPALDR
                     PALDAGGNALLAEIEALVAGLSPYSEQRERFSLALYGTSETLKVDGEGRVVITDVLKT
                     HAGIADAVAFVGLGHKFQIWEPGRFRAELAEATEKVRAYKQELGARMAGAKPLGARE"
     gene            2798..3616
                     /locus_tag="VNY79_08995"
     CDS             2798..3616
                     /locus_tag="VNY79_08995"
                     /EC_number="3.5.1.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018640946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008745 - N-acetylmuramoyl-L-alanine
                     amidase activity [Evidence IEA];
                     GO_process: GO:0071555 - cell wall organization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HWX72624.1"
                     /translation="MARTAFPADSSVVADVRPSPNHSERVGNQRPNMIVLHYTGMPSA
                     NAALDLLCSGGSQVSAHYFVFEDGRIVQMVPESRRAWHAGSAFWAGETDINSCSIGIE
                     IANPGHEHGYLDFPKRQIAATTALCRSILTRNTVPPVRVLAHSDIAPARKQDPGERFP
                     WRTLYDSGVGHWVRPAPIKENSVLVALGDSGEAVTAFQEMLAEYGYGIATSGIYDSAT
                     HAVVTAFQRHFRPERADGVCDESTRATLQNLIATRGRVRTIASRGRNAENLPAS"
     gene            3649..4069
                     /gene="rnpB"
                     /locus_tag="VNY79_09000"
     ncRNA           3649..4069
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="VNY79_09000"
                     /product="RNase P RNA component class A"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00010"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00010"
     gene            complement(4249..4560)
                     /locus_tag="VNY79_09005"
     CDS             complement(4249..4560)
                     /locus_tag="VNY79_09005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72625.1"
                     /translation="MLDLTSAKAGRLLSGTKTDIEQRKAIAGRADDNIPRITSLKSMI
                     EQRADHYGEVFFQSCRQDRRRPEVFARRGVLDQAKQRKRDRSRRKARRQRERGEGSAS
                     G"
     gene            4790..5806
                     /locus_tag="VNY79_09010"
     CDS             4790..5806
                     /locus_tag="VNY79_09010"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013161.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PDR/VanB family oxidoreductase"
                     /protein_id="HWX72626.1"
                     /translation="MNTVIVPSPAAGAPASDAARAGGLIDVRLTDITVVARDTNLYAF
                     ARPSGGALPPYKPGAHIDIHIPNGLVRQFSLLNPADNPETYVVGIKRDAQSRGGSRYI
                     FDEMRVGHTVKISAPRNNFPLVENAEHVVLVAGGIGITPIWCMAQQLAAQNRSWKLYY
                     SCRSRADMAFLDTLEKFGPQSSHLHFDDEADGKFLDLAAVFASAPQNTHFYCCGPNPM
                     LKAFEAAAAARPRSNVHVEYFTPKEEAAAGTLGGFWVELARSGEEYFIPEGRKILEVL
                     YEAGIDVDYSCELGICGECVTRVISGIPEHHDSVLSEEEQAANDKAMICCAGCKSERL
                     VLDM"
     gene            5877..6029
                     /locus_tag="VNY79_09015"
     CDS             5877..6029
                     /locus_tag="VNY79_09015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aa3-type cytochrome c oxidase subunit IV"
                     /protein_id="HWX72627.1"
                     /translation="MADHGEVEYATATGNDYAEHEQMYRSFVALVKWSIGVIVVILIL
                     MAFFLV"
     gene            6132..7265
                     /locus_tag="VNY79_09020"
     CDS             6132..7265
                     /locus_tag="VNY79_09020"
                     /EC_number="1.6.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008746 - NAD(P)+ transhydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Re/Si-specific NAD(P)(+) transhydrogenase
                     subunit alpha"
                     /protein_id="HWX72628.1"
                     /translation="MKVAVAAETEAGEPRVAATPETVKKLIGLGAEVAVEPGAGIKSG
                     ILDADYAAAGAAVSPAAVEGADVVLKVRRPQAAELSRYKKGAMVVAIMDPYGNEAALR
                     AMANAGIVGFAMELLPRITRAQGMDVLSSQANLAGYRAVIDAAAEYGRALPMMMTAAG
                     TVPATRVFVMGAGVAGLQAIATARRLGAIVTATDVRPAAKEQVESLGAKFIAVEDDEF
                     RAAETAGGYAKEMSKEYQAKQAALVAEHIKKQDIVITTALIPGRPAPRLISKEMVASM
                     RPGSVIVDLAVERGGNVEGVAADAVANVGGVKIVGYSNVPGRLAATASSLYAKNLYAF
                     LEILIDKKTKALAVNWDDDIVKATALTRDGAIVHPNFKPKSAA"
     gene            7516..7839
                     /locus_tag="VNY79_09025"
     CDS             7516..7839
                     /locus_tag="VNY79_09025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proton-translocating transhydrogenase family
                     protein"
                     /protein_id="HWX72629.1"
                     /translation="MHAVADAVDPFVFRLSIFVLAVFVGYYVVWSVTPALHTPLMSVT
                     NAISSVIVVGALLAVGVGLIANDAGPIWARAFGFVALILASVNIFGGFLVTQRMLGMF
                     QRKQK"
     gene            7874..>8920
                     /locus_tag="VNY79_09030"
     CDS             7874..>8920
                     /locus_tag="VNY79_09030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007614228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)(+) transhydrogenase (Re/Si-specific)
                     subunit beta"
                     /protein_id="HWX72630.1"
                     /translation="MSANLTALAYLVAGVLFILALRGLSNPETSRRGNLFGVIGMAVA
                     VATTLAAHPPVGFAAWVLVVVGVALGGGAGAMIARRVPMTSMPELVAAFHSLVGMAAV
                     LVAAGAFYAPAAFDIGAAGAIHGQSLIEMSLGLAIGAVTFTGSVIAFLKLSARMSGKP
                     IILPGRHVINIALGLALVALVVWFFASQHHLAFWLIAAVSFLLGVLIIIPIGGADMPV
                     VISMLNSYSGWAAAGIGFTLGNSALIITGALVGSSGAILSYIMCKGMNRSFISVILGG
                     FGGEVAGPSGAADNRPVKLGSAEDAAYLLKNSSRVIIVPGYGMAVAQAQHALREMADK
                     LKAEGVEVKYAIHPV"
BASE COUNT         1452 a         3023 c         3006 g         1439 t
ORIGIN      
        1 gcggagtcga gatcgggcag ttcggcggtg agcagctcga ccgcctcgtc gacatcgatg
       61 atgtgacgcg gctcgccgta gagcgagggc acgcgcacgt cggtggccag cacttcgccg
      121 cggcggtcga ggatgtcggg acgcgccgtg gcaatcgcgt cgccggaggg gccgtgccgc
      181 gccgcccggc tgtcggggat gaccgcgaac atgacgagcc gcgcggcaat gacgcagtag
      241 accgccgcga aaacgaggat cgccaggccg acccgcgccc gcgccttggc cgcgcgatcg
      301 atgttgctgc catagagcag gctgcgcagc agccgccggc gccagggctc ggcgggatgc
      361 ggggttgtcg cttccgcggt cgcgctcatc gcctattgat ccggtgttgc ggcggccggt
      421 gcccccgcct cgccttcgcc cgcttcaccc gccgcgtcag gcgccggaac gcttccagtg
      481 accgtttccg gctcctccaa attctcgatc atgacgccga tcggatcggc gacgccgggc
      541 atcaggaatt gcggcgggtg gtcgggaagc tgctcgaatg agccgaattg tgtcggcgcc
      601 gtcggcttga gctgaaggta gcgcttggtg agcgcttcaa tgcgcccggg gttgtcgagc
      661 tcgccccatt cggcgcgcaa ggccgcgatg gtgtcgcgct cgtggcggac ctcactgcga
      721 atcttggcga ggcgctcggc ctgcaccgtg gcgtcgaatt tgatgcgata gacatacgca
      781 gccgcgagca cgagcgcgcc gatcacgacc aggttcagga cgcggaagat catagctgcc
      841 cccggacgac gtcggcgagc gacggcaggt gcggaagcaa aggcgcgatc ggcgcggcgc
      901 gcggcgccgc gtcggtgcgc tcgccggccc ggagctttgc cgaacgggcg cgcgggttgg
      961 cggcgagctc ggcgtcgtcg ggcgtttgcg gccgccgcgt gagcacgcgg aaggttgttg
     1021 gcgccggcgg aatctccggc agatggcgcg aaccggccgg cggacggctg cgttcagcga
     1081 agaaattctt gaccatgcga tcttcaagcg agtggaaggc gaccacgacc aggcgccctc
     1141 cgggtctgag cacgcgctcg gcggcggcga gcccgtgcgc caattcggcg agctcgtcgt
     1201 tgacgaagat acgcaaggcc tggaacgtgc gcgtggccgg atggatcgcg cccgcgcgcg
     1261 cgtgcacgac gccgccaacc agatcggcga gcgcccgcgt ggtggcgatt gggcgctcct
     1321 gccgcgccct gacgatggcg cgcgccaccg cccgcgcgtg acgctcctcg ccgagcgtcg
     1381 cgatgatggc ggcaaggtca cgctcgctgg cgtgcgcgac gacgtcggcg gcgctcggac
     1441 cctcgcgtcc catgcgcatg tcgagcgggc cttcgaaacg gaacgaaaat ccccgtccgg
     1501 gcgcgtcgag ctgcatcgac gaaacgccga gatcgaacac gacgccgtcg gccgcagaga
     1561 cgtcggcgcg agacagtatc gttgcgaggt tggagaagcg ttcctcgaag aggagcagcc
     1621 gatccctcgc ttccgcggcg acggccgggc ctgcggcgac cgcggcggga tcacagtcga
     1681 tgccgatcac ccgcgcgccc ggcgtcgcca ggatggcgcg cgtgtagccg ccggcgccga
     1741 acgtcgcgtc gacgtagacg ccgccagagc ggacaccgag ccaccccacc gcggggcggg
     1801 cgagcacggg aaggtgacga gccagtccgc cagcgacagc cgcgctgtcg ctgcccgtca
     1861 tcattcccgt gctccgagcg gctttgcccc cgccatccgg gcccccagtt cctgcttgta
     1921 agcacggacc ttctcggtgg cctccgcgag ttccgcgcga aagcggccgg gctcccagat
     1981 ctgaaatttg tggccgagac cgacgaaggc gacggcgtcc gcgatcccgg catgcgtctt
     2041 gagcacgtcg gtgatcacca cgcggccttc gccgtcgacc ttcagcgtct cgctcgtgcc
     2101 atagagcgcc agcgaaaagc gctcgcgctg ctcggaatag ggcgacaggc cagcaaccag
     2161 cgcctcgatc tccgcgagca aggcgttgcc gccggcatcg agtgccgggc gatcgagcgc
     2221 cggatagcaa tagacgccat cgaagccatc gcgggcgagc actgcgcgaa atgaagccgg
     2281 caccgaaacg cgccccttgg catcgaggcg gagcatgtaa tgggacacga accggtccat
     2341 ctcgcccttc gccgaacggc gaaccccatg ggcccggccg cttcaaccgg caaatctcct
     2401 ccgaacctgc cccggggccg ctaccggcgg ctgaaccgga tgacccgctg gttgggagaa
     2461 tatgggttat catggggctg tatgggcgtc aacggatcga ctctgccgca acacggcgtt
     2521 cgcaggccga ttagcaagcg gtaagcttaa ggaatggttg aggtcgcgcc tgcggattgg
     2581 ggtgcggatt gccagcttgc gagtgtatag agtgcggagc tctcagccgt gcggcttcgc
     2641 gcgtcgatga tcggatgcct cacttcgccg cgtcgggaac gcgcgcgcga gccgatgcgt
     2701 tgcctgcggg caacgagagg ggtctttatt gcgcggcgaa tcgttcgcct gcgtaaatcg
     2761 gcttgtcggc aacaacgttc gctctagagt caatgacatg gcccgcactg catttcccgc
     2821 cgattcctcc gtcgtggccg acgtccgccc ctcgccgaat cacagcgagc gcgtcggcaa
     2881 ccagcgcccg aacatgatcg tgctccacta cacgggcatg cccagtgcca acgccgcgct
     2941 cgacctcttg tgctcgggcg ggagccaggt ctcggcccac tacttcgtct tcgaagacgg
     3001 caggatcgtc caaatggtgc cggaaagccg gcgcgcctgg catgcgggct ccgcattctg
     3061 ggccggcgag accgacatca attcgtgctc gatcggcatc gagatcgcca atcctggcca
     3121 cgaacacggc tatctcgact ttcccaagcg ccagatcgcg gcgacgacag cgctttgccg
     3181 cagcatcctc acgcgcaaca ccgttccgcc ggtgcgtgtg ctcgcccatt ccgacatcgc
     3241 gccggcgcgc aagcaggacc ccggcgaaag attcccctgg cgcacgcttt atgattcggg
     3301 cgtcgggcac tgggtcaggc cggcgccgat caaagagaac agcgtgctgg tcgcgctcgg
     3361 cgacagcggc gaggcggtga ccgcgttcca ggagatgctc gccgagtacg gctacggcat
     3421 cgctaccagc ggcatctacg attccgccac ccatgccgtc gtcacggcgt tccaacgcca
     3481 tttccgcccg gagcgcgccg acggcgtctg cgatgagtcg acgcgggcga cgctgcagaa
     3541 tctgattgcc acgcgcggcc gggtccgcac catcgcgtcg cgcggccgca atgccgagaa
     3601 cctccccgcc tcttgacgaa aagggcctgc ccccccatcc cttccctgtc agtcggccgg
     3661 acggccgctc cggcgaagcc gaaaggctgc cggggaggaa agtccgggct ccgtggacaa
     3721 gcggtgccgg ataacatccg gcgggcgcga gcctagggaa agtgccacag agaacagacc
     3781 gccgcgggtg ttgcgtatgc cgcggcaagg gtgaaacggt gcggtaagag cgcaccgcgc
     3841 cggcggcaac gccggcggca cggcaaaccc caccgggagc aagaccgaat agggacggcg
     3901 tgccgcctcc cgcgcgcaag cgcgaatgcg gctggatcga tgtctagatc cgcccgtccg
     3961 ggtaggttgc tggaggcgcc gggcaaccgg cgtcctagag gaatggccgt cgcgcatgcg
     4021 ggcttgcctg catgccatcc agaacccggc ttacaggctg gctgacgctg cttacgggcg
     4081 cccggcggaa accccggcgg gcgcccgcca catttaaggg acttccgcgc gtgccctgct
     4141 actgcggcgg ggcaatcgga gggtcgaaat ggaaggtcgt gtccttacct tccgtggagg
     4201 gaaatccgat cgtgccgcga tgcgcctcca tgatcgccgg cgcgatgctc agcccgaggc
     4261 cgacccctcc cctcgctcgc gttgacgacg agccttcctg cgtgaacggt cgcgcttgcg
     4321 ttgcttggcc tggtcgagga cgccgcgccg agcaaagact tcggggcggc ggcgatcttg
     4381 acgacatgac tgaaagaaca cctcgccgta atggtccgcc cgctgttcga tcatcgactt
     4441 caaggaagtg atgcgtggaa tattgtcgtc ggcccggccg gctatcgcct ttcgctgctc
     4501 gatgtccgtc ttggtgcccg acagcagccg gcccgccttc gcggaggtca ggtcaagcat
     4561 ggatgctctc cccgcttgcg gcgcgccgcg ctactagcat caagccgtta gtgacgacgc
     4621 gtgggataca aatggcggta cggcgccgat gcgctgcaag gccgggcgcg gcgccgatca
     4681 ccggaccatt gcacatatcc ccgctggctt ggcggtggcc tcgcgcggag gccaaaggcc
     4741 gccaaggaat gtgttgcgaa accccgccca ggccgcctat ttaagccgca tgaacacggt
     4801 aattgttcca tcgcccgcgg ccggggcacc ggcgtccgac gcggcccgcg ccggcgggct
     4861 gatcgacgtg cggctgaccg acataacggt cgtcgcccgc gataccaatc tgtacgcgtt
     4921 tgcccgcccg agcggcggcg cgttgccgcc ctacaagccg ggcgcgcaca tcgatattca
     4981 catccccaac gggctcgtcc gccaattctc gctgctcaat ccggccgaca atcccgaaac
     5041 ctatgtcgtc ggcatcaagc gcgatgcgca aagccgcggc ggctcgcgct acatcttcga
     5101 cgagatgcgc gtcgggcaca cggttaagat cagcgcgccg cgcaacaact tcccgctcgt
     5161 cgagaacgcc gagcacgtcg tcctggtcgc cggcggcatc ggcatcaccc caatctggtg
     5221 catggcgcag cagctcgccg cgcagaaccg ttcctggaag ctttactatt cgtgccgctc
     5281 gcgcgccgac atggcgtttc tcgacacgct ggagaaattc gggccgcaat ccagccacct
     5341 gcatttcgac gacgaagccg acggcaagtt cctcgacctg gcggcggtct tcgcgtcggc
     5401 gccgcagaat acgcactttt attgctgcgg ccccaatccg atgctcaagg cgttcgaggc
     5461 cgcggccgcc gcgcggccgc gcagcaacgt tcacgtcgaa tatttcacgc cgaaggaaga
     5521 ggcggcggcg gggacgctcg gcggcttctg ggtcgagctg gcgcgctccg gcgaggagta
     5581 tttcatcccc gagggcagga agattctcga agtgctctac gaggccggca tcgacgtcga
     5641 ctattcctgt gaactcggca tctgcggcga atgcgtcacg cgcgtgatct ccggcattcc
     5701 cgagcaccac gattcggtgc tgagcgagga ggagcaggcc gccaacgaca aagccatgat
     5761 ctgctgcgcg ggctgcaaga gcgaacgcct ggtgctggac atgtaggcat cgcgttgctc
     5821 cgggcgcgca attacgctaa gccccgtccg cgagggcgac gttttggagg gatgcgatgg
     5881 ccgaccacgg cgaggtcgaa tacgcaacgg cgaccggaaa cgattatgcc gagcacgagc
     5941 agatgtaccg ctcattcgtc gccttggtga agtggagcat cggtgtcatc gtcgtcattc
     6001 tcatcctgat ggcgtttttc ctcgtctgag ctcgaccgcc ctgtcgcacg ctgccggtga
     6061 gggccggcgc gaagccgcga gcgtgcgggt ttgaaagccg gccgcgcacg caggccgccg
     6121 tcggaggcac tatgaaggtt gcggttgctg cggaaaccga ggcgggcgag ccgcgggttg
     6181 ccgccacgcc ggagacggtc aagaaactga tcggcctcgg cgccgaggtc gcggtcgagc
     6241 cgggcgctgg aatcaagtcg ggcatcctcg acgcggacta tgccgccgcc ggggccgccg
     6301 ttagtcccgc ggcggtcgag ggtgccgacg tcgtgctcaa ggtgcgccgt ccgcaagccg
     6361 ccgagctgtc gcgctacaag aagggcgcga tggtcgtcgc catcatggat ccctacggca
     6421 acgaggccgc gctgcgcgcc atggccaacg ccggcatcgt cggcttcgcg atggagctcc
     6481 tgccgcgcat cacccgcgcg caaggcatgg acgtgctgtc gagccaggcc aatcttgccg
     6541 gctatcgcgc cgtgatcgat gccgccgccg aatacggccg ggcgctgccg atgatgatga
     6601 ccgcagccgg caccgtgccg gcgacgcgcg tgttcgtcat gggcgccggc gtcgccggcc
     6661 tgcaggcgat cgcgacggcg cgccgcctcg gcgccatcgt cactgcgacc gacgtgcggc
     6721 ccgcggccaa ggagcaggtc gagagcctcg gcgccaagtt catcgcggtc gaggacgacg
     6781 aattccgcgc cgccgagacc gccggcggct acgccaagga aatgtcgaag gagtatcagg
     6841 ccaaacaggc cgcgctcgtc gccgaacaca tcaagaagca ggacatcgtc atcaccaccg
     6901 cgctcattcc cggccggccg gcgccgcggc tcatttccaa ggagatggtg gcgtcgatgc
     6961 ggcccggctc ggtgatcgtc gatctcgccg tcgagcgcgg cggcaacgtc gaaggcgtcg
     7021 ccgccgacgc ggtcgcaaac gtgggcggcg tcaagatcgt cggctacagc aacgtaccgg
     7081 gccggctcgc cgccaccgcc tcgagcctct acgccaagaa cctctacgcg ttcctggaaa
     7141 tcctgatcga caaaaagacc aaggcgctcg ccgtcaactg ggacgacgat atcgtcaagg
     7201 cgacggcgct cacccgcgac ggcgcgatcg tgcatccgaa cttcaagccg aagagcgcgg
     7261 cgtgacgcca cttttacatg aagcttcatc gtcattgccg ggcttgaccc ggcaatccat
     7321 gcggtcaagc gggcttccgc gaatgtttcg atcgccgccg ttcagcatgg atgcgcgggt
     7381 caagcccgcg catgacgaac ctggaatcgg cgcgcggatc atgcccgtgc gcgacgcctg
     7441 acaggagagc cttgcatgat cacgctttca gtcgtggcgc agctcgacat catctccacc
     7501 gcgagcggcg gcgccatcca cgcggtcgcc gacgcggtcg acccgttcgt gttccgcctc
     7561 tcgatcttcg tgctcgccgt cttcgtcggc tactacgtcg tctggtcggt gacgccggcg
     7621 ctgcacacgc cgctgatgtc ggtgaccaac gccatctcct cggtcatcgt cgtcggcgcg
     7681 ctgctcgccg tcggcgtcgg gcttatcgcc aacgacgccg ggccgatatg ggcgcgcgcc
     7741 tttggcttcg tggcgctgat tcttgcctcg gtgaatatct tcggcggctt cctggtcacc
     7801 cagcgcatgc tcggcatgtt ccagaggaag cagaagtgat cgagatcggc agcgcacaac
     7861 gggagcggac acgatgagcg ccaatctcac tgcgctggcc tatctggtgg ccggcgtcct
     7921 tttcatcctg gcgctgcgcg gcctgtcgaa cccggagacg agccggcgcg gcaatctgtt
     7981 cggcgtgatc ggcatggcgg tcgcggtcgc gacgacgctc gccgcgcatc cgccggtcgg
     8041 cttcgccgcc tgggtgctgg tggtggtcgg ggtcgcgctc ggcggcggcg ccggcgcgat
     8101 gatcgcgcgg cgcgtgccga tgacctcgat gccggaactc gtcgccgcct tccattcgct
     8161 ggtcggcatg gccgcggtgc tggtcgcggc cggtgcattc tacgcgcccg cggccttcga
     8221 catcggcgcc gccggcgcga tccacggcca gagcctgatc gaaatgtcgc tcgggctggc
     8281 gatcggcgcc gtcaccttca ccggctcggt gatcgcgttc ctgaaactct ccgcccgcat
     8341 gagcggcaag ccgatcatcc tgcccggccg gcacgtgatc aatatcgcgc tcggcctcgc
     8401 cctcgtcgcg ctcgttgtct ggttcttcgc cagtcagcac catctcgcgt tctggctgat
     8461 cgcggcggtc tcgttcctgc tcggcgtgct catcatcatc ccgatcggcg gcgccgacat
     8521 gccggtcgtg atctcgatgc tcaactccta ttccggctgg gcggcggcgg gtatcggctt
     8581 cacactcggc aattcggcgc tgatcatcac cggcgcgctc gtcggctcgt ccggcgcgat
     8641 cctgtcgtac atcatgtgca agggcatgaa ccgctcgttc atctcggtga tcctcggcgg
     8701 cttcggcggc gaggtggcgg gcccgagcgg cgccgccgac aaccgaccgg taaaactcgg
     8761 ctcggcggaa gacgccgctt acctcctgaa gaactcctcg cgcgtcatca tcgtgccggg
     8821 ctacggcatg gcggtcgcgc aggcgcagca cgccttgcgc gagatggccg acaagctgaa
     8881 ggccgaaggc gtcgaggtga aatacgcgat ccacccggtc
//
LOCUS       DATMQB010000312         9265 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_743965, whole genome shotgun sequence.
ACCESSION   DATMQB010000312 DATMQB010000000
VERSION     DATMQB010000312.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9265)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9265)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9265
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_743965"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..519)
                     /locus_tag="VNY79_09035"
     CDS             complement(<1..519)
                     /locus_tag="VNY79_09035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="apolipoprotein N-acyltransferase"
                     /protein_id="HWX72631.1"
                     /translation="MKPKDVVHAIVLAWGWRRWLIAFAAGALSAAAMAPLNAWPVLFL
                     TFPVLVWLIDGAGLGRWGGITVAATTGWWFGFGYFLAGLYWIGYAFLVDAPTFGWLLP
                     IAVIGLPSMLAFFTALAVAVARMLWTRGALRILSLGVALTATEWLRGHVLTGFPWNAL
                     GYALTSPLALAQG"
     gene            complement(516..1565)
                     /locus_tag="VNY79_09040"
     CDS             complement(516..1565)
                     /locus_tag="VNY79_09040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin family protein"
                     /protein_id="HWX72632.1"
                     /translation="MVVPQPAEPRDGWLTRVMRILFGWRAAATRADLELVLTGEQRES
                     GFSPAEATMLKNILALRECRIESIMVPRADIVAVQQGITVGELVKVFAGASHSRLVVY
                     NDALDDPTGMVHIRDLLAFMAARATLDPAAAKEREPALPADLDLANIDLSMPLTAAKI
                     VREILYAPPSMPALDLLAKMQATRIHLALIIDEYGGSDGLVSIEDLVELIVGDIADEH
                     DEAETPTVTRQSDGSFLATGRASLEDVRAVIGEEFDVGDAAQEVDTLGGYLVMRAGHV
                     PVRGELVPGPAAFEAEVLDADPRRVKRVKIYRRKDRRPGAARDLPNALRPSVARAPAA
                     REDAGRPNPNSPPTP"
     gene            complement(1663..2160)
                     /gene="ybeY"
                     /locus_tag="VNY79_09045"
     CDS             complement(1663..2160)
                     /gene="ybeY"
                     /locus_tag="VNY79_09045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006468142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HWX72633.1"
                     /translation="MTQALRKPRGALAIDLMVESDRWRQSGDAAALARAAVIEAAAAL
                     STARAELAIVLTDDSAMRALNRIWRGVDKATNVLSFPTKRAGEGPPLLGDIVLAYDTI
                     AREARRQRKPFAHHVAHLAVHGFLHLLGYDHEQHADAEAMEQAERDILRRLAIPDPYR
                     RPAKA"
     gene            complement(2157..3185)
                     /locus_tag="VNY79_09050"
     CDS             complement(2157..3185)
                     /locus_tag="VNY79_09050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HWX72634.1"
                     /translation="MRTPEIEESLTVAADNTAQIALTFDDNRLASALFGQYGQNLALI
                     ERRLGVVATSRGNQVTLEGPREGCEQARRVLEGLYERLKRGDELVQGDVDGAIRLAIS
                     QGSLFDFDPAAALGGFAEINLRKRRVRAHTPAQDAYVRALKRHALVFSTGPAGTGKTW
                     LAVAHAVQLFERKEVDRIVLSRPAVEAGERLGFLPGDMREKVDPYLRPIYDALYDLMD
                     ARIVERALQTTEIEIAPLAFMRGRTLSHAAVILDEAQNTTAMQMKMLLTRLGENSRMV
                     VNGDPSQVDLPPGQTSGLAEAVRLLEGIDGIAHVPFTSADVIRHELVARIVEAYDKAA
                     AAKRERRE"
     gene            complement(3186..4574)
                     /gene="miaB"
                     /locus_tag="VNY79_09055"
     CDS             complement(3186..4574)
                     /gene="miaB"
                     /locus_tag="VNY79_09055"
                     /EC_number="2.8.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016782 - transferase activity,
                     transferring sulphur-containing groups [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (N6-isopentenyl
                     adenosine(37)-C2)-methylthiotransferase MiaB"
                     /protein_id="HWX72635.1"
                     /translation="MKGSRKLYIKSFGCQMNVYDSQRMADTLAPDGYVETATPADADL
                     VILNTCHIREKAAEKVYSELGRMRRLKEAAAGEGRNVMIAVAGCVAQAEGEEIIRRAP
                     AVDLVVGSQNYHRLPALLARAARTGKVVDTQFPVEDKFDALAPPSLAATRGRGVTAFV
                     TVQEGCDKFCTFCVVPYTRGAEISRPVRKIVAEVERLADAGVREITLIGQNVNAYHGG
                     GEDGRSWPLARLIARVAELPGIERLRYSTSHPLDMTDDLIAAHRDLPRLMPQLHLPVQ
                     SGSDRILAAMNRRHTRADYVDVVARLKAARPDLALSSDFIVGFPGETEDDFAATLGLV
                     AEVGYSSAFSFKYSPRPGTPGADMDEQVEEEVKSERLQRLQQEIDRQQAAFNRSCLGR
                     TLSVLFERPGRHGGQLVGRSPYLQPVQVEAPETMLDRIAAVTITEIASNSLFGALAQA
                     PAREPAFAGAGA"
     gene            complement(4667..5137)
                     /gene="rimI"
                     /locus_tag="VNY79_09060"
     CDS             complement(4667..5137)
                     /gene="rimI"
                     /locus_tag="VNY79_09060"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008999 -
                     peptide-alanine-alpha-N-acetyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA];
                     GO_process: GO:0042254 - ribosome biogenesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HWX72636.1"
                     /translation="MNFVTRLLSRSEPTMSEARQRDAAAIAALHAASFQRGWGEDEFH
                     RLLIDRAVVAHRAVIGRTMVGFILSRMAAGEVEILSVAIAPAWRGRGFARPLLDLHLR
                     RLAGLGVRAVFLEVDEHNEPACRLYRNAGFSEVGVRKGYYQEGASALVLRRDLG"
     gene            complement(5137..5820)
                     /gene="tsaB"
                     /locus_tag="VNY79_09065"
     CDS             complement(5137..5820)
                     /gene="tsaB"
                     /locus_tag="VNY79_09065"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HWX72637.1"
                     /translation="MRVLAIDTALAACSAAVLDTDDGGIVASQSLPMTRGHAEALMPL
                     LVRLMQDAGMAFRDIDRVVVTTGPGSFTGLRVGIAAARGIALAAGKPAVGLSTLAAYA
                     APHMAADETVPVVAAIDARHAHVYLQVFGPGGRTHTLPRLSPLAEAVRAAAAVRSCIV
                     GSAAQSVAAALSEIDAKPAVVDARAAPDITWVARMGAVVPEGKSPPKPQYLRAPDAQP
                     QNAARLPRR"
     gene            complement(5889..6446)
                     /locus_tag="VNY79_09070"
     CDS             complement(5889..6446)
                     /locus_tag="VNY79_09070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HWX72638.1"
                     /translation="MFIQTEATPNPATLKFLPGRAVLEKGTLDLRSSEEAAQSPLSER
                     LFAIPGVSGVFFGSDFITITKNTGEWQQLKPMILGTIMEHFMSGAPLLTHESAEETGA
                     DEFFDTADAETVATIKELIETRVRPAVANDGGDITFRGFKDGVVYLNMKGACAGCPSS
                     TATLRHGIQNLLRHFVPDVVEVRPM"
     gene            complement(6605..7099)
                     /locus_tag="VNY79_09075"
     CDS             complement(6605..7099)
                     /locus_tag="VNY79_09075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HWX72639.1"
                     /translation="MPRRRRSYEAGHQPKLLVVIDDTEECDRAVYYASRRAARIGANV
                     IMLRVIETQDASQQWLGVADIMRAEAHEEADAELAKYATRANGIAGITPERAVREGDK
                     AEEILRLIDEDEDIFILVLAANTSSEGPGPLVATIGRTAGDYPIPVAIVPGHLSDEEI
                     DALS"
     gene            7416..>9265
                     /locus_tag="VNY79_09080"
     CDS             7416..>9265
                     /locus_tag="VNY79_09080"
                     /inference="COORDINATES: protein motif:HMM:NF012602.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-dependent oxidoreductase"
                     /protein_id="HWX72640.1"
                     /translation="MASSAENGGGEGERMTGCRRRVFRGCTLCEASCGLALELEGDRI
                     VSVRGDEEDPLSHGFICAKGVAIADLHHDPDRLRSPMRKTAEGKFEPIGWEEAFAIVG
                     ARLKALRATHGADAIALYLGNPIIHNHGALLLRAGFVHAFGTRNCFSAGSQDTSPRFA
                     ASFHLYGSSLVTPVPDIDRTHYFLCVGANPAVSNGSFMTAPDVRRRLRTVRERGGRIV
                     VVDPRRTETAREADQWVPIRPGGDAALLLAMTQTLVAAGRVDETRIAAVARGWPQVRE
                     RLKSFTPERVTAQTGVAPETIRSLAHEFADAPSSVAYSRVGVCNSRFGTLGTWATDVL
                     NLAAGRLGAVGGATFPTPPIAIAAVAPHLALGDGHGRWCSRVRGLPEVFADLPANTLA
                     DEIETPGDGQVRALFVYAGNPVLSVPNSRRLSRALEKLEFMVAVDVYVDETTRHADVI
                     LPPAWTFAEDYFEAFLPNVAVRNFARFAPPVVARGAGERADWEILLEIAERMGGGASG
                     FFVVDRIIRLARRLGLRWTPNTTIDMLLRLGPHGDRYLPWSRGLNLKRLAAMPHGADL
                     GALEPGVARRVRYRDGRMRLAPDVIMTALAELEKIERPPPQLLLIGRRDPR"
BASE COUNT         1435 a         3110 c         3213 g         1507 t
ORIGIN      
        1 gccctgcgcc agcgccagcg gggaggtgag ggcatagccc aaggcgttcc agggaaaacc
       61 ggtcagcaca tggccgcgca gccattcggt cgcggtcagc gccacaccga gagagaggat
      121 gcgcagcgca ccccgcgtcc acagcatccg cgccaccgcc acagcgagcg cagtaaagaa
      181 cgcaagcatc gacggcaggc cgatgaccgc gatcgggagc agccagccga aggtcggcgc
      241 atcgaccagg aaggcgtagc cgatccagta gaggccggcg aggaaatagc cgaagccgaa
      301 ccaccagcct gtcgtcgccg cgacggtgat gccgccccag cggcccagtc cggcgccgtc
      361 gatgagccag accaggaccg gaaaggtcag gaacagaacc ggccacgcgt tgagcggcgc
      421 catcgccgcc gccgacaaag cgccggcggc gaaggcgatc agccaacgtc gccatcccca
      481 cgccagcacg atcgcgtgga cgacgtcctt cggcttcacg gcgtcggtgg agagttcggg
      541 ttgggccggc cggcatcttc gcgcgccgcc ggcgcccgag cgacggacgg ccgcagcgca
      601 ttcggcaggt cgcgtgccgc gccgggccgg cggtccttgc ggcgatagat tttcacccgc
      661 ttcacccggc gcggatcggc gtcgagcacc tcggcctcga aagcggccgg acccggcacc
      721 agctcgccgc gcaccggcac gtgtccggcg cgcatgacca gatagccgcc gagcgtatcg
      781 acttcctgcg ccgcgtcgcc gacgtcgaac tcctcgccga tcacggcgcg cacatcttcg
      841 aggctcgcgc gcccggtggc gaggaacgag ccgtcgctct ggcgcgtcac cgtcggcgtc
      901 tccgcctcgt cgtgctcgtc ggcgatgtcg ccgacgatca gctcgaccag gtcctcgatc
      961 gagaccagac cgtcgctgcc gccgtattcg tcgatgatga gcgcgaggtg aatgcgcgtc
     1021 gcttgcatct tggcgagcag atcgagcgcc ggcatcgacg gcggcgcgta gaggatttcg
     1081 cggacgatct tggcggcggt cagcggcatc gaaagatcga tgttggcaag atcgagatcg
     1141 gccggcagcg caggctcgcg ttctttggcg gcggccggat cgagcgtcgc gcgcgcggcc
     1201 atgaacgcca ggaggtcgcg gatgtggacc atgccggtcg gatcgtcgag cgcgtcgttg
     1261 tagaccacga gacgcgaatg gctggcgccg gcgaacactt tgaccagctc gccgacggtg
     1321 atgccctgct gcacggcgac gatgtcggcc cgcggcacca tgatgctctc gatcctgcac
     1381 tcgcgcaggg cgaggatgtt cttgagcatc gtggcttctg cgggcgagaa gccggattcg
     1441 cgctgttctc cggtcagcac gagttcaaga tcggcgcggg tcgcggccgc tctccagccg
     1501 aacaggatgc gcatcacgcg cgtgagccag ccatcgcgcg gctcagcggg ctgcggcacg
     1561 accatgggaa ggcgtcgatg ctcgctctcg ctcgattcgc tgcggtgggg ggcttgggac
     1621 atggctctgg gcaagggggg ttgtcggtgt caggcgtcgg cttcaggcct tggccgggcg
     1681 ccgatagggg tcgggaatcg ccagccgccg caggatgtcg cgctcggcct gttccatcgc
     1741 ctcggcatcc gcgtgttgct cgtgatcgta gcccaaaagg tggagaaaac catggacggc
     1801 cagatgggcg acatgatgcg caaagggctt tcgttggcgg cgtgcctccc gcgcgatggt
     1861 gtcgtaggcg agaacgatgt cgccaaggag tggcggccct tcacccgcgc gcttcgtcgg
     1921 gaacgagagc acgttcgtcg ccttgtcgac gccccgccag atgcggttga gcgctcgcat
     1981 tgccgaatca tcggtgagga cgatagcaag ctccgcccgc gctgtggaca gcgccgcggc
     2041 ggcttcgatc accgccgcgc gcgcgagcgc cgcggcatcg ccgctttgcc gccagcgatc
     2101 ggactcgacc atcaggtcga ttgcgagcgc gccgcgcggc ttgcgcaagg cctgcgtcat
     2161 tcccgccgct cgcgcttggc cgccgcggcc ttgtcgtagg cctcgacgat gcgcgcgacg
     2221 agttcgtggc ggatcacgtc ggcggacgtg aacggcacgt gcgcgatgcc gtcgatgcct
     2281 tccagcagcc gcaccgcttc ggcgaggccg gaagtctgcc ccggcggcaa atccacctgg
     2341 ctcggatcgc cgttgaccac catgcgactg ttctcgccga gccgcgtaag cagcatcttc
     2401 atctgcatcg ccgtcgtgtt ctgcgcctcg tcgagaatga ccgcggcatg cgacaaggtg
     2461 cggccgcgca tgaaggcgag cggcgcgatt tcgatctcgg tggtctgcag cgcgcgctcg
     2521 acgatgcgcg cgtccatcag atcatagagc gcgtcgtaga tcggccgcag ataaggatcg
     2581 accttttcgc gcatgtcacc cggcaaaaag ccgaggcgct cgccggcctc caccgccggc
     2641 cgcgacagga cgatgcggtc gacctccttg cgctcgaaca attgcacggc gtgggcgacg
     2701 gcgagccagg tcttgccggt gccggcggga ccggtggaga agacgagggc gtggcgcttg
     2761 agcgcgcgaa cgtaggcgtc ctgcgccggc gtgtgcgcgc gtacgcgccg cttgcgcagg
     2821 ttgatctccg caaaaccgcc tagcgccgcg gcggggtcga agtcgaacag cgagccttgc
     2881 gaaatcgcca ggcggatggc gccgtcgacg tcgccttgca ccagctcgtc cccgcgcttg
     2941 agccgctcat agaggccttc gagcacgcgg cgcgcctgct cgcagccttc gcgcgggccc
     3001 tcgagcgtga cttgattgcc gcgcgaggtc gcgaccacgc ccagccggcg ttcgatgagc
     3061 gcgaggtttt gtccgtattg cccgaacagc gcggaggcga ggcggttgtc gtcgaaggtg
     3121 agggcgatct gtgcggtgtt gtccgcggcg acggtgagcg attcctcgat ctcaggcgtt
     3181 cgcattcagg ctcctgcgcc ggcgaaggcc ggctctcgcg cgggcgcttg cgcaagcgcg
     3241 ccgaacagac tgttgctggc gatttcggtg atggtgacgg cggcgatgcg gtcgagcatc
     3301 gtctcgggcg cctcgacctg caccggttgc agataaggcg agcggccgac cagctggccg
     3361 ccgtggcggc ccggccgttc gaacagcacc gacaaggtgc gcccgagaca gctgcgattg
     3421 aaagcggcct gctggcggtc gatctcctgc tgcaggcgct gcaggcgctc ggattttacc
     3481 tcttcctcga cctgctcatc catgtcggcg ccgggcgtgc ccggccgcgg cgagtatttg
     3541 aacgagaacg cgctggaata accaacctcg gcgacgaggc cgagcgtggc ggcaaaatcg
     3601 tcttcggtct cgcccgggaa accgacgata aaatcggagc taagcgcaag atcgggccgc
     3661 gccgccttga ggcgggcgac aacgtccacg taatccgcgc gcgtgtggcg gcggttcatg
     3721 gcagcgagaa tgcggtcgga gcccgactgc accggcagat gcaactgcgg catgagccgc
     3781 ggcagatcgc ggtgggccgc gatcagatca tccgtcatgt cgagcggatg gctcgtggag
     3841 taacgcaacc gctcgatgcc cgggagctcg gcgacgcggg cgatgagccg cgccagcggc
     3901 cagcttcgcc catcctcacc cccgccgtgg taagcgttga cgttctggcc aatgagcgtg
     3961 atctcgcgca cgccggcatc ggccagccgc tcgacctcgg cgacgatctt cctcaccggg
     4021 cgcgaaatct cggcgccgcg cgtataggga acgacacaga acgtgcagaa cttgtcgcac
     4081 ccctcctgca ccgtgacgaa ggcggtgacg ccgcgcccgc gcgttgccgc aaggctcggc
     4141 ggcgccagcg cgtcgaactt gtcctcgacc gggaactggg tgtcgacgac cttgccggtg
     4201 cgtgcggcgc gcgcgagcag ggccggcagg cggtgatagt tctgcgatcc gacgacgaga
     4261 tcgacggccg gcgcgcggcg gatgatctcc tcgccttcgg cctgcgcgac gcagccggcc
     4321 accgcgatca taacattgcg gccctcgccg gcggcggcct ccttcaagcg gcgcatgcgg
     4381 ccgagctcgg aatagacctt ctccgccgcc ttctcccgga tgtggcaggt gttgaggatg
     4441 acgagatcgg cgtccgcggg cgttgcggtc tcgacatagc cgtccggcgc cagggtgtcc
     4501 gccatacgct gcgagtcgta gacgttcatc tggcagccga aggattttat gtagagtttc
     4561 cgtgaaccct tcattccgct cggtttcgac ttcgaacctt tctcaggtgc gcgaatcctg
     4621 gccgctccgg ccggtgccgg catcataccg cgtttgcgcc gacccgtcag ccgaggtcac
     4681 gccgcagcac cagggccgac gcgccttcct gatagtagcc tttacgcacg cccacctcgg
     4741 agaaacccgc gttccggtag agccggcagg ccggttcgtt gtgttcgtcc acttcgagga
     4801 acacggcgcg gacgccaagg ccggccagac ggcgcaggtg gagatcgagg agcggccgcg
     4861 cgaagccgcg gccgcgccag gccggtgcga tggcgaccga aaggatttcc acttcgccgg
     4921 cggccatgcg cgagaggatg aatccgacca tcgtccggcc gatcacggcg cgatgcgcaa
     4981 cgaccgcgcg gtcgatgaga agccggtgaa attcgtcctc gccccagccg cgctgaaacg
     5041 acgccgcgtg caaggccgca atggcggcgg catcgcgttg gcgcgcctcc gacatcgtcg
     5101 gctcggaccg gctcaagagg cgcgtgacga agttcatcat cggcgcggga gtcgtgcggc
     5161 gttttgcggc tgcgcgtcgg gggcgcggag gtattgcggt ttcggcggcg attttccttc
     5221 cggcacgact gctcccatgc gcgcgaccca ggttatgtcg ggtgccgcgc gcgcatcgac
     5281 gactgccggc ttggcgtcga tctccgatag agcggcggcg acggattggg cggcggagcc
     5341 gacgatgcag gaccgcaccg ctgctgcggc ccgcaccgct tcggcgagcg gcgagagccg
     5401 cggcagggtg tgcgtgcgcc cgccgggccc gaaaacctgg aggtagacgt gcgcatgccg
     5461 tgcgtcgatc gcggcgacca ccggcacggt ttcgtcggcg gccatatgcg gagccgcata
     5521 ggcggcgagc gtcgacaggc ccacggccgg cttccccgcc gcgagcgcga tgccgcgcgc
     5581 ggcggcgatg ccaacgcgca agcccgtgaa gctgcccggt cccgtcgtca ccaccacccg
     5641 atcgatatcg cggaaagcca tgccggcatc ctgcatcagc cgcacgagca gcggcatcag
     5701 cgcttcggcg tggccgcgcg tcatcggcag gctttggctc gccacgatgc cgccgtcatc
     5761 ggtatcgagc acggccgccg agcaggcggc gagcgccgta tcgatggcga gcacacgcat
     5821 cggcaatcac ccggcccggt tcggcaacga acgccgcggc gcgcggcgga aggacttgac
     5881 gcgccggctc acattggccg gacttcgacg acgtcgggga cgaaatgacg cagcaggttc
     5941 tgaataccgt ggcgcaacgt cgccgtcgat gatgggcagc ccgcgcaggc ccctttcatg
     6001 ttgaggtaga cgacgccgtc cttgaagccg cggaaggtga tatcgccgcc gtcattggcg
     6061 acggccggcc gcacccgcgt ttcaatcagc tccttgatgg tggccacggt ctcggcgtcg
     6121 gcggtatcga agaactcgtc ggcgccggtc tcctcggcgc tttcgtgggt cagcagcggc
     6181 gcccccgaca tgaagtgctc catgatggtg ccgaggatca tcggtttgag ctgctgccat
     6241 tcgcccgtgt tcttggtgat ggtgatgaaa tcggagccga aaaatacccc gctgacgccg
     6301 ggaatggcga acagtcgctc ggagagcggc gactgcgccg cctcctcgct gctgcgcagg
     6361 tcgagcgttc ccttttcgag caccgcccga ccgggcagga atttcaacgt cgccggattg
     6421 ggcgttgctt cggtctggat gaacatcgcg ttctccgtcg cctctttcgg ccactgcggc
     6481 cgggccgtga caggcttgaa tattgtaaca cgtggcgaat tctgaccgga agttcaagtg
     6541 tgccttcgct tttccgggcc tgtccctgtg ccgtgggcgc tttccacccg acagcgcgct
     6601 cggcttacga cagcgcgtcg atctcctcgt cgctgaggtg gccggggacg atggcgaccg
     6661 ggatcggata gtcgccggcg gtccggccga ttgtcgccac cagcggaccc ggcccctccg
     6721 aactggtgtt cgcggcaagc accaggatga aaatatcctc gtcctcgtcg atcagccgga
     6781 gaatctcctc ggctttgtcg ccttcgcgca ccgcgcgctc gggcgtgatg ccggcgatgc
     6841 cgttggcgcg cgtcgcgtat ttggcgagct ccgcgtccgc ctcctcgtgc gcctccgcgc
     6901 gcatgatgtc ggcgacgccg agccattgct ggctggcgtc ctgcgtttcg atgacgcgca
     6961 gcatgatgac gttggcgccg atgcgcgccg cgcgccggct cgcgtagtag acggcgcgat
     7021 cgcactcctc ggtgtcgtcg atgacgacga gaagctttgg ctgatgaccg gcttcgtagc
     7081 tgcggcgcct gcggggcatg aaatttctcc ggcataaaag acataacgcc acaagcgaat
     7141 catgctggca tgggggtgtg tcgtccgaca agccggtcgt tgcggggtca tgggcaattt
     7201 cgcagcgaag cgttctgcgc tacactccgt cgacatcgcg gcgtttcctc gcatcgacct
     7261 aaaagtcgat gctgcacgac cgatttttgc tttttcgcag cccgattgag tctattcggg
     7321 tgagaaatcc gggcgatgag gcgcgcattt ccgcggcgca agcactgccc ccgcagtcac
     7381 ggagattacg tgatccccgt gctgtcgagg cattgatggc gtcgagcgcg gaaaacggcg
     7441 ggggcgaagg tgagcggatg acgggctgcc ggcgcagggt gttccgcggc tgcacgctct
     7501 gcgaggcgag ttgcgggctt gcgctcgagc tcgaaggcga ccgcatcgtg tcggtgcgcg
     7561 gcgacgaaga agaccccctg tcacacggct ttatttgcgc caaaggcgtg gcgattgccg
     7621 acttgcacca cgatcccgac cgcctgcgct cgccgatgcg aaaaacggcg gaaggaaagt
     7681 tcgagccgat cggctgggag gaagcgttcg cgatcgtcgg cgcgcggctc aaggcgctgc
     7741 gcgccaccca cggcgccgac gcgatcgcgc tctacctggg caacccgatc atccacaacc
     7801 acggcgccct gctgctgcgg gcgggtttcg ttcacgcgtt cggcacccgc aactgcttca
     7861 gcgcgggctc gcaggatacg agcccgcgct tcgcggcgtc ttttcatctc tacgggtcgt
     7921 cgctggtcac cccggtgccc gacattgacc gcacgcatta tttcctctgc gtcggggcca
     7981 accccgcggt gtcgaacggc agcttcatga cggcgcccga cgtacggcgc cggctgcgca
     8041 ccgtccgcga acggggcggc cgcattgtcg tggtcgatcc gcgccgcacc gagaccgcgc
     8101 gcgaggccga ccaatgggtg ccgatccggc cgggcggcga cgccgccctg ctgctggcga
     8161 tgacgcagac tctggtggcc gccggacgcg tggacgagac gcgcattgcc gcggtcgcgc
     8221 gtggctggcc gcaggtccgc gagcggctca aaagcttcac gccggagcgc gtcacggcgc
     8281 agaccggcgt cgcgccggaa accatccgct cgctcgcgca cgagtttgcc gatgcgccat
     8341 cgagcgtcgc ctacagccgc gtcggcgtct gcaacagccg cttcggcacg ctcggcacct
     8401 gggcgaccga cgtgctcaat ctcgccgccg gacggctcgg cgcggtcggc ggcgccacgt
     8461 tcccgactcc gccgatcgcg attgcggcgg tagcccccca tctcgccctc ggcgacggcc
     8521 atgggcgctg gtgcagccgc gtgcgcgggc tccccgaggt ttttgccgac ctgcccgcca
     8581 acacgctggc ggacgagatc gagacgccgg gcgacgggca ggtgcgcgcg cttttcgtct
     8641 acgccggcaa cccggtcctc tcggtgccca acagccgaag gctgtcgcgg gcgctggaga
     8701 agctcgaatt catggtcgcg gtcgatgtct acgtggacga gaccacccgg cacgccgatg
     8761 tgatcctgcc gccggcctgg accttcgccg aggactattt tgaggccttt ctgccgaatg
     8821 tcgcggtgcg caactttgcc cgcttcgccc cgccggtggt cgcgcggggc gccggcgagc
     8881 gcgccgactg ggagatcctg ctggagatcg ccgagcggat gggcggcggg gcgagcgggt
     8941 tctttgtagt cgaccgcatc atccgcttgg ctcgccgcct cggcctgcgc tggacgccga
     9001 acaccacgat cgacatgctg ctgcgcctcg gtccgcacgg cgatcgctac ctgccgtggt
     9061 cccgcggcct caatctgaag cggctcgccg ccatgccgca tggcgccgat ctcggggcgc
     9121 tcgagccggg ggtcgcgcgc cgcgtgcgct accgtgacgg gcgcatgcgg cttgctcccg
     9181 acgtgatcat gacggcgctg gcagaactgg aaaaaatcga acgcccgccg ccgcagcttc
     9241 tgctgattgg gcggcgcgat ccgcg
//
LOCUS       DATMQB010000313         4779 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1369986, whole genome shotgun sequence.
ACCESSION   DATMQB010000313 DATMQB010000000
VERSION     DATMQB010000313.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4779
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1369986"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..486
                     /locus_tag="VNY79_09085"
     CDS             <1..486
                     /locus_tag="VNY79_09085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HWX72641.1"
                     /translation="IARVHGYAIGGGNVLATICDLTIASESAVFGQVGPKVGSVDPGF
                     GTAYLARVVGEKKAREIWYLCRRYTAKEALAMGLVNTVVPDDQLDAEVAKWCAEILER
                     SPSAIAIAKRSFNADTESIRALSWMGMQTLSFYYDTEESREGVRAFLEKRKPEFRKFV
                     R"
     gene            511..1275
                     /locus_tag="VNY79_09090"
     CDS             511..1275
                     /locus_tag="VNY79_09090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012110681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX72642.1"
                     /translation="MAFRGLKDQVALVTGGGSGIGRAISLRLAEEGCRLAVFDLNAAG
                     AEESVRLAGGTAAAFVVDITDHAAVTAAVERVENEVGGIGILVNNAGWDRMMNFVDTD
                     PTFWRKVIDINLVGHLNLHHAVLPRMVARRSGHVINIASDAGRVGSSGEAVYSACKGG
                     MIAFAKTIAREHARHGIRVNTICPGPTQTPLFASFADGMSGGAKLVDRLQQAIPLRRL
                     GQPEDYPGLVAFLASSDAEYITGQTISVSGGLTMSG"
     gene            1456..3033
                     /locus_tag="VNY79_09095"
     CDS             1456..3033
                     /locus_tag="VNY79_09095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011157269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase"
                     /protein_id="HWX72643.1"
                     /translation="MHDVTGVADISRIGDITRQHARTRPDRVAIHFEGQRLTYGELDR
                     RTNQVANGLIAEGIGRQRRIAILSKNGPAFFELWFGAAKVDVVLVPVNFRLAPSEVAF
                     VVGDAGAELLFVGADFYPLVDKVAPELKSVRRIIALDGVHGDWETYTDWVARQSDRDP
                     AVEVAAGNCAIQLYTSGTTGHPKGAQLSHANLLTLLPGALRQFGDWHEKDVNLVCMPL
                     FHIGGSGWGLIGFYRGVESVLMRDADPAAILRLIPEFRITKVFVVPALILFMLQSPQF
                     RATDFSSLELIVYGASPAPVDLVRNAVKVFGCGLAQVYGLTETTGAITYLPPEDHDEH
                     VPARLKSCGKAMTSVELRVVDALDNDVAVGEVGEIICRSPQIMLGYWNQAEATGKAVR
                     NGWFHSGDAGYLDRDGYLYIYDRVKDMIISGGENIYPAEVENALFSHPAVADVAVIGV
                     PDDKWGEAVKAVVVRKPGVELTPEALMVYARERIAGYKVPRSVDFVDALPRNPTGKIL
                     KRELRKPYWAGQERQVH"
     gene            complement(3235..4104)
                     /locus_tag="VNY79_09100"
     CDS             complement(3235..4104)
                     /locus_tag="VNY79_09100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HWX72644.1"
                     /translation="MNDKAVITCALTGVLTDPKQHHVPVTPEEMAREAKAAFDAGAAV
                     MHVHFRQQGPGKGHLPSWEPELAVAIMQAIRDACPGVILNETTGTMGPDISGPLACLR
                     AVKPEIAACNAGSLNYLKVRSDGSWAWPPHLFDNPVEKVNAYLEVMRETGTQPEFECF
                     DVGIVRCVGMYAKNGMFAGRPKYNFVMGVESGMPADPDLLRILQKLTIADAPWQVTAI
                     GRADIWPLHRRAAELGGHLRTGLEDTFYLPDGSKTGSNGALVGMLARYARDAGRAVAS
                     PDEARGLMGLEAA"
     gene            complement(4101..>4779)
                     /locus_tag="VNY79_09105"
     CDS             complement(4101..>4779)
                     /locus_tag="VNY79_09105"
                     /inference="COORDINATES: protein motif:HMM:NF012584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="biotin/lipoyl-containing protein"
                     /protein_id="HWX72645.1"
                     /translation="FPAGSDAMRRAAPDARLLGLAAVLMFEARARATEVSSASARWFS
                     TGAAAWPLRLTLDDTPHVANIATAGIDRYAVTLNDRTIDIAVVERQNGSVRFTAMGLQ
                     QTARFALSDDVLHLDLNGTTIAVRETPLEAAGAARRERSGRLVAPMNGAIVAVFAKPG
                     DRVSRGQRIVVLEAMKMQHEIGAERDGTVGEILVKPGDQVATRQVLAVLAPEPATAQE
                     RRTEETP"
BASE COUNT          788 a         1576 c         1600 g          815 t
ORIGIN      
        1 attgcccgcg tgcacggcta tgcgatcggc ggcggcaatg tgctggcgac gatctgcgat
       61 ctcaccatcg ccagcgagag cgcggtgttc ggccaggtcg ggccgaaagt cggttcggtc
      121 gatccgggct tcggcaccgc ctatctcgcg cgcgtggtcg gcgagaagaa agcgcgcgag
      181 atctggtatt tgtgccggcg ctatacagcg aaagaggcgc tcgccatggg cctggtcaat
      241 accgtggtgc ccgacgatca gctcgacgcc gaagtggcga aatggtgcgc cgagattctg
      301 gaacgcagcc cctcggccat cgccatcgcc aagcgctcgt tcaacgccga taccgaaagc
      361 attcgcgcgc tgagctggat gggcatgcag acgctgtcgt tctactacga caccgaggag
      421 tcgcgcgaag gggtgcgcgc cttcctggag aagcgtaagc ccgaattccg caagttcgtg
      481 cgctgacgcg tccgctgcgg agcgaacggc atggcattcc gcggattgaa ggatcaggtc
      541 gcccttgtca ccggtggcgg cagcggcatc ggccgggcga tctcgctgcg gctcgccgaa
      601 gagggctgcc ggctcgccgt gttcgatctc aacgccgcgg gcgccgaaga aagcgttcgc
      661 cttgccggcg gcacagccgc cgccttcgtg gtcgacatca ccgaccatgc cgcggtcacg
      721 gccgcggtcg agcgcgtcga aaacgaagtc ggcggcatcg gcatcctggt caacaacgca
      781 ggctgggacc ggatgatgaa tttcgtcgac accgacccga cgttctggcg caaggtcatc
      841 gacatcaatc tggtcggtca cctcaatctg catcatgcgg tgctgccgcg catggtcgcg
      901 cgccgctcgg gccacgtcat taacatcgcc tccgacgcgg gccgcgtcgg ctcgagcgga
      961 gaggcggtct actcggcctg caagggcggc atgatcgcct tcgcgaagac gatcgcccgc
     1021 gagcacgcgc ggcacggtat cagggtcaac accatctgcc cgggaccgac gcagacgccg
     1081 ctttttgcgt ccttcgccga cggcatgtct ggcggcgcga agctcgtgga ccggttgcag
     1141 caggccattc cgctgcgccg gctgggccag cctgaagact atccggggct cgtcgctttc
     1201 ctcgccagca gcgatgccga atacatcacc gggcagacca tttcggtttc gggcggcctg
     1261 acgatgagcg ggtgaaggcg ccgaggcgac tgtcgcggaa ctcgggcgcg ggggcgtccc
     1321 tccttggaac tccagctcgc gcgaggggct tcgcgcttcc catcagttcg gaaaatacct
     1381 accatcgtgc cacaaccacg aggcgccaca ggcgcccgcg acacgcaaat ccgcagcgct
     1441 ttcgaggaga aacgcatgca cgatgtcacc ggcgttgccg acatttcccg gatcggcgac
     1501 atcacgcgcc agcacgccag aacccgtccc gatcgggtgg ccatccattt cgagggacag
     1561 cgcctcacct atggcgagct tgatcgccgg accaatcagg tggccaacgg gttgatcgcc
     1621 gagggcatcg ggcggcaacg gcgcatcgcc atcctctcca agaacgggcc ggccttcttc
     1681 gagctctggt tcggcgcggc caaggtcgac gtggtgctgg tgccggtgaa tttccgcctc
     1741 gcgccgtccg aggtcgcgtt tgtggtcggg gatgccggtg cggaactcct gtttgtcggc
     1801 gccgatttct atccgctcgt cgacaaggtc gcgccggaat tgaaatcggt gcgccgcatc
     1861 atcgcgctcg acggcgtgca cggcgactgg gaaacctata ccgactgggt cgcgcgccaa
     1921 tcggaccgtg accctgcggt cgaggtggcg gcaggcaact gcgccattca gctctacacc
     1981 agcggcacca ccggtcaccc caagggcgcg cagctgagcc acgccaacct cttgaccttg
     2041 ctgccgggcg cgctgcgcca gtttggtgat tggcacgaga aagacgtcaa tctcgtctgc
     2101 atgccgctct ttcatatcgg cggcagcggc tggggattga tcggcttcta tcgcggcgtg
     2161 gaaagcgtgc tgatgcgcga cgcggaccct gccgccattc tgcggctcat tccggagttt
     2221 cgcatcacca aggtcttcgt ggtgccggcg ctcatcctgt tcatgctgca gtcgccgcaa
     2281 ttccgcgcga ctgacttttc ctcgctcgaa ctcatcgtct acggggcgtc cccggcgccg
     2341 gtcgacctgg tgcgcaacgc ggtcaaggtg ttcggctgcg gcctcgcgca ggtctatggg
     2401 ctgaccgaga ccaccggcgc catcacctat ctgccgccgg aagaccacga cgagcacgtg
     2461 ccggcgcgtc tcaagtcctg cggcaaggct atgaccagcg ttgagctgcg cgtggtcgac
     2521 gcgctcgaca atgacgtcgc cgtcggcgag gtgggcgaga tcatctgccg ctcgccgcag
     2581 atcatgctcg gctactggaa ccaggctgag gcaaccggca aggcggtccg caacggctgg
     2641 ttccacagcg gcgatgccgg ttacctcgac cgcgacgggt atctctacat ctacgaccgg
     2701 gtgaaggaca tgatcatctc cggcggcgag aacatctatc ccgccgaagt ggagaacgcc
     2761 ttgttcagcc accccgccgt cgccgacgtg gcggtgatcg gcgttcctga cgacaaatgg
     2821 ggcgaggcgg tgaaggcggt cgtggtgaga aagcccggcg tcgagctcac gcccgaggcg
     2881 ctgatggtgt acgcccgcga gcgcatcgcc ggctacaagg tgccgcgctc ggtcgatttc
     2941 gtcgatgcgc tgccgcgcaa cccgaccgga aagatcctca agcgcgagct gcgcaagccg
     3001 tattgggccg ggcaggagcg ccaggttcat taggctcatc cgctcgttcc cgcgaaagcg
     3061 gaatcaagtc attccggggc cgagcgaagc gaggagcccg gaatccataa ccagcatccg
     3121 tgaatatgga ttccgggttc gcggcctgtg gccgcgcccc ggaatgacga cggattgtcc
     3181 ggattctctg aaccgcgttc cggtttacgc ggggaaagcg ggcggagctc ttgttcaggc
     3241 agcctcaagg cccatgaggc cacgcgcctc gtcggggctc gcgacggcac ggccggcgtc
     3301 gcgcgcatag cgcgccagca tgcccacgag cgcgccgttc gagccggtct tgctgccgtc
     3361 gggcagatag aaggtgtctt cgaggccggt gcgcagatgg ccgccgagtt cggcggcccg
     3421 gcggtgcagc ggccagatgt cggcgcggcc gatcgcggtg acctgccacg gggcgtcggc
     3481 gatggtgagc ttctgcagga tccggagcag atcaggatca gccggcatgc cggattccac
     3541 gcccatgacg aaattgtatt tcggccggcc cgcgaacatg ccgttcttgg cgtacatgcc
     3601 gacgcagcgc acgatgccga catcgaagca ttcgaattcc ggctgcgtgc cggtctcccg
     3661 catcacctcg agataggcgt tgaccttctc caccggattg tcgaacagat gcggcggcca
     3721 cgcccaggaa ccgtcggaac gtactttcag ataattgagc gagccggcgt tgcaggccgc
     3781 gatctcgggc ttgacggcgc gcaggcaggc gagggggcca gaaatgtccg gccccatggt
     3841 gccggtcgtc tcgttgagga tcacgcccgg gcaagcgtcg cggatcgcct gcatgatggc
     3901 gaccgcaagc tccggttccc aggacggcag atggcccttg ccggggccct gctggcggaa
     3961 gtgcacatgc atcaccgcgg cgccggcgtc gaacgcggcc ttcgcctcgc gcgccatctc
     4021 ttccggggtg accggcacgt gatgctgctt gggatcggtg agcacgccgg tgagcgcgca
     4081 ggtgatcacg gccttgtcgt tcatggcgtt tcctccgtcc ggcgttcttg ggccgtggcc
     4141 ggctccggcg cgagcacggc aaggacctgg cgcgttgcca cctggtcgcc cggcttgacc
     4201 aaaatctcgc cgaccgtgcc gtcgcgctcg gcgccgatct cgtgctgcat cttcatcgcc
     4261 tcgagcacga cgatacgctg cccgcggctg acgcgatcgc ccggtttggc gaacaccgcg
     4321 acgatcgcgc cgttcatcgg cgccaccaac cgccccgatc tttcgcggcg ggcggcgcct
     4381 gcggcctcga gcggcgtctc ccgcactgcg atcgtcgtgc cgttaaggtc gagatgcagc
     4441 acgtcatcgc tcaaggcaaa gcgtgcggtc tgctgcaggc ccatggccgt gaagcggacg
     4501 ctgccgtttt gacgctcgac gacggcgatg tcgatggtgc gatcgttcag cgtcaccgcg
     4561 tagcgatcga tcccggcggt ggcgatgttc gcgacatggg gcgtatcatc gagcgtcagc
     4621 cgcaacggcc aagcggctgc gccggtggag aaccagcgcg ccgacgcgct cgaaacctcc
     4681 gtcgcgcgtg cgcgcgcctc gaacatcagt accgccgcga gcccgagcag gcgtgcgtcc
     4741 ggcgccgcgc ggcgcatggc gtcgcttccc gcaggaaaa
//
LOCUS       DATMQB010000314         2061 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1371377, whole genome shotgun sequence.
ACCESSION   DATMQB010000314 DATMQB010000000
VERSION     DATMQB010000314.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2061)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2061)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2061
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1371377"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            2..>2061
                     /locus_tag="VNY79_09110"
     CDS             2..>2061
                     /locus_tag="VNY79_09110"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HWX72646.1"
                     /translation="MAPSDYDAESIKVLKGLDAVRKRPGMYIGDTDDGSGLHHMVYEV
                     VDNAIDEALAGFAKDVVITLNPDGSCTVRDDGRGIPTDIHKGEGVSAAEVIMTQLHAG
                     GKFDQNAYKVSGGLHGVGVSVVNALSAWLKLTVWRDGQEHFMEFRHGEAVAPLAVVGA
                     AYDKRGTEVTFLPSKKTFTMCEFDFATLEHRLRELAFLNSGVTIVLSDMRHAVEKREE
                     MRYEGGVEAFVKYLDRNKTPLIPQPILMKAERDGIGVDCALWWNDGYHETVLCFTNNI
                     PQRDGGAHLAGFRGALTRQVTGYAESGGVARKEKVALTGDDCREGLTAVLSVKVPDPK
                     FSSQTKDKLVSSEVRPVVEGVINDMLKAWFEEHPGEAKVIVGKVIQAAAAREAARKAR
                     EMTRKSALGVTSLPGKLADCQERDPAKSELFIVEGDSAGGSAKQGRNREFQAVLPLRG
                     KILNVERARMDKMLSSEQIGTLITALGTGIGTDEFTVDKLRYHKIIIMTDADVDGAHI
                     RTLLLTFFYRQMRELIDRGHLYIAQPPLYKVTRGKSEQYLKDERALEDYLIDTGLEET
                     ALRLSSGEVRAGNDLRKLVEEARTIRNLLNGLHSRYSRKVIEQAAIAGVLHPRVTGDP
                     VNAAAAAEYIARRLDALTEETERGWTGQFNEHGFQFERTLRGVKEVAVIDQALLGSAD
                     ARRL"
BASE COUNT          395 a          695 c          659 g          312 t
ORIGIN      
        1 cattgcaccc tccgactacg acgcggaatc gatcaaggtg ctcaaggggc tcgatgccgt
       61 gcgcaagcgg ccgggcatgt atatcggcga caccgatgac ggctccggcc tgcaccacat
      121 ggtctacgag gtcgtcgaca acgccatcga cgaggcgctg gcgggcttcg ccaaggacgt
      181 ggtgatcacg cttaatcccg acggttcctg caccgtgcgc gacgacggcc ggggcatccc
      241 gaccgacatc cacaagggcg agggcgtatc ggcggccgaa gtcatcatga cgcagcttca
      301 cgccggcgga aaattcgacc agaacgccta caaggtttcg ggcggcctgc atggcgtcgg
      361 cgtttccgtc gtcaatgcgc tctcggcctg gctcaagctc acggtctggc gcgacggcca
      421 agaacacttc atggagttcc gccacggcga agccgtcgcg ccgctcgcgg tggtcggcgc
      481 cgcctacgac aagcgcggca ccgaggtcac gttcctgccg tcgaaaaaaa cgttcacgat
      541 gtgcgagttc gacttcgcga cgctggagca ccggctgcgc gagctcgcgt tcctcaattc
      601 cggcgtcacc atcgtgctct ccgacatgcg ccacgcggtc gagaagcgcg aggagatgcg
      661 ctacgagggc ggcgtcgagg cgttcgtcaa atatctcgat cgcaacaaga cgccgctcat
      721 cccgcagccg atcctcatga aggccgagcg cgacggcatc ggcgtcgatt gcgcgctgtg
      781 gtggaacgac ggctatcatg agacggtgct ctgcttcacc aacaacattc cgcagcgcga
      841 cggcggcgcc cacctcgccg gcttccgcgg ggcactcacc cgccaggtca ccggctacgc
      901 cgaatccggc ggcgtcgcgc gcaaggagaa agtcgcgctc accggcgacg actgccgcga
      961 ggggctgacc gcggttcttt cggtaaaagt gcccgatcca aaattctcct cgcagaccaa
     1021 ggacaagctc gtctcatccg aggtgcgccc ggtggtcgaa ggcgtcatca acgacatgct
     1081 caaggcgtgg ttcgaggagc atccgggcga agcgaaggtg atcgtcggca aggtgatcca
     1141 ggccgcggcg gcgcgcgaag ccgcgcgcaa ggcccgcgag atgacgcgga aaagcgcgct
     1201 cggcgtcacc tcgctgccgg gcaaactcgc cgattgccag gagcgcgatc cggccaagtc
     1261 ggaactgttc atcgtcgagg gcgattcggc cggcggcagc gccaagcagg ggcgcaaccg
     1321 cgaatttcaa gctgtgctgc cgttgcgcgg aaaaatcctc aacgtcgaac gcgcgcgcat
     1381 ggacaagatg ctctcgtccg agcagatcgg cacgctgatc accgcgctcg gcaccggcat
     1441 cggcaccgac gagttcacgg tcgacaagct gcgctaccac aagatcatca tcatgaccga
     1501 cgccgacgtc gacggcgccc atatccgcac gctgctgctg accttcttct accggcagat
     1561 gcgcgagctc atcgatcgcg gccatctcta catcgcgcag ccgccgctct acaaagtgac
     1621 ccgcggcaag tccgagcagt acctcaagga cgagcgggcg ctcgaggatt atctgatcga
     1681 caccggcctc gaagagacgg cgttgcgcct gtcctccggc gaagtgcgcg ccggcaatga
     1741 cctgcgcaag ctcgtcgagg aagcgcgcac catccgcaac ctgctcaacg gtctgcacag
     1801 ccgctatagc cgcaaggtga tcgagcaggc cgcgatcgcc ggcgtgctgc atccgcgggt
     1861 caccggcgat ccggtcaatg ccgcggcggc ggccgaatac atcgcccggc ggctcgacgc
     1921 cctgaccgaa gagaccgagc gcggctggac cgggcaattc aacgagcacg gttttcagtt
     1981 cgagcgcacc ttgcgcggcg tcaaggaagt cgcggtgatc gaccaggcgc tcctcggctc
     2041 cgccgatgcg cgccggctcg a
//
LOCUS       DATMQB010000315         6027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2923720, whole genome shotgun sequence.
ACCESSION   DATMQB010000315 DATMQB010000000
VERSION     DATMQB010000315.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6027
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2923720"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..765
                     /locus_tag="VNY79_09115"
     CDS             <1..765
                     /locus_tag="VNY79_09115"
                     /EC_number="5.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0009982 - pseudouridine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0001522 - pseudouridine synthesis [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HWX72647.1"
                     /translation="KPKNLVVHPAAGNWTGTLVNALIAHCGESLSGIGGERRPGIVHR
                     LDKDTTGLMVVAKSDRAHRALAAQFADHGRSGEPFERAYLAFVWGAPDRPRGTIDRPI
                     DRHPQARDRMAVRQGGREAITHWEVLERYGTADGPRAAAGRSTRPREPVASLLLCRLE
                     TGRTHQIRVHLASIGHPLLGDEVYGTGFRTKSVLLPQQAQGALKALGRQALHAHILSV
                     KHPKSAEILRFRSELPPDLARLRRELAAMQADSSEK"
     gene            964..1866
                     /gene="rpoH"
                     /locus_tag="VNY79_09120"
     CDS             964..1866
                     /gene="rpoH"
                     /locus_tag="VNY79_09120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoH"
                     /protein_id="HWX72648.1"
                     /translation="MAQTAALPILSGETGLTRYLEEIRRFPMLEPQEEYMLAKRWREH
                     GDRDAAHRLVTSHLRLVAKIAMGYRGYGLPISEVISEGNVGLMQAVKRFEPEKGFRLA
                     TYAMWWIKAAIQEYILRSWSLVKMGTTANQKKLFFNLRKAKSRISALDEGDMRPDQVK
                     LIAKRLGVTEQDVIDMNRRLGGDASLNAPIREDGDSGEWMDWLVDDGASQESRLADSE
                     QAENRHKALGEALTVLNDRERRIFEARRLADDPITLEELADEFGVSRERVRQIEVRAF
                     EKVQKAVKSRIASMENPEAAMAAQ"
     gene            complement(1943..2665)
                     /locus_tag="VNY79_09125"
     CDS             complement(1943..2665)
                     /locus_tag="VNY79_09125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX72649.1"
                     /translation="MPHDAPRPLLEVAGIAAGFRRLQVLWGVDLVVHEHESVVLLGAN
                     GAGKTTLLKAIMSLVEVWAGRIDFADENITRLRTDQRVQRGIVFMSETSGFPGLTVEE
                     NVLIGAQFLPANRARGRIDELYAIFPALAERRRLPAGSLSGGQRKMLGIAKALVGNPR
                     LLVMDEPSAGLSPLYVKEVIAVLAQFRAKQLALLIAEQNVKFLVLADRVYTLDNGRIG
                     FSGTVAAMQENDALRRAYFGLK"
     gene            complement(2655..3341)
                     /locus_tag="VNY79_09130"
     CDS             complement(2655..3341)
                     /locus_tag="VNY79_09130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX72650.1"
                     /translation="MKRFGGFRALDVLSFKVAAGEILGLVGPNGSGKTTCINVISGLY
                     PPDGGTVHFAGRSIGGWPSHRLVHAGINRTFQVPKPFLTLTVRENVEIAKTYGDSRDA
                     PSVEALLSALDLAGFAGHAAGELNTAQQKMLDLARALATGPRLLLIDELAAGLNPAEL
                     ERVAAKLRELASSGIALLVVEHLMGFIDQITDRIIVMNAGKEIFEGRLAEASRNRQVV
                     EVFLGDENAA"
     gene            complement(3370..4290)
                     /locus_tag="VNY79_09135"
     CDS             complement(3370..4290)
                     /locus_tag="VNY79_09135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX72651.1"
                     /translation="MPRIAWHLLLILLPVVAAFAILPGLYSNHLMLFNFIIFMTLAQG
                     INVIYGFTGYLPFGYVGFFGAGAYGFSLMVIHLHAPPLIALPVGAAAAIVLALLLTPL
                     FRLSGAYFSIANLAAALAVLQVVSNPNLEEITKGPYGISLSGVFDPALSYATALAVLA
                     ATLALVIYLRNSHFGMALKAIREDPISAGMAGINVVRERVIAWLLSALIAGLAGGVFA
                     WYVSVFYPETVFSVEFTIFAIVFALFGGNATVIGPILGVVILYGIYNAVGISTPQYFQ
                     LLYGALIMGLVMFLPNGLVSLLQRWGIDVP"
     gene            complement(4283..4642)
                     /locus_tag="VNY79_09140"
     CDS             complement(4283..4642)
                     /locus_tag="VNY79_09140"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX72652.1"
                     /translation="MDNREEAVATGINVHRISALAFGIGIGLAAIAGVFAPFMLGSIT
                     PAMGGEVTVTAFAVIIIGSLGNPLGTVLGGVIYGVSYMLMQSYYSSWANLLPYVLLIA
                     ILLVRPSGLLGRQVRRA"
     gene            complement(4642..5205)
                     /locus_tag="VNY79_09145"
     CDS             complement(4642..5205)
                     /locus_tag="VNY79_09145"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72653.1"
                     /translation="MLLYSVLAGVLFGLYFSLIGLGLNLVFGVMRIVNLAHGDFLMLG
                     AFLAFWLFALFAVNPVPVLPIAFAVFVAVGLPLYYLLVPRLLKAKDPEMLSFILFFGL
                     SQVIEAVTTIAFGTSERSIPGDQLGRAVAAVEGVFIGHEVENGPVEILGQTFPAAWVA
                     SGIASGCAVVLVYLYLTGPGSATSPAQ"
     gene            complement(5253..>6027)
                     /locus_tag="VNY79_09150"
     CDS             complement(5253..>6027)
                     /locus_tag="VNY79_09150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008963012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX72654.1"
                     /translation="KPLADFLTQDGPPLGIKRVAVLYATNDFTGTQASAVRKFIKESN
                     SGVEIVFDQGVPTETSNYTVLLNNIRAANPDAVLHLGYAPNDIAFLRNVQDSGVKFKL
                     LFCVYPGIETELLEKNLGSKALNYVFTYVPSSQIAYETNFGMSLKEYSAEWHKKYANA
                     QVEFGFNSVAGYTTGLVLEKTLATATSLEQLELRRAMFSLSGNLKTLDGTFELDPTGA
                     QIGEITPLGQLVVDDHDHLKIVTVWPHAVATGKPIYPRP"
BASE COUNT         1184 a         1913 c         1978 g          952 t
ORIGIN      
        1 aagcccaaga acctcgtcgt acatcccgcc gccggcaatt ggaccggaac gctcgtcaac
       61 gcgctcatcg cccattgcgg cgagagcctg tccggcatcg gcggcgagcg gcgtcccggc
      121 atcgtgcatc ggctcgacaa ggatacgacc ggcctcatgg tcgtagcgaa gagcgaccgc
      181 gcgcaccgcg cgctcgcggc acagttcgcc gaccatggcc gcagcggcga gccgttcgag
      241 cgcgcctatc tcgccttcgt ctggggagca ccggatcggc cgcgcggcac catcgaccgg
      301 ccgatcgacc gtcacccgca ggcgcgcgac cgcatggcag tgcgccaggg cgggcgcgag
      361 gcgataaccc actgggaagt gctcgaacgc tacggcacgg cggacgggcc tcgcgcggcg
      421 gcagggagaa gcacgcggcc acgagagcca gtcgccagcc tgctcctgtg ccgcctcgaa
      481 accggccgca cccaccagat tcgggtgcat ttggcctcga tcggacatcc cttgctgggc
      541 gacgaggttt acgggacggg ttttcgcacc aagagcgtgc ttttgccgca gcaagcccag
      601 ggcgcgctca aggcccttgg cagacaggcc ctccatgccc atatcttgtc agtcaagcat
      661 cccaagagcg ctgaaatcct tcggttccga tcggaactgc cgcctgatct cgcccgtttg
      721 cgtagggagc tggcggccat gcaggctgat tccagcgaga aataagagtt ttaccgggtt
      781 tatcccggcc aatggggatc aaggccgcgt cgcgccgaag tgatacgggg ttcacttcca
      841 ctggcccgac tcgaccgtgt atgttgcggg tgcgagatgg gaactttccg ccgtcggctc
      901 ggggagcgac ggcatcagat cgcccgccgt catgcggggg cgttgccttg gagggcgctg
      961 tcaatggccc agactgcagc tttgccaatc ctgtcgggtg aaaccggcct gactcggtat
     1021 ttggaagaga ttcggcggtt cccgatgttg gaaccgcagg aggaatatat gctggccaag
     1081 cgctggcgcg agcacggcga ccgcgatgcg gcgcatcggc tcgtcaccag ccatctgcgg
     1141 ctcgtggcca agatcgccat gggctaccgc ggctatggcc tgcccatttc cgaagtgatc
     1201 tccgagggca atgtcggcct catgcaggcc gtcaagcgct tcgagccgga gaagggcttc
     1261 cgcctcgcca cctatgccat gtggtggatc aaggcggcga tccaggaata catcctgcgc
     1321 tcctggtcgc tggtgaagat gggcacgacc gccaaccaga agaagctgtt cttcaacctg
     1381 cgcaaggcca agagccggat ctcggcgctc gacgaaggcg atatgcggcc cgaccaggtc
     1441 aagctgatcg ccaagcggct gggcgtgacc gagcaggacg tgatcgacat gaaccgccgg
     1501 cttggcggcg acgcctcgct caacgcgccg atccgcgaag acggcgattc cggcgaatgg
     1561 atggattggc tggtcgacga cggcgccagc caggaaagcc gcctcgccga ttccgagcag
     1621 gccgagaacc ggcacaaggc cttgggcgag gcgctgaccg tgctcaacga ccgcgagcgc
     1681 cgcatcttcg aggcgcgccg cctcgcggac gacccgatca cgctcgagga actcgccgac
     1741 gagttcggcg tctcacgcga gcgggtgcgg cagatcgagg tccgcgcctt cgagaaggtg
     1801 cagaaggcgg tgaagagccg catcgcctcg atggagaatc cggaagccgc catggcggcg
     1861 cagtgatcct tctttctccg gtccgccgga gcgagcggcg gcgggcgcca aaatcgccgc
     1921 tgtagagcgc gctccttcac gcctacttca gtccgaaata ggcgcggcgc agcgcatcgt
     1981 tctcttgcat ggcggcgacg gtgccggaaa agccgatgcg gccattgtcg agggtataga
     2041 cgcggtcggc gagcaccagg aatttcacgt tctgctccgc gatcaacagc gccaactgct
     2101 tcgcgcggaa ctgcgccagc accgcgatca cttccttcac atagagcggt gacaagccgg
     2161 ccgacggctc gtccatgacc agaagccgcg ggttgcccac cagcgccttg gcaatgccga
     2221 gcatcttgcg ctggccgccg gacaagctgc cggccggcag ccgccggcgc tcggccagcg
     2281 cggggaatat agcgtagagt tcgtcgatcc gcccgcgcgc gcggttcgcc ggcaagaatt
     2341 gcgcgccgat caggacattc tcctcgacgg tcagacccgg aaaacctgag gtttccgaca
     2401 tgaacacgat gccgcgctgc acccgctgat cggtgcgcag ccgggtgatg ttctcgtcag
     2461 cgaaatcgat gcgtccggcc caaacctcga ccaggctcat gatcgctttg agcagcgtcg
     2521 tcttgccggc gccgttggca ccgagcagca ccaccgattc atgctcgtgc acgacgagat
     2581 cgacgcccca cagcacctgc aaacgccgaa agccggcggc gatgcccgcg acttcgagca
     2641 gcggtcgcgg cgcgtcatgc ggcattctcg tctccgagga agacttcgac gacctgcctg
     2701 ttccgcgacg cctccgccag ccggccttcg aaaatctcct taccggcgtt catgacgatg
     2761 attcgatcgg tgatctgatc gatgaatccc atcaggtgct cgacaacgag aagggcaatt
     2821 cccgagcttg ccagctccct gagtttggcg gcgacgcgct ccagttccgc tggattcagt
     2881 ccggccgcaa gctcatcgat caacaaaagc cgcggaccgg tcgcgagcgc ccgcgcgaga
     2941 tcgagcattt tctgctgcgc ggtgttgagc tcgcccgcgg catgaccggc gaagccggca
     3001 agatcgagcg cggacaggag cgcctccaca ctgggcgcgt cgcggctgtc tccgtaggtc
     3061 ttcgcgatct cgacgttctc gcgcacggtc agcgtgagga acggcttcgg cacctggaag
     3121 gtacggttga tgcccgcgtg cacgagccgg tgcgacggcc agccgccgat cgagcgtccg
     3181 gcgaaatgaa ccgtgccgcc gtccggcggg taaagcccgg agatgacatt gatgcacgtg
     3241 gtcttgccgg agccgttcgg cccgaccagg ccgagaattt cgccggcagc gaccttgaag
     3301 ctaagaacat ctagcgcgcg gaagccgccg aagcgcttca ccaaacgatc gacagcgaga
     3361 agcggcgcgt caggggacat cgatgcccca tcgctgcaat aacgacacca gcccgttggg
     3421 caggaacatc accagcccca tgatcagcgc gccgtagagc aattgaaaat attgcggcgt
     3481 cgagatgccg accgcgttgt agatgccgta gaggataacg acgccgagga tcggcccgat
     3541 caccgtggca ttgccgccga acagcgcgaa cacgatggca aagatcgtga actcgacgct
     3601 gaaaaccgtc tccggataga acaccgacac gtaccaggcg aaaaccccgc cggcgaggcc
     3661 ggcgatcagg gcgctcaaga gccaggcgat gacgcgctcg cgcacgacat tgatgccggc
     3721 catgccggcg ctgatcggat cctcgcgaat ggccttgagc gccatgccga agtgcgaatt
     3781 gcgcagatag atcacgagcg cgagcgtcgc cgcgaggacc gcgagcgcgg tggcgtagct
     3841 cagcgccgga tcgaagaccc cgctgagact gatgccgtag gggcccttgg tgatctcttc
     3901 cagattcggg ttcgacacca cctgcagcac ggcgagcgcg gcggcaagat tggcgatcga
     3961 gaaataggct cctgacaggc ggaacagcgg cgtcagcagc agcgccagca cgatggcggc
     4021 ggcggcgccg acgggaagcg cgatgagcgg cggcgcatgc aggtggatca ccatcagcga
     4081 gaagccgtag gcgccggcgc cgaaaaagcc gacatagccg aacggcagat agccggtgaa
     4141 cccgtagatc acgttgatgc cctgggcgag cgtcatgaag atgatgaaat tgaacagcat
     4201 caggtgattg ctgtagaggc cgggcaggat cgcgaacgcg gcaacgaccg gcagcagaat
     4261 caacagcaga tgccacgcaa tcctaggcac ggcgcacctg tcgtccgagc aggccgctgg
     4321 gccgcaccaa aaggatcgcg atgagcagga cgtagggcag gagattggcc cacgagctgt
     4381 agtagctctg catcagcatg taggagacgc cgtagattac tcctcccagc accgtgccga
     4441 gcgggttgcc cagcgagccg atgatgatga cggcaaatgc cgtcacggtc acctccccgc
     4501 ccatcgccgg ggtgatgctg ccgagcatga agggtgcgaa gacgccggcg atagccgcaa
     4561 gcccgatgcc gatgccgaag gcgagcgccg atatgcgatg gacgttgatc ccggtcgcga
     4621 ccgcctcctc gcggttgtcc atcactgcgc gggtgaggta gccgagccgg gtccggtaag
     4681 ataaaggtag acgagcacca cggcgcagcc gctggcaatg ccgctcgcca cccacgccgc
     4741 cgggaaagtc tggcccaaga tctcaaccgg accgttctcc acctcgtgcc cgatgaacac
     4801 cccctccacg gcggcgaccg cgcgtccaag ctggtcaccg ggaatcgagc gttcgctggt
     4861 gccgaaggcg atcgtcgtga ccgcttcgat cacttgcgag agcccgaaga agagaatgaa
     4921 cgacagcatt tccgggtcct tggccttcag gagccgcgga accaggaggt aatagagcgg
     4981 caacccgacg gccacgaaca cggcgaaggc gatcggaagg acgggtacgg gattgacggc
     5041 gaacagcgcg aacagccaga acgccaggaa ggctcccagc atcaaaaagt cgccgtgcgc
     5101 caggttgacg atgcgcatga cgccgaacac gagattgagc ccgagcccga tcagggagaa
     5161 atagaggccg aacaggacgc cggcgagcac actgtagagc agcattcagc gcgctccgcc
     5221 gccggccccg cttgcccccg gcccggccat ggtcatgggc gcggatagat gggcttcccg
     5281 gtcgcgaccg cgtgcggcca taccgtcacg attttcaggt gatcgtggtc gtcgacgacg
     5341 agctgcccca gcggagtgat ttcgccgatc tgtgcgccgg tcggatcgag ctcgaacgtg
     5401 ccgtcgagcg tcttgaggtt gcccgaaagg ctgaacatcg cccggcgcag ttcgagctgc
     5461 tcgaggcttg tcgccgtcgc cagcgtcttt tccagcacca gcccggtggt gtagccggcc
     5521 accgaattga agccgaactc gacctgggcg ttggcgtact tcttgtgcca ttcggcgctg
     5581 tattccttca gcgacatgcc gaaattggtc tcgtaggcga tctgcgagga tggaacgtag
     5641 gtgaacacgt agttcagggc cttgctgccg aggttcttct ccagcagctc ggtttcgata
     5701 cccgggtaga cgcagaacag gagcttgaac ttgacgccgc tgtcctggac gttgcgcagg
     5761 aaggcgatgt cgttcggcgc gtagcccagg tggaggacgg cgtcgggatt cgcggcgcgg
     5821 atgttgttga gcaacaccgt gtaattcgag gtctcggtcg ggacgccctg gtcgaaaacg
     5881 atttcgacgc cggaattcga ctccttgatg aacttacgca ccgcgctcgc ctgcgtgccg
     5941 gtaaaatcgt tggtggcgta gagcacggcg acgcgcttga tcccgagcgg cggtccgtcc
     6001 tgggtgagaa aatcggcaag cggcttc
//
LOCUS       DATMQB010000316         2544 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3845280, whole genome shotgun sequence.
ACCESSION   DATMQB010000316 DATMQB010000000
VERSION     DATMQB010000316.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2544
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3845280"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..794)
                     /locus_tag="VNY79_09155"
     CDS             complement(<1..794)
                     /locus_tag="VNY79_09155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007593991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HWX72655.1"
                     /translation="MKSYDVCECGAPLRLMERPTPKPTGTEVLLKVIAAGVCHSDLHI
                     WEGHYDLGGGKLLKLADRGVKLPLTMGHENVGEVVAVGPDAKGVKAGERRLVHPWLGC
                     GECAVCKRGDEQLCRTAFSIGVFRSGGYADHLLVPHPRYLFDMGNVAPERAAPLACSG
                     ITTYGALKKVGPLLQQESMVIIGAGGLGLMCLSLHGKMGGKGAIVVDIDPVKRQAALK
                     AGAVAAIDGNAPDAAKQIIEATKGGAWAVIDLVGAARTVQLALDSIV"
     gene            1043..>2544
                     /locus_tag="VNY79_09160"
     CDS             1043..>2544
                     /locus_tag="VNY79_09160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016779 - nucleotidyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase domain-containing
                     protein"
                     /protein_id="HWX72656.1"
                     /translation="MMHDTQRSARAVELIDSPAIVADLKALAAAHAGRELRSAVAQRL
                     KSALTQARARAEDLLLKDRHGRHCAERLCGMQDEIIRILFEFAAGELYPLQVRSQAER
                     MAVVATGGYGRGLLAPSSDIDLLFLLPYKQTAWGESVAEVLLYCLWDMGLKVGHATRS
                     VNECIRQAKADMTIRTALLESRHLFGDAKLYGELTARFDKEVAQGTAPEFVAAKLAER
                     EERHRRAGQSRYLVEPNVKDGKGGLRDLHTLFWIAKYVYRAHEPEELIACGVFDRDEY
                     NLFRRCEDFLWSVRCNMHFLAGRAEERLSFDIQREIAVRLGYTEHPGLKDVERFMKHY
                     FLTAKHVGDLTAILCAGLEEREAKPAPVLSRMMARLRPARSRRTLSETDDFTVDNNRI
                     NIARADVFRRDPVNLIRLFHLAQKHNLAFHPEAMRSATHSLKLIDAKVRGDAEANRLF
                     LDILTSKTEAETVLRRMNEAGVLGEFVRAFGRVVAMMQFNMYHHYTVDEHL"
BASE COUNT          423 a          906 c          794 g          421 t
ORIGIN      
        1 acgatgctgt cgagggcaag ctgcactgtg cgcgcggcgc cgacgagatc gatcaccgcc
       61 cacgctccgc ccttcgtcgc ctcgatgatc tgcttggccg catccggcgc attgccgtcg
      121 atcgccgcca ccgcgccggc cttgagcgcc gcctgccgct tgaccgggtc gatgtcgacg
      181 acgatcgcgc ccttgccgcc catcttgccg tgcagcgaca gacacatcag cccgagcccg
      241 ccggcgccga tgatgaccat cgactcctgc tgcaacagcg ggccgacctt cttcaacgcg
      301 ccgtaggtgg tgatgcccga acaggcgagc ggcgccgccc gttccggcgc gacgttgccc
      361 atgtcgaaca gatagcgcgg atgcggcacc agcaaatgat cggcatagcc gccggagcgg
      421 aacacgccga tgctgaacgc cgtgcggcaa agctgctcgt cgccgcgctt gcagaccgcg
      481 cattcgccgc agccgagcca tggatgaacg agccggcgtt cgcccgcctt gacgcccttg
      541 gcgtctgggc cgacggcgac gacttcgccg acgttttcgt gtcccatggt cagcggcagc
      601 ttgacgccgc ggtcggcgag cttgagcagc ttgccgccgc cgagatcgta gtggccctcc
      661 cagatatgca gatcgctgtg gcagacgccg gcggcgatga ccttgagcag gacctcggtc
      721 cccgtgggct tcggcgtcgg ccgctccatc agccgcagcg gtgccccgca ttcacagaca
      781 tcatagcttt tcatcggacc tgatcctccc gttcatcttt aactgcttct cgacgcgttc
      841 gccgtagcat ggggtacggg tacacggcgg aagataaatg ttataccaac cttgcgcgca
      901 ggacgatgat gtattcgccg caggagaacc tatgtagccc gcattgagcg aagcgccatg
      961 cgtcaacgcc gcgggcccgg catctgattg tcggattccg cttcgcccca ctcgggctcc
     1021 gttacacgac cccagctctt gcatgatgca cgatacccaa cgctccgcgc gcgccgtcga
     1081 attgatcgac agcccggcaa tcgtcgccga cctcaaggcg ctcgccgccg cgcacgccgg
     1141 gcgcgagctg cgcagcgccg tggctcagcg cctgaaatcg gcgctcaccc aggcccgggc
     1201 gcgcgccgag gacctgctgc tcaaggaccg ccacgggcgg cactgtgccg agcggctctg
     1261 cggcatgcag gacgagatca tccgcatcct tttcgagttc gccgccggcg aactttatcc
     1321 gctgcaggtc cgctcgcagg ccgagcgcat ggccgtggtc gcgaccggcg gctacggccg
     1381 cggcctgctg gcgccgagtt ccgacatcga tctcctgttc ctcttgccgt acaagcagac
     1441 cgcctggggc gagtcggtcg ccgaagtgct gctctattgc ctgtgggaca tgggcctcaa
     1501 ggtcgggcac gccacgcgct cggtcaacga atgcatccgc caggccaagg ccgacatgac
     1561 catccgcacg gcgctgctcg agtcgcggca tctgttcggc gacgccaagc tctacggcga
     1621 gctcaccgcg cggttcgaca aggaggtcgc gcaggggacg gcgccggaat tcgtcgccgc
     1681 caagcttgcc gagcgcgagg agcgtcaccg ccgcgccggc cagtcgcgct atctcgtcga
     1741 gcccaatgtc aaggacggca agggcggcct gcgcgacctg cacacgctgt tctggatcgc
     1801 caaatacgtc taccgcgcgc acgagcctga ggagctgatc gcctgcggcg tgttcgaccg
     1861 cgacgaatac aatctgttcc gccgctgcga agatttcctg tggtcggtcc gctgcaacat
     1921 gcatttcctc gccggccgcg ccgaggagcg gctttcgttc gacatccagc gcgagatcgc
     1981 ggtgcggctc ggctacaccg agcatcccgg gctcaaggac gtcgagcgct tcatgaagca
     2041 ctatttcctc accgccaagc acgtcggcga cctcaccgcc atcctctgcg ccggcctcga
     2101 ggagcgcgag gccaagcccg cgccggtgct cagccgcatg atggcgcgcc tgcgcccggc
     2161 gcgcagccgg cgcaccctga gcgagaccga cgacttcacc gtcgacaaca accgcatcaa
     2221 catcgcccgc gccgacgtct tccggcgcga tccggtcaat ctgatccggc tgtttcactt
     2281 ggcgcagaag cacaatctgg cgttccaccc cgaagccatg cgctcggcca cccactcgct
     2341 caagctgatc gatgccaagg tgcgcgggga cgcggaggcg aaccggctgt tcctcgacat
     2401 cctgacctcg aagaccgagg cggagacggt gctccggcgc atgaacgagg ccggcgtgct
     2461 cggcgaattc gtgcgcgcct tcggccgcgt cgtggcgatg atgcagttca acatgtacca
     2521 ccactatacg gtggacgagc atct
//
LOCUS       DATMQB010000317         4985 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4154091, whole genome shotgun sequence.
ACCESSION   DATMQB010000317 DATMQB010000000
VERSION     DATMQB010000317.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4985)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4985)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4985
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4154091"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..427)
                     /locus_tag="VNY79_09165"
     CDS             complement(<1..427)
                     /locus_tag="VNY79_09165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="four-carbon acid sugar kinase family protein"
                     /protein_id="HWX72657.1"
                     /translation="MTPLGCIADDYTGASDLANTLTRCGLRTVQAIGIPADSLTLPDV
                     SVVVVSLKIRSIAAAEAVAQARAADAWLRKRGASHVMYKICSTFDSTDDGNIGPVLDA
                     LRTDAGEAIAVVTPAFPETARTVYQGNLFVGALPLNESPL"
     gene            complement(424..1233)
                     /gene="otnI"
                     /locus_tag="VNY79_09170"
     CDS             complement(424..1233)
                     /gene="otnI"
                     /locus_tag="VNY79_09170"
                     /EC_number="5.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016853 - isomerase activity [Evidence
                     IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo-tetronate isomerase"
                     /protein_id="HWX72658.1"
                     /translation="MPRFAANLTMMFNEWSFLDRFDAAADAGFVAVEFLFPYDHSPDA
                     IARCLSRNGLTLALFNLPPGDWAAGERGFAALPDRFADLQRGMETALPFVRATGVKRV
                     HLMAGIASDHDPRSGQAYRTAAAWTAERVAREGLDLVVEPINSRDMPGYYLNDFRLAE
                     TVIGELALPNLKLQFDIYHRQIMHGDVTIALRRLMPIVGHVQIASVPSRNEPTAEELN
                     YPFLFDELDRLGYSGFVGCEYRPRGKTIEGLGWFSPWRRKGSLVGTAGAPS"
     gene            complement(1656..2261)
                     /locus_tag="VNY79_09175"
     CDS             complement(1656..2261)
                     /locus_tag="VNY79_09175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00730 family Rossman fold protein"
                     /protein_id="HWX72659.1"
                     /translation="MSKINALCVYCGSNPGTDAAFVKAAHDFGKILGENGLRLIYGGG
                     SIGLMGALAASVIEHGGEVTGIIPEFLTAAERPRRLAQELIVTHDMHERKRTMFERAD
                     AFVALPGGLGTLEELVEQMTWAQLGRHKKPILVANINGFWDPLLGLIAHMRALALVPS
                     PAQGVNLLVADRIEDILPKLREAARAVVAAEKKMAVPADRM"
     gene            2441..4390
                     /locus_tag="VNY79_09180"
     CDS             2441..4390
                     /locus_tag="VNY79_09180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HWX72660.1"
                     /translation="MIDFQRPTEHLKRDVSGQGGALFATLLHLWPYIWPADRRDLKNR
                     VVFASALIFAAKFATIAVPFTFKWATDALAGRGTAPVAPDNWLAWTLASPVLLTLAYG
                     GTRILMGVLTQWRDGIFAKVAMHAVRRLAMLTFEHMHLLSLRFHLERKTGGLTRVLER
                     GRNGIETIVRMVLLQLAPTVVEVVLIVWVLLFHFDWRYVMVIVCTVALYVGFTFYATE
                     WRIGIRRKMNESDTDANAKAIDSLLNYETVKYFSAEDREAKRYDCSMARYEDASVKAY
                     TSLAVLNAGQAIIFAFGLAGAMVLCATGVERGTNTVGDFVMINAMMIQLYQPLNFMGL
                     LYREIKQAVIDIKIMFAILERKPEIEDAEDAGALKVRAGTIRFENVSFAYEPARPILK
                     GLNFEVPAGHTVAIVGPSGAGKSTLSRLIFRFYDVSGGRILIDGVDVREVTQASLRAA
                     IGMVPQDTVLFNDTIRYNIRYGRWDASDAAVEEAARLAQIDGFIRLSPKGYETEVGER
                     GLKLSGGEKQRVAIARTILKAPPILLLDEATSALDSHTEKDIQDALDRVAKNRTTLVI
                     AHRLSTIVGADEILVLDQGMIVERGTHHQLLLQGGLYASMWNRQREAQMARDILAEVE
                     AEKVAPNRNPPEVEELLPAAADAAE"
     gene            4408..>4985
                     /locus_tag="VNY79_09185"
     CDS             4408..>4985
                     /locus_tag="VNY79_09185"
                     /EC_number="4.1.1.65"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012043609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004609 - phosphatidylserine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylserine decarboxylase"
                     /protein_id="HWX72661.1"
                     /translation="MSVINSIRSQLAPIHPQGYPFVGSFALASIILFWLWPPFGWLGT
                     VVTLWCAYFFRDPPRVTPAREGVVVAPADGRISRIANAPPPKELELGDRPLIRISIFM
                     SVFDCHVNRSPVGGRIERMVYHSGAFLNADLDKASEANERNSFVIVTATGVRFAVVQI
                     AGLVARRIVPFVREGAAIGAGQRIGMIRFGSRV"
BASE COUNT          911 a         1632 c         1548 g          894 t
ORIGIN      
        1 tgagcggact ttcgttaagc gggagcgcgc cgacgaacag gttgccctga tagacggtgc
       61 gtgcggtctc gggaaacgca ggcgtgacga cggcgattgc ttcgccggcg tcggtgcgca
      121 gggcatccag caccggcccg atgttgccgt catcggtgga atcaaaggtt gagcagatct
      181 tgtacatgac gtggctcgcg ccgcgcttcc tgagccaggc gtccgccgca cgggcctgcg
      241 ccacggcctc ggccgcggca atggagcgga tcttcagcga cacgaccacg acactgacgt
      301 cgggaagagt aaggctgtcc gcaggaatcc cgatagcctg cacggttcgc aggccgcatc
      361 tggtaagcgt attggcgaga tccgacgctc ccgtatagtc atcagcaata cagccaagtg
      421 gagtcatgag ggtgctcccg cggtccccac aagactaccc ttgcggcgcc acggcgaaaa
      481 ccagccgagt ccctcgatcg tcttgccacg tggtcggtat tcgcatccga cgaaacccga
      541 atacccgagc cgatccagct catcgaacag gaacgggtaa ttcaattcct cggccgtcgg
      601 ctcattccga gaagggacac tcgcgatctg tacgtgccca acgatcggca tcaatcgccg
      661 gagcgcaatg gtcacgtcgc catgcatgat ctggcgatga tagatgtcga actgcaactt
      721 gagattcggc agggcaagtt cgccgatcac tgtttcagca agcctgaaat cgtttagata
      781 gtacccgggc atatcgcggc tgttgatcgg ctctacgaca aggtcgagcc cttcgcgggc
      841 aaccctttcc gcggtccatg ccgctgctgt ccgataggcc tggcccgatc ggggatcatg
      901 atcgcttgcg atcccggcca tgagatgcac acgtttgacg cccgtcgccc gtacaaacgg
      961 caatgccgtc tccatgccac gctgtagatc ggcaaaccgg tcgggaagcg cggcgaagcc
     1021 tcgctcacct gccgcccaat ctcccggagg caggttgaac agcgccagag tcaggccatt
     1081 tcgcgacaaa catcgcgcaa tcgcatccgg agagtgatca taggggaaga ggaactcgac
     1141 ggcgacaaag ccggcgtcgg ctgctgcatc gaaacgatcc agaaacgacc attcgttgaa
     1201 catcatcgtc aggtttgcgg cgaagcgcgg cattcgctgg ctcctatctg gtctcgggtt
     1261 agtcgccaac aagcgcgtcg atccagcacg agcgcgccgg accgaatccg atcgagtcga
     1321 gacgggtgac ggacgcgaac cggcagcgac aagatttcag gatcatggcc attttcgctc
     1381 ggcccgcctc gcgatgcgcg gcactgctaa acacttgcgc catccgtccg tatcgcagtg
     1441 gtgcctctag cggttgctct aaagcagcag cacgcactag cctgtcgaga tttagctgtg
     1501 aaacatgcca gtgactttcg gacgttcgtg ctacctatgt gcactcagtg ccagagtgct
     1561 attaggcccc cctttatagg acatgataat aaaaacattc tcccgaccat cacgctgaaa
     1621 ctctcccgca ggggagaggg ccagccctca agacatcaca tccggtcggc gggcaccgcc
     1681 atcttcttct ccgcggcgac gaccgcccgc gctgcttccc gcagcttcgg caaaatgtcc
     1741 tcgatgcggt cggcaacgag cagattgacg ccttgcgccg gggacgggac cagcgcgagc
     1801 gcgcgcatgt gcgcgataag gccgagcagc gggtcccaga agccgttgat gttggcgacc
     1861 aggatcggtt tcttgtggcg cccgagctgc gcccaggtca tctgctcgac gagttcctcg
     1921 agcgtgccga ggccgccggg cagtgcgacg aaagcatcgg cgcgctcgaa catcgtgcgc
     1981 ttgcgctcgt gcatgtcgtg ggtgacgatc agctcttggg cgagccgccg cggccgttcg
     2041 gccgcggtca gaaactccgg gatgatcccg gtcacttcac cgccatgctc gatcacggag
     2101 gcggcaagcg ctcccatcag gccgatggaa ccgccgccat agatcaggcg aaggccattt
     2161 tcgccgagga ttttgccgaa gtcgtgcgcc gccttgacaa aggccgcgtc agtccctggg
     2221 ttcgatccgc agtagacgca cagcgcattg attttgctca tagagtgaca ctcatgaaag
     2281 ggtagatgtg gcggcaattc gcccgcagcg caagctgttt gcgccgcgtg cgggcggcca
     2341 ggcgcgcgtg caggaacaat ggaaagcccc tatatgacaa tcacatggca tcgcaaacac
     2401 gcggcggccc ttggcggccc ttccgggccg taatttcttc atgatcgact ttcagcgacc
     2461 gaccgagcac ctcaagcggg acgtcagcgg ccaaggcggg gcgctgttcg cgacgctgct
     2521 gcacctgtgg ccctatatct ggccggccga ccgccgcgac ctcaagaacc gggtcgtgtt
     2581 cgccagcgcg ctcatcttcg ccgccaagtt cgcgaccatc gctgtgccgt tcaccttcaa
     2641 gtgggcgacc gacgcactcg ctggccgcgg taccgcgccg gtcgcccccg acaactggct
     2701 cgcgtggacg ctggcgagcc cggtgctgct gacgctcgcc tacggcggca cgcgcatcct
     2761 catgggggtg ctgacgcaat ggcgcgacgg catcttcgcc aaggtggcga tgcacgcggt
     2821 gcggcggctc gcgatgctga ccttcgagca catgcacctg ctgtcgctgc ggttccatct
     2881 cgagcgcaag accggcggcc ttacccgcgt cctcgaacgc gggcgcaacg gcatcgagac
     2941 aatcgtgcgc atggtgctgc tgcagctcgc gccgaccgtc gtcgaggtcg tcctgatcgt
     3001 ctgggtgctg ctgttccact tcgactggcg ctacgtgatg gtgatcgtct gcacggtcgc
     3061 gctctatgtc ggcttcacgt tctacgcgac cgagtggcgt atcggcatcc gccgcaagat
     3121 gaacgagagc gacaccgacg ctaacgccaa ggcgatcgat tcgctgctca actatgaaac
     3181 cgtcaaatat ttctccgccg aggaccgcga ggccaaacgc tacgattgct cgatggcacg
     3241 ctacgaggac gcgagcgtca aggcgtacac gtccctcgcc gtgctcaatg ccggccaggc
     3301 gatcatcttt gcctttgggc tcgcgggggc aatggtgctc tgcgccactg gcgtcgagcg
     3361 cggcaccaac acggtcggcg atttcgtcat gatcaacgcc atgatgatcc aactctatca
     3421 gccgctgaat ttcatggggc tgctctaccg cgagatcaag caggcggtga tcgatatcaa
     3481 gatcatgttt gcgatcctgg agcgcaagcc cgagatcgag gatgccgaag acgccggtgc
     3541 gctcaaggtg cgcgccggca ccatccgctt cgagaacgtg tcgttcgcct atgagccggc
     3601 gcggccgatc ctcaaaggcc tgaacttcga ggttccggcc ggccacaccg tcgccattgt
     3661 cgggccttcg ggcgccggca agtcgacgct ctcgcggctg atcttccgct tctacgacgt
     3721 gagcggcggc cgcattctta tcgacggcgt cgacgtccgc gaggtcacgc aggcatcgct
     3781 gcgcgccgcg atcggcatgg tgccgcagga tacggtgctg ttcaacgaca ccatccgcta
     3841 caacatccgc tacggccgct gggatgcgag cgacgccgcg gtcgaggagg cggcgcggct
     3901 ggcgcagatc gacggcttca tccggctttc gcccaaaggc tacgagacgg aggtcggcga
     3961 acgcgggctg aagctctccg gcggcgagaa gcagcgcgtc gccatcgccc gcaccatcct
     4021 caaggcgccg ccgatcctcc tgctcgacga ggcgacctcc gcgctcgaca gccacaccga
     4081 gaaggacatc caggacgcgc tcgaccgcgt ggcgaagaac cgcaccacgc tggtcatcgc
     4141 ccaccggctc tcgacgatcg ttggcgccga cgagattctc gtgctcgacc aggggatgat
     4201 cgtcgagcgc ggcacccatc atcagctgct gttgcagggc ggtctctatg ccagcatgtg
     4261 gaaccgtcag cgcgaggcac agatggcgcg cgatattctc gccgaggtcg aagcggagaa
     4321 ggtcgccccc aatcgcaacc cgcccgaagt ggaggagctt cttcctgccg cggcggatgc
     4381 cgccgaatga cgccgtagcg acgcgcaatg tccgtcatca attccatccg ctcgcagctc
     4441 gcgccgatcc atccgcaggg gtatcccttc gtcggcagct tcgcgctcgc gagcattatt
     4501 ttgttttggc tgtggccgcc gttcggctgg ctcggcacgg tcgtcacgct ctggtgcgcc
     4561 tacttcttcc gcgatccgcc acgggtaacg ccggcgcgcg agggcgtcgt ggtggcgccg
     4621 gcggacggcc gcatcagccg catcgccaac gccccgccgc cgaaggaact tgaactcggc
     4681 gaccggccgc tgatccgcat ctccattttc atgagcgtgt tcgactgcca cgtgaaccgc
     4741 agcccggtcg gcgggcgcat cgaacgcatg gtctaccact ctggcgcctt cctcaacgcc
     4801 gacctcgaca aggccagtga ggcgaacgag cgcaactcct tcgtcattgt gaccgcgacc
     4861 ggcgtgcgct tcgccgtcgt ccagatcgcc ggcctcgtgg cgcgccgcat cgtgccgttc
     4921 gtacgggagg gtgcggcgat cggcgccggg caacgcatcg gcatgattcg cttcggctcg
     4981 cgcgt
//
LOCUS       DATMQB010000318         5102 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2609284, whole genome shotgun sequence.
ACCESSION   DATMQB010000318 DATMQB010000000
VERSION     DATMQB010000318.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5102)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5102)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5102
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2609284"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(164..1525)
                     /locus_tag="VNY79_09190"
     CDS             complement(164..1525)
                     /locus_tag="VNY79_09190"
                     /inference="COORDINATES: protein motif:HMM:NF037981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="solute carrier family 23 protein"
                     /protein_id="HWX72662.1"
                     /translation="MTSVTPTEQAGSVMAAEGDRSGVTILKLRYALEDKPGAVATALF
                     GVQHVLVMFTGMIAAPLVIGQLLDLPPELRTNMLTGVMLGCGIGTTVSALGFGFVGAR
                     LPIVLGSHSVYIVAVVAMAKASSLAGASTAMMLGGLILFAASPVIGKMRALFPPVVIA
                     TLLVVTGITLIRIAVNIAGGTNTPYAGKPLVFAFAIGSVVLILAVNRLTTGFWRALSV
                     FIALVVLYLVAIPLGLADFAVVAKAPWFRLPSVLPYGSFTWPQTSGLITVLVFHLVAA
                     VYTMSITLALCRMLGVEGTERRVRGAVAADGLGSAVAALFGGVPLISYDQNVGAISLT
                     GVGSRFVVAAAGAILILMALVPKVGALIAIVPPFVLGGTLIFMFAMIAAVRVGMLADS
                     MRSQRDLLLLAASLGLAMAVDFAPPALFEALAPSVRILAADGIVVGTVMAVVLNLVLP
                     KKD"
     gene            complement(1542..2288)
                     /locus_tag="VNY79_09195"
     CDS             complement(1542..2288)
                     /locus_tag="VNY79_09195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009398857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX72663.1"
                     /translation="MSAPSASAPPALAVERLNAWYGAAQVLYDVAFTVGRGEVVALMG
                     RNGAGKSTTIKAVMGLLARRSGTVLLNGRNISALRPFEIARLGLGFTPEDRRIFSDLT
                     VMENLDAGRQPPRAFADGTPAPAWTCEILFRLFPNLAEMRHRLGGRMSGGEQQMLTIA
                     RTLMGNPLVVLLDEPSEGIAPVIVEEIADTIVELKKRGLSILLSEQNVGFAEIVSDRA
                     YMLEKGQIRWGGTMAELAENAEVQRSYLTL"
     gene            complement(2285..3055)
                     /locus_tag="VNY79_09200"
     CDS             complement(2285..3055)
                     /locus_tag="VNY79_09200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009398859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX72664.1"
                     /translation="MSELAVASLSKSFGAVRAVDDVSFAVARGEFLALIGPNGAGKST
                     CFNIINGQLKPDRGTIRFEDRDIAGLPPREICRRGIARTFQIAATFSSMTVAENVQMA
                     LIAHARETYGLWRRAASYHRARALELLRQVGMEEAADRPSRELAYGDVKRVELAIALA
                     SDPRLLLMDEPTAGMAPRERNDLIALVKALVVERGVSVLFTEHSMDVVFAFADRIVVM
                     ARGRLIADGDAKAVRGDPVVQQVYFGSGRTFERREVGS"
     gene            complement(3052..4935)
                     /locus_tag="VNY79_09205"
     CDS             complement(3052..4935)
                     /locus_tag="VNY79_09205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX72665.1"
                     /translation="MNWEGLAFQAVDGLASASGLFFVAAGLSLIFGVTRIINIAHGSL
                     YMLGTYIAVTLATAMNGALGFWGGIAAAALIVGVLGALIEIVLLRRIYVAPELFQLLA
                     TFALLLVINDAALWLWGPEDLLGPRAPGLRGAIEILGRRMPSYDAFLIIIAPVVLVLL
                     HAVFARTRFGRLVRAATEDREMLGALGVNQSVLFTAVFALGSVLAGLGGALQVAREPA
                     NLGIDLTVITDAFVVVVIGGMGSIVGSYVAAVLIAEVKALCIGIGLVSLGGFSVNFSK
                     LTLVAEFLVMALVLIARPQGLLGRPQLAARSGAEPEAPLRPASRAFALFGLAVFVVLA
                     ALPLLARSSPYTLVLGVDVLIAVLFATSLHFIMGPGGMHSFGHAAYFGLGAYGAALAV
                     KWFAAPMGVALATAPVAAALGALLFGWFAVRLSGVYLAMLTLAFAQIVWSIVFQWQEL
                     TGGSNGVLGIWPSVPFDRLSLFFLLTLVLVVAGVLLLRRILFAPFGYAMRAGRDSPLR
                     AEAIGIHVKRVHWLAFAVAGTVCGVAGGIFAFAKGSISPETISIGRSIDGLVMVLLGG
                     IQTLSGPIVGASVFAVLQDFVMQQTEYWHALLGGIILVLVLAFPSGLAGAFALLAGRL
                     RTS"
BASE COUNT          983 a         1692 c         1765 g          662 t
ORIGIN      
        1 gtcgtgacca ctccgatagc ctggctgatg cacaaatacg tcgagcggcc gggcgtcgcg
       61 ctcggccggc gcctggccgc ggttcagttc acggagtggc tgccgttgcg ccccgctccg
      121 gcggacctcg ccagccccca cgcatgaccg cgatagatcc gttttagtcc ttcttcggca
      181 gcacgaggtt gagcacgacc gccatcacgg tgccgaccac gatgccgtcc gcggcgagga
      241 tacgcactga cggcgcaagc gcctcgaaca aagcgggcgg ggcgaagtcc acggccatcg
      301 ccaggccgag gctcgcggcc agcagcaaca ggtcgcgctg gctcctcatg ctgtcggcga
      361 gcatgccgac ccggaccgcc gcgatcatgg caaacatgaa aatgagcgtc ccgccgagga
      421 cgaatggcgg gacgatggca atgagcgcgc cgaccttggg caccagcgcc atgaggatga
      481 gaatggcgcc ggcggcggcg acgacgaagc ggctccctac cccggtgagc gagatcgctc
      541 cgacgttctg atcgtaggag atgagcggca cgccgccgaa cagggcggcg acggcggagc
      601 cgagcccatc ggcggcaacg gcgccgcgca cgcgccgctc ggtcccctcg acgccgagca
      661 tccggcacag cgccagcgtg atgctcatgg tgtagaccgc cgccaccaga tgaaagacga
      721 gcacggtgat cagcccggat gtctgcggcc aggtgaagga gccgtagggc agcacggacg
      781 gcaggcggaa ccagggggcc ttggccacga cagcgaagtc ggcgagacca agcggtattg
      841 caacgagata gagcaccacc aaggcgatga agaccgacag cgcgcgccaa aaacccgtgg
      901 tcaggcgatt gacggcgagg atcaatacga cgctgccgat agcgaaggcg aacacgagcg
      961 gtttgccggc ataaggcgtg ttggtgccgc cggcgatgtt gaccgcaatg cggataaggg
     1021 tgatgccggt gacgacgagg agcgtggcga tgaccacggg cggaaacagc gcgcgcatct
     1081 tgccgatgac ggggctggca gcaaacagga tgaggccacc gagcatcatg gcggtgctcg
     1141 caccggcgag actcgaggcc ttggccatcg ccaccaccgc gacgatgtag acggaatggc
     1201 tgcccagcac gattggcagc cgcgcgccga caaagccgaa tccgagcgcc gacacggttg
     1261 tcccgatccc gcagccgagc atcacgccgg tcagcatgtt ggtgcgtagc tcgggcggca
     1321 gatcgagcaa ttggccgatc accagcggcg ccgcaatcat ccccgtgaac atgaccagca
     1381 cgtgctgcac gccgaacagc gcggtggcga cggcgcccgg cttgtcctcg agcgcgtagc
     1441 gcagcttgag gatggtcacg ccgctgcggt cgccttcggc ggccatcacg cttcccgcct
     1501 gttccgtcgg cgtaacggat gtcatcaact cccccgtttg ctcacagcgt caggtagctg
     1561 cgctgcactt ccgcgttttc ggcaagctcg gccatggtcc cgccccagcg gatctggcct
     1621 ttctccagca tgtaggcgcg gtcggaaacg atttcggcga agccgacatt ctgctccgag
     1681 agcaggatcg acaggccgcg ctttttcagc tccacgatag tgtcggcgat ctcctcgacg
     1741 atcaccgggg cgatgccttc ggacggttcg tcgagcagca cgaccagcgg attgcccatg
     1801 agcgtccgtg cgatcgtcag catctgctgc tcgccgccgc tcatgcggcc accgaggcgg
     1861 tggcgcatct cggcgaggtt gggaaagagc cggaacagga tctcgcacgt ccacgccggg
     1921 gctggcgtgc cgtcggcgaa ggcgcgcggc ggctgccgtc cggcgtcgag attttccatg
     1981 accgtgaggt cggaaaagat gcggcggtcc tccggcgtaa agcccaagcc gaggcgggcg
     2041 atctcgaacg gcctgagcgc cgaaatattg cggccgttga gcagcaccgt gccgcttcgc
     2101 cgcgccagga gccccatcac ggccttaatg gtcgtcgatt ttccggcgcc gttcctgccc
     2161 atcagcgcta ccacctcgcc gcgcccgacg gtgaacgcca cgtcgtagag cacttgcgcg
     2221 gcgccgtacc aggcgttgag ccgctctacc gccagtgcgg ggggcgccga tgcggacggg
     2281 gcgctcatga gccgacctct cgccgttcga acgtgcgccc gctgccgaaa tacacctgct
     2341 gcaccacggg gtcgccacgg accgccttgg cgtcgccgtc ggcgatcagc cggccgcgcg
     2401 ccatcaccac gatgcggtcg gcgaaggcga acaccacgtc catggagtgc tcagtgaaaa
     2461 gcaccgagac gccgcgctcg acgacaagag ccttcaccaa ggcgatcagg tcgttgcgct
     2521 cgcgcggcgc catgcccgcg gtcggctcgt ccatgagcag caggcgcgga tcgctcgcga
     2581 gcgcaatcgc aagctccacg cgtttcacgt cgccataggc gagctcgcgg ctcggccggt
     2641 cggcggcttc ctccatgccg acctggcgca ggagctcgag cgcgcgggcg cgatggtagg
     2701 acgccgctcg ccgccacagc ccgtaggttt cgcgggcgtg ggcgatcagc gccatctgca
     2761 cgttttcggc gacggtcatc gagctgaacg tggcggcgat ctggaaagtg cgggcgatgc
     2821 cgcggcggca gatctcgcgc ggcggcagcc cggcgatgtc gcggtcctcg aaacggatcg
     2881 ttccgcggtc cggcttgagc tggccgttga tgatgttgaa gcaggtcgat ttgccggcgc
     2941 cgttggggcc gatcagggcc agaaactcgc cgcgcgccac cgcgaagctc acgtcatcga
     3001 cggcgcgaac ggcgccgaag cttttgctca gcgaggcgac ggcgagctcg ctcatgaggt
     3061 gcgcaggcgt ccggcaagca gcgcaaaggc gccggcgaga cccgagggaa aggccagcac
     3121 caaaacgagg atgatgccgc cgaggagcgc gtgccagtat tcggtctgct gcatgacgaa
     3181 atcctgcagg acggcgaaca ccgacgcgcc gacgatcgga cccgacagcg tctgaatgcc
     3241 gccgaggagc accatgacca ggccgtcgat ggagcggccg atgctgatcg tttccggaga
     3301 gatcgagccc ttggcgaagg cgaagatgcc gccggccacg ccgcacaccg tgccggctac
     3361 ggcaaaggcg agccagtgca ctcgcttcac gtgaatgccg atcgcctccg cgcgcagcgg
     3421 cgaatcgcgg ccggcgcgca tcgcatagcc gaacggcgca aacaggatgc gccgcagcag
     3481 gagcacgccg gcaacgacga ggacgagcgt gagcaggaag aacagcgaga gccggtcgaa
     3541 cgggacgctc ggccagatgc cgagcacgcc gttcgagcct ccggtaagct cctgccactg
     3601 gaacacgatc gaccagacga tctgggcgaa ggcgagcgtc agcatcgcga ggtagacgcc
     3661 ggagagccgc acggcgaacc agccgaagag gagcgccccg agcgcggcgg cgaccggcgc
     3721 ggtcgccagc gccacgccca tcggcgccgc gaaccatttg acggcaagcg cggcgccgta
     3781 ggcgccgagc ccgaaatagg ccgcgtggcc gaaggagtgc atcccgcccg gccccatgat
     3841 gaaatgcagg ctggtcgcga acagcacagc gatgagcacg tcgacgccga ggacgagcgt
     3901 atagggcgaa gagcgcgcca acagcggcag cgccgccagc accacgaaaa cggccagccc
     3961 gaagagcgca aacgcgcgcg aggccgggcg gagcggcgcc tccggctcgg cgccgctgcg
     4021 cgcggcgagc tgcgggcgcc cgagcaggcc ctgcgggcgc gcgatcagca ccagggccat
     4081 gaccagaaac tcggcgacca gcgtcagctt ggaaaaattc accgagaacc cgccgagact
     4141 gacgagcccg atgccgatgc acaacgcctt gacctcggcg atgagtacgg cggcaacgta
     4201 ggaaccgacg atcgagccca tgccgccgat gacgacgacg acgaaggcgt cggtgatcac
     4261 cgtgaggtcg atgccgagat tggccggctc gcgcgcgacc tgcaaggcgc cgccgagccc
     4321 ggcgagcacg gagcccaagg caaagaccgc cgtgaacaac accgattgat taacgccaag
     4381 cgcgccgagc atttctcgat cctcggtcgc cgcgcgcacc agtcggccga aacgcgtgcg
     4441 cgcgaacacg gcgtgaagca agacgagcac gacgggcgcg atgatgatca ggaaagcgtc
     4501 gtagctcggc atgcggcggc cgagaatttc gatggcgccg cgcaggcccg gcgcgcgcgg
     4561 cccgagcaga tcttccggtc cccacagcca cagcgccgca tcgttgatga cgagaagcag
     4621 cgcaaaagtg gcgaggagct gaaacagctc cggggcgacg tagatgcggc gcaacagcac
     4681 gatctcgatc agcgcgccga gaacgccgac gataagcgct gcggcggcga tgccgcccca
     4741 gaagccgagc gcgccgttca tcgccgtcgc caaggtgacg gcgatatagg tgcccagcat
     4801 gtagagcgag ccgtgcgcga tattgatgat gcgggtgacg ccgaagatca gggaaagtcc
     4861 ggcggcgacg aagaacaggc cggacgccga ggccagaccg tcgacggcct gaaacgcaag
     4921 cccttcccag ttcattgccg gacgatatca gagcccggca gcagcgtcat cgttggcgcg
     4981 tgtgccctag ggccgtcggc gtagcttcag ccgtgcggcg gatgcgtcaa cagcggcggc
     5041 ggctgttgcg agttcgcgtc cgtgatcagc gtcccgccat ggccgtcggc gaccgcgacg
     5101 aa
//
LOCUS       DATMQB010000319         3240 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_750791, whole genome shotgun sequence.
ACCESSION   DATMQB010000319 DATMQB010000000
VERSION     DATMQB010000319.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3240)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3240)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3240
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_750791"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            108..308
                     /locus_tag="VNY79_09210"
     CDS             108..308
                     /locus_tag="VNY79_09210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72666.1"
                     /translation="MPNGPSLSLAEREQRIAIARDNIRQLIEQAAAQSGAEDEDRNAD
                     RIAQQQEELDRLVKQRDQLLKK"
     gene            323..1135
                     /locus_tag="VNY79_09215"
     CDS             323..1135
                     /locus_tag="VNY79_09215"
                     /inference="COORDINATES: protein motif:HMM:NF018684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysozyme inhibitor LprI family protein"
                     /protein_id="HWX72667.1"
                     /translation="MLRTAVPLALLLLLARSFAAPPAAAEPSFDCRTARTARELATCA
                     DARIAAADRELAAAWQNAIAGLDPATVKALRADQKQFLEDLDSGFEGEVWGKQSPPEG
                     RELRAQIARLRRGGDVDALADLEAQLRERIAFLRNLSPAASYAGLWKNHDSELWLAAD
                     GGEAHYRATFGTTTFGWAKYHCHFTAGFAAADEGLAAAAAHNTDPEVDEDTASTLRMT
                     RTGAMLVLTEEIPDNAGEGKLPRICPRGGDFADPLFHTGLKPGEAHRLKPED"
     gene            complement(1182..1718)
                     /locus_tag="VNY79_09220"
     CDS             complement(1182..1718)
                     /locus_tag="VNY79_09220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72668.1"
                     /translation="MLARAFAVVAALLAPTAAGAEDDAAATLRDLLAQYRCPVVDRFE
                     QIYNAAPHSHPQNLFLIVYFAARPHDYVQCVFDPLTYMFREAASGFYDNVASEPRTRH
                     SPATAIAALGRLGFSTDDSAGNFRIGFEVKEPPDLNTVADLILQALHDAFDARAGVTL
                     LIEAPLAPRPTGRCVPVS"
     gene            1804..2466
                     /locus_tag="VNY79_09225"
     CDS             1804..2466
                     /locus_tag="VNY79_09225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72669.1"
                     /translation="MSAPVEEGDGLSRLSGTELAHAYVTSVEAAEGTEHIGRQNRLAR
                     RRSNIVDALKARGEARQVLERLAQHSSEQVRANAKGALDWLDKPAQEFAPEPQREPQI
                     LWQCDHPPPAPLTRDEIAERLRRSVPASRDRLMNLALPAIGLWPQRRADIPAVASRFV
                     GTPPAPPDWEWPTFEDEPMLFVRSIARSCAACRRLNHCRRMGCSLSSAITTRSRAVIL
                     LA"
     gene            2394..2924
                     /locus_tag="VNY79_09230"
     CDS             2394..2924
                     /locus_tag="VNY79_09230"
                     /inference="COORDINATES: protein motif:HMM:NF020795.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1963 domain-containing protein"
                     /protein_id="HWX72670.1"
                     /translation="MPPHGVLAFFGDHDAVQGGDSLGMSAVYHWPDADRLVAAQPPIE
                     PILIFPACAVAPRPIFDLPHPFSTAVSKLQFGKEERDAYFDVWLEIREHGIPRECVRY
                     AGFSKLLGWPDLLQNDLWRFESQDDARLLLQVDSYCNGETLHGWGTGGNLYYLLPECD
                     LRARFYDNCDFEGQFT"
     gene            3049..>3240
                     /locus_tag="VNY79_09235"
     CDS             3049..>3240
                     /locus_tag="VNY79_09235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015684187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HWX72671.1"
                     /translation="MSGLLQDHVAAVTGAASGIGRAIALGFAREGAAVAVLDVNGDGA
                     AKTAADIAEAGGKAHAFTLD"
BASE COUNT          568 a         1077 c         1080 g          515 t
ORIGIN      
        1 gttcgctcgg ccgccccgca tgccggaaga ggtgctttac ggccggattt cccgtcgctc
       61 aatccaggtt agaattgccg cagcccgtcc aggagcggag aaaccaaatg cccaacggcc
      121 cgtcgctttc gctcgccgaa cgcgaacagc gcatcgccat cgcgcgcgac aacatccggc
      181 agctcatcga gcaggccgct gcgcagtccg gcgccgagga tgaggatcgc aatgcggacc
      241 ggatcgccca gcaacaggaa gaactcgacc ggctggtcaa gcagcgcgat cagctgctga
      301 agaaataacg gatcgcccgc ggatgctccg caccgccgtg ccgctggccc tgttgttgct
      361 gctcgcccgg tcgttcgcgg cgccgcctgc cgctgccgag ccgtcgttcg attgccgcac
      421 cgcgcgcacc gcccgcgaac tggcgacctg cgccgacgcc aggattgccg cggccgatcg
      481 ggagctggcg gcggcatggc aaaacgcgat cgcgggcctc gatccggcca cggtgaaggc
      541 gctgcgcgcc gatcagaagc aattcctcga agacctcgac agcggcttcg agggcgaggt
      601 ctggggcaag cagagcccgc cggagggaag agagctgcgc gcgcagatcg cgcgcctgcg
      661 ccgcggcggc gacgtcgatg cgctggctga tctcgaggcg cagttgcgcg agcgcatcgc
      721 cttcctgcgc aacctgagcc cggccgcctc gtatgccggg ctgtggaaga accacgattc
      781 cgagctttgg ctcgcggccg acggcggcga ggcgcactac cgcgcgacct tcggcacgac
      841 caccttcggc tgggccaagt accactgcca cttcaccgcc gggttcgcgg ccgccgacga
      901 gggcctcgcc gccgcggccg cgcacaacac cgacccggag gtggacgaag ataccgcgag
      961 tacgctgcgc atgacgcgca ccggcgccat gctcgtcttg accgaggaga tcccggacaa
     1021 tgcgggcgag gggaagctcc cgcgcatctg cccgcgcggc ggcgactttg ccgatccgct
     1081 gtttcacacc ggcctcaaac ccggcgaggc ccatcgcctc aagcccgaag attgacgcgt
     1141 gccgcggcgt agcaagagga ggccggcgag ggcgcggctc gctaactcac cggaacgcat
     1201 ctaccggtcg gtcgcggcgc cagcggcgct tcgatcagga gcgtcactcc cgcccgagcg
     1261 tcgaacgcgt cgtgcagcgc ttgcaggatg aggtcggcga cggtgttgag atccggcggc
     1321 tccttcactt cgaagccgat ccgaaaattt cccgccgagt cgtcggtcga aaatccgagg
     1381 cggccgagcg cggcgatggc ggtcgcgggc gaatggcggg tccgcggctc gcttgcgacg
     1441 ttgtcataga agccggaggc tgcctcacga aacatatacg tcaggggatc gaagacgcac
     1501 tgcacgtagt catggggacg cgcggcaaaa tagactatca gaaacaggtt ctgcggatgc
     1561 gaatggggag cggcgttgta gatctgctcg aagcgatcga ccacagggca gcgatattgc
     1621 gccagcaagt cgcgaagcgt ggccgcggcg tcgtcttcgg caccggccgc cgtcggcgcc
     1681 agcaacgccg ccacgaccgc gaatgcgcgc gccagcatct tttcatcccc tcccaccggc
     1741 cgcttgacaa attagaacat aacaggaaca agacaagcaa cggtaggttg catagggggt
     1801 actatgtcgg caccggtcga agaaggggac ggactatcaa ggctgagcgg gaccgaactt
     1861 gcgcacgcct acgtaacaag cgtcgaggcc gcagaaggca ccgagcatat cggaagacag
     1921 aaccggctcg cgcgccgtcg ctcgaacatc gtggacgcgc tcaaggcgcg cggggaggcg
     1981 cgccaggttc tcgagcggct cgcccagcat tccagcgagc aagtacgcgc caatgccaag
     2041 ggcgcgctcg attggctcga caagccggcg caggagttcg cgcccgaacc gcagcgggag
     2101 ccgcagattt tatggcaatg cgatcatccg ccgccggccc cgttgacccg cgatgagatt
     2161 gccgagcgct tgcgccgaag cgtgccggct tcacgcgacc gcctcatgaa tttggcgctg
     2221 ccggccatcg gtctgtggcc gcagcggcgt gccgatatcc ccgccgtggc gtcgcgtttc
     2281 gtcggaacgc cgccggcacc gccggattgg gagtggccga ccttcgagga cgagccgatg
     2341 ctgtttgtca gatcgattgc gcggagttgc gcggcctgcc ggcggctgaa ccattgccgc
     2401 cgcatggggt gctcgctttc ttcggcgatc acgacgcggt ccagggcggt gattctcttg
     2461 gcatgagcgc cgtttatcat tggccggatg ccgatcgcct tgttgccgcg cagccaccga
     2521 tcgagccgat tctgatcttt ccggcgtgcg ccgtggcgcc gcgcccgatt ttcgatctcc
     2581 cccatccctt cagcaccgcc gtcagcaagc tccagttcgg gaaggaggag cgggacgctt
     2641 acttcgatgt ttggctggag atccgggaac acggcattcc gcgcgaatgc gtccgctatg
     2701 ccggcttcag caagctcttg ggttggccgg atctgctgca gaacgacctc tggcgattcg
     2761 aatcccagga cgatgcgcgc ctcctcctgc aggtcgattc ctactgcaac ggcgaaacgc
     2821 tgcatgggtg gggtaccggc gggaacctct actacctgct gcccgaatgc gatttacgcg
     2881 cacgcttcta cgacaactgc gacttcgaag gtcagttcac gtgatttggc ccggcgcgca
     2941 gagcgggccg ggtattctcg tgaaggattt gccgcgcggc acgccttcgt cggcgcgcgc
     3001 gctgctgcta tgctcgctgc gcttcatgcg acagggggga caacataaat gtccggactt
     3061 ttacaggatc acgtcgcggc cgtaaccggc gccgcctctg ggatcggccg cgccatcgcg
     3121 ctcggctttg cccgcgaggg cgcggcggtc gccgtgctcg acgtcaatgg cgacggggct
     3181 gccaaaaccg cggcggacat tgccgaagcc ggcggcaagg cgcatgcctt cacgctcgac
//
LOCUS       DATMQB010000320         4823 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2297983, whole genome shotgun sequence.
ACCESSION   DATMQB010000320 DATMQB010000000
VERSION     DATMQB010000320.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4823)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4823)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4823
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2297983"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            250..2049
                     /gene="atzF"
                     /locus_tag="VNY79_09240"
     CDS             250..2049
                     /gene="atzF"
                     /locus_tag="VNY79_09240"
                     /EC_number="3.5.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004039 - allophanate hydrolase activity
                     [Evidence IEA];
                     GO_process: GO:0019627 - urea metabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="allophanate hydrolase"
                     /protein_id="HWX72672.1"
                     /translation="MTETVAEILSAYRGGAAKPEDVVARSFARIRAHADPAIFIALRE
                     EAEVLAEARELAGAADTSLPLYGIPVAVKDNIDVKGLPTTAACPAYAYRPNKDATAVA
                     RLRAAGALVLGKTNLDQFATGLVGVRTPYGIPRNLFDAKLIPGGSSSGSAVAVGAGLV
                     PLALGTDTAGSGRVPAAFSNVVGLKPSRGLVSAAGVVPACRTLDCVSILAFTVDDAMT
                     ALSAIAGADPGDAFSHPRQVHPVGPMPDGLRLGVPIAGQRLFFGDRASEAAYAAALTD
                     FAGLGAKIVEIDIEPFYAAARLLYEGPWVAERYLTARALVASSPQSLHPVTRQIILAG
                     AHGTAADAFAAFYQLAELRGVRDRTFSAIDALVLPTAPTIYTIEQVLADPIGLNSRLG
                     TYTNFVNLLDLCGLSVPASMRPDGIPFGVTLVAPAGEEAALAAIGREFHFAARLPLGA
                     LQHPQPPLARTAAPGPREIPIAVVGAHLSGMPLNGELRAAGGRLIERAATAPHYRLYA
                     LSGARPPKPGLLRVRNGAGGAIEVEVWALSDSAFGRFVAAVPPPLSIGTLELGDGRKV
                     KGFLVEAEGVAGARDISSFGGWRAFMAQEAASV"
     gene            complement(2073..2459)
                     /gene="hpxZ"
                     /locus_tag="VNY79_09245"
     CDS             complement(2073..2459)
                     /gene="hpxZ"
                     /locus_tag="VNY79_09245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxalurate catabolism protein HpxZ"
                     /protein_id="HWX72673.1"
                     /translation="MEIDLPEVIAEVTAAFERYEKALVSNDVAALNAMFHNDPRTIRY
                     GGTENLYGYAEIAAFRTARSPVGLGRTRSKTVISTYGRDCAVASTLFHRASVPGKIGR
                     QMQTWVRFPEGWRVVAAHVSFIDEPR"
     gene            complement(2510..3913)
                     /locus_tag="VNY79_09250"
     CDS             complement(2510..3913)
                     /locus_tag="VNY79_09250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AtzE family amidohydrolase"
                     /protein_id="HWX72674.1"
                     /translation="MHEAKAIDVAWSTAADIAAAVAAGRSTAASIVAAALARIRERGP
                     QFNAFTVVTEERALARARALDEARARRDALPPLAGVPFAVKNLFDIAGLTTLAGAKIN
                     RDAPPAKRDATIIRRLEAAGAVLVGALNMGEYAYDFTGENMHYGPSHNPHDLKRMTGG
                     SSGGSAAAVAGGLVPLALGSDTNGSIRVPASLSGLFGLKPTFGRLSRARTFPFVASLD
                     HTGPLARTTRDLTLAYDAMQGYDPDDPVCAERPAEPVVALLDRGVEDLRVAVAGGYFK
                     GRSAEVVSAVDRVAAALGANREIEIPEAERARAAAFVITASEGGSLHLPRLRTRARDF
                     DPAVRDRLIAGAMVPASLVMKAQKFRRWYRGEVLKLFAEVDAIVAPATPCTAPLIGQQ
                     TFMFGDTELPVRANLGIYTQPISFIGLPVAAVPVPLEPLAMGVQIIAAPWREDIVLRI
                     AHALEMKGVVAAPRPQI"
     gene            complement(3906..4073)
                     /locus_tag="VNY79_09255"
     CDS             complement(3906..4073)
                     /locus_tag="VNY79_09255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4089 domain-containing protein"
                     /protein_id="HWX72675.1"
                     /translation="MDALVTASAQALALPIDPAWRGGVRFNLQLLLMVAGRVDEFPLP
                     DDAEPAPVFHA"
     gene            4353..>4823
                     /locus_tag="VNY79_09260"
     CDS             4353..>4823
                     /locus_tag="VNY79_09260"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HWX72676.1"
                     /translation="MPNITFEAEPAPLSVELDRAALLIIDMQRDFLDPGGFGAALGND
                     VSRLQAAVGPSRQVLGAARRGDTREGHRPDLSDAPRHKVERGDSANRIGARGPMGRIL
                     VRGEPGHDIVPELYPLKDEPVIDKPGKGAFYQTDLELMLRNRGIDTLFVCGVTTE"
BASE COUNT          720 a         1691 c         1623 g          789 t
ORIGIN      
        1 gcggaggatg aggcgagcat ttgcgaaaca catcatgccg gtcttggaac ggtggtgggt
       61 ttcgcctcgc tcaccgatct gccctcccga aggattgcag acgcggatgc ggcggccgat
      121 ggctcctgag ttgcttctct acacttcaag aaccaccggc gccccagccc cattgcgaag
      181 tcaccgggat tggcacaaaa ggagcccggc gaacgcggtt gccgggcccg cgccaacacg
      241 gagcctttcg tgaccgaaac ggtcgccgag attctgagcg cctatcgcgg cggcgctgca
      301 aagcctgagg acgtcgtcgc gcgcagcttt gcgcgcatcc gtgcccacgc cgatccggcg
      361 atcttcatcg cgctgcggga agaagccgag gttctcgccg aggcgcgcga actcgctggc
      421 gccgccgaca cgtcgcttcc gctctacggc atccccgttg cggtcaagga caatatcgac
      481 gtcaaaggcc tgcccacgac cgccgcgtgc cccgcctacg cttaccgccc aaacaaggat
      541 gccaccgccg tcgcgcggct gcgcgcggcg ggcgcgctcg ttctcggcaa gaccaatctc
      601 gaccagtttg cgaccggcct cgtcggcgtg cgcacgccct acggcattcc gcgcaacttg
      661 ttcgacgcga agctcattcc cggcgggtca agctcgggct cggcggtcgc cgtcggggcc
      721 gggctggttc cgctcgcgct cggcaccgat acggcgggat cgggccgcgt ccccgccgcc
      781 ttcagcaacg tcgtcggcct caagccgagc cgcggcctcg tctccgccgc aggcgtcgtg
      841 cccgcctgcc gcacgctcga ttgcgtgtcg atcctcgcct ttactgtcga cgacgcaatg
      901 accgcgctga gcgcgatcgc cggcgctgat cctggcgatg cgttttcgca tccgcggcag
      961 gtgcacccgg tcggacccat gccggacgga ttgcggcttg gcgtgccgat tgccggccag
     1021 cgtctgttct tcggcgaccg cgcctcggag gcggcctacg cggcggcgct cacagatttc
     1081 gccggtctcg gcgcgaagat cgtagagatc gacattgagc cgttctacgc ggcggcacgt
     1141 cttctttacg aggggccgtg ggtcgccgag cgctatctca cggcgcgcgc gctcgtggcc
     1201 tcgtcgcccc aatccctgca tccggtgacg cggcagatca ttctcgccgg cgcgcatggc
     1261 accgcggccg acgcgttcgc ggccttctat cagctcgcgg agctgcgggg cgtgcgcgac
     1321 cgcaccttca gcgcgatcga cgcgctggtg ctgccgacgg ctccgaccat ctacacgatc
     1381 gaacaggtgc tcgccgaccc gatcgggctc aacagccggc tcggcaccta caccaatttc
     1441 gtcaacctcc tggatctctg cggcctttcc gtaccggcct cgatgcgccc tgacggcatc
     1501 ccgttcggcg tgacgctggt ggcacccgcc ggcgaggagg ccgcactggc ggcgatcggc
     1561 cgtgaattcc acttcgccgc ccgcctgccg ctcggcgcgc tccagcaccc gcagccgccg
     1621 cttgcgcgga cggcggcgcc cgggccccgg gaaatcccca tcgccgtcgt cggcgcgcat
     1681 ctctccggca tgccgctcaa cggcgaattg cgtgcggccg gaggccgcct gatcgagcgt
     1741 gcagcaacgg cgccgcacta ccgcctctac gcgctttccg gtgctcgccc accgaaaccg
     1801 ggcctcctgc gcgtgaggaa tggcgccggc ggcgcgatcg aggtcgaagt ctgggcgctg
     1861 tcagacagcg cgttcggccg cttcgtcgcc gcggtgccgc cgccgttgtc gatcggcacg
     1921 ctcgaactcg gcgacggccg caaggtcaaa ggctttctgg tcgaagccga gggggtcgcc
     1981 ggagcgcgcg acatttcgag cttcggcggc tggcgcgcct tcatggcgca ggaggcagca
     2041 tcggtttgat gggattgcgg gtggcgaaat tgtcagcgcg gctcgtcgat aaaactcacg
     2101 tgggcagcga cgacccgcca gccttcggga aagcggaccc aggtctgcat ctggcgcccg
     2161 atcttgccgg gcacgctggc gcggtgaaac agcgtcgagg cgaccgcgca gtcgcggccg
     2221 taggtgctga tgacggtctt cgaccgcgtg cggccgaggc cgaccggcga acgcgcggtg
     2281 cgaaacgccg cgatctccgc atagccgtag agattctccg tcccgccgta gcggatcgtg
     2341 cgcgggtcgt tgtggaacat cgcgttgagg gcagcgacgt cgttcgatac cagtgctttc
     2401 tcgtaacgct cgaaggcggc ggtcacctcg gcaatgacct ccggcaggtc gatctccatg
     2461 ttcttcctcc aggcaagcat tccaccccgg tgaaggcttg ggggtacgcc tatatctgcg
     2521 ggcgcggcgc tgcgaccacg cccttcatct ccagcgcatg ggcgatgcgc agcacgatgt
     2581 cctcgcgcca gggcgcggca atgatctgca cgcccattgc cagcggctcg agcggcaccg
     2641 gcacggcggc gacgggaagg ccgatgaagg atatcggctg ggtgtagatg cccagattgg
     2701 cccgcaccgg cagttcggta tcgccgaaca tgaacgtctg ctggccgatc agcggcgcgg
     2761 tgcacggcgt cgccggtgcc acgatcgcgt cgacctcggc gaacagcttg agtacctcgc
     2821 cgcggtacca gcggcggaat ttctgtgcct tcatcaccag cgaggccggc accatggcgc
     2881 cggcgatcag gcggtcgcgc accgcgggat cgaagtcgcg cgcgcgcgtc cgcagccgcg
     2941 gaagatgcaa gcttccccct tcgctcgcgg tgatgacgaa agcagcggcg cgtgctcgct
     3001 ccgcctccgg aatctcgatc tcgcgattgg cgccgagcgc cgccgcaacg cggtcgacgg
     3061 cgctgaccac ctcggcgctg cggcctttga aatacccgcc ggcaactgcg acgcgcaggt
     3121 cctcgacgcc ccggtccaga agcgcgacca ccggctccgc cggccgctcg gcgcacaccg
     3181 gatcgtcggg gtcgtagccc tgcatggcat cataagcgag cgtcaggtca cgcgtcgtcc
     3241 gcgccagcgg tcccgtatga tcgaggctcg caacgaacgg aaaagttctc gcgcggctta
     3301 accgtccgaa ggtgggcttg agtccaaaca agccgctcag cgaggcgggc acgcggatcg
     3361 atccgttggt gtcggagccg agcgcgagcg gcacgagccc gcccgcgacc gcggcggccg
     3421 aaccgccgga cgagccgccg gtcatgcgct tgagatcgtg cggattgtgc gacggcccgt
     3481 agtgcatgtt ctcgccggtg aaatcgtagg cgtactcgcc catgttgagc gcgccgacga
     3541 gcacggcgcc ggccgcttcg agccgcctga tgatcgtcgc atcgcgtttc gcgggcggcg
     3601 catcgcgatt gatcttggcg ccggcgagcg tcgtcaggcc ggcgatatcg aacaggtttt
     3661 tcacggcgaa cggcacgccg gcgaggggag ggagcgcgtc acgccgcgcc cgcgcttcgt
     3721 cgagcgcccg tgcgcgcgcc agggcgcgct cctcggtcac cacggtgaag gcgttgaact
     3781 gcgggccgcg ctcacggatg cgggcgagcg ctgccgcgac gatgctcgcc gcggtgcttc
     3841 gtccggcggc gacggcggcg gcgatatcgg ctgccgtgct ccacgcgaca tcgatggcct
     3901 tcgcctcatg catggaacac cggggcgggc tcggcgtcgt cgggcaatgg aaactcgtcc
     3961 acccgccctg ccaccatcaa tagcaattgg aggttgaacc ggacgccgcc gcgccaagcc
     4021 gggtcgatcg gcaatgcaag cgcctgcgca ctggccgtga ccagggcgtc gattgcgtcg
     4081 ggcttgcccc gcttcgctga gcttgccgag cgcgccggcg gcctcgcctt gcgcgcggta
     4141 ttcgatcttc gcttcatgcc gtgaacgtct cccaaccgcg cctaagccct tgatgttgtg
     4201 tgattgttgc acgcgcttgg acgagtgcca agaccccccg gacaagacca gcgacaagca
     4261 ccgcggatgc gcgtgccgct cgcgacgcag gcttcactgc tatgctggcc ctgtttttgc
     4321 aggccgtttc cggttgggct tggggggaag caatgccgaa catcactttc gaagcggaac
     4381 cggccccgct ttcggtcgaa ctcgaccgcg ccgccttgct gatcatcgac atgcagcgcg
     4441 actttctcga ccccggcggc ttcggcgccg cgctcggcaa tgacgtgtcg cgcctgcagg
     4501 ccgccgtcgg tccctctcgg caggtactcg gcgccgcgcg ccgcggcgac acgcgcgaag
     4561 ggcatcggcc cgatctctcc gatgcgccgc ggcacaaggt cgagcgtggc gactcggcga
     4621 accgcatcgg tgcgcgcggg ccgatgggcc ggattctggt gcgcggcgag cctggtcacg
     4681 acatcgtccc cgaactctat ccgctcaagg acgagccggt gatcgacaag ccgggcaagg
     4741 gtgcgttcta tcagaccgac ctcgagctga tgctgcgcaa ccgcggcatc gatacgctgt
     4801 tcgtctgcgg cgtcaccacg gaa
//
LOCUS       DATMQB010000321         3740 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4464372, whole genome shotgun sequence.
ACCESSION   DATMQB010000321 DATMQB010000000
VERSION     DATMQB010000321.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3740)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3740)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3740
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4464372"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..218)
                     /locus_tag="VNY79_09265"
     CDS             complement(<1..218)
                     /locus_tag="VNY79_09265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003529528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein H"
                     /protein_id="HWX72677.1"
                     /translation="MLKFTPDHEWLRIDGDVAVVGITPHAQEQLGDLVFVELPPSGKS
                     FAKGAPAAVVESVKAASEVYAPITGEIV"
     gene            complement(233..1393)
                     /gene="gcvT"
                     /locus_tag="VNY79_09270"
     CDS             complement(233..1393)
                     /gene="gcvT"
                     /locus_tag="VNY79_09270"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004047 - aminomethyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006546 - glycine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HWX72678.1"
                     /translation="MTAVTVPTQPALKRTPLYDLHVAMGARMAPFAGYEMPIQYPAGV
                     MKEHLRTRAAASLFDVSHMGQIALRPNGGMVADVAQALERLVPVDVLGLAPGRQRYAY
                     FTNAHGGIIDDLMITARGDHVVLVVNASRKEVDEAHLRAATSPVCTMEVLDDRALLAL
                     QGPKAEEALARLAPGVASMRFMDARMLAIAGSACLVTRSGYTGEDGFEISVAGSEADR
                     LARLLLDDASVALAGLGARDSLRIEAGLCLYGADIDEQTTPVEAALEWAMQKVRRPGG
                     ARAGGFPGADAISRELDVGPRRRRVGLRSLDRTPVRGGALLFAGRSAAEPIGTVTSGC
                     FGPSAAGPVAMGYVPHLQSAPGTTLFAEVRGNRVPVEVTDLPFVPHRYKRTN"
     regulatory      complement(1591..1679)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            2089..2340
                     /locus_tag="VNY79_09275"
     CDS             2089..2340
                     /locus_tag="VNY79_09275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72679.1"
                     /translation="MTSLRIAALAFAALSAAMASGTVSAMPADGLAPAAKQVAGDVQD
                     VRWMCGPYRCWWTPGPYWGGPYWGPRPYWHHWGWHHHWW"
     gene            2909..>3740
                     /locus_tag="VNY79_09280"
     CDS             2909..>3740
                     /locus_tag="VNY79_09280"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: protein motif:HMM:NF012371.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HWX72680.1"
                     /translation="MALAADDRGIFYKAAFGMRAVDKPEPMTADSVFRIASMTKAVTG
                     AAAMQLVEQGRIGLDQPMGDVLPVVRDVKVLDGFDADGAPQLRDAKAPVTLRHLLTHT
                     SGYGYDIFHTDLGRYIQIAGLPSIVTCKNDALRIPLLFDPGANWEYGIGIDLAGKVVE
                     AVSGETLESYFQRHIFQPLGMHDTSFVLRDDMARRLVGTHARGADGKPAPITFEFPQD
                     ADFHMGGGGLFSTAPDYLTFTRMLLAGGTLDGVQVLKPETVKLMGRNAIGDIEVPKLR
                     S"
BASE COUNT          657 a         1262 c         1218 g          603 t
ORIGIN      
        1 tcgacgatct cgcccgtgat cggcgcgtac acctcggagg ccgccttgac cgactccacc
       61 actgcggccg gcgcgccctt ggcgaagctt ttgcccgatg gcggcagctc gacaaagacc
      121 agatcgccga gctgctcctg agcatgtggc gtgatgccga cgaccgcgac gtcgccgtcg
      181 attcgcagcc actcgtggtc cggcgtgaac ttcagcatga cggaatcgct cctcagttgg
      241 tgcgcttgta gcggtgcgga acgaacggca ggtccgtcac ctcgaccggc acgcggttgc
      301 cgcgtacctc ggcaaacaac gtcgtcccgg gcgccgactg caggtgcggc acatacccca
      361 tggcgaccgg accggccgcc gatggtccga agcagccgga cgtgaccgtg ccaatgggct
      421 cggccgcgga acgcccggca aacaacaagg cgccgccgcg aaccggcgtt cgatcgagcg
      481 accgcaagcc gacccgacgc cgccgcggac cgacatcgag ctcgcgggat atcgcgtccg
      541 cgccggggaa cccgccggcg cgcgcgccgc cgggccggcg gactttctgc atcgcccatt
      601 ccagcgccgc ttcgaccggc gtcgtctgct cgtcgatatc cgccccgtaa aggcacaggc
      661 cggcctcgat ccgcaagctg tcccgagcgc cgagaccggc aagtgcaacg gacgcatcgt
      721 ccagaagcag gcgcgcgagc cggtccgctt ccgaaccggc gacgctgatc tcgaagccgt
      781 cctcgccggt gtagcccgac cgggtcacga ggcaggcgct gccggcgatc gcgagcatgc
      841 gcgcgtccat gaagcgcatg gacgcgaccc ccggcgcgag gcgggcgagc gcttcctcgg
      901 ctttcggccc ttgcagggcc agcaaggcgc gatcatcgag cacctccatc gtgcagaccg
      961 gcgacgtggc ggcacgcaag tgcgcctcgt cgacctcctt tctgctggca ttgacgacga
     1021 gaacgacatg gtcgccgcgg gccgtgatca tgagatcgtc gatgatgccg ccgtgcgcgt
     1081 tggtgaaata cgcgtagcgt tgtcggcctg gcgcgaggcc aagcacatcg accgggacca
     1141 gacgctcgag cgcctgcgcg acatccgcca ccatgccgcc gttcggccgc agcgcgatct
     1201 ggcccatatg cgagacgtcg aaaaggctcg cggcagcgcg cgtgcggaga tgctccttca
     1261 tcacgcccgc cggatactgg atgggcattt cgtagccggc gaaaggggcc atgcgtgcgc
     1321 ccatcgcgac gtgcagatcg tagagcgggg tgcgcttcag cgccggctgc gtgggaacag
     1381 tcaccgccgt cattgggccg cccccgccat gacgacgaac gcgccggcaa gggcgcacga
     1441 cggccggacg ctccgcggtg aatggtcggg actggtcggc agcatcggga cacctcatca
     1501 gcttctgctg atcgtcaggt gccccctctg tatctttgcc tgagaacgtt atcccgtcgg
     1561 cggacgcgta gcgtctcttt ccagagtcta ggcgattgcg cggttcatct gcctgagagt
     1621 ttccggggcg gttgctcctt cggcgccggc tcgcggccgg tctctcccgc agcaatacga
     1681 gctaaagtgc agaactcctc aatatcgata cacaataggt ataggacttc ggctgaattg
     1741 tcacccccgt ttgccatccc gtgtggatcc ccgaagcgag cgtcatccgc aagttgcgcg
     1801 cgacgccgcg cgcattgaac ttgagtgcgc ttcggcgacc acctgtcgca gaacgtcgcg
     1861 ccggcagcag gtgcaacttg ccacggaaca ttaaaaaacg gtcatccagg agatgaagac
     1921 aatacagcgc cgctcctcat tcaaggcgtt gcgccttgac gcgcgccgcg ccgctgtgtg
     1981 gtcgggctga actgcaactg aacgacacct tcagcgtccg taaattccgt gtgtgagagt
     2041 ttttggtccg ggtggcgatt tacaggactc cagaaaggag gagttgtcat gaccagcctg
     2101 agaattgctg ctttggcttt cgcggccttg agcgcggcga tggcgagcgg cacggtgtcg
     2161 gcgatgccgg cggatgggct cgcgccggcg gccaagcagg ttgccggcga cgtgcaagac
     2221 gttcggtgga tgtgcggtcc ttaccgctgt tggtggacac ccggccccta ttggggtggc
     2281 ccgtactggg gcccccgccc ctattggcat cactggggtt ggcatcacca ctggtggtga
     2341 attcttggca gaaggaagcg cggccccgac cggcgacccc gggggtggtc gcgtcggaga
     2401 gtccatgacc ccaaccggtc gcgctcctga tcgggcatca cgccattgtc catcggccgc
     2461 gccgatgagc ggagccttcc gtgcgccgcg ccgacgtcgc gccaacctgc gtgcccccag
     2521 cttgccttct tcaaggttca cgatactaag ggacacaatc gttcaagcgc cccagcagaa
     2581 ccaggcgaga gtcatggctc aacgcaagaa gaccctacgg agaaaaacgt caacggcgcg
     2641 gggtaaggcg cgcaaagcgg ccaagccccc gcgcgggaaa gcggggaagc gcgccgcggc
     2701 caagccgacc cctcgaaagc gtcgcaccaa ggctccacgc aaaacgacaa ccgtaaagaa
     2761 ggtcgcgcga aaaactgcga agccgaggag gacgccgcgc actcccgcgg ctcagggcgt
     2821 cccggctccg gcggcgcaat cgcgcacgcc gctcgatctc gaccgggccc tcagcaaacc
     2881 gatcgaagcc ggtctcattc cgggcatcgt ggcgcttgcg gccgacgatc gcggcatctt
     2941 ctacaaggcc gccttcggca tgcgggcggt cgacaagccc gagccgatga cggccgattc
     3001 ggtgtttcgc atcgcctcga tgaccaaggc cgtcaccggc gccgccgcca tgcagctcgt
     3061 cgagcagggg cgcatcggtc tcgaccagcc gatgggcgac gtgctcccgg ttgtccgcga
     3121 cgtaaaggtg ctcgacggct tcgatgccga cggcgcgccg caactgcgcg atgccaaggc
     3181 gccggttacg ctccgccacc tgctcacgca tacgtctggc tacggttacg acatcttcca
     3241 tacggacctg ggccgctaca tccagattgc cggactgccc agcatcgtca cctgcaagaa
     3301 tgacgcgctg cggataccgc tgttgttcga tccgggcgcg aactgggagt acggcatcgg
     3361 catcgatctt gccggcaagg tcgtcgaggc ggtgagcggg gagaccctgg agtcctattt
     3421 ccagcggcac attttccagc cgctcggcat gcacgacacg agtttcgtgt tgcgcgacga
     3481 catggcgcgc cgcctggtcg gcacccatgc gcgcggtgcg gacggcaaac cagcgccgat
     3541 cacctttgaa tttccgcagg atgccgactt ccacatgggt ggcggcggcc tgttctccac
     3601 cgctccggac tacctcacct tcacgcgcat gctgctcgcg ggcggcacgc tcgacggcgt
     3661 gcaggtgctc aagccggaga cggtgaagct catggggcgc aacgccatcg gcgatatcga
     3721 ggtgccgaag ctgcgcagca
//
LOCUS       DATMQB010000322        17649 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2299489, whole genome shotgun sequence.
ACCESSION   DATMQB010000322 DATMQB010000000
VERSION     DATMQB010000322.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 17649)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17649)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17649
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2299489"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..304
                     /locus_tag="VNY79_09285"
     CDS             <1..304
                     /locus_tag="VNY79_09285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX72681.1"
                     /translation="NPRAPAYSSMKAGVIALTKSLGKELATYNISVNCVTPAVAKTAM
                     GMSQDPDFLAMVVSKIPRGRMLELEEAASMISSLATAENSFTTGAAFDLSGGRATY"
     gene            372..1007
                     /locus_tag="VNY79_09290"
     CDS             372..1007
                     /locus_tag="VNY79_09290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HWX72682.1"
                     /translation="MRLYYAPGACSLAPHIVLEEVGARYELSRVDLAANQQNSAEYLR
                     INPKARVPALIDGDWVLTEAPAILRYIAARHPAAGLWPWDPREEARCAEWLNWISSTI
                     HVAFVHVRRAARYAADPHAVEDVATTARKTCRDLWGAVEDKLGDAPWAIGERYSVADP
                     YLLVYWTWGRGPVLAFDMAHDFPRWTEHARRLAGRPAVQRAFASEGLALPA"
     gene            complement(1128..2696)
                     /locus_tag="VNY79_09295"
     CDS             complement(1128..2696)
                     /locus_tag="VNY79_09295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HWX72683.1"
                     /translation="MSHTALRREFSDLIDLDAPVDRVASGFTFTEGPIWHPRDQYLLF
                     SDMPADVRRRYDERGGVREVMQPSNKCNGMTYDANLALIVCEHATSSLIRERDGRRET
                     IASHFDGKELNSPNDVCMRSDGSIYFSDPWYGRMPVYGVERPRQLGFQGVYRVPPGGG
                     EPQLLVDRNLFDQPNGLCFSPDERQLYVNDTVRCLIRVFDVNADGSLGGDRIFASGIR
                     SELEPGVPDGMKCDSAGNIWVTAPGGVWVYNRSGALVGKVRVLEPVANLHWGKSDWRT
                     LFMCATHSLYAVRTKVGPRVEPFMRASASAGAAAAAAPERASAHGGLNLDPSRCALII
                     QDMQNDVVMDGGAFAASGSPQHAREQNVIENIRRLAEACRSRGVMIIHVWFVVEPGAP
                     GVTLNAPLFEGLVDSKAMVRGTWGSAPVPGLEPQPGDHVVEKVRMSAFEGSKLEITLR
                     AGGRDTIIDTGAWTNMSIEHTARTGADKGYFVIVPEDCCSTMNADWHRASIQYAMQNV
                     AAVTKSSEVIAALR"
     gene            complement(2711..3559)
                     /locus_tag="VNY79_09300"
     CDS             complement(2711..3559)
                     /locus_tag="VNY79_09300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acyl homoserine lactonase family protein"
                     /protein_id="HWX72684.1"
                     /translation="MALEIKILDYGDIELESSFLVLGRDCGRTRRVPTLGFLVLGGTW
                     PVVIDTGYRSNQIMETLGMRGMQSHENMIENQLKKHGLRLGDVRYVLHTHLHIDHAGK
                     DDLFPMNTAVVLNRRELEYSVSGLMHPQYPAVDIKHLIDRLHTKGALRFLDLEISGPT
                     ELMPGLICEAAGGHTEGSMNVIVKTAEGVATICGDVLYDINDQLVEPFREISDMEPRV
                     TGNHGTTKRQEKAAIKKVVASSRFVLPVHDRPALIEAGQVVGRLQDAVPGPVVQSLPR
                     RNWFPA"
     gene            complement(3596..4483)
                     /locus_tag="VNY79_09305"
     CDS             complement(3596..4483)
                     /locus_tag="VNY79_09305"
                     /inference="COORDINATES: protein motif:HMM:NF016777.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HWX72685.1"
                     /translation="MSAVIDAHHHIWRRADLPWLEGPMQPRIFGPYEPIRRDYPISEY
                     LADIAGCDIVRSVYVQANWAKEAFADEVAYVQRAADETGYPQAIVGYADFLAADVRPQ
                     LDRLSKYPGMRGLRMQLHWHENPQHRFAAKPDLARDPTLQKNVAQLADYGWSFDLQVF
                     AGQMASAGELADSCPKVTFVLQHAGMLEDLSPAGWAQWSSGMRELAVRPNVVCKLSGL
                     GTFIHRNDPDHIAAMVKETVGMFGPARCLFGSNFPIEKLWTRYSDLVAAYRRALEPFG
                     EATARAALHDTAARVYRLN"
     gene            complement(4480..5592)
                     /locus_tag="VNY79_09310"
     CDS             complement(4480..5592)
                     /locus_tag="VNY79_09310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008972775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VWA domain-containing protein"
                     /protein_id="HWX72686.1"
                     /translation="MSDVVRTIAPFLAFAALLRRSGFAVAPEQIMAWLAAIEILGPNG
                     IGDIRRSAHATLAPPPDRFAEFDALFNAHFLGALVPGLEAEPSDEEPPRAADDSAGGP
                     EPIFGEDTHESGAKATGAERLAARRFAPGSEDETLRRFARDLPARVPRRRGYRWRAAR
                     GGPRADVRRMFREAMRNAGEFIHMRRRRRRLRQRRIVLLIDVSGSMKERTEAHLAFAH
                     ALVRAADSVEVFTIGTRLTRITRALRLKNRAQALTAASLLVPDWDGGTRIGEALGAFL
                     AVPRFASLARGAAVVVLSDGLERGDPSAMRNAVDHLSRLAWRTVWLTPLAADAGFEAR
                     TAGLVAARPFLDELGNGGSIDSICAHVLGLAKVRAA"
     gene            complement(5589..6476)
                     /locus_tag="VNY79_09315"
     CDS             complement(5589..6476)
                     /locus_tag="VNY79_09315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HWX72687.1"
                     /translation="MAVRRTIVGIGSPRELEDALRAAYYLADEELATAAYLALALGKP
                     LLLEGAPGVGKTEAAKAIAGVLGRALLRLQCYEGIDAAAALYEWNFPRQMLALRQEAA
                     AGGHIDIYKDEFLIERPMLACLRRPEETVLLIDEIDRSDQEFEAFLLEFLSDFQISIP
                     ERGAIRAYERPVVILTSNRTRELHEALRRRCVYHWIEYPSPEREMRIVMMRASGVGER
                     AARAVVAAVGRLRREPLAKRPGIAETVEWAEAATLLNEQGARWPDAFRRSLGVALKDE
                     DDFVHVAPKIDAILAEAQA"
     gene            complement(6483..7508)
                     /locus_tag="VNY79_09320"
     CDS             complement(6483..7508)
                     /locus_tag="VNY79_09320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HWX72688.1"
                     /translation="MAKHRGRGVATINYPIGMNLGGDPSQALVHSNPSGKFTVALSSI
                     DLGQGMKSVTRQICAETLGVPVEDVYVDTADSDTGPHCMGSFASRGTHRVGNAVMVAA
                     REARAVMMEAAAEELEVDPGDLETDGKGSIRVKGAPHRSISVRDVAIAAQFRQGRTIS
                     GRGIFLVPLSDVDPETGEMSPATCYAHACLIAEVEVDDETGDVTVLKMTSAYEVGRAL
                     NPKLVEQQLVGGSWMGMSHALYETPEPYYPDTREGPRDFNEYLMPGPGDICPHDILVL
                     ERPAPDGPFGAKGPGEMCANPVLPAVANAVFNAVGVRINDLPITPEKILRALKARGGA
                     APAARPR"
     gene            complement(7511..9121)
                     /locus_tag="VNY79_09325"
     CDS             complement(7511..9121)
                     /locus_tag="VNY79_09325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HWX72689.1"
                     /translation="MLELRKDIFADERDDNLKEIGQPTQRQDILGHVTGTSPYYDDHR
                     FANLLHLKLLRSPHAHARIRSIDDAAAARAPGVKRIIRGADVPVNLNTLLSLIQFGKD
                     DEPSLATDVVRYKGEPILAIVATSERAAQEALAMVRVSYDPLPAVFDVEEALKPGAVS
                     VNAAYPKNTFEYYGKYDHQKLRFGDVDAGFAQAEIVLEDRYQMSPIEHAPTETNGSIA
                     VPDTNGRFIVYTSTQALFFSLDTSAKINAMQSNQLHFIGGTVGGGFGGKVDTLTEPLA
                     ILAARLTGAPVRHRLSRHEEMQFGSPRGGERIYIKDGVMRDGRIVARKVTAYFDSGAY
                     TRLSSYAAVKCAAHIPGPYTIPNVSADVYCVFTNRTPATAMRGFGVTALDFALECQMD
                     KLAIAIGVDPLEFRILNAYRDGDMKAHRREAKNCALIECAQVAAEKAHWPLRDEFRRM
                     SSRQGGDAARTVGGADRTRAPAPAAPAATARPSTPQRVSYERPAAAAPVAPPAPPPRS
                     VPPPPAASPAGSTHGAPRFSSVFGTRRR"
     gene            complement(9133..9612)
                     /locus_tag="VNY79_09330"
     CDS             complement(9133..9612)
                     /locus_tag="VNY79_09330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HWX72690.1"
                     /translation="MKTPIQFRLNGEDVAAFVDSGANLLDVLRESVGDLSVKGGCWQG
                     TCGTCTVLIDGAPRVSCVTLAESCAGRSVETVAGLRRGADLHPLQTAFMERFAAQCGY
                     CTPGMLMAAKALLDRNPAPTREDVVDAICGNICRCTGYEPIIQAVLDAARGDNRRRA"
     gene            complement(9620..10438)
                     /locus_tag="VNY79_09335"
     CDS             complement(9620..10438)
                     /locus_tag="VNY79_09335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008140522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HWX72691.1"
                     /translation="MSVTVKTFARLADAAGALSSERGARFLAGGTLVMRAVNEADPAI
                     ETIVRSTDPTFSHISASSGRVELGAGVTMAAILAERELAFLHPVARAVGGPAVREAAT
                     VGGNLFAPSPYGDFAAALLALDATVVFAGGFGQREVPLEEFLRSRDRGATLVASVAFK
                     RPVAQTFRFAKVTRVHPKGISVLSIAAQLPLASGRVNGARIAYNAMDKTPVRAKAAER
                     ALEGRTLDAAGLAPALAVATDGTSPVDDAIASAWWRREILPVHLRRLLLGASQT"
     gene            complement(10435..10896)
                     /locus_tag="VNY79_09340"
     CDS             complement(10435..10896)
                     /locus_tag="VNY79_09340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015666020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HWX72692.1"
                     /translation="MIRIVRSTVIDAPTDRVWALLRDFNGHDRWHPAVAKSAIERGQS
                     ADKLGCVRRFFLRDGSELRERLLTLSDLEQTFSYCLMDTPVPLFNYVAHVRLAPVTDG
                     DRTFWEWRCSFSTRKGEEEEMTRMVGEDIYEAGFAAIRSRLAASAGLEGRA"
     gene            complement(10901..11338)
                     /locus_tag="VNY79_09345"
     CDS             complement(10901..11338)
                     /locus_tag="VNY79_09345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HWX72693.1"
                     /translation="MARVYVSSVINGRSDRVWARVRDFNGLPSWHPGIAESRIENGEP
                     SDKVGCVRDFRLRNGDRIREKLLGLSDFDLFCTYSILESPMGVENYVATLRLTPITDG
                     DRTFVEWTAEFDCALEREAELVSNIGSGVFQGGFDALKRQFGG"
     gene            complement(11344..14667)
                     /locus_tag="VNY79_09350"
     CDS             complement(11344..14667)
                     /locus_tag="VNY79_09350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin domain-containing protein"
                     /protein_id="HWX72694.1"
                     /translation="MSVAILGSLIIWLILAVIVIAIVVYFVNWLYRRSSKELSFVRTG
                     LFGEKVVINSGAFVLPFIHEVTPVNMNVLRMQVVRNRDDALITKDRMRVDIESEFYVR
                     VPPTPEAVTIAAATLGRRTTNVADLDALLSGKFVSALRSVASEMTMVEMHERRGEYVT
                     RVKESALEGLAQNGLEVESVAITDLDQTDLEFFNPSNRFDAEGLTKLIEDIESRRKLR
                     NDIEQDSMILIRTRNLEAEKQALDIDRESETARLNQERDIEVRRAVQRAELARERSLR
                     DTEAEQAQIAAREEVEKTRIAHERALAEARIISEREIREREIERTRQLDEAEIAARER
                     VERARIAQERVITEARIAREEEDQRREIEKTRAVEQAEITAREETEKARIAQELAVTA
                     ARIAKDEENRRLEIERMRNVEQAEIAARETTERARIAQERVVTDERIALEEEIRRREI
                     ARNRAIDEEEIAAGKATEEARIAREKALAADRIASELATRTLEIERTRSLEESDIAAR
                     EVMAAARIKHEERVRALDIARGRSTEEAEIAAREAVEGARIAQEKKIAVDRIVSEEET
                     RSREIERIKAIDAAEIAARESTEIARIALDRKIAADRIDADRETRGLEIARNEAIESA
                     EIASRQIVETVRILEDRKIAAERISRDEEVRSLEIARNRAVDSAEIAAREAVEINRIA
                     QERRLAAERIAADQDTRSRDIAREQAIEDAEIKRRETIEVARIEVELALERERIESSK
                     TRDVLDVERRKVLEIAEQNRSIEIAGKLTERADADRRVKEADIVAAQQVERTDVVREQ
                     MLDIARLERRRAVEQFEVARSQALQEAEIAAREEVERARIASERGIDEARILRDRELR
                     QLEIARETAVETARMEGTIEIHQKSREQSAAHAEAEAARARAVEAEERVKTVREGEAA
                     RRRREVEVLIAEKEADEVRIAAAAEQVRATVQAEAQRLLNEAENVLSDAARTSIFRRR
                     LLERIEGIVRESVKPMEKIEGIRILQVDGLNGGGGRGGSRSATDEVIDSALRYRVQAP
                     MIDQILAEIGIEGGSLSRMPGLIREARDMQGIRKETAPKRLPEDGGSGGGSGSGGGGS
                     SSEGAPGGGGSGSGRRKKE"
     gene            complement(14669..15562)
                     /locus_tag="VNY79_09355"
     CDS             complement(14669..15562)
                     /locus_tag="VNY79_09355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate hydrolase family protein"
                     /protein_id="HWX72695.1"
                     /translation="MPRVPRSDILARFRAMKARGEPIIGAGAGTGISAKGEEEGGADL
                     IVIYNSGRYRMAGRGSLAGMMPFGDANGIVVDMAREVLPVVGRTPVLAGVCGTDPFRQ
                     MDVFLDEILRLGFSGVQNFPTVGLIDGRFRTGLEETGMGYAREVEMIAKAHERDLLTT
                     PYVFDPAEAVAMARAGADVLVCHFGLTVGGSIGAATSTKLEDCPALTDVMAEAARAVN
                     RDVLILVHGGPIAEPADAEYVLAHARHCDGFYGASSMERLPVERALSAQVAKFKSIRK
                     TVNQSEEQARRGPHGRRAGRE"
     gene            complement(15567..>17649)
                     /locus_tag="VNY79_09360"
     CDS             complement(15567..>17649)
                     /locus_tag="VNY79_09360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Tm-1-like ATP-binding domain-containing protein"
                     /protein_id="HWX72696.1"
                     /translation="MGKTTLCKAIVGLLPVASGSIRFMGEELVGRTPAEIAQIGLGYV
                     PQGRRLWPSLTVEEHLRLAAGNDRSRWTIARIYETFPRLAERRNNRGNQLSGGEQQML
                     AISRALLLNPHLLVMDEPTEGLAPLIIEQVEEILIALGDQADIGVLVVEQNIGVATAV
                     AEKVAIMINGRINRVMEAARLEADRELQQRLLGVGQHGEAEPPEEAEPTSAPEGDRRP
                     ARARGPIRVYISNPAMPTRWSQPVPAAQIETAARTRTIAPEPAATATAPAVELRPIHR
                     GGSAPVIVAGTLDTKGDELRFIRDEIAAAGVRVVLVDLSTSGQPSPADVPPHHIATYF
                     RGGPNAVFTGERGAAITAMAEAFEAWVRRQELVGGLISAGGSGGSALVAPAMRSLPIG
                     VPKVLISSVASGNVAPYVGPSDIMMLYSVTDVSGLNSVSRQVLANGAAAVVGMVKARA
                     AASTDREAARRGSRNPAVGLTMFGVTTPCVQAVTAALEDDFECLVFHATGVGGQSMEK
                     LVDSGALSGVIDLTTTEVCDLLFGGVLPATEDRFGAIVRARIPYIGSCGALDMVNFGP
                     METVPERYRGRTLHVHNPTVTLMRTTPEENARLGRWIGERLNLMDGPMRFFLPEGGVS
                     ALDAPGRPFSDPSADEELFRALESTVRQTGSRRLVRMPEHINDPRFSAAIVAEFRRLF
                     GGRLVRRRAKG"
BASE COUNT         2732 a         5958 c         6012 g         2947 t
ORIGIN      
        1 caatccgaga gcgccggcct acagctcgat gaaggcgggc gtgatcgcgc tgacgaaatc
       61 gctcggcaag gaactcgcca cttacaacat ctcggtcaat tgcgtgacgc cggccgtcgc
      121 caagacggct atgggcatga gccaggatcc ggatttcttg gccatggtgg tttccaagat
      181 cccacgcggc cgcatgctcg agctggaaga ggcggcgtcc atgatctcat cgctcgcgac
      241 tgcggaaaac tccttcacca cgggcgccgc tttcgatctt tccggcggcc gggccaccta
      301 ttgaccggcg gaaaggctaa agcgcgccgg agttctgcat cggcgtattt ccatcgggag
      361 acgacagcgt gatgaggctc tactatgcgc ccggtgcgtg ctcactcgcc ccgcacatcg
      421 tgctcgagga ggtgggcgcc cgctacgagc tttcgcgtgt cgatctcgcg gccaaccagc
      481 agaacagcgc cgagtatctg cgcatcaatc cgaaggcgcg cgtgccggcg ctcatcgacg
      541 gcgactgggt gctgaccgag gcgccggcga tccttcgcta catagcggca cggcatccgg
      601 ccgcggggct ttggccgtgg gacccgcgcg aggaggcgcg ctgcgccgaa tggctcaatt
      661 ggatctcctc gacgatccat gtcgccttcg tccacgtccg gcgcgccgcc cgctatgcgg
      721 ccgacccgca cgccgtcgag gacgtcgcca ccaccgccag gaaaacgtgc cgcgatctgt
      781 ggggcgctgt cgaagacaag cttggtgacg ctccctgggc gatcggtgag cgctacagcg
      841 tcgccgatcc gtacctgctg gtctactgga cctgggggcg cggaccggtc ttggccttcg
      901 acatggcgca tgacttcccg cgctggacgg aacacgcgcg gcggctcgcc ggccggccgg
      961 cagtgcaacg cgcgttcgcc agcgaaggcc tcgcgctgcc ggcataggcc caagacacgc
     1021 cgcatcatcc gctcgtctcg gcgaaagcgg gacccacaaa aaaccgggcg agcacggcgc
     1081 gctgccgccg gatttccgct ggcgcgggaa tgagcggaag agaccggcta cctcagcgcg
     1141 gcgatgactt cgctcgattt tgtcaccgcg gcgacgttct gcatcgcgta ctggatggag
     1201 gcgcggtgcc aatcggcgtt catcgtcgag cagcagtcct ccggcacgat gacgaagtac
     1261 cccttgtccg ccccggtgcg ggccgtgtgc tcgatcgaca tgttggtcca ggcgccggtg
     1321 tcgatgatcg tgtcgcgtcc gcccgcgcgg agagtgattt caagtttgct gccttcgaag
     1381 gcgctcatgc gcaccttctc cacgacatgg tcgcccggct gcggctcgag gccggggacc
     1441 ggcgccgagc cccaggtgcc gcgcaccatc gccttcgagt cgaccaagcc ttcgaacagt
     1501 ggcgcgttga gcgtgacgcc gggcgctcct ggctcgacga cgaaccagac gtggatgatc
     1561 atcaccccgc gcgaccggca cgcttccgcc agtcggcgga tattctcgat gacgttctgc
     1621 tcgcgggcat gctgcggcga gccggaggcg gcgaacgcgc cgccgtccat caccacgtcg
     1681 ttctgcatgt cctggatgat gagggcgcag cgcgagggat cgaggttgag accgccgtgc
     1741 gcgctggcgc gctcgggcgc cgcagccgca gccgcaccgg ccgacgcgct cgcgcgcatg
     1801 aacggctcga cgcgtgggcc gactttggtg cgtacggcgt aaagtgaatg ggtggcgcac
     1861 atgaacaggg tgcgccagtc cgacttgccc caatgcaggt tggcgacggg ctccagcacc
     1921 ctgaccttgc cgacgagcgc gccggagcgg ttgtagaccc atacccctcc gggcgcggtc
     1981 acccagatgt tgccggcgct gtcgcatttc attccgtcgg gcacacccgg ctcgagctcg
     2041 gagcggatgc cggaggcgaa aatgcggtcg ccgccgagcg acccgtcggc gttcacgtcg
     2101 aacacgcgga tcaggcagcg caccgtgtca ttgacgtaaa gctgccgctc gtcgggcgag
     2161 aagcagagcc cgttcggttg atcgaacagg ttgcggtcga cgagaagctg cggttcgccg
     2221 ccgcccggcg gcacgcggta gacgccctgg aagccgagct gccgcggccg ctcgacgccg
     2281 tagaccggca tgcgcccgta ccagggatcg gagaaataga tcgagccgtc ggaacgcatg
     2341 cacacgtcgt tcgggctgtt gagctccttg ccgtcgaaat gcgaggcgat ggtctcgcgc
     2401 cggccgtcgc gttcgcggat caggctcgag gtcgcgtgct cgcagacgat gagcgcgagg
     2461 tttgcgtcgt aggtcatgcc gttgcacttg ttcgacggct gcatcacctc gcgcacgccg
     2521 ccgcgctcgt cgtaacggcg gcgcacgtcg gccggcatgt cggagaacag cagatactgg
     2581 tcgcgcgggt gccagatcgg tccttcggtg aaggtgaaac cgctggccac ccggtcgacc
     2641 ggcgcgtcga gatcgatcag gtcggaaaac tcgcggcgca gcgcggtgtg actcatcgga
     2701 acctccctcg ttatgccgga aaccaattgc gccggggcaa ggattggacc acaggcccgg
     2761 gcaccgcgtc ctgcaggcgg ccgaccacct gcccggcttc gatcagcgcc ggccggtcgt
     2821 ggaccggcag aacgaagcgc gacgaggcga ccaccttctt gatcgccgcc ttctcctgcc
     2881 gcttggtcgt gccgtggttg ccagtgacgc gcggttccat gtcgctgatt tcgcggaaag
     2941 gttcgaccag ctgatcgttg atgtcgtaga gcacgtcgcc gcagatcgtc gccacccctt
     3001 ccgccgtctt gacgatgacg ttcatcgagc cttcggtgtg gccgcccgcc gcctcgcaga
     3061 tcagtccggg catcaattcg gtcgggccgg agatttccag atcgagaaag cgcagcgcgc
     3121 ccttggtgtg gaggcgatcg atcagatgct tgatgtcgac cgcgggatat tgcggatgca
     3181 tcaggccgga gaccgaatat tcgagctcgc gccggttgag gacgaccgcg gtgttcatgg
     3241 gaaagagatc gtccttgccg gcgtgatcga tgtgcagatg cgtgtgcagg acgtagcgca
     3301 cgtcgccgag ccgcagtccg tgcttcttga gctggttctc gatcatgttc tcatgggact
     3361 gcatgccacg catgccgagc gtctccatga tctggttgga gcggtagccg gtgtcgatca
     3421 ccacaggcca agtgccgccg agcacgagaa agcccagcgt tggcacccgc cgcgtgcggc
     3481 cgcaatcgcg cccgagcacc agaaagctcg attcgagttc gatatcgccg tagtcgagga
     3541 tcttgatttc aagcgccatg cgttcctccc ccgcccggga tcaaattgtc ccaggtcaat
     3601 tgagccgata aacccttgcc gccgtgtcat ggagcgcggc acgggccgtt gcttcaccga
     3661 acggctcgag cgcacgccgg taggcggcaa cgagatcgga ataacgggtc cacagtttct
     3721 cgatcgggaa gttcgaacca aacaggcacc gcgccggacc gaacatgccg acggtctcct
     3781 tcaccatcgc cgcgatgtgg tcggggtcgt tgcgatggat gaaggtgccc agccccgaca
     3841 gcttgcaaac aacgttcggc cgcacggcaa gctcgcgcat gccgctgctc cattgcgccc
     3901 agcccgcggg ggaaagatcc tccagcatgc cggcatgctg caacacgaaa gtcactttgg
     3961 ggcagctgtc ggcgagttcg ccggcgctgg ccatctggcc ggcgaagacc tggagatcga
     4021 agctccagcc gtagtcagca agctgggcga cgttcttctg caaggtcggg tcgcgcgcga
     4081 ggtcgggctt cgccgcgaag cggtgttgcg ggttttcgtg ccagtgcagc tgcatccgca
     4141 ggccgcgcat gccgggatat ttgctcagcc ggtcgagctg cgggcgcacg tcggcagcga
     4201 ggaagtcggc gtagccgacg atcgcttgcg ggtagccagt ctcatcagca gcgcgctgta
     4261 cgtaggcgac ctcgtcggcg aacgcctcct tggcccaatt ggcctgcaca tagacggagc
     4321 ggacgatgtc gcagccggcg atatcggcaa ggtattcgct gatcggatag tcgcgccgga
     4381 tcggctcgta ggggccgaag atgcgcggct gcatcggccc ttcgagccac ggcagatcgg
     4441 cccgccgcca gatgtggtga tgggcgtcga taacggcgct catgccgccc tcaccttcgc
     4501 caggccgaga acgtgggcgc agatgctgtc gatcgagccg ccgttgccga gttcgtcgag
     4561 gaaaggccgc gccgcgacca aaccggcggt acgcgcctcg aagccggcat cggcggcgag
     4621 cggcgtcagc catacggtgc gccaggcgag ccgcgacagg tggtcgaccg cattgcgcat
     4681 ggcgctcggg tcgccgcgct cgaggccgtc cgaaagcacg acgaccgccg cgccgcgcgc
     4741 gagcgacgca aagcgcggaa cggcgagaaa ggcgccgagc gcctcgccga tgcgggtgcc
     4801 gccgtcccag tcggggacga gcagcgaggc cgcggtgagc gcctgcgcgc ggttcttcag
     4861 gcgcagcgcc cgggtgatgc gcgtgagccg cgtcccgatg gtaaagacct cgaccgaatc
     4921 ggcggcgcgg accagcgcgt gggcgaaggc gagatgcgcc tcggtgcgct ccttcatcga
     4981 gccggagacg tcgatgagga ggacgatccg gcgctgccgc agccggcgcc ggcgccggcg
     5041 catgtggatg aactcgccgg cattgcgcat ggcctcacga aacatccgcc gcacatcggc
     5101 cctcgggccg ccgcgcgcgg cacgccatcg gtacccgcgc cgccgcggca cgcgcgccgg
     5161 caggtcgcga gcgaagcggc gcagcgtctc gtcctcgctg ccgggggcga agcggcgcgc
     5221 cgcaagcctc tcggcgccgg tcgccttggc gccggattca tgcgtgtctt caccgaagat
     5281 cggctccggc ccgccggccg aatcgtcggc ggcgcgcggc ggctcctcgt cgctcggctc
     5341 cgcctccaat cctgggacca gcgcgccgag aaaatgcgcg ttaaacagcg catcgaattc
     5401 ggcgaagcgg tccggcggcg gggccagtgt agcgtgggcg gagcggcgga tatcgccgat
     5461 cccgttcggt cccaaaattt cgatcgcggc gagccaggcc atgatctgct cgggcgcgac
     5521 cgcaaaaccc gaacgccgca gcagagcagc gaaggcaagg aatggagcga tggtgcgcac
     5581 cacgtcgctc atgcctgcgc ctcggcgaga atggcgtcga tcttcggcgc cacatgcacg
     5641 aagtcgtcct cgtccttgag cgcgacaccg agcgagcggc ggaacgcatc cggccagcgc
     5701 gcgccctgct cgttgagcaa ggtcgccgcc tcggcccact cgacggtttc cgcgatgccg
     5761 ggacgcttcg ccagcggttc gcggcgcagt cgcccgacgg cggcgacaac ggcgcgcgcc
     5821 gcgcgctcgc cgacgcccga tgcccgcatc atcacgatgc gcatttcgcg ctccggcgaa
     5881 gggtattcga tccagtggta gacgcagcgg cggcgcaacg cctcgtgcag ctcgcgcgtg
     5941 cggttggagg tgaggatcac gaccggccgc tcgtaggcgc gtatcgcgcc gcgctcgggg
     6001 atcgatatct ggaagtcgga aagaaactcg agcaggaaag cctcgaactc ctggtccgac
     6061 cggtcgatct cgtcgatgag cagcacggtt tcttcgggac gacgaaggca ggcgagcatc
     6121 ggccgctcga tcagaaactc gtccttgtag atgtcgatgt ggccgccggc ggcggcctct
     6181 tggcgcagtg cgagcatctg gcgcggaaaa ttccattcgt agagcgccgc cgcggcgtcg
     6241 atgccttcgt agcattggag ccgcaacagg gcgcggccga gaacgccggc gatcgccttg
     6301 gccgcttcgg tcttgccaac gccaggcgcg ccttccagca gcagcggctt gcccagcgca
     6361 agcgcgagat acgccgcggt cgcaagctcc tcgtcggcga ggtaataggc ggcgcgcagc
     6421 gcgtcctcga gctcgcgcgg gctgccgatg ccgacgatgg tacggcgcac cgccatgcgc
     6481 gcttaccgcg ggcgcgccgc gggggccgcg ccgccgcgcg ccttcagcgc cctgaggatc
     6541 ttttccggcg tgatcggcag gtcgttgatg cgcacgccga cggcgttgaa cactgcattg
     6601 gcgacagccg gcagcactgg attggcgcac atctcgccgg ggcccttggc gccgaacgga
     6661 ccgtcgggag cgggacgctc gagcaccagg atgtcgtgcg ggcagatgtc gcccggaccg
     6721 ggcatcagat attcgttgaa gtcgcgcggc ccctcgcgcg tatccggata atagggctcc
     6781 ggggtctcat agagcgcgtg gctcatgccc atccaggagc cgccgacgag ctgctgctcg
     6841 acgagcttgg ggttgagcgc gcgcccgacc tcgtaggcgc tggtcatctt cagcaccgtc
     6901 acatcgccgg tctcgtcgtc gacttccacc tcggcgataa ggcaggcgtg ggcgtagcag
     6961 gtcgccggcg acatctcgcc ggtctccgga tcgacgtcgg agagcggcac cagaaaaatg
     7021 cctcgcccgg aaatggtgcg gccctggcgg aactgcgccg cgatggcgac gtcgcgcacc
     7081 gagatcgagc ggtgcggcgc gcctttgaca cggatcgagc ccttgccatc ggtctcgagg
     7141 tcgccgggat cgacctcgag ttcctccgcc gccgcctcca tcatcaccgc acgcgcctca
     7201 cgtgccgcca ccatcaccgc attgccgacg cggtgcgtgc cgcgcgaggc gaacgagccc
     7261 atacaatgtg gcccggtatc ggaatcggcg gtgtcgacgt aaacgtcctc gaccggcacg
     7321 cccagcgtct cggcgcagat ctgccgcgtc accgatttca tgccctggcc gaggtcgatc
     7381 gaggaaagag cgacggtgaa ttttccgctc ggattggagt ggaccagcgc ctggctcgga
     7441 tcgccgccga gattcatgcc gatcggatag ttgatggtcg caacgccgcg accgcggtgc
     7501 ttggccatga tcagcgcctc ctggtgccga agactgaaga gaagcgcggc gcgccatgcg
     7561 tcgaaccggc gggcgacgcc gccggtggcg gcggtacgct tcgcggcggg ggcgccggcg
     7621 gtgcgacagg cgcagcggcg gccggccgtt cgtagctcac gcgctgcggg gtgctcggcc
     7681 gcgccgtcgc cgcgggcgcg gcaggcgctg gcgcccgcgt acggtccgcg ccgccgacgg
     7741 tgcgcgccgc gtcgccaccc tgccgcgacg acatccggcg gaattcgtcg cgcagcggcc
     7801 aatgggcctt ttccgcggcg acctgcgcgc actcgatcag cgcacaattc ttcgcctcgc
     7861 gccggtgcgc cttcatgtcg ccatcgcgat aggcattgag gatgcggaat tcgagcgggt
     7921 ccacgccgat ggcgatggcg agcttgtcca tctggcactc cagcgcgaag tcgagcgcgg
     7981 tgacgccgaa gccgcgcatc gccgttgccg gcgtgcggtt ggtgaacacg caatacacgt
     8041 ccgcggagac gttcgggatc gtgtacggcc cggggatgtg ggcggcgcac ttgaccgcgg
     8101 cgtagcttga gaggcgcgta taggcgccgc tgtcgaaata cgccgtgacc ttacgggcga
     8161 cgatccgccc gtcgcgcatg acgccgtcct tgatgtagat gcgctcgccg ccgcgcggcg
     8221 agccgaactg catttcctcg tgccggctca gccgatggcg cacgggcgcg ccggtcaaac
     8281 gcgcggcgag aatggcgagc ggctcggtca aagtgtcgac cttgccgccg aagccgccgc
     8341 cgacggtgcc gccgatgaaa tgcaattggt tcgattgcat ggcgttgatc ttggccgagg
     8401 tgtcgagcga gaagaacagc gcctgcgtcg aggtgtagac gatgaagcgg ccgttggtgt
     8461 ccggcacggc gatcgagccg ttggtctcgg tcggagcgtg ctcgatcggc gacatctgat
     8521 agcgatcctc gagcacgatt tcggcctgcg cgaaacccgc gtccacgtcg ccaaagcgca
     8581 gcttctgatg atcgtacttc ccgtagtatt cgaaggtgtt tttcgggtag gcggcattga
     8641 ccgagaccgc tcccggcttc agcgcctcct cgacgtcgaa caccgccggc agtggatcgt
     8701 aggagacgcg caccatagcc agcgcctcct gggccgcgcg ctcgctggtc gcgacgatag
     8761 cgaggatcgg ctcgcccttg tagcgcacga cgtcggtggc gagcgatggc tcgtcgtcct
     8821 tgccgaactg gatgagactc aacagcgtgt tgagattgac cggcacgtcc gctccgcgaa
     8881 tgatccgctt gacaccgggc gcgcgcgccg ccgccgcatc gtcgatcgag cggatgcgcg
     8941 catgggcgtg cgggctgcgc agcagcttca gatgcaggag gttggcgaaa cggtgatcgt
     9001 cataataggg cgaggtcccg gtgacgtggc cgaggatgtc ctgccgctgc gtcggctggc
     9061 cgatctcttt caggttgtcg tcgcgttcgt cggcgaaaat gtccttgcgc aattcgagca
     9121 tgggtctgtc cctcaggcgc ggcggcggtt gtcgccgcgg gcggcatcaa gcaccgcctg
     9181 gatgatcggc tcatagccgg tgcagcggca gatattgccg cagatggcgt caaccacgtc
     9241 ttcccgcgtg ggggccgggt tgcggtcgag gagcgccttc gccgccatca gcatgcccgg
     9301 cgtgcaatag ccgcactggg cggcaaagcg ctccatgaag gcggtttgca gcggatgcag
     9361 atcggcgccg cggcgcagcc cggcgacggt ttcgaccgac ctgccggcgc agctttctgc
     9421 cagcgtgacg caggaaacgc gcggcgcgcc gtcgatcagc accgtgcagg tgccgcaggt
     9481 gccttgccag cagccgccct tgaccgagag atcgccgacc gactcgcgca gaacgtcgag
     9541 caagttggcg ccgctgtcga cgaaggcggc gacgtcctcg ccgttgagac gaaattgaat
     9601 gggcgtcttc atcgggcgtt cacgtttggc tggcgccgag caacagtcgg cgcaaatgga
     9661 cggggaggat ttctcgccgc caccaagcgc tggcgatggc atcgtcgacc ggcgaggtac
     9721 catcggtggc gacggcaagc gcgggcgcta ggccggcggc gtcgagcgtg cggccttcga
     9781 gagcgcgctc cgcagctttg gcacgaaccg gagttttgtc catggcgtta taggcgatcc
     9841 tcgcgccgtt gaccctgccg ctggcgagcg gcagctgggc ggcgatcgaa agcaccgaga
     9901 tgcccttggg atgaacgcgg gtgactttcg cgaaccggaa cgtctgcgcc accggccgct
     9961 tgaacgcgac gctcgccacc agagtcgcgc cgcgatcgcg gctgcggaga aattcttcga
    10021 gcggcacttc gcgctggccg aagccgccgg cgaacacgac cgtcgcatcg agggcgagca
    10081 gcgctgccgc gaaatcgccg tagggtgacg gcgcgaacaa attgccgccc accgtcgccg
    10141 cctcgcgcac ggccgggccg ccgaccgcgc gcgccacggg atggagaaac gccagttcgc
    10201 gctccgccag aatcgccgcc atggtcacac cggcgccgag ttccacgcgg ccggacgacg
    10261 ccgagatatg ggagaacgtc ggatcggtcg accgtacgat cgtttcgatg gccggatcgg
    10321 cctcattgac cgcgcgcatg accagcgtgc cgccggcgag aaaacgcgcc ccgcgctcgc
    10381 tcgacaacgc gccggccgca tcggccaagc gggcgaaagt ctttactgtt acgctcatgc
    10441 gcggccctcc aatcccgccg atgcggcaag ccgggaacga attgcggcaa agcccgcttc
    10501 ataaatgtcc tcgccgacca tccgcgtcat ctcctcctcc tcgcccttgc gcgtggagaa
    10561 cgagcaccgc cattcccaga acgtgcggtc gccgtcggtg accggcgcga gccgcacatg
    10621 ggcgacgtag ttgaacagcg gaaccggcgt gtccatcagg caatagctga aagtctgttc
    10681 aagatccgag agcgtcagca ggcgctcgcg cagctcggaa ccgtcgcgca ggaagaaacg
    10741 gcgcacgcag cccagcttgt ccgcactctg cccgcgctcg atcgcgctct tggcgacggc
    10801 gggatgccag cggtcatgcc cgttgaaatc gcgcagcagg gcccacacgc gatcggtcgg
    10861 cgcatcgatg acggtcgagc ggacgatgcg gatcacggcc tcatcctccg aactgccttt
    10921 tcagagcgtc gaagccgccc tggaaaacgc cgctgccgat gttcgacacc agctcggcct
    10981 cgcgttccag tgcgcagtcg aattccgccg tccactcgac gaaggtgcgg tcgccgtcgg
    11041 tgatcggcgt gagccgcagc gtcgccacgt agttctcgac ccccatcggc gattcgagga
    11101 tcgaataggt gcagaacaga tcgaagtcgg agaggccgag cagcttttcc cggatgcgat
    11161 cgccgttgcg caggcggaag tcgcgcacgc agccgacctt gtccgacggt tcgccgttct
    11221 cgatccggct ttccgcgatt cccggatgcc aggacggcaa tccgttgaaa tcgcggaccc
    11281 gcgcccagac gcggtcggag cggccgttga tgacgctcga gacgtagacg cgggccatgg
    11341 gcgtcattcc ttcttgcggc gcccgctgcc gcttccgcct ccgccagggg ccccctcgga
    11401 cgatgagccg ccgccaccgc tgccgcttcc gccaccgctg ccgccgtctt caggtagccg
    11461 cttcggcgct gtctccttgc ggatgccttg catgtcgcgc gcctcgcgga tgaggccggg
    11521 catgcgcgag agactgccgc cttcaatgcc gatctcggcg aggatctggt cgatcatcgg
    11581 cgcctgcacg cgatagcgca gtgccgaatc gatcacctcg tcggtggcgc tgcggctgcc
    11641 gccgcgcccg ccaccgccgt tgaggccgtc gacctgcaga atacggatgc cttcgatctt
    11701 ctccatcggc ttgacgcttt cgcgcacgat gccctcgatc cgctcgagca gccggcggcg
    11761 gaagatcgaa gtgcgcgctg cgtcggacag cacgttctcg gcttcgttga gcagccgctg
    11821 cgcctccgcc tgtaccgtgg cgcgcacctg ttcggcggcc gccgcgatgc gcacttcgtc
    11881 tgcctccttt tcggcaatga gcacctcgac ctcgcgccgg cgccgcgccg cttcaccttc
    11941 gcgcacggtc ttgacccgct cctcggcctc gaccgcccgg gcgcgcgccg cctccgcctc
    12001 ggcatgggcc gccgactgct cgcgcgactt ctggtgaatc tcgatggtgc cctccatgcg
    12061 cgcggtctca accgccgttt cgcgggcgat ctcgagttgg cgtagttcgc gatcgcgcag
    12121 gatgcgcgct tcgtcgatcc cgcgctccga ggcgatgcga gcgcgctcga cctcctcgcg
    12181 ggcggcgatc tcggcttcct gcagcgcctg gctgcgggcg acctcgaatt gctcgaccgc
    12241 gcgccggcgt tccagccgag cgatgtcgag catctgttcg cgcacaacgt cggtgcgctc
    12301 gacctgctgg gccgcgacaa tgtcggcctc cttcacccgg cggtcggcgt cggcgcgctc
    12361 ggtgagcttg ccggcgattt cgatcgagcg attctgctcg gcgatctcca gcaccttgcg
    12421 gcgctcgacg tcgagcacgt cgcgcgtctt cgacgattcg attctttcgc gctcgagcgc
    12481 cagctcgacc tcgatgcgcg cgacctcgat cgtctcgcgg cgcttgatct cggcgtcctc
    12541 gatcgcctgc tcgcgcgcga tgtcgcgcga tctggtgtcc tggtcggcgg cgatgcgctc
    12601 ggcggcaagc cgcctttcct gcgcgatgcg gttgatctcg accgcttcac gcgccgcgat
    12661 ctcggcgctg tcgaccgcgc gattgcgggc gatctcgagc gagcgcacct cctcgtcgcg
    12721 cgatatccgt tccgcggcga tcttgcgatc ctcgaggatg cggaccgttt ctacgatctg
    12781 gcgcgacgcg atctcggcgg attcgatcgc ttcgttgcgg gcgatctcca gaccgcgcgt
    12841 ctcccgatcg gcgtcgatgc ggtcggcggc gatcttcctg tcgagcgcaa tacgcgcgat
    12901 ctcggtcgat tcgcgggcgg cgatctcggc ggcatcgatg gccttgatgc gctcgatctc
    12961 gcggcttctg gtctcctcct cggagacgat gcggtcgacc gcgatcttct tctcctgggc
    13021 gatgcgggcg ccctcgaccg cctcgcgggc ggcgatctcc gcttcttcgg tcgaacggcc
    13081 ccgggcgatg tcaagcgccc gaacgcgttc ctcgtgcttg atgcgcgccg ccgccatcac
    13141 ctcgcgcgcg gcgatgtcgc tctcttcgag cgagcgcgtg cgttcgatct cgagcgtccg
    13201 cgtggcgagc tcggaggcga tgcggtccgc ggcgagcgcc ttttcgcgcg caatccgcgc
    13261 ttcctcggtg gccttgcccg cggcgatctc ctcctcgtcg atcgcgcggt tgcgtgcgat
    13321 ttcgcggcgg cggatttcct cttcgagcgc gatgcgctcg tcggtgacca cccgctcctg
    13381 cgcgatccgc gcccgctcgg tcgtctcgcg cgcggcgatc tctgcctgct cgacattgcg
    13441 catccgctcg atctcgagcc ggcggttctc ctcgtccttg gcgatgcgcg ccgcggtgac
    13501 cgcgagctcc tgggcgatgc gcgccttctc ggtttcctcg cgtgcggtga tctccgcctg
    13561 ctcgaccgcg cgcgtcttct cgatctcgcg ccgctggtct tcctcctcgc gggcgatgcg
    13621 cgcttccgtg atgacccgct cctgcgcgat gcgggcgcgc tcgacgcgct cgcgcgcggc
    13681 gatctccgcc tcgtcgagct ggcgggtacg ctcgatctcg cgctcgcgga tctcgcgctc
    13741 ggagatgatg cgcgcctcgg cgagggcgcg ctcgtgggcg atgcgcgtct tctccacctc
    13801 ctcgcgggcg gcgatctggg cctgctccgc ctcggtgtcg cgcagcgagc gctcgcgcgc
    13861 gagctcggcg cgctgcaccg cgcgccgcac ctcgatgtcg cgctcctgat taaggcgcgc
    13921 ggtctcgctc tcgcggtcga tatcgagtgc ctgcttctcg gcttcgagat tgcgggtgcg
    13981 gatgaggatc atcgagtcct gctcgatgtc gttgcgtagc ttgcgccgcg attcgatgtc
    14041 ctcgatgagc ttggtcaggc cttcggcatc gaagcggttt gacgggttga agaattcgag
    14101 gtcggtctgg tcgagatcgg tgatcgccac cgactcgacc tcgagcccgt tctgcgccag
    14161 cccttccagg gccgattcct tgacccgggt gacgtactcg ccgcggcgtt cgtgcatttc
    14221 caccatcgtc atctcggacg cgaccgaacg cagcgccgag acgaacttgc cggagaggag
    14281 cgcatcgagg tcggcgacgt tcgtggtgcg ccggccgagc gtagcggcgg cgatggtaac
    14341 cgcctccggc gtcggcggca cccgcacata aaactccgac tcgatgtcga cgcgcatgcg
    14401 gtccttggta atgagggcgt cgtcacggtt gcgcacgacc tgcatgcgca ggacgttcat
    14461 gttgaccggc gtgacctcgt gaatgaacgg gagcacgaag gcgccgctgt tgatcaccac
    14521 tttttcgccg aacagacctg tgcgcacgaa ggagagctcc ttcgacgaac ggcggtagag
    14581 ccagttgacg aaatagacga cgatcgcgat gacgatgacc gcgaggatca gccagatgat
    14641 caggctacca aggatggcga cggacatctt actccctccc agcccgccga ccgtgtggtc
    14701 cgcggcgggc ttgttcttca ctctgattta cagttttccg gattgatttg aattttgcga
    14761 cctgcgcgga cagcgcccgc tcgaccggca ggcgctccat cgacgaggcg ccgtagaagc
    14821 cgtcgcagtg gcgggcgtgc gccagcacat attcggcgtc ggccggttcg gcgatcggcc
    14881 cgccgtgaac gagaatgagc acgtcgcggt tcaccgcacg cgccgcctcc gccattacgt
    14941 cggtcaacgc cggacagtct tcgagcttgg tcgatgtggc ggctccgatc gagccgccga
    15001 cggtaagccc gaaatggcag accaggacat cggcgccggc gcgcgccatc gcgaccgctt
    15061 cagccgggtc gaacacgtag ggcgtggtca gaagatcgcg ctcgtgcgcc ttggcgatca
    15121 tctcgacctc gcgggcgtag cccatgcccg tctcctcgag accggtgcga aagcggccgt
    15181 caatgagccc gaccgtcggg aagttctgca cgccgctgaa gcccagtcgc aaaatttcgt
    15241 cgagaaaaac gtccatctgg cggaacgggt cggtgccgca aacgccggcg agaaccggcg
    15301 tgcggccaac gaccggaagg acctcgcgcg ccatgtcgac gacgatgccg ttggcgtcgc
    15361 cgaacggcat catgccggcg agcgatccac gcccggccat gcggtagcgg ccggaattgt
    15421 agatgacgat caggtcggcg ccgccttcct cttcgccctt ggccgaaatg cccgtcccgg
    15481 cgccggcacc gatgatgggt tcgccgcgcg ccttcatggc gcggaaacgg gcgaggatgt
    15541 cggaacgcgg gacgcgcggc atgtcgctaa cccttggccc gccgccggac gagccgaccg
    15601 ccgaacagcc gccggaactc ggcgacgatc gccgccgaaa agcgcggatc gttgatgtgc
    15661 tccggcatgc ggacgagccg gcgcgagccg gtttgccgaa cggtcgattc aagcgcgcgg
    15721 aacaactctt cgtcagcgct gggatcagag aacgggcggc ccggcgcgtc gagcgccgat
    15781 actccgccct ccggcaggaa gaagcgcatc ggcccatcca tcagattgag ccgttcgccg
    15841 atccagcgcc ccaggcgtgc gttttcctcg ggcgtggtgc gcatcagggt caccgtcgga
    15901 ttgtggacgt ggagggtgcg gccgcggtag cgctcgggga cggtctccat cggcccgaag
    15961 ttgaccatgt cgagcgcgcc gcacgagccg atatacggga tccgcgcgcg cacgatcgct
    16021 ccgaaccggt cttccgtggc cggcaatacg ccgccgaaga ggagatcgca gacctcggtc
    16081 gtggtgaggt cgatcacacc cgacagggcg ccggaatcga cgagcttttc catcgactgc
    16141 ccgcccacgc cggtggcgtg gaagaccaga cattcgaaat cgtcctcgag cgcggcggta
    16201 accgcctgca cgcacggcgt cgtcacgccg aacatggtca gcccgaccgc cgggttgcgg
    16261 ctgccgcgcc gcgccgcctc gcgatcggtg ctggcggcgg cgcgcgcctt caccatgccg
    16321 accacggccg cggcgccatt ggccaggacc tggcggctta ccgaattgag cccggaaacg
    16381 tcggtcacgg agtaaagcat catgatgtcg gagggcccga catagggcgc cacgttgccc
    16441 gacgcgaccg aggagatgag taccttgggt acgccgatcg gcaatgatcg catcgccggg
    16501 gcgacgagcg cgctgcctcc cgagccgccg gcggaaatca ggccgccgac cagttcctgg
    16561 cggcggaccc acgcctcgaa cgcttccgcc atcgccgtga tcgcggcgcc gcgctcgccg
    16621 gtgaacaccg cgttcgggcc gccgcggaaa tacgtcgcaa tatggtgtgg cggcacgtcg
    16681 gccggcgacg gctggccgga ggtcgagagg tcgacgagga ccacgcgcac accggcggcg
    16741 gcgatctcgt cgcgaataaa gcgcagttcg tcgcccttgg tatcgagcgt tccggcgacg
    16801 atcaccggcg ccgatccgcc gcgatggatc gggcgtagct cgactgccgg cgcggtcgcc
    16861 gtcgccgccg gctcgggggc tatcgtgcgc gtgcgcgccg cggtctcgat ctgcgcggcc
    16921 ggcaccggct gcgaccagcg cgtcggcatg gcggggttcg agatatagac gcggatcggg
    16981 ccgcgggctc ttgccggccg ccggtcgcct tcaggcgccg acgtcggttc ggcctcctcc
    17041 ggcggctccg cctcgccgtg ctggccgacg ccgagcagcc gttgctgcag ttcacggtcg
    17101 gcctcgagcc gtgccgcttc catgacccgg ttgatccggc cgttgatcat gatcgcgact
    17161 ttctcggcga ccgcggtagc gacgccgatg ttctgctcga cgacaaggac gccgatatcg
    17221 gcctggtcgc cgagcgcgat caaaatctcc tcgacctgct cgatgatgag cggagcgagc
    17281 ccctctgtcg gctcgtccat taccagcaag tgtggattga ggagcagcgc acgcgagatc
    17341 gcgagcatct gctgctcgcc gccggagagc tggttgccgc ggttgttgcg gcgctcggcg
    17401 agccgcggaa atgtttcgta gatgcgggca atcgtccatc gcgaccggtc gttgccggca
    17461 gcgaggcgga gatgctcctc gacggtgagc gagggccaga gccggcggcc ctgcggcacg
    17521 tagccgaggc cgatctgcgc gatctccgcc ggggtgcggc cgacgagctc ctcgcccatg
    17581 aaccggatcg atccgctggc caccgggagc aggccgacga tcgccttgca caaagtcgtc
    17641 ttgcccatg
//
LOCUS       DATMQB010000323         6672 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1996779, whole genome shotgun sequence.
ACCESSION   DATMQB010000323 DATMQB010000000
VERSION     DATMQB010000323.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6672)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6672)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6672
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1996779"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            288..917
                     /locus_tag="VNY79_09365"
     CDS             288..917
                     /locus_tag="VNY79_09365"
                     /inference="COORDINATES: protein motif:HMM:NF014659.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgE/AlgH family protein"
                     /protein_id="HWX72697.1"
                     /translation="MHLRNCRRWIAAAAAMCLPATLLHAALSTEPEVSGRTSFAGQLL
                     IASPDLRQPAFDHAVILLARHSRGGALGIVINRMAEKRPIAGLLAAFGADASGVSDSV
                     RVFVGGPVEPGAGFVLHSAEYHRPETLDIDGRVALTIAPDVLGDIGRGKGPSKSLIAF
                     GYAGWAPGQLEGELTHGVWVMVPEDPALVFDTDRAEVWTEALALYKGGR"
     regulatory      1021..1148
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            1221..1616
                     /locus_tag="VNY79_09370"
     CDS             1221..1616
                     /locus_tag="VNY79_09370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018315684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72698.1"
                     /translation="MQPAIFIARLAGPLFVVIGIGILLNGAVYSAMITEAVHSPTLIY
                     FSGLSALLPGLAILNVHRTWTADWRVIITIFGWLLVIGGVIRIVLPQTTASLAGTIYS
                     GAAALPVVAVISIVLGAFLSFQGYRPANK"
     gene            1657..3699
                     /gene="thiC"
                     /locus_tag="VNY79_09375"
     CDS             1657..3699
                     /gene="thiC"
                     /locus_tag="VNY79_09375"
                     /EC_number="4.1.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013216339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomethylpyrimidine synthase ThiC"
                     /protein_id="HWX72699.1"
                     /translation="MNKHIAESDLAAPKVTTGPIVGSRKIYVRPDAAPDLKVPLREIA
                     LDASSGEPPVSVYDPSGPYTDPNATIDVERGLPRTRLDWVKERGGVEEYDGRPVQPVD
                     NGNVSGKHLARNFPNTPKPLRASSSHLPLEGGGRSHAVRSGGGDLRPSRIHPTPALRA
                     DPPPPGEGKTQPLTQLEWARAGVVTKEMIYIAERENLGRKQMHEAAPAAHDDGESFGA
                     AVPLFVTPEFVRAEVARGRAIIPSNINHGELEPMIIGRNFLTKINANIGNSAVTSSVE
                     EEVEKMAWAIRWGADTVMDLSTGRNIHNTREWIIRNAPVPIGTVPIYQALEKVDGDPV
                     KLDWECYKDTLIEQCEQGVDYFTIHAGVRLAYVPLTANRVTGIVSRGGSIMAKWCLAH
                     HKESFLYERFEEICDLMRRYDVSFSLGDGLRPGSIRDANDRAQFAELETLGELTKIAW
                     AKGCQVMIEGPGHVPLHKIKINVDKQLKECGEAPFYTLGPLVTDIAPAYDHITSAIGA
                     AMIGWFGTAMLCYVTPKEHLGLPDRDDVKEGVIAYKIAAHAADLAKGHPAAQLRDDAL
                     SRARFEFRWNDQFNLSLDPDTAREYHDETLPKEAHKVAHFCSMCGPKFCSMKITQDVR
                     DYAATLNDPAGAGASANGGALTAEAGMAQMSKKFLDLGAEVYVDQAVAAKESNKAL"
     gene            complement(4496..4663)
                     /locus_tag="VNY79_09380"
     CDS             complement(4496..4663)
                     /locus_tag="VNY79_09380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72700.1"
                     /translation="MLRGIATFELAWDISAAAAEQPNRQIVEIFESEIPDFSKYKLAK
                     PYVRWTRSCCE"
     gene            4853..5533
                     /locus_tag="VNY79_09385"
     CDS             4853..5533
                     /locus_tag="VNY79_09385"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase"
                     /protein_id="HWX72701.1"
                     /translation="MRRIFVLLALVLAAAASTATAAAAAERFPILQPEQMNAEQKKLL
                     DALLAGPRGGGDASPEAVQKMLRGGPFNAWMRSPDLGNRLQNVGAYIRYKTSLPLRLN
                     EFAILITAREWTSQYEWYAHYPLALKAGLDAKHADELALGKRPSAMKDDEAAVYDFCI
                     ELHRTRKVDDAAFNRALALFGEQGVVDLIGVSGYYTAVSMTLNVAHVMPPDGVPLPLK
                     PLNGTPSE"
     gene            complement(6486..>6672)
                     /locus_tag="VNY79_09390"
     CDS             complement(6486..>6672)
                     /locus_tag="VNY79_09390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72702.1"
                     /translation="SGQWTQSATPNSANPTVDVSIPVPDSWKTYTFYAFAYGGSQTRI
                     AVVGGSDDRTFDLSIAP"
BASE COUNT         1195 a         2233 c         2096 g         1148 t
ORIGIN      
        1 cgcctggctc gccaacaagc tcggcgcgct gggtgtgggg ctcgagcccg gccatctcgt
       61 cctcgccggt tcgttcaccc gcgtggtgtt cgccaagaaa ggcgacacgc tgcacgccga
      121 tttcggcgag ctcggcggcc tcgccgtgca gtttgtttga ttccttcctt tggccgccag
      181 ccgcctgcgc gttggcggcg cggcgctgtc ccgccgggcc gtcttgaaca tcgcgcgcgc
      241 ccgcgcgatc atcttgcggg gcgcgaggcg agggcgcggg gtgggtcgtg catctgcgaa
      301 actgccggcg ctggattgcg gccgctgcgg cgatgtgctt gccggcgacg ctgctgcatg
      361 cggcactatc cacggagccg gaggtttccg gccgcacgtc gttcgccggc cagctgttga
      421 ttgcgtcgcc ggacctgcgc cagccggcct tcgatcacgc cgtcattctg ctggcccggc
      481 acagccgtgg cggcgcgctc ggcatcgtca tcaatcggat ggccgagaag cgcccgatcg
      541 ccggcctgct ggcggcgttc ggcgccgacg ccagcggcgt ctccgacagc gtgcgcgtat
      601 ttgtcggcgg gccggtcgag ccgggagccg gtttcgtcct gcacagcgcc gagtatcacc
      661 gtccggaaac actcgacatc gacggccggg tggcgctgac catcgcccct gacgtgctgg
      721 gtgacatcgg ccgcggcaag gggccgagca agagcctgat cgccttcggc tatgccggtt
      781 gggcgcccgg acagctcgag ggcgagctca cccacggcgt ctgggtaatg gttcccgagg
      841 atccggcgct ggtgttcgac accgaccgcg ccgaggtctg gaccgaggcg ctcgcgcttt
      901 ataagggcgg ccgctaggtg gcggcattcg ttccgaggcg attgctgcag tgccgcagcc
      961 gttgcccttc ggctgcgggc cgccgccgcg ttgacatgcc ccgccggctg cctacattga
     1021 gtgcgttccg aggggagctc ccaggaggga gctgagaaac cgccgccggg ctgttggccc
     1081 gcaaccgcgg aaaccctttg aacctgatcc gggtcatacc ggcgaaggga caggaatgtt
     1141 ttccacggtc aatacgcccc aaaaccatca ttcgccccgc ggccgcgaag acgcttcgcg
     1201 ccggccgccg cggtgatcac atgcagcccg caatcttcat cgctcggctc gccggcccgc
     1261 ttttcgtggt gatcggcatc ggcatcctgc tcaacggagc agtctattcg gcgatgatca
     1321 ccgaagccgt gcacagcccg acgctgattt atttctccgg cctgtccgcg ctcctccccg
     1381 gcctcgccat cctcaacgta catcggacat ggaccgccga ttggcgcgtc atcatcacca
     1441 tattcggctg gctgctcgtg atcggcggcg tgatccgcat cgtgctgccg caaacgaccg
     1501 cgagccttgc cggtacgatc tattccggcg cagcggcgct gccggtcgtc gccgtcatct
     1561 ccatcgtgct cggcgccttt ctcagcttcc agggttatcg gccggcgaac aaataaccgc
     1621 ggccggaaca acaacggaat gaaacggagt gcatcgatga acaagcatat cgccgaatcc
     1681 gaccttgccg cgcccaaggt cacgaccggc ccgatcgtcg gctcgcgcaa gatctacgtg
     1741 cggccggacg cggcgcctga cctcaaggtg ccgctgcgcg aaatcgcgct cgatgcttcg
     1801 tccggcgagc cgccggtctc ggtctatgac ccgtccggcc cgtacaccga tccgaacgcg
     1861 acgatcgacg tcgagcgcgg cctgccgcgc actcgcctcg actgggtgaa ggagcgcggc
     1921 ggcgtcgagg agtatgacgg ccgcccggtg cagccggtcg acaacggcaa tgtcagcggc
     1981 aagcacctgg cgcgcaattt cccgaacacg ccgaagccgc tgcgcgcttc ttcttctcac
     2041 ctccccctgg aggggggagg tcgatcgcac gcagtgcgat cgggtggggg tgacctgcgg
     2101 ccttcgcgaa ttcaccccac cccggcgctc cgcgccgacc ctccccctcc aggggagggt
     2161 aagacgcagc ccctgaccca gctcgaatgg gcgcgggccg gcgtcgtcac caaggagatg
     2221 atctacatcg ccgagcgcga gaaccttggg cgcaagcaga tgcacgaggc cgcgccggcg
     2281 gcgcatgatg acggcgagag ctttggcgcc gcggtgccgc tgttcgtgac gcccgaattc
     2341 gtgcgtgcgg aagtggcgcg cggccgcgcc atcatcccct cgaatatcaa ccacggcgaa
     2401 ctggagccga tgatcatcgg ccgcaacttc ctcaccaaga tcaacgccaa tatcggcaat
     2461 tccgccgtca cctcctcggt cgaggaggag gtggagaaga tggcgtgggc gatccgctgg
     2521 ggcgccgaca cggtgatgga tctttccacc ggaaggaaca tccacaacac ccgcgaatgg
     2581 atcatccgca acgcgccggt gcccatcggc accgtgccga tctaccaggc gctggagaag
     2641 gtcgacggcg accccgtgaa actcgactgg gagtgctaca aggacacgct gatcgagcag
     2701 tgcgagcagg gcgtcgacta cttcacgatt cacgctggcg tgcgcctcgc ctatgtgccg
     2761 ctcaccgcca accgcgtcac cggcatcgtc tcgcgcggcg gctcgatcat ggccaagtgg
     2821 tgcctcgccc accacaagga gagcttcctc tacgagcgct tcgaggagat ctgcgacctg
     2881 atgcgcaggt acgacgtgtc gttctcgctc ggcgacggct tgcgccccgg ctcgatccgc
     2941 gacgccaacg accgcgccca gttcgccgag ctggagacgc tcggcgagct caccaagatc
     3001 gcctgggcca agggctgcca ggtgatgatc gaaggccccg gccacgtccc gctgcacaag
     3061 ataaaaatca acgtcgacaa gcagctcaag gagtgcggcg aggcgccgtt ctatacgctc
     3121 gggccgctgg tcaccgacat cgcgccagcc tacgaccaca tcacctcggc gatcggcgcc
     3181 gccatgatcg gctggttcgg caccgccatg ctctgctacg tcacgccgaa ggagcacctc
     3241 gggctccccg accgcgacga cgtcaaagag ggcgtcatcg cctacaagat cgccgcccac
     3301 gccgccgacc tcgccaaggg ccacccggcg gcgcagctcc gcgacgacgc gctctcgcgc
     3361 gcccgcttcg agttccgctg gaacgaccag ttcaacctct cgctcgatcc cgacaccgcc
     3421 cgcgaatacc atgacgagac gctgcccaag gaggcgcaca aggtggcgca cttctgctcc
     3481 atgtgcggcc cgaaattctg ctccatgaag atcacccagg acgtgcgcga ctacgcggcg
     3541 accttgaacg atccggcggg ggccggcgca tcggcgaacg gcggcgcgct gacggcggag
     3601 gcgggcatgg cgcagatgtc gaagaagttc ctcgacctgg gcgcggaggt ctatgtcgat
     3661 caggccgtgg cggcgaaaga aagcaacaag gcactctaaa cgccgtagcc gtagatacca
     3721 tgtggcgatg ggcatgcagg tgttcgatgc ttgcatccga catgctgcga tggttcgagt
     3781 ctgcaaaccc aaacctatcg gatgcgtgcc catcgccaca tggtatctac gctcgctgcc
     3841 tcaaccacgc attcgccgta gggatgaaag cgtaagtcga gggcgcgatg tcggcgacaa
     3901 tctcgtttgt ttacttacca actggggctt ggccgccaag cgccaagtga gagtaggcga
     3961 tggctccctc gcgttgagct tgatttggat caatgcaccc gtactctcat gccaataagt
     4021 tacccgacaa gcgaggacag gaggatctat gagaaagctc gttgcgctcg gcttggtcgt
     4081 attcggaggc gtgattgtca cgcggttgtt accgcgagac ttgcgcgctc gcccgtctgt
     4141 cgcgatgagg cattggatgg ccaagcacat ggaacaaatg atggcgagcc ttccagcgaa
     4201 cgctccaccc aaactggtca tgtccattct gccaaaactg caggctcaac acgaacagat
     4261 tatcgcgcta ctgcaggaac agaacgcact tcttcggcaa cggcagcctg ccgctcctgg
     4321 atgaggcagg tgctcgaccg agtgcacgca ctttcaaagc cgcccgatcg tctctagcag
     4381 gccaaggaag cttcactcaa cgcccgtcgg cgctcttgta gctcacgacc taatcgagct
     4441 tgcatttatc ttttcggtca acgtcgtcca ctgcacccgc tccgtaatgg agagatcatt
     4501 cgcagcagct gcgggtccat cgcacatagg gctttgccag cttgtatttg gagaaatcgg
     4561 gaatttcgct ctcgaaaatc tcgacaatct gacgattggg ctgctcggcc gcggcagcgg
     4621 aaatatccca tgcaagctcg aacgtggcga tgccacgcag caagcgtagc ccggatggag
     4681 cgaagcgaaa tccgggggca agcctcttcg cccaatcccg cattgcgctt cgctccatac
     4741 gggctactga tggattgctt cgtcgtccca cgcctcgcaa cgacattgct cgatccgggc
     4801 gacttgctcc acaatcgaac gccggaaagt cccgccgtaa ggagaaaaca ccatgcgccg
     4861 catctttgtg ctgctcgcgc tcgtgctcgc cgctgccgcc agtactgcca ccgccgcggc
     4921 cgccgccgag cgctttccga tcctgcagcc cgagcagatg aatgccgagc agaagaagct
     4981 gctcgacgcg ctgctcgccg gcccgcgcgg cggcggcgat gcgagccccg aagcggtgca
     5041 gaagatgttg cggggcgggc cgttcaatgc ctggatgcgc agccccgatc tcggcaaccg
     5101 gctgcagaac gtcggcgcct acatccgcta caagacctcg ctgccgctgc ggctcaacga
     5161 gttcgcgatc ctgatcaccg cgcgcgaatg gacctcgcaa tacgaatggt acgcgcacta
     5221 tccgctcgcc ctgaaggcgg gactcgacgc caagcacgcc gacgagctcg cgctcggcaa
     5281 gcggccctcc gccatgaagg acgacgaggc ggcggtttac gatttctgca tagagcttca
     5341 ccgcacgcgc aaggtcgacg atgcggcctt caaccgcgcg ctcgcgctgt tcggcgagca
     5401 gggcgtagtc gatctcatcg gcgtgagcgg ctactacacc gccgtctcga tgacgctcaa
     5461 tgtcgcccac gtgatgccgc cggacggcgt gccgctgccg ctcaagccgc tcaacggcac
     5521 gccgagcgag tgagtgcgcg cagcccggat gccgggcggc gaaatccgga acgagcctcg
     5581 ccgcccaatc ccgcaatacg cttcgctcca tgcgggctac tttccgtcgg caatgacgaa
     5641 cgcgcctcct tctcccgtgt gcggggagaa gggtcgggat gagggggcct ttcggctcgg
     5701 ctcagaattg cggcaaagcc ccctcacccg gattgcttcg caatccgacc tctccccgca
     5761 cgcggggaga ggtgagcgcc agcgaatcat gcgcgccgcg cgcttttttc agaaaagcgc
     5821 agcgcgcgaa acgtcctgaa tcatcggcac aaattcaaat cctttgactt tgccgccgcg
     5881 atgacaataa ccgcgccgtc tcgctcttcg ttaagggacg tcaaccggtg acgccgactg
     5941 acggagcggg tgcggttcct gcgggcgggg gctcgtcact cccgcttccg ggcggtccgg
     6001 gcatcgaccc ctccggcact acgaccgggg cgcggggtgc tcagcttaag cgcgattctc
     6061 ggcgaaggta acgccttcgc accgggtttc gcgtgaagcg cggcctgggc tgagtagcga
     6121 aatccggggt aggcctcgtc gcccaatccc ggattgcgct tcgacgcgac cgggccgcca
     6181 cggcggcgat gactacgaat gtccattgct atcggattgt gaagtgggcc gatcagttgt
     6241 cattcccgcg ggcggctgca cctcgtactt gccgggcgcc aaattgtaga gcgaccactt
     6301 accattccgg tcggtgaaaa cagtgatctg gccctgcgga ccatgaaccg agaggggaac
     6361 gccggcctgc ggttttgagt cgggacccat aagtactccg gtcgctgctg gcgaaccttg
     6421 cccctgagcg gaaaccgtta tcaggcctcc gagcaacgca accgcggcgc agacgtggag
     6481 catcctcatg gcgcgatact cagatcgaat gtccggtcat cagatccgcc aacgaccgcg
     6541 atgcgcgttt gcgatccgcc gtaagcgaat gcatagaacg tgtaggtctt ccacgaatcg
     6601 ggtaccggaa tcgacacgtc cacggtggga tttgcagagt tcggcgtggc ggactgggtc
     6661 cactggccgg ag
//
LOCUS       DATMQB010000324         3685 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1072836, whole genome shotgun sequence.
ACCESSION   DATMQB010000324 DATMQB010000000
VERSION     DATMQB010000324.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3685)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3685)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3685
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1072836"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..482)
                     /locus_tag="VNY79_09395"
     CDS             complement(<1..482)
                     /locus_tag="VNY79_09395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72703.1"
                     /translation="MASQAMESMTRAFYARADLDLILASPVAVHRFFAVRIATVALSV
                     ALTALPLAVPFIDMLVVRGGWRWLGAYGVIAAMGAAAAAFAVVLTAALFHACGPKRTR
                     LVAQVVAAVVGAIDHKKEVTVVFKPSDPSGKPAQDEVTEGEVIKVDVQRDLALVRPRS
                     "
     gene            complement(482..727)
                     /locus_tag="VNY79_09400"
     CDS             complement(482..727)
                     /locus_tag="VNY79_09400"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72704.1"
                     /translation="MIQPGTALWFARHEARLAWRDWIAMMTAGRCERLWKVATGFAVF
                     VILMHAVAYSVVGRFAGATADKPMLVAITASLLLCGC"
     gene            complement(819..1599)
                     /locus_tag="VNY79_09405"
                     /pseudo
     CDS             complement(819..1599)
                     /locus_tag="VNY79_09405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847306.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
     gene            complement(1712..>3685)
                     /locus_tag="VNY79_09410"
     CDS             complement(1712..>3685)
                     /locus_tag="VNY79_09410"
                     /EC_number="1.1.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004470 - malic enzyme activity [Evidence
                     IEA];
                     GO_function: GO:0004471 - malate dehydrogenase
                     (decarboxylating) (NAD+) activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent malic enzyme"
                     /protein_id="HWX72705.1"
                     /translation="GKAVLFKRFADVDSIELEVSTEDPDEFINCVRFLGQTFGGINLE
                     DIKAPECFLIEQKLRELLDIPVFHDDQHGTAIIAAAGLINALDLTGRDIASTKLVCNG
                     AGAAGIACLELLKAIGFAPQNVILCDTKGVIYRGRLEGMNQWKSAHAVETKARTLADA
                     LEGADVFFGLSAKGSVTPEMVKTMAAKPIIFAMANPDPEITPEEVAAVRDDAIMATGR
                     SDYPNQINNVLGFPYIFRGALDVRARAINMEMKIAAAQALAELAREDVPDEVAVAYGA
                     RPKYGPDYIIPVPFDPRLISSIPPAVAQAAMDSKVARRPIVDMDAYRQQLRTRRDPIA
                     GVLQRVYERLRRQPRRVVFAEGEEEQVIRAAASFVHQGLGTALLVGREPRVRETALAL
                     GIELGGRIEIVNAAMSSRNAAYAAYLYERLQRRGFLQRDCQRLVNQDRNHFASCMVAL
                     GDADAMVTGVTRNFSVALDDVRRCIDPKPGHRVIGVSLVLARGRTVLVADTAVTEMPD
                     AIDIAAIAIEAAHVARSLGYEPRLALLAFSTFGQPPGERSQRVLEAVQLLDKQRVDFE
                     YDGDMAADVALNMELRDAYPFCRLSGPANVLIMPAFHSASISTKLLMELGGATVIGPM
                     LVGLDRSVQIVSLAANDAQIVNMAAVAAYNAGG"
BASE COUNT          628 a         1241 c         1263 g          553 t
ORIGIN      
        1 aaggaacgcg ggcgcaccag cgcaagatcg cgttgaacat cgacctttat gacctcaccc
       61 tccgtgactt catcttgcgc cggctttccg ctcggatcag agggtttgaa tacgactgtc
      121 acctccttct tgtggtcgat cgcgccgacc acggcggcca cgacctgcgc gacgagccgc
      181 gtgcgcttcg gtccgcaggc gtggaacagc gcggccgtga gcacgaccgc gaacgccgcc
      241 gccgcggcgc ccatggcggc gatcaccccg taggcgccga gccagcgcca gccgccgcgc
      301 acgaccagca tatcgatgaa cggcaccgcg agcggcagcg ccgtcagcgc gaccgacagc
      361 gccacggtcg caatacgcac ggcgaagaac ctgtgcaccg cgaccggcga ggcgaggatc
      421 agatcgaggt cggcgcgtgc atagaaggcg cgcgtcatcg attccatcgc ctgcgatgcc
      481 atcagcagcc acacagcagc aagctcgcgg tgatcgccac cagcatcggc ttgtccgcgg
      541 tcgcgccggc aaaacggccg accaccgaat aggcgaccgc gtgcatcagg atcacgaaga
      601 cggcgaagcc ggtggcgacc ttccacaggc gctcgcaccg gccagcggtc atcatcgcga
      661 tccaatcgcg ccaggcgagc cgcgcttcgt gccgcgcaaa ccacaacgcg gtgccgggtt
      721 ggatcatgga gcgacgcttg ccttcaccgt catcctgagg tgcgagcgac agcgagcctg
      781 gaaggatgcg gccgagccgc ccgggctcat tgggaacgtc acgccgcggc cgcggactcg
      841 gcgacgagcg cgaggaacgc atcttcaaga gtcgccgcgc cgccgccggc ggcgcccgcg
      901 tcgtcggcca tacgccgcgc ctggcggtgc agctcctcga gcgtgccctc ggcgatgagc
      961 cggccgtgcg cgatgacgcc gatgcggtcg gccatgcgct cggcgacttc caggatatgc
     1021 gtggtcatga tgatggcgcc gccaacgcgt acgcgttcgc gcagcacgtt cttgacctgc
     1081 cgcgcggagc cggcgtcgag cccggtcagc ggctcgtcga gaatgatgac gcgcgggtcg
     1141 tgcaccagcg cgccggcgag cgccaccttc tggcgcatgc ccttggaaaa gccctcgcag
     1201 cgctcatcgg catgggcggc gagatcgagc caatcgagca actcctgtgc acgcctctgc
     1261 cggcacgacg ccccacagcc cggcaacgaa ttccagatat tcccgcggcg tgagcttgtc
     1321 gtagatcatc ggctcgtcgg agatccacgc catgacccgc ttcgccgcca ccggatcggc
     1381 gaccgcatcg atgccggcga cgcggatcgc gccggcgtcg ggccgcgtca gcccggcgat
     1441 catgcgcaac gtcgtggtct tgccggcgcc gttcggtccg agcagcgcat aaaactcgcc
     1501 ggtgcgcacg gcaaggtcga gaccgtcgac cgcagggcgc tcgaagcgtt tgacgaggcc
     1561 gcggatttca agggcgcatg gcggcaaggg tgcgagcatt gccgtgttcc atcatcgtga
     1621 gacgaaaaaa gacggaaaac ggcttagtcg agagaggttt cggggtcgtg aatcggcggc
     1681 cgcgtttttt gcggcagggc gcgcacagcg ctcagccgcc ggcgttatag gcggcgaccg
     1741 ccgccatgtt gacgatctgg gcgtcgttgg cagcgagcga gacgatctgc accgagcggt
     1801 cgaggccgac cagcatcggg ccgatgacgg tcgcaccgcc gagctccatc aacagcttgg
     1861 tggagatcga ggccgagtgg aacgccggca tgatcagcac attggccggc ccggagaggc
     1921 ggcagaatgg ataggcgtcg cgcagctcca tgttgagcgc cacgtcggcg gccatgtcgc
     1981 cgtcgtattc gaaatcgacg cgctgcttgt cgaggagctg caccgcctcg agcacgcgct
     2041 gcgaacgctc gcccggcggc tggccgaagg tcgagaaggc gagcagcgcg agccgcggct
     2101 cgtagccgag cgagcgcgcg acgtgcgccg cctcgatggc gatcgcggcg atgtcaatgg
     2161 cgtccggcat ctcggtgacc gcggtgtcgg cgaccagcac cgtgcggccg cgcgccagaa
     2221 cgagcgagac gccgatgacg cgatggccgg gcttgggatc gatgcagcgg cgcacgtcgt
     2281 cgagcgcgac ggagaaatta cgggtgacgc cggtcaccat ggcgtcggcg tcgccgagcg
     2341 ccaccatgca ggaggcgaaa tgattgcggt cctgattgac caggcgctgg cagtcgcgct
     2401 gcaaaaagcc gcggcgctgc agccgctcgt agagatacgc cgcgtaggcg gcattgcgcg
     2461 aggacatggc ggcgttgacg atctcgatgc ggccgccgag ctcgatgccg agcgccagcg
     2521 ccgtctcgcg cacacgcggc tcgcggccga ccagaagcgc cgtgcccagc ccctggtgca
     2581 cgaagctcgc cgccgcgcgg atcacctgct cctcctcgcc ctcggcaaag accacgcgcc
     2641 gcggctgccg gcgcagccgc tcgtacacac gctgcaggac gccggcgatc ggatcgcgcc
     2701 gcgtgcgcaa ttgctgccgg taggcgtcca tgtcgacgat cggccgccgc gcgaccttcg
     2761 agtccatcgc cgcctgcgcc accgccggtg gaatggacga gatcagccgc ggatcgaacg
     2821 gcaccggaat gatgtagtcg gggccgtatt tcggccgcgc gccgtaggcc accgccacct
     2881 cgtcgggcac gtcctcacgc gccagctcgg ccagcgcctg cgccgcggcg atcttcatct
     2941 ccatgttgat cgcccgcgcg cgcacgtcga gcgcgccgcg gaagatgtag gggaagccga
     3001 gcacgttgtt gatctggttg ggatagtcag agcgccccgt cgccatgatg gcgtcgtcgc
     3061 gcacggcggc gacttcttcc ggcgtgatct cgggatcggg attggccatg gcgaagatga
     3121 tcggcttcgc ggccatcgtc ttcaccatct cgggagtgac cgagcccttg gccgagaggc
     3181 cgaagaagac gtcggcgcct tcgagcgcgt cggcgagggt acgcgccttg gtctcgaccg
     3241 catgggccga cttccactgg ttcatgcctt ccaggcggcc gcgatagatc acgcccttgg
     3301 tgtcgcacag gattacgttc tggggcgcga aaccgatcgc cttgagcagc tcgaggcacg
     3361 cgataccggc ggcgccggcg ccgttgcaca cgagcttggt gctggcgatg tcccggcccg
     3421 tgagatcgag cgcattgatg aggcccgccg cggcgatgat ggcggtgccg tgctgatcgt
     3481 catggaatac cggaatgtcg agcagctcgc gcagcttctg ctcgatcaaa aaacactcgg
     3541 gcgcctttat gtcttcgagg ttgatgccgc cgaaggtctg gccgagaaag cgcacgcagt
     3601 tgatgaattc gtcgggatcc tccgtcgaca cttcgagctc gatcgagtcg acgtcggcga
     3661 accgcttgaa cagcaccgcc ttgcc
//
LOCUS       DATMQB010000325         2466 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4467422, whole genome shotgun sequence.
ACCESSION   DATMQB010000325 DATMQB010000000
VERSION     DATMQB010000325.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2466)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2466)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2466
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4467422"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(360..>2466)
                     /locus_tag="VNY79_09415"
     CDS             complement(360..>2466)
                     /locus_tag="VNY79_09415"
                     /inference="COORDINATES: protein motif:HMM:NF014732.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="exopolysaccharide transport family protein"
                     /protein_id="HWX72706.1"
                     /translation="RPGGGNQFGDAESDLPALGAALWRNKWQIVRPTVLAALIAIAVV
                     EMIVPKYLSEARVLIEGRDNVFLRPNADKDLIDRGTVDQEAVTSQVQLILSRDLASEV
                     IDKLKLGERPEFDPAIAGISPLKKVLGIIGVIKNPMRMTPEERVLDAYYDRLQVFPVE
                     KSRVIVIDFLSEDPKLAAEVANTIAEAYLVRQQAAKQQQARAAGEWLAGEIETMRQKV
                     ADAEAKVEAFRSNSNLLVGPNNTTLSAQSLGDVNAQLAAARAQKGDAQSKAKLIREML
                     RSGGPLESSDILNSELIRRLSEQRVTLRAQLAEQSSSLLGNHPRIKELKAQIADLDKQ
                     IRAEADMLAHSLENDAKLADARVDTLAASLDQLKSQAAGTNEQDVQLRALERDAKSER
                     ELLESYLAKYREATARDTINSAPADARVISRATVSNVPAYPKKLPTVLIASPAVMVLC
                     SGWVLTRELLAAPVATAPRPSRIGVGRRRRAPAIADAAPARFASLPDRALPAAGVPVA
                     AIKEVAADVDGGGGPIAVFGVARGLDATGIAIKLARALAENGGRVVLVELGSGDEAIK
                     AISSDPSAGGLAELAAGTASFSGIITKDKQSALNLITSGRMPADRLTILSAPGMAPTF
                     AALARSYDHLVLDAGALGGPEMTAIAEIAPHAFLLTETATGAATAAGRERLIDAGFDD
                     VTVLVGARAGVAAAGAAAA"
BASE COUNT          385 a          824 c          836 g          421 t
ORIGIN      
        1 ggccgggacg gacggacgtg gtgcagcgtc aggatggcgc cgaccccgcc gacaaaacgc
       61 ttcagcgcgc gatgcgcgcc actgaagtag agcccctcca gcccgctgcg gatgatcgtc
      121 tgtttgagcc cgctcaccga tagttccctt ctcggacgca cactattccg tccttcactc
      181 ccgatccttt gccgccgtcg cggcggggtc aactccgtgc actctgtcct ccccagtttc
      241 ctcacctttg gcgggtcgag caaaagcgcg tcacggtgtc aacgcggcgc gagctgcaag
      301 ggccacgtgt gccctgcgac cgtatttcgc gcggtctcgc tccacgtcga ggaaaagcgc
      361 taggccgcgg ctgctccggc cgcggcaacg ccggcgcgcg cgccgacgag cacggtcaca
      421 tcgtcgaagc cggcgtcgat caggcgctcc cgccccgcgg cggttgccgc gccggtcgcc
      481 gtctcggtga gcaggaacgc gtgcggcgcg atctcggcga tggcggtcat ctccggtccg
      541 ccgagtgcgc cggcatctaa gaccaaatgg tcgtagctgc gcgccagcgc ggcaaaggtc
      601 ggggccatcc cgggcgccga taggatcgta agccgatctg ccggcatccg ccccgacgtg
      661 atgagattaa gcgcggactg cttgtccttg gtgatgatgc cgctgaatga tgccgtcccg
      721 gcggcaagtt cggcaaggcc gccggccgat gggtcgctgg aaatcgcctt gatggcctca
      781 tcgcccgaac cgagctcgac cagcaccacc cggccgccgt tttccgccaa ggcgcgcgcg
      841 agctttatgg cgatgccggt cgcgtccaat ccgcgcgcga cgccgaacac ggcaatcggg
      901 ccgccgccgc cgtccacgtc ggcggcgact tccttgatcg cggcaacagg aacgccggcg
      961 gccgggagcg cccgatccgg cagcgaagcg aatctcgcgg gcgcggcatc ggcgatcgcg
     1021 ggcgcgcgcc ggcggcggcc cacgccgatg cgggaggggc gaggcgcggt ggcgacggga
     1081 gcggcgagaa gctcgcgggt aagcacccaa ccggaacaga gcaccatcac cgccggcgac
     1141 gcgatcagca cggtcggcag ctttttcgga taggcgggaa cgttcgagac cgtagcgcgc
     1201 gaaatcacgc gggcgtcagc cggcgccgaa ttgatggtgt cgcgcgcggt cgcctcgcgg
     1261 tatttggcga gataggattc gagcagttcg cgctccgatt tggcgtcacg ctcgagcgcg
     1321 cgcagctgca cgtcctgctc gttggttcca gccgcctggc tcttgagctg atcaaggctt
     1381 gcggcaagcg tatcgacgcg cgcgtcggcg agcttggcat cgttttccaa cgaatgcgcc
     1441 agcatgtccg cctcggccct gatctgcttg tcgaggtcgg cgatctgcgc cttgagctcc
     1501 ttgatgcgcg gatgattgcc gagcagtgac gacgactgct cggcgagctg cgcgcgcaag
     1561 gtgacccgct gctcggagag ccgacggatg agctcggaat tgagaatgtc cgaggattcg
     1621 agcgggccac cggaacgcag catttcccgg atcagcttgg ccttggactg cgcgtccccc
     1681 ttctgcgcgc gcgcggcggc gagctgcgcg ttcacgtcgc caagcgactg cgcggagagc
     1741 gtcgtattgt tggggccgac caggagattg gagttggagc gaaacgcctc caccttcgct
     1801 tcggcgtcgg ccaccttctg acgcatggtt tcgatctcgc cggcgagcca ttcgcctgcg
     1861 gcgcgtgcct gctgctgctt cgccgcctgc tggcgcacca ggtaggcctc ggcaatggtg
     1921 ttggcgactt cggcggcgag tttcgggtcc tccgacagaa agtcgatgac gatgacgcgc
     1981 gacttctcca ccgggaagac ctggagacgg tcgtaatagg catcgagcac gcgctcttcc
     2041 ggcgtcatcc gcatcgggtt cttgatcacg ccgatgatgc cgagcacctt cttgagcggc
     2101 gagatcccgg caattgccgg gtcgaactcc ggccgttcgc cgagcttgag cttgtcgatc
     2161 acctcgctgg cgagatcgcg cgaaaggatg agttgcacct ggctggtcac cgcctcctga
     2221 tcgacggtgc cacggtcgat gagatccttg tcggcgttcg gacgcaggaa gacattgtcg
     2281 cgcccttcga tgaggacgcg ggcctccgac agatatttgg gcacgatcat ctcgaccacg
     2341 gcgatcgcga tcaacgccgc gagcacggtc gggcgcacga tctgccattt gttgcgccag
     2401 agcgccgcgc cgagcgccgg caggtcggac tccgcatcgc cgaactggtt gccgcccccg
     2461 ggccgc
//
LOCUS       DATMQB010000326         2324 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1998462, whole genome shotgun sequence.
ACCESSION   DATMQB010000326 DATMQB010000000
VERSION     DATMQB010000326.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2324)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2324)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2324
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1998462"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..232
                     /locus_tag="VNY79_09420"
     CDS             <1..232
                     /locus_tag="VNY79_09420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="divergent polysaccharide deacetylase family
                     protein"
                     /protein_id="HWX72707.1"
                     /translation="PFAKADIVLDAVPTPDEIDRALGRLEMTARERSLAVGIASALPV
                     SLEHIGKWAKAAESRGLLLVPITAVVMKEKQS"
     gene            345..842
                     /locus_tag="VNY79_09425"
     CDS             345..842
                     /locus_tag="VNY79_09425"
                     /EC_number="3.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA pyrophosphohydrolase"
                     /protein_id="HWX72708.1"
                     /translation="MPPFESLSYRRCVGMTVLNRAGLAFIGRRVDGPEHTDNVHVWQM
                     PQGGIDRGEDSWPAALRELREETNITSVQRLGKIAGWLTYDIPREIVGQAWNGKYRGQ
                     KQKWYALRFTGDDSEIDIEHPAGGHKPEFVEWRWEELQNLPELVVPFKRQVYERVVAE
                     FAKFA"
     gene            complement(867..1283)
                     /locus_tag="VNY79_09430"
     CDS             complement(867..1283)
                     /locus_tag="VNY79_09430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_041805105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HWX72709.1"
                     /translation="MAALHFDLVSPERVLFSGDVDQVDLPGAEGDMGILAGHAPLVTA
                     LRPGILTIFRGGAREPIVIGGGVAEVGPGGLTVLADHAVALESFDAMTLAADIKDAEE
                     DMADTTDQEQRDKLARRLDQLKALQAALAARTSTAH"
     gene            complement(1369..>2324)
                     /gene="atpD"
                     /locus_tag="VNY79_09435"
     CDS             complement(1369..>2324)
                     /gene="atpD"
                     /locus_tag="VNY79_09435"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006196669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HWX72710.1"
                     /translation="GVGKTVLIMELINNVAKAHGGYSVFAGVGERTREGNDLYHEMIE
                     SKVINLEGSSKAALVYGQMNEPPGARARVGLTGLTVAEYFRDQGQDVLFFVDNIFRFT
                     QAGSEVSALLGRIPSAVGYQPTLATDMGALQERITTTNKGSVTSVQAIYVPADDLTDP
                     APATSFAHLDATTVLSRSIAEKGIYPAVDPLDSTSRMLDPRVVGEEHYEVARRVQQIL
                     QRYKSLQDIIAILGMDELSEEDKLTVARARKIERFLSQPFHVAEVFTGSPGVFVDLAD
                     TIRGFKGLCEGKYDHLPEAAFYMVGTIEQAVERSKKLAEAA"
BASE COUNT          406 a          749 c          779 g          390 t
ORIGIN      
        1 gccgttcgcc aaggccgaca tcgtgctcga cgcggtgccg acgccggacg agatcgaccg
       61 cgcgctcggc cgcctggaaa tgacggcgcg cgagcgcagc ctcgccgtcg gcatcgcctc
      121 ggcgctgccg gtgtcgctcg agcacatcgg caaatgggca aaggcggcgg aaagccgcgg
      181 tctgctgctc gttccgatca ccgcagtggt gatgaaggag aagcagagct gatctggaac
      241 ggcgaatagc gaaatggtga agtagtgaat agagttgccg gcgcgacaac cattcaccag
      301 ttcgccaatc gccagtttac cagtcgctac tcgccattca caaaatgccg ccgttcgaat
      361 ccctctccta tcgccgctgc gtcggcatga ccgtgctcaa tcgcgccggc ctcgccttca
      421 tcggccgccg cgtcgacggc cccgagcaca ccgacaacgt ccacgtctgg cagatgccgc
      481 agggcggcat cgaccggggc gaggactcct ggccggcggc tctgcgcgag ctcagggagg
      541 agaccaacat cacctcggtg caacgcctcg gcaagatcgc gggatggctg acctacgaca
      601 ttccgcgcga gatcgtgggg caagcctgga acggcaagta ccgcggccag aagcagaagt
      661 ggtacgcgct gcgtttcact ggcgacgaca gcgagatcga catcgagcat cccgccggcg
      721 gacataagcc ggaattcgtg gaatggcgct gggaggagct gcaaaacctt ccggagctgg
      781 tcgtgccgtt caagcgccaa gtctacgagc gcgtggtcgc cgagtttgcg aagttcgcct
      841 gagcgccggc ggcgccagcc gggggatcaa tgcgcggtcg atgtcctggc ggcaagcgcc
      901 gcctgcagcg ctttgagctg atcgagacgg cgcgcaagct tgtcgcgctg ctcctgatcc
      961 gtggtgtcgg ccatgtcttc ctcggcatcc ttgatgtcgg cggcgagcgt catggcatcg
     1021 aagctctcaa gcgccacggc gtggtcggcg agcacggtga ggccgccggg tccgacctcg
     1081 gcgacgccgc cgccgatgac gatcggctcg cgcgcgccgc cgcgaaagat ggtgaggatc
     1141 cccggccgca gcgccgtcac cagtggcgca tggccagcga gaatgcccat gtcgccctcg
     1201 gcgccgggca ggtcgacctg atccacgtcg ccggagaaca gcacgcgctc aggggagacg
     1261 agatcgaagt gaagtgcggc cattgggtgt gtcccgagcc tgatctggat gcgaacagcg
     1321 aatggggacc tccatcagtt cccattcgcc atttcactat tcgccctgtt acgccgcctc
     1381 ggcgagtttc ttgctgcgct cgaccgcctg ctcgatggtg ccgaccatat aaaaggccgc
     1441 ctcgggcagg tggtcgtatt tgccctcgca cagccccttg aagccgcgaa tggtatcggc
     1501 gagatcgacg aaaactccgg gtgatcccgt gaatacttcc gccacgtgga acggctgcga
     1561 caggaagcgc tcgatctttc gcgcccgcgc cacggtgagc ttgtcttcct cggagagctc
     1621 gtccatgccg agaatggcga tgatgtcctg caacgatttg tagcgctgca ggatctgctg
     1681 cacgcggcgc gccacctcat aatgctcctc gccgacgacg cggggatcga gcatgcgcga
     1741 ggtcgaatcg agcgggtcga ccgccggata gatgcccttc tccgcgatcg atcgcgacag
     1801 caccgtggtg gcgtcgaggt gcgcaaagga ggtcgccggc gccggatcgg tgaggtcgtc
     1861 ggccggcacg tagatcgcct gcaccgaggt caccgacccc ttgttcgtcg tggtgatgcg
     1921 ctcctgcagc gcgcccatgt cggtcgccag ggtcggctgg tagccgaccg ccgaggggat
     1981 gcggccgagc agcgccgaga cttccgagcc cgcctgcgtg aagcggaaga tgttgtcgac
     2041 gaagaacagc acgtcctggc cctggtcgcg gaaatactcg gcgacggtca gcccggtgag
     2101 gccgacgcgg gcgcgcgcgc ccggcggctc gttcatctgg ccgtagacca gcgccgcttt
     2161 cgacgagccc tcgaggttga tgaccttcga ttcgatcatc tcgtgataga ggtcgttgcc
     2221 ctcacgggtg cgctcgccga cgccggcgaa gacggagtag ccgccatgcg ccttggcgac
     2281 gttgttgatg agctccatga tcagcacggt cttgccgacg ccgg
//
LOCUS       DATMQB010000327         4578 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2614708, whole genome shotgun sequence.
ACCESSION   DATMQB010000327 DATMQB010000000
VERSION     DATMQB010000327.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4578)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4578)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4578
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2614708"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1152
                     /locus_tag="VNY79_09440"
     CDS             <1..1152
                     /locus_tag="VNY79_09440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016614 - oxidoreductase activity, acting
                     on CH-OH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GMC oxidoreductase"
                     /protein_id="HWX72711.1"
                     /translation="LDAFRKAAEQAGIKSVADFNTGDNEGCCAFHVNQKRGRRWSAAR
                     AFLKPALHRPNLRLETGCLVEAVVFDGRRAAGVRWRRGGELRTARCRGEVILAAGSIG
                     SAQIMLLSGIGPAQHLREHGIPVIADRPGVGANLQDHLQLRLIYKVDGITTLNERYHS
                     PLGRASMIAEYALFRRGPLTMAPSQLGLFTRSDPDQDRANLQYHVQPLSLERWGQPLH
                     AFPAFTASVANLRPTSRGTVRLRSRDPAEKPAIKPNYLSTDADRRVAAGAIRLTRRIV
                     AQPALAPFHPAEYLPGAAVADDEPSLLKAAGDIGTTIFHPVGTAKMGLASDPSMVVDE
                     RLRVAGVERLRVIDASVMPTITSGNTNAPTMMIAEKGAALIRADAGRPA"
     gene            1152..1730
                     /locus_tag="VNY79_09445"
     CDS             1152..1730
                     /locus_tag="VNY79_09445"
                     /inference="COORDINATES: protein motif:HMM:NF016764.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0031267 - small GTPase binding [Evidence
                     IEA];
                     GO_process: GO:0006888 - endoplasmic reticulum to Golgi
                     vesicle-mediated transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Yip1 family protein"
                     /protein_id="HWX72712.1"
                     /translation="MNAIARTATLLVDPSAGWTRVEKEPGDAIFLLSGYVAVLALIPA
                     LAGFIGASLIGVMVPGGDVVREPIFDGLFSAVLGYAATFVQVLLVALLIDVLAPRFGG
                     QRSFANALNLAAYSFTPVWLAGIFLLLPGLRFLGFTALYGVYLLTKGLPVVMKSPAEN
                     AKRYAAAVAVFAVALMILTALAQSALFSHPRA"
     gene            complement(1743..2693)
                     /gene="mepA"
                     /locus_tag="VNY79_09450"
     CDS             complement(1743..2693)
                     /gene="mepA"
                     /locus_tag="VNY79_09450"
                     /EC_number="3.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018386993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0030288 - outer membrane-bounded
                     periplasmic space [Evidence IEA];
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-insensitive murein endopeptidase"
                     /protein_id="HWX72713.1"
                     /translation="MFARVRLGLRGVARHRALRLGLVLLLVVLAPALAQEAGPRGEKQ
                     RSPADADLLSRPAKELFSRQTKPLPLAAHSIGFYSQGCLAGAVALPINGATWQVMRSS
                     RNRNWGHPKLIAFLERLAGKAKKIGWNGLLVGDLSQPRGGPMPSGHNSHQVGLDADIW
                     FTPMPSRKLSREEREGVSAIDMVREDRLDVDPEVWTRERTELIHTAAQEPEVERIFVN
                     AAIKKALCREAGSDRDWLAKVRPWSGHDHHFHVRIFCPADSPQCKPQPPPEPGDGCGH
                     ELDYWFSDAVVHPAPPTEPPKPPLTLAELPAACRAVLTAP"
     gene            complement(2693..3307)
                     /locus_tag="VNY79_09455"
     CDS             complement(2693..3307)
                     /locus_tag="VNY79_09455"
                     /inference="COORDINATES: protein motif:HMM:NF016246.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF488 domain-containing protein"
                     /protein_id="HWX72714.1"
                     /translation="MPRYDLFTIGHSNIPADRFIAMLRDAEVNAVADVRSVPNSRWFP
                     WFSAKPLADKLAGAGITYTMMGDALGGRPRDGSLYRDGVVDYEAIALQPEFVAGLDRL
                     TKEAARSRVCLMCAERDPLDCHRCLLIARRLAERGLAAGHILHDGTIEPHTATEERLL
                     ALDADAAGLFAAGESERLAAAYRHRAHAVGFKQKSQPSAARKKK"
     gene            3492..3923
                     /locus_tag="VNY79_09460"
     CDS             3492..3923
                     /locus_tag="VNY79_09460"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013895020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HWX72715.1"
                     /translation="MHRLVVAAFLAALSLAFLSGGERAEAGVMVQIDRGSQTMAVTVD
                     GISRYTWRVSTGRAGFGTPSGVFHPRSMSARWFSRKYYNAPMPHAIFFYGGLAIHGSY
                     DIAQLGGPASHGCVRLHPSAAAVLFGIVRREGMHNTTIVVR"
     gene            complement(4066..>4578)
                     /locus_tag="VNY79_09465"
     CDS             complement(4066..>4578)
                     /locus_tag="VNY79_09465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015929886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HWX72716.1"
                     /translation="AAPARCAKPVIAANRGYCFGVGFEISLACDFRIASETCFYALPE
                     QRLGQIPGSGGSARLQQIVGITRTKDIVMRSKRIPARQALDWGIATDCVADAELEAAT
                     DKLVDELRAFSPLAQRTAKKLLNDTEDATLSIAIELEGHCYSRLRQSDDFREGVEAFH
                     AKRPAKFRGS"
BASE COUNT          705 a         1531 c         1521 g          821 t
ORIGIN      
        1 ttggacgcgt tccgcaaggc agccgagcag gccggcatca aatcggtggc ggacttcaac
       61 accggcgaca acgagggctg ctgcgccttt cacgtgaacc agaagcgcgg ccggcgctgg
      121 tcggcggcgc gcgccttcct caagccagcg ctccatcgcc ccaatctgcg gcttgagacc
      181 ggttgcctgg tcgaagccgt cgtattcgat ggccgccggg ccgccggcgt gcgctggcgg
      241 cgcggcggcg agctgcgaac cgcgcgctgc cgcggcgagg tcatcctcgc tgccggctcg
      301 atcggatcgg cgcagatcat gctcctgtcg ggcatcggcc cggcgcagca tctgcgcgag
      361 cacggcattc cggtcatcgc cgaccggccc ggcgtcggag ccaacctgca ggatcacctg
      421 cagctccgcc tgatctacaa ggtcgacggc atcaccacgc tcaacgagcg ctatcactcg
      481 ccgctcggcc gcgcgagcat gatcgccgaa tatgcgttgt tccggcgcgg cccgctgacc
      541 atggcgccgt cgcagctcgg gctgttcaca cgttccgatc ccgaccagga tcgcgccaat
      601 ctgcagtacc acgttcagcc gctttcactt gagcgctggg gccagcctct gcacgcgttt
      661 cccgcgttca ccgcgagcgt cgccaatttg cggccgacga gccgcggcac cgtccggttg
      721 cgctcgcgcg atccggccga gaagccggcc atcaagccga actatctgtc gaccgacgcc
      781 gaccgccgcg tggccgccgg cgccatccgc ctgacgcgcc gcatcgtcgc gcagcccgcg
      841 ctcgcgccct tccatcccgc cgaatatttg ccgggcgctg ccgttgccga cgacgagccg
      901 tcgctgctga aggccgcagg cgatatcggc accaccatct ttcacccggt cggcaccgcg
      961 aagatgggcc ttgcgagcga tccttcgatg gtcgtcgatg agcgcctgcg cgtcgccgga
     1021 gtggagcggc tgcgcgtcat cgatgcctcg gtcatgccga cgatcacgtc cggcaatacc
     1081 aacgcgccga ccatgatgat tgcggaaaag ggcgcggcgt taatccgcgc cgacgccggg
     1141 cggccggcgt gatgaacgca atcgcgcgca cggcgacctt gctggtcgat ccttccgccg
     1201 gctggacgcg ggtcgagaag gaaccgggcg atgccatctt tctgctgagc ggctatgttg
     1261 ccgtgctcgc tctcatcccg gctttggcgg gcttcatcgg cgcgagcctc atcggcgtca
     1321 tggtgccggg aggcgatgtc gtgcgcgagc cgatattcga tggactgttc agcgcggtcc
     1381 tcggctacgc ggcaaccttc gtccaagtcc ttctcgtcgc gctgctgatc gacgtgctgg
     1441 cgccacggtt cggcggccag cggagctttg ccaacgcgct caacctcgcg gcctattcgt
     1501 tcaccccggt gtggctcgca ggaatttttt tgctgctgcc ggggctgcgc tttctgggct
     1561 tcaccgctct ctatggcgtc tatttgctga cgaagggtct gccggtggtg atgaagtcgc
     1621 cggcagagaa cgcgaagcgc tatgccgcgg cggtcgcggt cttcgccgtc gcgctgatga
     1681 tcctcaccgc cctcgcgcaa agcgcgctat tcagccaccc gcgcgcttga acgctcgcac
     1741 gcctacggcg ccgtcagcac ggcccggcac gcggcgggga gctccgcgag cgtgagcggc
     1801 ggcttcggcg gctccgttgg cggcgccgga tgcacgacgg catccgagaa ccagtagtcc
     1861 agttcatgcc cgcagccgtc gcccggctcc ggcggcggct gcggcttgca ctgcgggctg
     1921 tcggccggac agaagatgcg gacgtggaag tggtggtcat gaccggacca cggccgcacc
     1981 ttggcaagcc agtcgcggtc gctgccggcc tcgcggcaca gcgccttctt gatcgcggca
     2041 ttgacgaaga tgcgctcgac ctcgggttcc tgcgccgcgg tgtggatcag ctcggtgcgc
     2101 tcgcgcgtcc acacctcggg atcgacgtcg agccggtctt cccgcaccat gtcgatggcc
     2161 gacacgccct cccgctcttc gcgggatagc tttcgactgg gcatcggcgt gaaccagatg
     2221 tcggcatcga gcccgacctg atggctgttg tggccgctcg gcatcggacc gccgcgcggc
     2281 tgcgacaagt cgccgacgag gaggccgttc cacccgatct tcttcgcctt gccggcgagg
     2341 cgctcgagaa aggcgatgag cttcggatgt ccccaattgc ggttgcgcga cgagcgcatc
     2401 acctgccagg tcgcgccgtt gatcggcagc gccacggcgc cggcgaggca gccctgcgaa
     2461 taaaaaccga tggagtgcgc agcaagcggg aggggtttgg tttggcgcga aaacaattct
     2521 ttcgccggac gcgacagcag atcggcgtcg gcgggcgacc gctgcttctc gcctcgcgga
     2581 ccggcttcct gcgcgagcgc cggagcgagc acgacgagaa gcagcaccag gccgagccgt
     2641 agcgctcgat ggcgcgcgac gccccgcaga cccaggcgaa cccgtgcgaa cattatttct
     2701 tcttccttgc ggcgctcggt tgcgattttt gtttgaagcc gaccgcgtgc gcccgatgac
     2761 gatacgcggc ggcgagccgt tcgctttctc cagccgcgaa caagccggcg gcgtccgcat
     2821 cgagtgcaag cagccgctct tcggtcgcgg tatgcggctc gatggtgccg tcgtgaagaa
     2881 tatgtccggc ggcaagtccg cgttcggcga ggcgccgtgc gatcagcagg cagcgatggc
     2941 agtcgagcgg atcgcgttcc gcacacatca gacagacccg cgaccgcgct gcttccttgg
     3001 tcagccgatc gagcccggcg acgaattcgg gttgcagcgc gatcgcctca tagtccacga
     3061 cgccgtcgcg gtagaggctg ccgtcgcgcg ggcggccgcc gagcgcgtcg cccatcatcg
     3121 tgtaggtgat gcctgcgccc gcgagcttgt ccgccaatgg cttggcagag aaccagggaa
     3181 accagcgtga attcggcacc gaacgcacgt cggcgacggc attcacttcg gcatcgcgca
     3241 acattgcgat gaagcggtca gccggaatgt tggaatgacc gatggtgaag agatcatagc
     3301 gcggcatgac gaatgttgat cgacggggca ggcgatttca tggccggcca tgctcagccg
     3361 tgaacgggat catgagaaat cgacgctgat tgggctcgat cgattaactc ttgccgcggt
     3421 ctttggttta catcgccccg agtgcgccac aataatggcg gcggtgtttt gaggtgctgc
     3481 gggggttcgc tatgcatcgt ctggttgttg cggcttttct ggccgcattg tcgcttgcgt
     3541 ttctttcagg tggagagcgc gccgaagccg gcgtgatggt gcagatcgat cgcggcagcc
     3601 agaccatggc cgtcaccgtc gatggcatct cccgctacac ttggcgggtt tcgaccggca
     3661 gggccggctt cggcacgcct tccggcgtct tccatccgcg gtccatgtcg gcgcgctggt
     3721 tctcgcgcaa atactataac gcgccgatgc cgcacgcgat cttcttctac ggcggtctcg
     3781 ccatccacgg cagctacgac attgcccagc tcggcgggcc ggcatcgcac ggctgcgtgc
     3841 gcctgcatcc gagcgccgcc gccgtgctgt tcggcatcgt ccgccgggaa ggcatgcaca
     3901 acaccacgat cgtggtccgg tagaacaagt ttcgccgaga tcgacccgct cgagtccagg
     3961 cagaatccgt cgttcgtcat ggccggactt gttccggcga tccacgtctt tttcacgcac
     4021 ttttaagagg cggatgcccg cgacaagcgc gagctcggcg ccggattagc tgccgcggaa
     4081 ttttgccggc cgtttggcgt ggaaggcttc gacgccttcg cggaaatcat cagactgccg
     4141 cagccggctg tagcaatggc cttcgagctc gatggcgatc gagagcgtcg cgtcttcggt
     4201 atcgttcagg agcttcttgg ccgtgcgttg cgcaagcggc gagaaggcgc gcagctcgtc
     4261 gaccagcttg tcggtcgccg cttcgagctc ggcgtcggcg acgcagtcgg tcgcaatacc
     4321 ccaatcgagc gcctgcctgg cgggaatgcg cttcgagcgc atcacgatgt ccttggtccg
     4381 ggtgatgccg acgatctgct gcagccgggc ggagccgccc gatcccggga tctggccgag
     4441 ccgctgctcc ggcagggcgt agaagcaggt ctccgaggcg atgcggaaat cgcaggcgag
     4501 cgaaatctcg aacccgacgc cgaagcaata gccgcggttc gcggcgatca ccggcttggc
     4561 gcaccgcgcc ggcgctgc
//
LOCUS       DATMQB010000328         2067 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_757467, whole genome shotgun sequence.
ACCESSION   DATMQB010000328 DATMQB010000000
VERSION     DATMQB010000328.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2067)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2067)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2067
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_757467"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1153
                     /locus_tag="VNY79_09470"
     CDS             <1..1153
                     /locus_tag="VNY79_09470"
                     /EC_number="6.3.5.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003952 - NAD+ synthase
                     (glutamine-hydrolyzing) activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0009435 - NAD biosynthetic process
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NAD+ synthase"
                     /protein_id="HWX72717.1"
                     /translation="TEAGLPLIYVNQVGGQDELVFDGASFALNADRSIAFQLPAFREC
                     VVTTQWTRAGGVWQCARGPMAPALDFDQADYTACMLGLRDYVDKNRFRGVVLGLSGGI
                     DSALCAAMAVDALGPERVRCVMLPFRYTSQASLDDAAAIARALGVQYDVVPIESAVRG
                     LEEVLTAVFAGAPRDVTEENLQARARGTILMAISNKFSLMVVTTGNKSEMSVGYATLY
                     GDMNGGFNPIKDLYKTEVFRLARLRNSWKPEGVLGPNGPVTPENVLTRAPSAELRENQ
                     TDQDTLPPYEVLDQILERLVEREEPLASIVAAGFDRETVMKVERMLALAEYKRRQAAP
                     GVKVTLKNFGRDRRYPITSRFRDPGTAPPAPDRTLLKSPVIAKAGAADF"
     gene            complement(1217..>2067)
                     /locus_tag="VNY79_09475"
     CDS             complement(1217..>2067)
                     /locus_tag="VNY79_09475"
                     /inference="COORDINATES: protein motif:HMM:NF022515.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF2865 domain-containing protein"
                     /protein_id="HWX72718.1"
                     /translation="AAQSHRVGCEGIAGFFSLFTGQSQQCQPLNAQIQQIRGNLDRMM
                     SDLERLKSGNTDREGQRRVVIAQLAQNNCGAQYSRAAAQTPGPGGFLETLLGGIINPG
                     GGEGGPAGTYRTVCVRTCDGFFFPVSYSTVPDHFADDQRTCQRMCPASEAMLYSYRNS
                     GEDITQAVSIGGRTYTELPNAFRYRREFTSNCSCRRPGQSWADALKNSDDSTTLEQGD
                     IVVTEQNSKALSQAPQKGAAGKPKGGAAQPKADPIPAPAIADAPSADQPKGPVRTVGP
                     PFVASH"
BASE COUNT          327 a          668 c          712 g          360 t
ORIGIN      
        1 caccgaggcg ggcctgccgc tgatctatgt gaaccaggtc ggcggccagg acgaactggt
       61 gtttgatggc gcatcgtttg cgctcaacgc cgaccgatca atcgctttcc agcttccggc
      121 tttccgcgaa tgcgtcgtca ccacgcagtg gacgcgcgcc gggggtgtct ggcaatgcgc
      181 gcgtgggccg atggcgccgg ccctcgattt cgaccaggcc gactataccg cctgcatgct
      241 cgggttgcgc gattacgtcg acaagaaccg tttccgcggc gtcgtgctcg ggctttccgg
      301 tggcatcgat tcggccctct gcgcggccat ggccgtggac gcgctcgggc ccgagcgcgt
      361 gcgctgtgtg atgctgccgt tccgctacac ctcgcaggcc tcgctcgacg acgccgcggc
      421 gatcgcgcgc gctctcggcg tgcaatacga cgtggtaccg atcgagagcg cggtgcgcgg
      481 gctcgaagag gtgctcaccg ccgtctttgc cggcgcgccg cgcgacgtca ccgaagagaa
      541 cttgcaagca cgcgcccgcg gcaccatcct gatggcgatc tccaacaagt ttagcctgat
      601 ggtggtgacg accggcaaca agtcggaaat gtccgtcggc tatgcgacgc tctacggcga
      661 catgaacggc ggcttcaatc cgatcaagga cctgtacaag accgaggtgt tccgcctggc
      721 gcggctgcgc aactcctgga agccagaggg cgtgctcggt cccaatgggc cggtcactcc
      781 cgagaatgtg ctgacacgcg cgccgagcgc ggagctgcgc gagaatcaga ccgaccagga
      841 cacgctgccg ccctacgagg tgctcgacca gatccttgag cggctcgtcg agcgcgagga
      901 accgctcgcc tcgatcgttg ccgccggctt cgatcgcgag acggtgatga aggtcgagcg
      961 catgctcgcg ctcgccgagt acaagcgccg ccaggcggcg ccgggcgtga aggtcacgct
     1021 gaagaacttc gggcgcgacc ggcgctatcc gattaccagc cggttccgcg accccgggac
     1081 ggcgccgccg gcgcccgacc gcacgctgct caagagcccg gtgatcgcca aggcgggcgc
     1141 ggcggatttt tgatcttggt cgccgggcgt gccgccttgc ggcgcccgat gaccggagcg
     1201 attgtttaag ttgaactcaa tgcgacgcga cgaacggcgg tccgacagtg cgcacggggc
     1261 ccttcggctg atcggcgctg ggcgcgtcgg cgatcgccgg cgcgggaatg ggatcagctt
     1321 tcggttgcgc agcgccgccc ttcggcttac cggcggcgcc cttctgcggc gcctgcgaca
     1381 gggcttttga gttctgctcg gtcaccacga tgtcgccttg ctcgagcgtc gtgctgtcat
     1441 cggaattctt cagcgcgtcg gcccaactct ggccggggcg acggcacgag cagttggagg
     1501 tgaattcgcg ccggtagcgg aaggcattgg gcagctcggt ataagtacgc ccgccgatcg
     1561 acacggcctg cgtaatgtcc tcgccggagt tgcgatagga atagagcatg gcttccgagg
     1621 ccggacacat ccgctggcag gtgcgctgat cgtcggcgaa atggtcgggt accgtcgagt
     1681 aggagacagg gaagaaaaag ccgtcgcagg tgcgcacgca gacagtgcga taagtaccgg
     1741 ccggtccgcc ctcgccgccg cccgggttga tgatgccgcc gaggagggtc tcgaggaaac
     1801 cgcctggccc cggggtctgt gccgcggccc tgctgtactg cgctccgcaa ttgttctgcg
     1861 ccaattgcgc gatgacgacg cggcgctggc cttcgcggtc ggtgttgccg ctcttgagcc
     1921 gttccagatc gctcatcatg cggtcgagat tgccgcggat ctgctggatc tgcgcgttga
     1981 gcggctggca ctgctgtgac tggccggtga acagggagaa gaaccccgcg atcccttcgc
     2041 agccgacacg gtgcgactgc gccgcca
//
LOCUS       DATMQB010000329         3803 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2002253, whole genome shotgun sequence.
ACCESSION   DATMQB010000329 DATMQB010000000
VERSION     DATMQB010000329.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3803)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3803)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3803
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2002253"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(9..995)
                     /locus_tag="VNY79_09480"
     CDS             complement(9..995)
                     /locus_tag="VNY79_09480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="J domain-containing protein"
                     /protein_id="HWX72719.1"
                     /translation="MRDPYEVLGVDRKAGEAEIKSAFRRQAKKLHPDANKNDPKAASR
                     FAELNAAYEILGEEDKRKAFDRGEIDAEGKPRFHGYEGFGGGGGRRAGGFAPESEFET
                     FSFGPEGFTRSTRPGRGAGAGGFEDILREAFGGAAGRGRHGGGPGDAFEAQDFGVGAD
                     VRAALTVTLPEAAHGVTQRVHLPSGKDLEVKIPAGIADGQTIRLRGQGMAGPGGAGDV
                     LITVSVAEHPIFTLEGADVRLDLPITLDEATLGAKVRVPTLDRPVEITIPPWTSSGRT
                     FRLKGKGFPAKEGHGDLLATVRIALPERSDPELEALMRKWRSEKPYDPRQGM"
     gene            complement(1117..1521)
                     /locus_tag="VNY79_09485"
     CDS             complement(1117..1521)
                     /locus_tag="VNY79_09485"
                     /inference="COORDINATES: protein motif:HMM:NF028308.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RT0821/Lpp0805 family surface protein"
                     /protein_id="HWX72720.1"
                     /translation="MIGLIAVGGCSYQLSSFTPKDGADMEQTGALGRPQQQAEAVPPP
                     EVDLVYARAVAADALARSGKDDSVPWHNPNTGAGGNITPLAVSYTAGTFTCRDFLASY
                     VRGQTEAWLQGEACRTGHGKWEVKSLTPLNRG"
     gene            1656..2297
                     /gene="pdxH"
                     /locus_tag="VNY79_09490"
     CDS             1656..2297
                     /gene="pdxH"
                     /locus_tag="VNY79_09490"
                     /EC_number="1.4.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004733 - pyridoxamine phosphate oxidase
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_process: GO:0008615 - pyridoxine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase"
                     /protein_id="HWX72721.1"
                     /translation="MTDAASIEHPTELTAGDFTAADEPLRLFAAWFADAERAEPVNPN
                     AMTLATVDRDGLPNARMVLLKGFDERGFVFYTNVDSVKGRELSATPKAALTFYWKTLQ
                     RQVRLRGSVEPVAADEADSYFATRSRMAQIGAWASNQSAPLESRMAFEKAVARYTAKF
                     GIGAVPRPPHWSGYRIVPQEIEFWQERPFRLHDRIAFSRSSPTAPWRKARLYP"
     gene            2419..3162
                     /locus_tag="VNY79_09495"
     CDS             2419..3162
                     /locus_tag="VNY79_09495"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX72722.1"
                     /translation="MPTSNQPRRTLLLTGASRGIGHATVKRFSAAGWRVLTSSRHPFP
                     ENCPWEAGPEDHIQVDLADAENTDAAIAEVKRRLNGELHALVNNAAISPKADGGKRLG
                     SIDTSREDWHHVFQVNFFAPIMLARGLLDELKAAKGSVVNVTSIAGSRVHPFAGAAYA
                     TSKAALAALTREMAADFGALGVRVNAIAPGEIDTAMLSPGTEKIVEIIPMHRLGTPDE
                     VAKIIYVLCTETSSYVNGAEIHINGGQHV"
     gene            3171..3794
                     /locus_tag="VNY79_09500"
     CDS             3171..3794
                     /locus_tag="VNY79_09500"
                     /inference="COORDINATES: protein motif:HMM:NF013488.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015035 - protein-disulfide reductase
                     activity [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HWX72723.1"
                     /translation="MEQDVKEVKMYSDFKSPYAFLAFDPALALEDKYRIRLKWKPFQL
                     RLKGKGERSRYSEYKVKYSYMDARRWANMRGGLMIRGPLKIFDTTPALIGGLYADKNG
                     RLREYGNRVFELFFKRELAADEADAIAGVIASIGLSDAGYREYLGGEGAAAYEHAQEE
                     AVTEQVFGVPMFYFENEPFWGYDRMGLLEQRLTEAGLKREEPRRRAV"
BASE COUNT          664 a         1278 c         1247 g          614 t
ORIGIN      
        1 cagcgcgctc acatcccctg gcgcggatcg tagggcttct cgctgcgcca tttccgcatc
       61 agcgcttcga gctcggggtc gctccgttcc ggcagggcga tccgcaccgt ggcgaggagg
      121 tcgccgtgcc cttccttggc cgggaagccc ttgcccttga ggcggaacgt gcgcccgctg
      181 ctggtccaag gtggaatcgt gatctcgacc ggccggtcga gggttgggac gcgtaccttg
      241 gcgccgagcg tcgcctcgtc gagcgtgatc ggcaaatcga gccgcacatc ggcgccttcg
      301 agcgtaaaga tcggatgctc tgcgaccgag acggtgatga gcacgtcgcc ggctccgccc
      361 ggcccggcca tcccttgacc gcgcagccgg atcgtctggc catcggcgat gccggcgggg
      421 atcttgactt cgaggtcctt gcccgacggc aggtgcacgc gctgtgtgac gccgtgcgcc
      481 gcctccggca gcgtcacggt caacgccgcc ctgacgtccg ctccgacgcc gaaatcctgc
      541 gcctcgaagg cgtcgccagg cccgccgcca tgacgcccgc gaccggccgc accgccgaag
      601 gcttcccgga gaatgtcttc gaacccgccg gcgccggcgc cgcggccagg gcgcgtggaa
      661 cgggtaaagc cttcaggacc gaagctgaaa gtctcgaatt ccgactcggg cgcgaagccg
      721 cccgcgcggc gtccgccgcc gcccccaaat ccctcgtagc cgtggaaacg cggcttaccc
      781 tcggcgtcga tctcgccgcg gtcaaaggct ttgcgcttgt cttcctcgcc gagaatttcg
      841 tacgcggcat taagctcggc aaagcgcgag gcggccttgg ggtcgttctt gttggcgtcg
      901 gggtgcagct tcttcgcttg gcgccggaag gcgctcttga tctcggcctc acccgccttg
      961 cgatcgacgc ccagcacctc ataggggtcg cgcattcccc atgaactccg ctttcaattt
     1021 cgggccggcc ccgcccgccc atcggcacaa tgtgggattt attcagctgc cctgcaatgc
     1081 agcaccgaat cggtgcgctc gcccaatgat agccgatcag ccgcggttga gtggcgtcag
     1141 gcttttcacc tcccacttgc cgtgaccagt gcggcaggcc tctccctgca gccaggcctc
     1201 cgtttgcccg cgcacgtagc tcgcaaggaa atcgcggcag gtgaaggtgc ccgcggtata
     1261 ggaaacggcg aggggcgtaa tgttgccgcc ggcaccggtg ttcggattgt gccagggcac
     1321 gctgtcgtcc ttgccgctgc gggcgagcgc atccgcggcg accgcgcgcg catagacgag
     1381 gtcgacctcc gggggcggga cggcctcggc ctgctgctgc ggccggccaa gcgcgccggt
     1441 ctgttccatg tcggcgccgt ctttcggcgt gaacgaactg agctgatacg agcatccgcc
     1501 gacggcaatc aagccgatca cggcagtgag ccgcagcagc gaacacaacg accgagaaga
     1561 ccggcaagat aggcgtgcgc gcccgcttcc actatataga gaccggcagg ccgcaccccg
     1621 atcgccccac gcgaccactt tgggcactcc acggaatgac cgacgcagcc tcgatagaac
     1681 accccacgga gttaacggcc ggtgacttca ccgcggccga tgagccgttg cgcctgttcg
     1741 cggcctggtt cgccgacgcc gaacgcgcgg agccggtcaa tccgaacgcc atgacgctgg
     1801 cgaccgtcga tcgcgacgga ctgcccaatg cgcgcatggt cctgttgaag ggcttcgacg
     1861 agcgcggctt cgtcttctac acgaacgtcg acagcgtgaa gggccgcgaa ttgagcgcaa
     1921 cgccgaaggc ggcgctgacg ttctattgga agacgctgca gcgccaggtc cggctgcgcg
     1981 gaagtgtcga gccggtcgcg gcggatgagg cggacagcta tttcgccacc cgctcgcgca
     2041 tggcgcagat cggcgcctgg gccagcaacc aatcggctcc gcttgaaagc cgcatggcgt
     2101 tcgagaaggc ggtcgcgcgc tataccgcga aattcgggat cggcgcggtg ccgcggccgc
     2161 cgcactggtc gggttaccgc atcgtcccgc aggagatcga gttctggcag gagcggccgt
     2221 tccggctgca cgaccgcatc gccttcagcc gttcgagccc gaccgcgccg tggcgcaagg
     2281 cgcgcctcta tccgtaagca ccacgacatc ggcgccagga gcaaagcaat ccgacgaacc
     2341 gatccgcaat tcgccagaca gttgaccgct ttgcttcacc ggcagtgacg gcacagagaa
     2401 gaatcgaaag acgagaagat gccaaccagc aaccagccgc ggcggacatt gcttctgacc
     2461 ggcgcgagcc gcggcatcgg acatgcgacc gtcaagcgct tctcggctgc ggggtggcgc
     2521 gtcctcacct cgtcgcggca tccgtttccg gaaaactgtc cgtgggaggc cggcccggag
     2581 gatcacatcc aggtcgacct cgcggacgcc gagaacaccg acgcggcgat cgccgaggtc
     2641 aagcggcggc tcaacggcga gctgcacgcg ctggtcaaca acgccgccat ctcgcccaag
     2701 gcggacggcg gcaagcggct cggctcgatc gacacctcgc gcgaggattg gcatcacgtg
     2761 ttccaggtga atttcttcgc gccgatcatg ctggcgcgcg ggctcctcga cgagctcaag
     2821 gccgccaagg gctccgtggt caatgtcacc tcgatcgccg gctcgcgcgt gcatcccttc
     2881 gccggcgctg cttacgcgac ctcgaaggcg gcgctcgccg cgctcacgcg cgagatggcc
     2941 gccgatttcg gcgcgctcgg cgtccgcgtc aacgccatcg ccccggggga gatcgacacg
     3001 gcgatgcttt cgcccggcac ggaaaagatc gttgagatca tcccgatgca ccgcctcggg
     3061 acaccggacg aggtcgcgaa gatcatctac gtgttgtgca ccgagacgtc ctcctacgtg
     3121 aacggtgccg aaatccacat caacggcggc cagcacgtgt gacggtcggc atggaacagg
     3181 atgtcaagga agtgaagatg tattcggact tcaaaagtcc gtacgcattc cttgccttcg
     3241 atccggcgct cgcgctcgag gacaagtacc gcatcaggct caaatggaag ccgttccagc
     3301 tgcggctcaa gggcaagggc gagcgcagcc ggtattccga atacaaggtg aagtactcct
     3361 acatggacgc gcggcgctgg gccaacatgc gcggcggact gatgatccgc ggcccgctga
     3421 agatcttcga caccacgccg gcgctgatcg gcggccttta tgcggataag aacggacggc
     3481 tgcgcgaata cggcaacagg gtcttcgaac tgttcttcaa gcgtgaactc gcggccgacg
     3541 aggccgacgc gatcgccgga gtgattgcgt cgatcggcct ctccgatgcc ggctatcggg
     3601 aatacctcgg cggtgaaggg gcagcggcct atgagcatgc ccaggaagag gcggtgaccg
     3661 agcaggtgtt cggcgtcccc atgttctatt tcgagaacga gccgttctgg ggatacgacc
     3721 gcatgggcct tctcgagcag cggctgaccg aagccggcct caagcgcgag gagccgcgcc
     3781 ggcgcgcggt gtgaaggaac gga
//
LOCUS       DATMQB010000330         4201 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2002906, whole genome shotgun sequence.
ACCESSION   DATMQB010000330 DATMQB010000000
VERSION     DATMQB010000330.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4201)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4201)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4201
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2002906"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            197..514
                     /gene="trxA"
                     /locus_tag="VNY79_09505"
     CDS             197..514
                     /gene="trxA"
                     /locus_tag="VNY79_09505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HWX72724.1"
                     /translation="MVDKVTDATFDQAVLKASGPVVVDFWAEWCGPCRMIGPALEEIS
                     NSLDGKVKILKLNVDENPATAAKYGVMSIPTLMLFKGGQLASRQVGAAPKQKLEQWIT
                     ASV"
     gene            complement(673..2265)
                     /gene="purH"
                     /locus_tag="VNY79_09510"
     CDS             complement(673..2265)
                     /gene="purH"
                     /locus_tag="VNY79_09510"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014438890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0003937 - IMP cyclohydrolase activity
                     [Evidence IEA];
                     GO_function: GO:0004643 -
                     phosphoribosylaminoimidazolecarboxamide formyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006164 - purine nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HWX72725.1"
                     /translation="MTEDLRRASRALISVSDKGGIVEFARALAGCGIELVSTGGTRET
                     LGKAGLAVIDIAELTGFPEMMDGRVKTLHPAVHGGLLAVRGNPAHAEALQTHRIRPID
                     MVVVNLYPFEDTAARGADFAACIENIDIGGPAMIRSAAKNHADVAVLVDADDYAAVLE
                     ELGRHGGRTSLALRKRLAAKAFARTAAYDAAIANWLAGELGERAPAYRTLGGRLIEAL
                     RYGENPHQWAAFYRTPDARFGVATARQAQGKQLSYNNINDTDAAYECVAEFDPARTAA
                     CAIIKHANPCGVAEGESLSDAYRKALACDPVSAYGGIVALNRTLDADAARAITEIFTE
                     VIIAPDATEEAAAIVAARKNLRLLIAGGLPDPRAAGLTAKTVAGGLLVQSRDNAVADD
                     MDLEPVTKRAPSNAELRDLRFAFRVAKHVKSNTIVYAKDLATVGIGAGQMSRVDAARI
                     AARKAADAAAAAGLKEPATKGSVVASDAFFPFADGLLVAIEAGATAVIQPGGSMRDDE
                     VIKAADDHGIAMVFTGTRHFRH"
     gene            complement(2409..4178)
                     /locus_tag="VNY79_09515"
     CDS             complement(2409..4178)
                     /locus_tag="VNY79_09515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heparinase II/III family protein"
                     /protein_id="HWX72726.1"
                     /translation="MSRVSVADHAKLSWLVLRGGLRRFAGWLSGHPVLRLSLIPLRTE
                     RLLIAPQELRTADGTRASEIYSGRFAFAGKVVVCDGRSVFEMEPPSEEWATALLGFGW
                     LRHLRAAESAITRANARALVDEWITLQGSWHPLAWRPDVLSRRVISWLSQSTLVLQDA
                     DVRFYRRFLRSLLRQVRYLRHTAGDASRGVARLQATVALTYAALCIASQSHRIKSATE
                     RLNHEIERQILPDGGHVGRNPDAVIELLLEFLPLRHAFKSRNIAPPQPLLNAIDRMIP
                     MLRFFRHSEGSFAHFNGMGMTPVDVLMTLLAYDDTRGTPLSNAPHSAYQRLEAAGGVV
                     IMDTGRAPPIEMSLEAHAGCLSFEFSTPQQSLIVVNCGMPPTAREDWRRHARETAAHS
                     TVTLNQTSSAGFVESAAFRRALGGAPMLGGPRHVSVARENRADSVVLRAAHDGYADAC
                     GIVHERTITLAADGTRLEGEDVFLSADGGEQVRTSRDHYAVRFHLHPSVKATLLTEDH
                     GVVLVAPNNEVWTFNAPEERVGLEDSVYLSGTDGPRRTVQMVIYGHASSVPRVVWSFQ
                     QTDPAAAEGVGRRVRGEQPKLTS"
BASE COUNT          690 a         1374 c         1456 g          681 t
ORIGIN      
        1 acccggaaaa aacgattcgc gcggcactcg tcttcaccgc tggtccgagc gttatggaga
       61 ttcccgatcc ggccatggac aaggcgttta ctgaggctat cggccgggtc acgctaaggt
      121 gaggctccct tgacggttgg aagggcggtc catagtttcg cgccctgcag attcttttcc
      181 ggataagagg tcttccatgg tcgacaaggt gactgacgca acgttcgatc aggccgtgct
      241 caaggcgagc gggcccgtcg tggtggactt ctgggccgag tggtgcggcc cctgccgtat
      301 gatcggcccc gccctcgagg agatttccaa ttcgctcgat ggcaaggtga agatcctcaa
      361 gctcaacgtc gacgagaatc ccgcgaccgc ggcgaaatac ggcgtcatgt cgatcccgac
      421 gctcatgctg ttcaagggcg gccagctcgc ctcccgccag gtcggtgccg cgccgaagca
      481 gaagctggag cagtggatca ccgcttcggt gtgattccaa cggcatttaa tgttgatcgt
      541 catcctgagg cgcccgcgcg tagcgcgggc ctcgaaggat gctaccggag cgcccaggcc
      601 gtcgcccttc gaggctcgct tcgctcgcac ctcagggtaa cgggcgtgag ccatgaaact
      661 gcgcagttgg cgtcaatgcc ggaagtgccg cgtgcccgta aacaccatgg cgatgccgtg
      721 atcgtcggcg gccttgatca cctcgtcgtc gcgcattgag ccgcccggct ggatcacggc
      781 agtagcgccg gcttcgatcg caacgagcaa gccgtcggcg aacgggaaga aggcatcgga
      841 cgcgaccacc gatcccttgg tcgcgggctc cttgaggccg gcggcggcgg ccgcatcggc
      901 ggccttgcgc gcagcaatgc gcgccgcgtc gacccggctc atctgtccgg cgccgatgcc
      961 gacggtcgcc aaatccttgg catagacgat cgtgttcgat ttcacgtgct tggcgacacg
     1021 gaaggcgaag cgcaggtcgc gcagctcggc attgctcggc gcgcgcttgg tcaccggctc
     1081 caagtccatg tcatcggcca cggcgttgtc gcgcgactgc accagcaggc cgccggcgac
     1141 ggtcttcgcc gtcagtccgg ccgcgcgcgg atcgggcagt ccgccggcga tcagcagccg
     1201 caggttcttc ctggcggcga cgatggcggc ggcttcctcg gtcgcatccg gcgcgatgat
     1261 cacttcggtg aagatttcgg tgatcgcgcg cgccgcgtcc gcatcgagcg ttcggttgag
     1321 cgcgacgatg ccgccatagg ccgagaccgg gtcgcaggcg agcgccttgc ggtaggcgtc
     1381 gctgaggctt tcgccctcgg cgacgccgca cggattggcg tgcttgatga tggcgcaggc
     1441 ggcagtgcgg gccggatcga actcggcgac gcattcgtag gcggcgtcgg tgtcgttgat
     1501 gttgttgtag gagagttgct tgccctgtgc ctgccgcgcc gtggcgacgc cgaagcgcgc
     1561 atcgggcgtg cgatagaagg ccgcccactg gtgcgggttt tcgccatagc gcaacgcttc
     1621 gatgagccgg ccgccgaggg tgcgataagc gggcgcccgc tcgccgagct cgccggccaa
     1681 ccagttggcg atcgccgcat cgtaggcggc cgtgcgggca aaggccttgg ccgcgagcct
     1741 tttgcgcaga gcgagcgagg tcctgccgcc atgccggccg agctcttcca gcaccgcggc
     1801 gtagtcgtcc gcgtcgacga gcacggcgac atcggcatgg ttcttggcgg ccgagcggat
     1861 catggccggc ccgccgatat cgatattctc gatgcacgcg gcaaaatccg cgccacgcgc
     1921 ggccgtgtcc tcgaacggat agaggttgac gaccaccata tcgatcggac gtatccggtg
     1981 cgtttgcagg gcttcagcgt gcgcgggatt gccgcgaacc gcgagcagcc cgccgtgcac
     2041 cgccggatgc agggtcttga cgcggccgtc catcatctcg gggaagccgg tcagctcggc
     2101 aatgtcgatg accgcgagcc ccgccttgcc cagcgtctcg cgcgtgccgc cggtggagac
     2161 gagttcgatg ccgcagcccg caagagcgcg ggcgaactcg acgatcccgc ccttgtcgga
     2221 aacggagatg agagcgcgcg aggcgcggcg cagatcttcg gtcatggcgg tccttgcacc
     2281 tgctctctca tttggtcatg ccggatcgcc gcaacgcgtg agtcctcaat ccagaaatac
     2341 caacagcgac aactgactcc agatctgccg tggccgcgtg ccggaacggc aagttgggcg
     2401 gcgacagctc acgacgtgag cttgggttgc tcgccgcgca cgcggcgccc caccccttcg
     2461 gccgcggcgg ggtcggtctg ctggaagctc cagaccacgc gcggcacgct gctggcgtgc
     2521 ccgtagatga ccatctgcac cgtgcggcgc gggccgtcgg ttccggagag atagacgctg
     2581 tcctcgagcc ccacacgctc ctcgggggcg ttgaaagtcc acacctcgtt gtttggcgca
     2641 acgagcacca cgccatggtc ttcggtgagc aaggtggcct tgaccgaggg gtggagatga
     2701 aagcgcaccg catagtgatc acggctggtg cgcacttgct cgccgccgtc ggcggacagg
     2761 aacacgtcct cgccttcgag ccgcgtgccg tcggccgcga gcgtgatcgt gcgctcgtgc
     2821 acgatgccgc aggcgtcggc atagccgtcg tgagccgccc gcagcacgac cgagtcggcg
     2881 cggttctcgc gcgccaccga aacgtggcgc gggccgccca gcatcggcgc gccgcccaat
     2941 gcccggcgga acgccgccga ttcgacgaag cccgccgacg atgtctggtt gagggtcacc
     3001 gtcgaatgcg ccgcggtctc gcgcgcgtgc cggcgccaat cctcgcgtgc ggtcggcggc
     3061 atgccgcagt tcaccacgat gaggctctgc tggggcgtcg agaattcaaa cgaaaggcag
     3121 ccggcatggg cttccaggct catctcgatc ggcggcgccc ggccggtatc catgatcacg
     3181 acgccgccgg cggcttcgag gcgctgataa gccgaatgcg gcgcgttcga cagcggcgtg
     3241 ccgcgggtat cgtcgtaggc gagcaacgtc atcagcacgt cgaccggcgt cattcccatg
     3301 ccattgaaat gcgcaaagct tccctccgaa tggcggaaga aacgcaacat cgggatcatg
     3361 cggtcgatgg cgttgagcag cggctgcggc ggcgcgatat tgcgcgactt gaacgcatgg
     3421 cgaagcggca ggaactcaag caacagctcg atgaccgcgt cgggattgcg gccgacatgg
     3481 ccgccgtcgg gcaggatctg ccgttcgatc tcgtggttga ggcgctccgt cgcagacttg
     3541 atgcggtggc tctggctggc gatgcagagc gccgcatagg tgagcgcgac cgtcgcctgc
     3601 aggcgtgcga cgccgcggct cgcgtcgccc gccgtgtgac gcagatagcg gacctggcgc
     3661 aggaggctgc ggaggaagcg ccgatagaaa cgcacgtcgg cgtcctgcag caccagcgtc
     3721 gactggctga gccaggagat gacgcgccgg gacagcacat cgggccgcca ggccagcggg
     3781 tgccaagagc cttgcaaggt gatccattcg tccaccagcg cgcgcgcatt ggcgcgcgtg
     3841 atggcggatt cggcggcacg caggtgacgc agccagccga agccgagaag cgccgtcgcc
     3901 cattcctcgg acggtggctc catctcgaac accgagcggc cgtcgcagac cacgaccttg
     3961 ccggcgaagg cgaagcggcc ggaatagatt tcgctcgcgc gcgtgccgtc ggcggtgcgc
     4021 agctcctgcg gcgcgatcag aagccgctcc gtccggagcg gtatgagcga caggcgcagc
     4081 accggatggc cgctgagcca accggcgaag cgccgcagcc cgccgcggag gacgagccag
     4141 gacagcttgg cgtggtcggc aactgaaacg cgcgacatcg acgcgctcgc ccctcagtta
     4201 g
//
LOCUS       DATMQB010000331         2792 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_761717, whole genome shotgun sequence.
ACCESSION   DATMQB010000331 DATMQB010000000
VERSION     DATMQB010000331.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2792)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2792)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2792
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_761717"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..553)
                     /locus_tag="VNY79_09520"
     CDS             complement(<1..553)
                     /locus_tag="VNY79_09520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HWX72727.1"
                     /translation="MPFWRDRDPLALASRSAARRALLEAAGIPLELQPADLDERALEA
                     GGAALAPGAVAQLLAREKAAAVARAKPGRLVLAADQVAALGTQRFSKPADRAAARAQL
                     RALSGRSHELHSAITFAQDAAVLFEHVEVARLTMRTFSERFLDLYLDAVGSAATASVG
                     AYQIEGLGIQLFERIDGDYFTILG"
     gene            complement(557..1393)
                     /locus_tag="VNY79_09525"
     CDS             complement(557..1393)
                     /locus_tag="VNY79_09525"
                     /EC_number="2.7.11.33"
                     /EC_number="2.7.4.28"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004674 - protein serine/threonine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016776 - phosphotransferase activity,
                     phosphate group as acceptor [Evidence IEA];
                     GO_process: GO:0006468 - protein phosphorylation [Evidence
                     IEA];
                     GO_process: GO:0006470 - protein dephosphorylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, water dikinase regulatory protein"
                     /protein_id="HWX72728.1"
                     /translation="MVHAAGYFHLHLISDATGETLITVARAAAAQYAKVTPVEHMHPL
                     VRTQKQLDRVLAEIEEQPGIVLYTLLQENLVARLEQKCRDLGVPYLSILGPVLHLFQA
                     YLGAESTHKVGAQHTLNAEYFRRIDALNYTMLHDDGQLTDDLEEADVLLVGVSRTSKT
                     PTSIYLANRGVKTANVPLVPGVQLSPGIERLKHPLIVGLYASPERVVQIRQNRLLSLK
                     AHRDDDKYIDREAVAEEIAASRRLCGRHNWPLIDVTRRSIEETAAAILALLGERRRHM
                     AS"
     gene            1744..2790
                     /gene="hemE"
                     /locus_tag="VNY79_09530"
     CDS             1744..2790
                     /gene="hemE"
                     /locus_tag="VNY79_09530"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004853 - uroporphyrinogen decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006779 - porphyrin-containing compound
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HWX72729.1"
                     /translation="MTERLATTPLLRVLTGKREPVPPIWLMRQAGRYLPEYRAIRQKA
                     GSFLDLCFNPKLAAELTLQPIRRFGFDVAILFSDILVVPHALGQSVRFTEGEGPRLDA
                     LADPSALRRLRPAIDHARLASVYEAIGRVKRDLPPAVALLGFCGAPWTVATYMIAGCG
                     TPDQGPARLFAYRHPEAFAMLIDLLVEASASYLVRQFEAGVDAAQIFDTWAGVLPAGE
                     FRKWCIEPCARIVAAVRKQIPGARIIGFPRGAGTELPRYLDAVAVDAIGLDWTVELGF
                     ARDQVQARRPVQGNLDPLALLTGGAPLDRSIDAILEALAGGPFIFNLGHGILPETPIA
                     HVERLIERVRKGAA"
BASE COUNT          480 a          868 c          943 g          501 t
ORIGIN      
        1 gaccgaggat ggtaaaatag tcgccgtcga tccgctcgaa cagctggatg ccgaggccct
       61 cgatctgata ggcgccgacg cttgcggtcg ccgcgctgcc gacggcgtcg agatagaggt
      121 cgaggaaccg ctccgaaaac gtccgcattg tcagccgcgc cacctcgaca tgctcgaaca
      181 gcaccgccgc atcctgggca aaggtgatcg ccgaatgaag ctcgtggctg cggccggaga
      241 gcgcgcgcaa ttgtgcccgg gccgcggctc gatcggccgg cttcgagaag cgttgggtgc
      301 cgagggctgc gacctgatcg gcagcaagaa cgagccggcc gggcttcgcg cgggccactg
      361 cggcggcttt ttcgcgcgca agaagttgcg cgaccgcgcc cggcgcaagc gccgcgccgc
      421 ctgcttcgag ggcccgctcg tcaaggtccg cgggttgcag ctcgagagga atgccggcgg
      481 cttcgagcaa ggcccggcgc gcagcgctcc gcgacgccag cgccagcgga tcgcggtcgc
      541 gccagaacgg catcggtcac gaggccatgt gccggcgccg ctcgccgagc aacgcgagaa
      601 tcgccgccgc ggtctcctcg atcgagcgcc gggtcacatc gatcagcggc caattgtgcc
      661 tgccacagag ccgccgcgag gcggcgattt cttcggccac ggcctcacgg tcgatgtatt
      721 tgtcgtcgtc gcggtgcgcc ttcaggctca ggagccggtt ctgacggatt tgcacgaccc
      781 gctcgggcga ggcgtacaaa ccgacgatca gcggatgctt gaggcgctcg atccccggcg
      841 acaactgcac gcccggcacc aagggcacat tggccgtctt gacaccgcgg ttggcgagat
      901 agatcgaggt cggcgtcttc gacgtgcgcg acacgccgac cagcaggaca tcggcttcct
      961 caaggtcgtc ggtgagctgc ccgtcatcgt gcagcatcgt gtagttgagg gcatcgatgc
     1021 ggcggaaata ttcggcgttg agggtgtgct gggcgccgac cttgtgcgtc gattcggcac
     1081 ccagataggc ctggaacaga tgcaggaccg gaccgaggat tgacaggtac ggcacaccga
     1141 ggtccctaca cttctgctcc agccgagcga ccaggttctc ctggagcaac gtatagagca
     1201 cgattcccgg ctgctcctcg atttcggcaa gcacgcggtc gagctgcttc tgggtgcgca
     1261 cgagcggatg catgtgctcg accggcgtga ccttcgcgta ctgcgccgcc gcagcgcgag
     1321 cgaccgtgat caatgtctcg ccggttgcat cggagatcag atggagatgg aaatagccgg
     1381 ccgcgtgcac catgaggagg attgaataac ctgccgatct ctggggacaa ggccatggct
     1441 tgcggcagag cgcaagaacc atgggtggga atgcggccag gtcgtccaca ttcgtgccgc
     1501 gccgctttca aacgcgaccg cggtcgcggc caccgttgaa atgtggatac tcgtcgtcat
     1561 cgatgaggaa aactcggtcg cagggccgac gcttgcttcg attcaccccg atcgccagcc
     1621 gaaggatggt agcgggcata tgtgggggac cggtggatgg aatgtgcgca ggaatgaatg
     1681 agtccaatca accgtccaac cactacaaca gattcttaga ttagatttta ttgaggaaga
     1741 agggtgacgg aaagactggc gacaaccccc ctgctccggg tcttgaccgg caagcgtgag
     1801 ccagttccac cgatctggct catgcggcag gcgggcagat accttccgga ataccgggct
     1861 atccgccaaa aggcaggaag cttcctcgat ctctgcttca atccgaagct tgcggcggag
     1921 ctgacgttgc agccgattcg ccggttcggc ttcgatgtgg ccatcctctt ttccgacatt
     1981 ctggtggtgc cgcatgcgct tgggcagtcg gtgcgcttta ccgagggcga aggtccgcgg
     2041 ctcgacgcgc ttgccgaccc ttcggcgctg aggaggttac ggccggcgat cgatcacgcg
     2101 aggctggcgt cggtttacga agcgatcggg cgggtcaagc gcgatttgcc gccggccgtc
     2161 gcgctgttgg gcttctgcgg cgctccttgg accgtcgcga cctatatgat cgctggttgc
     2221 ggcacgccgg accagggtcc ggcgcgattg tttgcctatc ggcatcccga agcgttcgcg
     2281 atgctcatcg atctgctggt ggaggcctcg gcgagctatc tggttcggca gtttgaggcc
     2341 ggcgtcgatg cggcgcagat tttcgacacc tgggcgggag ttctaccggc cggcgagttt
     2401 cgcaaatggt gcatcgagcc ctgtgcccgc attgttgctg cggtccgcaa gcagattccc
     2461 ggcgcacgaa tcatcggctt cccccgcggc gctgggaccg agctgccacg ctatctcgac
     2521 gcggtcgcag tcgatgcgat cgggctcgac tggacggtgg agctcggctt cgcgcgcgat
     2581 caggtccagg cgcgccggcc ggtccagggc aatctcgacc cgctggcgct tctcactgga
     2641 ggcgcaccgc tcgaccgctc gatcgatgcg atcctcgagg cattggcggg gggaccgttc
     2701 attttcaatc tcggccacgg catcctgccg gaaacgccga tcgcccatgt cgagcggctg
     2761 atcgagcgcg tgcgcaaggg cgcggcctag gc
//
LOCUS       DATMQB010000332         3795 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2306619, whole genome shotgun sequence.
ACCESSION   DATMQB010000332 DATMQB010000000
VERSION     DATMQB010000332.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3795)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3795)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3795
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2306619"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1280)
                     /gene="carB"
                     /locus_tag="VNY79_09535"
     CDS             complement(<1..1280)
                     /gene="carB"
                     /locus_tag="VNY79_09535"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HWX72730.1"
                     /translation="MPRRTDISSILIIGAGPIVIGQACEFDYSGTQACKALKDEGYRV
                     VLVNSNPATIMTDPDLADATYIEPITPEIVAKIIEKERPDALLPTMGGQTALNTALSL
                     RRMGVLERCGVTMIGATADAIDKAEDRERFREAMTRIGLETPRSHQVKTLIAALEALE
                     DIGLPAIIRPSFTLGGTGGGIAYNKAEFIEIAERGIDASPTSEVLIEESVLGWKEFEM
                     EVVRDKNDNCIIVCSIENLDPMGVHTGDSITVAPALTLTDKEYQRMRDASIAVLREIG
                     VETGGSNVQFAVNPADGRLVVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDE
                     IANDITGGATPASFEPTIDYIVTKIPRFAFEKFPGAEPVLTTSMKSVGEAMAIGRTFQ
                     ESLQKALRSLETGLTGLDEVAIPGLGQGDDKNAIR"
     gene            1390..1722
                     /locus_tag="VNY79_09540"
     CDS             1390..1722
                     /locus_tag="VNY79_09540"
                     /inference="COORDINATES: protein motif:HMM:NF016370.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF559 domain-containing protein"
                     /protein_id="HWX72731.1"
                     /translation="MSKTARALRRRSTEAEKLLWSRLRGRRLEGIKFKRQVPIANYIV
                     DFVALDLKFIVEVDGGQHQIRAAADAERTRILQEWGYHVVRLWNNDVLGNIDGVLEAI
                     LQELQLVR"
     gene            2006..3091
                     /locus_tag="VNY79_09545"
     CDS             2006..3091
                     /locus_tag="VNY79_09545"
                     /inference="COORDINATES: protein motif:HMM:TIGR00765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HWX72732.1"
                     /translation="MTARQSELRRDSATSTAGAGWSERKPPFGEPRSAEEPHELERLR
                     TKEHERGRHAAHPLQIPWLGWKDILWRTYREMQTDRLFSIAAGVAFYVLLAIFPAITA
                     LVSAYGLFFNATTITDNFSLLDDILPGNVLDLMREQAGRIAANGGGALGIGVIVGILV
                     ALWSTMSGVKAVIDALNVTYEEQESRSLIKLNLVALALTLAGFAAFLLVVGAVVVLPL
                     VLSFVGLGGVTATLAWMVRWPALFVLLLVGLSVLYRYAPDRKRARWQWVSVGSVFATV
                     AWIAASFVFSWFLAHFANYNATYGSLGAAVGLMMWLWISATVVLLGAELNAEIEHQTA
                     RDSTVGGERPLGARGAVMADTVGAKQT"
     gene            3472..>3795
                     /locus_tag="VNY79_09550"
     CDS             3472..>3795
                     /locus_tag="VNY79_09550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018640914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72733.1"
                     /translation="MVFVIALLSCLIVSGPNAAVSIAGAATAAPRAAAKDARKTVSLP
                     HVYLMRGLMNVFSLGMDQLAVIIARHGIEASVHNHAEADAVVSEIAARYSAGDRGPII
                     LIGHSL"
BASE COUNT          639 a         1205 c         1250 g          701 t
ORIGIN      
        1 cggatggcgt tcttgtcgtc gccctggccg agcccgggga tcgccacctc gtcgagcccg
       61 gtgagcccgg tctcgagcga gcgcagcgcc ttctgcaggc tttcctggaa ggtgcggccg
      121 atcgccatcg cctcgccgac cgacttcatc gacgtggtga gcaccggctc ggcgccggga
      181 aatttctcga aggcgaagcg cgggatcttg gtgacgatat agtcgatcgt cggctcgaac
      241 gaagccggcg tggcgccgcc ggtaatgtcg ttggcgatct cgtcgagcgt gtagccgacg
      301 gcgagcttgg ccgcgacctt ggcgatggga aagccggtcg ccttcgaggc gagcgccgag
      361 gagcgcgaga ctcgcggatt catttcgatg acgacgaggc ggccgtccgc cggattgacc
      421 gcgaactgca cgttggagcc gccggtctcg acgccgatct cgcgcagcac cgcgatcgag
      481 gcgtcgcgca tgcgctggta ttccttgtcg gtgagcgtga gcgccggcgc caccgtgatc
      541 gagtcgccgg tgtgcacacc catcggatcg aggttctcga tcgagcagac gatgatgcaa
      601 ttgtcgttct tgtcgcgcac cacctccatc tcgaactctt tccagccgag caccgattcc
      661 tcgatcagca cctccgaggt cggcgaggcg tcgatgccgc gctcggcgat ctcgatgaac
      721 tccgccttgt tgtaggcgat gccgccgccg gtgccgccga gcgtaaacga gggccggatg
      781 atggcgggaa gcccgatatc ctcgagcgct tcgagcgcag caatgagggt cttgacctgg
      841 tgcgagcgcg gcgtctcgag cccgatcctg gtcattgcct cgcggaaccg ctcacgatcc
      901 tcggccttgt cgatggcgtc ggcggtcgcg ccgatcatgg tgacgccgca tctttccaga
      961 acgcccatgc gccgcagcga cagcgcggtg ttaagcgcgg tctgcccgcc catggtcggc
     1021 aagagcgcgt ccggacgctc cttctcgatg atcttggcca cgatctccgg cgtgatcggc
     1081 tcgatgtagg tcgcgtcggc cagatccgga tcggtcatga tggtcgccgg attggaattg
     1141 acgagaacga cccgatagcc ctcgtccttg agcgccttgc aggcctgcgt gccggaatag
     1201 tcgaactcgc aggcctggcc gatgacgatc ggccccgcac cgatgatcag gatcgaggag
     1261 atgtcagtcc gcctgggcat ttgatcaggg atatcctgta gtttcgcagc cggaacgctg
     1321 actttgagcc gcgcacggcc gaaaaccctc tccccggcgg ggagagggta gggtgagggg
     1381 gcccggccca tgagtaaaac cgcccgtgcg ctgcgccggc gatcgaccga agccgaaaaa
     1441 ctgctgtggt ccaggttgcg cgggcgccgg cttgaaggaa tcaaattcaa acgacaagtg
     1501 ccgatcgcga actatatcgt cgattttgtc gcgctcgatt tgaaattcat cgtcgaagtg
     1561 gacggtggcc agcaccagat ccgtgctgcc gcggacgccg aacggacacg cattttgcag
     1621 gaatgggggt accacgtcgt tcgcctctgg aacaacgacg ttctcggcaa catcgacggc
     1681 gttctcgaag cgattctgca agagcttcaa ctcgtccgct gagccccctc accccgccct
     1741 ctccccggcg gggagaggga gacgattggg cacaaaaaaa gggcgcgcct cttgcgcgtc
     1801 cttgggcccg gatggccggc gccggggctc ggccccgcgc gagcggtgtt tagaccagaa
     1861 ccggcagcca gggaaggggt ctgctcacga ttgccgcgac agcatgcggt cgtcggccga
     1921 gccggctcgg ccggacgcga acaaggctgg cggcaaccat atgaccgcgc tctcgttatc
     1981 tcgtggtgca tcgaggaccg atccgatgac ggcgcgacag tcggaactgc ggcgcgacag
     2041 cgccacgagc acggccgggg ccgggtggag cgagagaaaa ccgccgttcg gcgagccgcg
     2101 tagcgccgag gagccgcacg aactcgaacg gctgcgcacg aaagagcatg agcgcgggcg
     2161 ccatgccgcc cacccgctgc agattccctg gctcggctgg aaggacatcc tctggcgcac
     2221 ctaccgggaa atgcagacgg accggctgtt ctcgatcgcc gccggcgtcg ccttctacgt
     2281 cctgcttgcg atctttcccg cgatcaccgc cctggtctcg gcctatggct tgttcttcaa
     2341 cgccacgaca atcaccgaca atttctccct gctggacgac atcctccccg gcaacgtgct
     2401 cgacctcatg cgcgagcagg ctggccgcat cgccgcgaac ggcggcggcg cgctcggcat
     2461 cggcgtcatc gtcggtatcc tggtggcgct gtggagcacc atgagcggcg tgaaggccgt
     2521 gatcgacgcg ctcaacgtca cctatgagga gcaggagagc cgcagcctca tcaagctcaa
     2581 cctggtggcg ctcgccctca cgctggccgg cttcgccgcg ttcctgctcg tcgtcggcgc
     2641 cgtcgtcgtg ctgcctttgg tcctgtcatt cgtcgggctg ggcggggtga cggcgacgct
     2701 cgcctggatg gtgcgctggc cggcgctgtt cgtgctgctc ctggtcgggc tgtcggtcct
     2761 ctaccgctac gccccggatc gcaagcgcgc gcgctggcaa tgggtaagtg tcggcagcgt
     2821 cttcgccacg gtggcatgga tcgccgcctc gttcgtgttc tcctggttcc tcgcccactt
     2881 cgccaactac aacgccacct acggctcgct cggcgccgcg gtcggcctga tgatgtggct
     2941 atggatttcc gcgaccgtgg tgctgctcgg cgccgagctc aacgccgaga tcgagcacca
     3001 gacggcgcgc gattcgacgg tcggcgggga gaggccgctc ggcgcgcgcg gcgccgtgat
     3061 ggccgatacc gtcggggcga agcaaacctg atgttcgcga acggcggacc gtggcacgcc
     3121 tatccttgtg gtgtccgctg ctggcaaatt cggacattcc gattgagcca catcggtagc
     3181 gaatgaccca tctcgacaaa atccgccgcc ttcgagctgt ctcaagatcg gtgccgttgt
     3241 gctactctgg caggctgttc tggcggtggg ggggtagcaa tgaagcggcg ctccaacgca
     3301 agggaggtcg tccagctaag ggaggagtta cgcgaggcgc gggagcatca gaccgctgca
     3361 tcgaatgtgc ttcacggcac acacacggag ctatacgagg gggagtcgga tatgcacgcg
     3421 tatctcgcat gtcactctag cagcagccat agacttccac gcactctcca gatggtcttt
     3481 gtaattgcgc tactaagttg cttgattgtg agtggtccca atgccgccgt cagcattgcc
     3541 ggtgctgcca ccgccgcgcc gagggctgcg gcgaaggatg ctcgcaagac ggtgagcctc
     3601 ccccatgttt acttgatgcg tggcttgatg aacgtttttt cgctcggcat ggatcagttg
     3661 gcggtaataa tcgcccggca tggcatcgaa gcgagcgttc acaatcacgc cgaagcggac
     3721 gcagtcgtaa gcgaaattgc cgcgcgctat agtgcgggcg accgcggacc gattatcctc
     3781 attgggcatt cgctc
//
LOCUS       DATMQB010000333         4211 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2618673, whole genome shotgun sequence.
ACCESSION   DATMQB010000333 DATMQB010000000
VERSION     DATMQB010000333.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4211)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4211)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4211
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2618673"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1950)
                     /locus_tag="VNY79_09555"
     CDS             complement(<1..1950)
                     /locus_tag="VNY79_09555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003682 - chromatin binding [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0007076 - mitotic chromosome condensation
                     [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation SMC family protein"
                     /protein_id="HWX72734.1"
                     /translation="MKLTRLRLIGFKSFVEPTDFAIEPGLTGVVGPNGCGKSNLVEAV
                     RWVMGEASYKAMRAAEMDDVIFSGNTDRPSRNHAEVSVLVDNDDRKAPATFNDSETLE
                     VSRRIMREQGSVFRVNGREVRARDVAMLFADASTGSRSPALVHQGRVGEIIQARPDQR
                     RRVLEEAAGISGLHARRHEAELRLKAAEHNLARVEDVIGQLAAQVASLKTQARQAVRY
                     RNISHQVRRIEALLLHLRWVAARTELGDAERTSDEAVRVVAARTGEQAQASTRQAGLA
                     AGLPALREAEAKAAAALQRLLMAREALEREEARAKERIGELDRRLEQFAADLARERTL
                     AADADTALNALATEEETLKSEAQTRAAQLGGVNERVAVADAALAASEKSFAALTGEFA
                     DLTARRNQLQSALRDHEQRLEKLATELANIETGLAASGTGEPDLAALIEALQVAQAAL
                     AEAESNAQAAEVAHGGARERLEAARAPLAAAERRVQRLETEAKTIGKLLAVENKKLWP
                     PVMDALVVEKGYEKALGAALGDDLDAPVDHASAPMRWAGAALDPADPQLPDGATSLAH
                     YVQAPPELARRLNQIGVVERADAARLAATLKPGQRLVSREGDFWRWDGFAVAAHAPTG
                     AARRLAERGRLQTIATELETARGEVE"
     gene            complement(2178..2834)
                     /locus_tag="VNY79_09560"
     CDS             complement(2178..2834)
                     /locus_tag="VNY79_09560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015036 - disulfide oxidoreductase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HWX72735.1"
                     /translation="MTPTRRQFVTATAIFAFAGVAVPRFASPARAEDTAGPDPAELAK
                     PGPDGDVVLGSEKAPVTIIEYASMTCPHCAHFSTTTFPQLEKRYIDTGKVRFIFREFP
                     LDPLAAAGFMLARCAGKNRFMPVVEALFAKQQDWMVQKPIPPLMAIAKQFGFTEQSFD
                     QCLANQQVLESIQAVRDRAAEKLGVNSTPTFFVNGKKLTGDQSIEAMAKEIEPYLKEG
                     "
     gene            complement(2954..3484)
                     /locus_tag="VNY79_09565"
     CDS             complement(2954..3484)
                     /locus_tag="VNY79_09565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DciA family protein"
                     /protein_id="HWX72736.1"
                     /translation="MNKPSRSFAKPLRDLLGKVVGETFTRQGFASAELVTRWTEIVGA
                     EISAHSEPIKVQWPRGPADSFPARGSGTGTVRGSAAGWERPPGVLVLRVEGPAAIEIQ
                     HLAGVICERVNRFLGWRAVERVALRQAPLRRPSRTPAKRADAAAAARIAEGLSDVVDD
                     DLKQALARLGAAVRRS"
     gene            3512..>4211
                     /locus_tag="VNY79_09570"
     CDS             3512..>4211
                     /locus_tag="VNY79_09570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013169179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HWX72737.1"
                     /translation="MRPDEARSASRVAANAAARQHAQGGTAISYPQPTALLAWYGRHR
                     RTLPWRAVPPERPDPYRVWLSEIMLQQTTVKTVVPYYRRFLARWGDVGALASAPLEEV
                     LKTWAGLGYYARARNLHACARAVVEQHGEKFPASEAALRALPGIGDYTAAAIAAIAFD
                     APAAPVDGNVERVIARLFAVAEPLPRAKQELRRHARELIPERRAGDFAQAMMDLGATI
                     CTPKKPACFLCPWND"
BASE COUNT          640 a         1414 c         1464 g          693 t
ORIGIN      
        1 ctcgacttcg ccgcgcgcgg tttccagctc ggtcgcgatc gtctgcagcc ggccacgctc
       61 ggcgagccgg cgggccgccc cggtcggcgc atgggcggca acggcaaacc cgtcccaccg
      121 ccagaaatcg ccttcgcgcg agaccagccg ctggccgggc ttgagcgtag ccgccaagcg
      181 ggctgcgtcg gcgcgctcga ccacgccgat ctgattgaga cggcgcgcaa gttccggcgg
      241 ggcctgcaca tagtgggcga gggaggtcgc accgtccggc agttgcggat cggctggatc
      301 aagcgccgcg cccgcccagc gcatcggcgc cgaggcgtga tcgaccggag cgtcgagatc
      361 gtcgccgagt gctgcaccca gcgccttctc gtagcccttc tcgacgacaa gcgcgtccat
      421 caccggcggc cacagtttct tgttttcgac cgcgaggagt ttgccgatgg tcttggcctc
      481 ggtttccagg cgttgcacgc ggcgctcggc ggccgcgagc ggtgcacggg ccgcttcaag
      541 ccgctcgcgc gcgccgccat gggcgacttc tgccgcctgc gcgttgctct cggcttcggc
      601 aagcgcggcc tgcgccacct gtagcgcctc aatcagcgcc gcgaggtcgg gctctccggt
      661 gccgctagcg gcgaggccgg tttcgatgtt cgccaactcg gtcgcgagct tttccagccg
      721 ctgctcatga tcccgcagcg ccgactgcaa ctggttgcgt cgcgcggtga gatcggcgaa
      781 ctcgccggta agcgcggcaa acgatttctc cgaggcggcg agcgcagcat cggcaacggc
      841 gacgcgctcg ttgaccccgc caagctgtgc ggcgcgggtc tgcgcttcgg acttgagcgt
      901 ctcttcctcg gtggcgagcg cgttgagcgc ggtgtcggca tcggcggcga gcgtgcgctc
      961 gcgcgcaaga tcggccgcga attgctcgag ccggcggtcg agttcgccga tgcgctcctt
     1021 ggcgcgcgct tcctcccgct cgagcgcttc gcgcgccatg agcagacgct gcagcgccgc
     1081 cgcagccttg gcttccgcct cgcgcagggc agggagcccg gcggcgaggc cggcttggcg
     1141 cgtggatgcc tgcgcctgct cgccggtccg cgcggcgacg acgcgaacag cctcgtcact
     1201 ggtgcgctcg gcatcgccga gttcagtgcg ggcggcgacc cagcgcagat gcagcagcag
     1261 cgcttcgatg cgccggacct ggtgcgagat attgcgatag cgcaccgcct gccgcgcctg
     1321 cgtcttgagc gaggcgacct gcgcggcaag ctggccgatg acgtcttcga cgcgggcgag
     1381 attgtgctcc gcggccttga gccgcagttc cgcctcgtga cggcgcgcat gcaggccgga
     1441 aatgcccgcc gcttcttcga gcacgcgccg gcgctgatcc ggccgcgcct ggatgatctc
     1501 gccgacgcgg ccctgatgca cgagcgccgg cgagcgcgag cccgtcgagg cgtcggcaaa
     1561 cagcatggcg acgtcgcggg ccctgacctc gcggccgttg acacggaaaa ccgagccttg
     1621 ctcgcgcatg atgcggcgcg agacctcgag cgtttcagag tcgttgaacg tcgccggcgc
     1681 cttgcggtcg tcgttgtcga cgaggacgga gacttccgcg tggttgcgcg agggacggtc
     1741 ggtgttgccg gagaagataa cgtcgtccat ctcggccgcg cgcatggcct tgtaggaggc
     1801 ttcgcccatg acccagcgca ccgcttcgac gaggttcgac ttgccgcagc cgttggggcc
     1861 gacgaccccg gtcaggcccg gttcgatcgc aaagtcggtc ggttcgacga aggatttgaa
     1921 gccgatcagg cgcagccgcg tgagcttcat tcgcgtcttg tgtccatctc ccttgcggcg
     1981 gcggtcaagg gaatcgctag gggctcacgc ccatcggcgt gttcgaaaga gggggtgccg
     2041 catcggcgcg gagaatgaat cgtcgccgct agaagcgcaa cagcggcgcg acgttatcca
     2101 gattttcgca tcatcggccg cgcgccggca gcgcttatcg gccgcgtccg gtgcagacgg
     2161 acaagggaga aaaaccctta tccttccttg agatagggct cgatttcctt ggccatggcc
     2221 tcgatcgact gatcgccggt gagcttcttg ccattgacga agaaagtcgg tgtcgaattg
     2281 accccgagct tctcggcggc gcggtcacgc accgcctgga tgctttcgag cacctgctga
     2341 ttcgccaggc attggtcgaa cgactgttcg gtaaagccga attgcttggc gatcgccatg
     2401 agcggtggga tcggcttctg caccatccag tcctgctgct tggcaaacag ggcctccacg
     2461 accggcatga atctgttctt gccggcgcag cgcgccagca tgaagccggc cgccgcgagc
     2521 ggatcgagcg ggaattcccg gaagatgaag cgcaccttgc cggtatcgat gtagcgcttc
     2581 tccaactgcg gaaaggtcgt ggtcgagaaa tgcgcgcagt gcgggcaggt catcgaggca
     2641 tattcgatga tggtgaccgg cgccttctcg gagccgagca cgacatcgcc gtcaggaccg
     2701 ggtttcgcca gttccgccgg gtcgggaccg gccgtatcct ctgcacgagc cggggaggcg
     2761 aaacggggca cagcaacgcc ggcgaacgca aatatcgcgg tggccgtgac gaattggcgg
     2821 cgagtcggcg tcaagggaat ctcctggttc aaaggggaaa tcctgcagag caaatgtggc
     2881 accggcacgc cgatccgcca aggggccgcc gctgcttccg actttcccaa tgccctcaac
     2941 agcgcgcgga ctgtcagctc cgtcgcacgg ccgcgccgag ccgcgccagc gcttgcttga
     3001 ggtcgtcgtc gacgacgtcg gacagacctt cggcaatgcg cgctgccgcg gcagcgtcgg
     3061 cgcgcttggc tggtgttcgc gaggggcgac gcagcggggc ttggcgcagc gcgacgcgtt
     3121 cgacggcgcg ccagccgagg aagcggttga cgcgctcgca gatgacgccg gcgaggtgct
     3181 ggatttcgat tgccgccggg ccctcgacgc gcagcacaag aacaccgggc ggccgttccc
     3241 acccagcggc cgatccgcga acggtacctg tgcccgatcc gcgagcgggg aaagaatccg
     3301 ctgggccccg cggccattgg acctttatcg gctcgctgtg agcggaaatt tcggcgccga
     3361 cgatctccgt ccagcgcgtg accagttcgg ccgaagcaaa gccctggcgc gtgaatgttt
     3421 cgcccacgac cttgccgagg agatcgcgca acggcttggc gaatgagcgg gaaggcttgt
     3481 tcatggcgcg gtgctctgcc atccctcgat catgcgtccc gatgaggcga ggtcggcgtc
     3541 gagggtagca gcgaacgccg cggcgagaca gcatgcgcag ggcgggacgg ctatttcata
     3601 cccgcaaccc accgcgctgc tcgcctggta cggccgccac cgcaggacgc tgccgtggcg
     3661 cgcggtgccg cccgagcgcc ccgacccgta ccgtgtctgg ctttccgaaa tcatgttgca
     3721 gcagacgacg gtcaagaccg tcgtcccgta ttaccggcgc ttcctggcgc gctggggcga
     3781 cgtcggcgcg ctcgcgtcag cgccgctcga agaggtgctc aagacgtggg cggggctcgg
     3841 ctattacgcc cgggcgcgca acctgcatgc gtgcgcgcgc gccgtggtcg agcagcacgg
     3901 cgaaaaattt cccgcgagcg aggcggcgtt gcgcgcgctt cccggcatcg gcgactacac
     3961 cgccgccgcc attgccgcga ttgcattcga tgcgccggcg gccccggtgg acggcaacgt
     4021 cgagcgcgtg atcgcgcggc ttttcgccgt tgcggagccg cttccccggg ccaagcagga
     4081 gctgcgccgc catgcgcgcg agctgatacc ggagcgccgc gccggcgact ttgcgcaggc
     4141 catgatggac ctcggggcga ccatctgcac gccgaagaag ccggcctgct tcctgtgccc
     4201 ctggaacgac a
//
LOCUS       DATMQB010000334         5115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3858343, whole genome shotgun sequence.
ACCESSION   DATMQB010000334 DATMQB010000000
VERSION     DATMQB010000334.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5115
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3858343"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            494..1816
                     /locus_tag="VNY79_09575"
     CDS             494..1816
                     /locus_tag="VNY79_09575"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013434.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0071949 - FAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HWX72738.1"
                     /translation="MSATDLTAYGRSWYAATMVETPERPQLAKDLDVDVCVIGGGLAG
                     LTATRELARNGWSVALIEAGRLAARASGRNTGFVLPGFAAEPDRVVARVGFEQAKDLW
                     ALAQAGLDYVRNAVVEDAMPGVDPQDGWLYVSKTDNGDEFIRLVGLLGELGCEIEGWP
                     TERVRAVLHSERYFHAIHYLRAFHIHPLNYALGLALAAERDGARIFEHTPALSVDPAG
                     VRKRIVTPAARLRADHVVLCGNLQIGRLMPRVAAALVPVTTYVITTPPLGSRLAEAIE
                     FRGAVSDTDLADNHYRVIDGDRLMWSGRATTWARNPNRYVHALTADIKKTYPQLGEVM
                     SAYSWSGTLGNTIHRMPQIGELGHHVWLASGFGGHGLNTTAMAGNLIARAIVENDQTW
                     RQFTPFELVWAGGILGRAAVQAYYWIKRVRDALAERRAQAVAPAARSG"
     gene            complement(1844..2689)
                     /locus_tag="VNY79_09580"
     CDS             complement(1844..2689)
                     /locus_tag="VNY79_09580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HWX72739.1"
                     /translation="MRFEGTSAYVATDDLKVAVNAAIALERPLLVKGEPGTGKTVLAI
                     EIAKALGAPLIEWHIKSTTKALQGLYEYDAVTRLRDSQLGDARVKDIRNYIKRGKLWE
                     AFTADERPVLLIDEVDKADIEFPNDLLQELDRMEFFVYETGETVHARRRPIVVITSNN
                     EKELPDAFLRRCFFHYIRFPDPDTMRAIVEVHFPGVKQRLVAEALRLFYEIRDVPGMK
                     KKPSTSELLDWLKLLMVEDISPETLRERDPKKLIPPLHGALIKNEQDVHLFERLAFMA
                     RRDGR"
     gene            2945..3223
                     /locus_tag="VNY79_09585"
     CDS             2945..3223
                     /locus_tag="VNY79_09585"
                     /inference="COORDINATES: protein motif:HMM:NF022227.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0044781 - bacterial-type flagellum
                     organization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliX"
                     /protein_id="HWX72740.1"
                     /translation="MGSLSLRTPRPSGAPRRRRFAPSETDAPQATSPTIALRTRAGIN
                     ALIALQGVEDPGERRRRAIERGRRALDALDELKLACSAAASTRQCGCG"
     gene            3181..3336
                     /locus_tag="VNY79_09590"
     CDS             3181..3336
                     /locus_tag="VNY79_09590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+.
                     GO_process: GO:0044781 - bacterial-type flagellum
                     organization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliX"
                     /protein_id="HWX72741.1"
                     /translation="MLGGCLDQAMRLRLKSVAADLRDGSGDEKLDQVLGEIDLRVALE
                     LAKAGVV"
     gene            3612..3977
                     /gene="dksA"
                     /locus_tag="VNY79_09595"
     CDS             3612..3977
                     /gene="dksA"
                     /locus_tag="VNY79_09595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019899 - enzyme binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase-binding protein DksA"
                     /protein_id="HWX72742.1"
                     /translation="MNERQREYFRMKLLDWREDILKEAKETLQHLQDDNQNHPDLADR
                     ASSETDRAIELRARDRQRKLIAKIDAALARIEDGTYGYCEETGEPISLKRLEARPIAT
                     LSVEAQERHERRERVYREE"
     gene            4135..>5115
                     /locus_tag="VNY79_09600"
     CDS             4135..>5115
                     /locus_tag="VNY79_09600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HWX72743.1"
                     /translation="MNEQIKTVAGAPLFNPLAPEFIANPYPYYQRLRETDPMHLTPLG
                     FYVASRHADIATVLRDKRFGKDFAGRMSRRHGPEILEEPVYRSMRHWMLQQDPPDHTR
                     LRGLVVRAFTARRVEDMRPRIQEIVDGIIDRVEARGRMDLIADFAFRLPVTVICDMLG
                     IPAEDRELFFTSSRTGGRLLDPVPLSRAEIEQHNASNLAAAEYFHRLFELRRRQPGED
                     LTTQLVQAEERGSKLSNEELTANVILLFGAGHETTVNLIGNDLLALHRNPDQLKLLRE
                     DPSLTAGAVEELLRYDSSVQVTGRTTLEDVDEIGGIALAKGQSVICLLGSA"
BASE COUNT          842 a         1702 c         1701 g          870 t
ORIGIN      
        1 tctcggctcg ggcggcagcg agatcgcggc cggcggcggc aatcttgtcc tgcgtttcgc
       61 gggcgagctt gttcagtgcc tgttgcagaa actcgacgtt cgcctgcagg cagccggtac
      121 gacgctccat cttcgtttcg gcggtgcata cttccatgcc gcgaatgtcc tgtgcggctg
      181 cgggcgaaag ccatgtcgct agcagcactc ccgcggggag caaaaatggc gctcctcgcc
      241 gccggggcgc ctgccgttgc ggctgctcgc gtatcatggc ttcgcgtgtc atcccctgga
      301 gcttacatga tcgggaggag gcgatgtaac gctctcgcga ggtccgatcc cgcatcccgc
      361 tttgccggcg ccgataagcg tgcgcggagt gcccgcaacc ctgcggtcgt cgccgctgtc
      421 aaaggcggga aacaggcgtt agagtcgatg accggcatgt gcgaatggag agctgcagcg
      481 gcatgaaacc ggaatgagtg ctaccgatct cacggcctat ggccgaagtt ggtacgccgc
      541 gaccatggtg gaaacgccgg agcggccgca gcttgcgaaa gacctcgatg tcgacgtctg
      601 cgtcatcggc ggcgggctcg ccggcctcac cgccacgcgc gagctcgccc gcaacggctg
      661 gtcggtcgcg ctcatcgagg cgggccgcct cgcggcacgc gcctcgggcc gcaacaccgg
      721 gttcgtgctt cccggctttg ccgccgagcc cgaccgggtt gtcgcccgcg tcggcttcga
      781 gcaggccaag gatctgtggg cgctggcgca ggccggcctc gactacgtgc gcaatgccgt
      841 cgtcgaggat gccatgccgg gcgtcgaccc gcaggacggc tggctctacg tttccaagac
      901 cgacaacggc gacgagttca tccgcctggt cgggctgctc ggcgaactcg gctgcgaaat
      961 cgagggctgg ccgaccgagc gggtgcgcgc cgtgctgcac agcgagcgct acttccacgc
     1021 gatccactat ctgcgcgcgt tccacatcca tccgctcaac tatgcgctcg ggctggcgct
     1081 ggcggccgag cgcgacggcg cgcgcatctt cgagcacact ccggcgctgt ccgtcgatcc
     1141 cgcgggcgtg cgcaaacgca tcgtcacgcc ggcggcgcgg ctgcgcgccg atcatgtggt
     1201 gctgtgcggc aatctgcaga tcggcagact catgccgcgg gttgcggcgg cgctcgttcc
     1261 ggtgacgacc tacgtaatca ccacccctcc gctcgggtcg cgccttgccg aggcgatcga
     1321 attccgcggc gcggtgagcg acaccgatct ggccgacaat cactaccggg ttatcgatgg
     1381 cgaccggctg atgtggtcgg gacgggcgac gacctgggcg cgcaatccca accgctacgt
     1441 gcatgcgctg accgcggaca tcaagaagac ctatccgcag ctcggcgagg tcatgtccgc
     1501 ctattcctgg tccggcacgc tcggcaatac gatccaccgt atgccgcaga tcggcgagct
     1561 cggccatcac gtatggctgg cgagcggttt cggcggccat gggctcaaca ccaccgccat
     1621 ggccggcaat ctcatcgcgc gagctatcgt cgagaacgat cagacctggc ggcaattcac
     1681 gccgttcgag cttgtgtggg cgggcgggat tctgggccgc gccgcggtgc aggcttacta
     1741 ttggatcaag cgggtgcgcg acgccctcgc cgagcgccgc gcccaggcgg tcgcgcccgc
     1801 cgcccgcagc gggtgagccg ggcgcgctgg cgggctgcgt gcttcagcgg ccgtcgcgtc
     1861 gcgccatgaa cgccagccgt tcgaacaggt gcacgtcctg ctcgttcttg atcagcgcgc
     1921 catgcagcgg cggaataagc ttcttcgggt cgcgctcgcg tagcgtctcc ggcgagatgt
     1981 cctcgaccat gagcagcttg agccagtcga gcagctcgga ggtcgatggc ttcttcttca
     2041 tgccgggcac gtcgcggatc tcgtagaaca gccgcagcgc ctcggcgacc agccgctgct
     2101 tgacgccggg aaaatgcacc tcgacgatcg cacgcatcgt gtccggatcg ggaaagcgga
     2161 tgtaatggaa gaagcagcgg cgcagaaacg cgtcgggcaa ttccttctcg ttgttggacg
     2221 tgatgaccac gatcggccgg cggcgggcat gcaccgtttc cccggtctcg tagacgaaga
     2281 actccatgcg atcgagttcc tgcagcaggt cgttgggaaa ctcgatgtcc gccttgtcga
     2341 cctcgtcgat gagcagcacc ggccgctcgt ccgcggtgaa ggcctcccac agcttgccgc
     2401 gtttgatgta gttgcggatg tccttgaccc gcgcgtcgcc gagctggctg tcgcgcagcc
     2461 gcgtgaccgc atcgtattca tacagccctt gcagcgcctt ggtggtcgac ttgatgtgcc
     2521 actcgatgag cggcgcgccg agcgctttgg cgatctcgat cgccagcacg gtcttgccgg
     2581 tccccggctc gcccttgacg aggagcggcc gctcgagcgc gatggcggcg ttgaccgcga
     2641 ccttgagatc gtcggtcgcg acgtaggcgc tcgttccttc aaaacgcatt ccgaggtcct
     2701 tcaactgcct ctgcaccgat taagcgcttc cgattaggcg cgcccgacta ggcgggcgcc
     2761 cgataaagca cggctgactt gacgtcacaa ggcgccgggc tggcgcgccg cgtcggcccg
     2821 cggcacctgg gcgctcggca aattttgccg gcggttgcgg ccattcttgc ccgtcccgcg
     2881 gtggcatttt accacccatt gaccatgaag gcgcaacgtg gacgcatgcg catctgcgga
     2941 ccgagtgggc tcgctgtcgc tccgaacccc gcgtccgtcg ggtgcgccgc gcaggcggcg
     3001 cttcgcccct tccgaaaccg acgcgccgca ggcgaccagc ccgacgatcg cgttgcgcac
     3061 gcgcgcgggc atcaatgcct tgatcgcctt gcagggggtc gaggatccgg gcgagcggcg
     3121 gcggcgcgcg atcgagcggg gcaggcgggc gctcgatgcg ctcgacgagc tcaagctcgc
     3181 ttgctcggcg gctgcctcga ccaggcaatg cggttgcggc tgaaatccgt cgctgccgac
     3241 ctcagggacg gctcggggga cgagaagctc gaccaggtcc tgggcgaaat cgacctgcgg
     3301 gtagcgctgg aactggccaa ggccggggtg gtctgactcc catccccgcg cgggggccgc
     3361 cgggcgttcg agacattccg cgagcgccgt tatccgccgg gcggcggcgc catcatcgtt
     3421 attgtcacgt cacataccct ggtatatagg ccagcccgcg gggaggacct cgcgcagttc
     3481 gtgcgcggag tagtagggaa atgcagtcgg tcaagagcaa aaacggtcga tccgacgact
     3541 cgttgcacaa gaacggcaag agcatccggc cattcgagaa actctaccgg ccatcggacc
     3601 gggagccgtt catgaacgag aggcagcggg aatatttccg catgaagctg ctcgattggc
     3661 gggaggatat cctcaaggaa gccaaggaaa cgctgcagca ccttcaggac gacaaccaga
     3721 atcatcccga ccttgccgac cgcgcctcct cggagaccga ccgggcgatc gagttgcgcg
     3781 cgcgcgaccg ccagcgcaag ctgattgcca agatcgatgc ggcgctggcg cgcattgagg
     3841 acggcaccta cggctactgc gaggagaccg gcgagccgat ctcgctcaag cgcctggaag
     3901 cgcgtcccat cgccaccctg tcagtcgagg cgcaggaacg ccacgagcgc cgcgagcggg
     3961 tctaccgcga ggagtgagcg agggcgcgct cgtccgcccg gtccgcggag gcatggagtc
     4021 ctcggttcca gctcgccggg aataggcgag cgtgggccgg tagacggcgg tcgcggtagc
     4081 aatggcgcgt cgcactaacg aggccgcgtt cacccttatc cacggggagc gtccatgaac
     4141 gagcaaataa agacggtcgc aggcgcgccg ctcttcaatc cgctggcgcc ggagttcatt
     4201 gccaatccgt atccgtacta ccagcggctg cgtgaaaccg acccgatgca cctcacgccg
     4261 ctcggctttt atgtcgccag ccggcatgcc gacattgcca ccgtcctgcg cgacaagcgt
     4321 ttcggcaagg attttgctgg ccggatgagc cggcgtcacg gccctgagat tctcgaggag
     4381 ccggtctatc gcagcatgcg ccactggatg ctgcagcagg atccgcccga ccatacccgc
     4441 ttgcgtgggc tcgtggtgcg cgccttcacg gcgcgccgtg tcgaggatat gcgcccgcgc
     4501 attcaggaga tcgtcgacgg gatcatcgac cgcgtcgaag cccgcggccg catggacctg
     4561 atcgccgatt tcgccttccg cctcccggtc accgtgatct gcgacatgct cggcataccg
     4621 gcggaggacc gggagctgtt cttcaccagt tcgcgcaccg gggggcgcct gctcgacccc
     4681 gtgccgctca gtcgcgccga gatcgagcag cacaatgcgt ccaatctcgc ggcggccgaa
     4741 tacttccatc ggctgttcga gttgcgccgg cgccagccgg gcgaggatct tacgacccaa
     4801 ctggtgcagg ccgaagagcg cggcagcaag ctctcgaacg aggagctgac cgcaaacgtc
     4861 atcctgctgt tcggtgccgg tcatgaaacg accgtgaacc tgatcggcaa tgacctcctg
     4921 gcgctgcacc ggaaccccga ccagcttaaa ctactgcgcg aggatccctc gcttaccgcc
     4981 ggcgccgtcg aagaactcct gcgctatgat tcgtccgtgc aggttactgg ccgcaccacg
     5041 ctcgaagacg tcgacgagat cggcggtatc gcgctggcca agggccagtc ggtcatatgc
     5101 ttgctcggtt cggcc
//
LOCUS       DATMQB010000335        11160 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1080701, whole genome shotgun sequence.
ACCESSION   DATMQB010000335 DATMQB010000000
VERSION     DATMQB010000335.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 11160)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11160)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11160
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1080701"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1188)
                     /locus_tag="VNY79_09605"
     CDS             complement(<1..1188)
                     /locus_tag="VNY79_09605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HWX72744.1"
                     /translation="MPRPRDFIIGPWRAVAVLGVTQILAWGALFYPPVLTIPLIAADR
                     GWSQAFAMAGFSVGLFCGGLVSRNVGALIDRFGGHVVMPFGSLIGALGLVGLVAAQKP
                     WLYFGVWVVLGVAMAASLYDPAFASIARIFGAAARAPITALTLVAGFASTVSWPATQF
                     LIGSVGWRGTYLVYAALLAFLAAPLHAFALPRRRAERAAPAQAVDSRRAVVLPPRGLP
                     FVLVATAFASYAFVPSALSAQLLAIFERFGLSPTVVVAIGMLFGPAQVLARLCEFSFG
                     RHLHPLWSARFAAGVLVTAFVPLAVLPFSTPVAATFAVMFGMANGLMTIARGTVPLAL
                     FGASGYGLLVGRIGGSFLVVQSLAPVLVASIAEHTSDGLALTVVAAFAAASLFCFAAM
                     RSPA"
     gene            complement(1282..1815)
                     /locus_tag="VNY79_09610"
     CDS             complement(1282..1815)
                     /locus_tag="VNY79_09610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72745.1"
                     /translation="MGVSLRNLRLLASAAGFAALALAGCSANQQPVDAAVAPSPALAP
                     EIPASIRPEEVVGRWGYGAYHNETDRARTEAAARGQCGQPVVINRGPNGGVMMYLADS
                     AQLQELRLKGSQSGKNYVGPAGPVGGAQDREIVHFDGRSLILRWMDPEISGRYGTGVY
                     VRCGPEGVARSTRQSVR"
     gene            2230..2526
                     /gene="groES"
                     /locus_tag="VNY79_09615"
     CDS             2230..2526
                     /gene="groES"
                     /locus_tag="VNY79_09615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HWX72746.1"
                     /translation="MAKLKFRPLHDRVVVKRIEAEEKTKGGIIIPDTAKEKPQEGEIV
                     AVGPGGRDENGKLITMGVKAGDRVLFGKWSGTEVKIDGDELLIMKESDIMGVIA"
     gene            2684..4321
                     /gene="groL"
                     /locus_tag="VNY79_09620"
     CDS             2684..4321
                     /gene="groL"
                     /locus_tag="VNY79_09620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798831.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HWX72747.1"
                     /translation="MAAKEVRFSGDARDRMLRGVETLANAVKVTLGPKGRNVVLDKSF
                     GAPRITKDGVTVAKEIELEDKFENMGAQMVREVAQKTNDQAGDGTTTATVLAHSIVKE
                     GVKAVAAGMNPMDLKRGIDLAVTAVVADIKKRAKKVGSSSEVAQVGTISSNGDVTIGK
                     MIAQAMQKVGNEGVITVEEAKALETDVEIVEGMQFDRGYLSPYFITNAEKMLAELEDV
                     YVLLHEKKLSGLQALLPVLEAVVQAGKPLLIIAEDVEGEALATLVVNKLRGGLKVAAV
                     KAPGFGDRRKAMLEDIAVLTGGQLIAEDLGIKLENVNVAMLGRAKKVVIEKEKTTIVD
                     GAGKKKDIEARVNQIKQQIEETTSDYDREKLQERLAKLAGGVAVIRVGGATEVEVKEK
                     KDRVEDALNATRAAVEEGIVPGGGVALVRARKAIGKLTNANEDVQAGINIVLKALETP
                     LRQIAENSGVEASIVVNKILENKSETFGFDAQTEDYVDMVEKGIVDPAKVVRAALQDA
                     ASVASLLVTTEAMVAELPKEKPAMPPMPGGGMGGMDY"
     gene            4504..5268
                     /locus_tag="VNY79_09625"
     CDS             4504..5268
                     /locus_tag="VNY79_09625"
                     /inference="COORDINATES: protein motif:HMM:NF016300.4"
                     /note="The SIMPL domain is named for its presence in mouse
                     protein SIMPL (signalling molecule that associates with
                     mouse pelle-like kinase). Bacterial member BP26, from
                     Brucella, was shown to assemble into a channel-like
                     structure, while YggE from E. coli has been associated
                     with resistance to oxidative stress; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIMPL domain-containing protein"
                     /protein_id="HWX72748.1"
                     /translation="MATSILAATLPFPPAWRRCRSGTAALAAAVVLAIVPAHAQQPQS
                     PAEARVVVTGEGSVSVPPDHATIGGGVTTRAKTAKEAADANAKLMATVMAALLDAGIA
                     QKDIKTTQFSIQPVYAAPEPRAEPKLTGYGVSNQVNVSIREIAKTGEILDRLVTAGAT
                     DVGSIVFSVADPAAALDRAREAAVADARRKAELYARAAGLPLGRVAWITEDLGYEPPV
                     PMGALHAAAARAKATPISTGEDTLHARITVGFDIAR"
     gene            complement(5292..6950)
                     /locus_tag="VNY79_09630"
     CDS             complement(5292..6950)
                     /locus_tag="VNY79_09630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate permease"
                     /protein_id="HWX72749.1"
                     /translation="MWNQVYDPFGNSALSTIAAALPVVSLLVLIASGKVKAHLAAVIA
                     LVVALLVAIFLFTMPAGMALRAAVLGAVSGFFPIGWIVLNVIFLYRLTVVTGAFDTLS
                     QAIGGVTRDRRLQLLLIAFSFGAFFEGASGFGTPVAVTGAILIGLGFSPLAASGLSLI
                     ANTAPVAYGALGTPIAGLASVTGLDPYLLGAMVGRQLPFFSLIVPFWLIWTFAGFRGV
                     LQIWPAVLVCGVSFAVPQFLISNYINPWIVDIGASLISMACLIGFLRIWQPKELWLSP
                     ALRTRDDSAATMPVTPAPKIAEPTSAAVWRSLLPWIIVCVLLLIWGTGWFKGQVNPIF
                     SWSYEVPGLDRMINKVAPVVAKPTPERGQFLFTYLSYTGTGMLIAAIISGFVMGFSPV
                     KLVAEYGRTIKICAYPLITISAMLAIGTLTRLSGIDVTLGLAFAATGVLYPFFGALLG
                     WLGVALTGSDTASNILFGNLQKITSEQLNLSPILMSAANSSGGVMGKMIDAQSIVVAS
                     TATNWFGHEGTILRFVFFHSIALACLVGVLIMLQAYVFTGMIVH"
     gene            7392..8270
                     /locus_tag="VNY79_09635"
     CDS             7392..8270
                     /locus_tag="VNY79_09635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018453695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0008757 - S-adenosylmethionine-dependent
                     methyltransferase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HWX72750.1"
                     /translation="MTTALADPFARLKASEREHWASFAPAAIFSTVPAAKLVKFAQVS
                     PGQRVLDVGCGTGVVAITAARRGAKVSGLDLSPDLLHRARDNAVTAGVEIDFLEGDAE
                     ALPYPDATFNIVLSQFGHIFAPRPEVAVREMLRVLKLGGRLVFSAWPPEHFGGRQFGL
                     LARYAPPPAPGAEQPASPASWGDPNIIRERLGSTVTSLLFERDIMVVASLSPQHTRIA
                     QEKTIGPLAKLIAALHSDPGKLARLRTEYEEMIGEVFEDNALHLHFIMARAVRRGSAR
                     YVQNKPGNDRPARTRS"
     gene            complement(8303..8710)
                     /locus_tag="VNY79_09640"
     CDS             complement(8303..8710)
                     /locus_tag="VNY79_09640"
                     /inference="COORDINATES: protein motif:HMM:NF015669.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="META domain-containing protein"
                     /protein_id="HWX72751.1"
                     /translation="MADLRQRLACLLCAVVATLAWPAFASEQAFPFARELMLDVAPMR
                     GSKRVPIIEIADNGAAVIQLWCASTSGQASIDKDSITITAGEVPPAQCEPERQTRDDN
                     LLAALAQVTSWRRRGDVIEFIGATTLRFRLMTN"
     gene            9187..10935
                     /locus_tag="VNY79_09645"
     CDS             9187..10935
                     /locus_tag="VNY79_09645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011475130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HWX72752.1"
                     /translation="MQNFLSTIATIWRLSLPYFRSEDRWPARILLAAVVALELSGVAI
                     HVILNQWYNRFYNTLQDRDWNAFVSAILFFCVLVAIYTVLVVYQVYLNQWLQIRWRRW
                     MTQNYLRHWLSAANHYRMQLLGDAADNPDQRIAEDMQLFVQFTLSISIGILNSIVTLC
                     SFIVILWTLSARAPLHLFGSSVNIPGYLVWAALIYAAIGTTLTHLIGRKLIPLNFQQQ
                     RLEADFRFNLVRTRENSEQIAALGGEPAEREGHLNRFGLVVGNWFALMQRQKLLSFFT
                     QSYSQASVIFPYIVVSPTYFSGAVQLGGLMQTASAFNSVQSALSYFITSYRSIAEWRA
                     VVQRLTGFQEALAAGRAAALTPPVIEVVPREGEAALTIDHLKVRLPRGKLIVGVENLA
                     LRAGEHVLVTGPSGAGKSTLFRALGGIWPFGSGRVTVPKDAKVMLLPQRPYFAVGTLA
                     AAVSFPAKAGALDNARIAEALVAVGLPDLVGRLGEEAHWNRMLSLGEQQRLGIAHVLL
                     QPPDYLLLDEATASLDEAAEAALYRLLQERLKGATIISIGHRSTLGAFHGRRIALMAA
                     DEFHQAREVTLVPAAE"
BASE COUNT         2142 a         3643 c         3646 g         1729 t
ORIGIN      
        1 ggccggcgag cgcatggccg caaaacagaa cagcgacgcg gccgcgaacg cggcgacgac
       61 cgtcaatgcg agcccgtctg atgtgtgttc ggcgatcgag gccaccagta ccggggccag
      121 cgattgcacg accagaaacg aaccgccgat ccgtcctacc agcaggccat agccgctcgc
      181 cccgaacagc gccagcggca ccgtgccgcg cgcgatggtc atgaggccgt tggccatgcc
      241 gaacatcacg gcaaaggttg cggcaaccgg cgtcgagaag ggaaggaccg ccagaggcac
      301 gaatgccgtc accagcacgc cagcggcgaa acgcgcggac cacaacggat gcagatggcg
      361 cccaaaggag aactcgcaaa ggcgggcgag aacttgcgcg ggcccgaaca acatgccgat
      421 ggcgacgacg accgtcggcg aaagcccgaa gcgctcaaaa atcgcgagca gctgcgccga
      481 caacgccgac ggcacgaacg cataggacgc gaaggcggtg gcgaccagga cgaaagggag
      541 gccccgcggc ggcagcacga ccgcccgcct gctgtccaca gcctgcgccg gtgccgcccg
      601 ctcggcgcgc cgacgcggca gcgcgaaggc gtgcagcggc gcggccagga acgcaaggag
      661 cgcggcatag acgagatagg tcccgcgcca gccgaccgag ccgatcagga attgtgttgc
      721 cggccagctc acggtcgagg caaagccggc gacaagcgtg agcgccgtga tcggggcacg
      781 cgccgcggcg ccgaagatcc gggcgatact ggcgaaggcc ggatcgtaca gcgaggcggc
      841 catggcgacg ccgagcacca cccagactcc gaaatagagc cagggtttct gcgcggctac
      901 gaggccgacg agcccaaggg cgccgatcag cgatccaaac ggcatcacca cgtggccgcc
      961 gaaccgatcg atcagcgcac cgacgttgcg ggaaacgagt ccgccgcaaa acaggccgac
     1021 ggaaaagccg gccatggcga aggcttgcga ccagccccga tcggccgcaa tcaaggggat
     1081 agtcagcacc ggcgggtaga acagcgcgcc ccaggcaaga atctgtgtga ccccgagcac
     1141 ggcgacggcg cgccaggggc caatgatgaa gtcgcgcggg cggggcatat cgtcaaagcg
     1201 ccggggtatt cccttcgcgc ttgctgcgag ggagtccggg cgagttcgcg accgctctcg
     1261 aggccgtgtt gacgttactg atcagcgcac cgactgccgg gtggagcgcg ccacgccctc
     1321 cggcccgcag cgcacataaa cgccggtgcc gtagcggccg gaaatctccg ggtccatcca
     1381 gcgcaggatc aagctgcggc cgtcgaaatg gacgatttcc cgatcctgcg cgccaccgac
     1441 gggccccgcc gggccgacat agttcttgcc actctggctg cccttgaggc gcagttcctg
     1501 caattgggcg ctatcggcga gatacatcat gacgccgcca ttcggcccgc ggttgatcac
     1561 cacaggctgg ccgcactggc ctcgcgccgc tgcctccgtc cgcgcccggt cggtctcatt
     1621 gtggtaagcg ccatagcccc atcgaccgac gacctcctcc ggccggatcg acgccggtat
     1681 ctcgggagca agcgccggac tcggcgcgac tgcggcgtcg acgggctgct ggttagcgga
     1741 gcagcccgca agcgcgagcg cggcgaaacc cgcggcactc gcgagcaatc gcagattacg
     1801 cagcgacacg cccatcggac ctctcctcac cgtccagcct gaccgcaatt ttcggccagg
     1861 cgttaaccac ccgtcttgcg ctcgtgctac gcgctcaagg ggcgacgccg acgcccgacc
     1921 ctgtttgacc aaacatttgg ccggcacagt ggccgaattc ctggccgccg cgcccgccgg
     1981 ccatgctcgc ctcgggttta acctttcgtc ctttcgactt tcttgcaaat tttaacattc
     2041 cgctagagcc ctttgcggtg tcgggtgcga ccgcgcctcc ccgacctccg gcgcttgaca
     2101 gggaggtatt gagaccctat ttccggctcg cgtcttggca ctcggctttc atgagtgcta
     2161 agttattctg ataacataac tttctgcgca accacgaagg ccgctggcag agcggcgatg
     2221 agggtgatca tggcaaaact caagttccgc ccgctgcatg accgggtggt ggtgaagcgt
     2281 atcgaggcgg aggagaagac aaagggcggc atcatcatcc ccgacaccgc caaggagaag
     2341 ccgcaggagg gtgagattgt cgccgtcggc cccggcggcc gcgacgaaaa cggcaagctc
     2401 atcaccatgg gcgtcaaggc cggagaccgc gtcctgttcg gcaaatggtc cggcaccgag
     2461 gtcaagatcg acggcgacga actcctgatc atgaaggagt ccgacatcat gggcgtcatc
     2521 gcctgaacag atcggaaaac accgcgggca acccctttgc cgtcatgccc ggcttgaccc
     2581 gggcatccat gcaggggcaa cgccccatgg attgccgggt caggcccggc aatgacgaac
     2641 gagagaagtc cgccgcccga acaaacgcta ggagcaaaca gaaatggcag cgaaagaggt
     2701 acgattttcc ggcgacgccc gcgaccgcat gctgcgcggc gtggagacgc tcgccaatgc
     2761 cgtgaaagtg acgctcggcc ccaaaggccg caacgtcgtg ctcgacaaga gcttcggcgc
     2821 cccgcgcatc accaaggacg gcgtcaccgt cgccaaggag atcgagctcg aagacaagtt
     2881 cgagaacatg ggtgcgcaga tggtgcgcga ggtcgcacag aagaccaatg atcaggccgg
     2941 cgacggcacg acgaccgcga ccgtgctggc ccattcgatc gtcaaggaag gcgtcaaggc
     3001 ggtcgccgcc ggcatgaacc cgatggatct caagcgcggc atcgacctcg ccgtcaccgc
     3061 cgttgtcgcc gacatcaaga agcgcgcgaa gaaggtcggc tcctcgtcgg aagtggcgca
     3121 ggtcggcacc atctcctcga acggcgacgt gaccatcggc aagatgatcg cccaagcgat
     3181 gcagaaggtc gggaacgagg gcgtgatcac ggtcgaggag gcgaaggcgc tggagaccga
     3241 cgtcgagatc gtcgagggca tgcaattcga ccgcggctat ctctcgccct acttcatcac
     3301 caacgccgag aagatgctcg ccgagctcga ggacgtctac gtgctgctgc atgagaagaa
     3361 gctctcaggc ctgcaggcgc tgctgccggt gctcgaggcg gtggtgcaag cgggcaagcc
     3421 gctgctcatc atcgccgagg acgtcgaggg cgaggcgctg gcgacgctcg tcgtcaacaa
     3481 gctgcgcggc gggctcaagg tcgcggcggt gaaggcgccg ggcttcggtg accggcgcaa
     3541 ggccatgctc gaggacatcg ccgtgctcac cggtggtcag ctcatcgccg aggacctcgg
     3601 catcaagctc gagaacgtca acgtggcgat gctcggacgc gccaagaagg tggtgatcga
     3661 gaaggagaag accaccatcg tcgacggcgc cggcaagaag aaggacatcg aggcgcgcgt
     3721 caatcagatc aagcagcaga tcgaggagac cacctccgac tacgatcgcg agaagctgca
     3781 ggagcgcctt gccaaactcg ccggcggcgt cgcggtgatc cgcgtcggcg gcgccaccga
     3841 ggtcgaggtc aaggagaaga aggatcgcgt cgaggatgcg ctcaatgcca cccgcgccgc
     3901 ggtcgaggaa ggcatcgtgc ccggcggcgg cgttgcgctc gttcgcgccc gcaaggcgat
     3961 cggcaagctc accaacgcca acgaggacgt gcaggccggc atcaacatcg tgctcaaggc
     4021 gctcgagact ccgctgcgcc agatcgccga gaactccggc gtcgaggcct cgatcgtggt
     4081 caataagatc ctcgagaaca agtcggagac cttcggcttc gacgcgcaga ccgaggacta
     4141 tgtcgacatg gtcgagaagg gcatcgtcga cccggccaag gtggtgcgcg cggcgctcca
     4201 ggacgccgcc tcggtagcga gcctgctggt caccaccgaa gccatggtcg ccgagctgcc
     4261 gaaggagaag ccggcgatgc cgccgatgcc cggcggcggg atgggcggga tggactactg
     4321 atcctccccg cgattcggca atgatcacgg gcgcggccaa ggccgcgccc ttttttgtgt
     4381 actctgtcgc cggatgatgt gcttcgcacc ccggcgcaac agcgcgtcgc tcgatttcca
     4441 gcgatcgctt cccgcgggtt cgccgatgtt gcatcgatcg agcagaaacg aaggagcccg
     4501 ttcatggcca catcgatcct cgccgcgaca cttccctttc caccggcatg gcgacgctgt
     4561 cgctccggca cggcggcgct cgccgcggcc gtcgtcctcg cgatcgttcc cgcgcacgcg
     4621 caacagccgc aatccccagc cgaggcgcgt gtggtcgtga ccggagaggg cagcgtcagc
     4681 gtaccgccgg accacgccac gatcggcggc ggcgtgacca ccagggcgaa aacggcaaag
     4741 gaagcggccg acgccaacgc gaagctgatg gcaaccgtca tggcggcact tctcgacgcc
     4801 ggaattgcgc aaaaggacat caagacaacg cagttttcga tccagccggt ctacgcagcg
     4861 ccggagccgc gcgccgagcc gaagctcacg ggctacggcg tctcgaacca ggtcaacgtg
     4921 agcatccggg agatagccaa gaccggcgag atccttgatc gtctggtgac ggcgggagcg
     4981 accgacgtcg gcagcatcgt gttttcagtg gccgatcccg cggcggcgct cgaccgagcc
     5041 cgcgaggccg cggtcgccga tgcacggcgc aaggcagagc tttacgcgcg tgccgcgggt
     5101 ctgcccctgg gacgggtggc ctggatcacc gaggacctgg gatacgagcc acctgttccg
     5161 atgggagcgc tgcacgctgc ggcagcgcgc gcgaaagcca cgccgatctc caccggcgag
     5221 gacacattgc acgcgcggat cacggtcggc ttcgatatcg cgcgctaacc gtcgatcgcg
     5281 ccgcgtgccc gtcaatgcac gatcatgccg gtgaacacgt aggcctggag catgatcaag
     5341 acaccgacga ggcaggcaag cgcgatcgaa tggaagaaca cgaagcgaag aatcgtacct
     5401 tcgtgaccga accagttggt cgccgtcgac gcgacgacga tcgactgcgc gtcgatcatc
     5461 ttgcccatga cgccgccgga ggagttcgcc gcactcatga ggataggcga gaggttaagc
     5521 tgctcggacg tgatcttctg caggttgccg aacagtatgt tcgaggcggt atcggagccg
     5581 gtgagcgcca cgccgagcca gccgagcagc gcgccgaaga agggatagag cacgccggtc
     5641 gcggcaaagg cgaggccgag cgtcacatcg atcccagaga gccgcgtcag cgtgccgatc
     5701 gccagcatcg ccgagatggt gatcaacggg taggcgcaga tcttgatcgt gcggccgtat
     5761 tcggcgacga gcttcaccgg cgagaagccc atgacgaagc cggaaatgat cgccgcgatc
     5821 agcatgcctg ttccggtata ggagaggtag gtgaacagga actggccgcg ttcaggcgtc
     5881 ggcttggcaa cgactggggc gaccttgttg atcatgcggt cgagcccggg aacttcgtag
     5941 ctccagctga agatcgggtt gacctggccc ttgaaccagc cggtacccca aatcagcaga
     6001 aggacgcaga cgatgatcca cggcagcagc gagcgccaga ccgccgcgct tgtcggctcg
     6061 gcaattttcg gcgcgggcgt caccggcatg gtcgcggcgg aatcgtcacg ggtgcgcaaa
     6121 gccggcgaca gccaaagctc cttcggctgc cagattctga gaaacccgat caggcaggcc
     6181 atcgaaatga gcgaggcgcc gatatcaacg atccacggat tgatgtagtt cgagatcagg
     6241 aattgcggca ccgcaaagga aacaccgcaa accaggaccg ccggccagat ctgcagcacg
     6301 ccgcggaaac cggcaaaggt ccagataagc cagaacggta cgatcagcga gaagaacggc
     6361 aattgccgcc cgaccatggc gccgagcaga tacgggtcga ggccggtaac gctcgctaac
     6421 cctgcgatcg gcgtgcccag cgcgccgtag gcgaccggcg cggtgttggc gatcagcgac
     6481 agccctgaag ccgcaagcgg cgagaacccg agcccgatga gaattgcgcc cgtcaccgcg
     6541 accggcgtcc cgaaaccgga tgcgccctcg aagaaggcgc cgaaggaaaa cgcaatgagt
     6601 agcagctgca gccgccggtc acgcgtcacg ccaccgatcg cctgggacaa tgtgtcgaaa
     6661 gcaccggtca ccacggtcag ccggtagagg aagatgacgt tgagcacgat ccagccgatg
     6721 gggaagaagc cgctgacagc gccgagcacc gccgcgcgca acgccattcc cgcgggcatc
     6781 gtgaacagga agatcgcaac cagcagcgct accaccagcg caatcaccgc cgcgaggtgt
     6841 gccttcacct tgccggatgc gatgaggacg aggagcgaga cgaccggcag agcggccgca
     6901 atggtcgaga gggcggagtt gccgaacgga tcgtagacct ggttccacat gaggttccct
     6961 ccccttgaag tcgccgctat tgtcgagcgg ctcctttcgg ctgtttcgcc ttcgcgcatc
     7021 ggcgcgtgcg gccgtcgtag gcggcgcacc gcggggaaaa ctcggaccgt ggcgacccgg
     7081 atggttgatt atgccggcag gcagtcctgc gcctgcactc gccccgtgca gcctgccgcg
     7141 gtagacgcga caatccttcc ttcccccggg gccatgttat tgtgaaatgc acgggcacga
     7201 caatatgacc tgtgcattct gcgtcggccc gtcccaacca atgccgaatt cttgtggtgg
     7261 gcatgagccg ccctcgtctc gcccgcgagc catggacagg agtcccttgt gaaacgcctt
     7321 gaattgggaa ccggtgcgtt ccggtgtttc gcccatgcca gctatccccg ggcatcgcgc
     7381 cggagccggc gatgacgact gcgcttgccg atcccttcgc caggctcaag gcgagcgagc
     7441 gcgaacactg ggcgtcgttc gcgccggcgg ccattttcag caccgtgccg gcagccaagc
     7501 tcgtgaagtt cgcgcaggtg tcgccggggc agcgcgtgct cgatgtcggc tgcgggaccg
     7561 gcgtcgtcgc catcacggcg gcgcgccgcg gcgccaaggt gtcggggctc gacctctctc
     7621 cggacctcct ccatcgcgct cgcgacaacg cagtgaccgc cggcgtcgag atcgactttc
     7681 tcgaaggcga cgccgaggcc ctcccctatc ccgatgccac attcaacatc gtgctcagcc
     7741 agttcggaca catcttcgct ccgcgtcccg aggtcgcggt gcgggagatg ctccgggtgt
     7801 tgaagctcgg cggccgtctg gtcttctcgg cgtggccccc ggagcacttc ggcgggcgcc
     7861 aattcggcct cctggcgcgc tatgcgccgc cgccggcgcc gggcgccgag caaccagcct
     7921 cgccggcttc gtggggcgac cccaacatca tccgtgagcg actcggcagc acggtgacca
     7981 gtctgttatt cgagcgcgac atcatggtcg tcgccagtct cagcccgcag cacacccgca
     8041 tcgcgcagga gaaaacaata ggtccgctgg ccaagctcat cgccgcgttg cacagcgacc
     8101 cgggcaagct ggcgcggctg cgcaccgaat acgaggagat gatcggcgag gtcttcgaag
     8161 acaacgcgct gcacctgcat ttcatcatgg cgcgcgcggt caggcgcggt agcgcgcgtt
     8221 acgtgcagaa caagccgggg aacgatcggc cggcgcgaac gcgatcctga atcccgcggc
     8281 gcgcgatccg ggcagggtcc gatcaattgg tcatcaggcg gaagcgcaga gttgtcgcgc
     8341 caatgaactc gatgacatcg ccgcgacggc gccagctcgt gacctgggcc agcgccgcga
     8401 gcaaattatc gtcgcgggtt tgccgctccg gctcgcactg cgccggcgga acctcgccgg
     8461 cagtgatggt gatcgaatcc ttgtcgatgc tggcttgtcc gctcgtactc gcgcaccaga
     8521 gctggatcac ggccgcgcca ttgtcggcga tctcgatgat cggcacgcgc ttggagccgc
     8581 gcatcggcgc tacgtcgagc atgagctcac gcgcaaacgg gaaagcctgc tcactggcga
     8641 aagcgggcca agcgagcgtt gccaccacgg cgcaaaggag gcaggcgaga cgttggcgca
     8701 ggtcagccat tggtcatgtc ccggaagtgc tttgcggagg aacggaaatt tgcggaggaa
     8761 cgaaagacgg ccggacggcc gcgcgggcat ttaatccgcg ccggggcagg cggcgtcaag
     8821 tgcatttcgt cgcgcgtcgc gccaccggtt ccggcgcgcg gcgcttctcg tgcgcgataa
     8881 ttctcaagct cgaccggtcg aggttccacg ctccggcggg acagcgggaa aggaggcata
     8941 aaggaagaac gccccatgct tcggccgacg tgatcacgtt ttttgccacg ccgggcgcga
     9001 ctaggcgatt gccgcgccaa ccgctatgaa acggtcgggc gcttgccaaa agaggacatc
     9061 atcatggtgc aaccgcatag tgacgctttt ttatccggcc gccgacagca ccattgatgg
     9121 gtttgcccag cggcaccgat cgccgcgcat tcgctgccaa ccatagtccc gtcctggagg
     9181 tcgtccgtgc aaaatttcct ctcgacaatc gctacgatct ggcggctgtc acttccgtat
     9241 ttccgctcgg aagaccgctg gccggcgcgc attctgcttg ccgcagtggt cgcgctcgaa
     9301 ctgtcgggcg tcgccattca cgtcattttg aaccaatggt acaaccgctt ctacaatacc
     9361 cttcaggacc gcgactggaa cgcgttcgtc agcgccatcc tgttcttttg cgtgcttgtg
     9421 gccatctaca ccgtgctcgt ggtgtaccag gtctatctca atcagtggct gcagatccgc
     9481 tggcggcgct ggatgacgca gaactatctc cgccactggc tcagcgccgc caatcactat
     9541 cgcatgcagc ttctcggcga tgcggccgac aaccccgacc agcgcatcgc cgaagacatg
     9601 cagctgttcg ttcaattcac gctctctatc agcatcggca tcctcaactc gatcgtgacg
     9661 ctctgctcgt tcatcgtcat cctctggacc ttgtcggcgc gcgcgccgct gcatctcttc
     9721 ggctcgagcg tcaacattcc cggctatctg gtgtgggcgg cgctgatcta tgcggcgatc
     9781 ggaacgacac tcacgcacct gatcggccgc aagctcattc cgctcaactt ccagcagcag
     9841 cgcctcgagg ctgactttcg tttcaatctt gtgcgcacgc gtgaaaattc cgagcagatc
     9901 gccgcgcttg gcggtgagcc ggctgagcgc gaaggccacc tcaaccgctt cggcctggtg
     9961 gtcggcaact ggtttgccct gatgcagcgg cagaagctgc tctcgttctt tactcagagc
    10021 tactcgcagg cctcggtgat cttcccctac atcgtggtca gtccgaccta tttctcaggt
    10081 gcggtgcagc tcggcggcct gatgcagacc gcttccgcgt tcaacagcgt gcagagtgcc
    10141 ctctcctact tcatcacgtc gtaccggtcg atcgccgaat ggcgcgccgt ggtgcagcgc
    10201 ttgaccggct tccaggaagc gctcgccgcc ggccgcgcgg cggcattgac gccgccggtg
    10261 atcgaggttg ttccgcggga aggagaggcc gcgctgacga tcgaccacct caaggtccgt
    10321 ctacccaggg gcaagctgat cgtcggcgtc gagaacctcg cccttcgcgc cggagagcac
    10381 gttctggtga ctgggccttc cggggccggc aagtccacgc tgttccgtgc gctcggcggc
    10441 atctggccgt tcggttcggg gcgcgtgacg gtgccgaagg atgccaaagt gatgctgttg
    10501 ccccagcgtc cctatttcgc ggtgggcacg ctcgcggcgg cggtgagctt tccagcgaaa
    10561 gccggcgcac tggacaacgc ccgaatcgcc gaagccctcg tcgccgtcgg cctcccggac
    10621 ctggtcggac ggctcggcga ggaggctcac tggaatcgca tgctttcgct cggcgaacag
    10681 cagcggctcg gcatcgccca cgtgctgctg cagccgccgg actatcttct cctcgacgag
    10741 gcgacggctt cccttgatga agccgccgag gcggcgctgt accgcctgct gcaggagcgc
    10801 ctcaagggcg cgacgatcat ctccatcggt catcgctcga cgctcggagc cttccatggc
    10861 cgccgcatcg cgctcatggc tgccgacgag ttccaccagg cgcgggaggt aacgctcgtc
    10921 cccgcggccg agtgacggga ccgcgggtgg cggcgaggct tgctcgagcg tgagccacgt
    10981 cccatgtagt ttgagggcgc cggcgtgatt tacgttcagg gaggtgcacg atgaaggcca
    11041 gtgtcgacgg gcgcgtggtc gccgagagcg aggacatcgt cgcgtgccgc ggctatgagt
    11101 attttccccc cgcggcagtg cgcatcgatt ggctggaaaa ggccgaaaag accgaacgcg
//
LOCUS       DATMQB010000336         2159 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4165156, whole genome shotgun sequence.
ACCESSION   DATMQB010000336 DATMQB010000000
VERSION     DATMQB010000336.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2159)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2159)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2159
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4165156"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1675
                     /locus_tag="VNY79_09650"
     CDS             <1..1675
                     /locus_tag="VNY79_09650"
                     /inference="COORDINATES: protein motif:HMM:NF013188.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA];
                     GO_process: GO:0006812 - monoatomic cation transport
                     [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="cation:proton antiporter"
                     /protein_id="HWX72753.1"
                     /translation="RRDIGQIIVASAILEDTAGWVIIAISFGLASSGTMDLRSVSFAV
                     LGTLAFLAVSLTVGRRVVSDLIRWANDHFASDFPVITMILLITIAMALTTYLIGVHTV
                     LGAFVAGVLIGESPILTRHIEEQLRGLIAALFMPVFFGLSGLSADLTILKDPELLLLA
                     IGLIVIASAGKFAGAFVGGKLGRLTGRESLALASAMNARGSTEVIVASIALSAGVFSK
                     NLFTLIVAMAMITTMAMPPMLRWALRRLPLRHAERLRLEREELDARGFVPNLERLLLA
                     VDGSAHVKFASRLAGVIAGSGDKPTTIIELAPQRWPAETVRRNEEQAKEQVRSAAAGT
                     VTLAADPDEETRGSVDVTMRTRRAASPEAVADEAQKGYDLLIVGMEKTRTVRGGFSRE
                     ITRVVGGFNGPLAVAIAGGPVATGIEPIGRILIPVNGTDVSRRAAETGFALARSTGSR
                     VSALYVATGGSNGAGRGRIRRGVDTRRSEEAVLKDIAELADRYDARVRTALRVDAAVE
                     EAILREAKRGSYDLVVLGVTRRPGDTLFFGNMAAALLERCDTAILFVAS"
     gene            complement(1824..>2159)
                     /locus_tag="VNY79_09655"
     CDS             complement(1824..>2159)
                     /locus_tag="VNY79_09655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HWX72754.1"
                     /translation="WNERDAHRRLELVAKAWTEDGSYVDRVRQGHGHNEIDAMIATAQ
                     AHFPGYQLHLASGIETHHEYVRFSWIAGGTNEAPLYIKGTDVAVLAEDGRMRSVVGFV
                     DAAPVPMST"
BASE COUNT          325 a          761 c          710 g          363 t
ORIGIN      
        1 gcgccgcgac atcggccaga tcatcgttgc ttccgcgatc ctcgaggaca ccgccggctg
       61 ggtcatcatc gcgatctcgt tcggactggc ctcgtccggc acgatggacc tgcgttcggt
      121 cagctttgcc gtcctcggca cgttggcgtt cctggcggta agcctcaccg tcggccggcg
      181 cgtcgtgtcg gacctgatcc gctgggccaa cgaccacttc gccagcgact ttccggtcat
      241 caccatgatc ctcctgatca cgatcgcgat ggcgctgacg acctatctga tcggcgtgca
      301 caccgtgctc ggcgccttcg tcgccggcgt gctgatcggc gaatcgccga tcctgacccg
      361 gcacatcgag gagcagctcc gcggtctcat cgctgcgctg ttcatgccgg tgttcttcgg
      421 gctgtccggg ctgagcgccg atctcaccat cctcaaggac cccgaactgc tgctgctggc
      481 gatcgggctg atcgtcatcg ccagcgccgg aaagttcgcc ggcgccttcg tcggcggcaa
      541 gctcggccgc ctcaccggcc gcgaatcgct ggcgctcgcc agcgccatga acgcgcgcgg
      601 ctcgaccgag gtgatcgtcg cctcgatcgc gctgtcggcg ggcgtgttca gcaaaaacct
      661 gttcacgctg atcgtggcga tggcgatgat caccaccatg gcgatgccgc cgatgctgcg
      721 ctgggcgctg cgccggctgc cgctgcgcca tgccgaacgg ctgcggctcg agcgtgagga
      781 gctcgacgcc cgcggctttg tgccgaacct cgaacgcctg ctgctcgccg tcgacggcag
      841 cgcccacgtc aagtttgcct cgcggctcgc cggggtcatc gccggctcgg gcgacaagcc
      901 gaccacgatc atcgagctcg cgccgcagcg ctggccggcg gagaccgttc gccgcaacga
      961 ggagcaggcc aaggagcagg tgcgcagcgc cgccgccggc acggtcacgc tggcggccga
     1021 cccggacgaa gagacccgcg gcagcgtcga cgtgaccatg cgcacccgcc gggcggcgag
     1081 tcccgaagcg gtcgccgacg aggcgcagaa aggctacgac ctgctcatcg tcgggatgga
     1141 gaagacgcgc acggtgcgcg gcggattcag ccgggagatt acccgcgtcg tcggcggctt
     1201 caacggcccg cttgcggtcg cgatcgccgg cggaccggtt gccaccggga tcgagccgat
     1261 cggcaggatc ctcatcccgg tcaacggcac cgacgtttcg cggcgcgccg ccgagaccgg
     1321 cttcgcgctg gcaaggtcga ccgggtcgcg cgtgagcgca ctctacgtgg cgaccggcgg
     1381 ctccaatggc gccggccgcg gccgcatccg ccgcggcgtc gacacgcggc gcagcgaaga
     1441 ggcggtgctc aaggacatcg ccgagctcgc cgaccgctac gacgccaggg tgcgcacggc
     1501 gctgcgcgtc gatgccgccg tcgaggaggc gatcctgcgc gaggccaagc gcgggagcta
     1561 cgacctcgtc gtccttggcg tcacccgccg ccccggcgac acgctgttct tcggcaacat
     1621 ggccgccgcc ctgctcgaac gctgcgacac cgcgattttg ttcgtcgcga gctgacgaag
     1681 tcagcaggcg tagcccggat gaacgaagtg aaatccggga acggtctatt ggcttgaacg
     1741 cctgtcccgg atttcgctgc gctcatccgg gctacttgct aattagctcc ctgtgatccc
     1801 ctgcaccccg gcgcgctcac tcactaggtg ctcatcggca ctggcgccgc atcgacgaag
     1861 ccgacgacag atcgcatccg cccatcttcg gcgaggaccg cgacgtccgt ccctttgatg
     1921 tacaggggcg cctcgttcgt gccaccagca atccagctga agcggacata ttcgtgatgt
     1981 gtctcgatcc cgctggcaag gtggagttga tatccgggga aatgcgcctg ggcagtcgct
     2041 atcatggcgt cgatctcgtt atgcccgtgg ccctgtcgca cgcgatcgac gtaggagcca
     2101 tcttcagtcc aggctttcgc cacgagctcc aggcgccgat gtgcgtcgcg ctcgttcca
//
LOCUS       DATMQB010000337         3105 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2009106, whole genome shotgun sequence.
ACCESSION   DATMQB010000337 DATMQB010000000
VERSION     DATMQB010000337.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3105)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3105)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3105
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2009106"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1206
                     /locus_tag="VNY79_09660"
     CDS             <1..1206
                     /locus_tag="VNY79_09660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-deoxy-D-manno-octulosonic acid transferase"
                     /protein_id="HWX72755.1"
                     /translation="KRGKEHAARLAERRGEPSLPRPPGPLVWVHGASVGEMLAVIPLI
                     ERIRALDFAVLVTSGTVTSAALAEQRLPQGALHQFIPLDAPRFVARFLDHWRPDLALF
                     VESDLWPNLILACTDRTVPMILVNGRLSKRSFSRWRLLPGTIAALLKRFDLCLTQSSA
                     DTQRYASLGAPRVSRVGNLKLDAPAPPVDEQIFGQLKSLVGARAVVAAASTHPGEESA
                     IIAAHQRLRAKRPSLLTLIAPRHPARGPGIADIARAAGLSVALRSRGELPNRDVEIYV
                     ADTLGELGLIYRLAPIVFMGGSLARRGGQNPIEAVRMGAAVMHGPHVWNFGEIYATLD
                     AAHGAESVADADALTARLGEWLAKPAERATVADAAQATVDKLGGALERTLAALEPYLM
                     QLRLEQRAS"
     gene            1363..2358
                     /gene="lpxK"
                     /locus_tag="VNY79_09665"
     CDS             1363..2358
                     /gene="lpxK"
                     /locus_tag="VNY79_09665"
                     /EC_number="2.7.1.130"
                     /inference="COORDINATES: protein motif:HMM:NF014645.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009029 - tetraacyldisaccharide 4'-kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetraacyldisaccharide 4'-kinase"
                     /protein_id="HWX72756.1"
                     /translation="MREPAFWWKRGSGKLLVPLAGLYGAAAAWRMHAEGQRAGVPVVC
                     LGNLTVGGAGKTPAAIAVARLLLAARARPFFLTRGYGGRLHGPVRVDPAAHGSADVGD
                     EPLLLARLAPTIVARERVAGAAMARRDGATVVVMDDGFQNPSLVKDLAILVVDGRRGI
                     GNGRMIPAGPLRAPLNMQMARAQALIVVGPAADAAALFEVARRYNVRVFHGRLEPERS
                     ALAALGTSKILAFAGIGHPEKFFATLADAGIEVAERASFPDHHRYTAAEAQTLLRRAE
                     AANLVLLTTEKDLARLAGEPHLAALAAHASALPVRLVIEEHDAFRDMIVKAVKRR"
     gene            complement(2451..>3105)
                     /locus_tag="VNY79_09670"
     CDS             complement(2451..>3105)
                     /locus_tag="VNY79_09670"
                     /inference="COORDINATES: protein motif:HMM:NF014647.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="BMP family ABC transporter substrate-binding
                     protein"
                     /protein_id="HWX72757.1"
                     /translation="VAAGKMTKSNTLGFVVGVPIGYAIGNINAFELGARSVNPAAKTR
                     VVVTGGWSDKAKEAEAANALIDQGADVVTMHVDSPATIIQIAEGRGSYSIGFQSLEAR
                     ALAPKGWLTGLGFTWGPFMTETAKSVIAGAFKPAMVRLGLGQGMVTVAPFGTAVPADV
                     RELVTAAADRIGKGFNPFTGPVSDNTGAVRIKEGESWGGDKMGSFDWYAEGVIGKAK"
BASE COUNT          466 a         1089 c         1004 g          546 t
ORIGIN      
        1 aagcgcggca aggagcacgc cgcgcggctc gccgagcgcc ggggtgagcc ttcgctgccg
       61 cgcccgcccg gtccgctggt ctgggtgcac ggagcgagcg tcggcgaaat gctcgccgtc
      121 attcctctga tcgagcgcat ccgcgctctg gattttgcgg tgctggtcac ctccggcacg
      181 gtgacgtccg cggctcttgc cgaacaacgg ctgccgcagg gcgccttgca tcagttcatc
      241 ccgctcgatg cgccgcgctt cgtcgcgcga tttctcgacc attggcggcc ggatctcgcg
      301 ctgttcgtcg aatccgatct atggcccaat ctcatcctcg cgtgcacgga ccgcaccgtc
      361 ccgatgatcc tggtcaatgg ccgcctgtcg aagcgctcgt tcagccgctg gcggctctta
      421 ccgggaacga ttgccgcgct gctcaagcgc ttcgatctgt gcctgaccca atcgagcgcc
      481 gacacgcaac gctatgccag cctgggcgca ccgcgcgtca gccgcgtggg caatctcaag
      541 ctcgacgcac ccgccccgcc cgtcgacgaa cagatattcg gccagctgaa gtcgctcgtc
      601 ggcgcccgcg ccgtcgtcgc tgcggcctcc acgcatcccg gcgaggagag cgccatcatc
      661 gccgcccatc agcggctacg cgccaaacgc ccatcgctgt tgaccttgat tgcgccgcgc
      721 catccggcgc gcggtccggg catcgcggac atcgcgcggg ccgctggcct ttccgttgcc
      781 ctgcgctccc gcggcgagtt gccgaaccgc gatgtcgaga tctacgtcgc cgacacgctc
      841 ggcgagcttg gcctgatcta ccggctcgct ccgatcgtgt tcatgggcgg ctcgctggcg
      901 cggcgcggcg ggcagaatcc gatcgaggcg gtcaggatgg gcgccgccgt catgcatggc
      961 ccgcacgtct ggaatttcgg cgaaatctac gccacgcttg atgcagcgca tggggccgaa
     1021 tccgtcgccg acgcagatgc tctgaccgct cgtctgggcg agtggctcgc caagccggca
     1081 gagcgtgcga ccgtggccga tgcggcccag gcgacggtag acaagctcgg tggcgcgctc
     1141 gaacggaccc ttgccgcgct cgagccttat ctgatgcagc ttcgccttga gcagcgggcc
     1201 tcgtagagca tgttccggaa agtggaaacc ggttttccga caagatcatg ctccactaag
     1261 gaaaacctga tcgcaatcga ttaagcttga aacggatgcg ttctagaggt cgcgcatgag
     1321 cctttgcgaa cgtcggtctg cgcttttcgg gatcacgcgc tgatgcgcga accggccttc
     1381 tggtggaagc gcggcagcgg aaaactgctc gtgccgctcg cggggctcta cggcgctgct
     1441 gctgcctggc gcatgcacgc cgaggggcag cgcgccggcg tgccggtcgt ctgtctcggc
     1501 aatctcaccg tcggaggcgc cggcaagacg ccggcggcga tcgcggtggc gcgtcttctc
     1561 ctcgccgcgc gcgcgcgccc attctttctc acccgcggct acggcgggcg gttgcacgga
     1621 ccggtgcgcg tcgatcctgc cgcgcatggc tcagccgacg tcggcgacga gccgctcctc
     1681 ttggcgcggc tcgcgcccac catcgtggcg cgcgagcgcg tcgcgggcgc agcgatggcg
     1741 cgacgcgatg gcgccaccgt cgtcgttatg gacgacggct ttcagaatcc gtcgctggtc
     1801 aaggatctgg cgatcctcgt ggtcgacggt cgtcgcggca tcggcaacgg caggatgatt
     1861 ccggccggtc ccttgcgcgc gccgctcaat atgcagatgg cgcgcgcgca ggcccttatc
     1921 gtggtcggcc cggcggccga tgccgcagcg ctcttcgagg tcgcgcgccg ttacaacgta
     1981 agggtcttcc acgggcgcct cgaacccgag cgcagcgcgc tggcggcgct cggcaccagc
     2041 aagattctcg ccttcgccgg cataggccat ccggaaaaat tcttcgcgac gctcgccgat
     2101 gcggggatcg aggtcgcgga acgcgcgagc ttccccgacc atcatcgcta cacggcggca
     2161 gaggcgcaga cgctcctgag acgcgcggaa gccgcgaacc tggtgctgct caccaccgaa
     2221 aaggatctcg cacggctcgc cggtgaaccg catctcgcgg cgctcgccgc gcatgcgagc
     2281 gcgctgcccg ttcgcctcgt gatcgaggag cacgacgcct tccgcgacat gatcgtcaag
     2341 gcggtaaagc ggcggtagtg cctcctttca ccgagcggtt gagccgtgct tgccaccggc
     2401 gcgcgccgtc ttccggtcct caccaacgcg acaacgggtc gggccaatcg tcatttggcc
     2461 ttgccgatca cgccttccgc gtaccaatcg aagctgccca tcttgtcgcc gccccaggac
     2521 tcaccttctt tgatgcggac ggcgccggta ttgtcggaga ccggaccggt gaacggattg
     2581 aagccctttc caatccggtc ggccgcggcg gtcacgagct cgcggacatc agccggcacc
     2641 gcggtcccga acggcgcaac cgtcaccata ccctggccca gtccgagcct taccattgcc
     2701 ggcttgaagg cgccggctat gacgctcttc gcggtctcgg tcatgaacgg cccccaggtg
     2761 aagcccaatc ccgtgagcca gcctttcggc gcgagtgcac gcgcctcgag cgactggaat
     2821 ccgatcgagt agctgccgcg gccttccgcg atctgaatga tcgttgccgg cgaatcgacg
     2881 tgcatggtga caacgtcggc gccctggtcg atgagtgcat ttgcggcttc ggcctctttc
     2941 gccttgtccg accagccgcc ggttaccacc acgcgggtct tcgccgccgg attgaccgaa
     3001 cgcgctccga gctcgaaggc gttgatgttg ccgatggcgt agccgatcgg aacgccgacc
     3061 acgaagccga gcgtattcga cttcgtcatc ttgccggccg ctacg
//
LOCUS       DATMQB010000338         3853 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2309543, whole genome shotgun sequence.
ACCESSION   DATMQB010000338 DATMQB010000000
VERSION     DATMQB010000338.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3853)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3853)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3853
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2309543"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..2432
                     /locus_tag="VNY79_09675"
     CDS             <1..2432
                     /locus_tag="VNY79_09675"
                     /inference="COORDINATES: protein motif:HMM:NF024589.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HWX72758.1"
                     /translation="VLGEAAVESRFAAIRTGTLPLVGRAHEMGLMLERWRLARSGEGQ
                     IVTVVGEAGIGKSRAIEALQEDVAHEPHTRIHLQCSPYHRDSALYPVIQHLSRAAGFA
                     PADSADARIDKLRVMFARRAASDEAAVPLLAELLSIPAGASLAQLSLTPAQRKAATIA
                     LLVDEIVRLGESDPVLVVLEDAHWIDPTMLELMTRLADSLGHAHLLALVSARPDFAPP
                     WLTRPHATLLTLNRLSRAECARLVANVAAAHGLQAETVAAIVAKTDGVPLFVEELTKS
                     VVESAGEDSAAVPATLKDSLMARLDRLDEAREVAQIAAVIGRQFAFALLVAIAARDGA
                     ALDAALDKLVAAGIVFPEGRGLERSYSFKHALVRDAAYESLLLGRRREWHERIARALE
                     QGFPELVANEPELLAYHFAEGGSLAQACDYRMRAGDRAVSRSAYQEEVAHFSAGLRLA
                     DALPDPADQARRQLDFLLKLGPALMVVRGMQSAEVEDAYRRAADLGIGLGDDAATFKA
                     KWGLWLNATIKRKTALGRERARELVTLAQRSSDGELLLEAYHCRWSTAFFRGDVAEAL
                     DNTLVGVETYDLARHRHLGHAFGGHDPGVCAHVVRANALQLSGDALGAKMSARQGVAL
                     AETLGHPNTLGHALHNACMAHQLGGEREAALAAAQRAADLAEKFALSPWRASSLVVKG
                     WATAVGGVEEAAQLIDREIDKATAAGPVPQYYLGLAAEVLLAAGRPADGLAHLDRAIA
                     TGDEPGVGFYLPEIYRLRGECLLALGRDRKEEARQAFATARDVARQQGAVIFERRAEA
                     SLAEVANITGV"
     gene            2540..3832
                     /locus_tag="VNY79_09680"
     CDS             2540..3832
                     /locus_tag="VNY79_09680"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HWX72759.1"
                     /translation="MSSTEPSQNNQAPLQGLRVLDLSSMIAGPHAAQILADYGADVIK
                     IEPPEGDLMRRGIGAARSADMGPLYLQLNRNKRSLALDLKQPAARKALLQLCATADVL
                     VHNIRPAAMRRLALSYEDVRKVNPRLVYVGVMGYGESGPYAGKPAYDDLIQGFCALPA
                     LVARAAECEPRYVPMTVVDRIVGINAAHAILAAVLRRDRTGEGQCVELPMFETMAQFV
                     LGDHLGGRSFEPPTGDAGNPRLASGSRRPYATGDGYVCALVYTDKQWKAFFEGRGRLD
                     LYAAYPHLMDFASRRHHFSEVQGIIADVLRTLTTVEALSLFERCDIPCAPMNDLDALI
                     DDPHLAAVEFFQTRTHPTEGQIRYNGIPSRWNGAALKITRHAPRIGEHSVAVLKEAGV
                     PAAEIGALLESGATVDGGLVAEAGAAALEPVAGKNSMP"
BASE COUNT          623 a         1275 c         1303 g          652 t
ORIGIN      
        1 gcgtgctcgg cgaagcggcg gtcgagagcc gcttcgccgc gatccgcacc ggtacgctgc
       61 cgctcgtcgg ccgggcgcac gaaatggggc tgatgctcga gcgctggcgt ctcgcccgct
      121 cgggcgaggg tcagatcgtc accgtggtcg gcgaggctgg tatcggcaaa tcgcgcgcga
      181 tcgaggcgtt gcaggaagat gtcgcccatg agcctcacac ccggattcac ctgcagtgct
      241 cgccgtatca ccgcgacagc gcgctctatc cggtcatcca gcatctctct cgcgctgccg
      301 gatttgcgcc agcggactct gcagacgccc gcatcgacaa gctccgggtc atgttcgccc
      361 ggcgggccgc gtcggacgaa gccgcggtcc cattgctggc tgagctcctg tcgattccgg
      421 cgggggcctc gctggcgcaa ttgtcgctca ctccggcgca acgcaaggcg gcgaccatcg
      481 cgctccttgt cgacgagatc gtccgtttgg gcgagagcga tccggtcttg gtggtgctgg
      541 aggacgcgca ctggatcgat cccaccatgc tcgaattgat gacgcgcttg gccgacagcc
      601 ttggccacgc gcacctgctt gccctcgtga gcgcgcggcc ggatttcgcg ccaccctggc
      661 tcacgcgtcc gcacgccacc cttctgacct tgaatcgcct gagccgcgcc gaatgcgccc
      721 ggctggtcgc caacgtcgcc gccgcgcacg gcttgcaggc ggaaacggtc gcggcgatcg
      781 tggccaagac cgatggcgtg ccactcttcg tcgaggaatt gaccaagagc gtggtggaat
      841 cggcgggcga ggacagcgcg gcggtgccgg cgacgctcaa ggattcattg atggcccggc
      901 tcgaccgcct cgacgaggcg cgcgaggtgg cgcagatcgc cgcggttatc ggccggcaat
      961 tcgccttcgc gctgcttgtc gcgatcgccg ccagggacgg tgcagcgctc gacgccgcgc
     1021 tcgacaagct ggtcgcggcg ggcatcgtct ttcctgaagg gcgcggcctg gaacgcagct
     1081 acagcttcaa gcacgcgctg gtgcgggacg ccgcctacga gagtctgctg ttgggccgcc
     1141 ggcgcgagtg gcatgagcgc attgcgcgtg cgctcgaaca aggcttcccc gaactggtgg
     1201 ccaacgagcc ggagctcctc gcctaccatt tcgccgaggg cggatcgctc gcgcaggcct
     1261 gtgactatcg catgcgcgcc ggtgaccgcg ccgtgagccg atcggcgtat caagaagaag
     1321 ttgcgcattt ttcggccggt ctcagattgg ccgatgcgct gccggaccct gccgatcagg
     1381 cgcgccgtca gcttgatttc ttgctgaagc tcggcccggc gctgatggtc gtccgtggga
     1441 tgcagagcgc cgaagtcgag gacgcctacc gccgcgccgc cgacttgggc attgggttag
     1501 gcgacgacgc agctacgttt aaggccaaat ggggcctctg gctcaacgcc accatcaaaa
     1561 gaaagacagc gctcggacgt gagcgagcgc gcgaactggt gacgctcgcg cagcgctcca
     1621 gcgacggcga gctgttgctg gaggcttatc attgccgctg gtcgacggcc tttttccgtg
     1681 gcgatgtcgc cgaggctttg gacaataccc tggtcggggt cgaaacctat gatcttgcgc
     1741 gccaccgtca ccttggtcat gccttcggcg gtcacgaccc tggcgtctgc gcccacgtgg
     1801 tacgcgcgaa cgcactgcaa ttgtccggcg acgcgctggg ggcgaagatg agcgctaggc
     1861 aaggagttgc gctcgccgag acgctcggtc atcccaatac tctcggccat gcgcttcaca
     1921 atgcgtgcat ggctcaccaa ctcggcggcg agcgtgaggc tgccctcgcg gccgcgcaac
     1981 gcgccgcaga cctggccgag aaatttgcgc tctcgccgtg gcgcgctagc agcttggtgg
     2041 tgaagggttg ggcgacggcg gtaggcggtg tggaggaggc agcgcagctc atcgatcgcg
     2101 aaatcgacaa ggccacggcc gctgggccag tgccgcaata ttatctcggt ctggcggccg
     2161 aggtactgct cgctgcgggc cggcccgccg acggtctcgc tcaccttgac cgcgccatcg
     2221 ccacggggga tgaacccggc gtgggctttt atctgccgga aatctaccgc ctgcgcggcg
     2281 aatgcctgct cgcgctcggc cgcgaccgaa aggaagaggc gaggcaggca ttcgcgacgg
     2341 cccgcgacgt tgcccggcag cagggcgccg tgatcttcga acgccgtgcc gaagcatccc
     2401 ttgcggaggt tgcaaacatc accggcgttt gatggattgg acggagtgcg tttcgcaaca
     2461 tcggccctca tcgacgggat tgcggaagca tcatcgagga tgcggcggaa acaccagtac
     2521 cggcgagcag atgatgccca tgtcgtcgac tgagccttcg caaaacaacc aagccccgct
     2581 gcaggggctg cgcgttctcg acctctcctc gatgatcgcc ggcccgcacg ccgcgcagat
     2641 actcgccgac tacggcgccg acgtgatcaa gatcgagccg ccggaaggcg atctgatgcg
     2701 caggggcatc ggcgcggctc gaagcgccga catggggccg ctctacctgc agctcaatcg
     2761 caacaagcgc agcctcgctc ttgacctcaa gcagccggcg gcgcgcaagg cgctgttgca
     2821 actgtgcgcg acggccgatg tcctcgtcca caatatccgt ccggcggcga tgcgccgcct
     2881 cgcgctcagt tacgaggatg tgcgcaaggt caatccgcgg ctcgtctatg tcggcgtgat
     2941 ggggtacggc gagagcgggc cctacgccgg caagcccgcc tatgacgatc tcatccaggg
     3001 cttctgcgcg ctcccggcgc tggtcgcgcg ggcggccgaa tgcgagccgc gctacgtgcc
     3061 gatgacggtg gtcgatcgca tcgtcgggat caatgccgcg cacgccatcc tcgcggccgt
     3121 tctgcgccgc gaccgcaccg gcgaaggtca atgcgtcgag ttgccgatgt tcgagaccat
     3181 ggcgcaattc gtgctcggcg atcacctcgg cggccgctcg ttcgagccgc cgaccggcga
     3241 cgccggcaac ccccggctgg cgagcgggag ccgccggccc tacgccacgg gtgacggcta
     3301 tgtgtgcgcg ctggtctaca ccgacaagca gtggaaagcg ttcttcgagg gccgcggccg
     3361 tctcgatctg tacgccgctt atccgcattt gatggatttt gcttcgcggc ggcaccactt
     3421 cagcgaagtg caaggcatca tcgcggacgt cttgcgcacg ctgacgacgg tggaggcgct
     3481 ctcactcttc gagcgttgcg atattccctg cgcgccgatg aacgacctcg acgcattgat
     3541 cgacgacccg catctcgctg cggtcgagtt cttccagacc agaacgcatc cgaccgaggg
     3601 gcagatccgc tacaacggca tccccagccg atggaacggc gccgctctga aaatcacgcg
     3661 gcatgcgccg cgcatcggcg agcacagcgt tgccgtgctc aaggaagcgg gcgtgccggc
     3721 tgcggagatt ggcgcgctcc tcgagagcgg tgccacggtc gacggcgggt tggtcgccga
     3781 agccggcgcc gcggcgctgg agccggttgc cgggaaaaat tcgatgccat agtttcgcgg
     3841 cgcgacgacg aac
//
LOCUS       DATMQB010000339         4088 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3555126, whole genome shotgun sequence.
ACCESSION   DATMQB010000339 DATMQB010000000
VERSION     DATMQB010000339.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4088)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4088)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4088
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3555126"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..697
                     /locus_tag="VNY79_09685"
     CDS             <1..697
                     /locus_tag="VNY79_09685"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HWX72760.1"
                     /translation="AQAAARGLVDAGPQRVGGSAFAAVPEVLRSPYLIGVGAWVSLLS
                     FCATIVYFEQANIVSAAVHDRDAQTRLFAGIDLAVNLLSLATQVFVTGQLLKRFGSGL
                     TAGALPAVYIVGFAALFLAPTLAVVVVVQVMQRWMNFAVANPARQVFFTVLEREEKYK
                     AKNLIDVVVYRGSDALYGWVFDSLQALGLKLGAIAFVAWPVAAAWLVLSARLGRAQEH
                     RAALVEAGAAKGS"
     gene            699..1592
                     /locus_tag="VNY79_09690"
     CDS             699..1592
                     /locus_tag="VNY79_09690"
                     /inference="COORDINATES: protein motif:HMM:NF012472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HWX72761.1"
                     /translation="MNIAMTRREFAALAGAVVLASPASAQTGEFMTRAIPGSGERLPA
                     VGLGTAYVFDRNDETTRQKAAAVVQALVGGGGSLIDTSSAYGDAEAVLGEVIAAAALR
                     DKLFIATKLESPDAAELKRSQTRLKTEKLDLLQLHNVRDPQQSLAQFRKWKEQGIWRY
                     IGITSTRHGDFAAVEAILQRDKPDFVQIDYSVDDREAEKRILPLAAEVKCGVLTALPF
                     GRGRLFRAVHGKELPDWAKAFAGSWAQFFLKYLLGDPRVTAVIPGTADPAHMTDNLGA
                     MRGPLPDADQRRRMAEFVASL"
     gene            1654..2847
                     /locus_tag="VNY79_09695"
     CDS             1654..2847
                     /locus_tag="VNY79_09695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX72762.1"
                     /translation="MNKIADARSDDVGPLSNLRSPYFSPEHEMLRAQVRRFVETEIKP
                     KALAWEEQGYVPREVLRRMGSLGFLGIRYPARYGGSEMDTLASVVLAEELGRSTFTGV
                     SYTVLDHTDMASVHVFKSGSEAQKDKWMPRIISGEIITAVAVTEPDAGSDVKGIRTFA
                     RRDGDSYVIDGTKMFITNGVYGDLYCVAAKTDRAGPPSRSMTMFLVEKGTPGFKVSRA
                     LDKHGWRSSDTAELHFDGCRIPAENRLGEEGSGFHAIMRNFQNERTVIGAVAIGEAQT
                     AIDLTLDHVRTRKAFGAPLWQKETIRQRLAMLASKVEAGRQLVHHAAWLDTQGVDATR
                     EVSMVKAYCGELVNEVTYACLQFHGGMGFMRESTIERMARDARAQNIGGGATEVMLEE
                     VAKRL"
     gene            complement(2874..3866)
                     /locus_tag="VNY79_09700"
     CDS             complement(2874..3866)
                     /locus_tag="VNY79_09700"
                     /EC_number="3.5.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015950594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004328 - formamidase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formamidase"
                     /protein_id="HWX72763.1"
                     /translation="MSGLGGLNKAPDGVVIGLVQLQLPTIASKSDLAAQTKKICAMVQ
                     KARKGMTTMDLVVFPEYSLHGLSMDTNAELMSRLDGPEVASFRQACAENRIWGCFSIM
                     EYNPDGNPYNSGIIIDDQGEIRLYYRKMHPWVPVEPWEPGNLGIPVCDGPNGSKIALI
                     ICHDGMFPEMARECAYKGANIMLRTAGYTAPIRHAWQVSNQSNAFSNLMYTANVCMAG
                     TDGVFNSMGEGMIVNFDGVPLVTGNGAPDEIITAEVRPKLADEARRLWGVENNIYQFG
                     HRGYVAVKGGAQDCPYTYMRDLMNGKYRLPWEDEVEITDGSSCGFAIPNRAYQA"
     gene            complement(3935..>4088)
                     /locus_tag="VNY79_09705"
     CDS             complement(3935..>4088)
                     /locus_tag="VNY79_09705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HWX72764.1"
                     /translation="PLVVAVSCNPATFARDASELLRGGYRLTSVTPIDQFRYAAHVEI
                     VARLVK"
BASE COUNT          709 a         1324 c         1306 g          749 t
ORIGIN      
        1 cgcgcaggca gcagcgcgag ggcttgttga cgccggcccg cagcgcgtcg gcggctcggc
       61 ctttgcggcg gtccccgagg tgctccgctc gccttacctc atcggcgtcg gcgcctgggt
      121 cagcctcctc tccttctgcg ccaccatcgt ctatttcgag caggcgaaca tcgtctcggc
      181 ggcagtgcac gatcgcgacg cgcagacgcg cctcttcgcc ggcatcgatc tggcggtgaa
      241 cctgctcagc ctggcgaccc aggtgttcgt taccggccaa ctgctcaagc gtttcggcag
      301 cggcctcacc gccggcgcgc ttccggcggt ctacatcgtc ggctttgccg ccttgttcct
      361 ggcgccgacg ctcgccgtcg ttgtcgtcgt gcaggtgatg cagcgctgga tgaacttcgc
      421 cgtcgccaat ccggcgcggc aggtcttctt caccgttctc gagcgtgaag agaagtacaa
      481 ggcgaagaac ctcatcgatg tggtggtcta tcgcggctcc gatgcgttgt atggatgggt
      541 cttcgacagc ttgcaggcgc tcggcctgaa actcggagcg atcgcgttcg tcgcctggcc
      601 ggtagcggcc gcctggctcg tcctgtcggc gagactagga cgggcgcagg aacatcgcgc
      661 ggcgctggtc gaggccggcg ccgccaaggg aagctgagat gaacatcgcc atgacgcgcc
      721 gcgaatttgc cgcgctcgca ggggcggtgg tgctcgcctc gccggcatcg gcacaaaccg
      781 gcgagttcat gacccgcgcc attccaggga gcggcgagcg gctgccggcg gtggggctcg
      841 gtaccgccta cgtattcgat cgaaacgacg agaccacccg gcagaaagcg gccgctgtcg
      901 tccaggccct ggtcggcggc ggcggaagcc tgatcgatac ctcttcggcc tatggcgatg
      961 ccgaggccgt gttgggcgag gtgatcgcgg ccgcggcgct ccgcgacaag ctgttcatcg
     1021 ccaccaagct tgaatcacct gacgccgcgg agctgaaacg ctcgcagacc cgattgaaga
     1081 cggagaagct cgacctgctg caactccata acgtccgcga tccgcagcaa tcgctggcgc
     1141 agttcaggaa atggaaggag caaggcattt ggcgctacat cggcatcacc tctacccggc
     1201 acggggattt tgccgccgtc gaagcgatat tgcagcgtga caaaccggat ttcgtgcaaa
     1261 tcgattattc ggtcgatgac cgcgaagcgg aaaagcgcat cctgccgctc gccgccgaag
     1321 tgaaatgcgg cgtgctcacc gcacttccgt tcggccgcgg ccggctgttt cgcgccgtgc
     1381 acggcaagga acttcccgat tgggcaaagg cgttcgccgg cagctgggcg cagttctttc
     1441 tcaaatatct cctcggcgac ccgcgggtga ccgcggtgat cccgggcact gccgatccgg
     1501 cgcatatgac cgacaacctt ggcgccatgc gcgggccact ccccgacgcc gaccaacgcc
     1561 gccgcatggc ggagttcgtc gcatcgcttt agctggccga aactcggcta tactcgcgcc
     1621 aatctctgcg tgcgccgcaa ctggaggagc gccatgaaca aaatcgccga tgcaaggtcc
     1681 gatgatgtcg ggccgctctc caatttgcgt tctccatact tctcgccgga gcatgagatg
     1741 ctgcgcgcgc aagtgcgccg cttcgtcgaa accgagatca agccgaaggc gctggcctgg
     1801 gaagagcagg ggtacgtacc gcgcgaagtg ctgcgccgca tgggcagcct gggctttctc
     1861 ggcatccgct acccagcgcg ctatggcgga tcggagatgg acacgctcgc gagcgtcgtg
     1921 ctcgccgaag agctcggccg ctcgacgttt accggcgtct cctacacggt cctcgatcac
     1981 accgacatgg cctcggtgca tgtcttcaag tccgggagcg aagcgcagaa ggacaaatgg
     2041 atgccgcgca tcatttccgg cgagatcatc accgcggtgg cggtgaccga gccggatgcc
     2101 ggctccgatg tgaaaggcat ccgcactttc gcgcggcgcg acggcgacag ctacgtgatc
     2161 gacggcacca aaatgttcat caccaacggc gtctacggcg atctctactg tgtcgccgcc
     2221 aagaccgacc gcgcaggtcc gccgagccgc tcgatgacca tgttcctcgt tgagaagggc
     2281 acgccgggat tcaaggtcag ccgcgctctc gacaagcatg gctggcgttc ctccgacacc
     2341 gcggagctcc atttcgacgg ctgtcgcatt cccgccgaga accggctcgg cgaagaaggc
     2401 agcggcttcc atgcgatcat gaggaacttc cagaacgagc gcaccgtcat cggcgcggtc
     2461 gcgatcggcg aagcgcagac cgcgatcgac cttacgctcg atcacgtccg cacgcgcaag
     2521 gccttcggcg ccccgctttg gcagaaggag acgatccgcc agcgcttggc gatgctggcg
     2581 agcaaagtcg aggcggggcg ccagctcgtc caccacgcgg cctggctcga cacgcagggc
     2641 gtcgacgcca ccagggaagt ctccatggtc aaggcctatt gcggcgagct ggtcaacgag
     2701 gtcacctacg cctgcctgca gtttcacggc ggcatgggct tcatgcgtga gagcacgatc
     2761 gagcgcatgg cgcgcgacgc gcgcgcgcag aacatcggcg gcggcgccac cgaggtcatg
     2821 ctcgaggagg tggcgaagcg gctgtagcgc ttcgctttat cgggcggaag ctcctatgcc
     2881 tgataggccc ggttggggat ggcgaaaccg cagctcgatc cgtcggtgat ctcgacctcg
     2941 tcctcccagg gcagccggta ttttccgttc atcagatcgc gcatgtaggt gtaggggcaa
     3001 tcctgcgcgc cgcctttgac ggcgacgtag ccgcggtgcc cgaactggta gatgttgttc
     3061 tccacgcccc agaggcgccg cgcctcgtcg gcgagcttcg gccgcacctc ggcggtaatg
     3121 atttcgtcgg gcgcgccatt gccggtgacg agcggcacgc cgtcaaaatt gacgatcatg
     3181 ccttcgccca tggagttgaa cacgccgtcg gtgccggcca tgcagacgtt ggccgtatac
     3241 atcaggtttg agaatgcgtt gctctggttg ctgacctgcc aggcgtgccg gatcggcgcg
     3301 gtatagccgg ccgtgcgcaa catgatgttg gcgcccttgt aagcgcactc gcgcgccatc
     3361 tcggggaaca tgccgtcgtg gcagatgatc agcgcgatct tgctgccgtt cgggccatcg
     3421 cacaccggaa tgccgagatt ccccggctcc cagggctcga ccggcaccca cggatgcatc
     3481 ttgcggtaat agagcctgat ctctccctga tcgtcgatga tgatgccgct gttgtaggga
     3541 ttgccgtcgg gattgtactc catgatcgag aagcagcccc agatgcggtt ttcagcacag
     3601 gcctgcctga agcttgccac ctccggccca tcaagccgcg acatgagctc ggcattcgta
     3661 tccatggaga ggccgtgcag cgaatattcg ggaaagacga cgaggtccat cgtggtcatt
     3721 cctttgcgcg ctttctgcac catggcgcaa atcttcttcg tctgcgctgc cagatcactc
     3781 ttgctggcga tcgtcggcag ctgcaactga accaggccga tgaccacgcc gtccggagcc
     3841 ttgttcaatc caccgagccc actcatccac ttctcctgtt cgcttgcggt tcccggcgcg
     3901 tgaatattga cacgtttcgt cggcggacag ccggttattt taccaaccgc gcgacgatct
     3961 cgacgtgcgc cgcgtagcgg aactgatcga tcggcgtgac cgaggtcagc cggtagccgc
     4021 cgcggagaag ttcgctcgcg tcgcgggcga acgtcgcagg attgcatgat accgcgacga
     4081 cgagcggg
//
LOCUS       DATMQB010000340         4336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2011711, whole genome shotgun sequence.
ACCESSION   DATMQB010000340 DATMQB010000000
VERSION     DATMQB010000340.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4336
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2011711"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            239..1852
                     /locus_tag="VNY79_09710"
     CDS             239..1852
                     /locus_tag="VNY79_09710"
                     /EC_number="4.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004612 - phosphoenolpyruvate
                     carboxykinase (ATP) activity [Evidence IEA];
                     GO_process: GO:0006094 - gluconeogenesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate carboxykinase"
                     /protein_id="HWX72765.1"
                     /translation="MKETGLRNGAHGADKFGLNDAATIHWNLPDTVLVEHAVANREGF
                     LVRGGAFCAETGAHTGRSPKDKFVVADGRSEKTVWWEKNGRLSPEKFQLLFDDFIAHA
                     KGKTLFAQDLYGGADAKYRIKTRVYNELAWHSMFIRALLIRPERAELAHYVPDFTILS
                     LPSFKADLKRHGVRSETVIALDFTRRIILIGGTSYAGEMKKSVFTTLNYYLPAESVMP
                     MHCSANVGPAGDVALFFGLSGTGKTTLSADPTRTLIGDDEHGWGPHGVFNFEGGCYAK
                     CIKLSEEAEPEIYATTHRFGTVLENVVFDPDTRICDFDDESRTENTRAAYPLEFIPNA
                     SRTGRAGQPRNIVFLTADAFGVMPPIAKLTPAQAMYHFLSGYTAKVAGTEKGLVGVQP
                     EFSTCFGAPFLPRHPSIYGNLLRELISAHEVDCWLVNTGWTGGIYGVGRRMPIKVTRT
                     LLAAALDGSLKNTKFRTDPYFGFRVPTQLGGVEPHLLYPQKTWQNKLEFDQTARKLVD
                     MFQKNFVQFEDHVDPDVRAAAPEVRIAAE"
     gene            complement(1866..2840)
                     /locus_tag="VNY79_09715"
     CDS             complement(1866..2840)
                     /locus_tag="VNY79_09715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase"
                     /protein_id="HWX72766.1"
                     /translation="MANEKRDVLLIGPSKPAVERGLAGFTVHSLAAAKNREAFFESIG
                     HVRAMAVAAPVERINDPFLARLPGLQIVASFGVGYDHIDANAAARRGIVVTHTPEVLT
                     EEVADTALGLLLCTVRELPQAERHLRGGKWRDGDYPLTRATLRNRIVGLVGMGRIGRA
                     IARRLEAFGVPIAYHTRQPRREVAYRHYPNLVEMARAVDVLVVIVPGGTATRNLIDAK
                     VLDALGPDGILINVARGSVVDEAALIAALKEGKIMAAGLDVFAKEPEVPEELLAMENV
                     VLLPHVGSGSAFTREKMDQLMVDNILAWAEGKPPLTPVPETPWRAWKA"
     gene            complement(2938..3336)
                     /locus_tag="VNY79_09720"
     CDS             complement(2938..3336)
                     /locus_tag="VNY79_09720"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72767.1"
                     /translation="MNKLIVSVVVMFVMALVLSFLVHGVLLNGDYTQLQSWMRPQADV
                     QSLVAYIIVAQALFGAAFAWIYVQGREDKPWLAQGVRYGIAIAALAIAPTYLIYHVVT
                     PVPLVVAIKQIVYDAIRVLLMGVVVAWINR"
     gene            complement(3394..>4336)
                     /locus_tag="VNY79_09725"
     CDS             complement(3394..>4336)
                     /locus_tag="VNY79_09725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HWX72768.1"
                     /translation="TPERNFGPARLSGGVTVTPLARRLAAEAGIDLARVRGSGPRGRI
                     VARDVETTPPSPAAAAPAASAGPSAEQVKALYDPASYEEVMLDAMRHTIAARLLQAKQ
                     TIPHFYVTADVEIDRLKALREEVNAAAPKDRDGAPLFKLSLNDFIIRALALALRRVPA
                     ANAVWAGDRILRFKHADIGVAVALEGGLITPIVRAADTKSVSAISAEMKDLAARARAK
                     KLKPQEYQGGSAAISNLGMYGVREFAAIINPPHATILAVGAARRQAVEKPDGGIGFAS
                     MLTATLSCDHRVVDGTLGAELLAVFRGYVEQPVTALV"
BASE COUNT          755 a         1437 c         1407 g          737 t
ORIGIN      
        1 cggtgaaacc gcgcggttgt ttcggcgtta gggttattgc cgactattgg ttgtagcgtt
       61 tgctgcagcg caatgcggct gggaccaaca atgggcaatc gccttggcaa gtgctatgat
      121 gccgattata cgtcgcgcgc ccacgggcgg cgcgggacgc gtcgtatcag gccgttctcc
      181 tgcggcctca actccaagat taccggccga ccgagccgga cgcgttgcgg aggctagcgt
      241 gaaggaaacg ggtctacgga atggcgccca tggcgccgac aagtttggcc tgaacgacgc
      301 tgcgacgatc cactggaatt tgcctgacac agtcctggtc gagcacgcgg tcgccaatcg
      361 cgaaggcttc ctcgtgcgcg gcggtgcctt ctgcgccgag accggcgccc ataccggccg
      421 cagccccaag gacaagttcg tcgtcgccga cgggcgcagc gagaagacgg tgtggtggga
      481 gaagaacggc cgcctttcgc cggagaagtt tcagctcctg ttcgacgatt tcatcgccca
      541 tgccaagggc aagactctgt ttgcgcagga cctgtacggc ggcgccgacg cgaaataccg
      601 catcaagacc cgagtctaca acgagcttgc ctggcactcg atgttcatcc gcgcgttgct
      661 gatcaggccg gagcgcgctg aactcgccca ctacgtgccc gatttcacca ttctctcgct
      721 cccctcgttc aaggctgacc tcaagcgcca cggcgtgcgc agcgagaccg tgatcgcgct
      781 cgacttcacc cggcgcatca tcctgatcgg cggcacctcc tatgccggcg agatgaaaaa
      841 atcagtgttc accacgctca actactatct gcccgcggag agcgtgatgc cgatgcactg
      901 ctccgccaat gtcggcccgg cgggcgatgt cgcgctgttc ttcggccttt ccggcaccgg
      961 caagacgacg ctgtcggcag acccgacccg caccctgatc ggcgacgacg agcacggctg
     1021 gggcccgcac ggcgtgttca acttcgaggg cggctgctac gccaaatgca tcaagctctc
     1081 ggaagaggcg gagccggaaa tctacgccac cacgcaccgc ttcggcaccg tgctggaaaa
     1141 cgtcgtgttc gatcccgaca cgcgcatctg cgacttcgac gacgaatcaa ggacggagaa
     1201 tacgcgcgcc gcctatccgc tcgagttcat ccccaacgcg tcgcgcaccg gccgtgccgg
     1261 tcagccgcgc aacatcgtgt tccttaccgc cgacgcgttc ggcgtcatgc cgccgatcgc
     1321 caagctcacg ccggcgcagg cgatgtatca tttcctctcc ggctatacgg ccaaggtcgc
     1381 cggcacggag aagggcctgg tcggcgtgca gccggaattc tccacctgct tcggcgcccc
     1441 cttcctgccg cggcatccct cgatctacgg caacctgctg cgcgaactga tcagcgcgca
     1501 cgaggtggat tgctggctgg tcaataccgg ctggaccggc ggcatctacg gcgtcggccg
     1561 ccgcatgccg atcaaggtga cgcgcacgct cttggccgcg gcgctcgacg gctcgctgaa
     1621 gaacacgaag ttccgcaccg atccgtattt cggcttcagg gtgccgaccc agctcggcgg
     1681 cgtcgagccg cacctgctct atccgcagaa gacctggcag aacaagctgg agttcgatca
     1741 gaccgcgcgc aagctcgtcg acatgttcca gaagaacttc gtacagttcg aggaccacgt
     1801 cgatcccgac gtccgcgccg ccgcgccgga agtgcgcatc gccgccgagt agtctcagac
     1861 cggacctatg ccttccaggc gcgccacggc gtctccggga ccggggtgag cggcggcttg
     1921 ccttcggccc aggccaggat gttgtcgacc atgagctgat ccatcttctc gcgggtgaag
     1981 gcagaccccg agccgacgtg cggcaacaga acgacgttct ccatcgcgag cagctcctcc
     2041 ggcacctcgg gctccttagc gaagacgtcg aggccggcgg ccatgatctt tccctccttg
     2101 agcgcggcga tcaaagcggc ttcatcgacg accgaaccgc gggcgacgtt gatgaggatg
     2161 ccatcgggac cgagcgcgtc gagaaccttg gcgtcgatca agttccgggt cgccgtgccg
     2221 cccggcacga tgaccacgag gacatcgacg gcgcgcgcca tctcgacgag gttgggatag
     2281 tggcggtagg cgacctcgcg ccgcggctgg cgcgtatggt aggcaatcgg cacaccgaag
     2341 gcttcgagcc ggcgggcgat agcgcggccg atgcggccca tgccgaccag gccgacgatg
     2401 cggttgcgca gcgtcgcccg ggtcagcgga tagtcgccgt cgcgccattt gccgccgcgc
     2461 agatggcgtt cggcctgcgg cagctcgcgc accgtgcaaa gcagcaggcc cagcgcggta
     2521 tcggccacct cctcggtgag cacttccggc gtgtgcgtca ccacgatgcc gcgccgcgct
     2581 gcggcgttgg catcgatgtg gtcgtaaccg acgccgaagc tggcaacgat ctgcagcccg
     2641 ggcagacggg cgaggaacgg atcgttgatc cgctcgaccg gcgcggccac ggccatcgcc
     2701 cgcacatggc cgatcgattc aaagaatgcc tcgcggttct tcgccgcagc gaggctgtgc
     2761 acggtgaagc ccgcaagccc gcgctcgacg gcgggctttg acggcccgat cagcagtacg
     2821 tcgcgtttct cgtttgccat gtgttgtttg ccatgtgttg tttgccaagt gttgcgtgcc
     2881 aaatattgtt ttgccaagtg ttgcttgcag tgttgtttgc caagtggcgt tcggctgcta
     2941 gcgattgatc caggccacca ccacgcccat cagcaacacg cgaatggcgt cgtagacgat
     3001 ctgcttgatg gcgacgacca gcggcacggg tgtgacgacg tgatagatca gataggtcgg
     3061 cgcgatggcg agcgccgcaa tggcgatacc gtagcggaca ccttgcgcca accaaggctt
     3121 gtcttcgcgc ccctgcacgt agatccacgc gaaggcggcg ccgaacagcg cctgggcaac
     3181 gatgatgtag gccaccaggc tctgtacgtc agcctgcggc cgcatccagc tctgcaactg
     3241 cgtgtagtcg ccgttgagga gcaccccgtg caccaaaaag ctcagcacga gcgccatgac
     3301 gaacatgacc acgaccgaaa caatcaactt gttcatgggc aatctcccct ggattgcgac
     3361 gcgactggaa cctggccggc attccacggc gtgctagact aacgcggtca ccggctgctc
     3421 gacatagccc ctgaagaccg ccagaagctc ggcgcccaac gtgccgtcga ccacgcggtg
     3481 atcgcaggag agcgtcgccg tcagcatgct ggcgaagccg atgccgccgt cgggtttctc
     3541 caccgcctgg cggcgcgcgg cgccgacggc gaggatggtc gcatgcggcg ggttgatgat
     3601 ggcagcgaat tcgcgcacgc cgtacatgcc gagattggag attgccgcag agccgccctg
     3661 gtattcctga ggtttgagct tcttggcgcg cgcgcgcgcc gccagatcct tcatctcggc
     3721 cgagatcgcg ctcaccgact tggtgtcggc ggcgcgcacg atcggcgtta tcagcccgcc
     3781 ctcgagcgcg accgcaacgc cgatgtcggc gtgcttgaag cgcaggatgc ggtcgcccgc
     3841 ccacacggcg ttggcagccg gcacgcgccg taaagcgagc gccagcgcgc ggatgatgaa
     3901 atcgttgagc gaaagcttga acaatggggc gccgtcgcgg tctttcggcg ccgcggcgtt
     3961 gacttcttcg cgcagcgcct tgagacggtc gatctcgaca tcggcggtca cgtagaaatg
     4021 cggaatggtc tgcttcgcct ggagaagccg ggccgcgatg gtgtggcgca tggcgtcgag
     4081 catcacctcc tcgtagctcg ccgggtcgta gagcgccttg acctgttcgg cactcggacc
     4141 tgccgatgcc gccggcgcgg ccgcggccgg ggagggcggc gtggtttcca cgtcgcgcgc
     4201 gacaatgcgg ccacgcgggc cggagccgcg cacgcgagcg agatcgatgc cggcctcggc
     4261 ggcaagccgg cgcgccagcg gggtcaccgt gacgccgccc gagagccgcg ccgggccgaa
     4321 attgcgttcc ggcgtg
//
LOCUS       DATMQB010000341         4571 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3557741, whole genome shotgun sequence.
ACCESSION   DATMQB010000341 DATMQB010000000
VERSION     DATMQB010000341.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4571)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4571)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4571
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3557741"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..262
                     /locus_tag="VNY79_09730"
     CDS             <1..262
                     /locus_tag="VNY79_09730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HWX72769.1"
                     /translation="HIDFLAHGMGLVSHEAPRLTNAGPVPYDNYDAKRPLDAGMVISV
                     ETTLQHPRRGFIKLEDTVAVTANGYEVYGDRARGWNRAGGGA"
     gene            complement(318..542)
                     /locus_tag="VNY79_09735"
     CDS             complement(318..542)
                     /locus_tag="VNY79_09735"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72770.1"
                     /translation="MAYLLPRAIMVLIAWGLTCGLIRKFWPDADPVIFFVAGASWAGA
                     GIAYFAYLRRLKRDIDDLSRRRYSHGHSIG"
     gene            1431..1823
                     /locus_tag="VNY79_09740"
     CDS             1431..1823
                     /locus_tag="VNY79_09740"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72771.1"
                     /translation="MEKSNVGAESAKSSASVVESLTRTKEAIGSAASEAVDSAGSDLD
                     ALVRDLNGLKDTLATFLSKAGNEAMRSARDVSSGLADQGASMAAAAAEGGKSLTAELE
                     SMVRRNPLTSIAAAFVVGIILGRRGRRH"
     gene            1820..3037
                     /locus_tag="VNY79_09745"
     CDS             1820..3037
                     /locus_tag="VNY79_09745"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72772.1"
                     /translation="MTLLLNLLKAFGLDIPARVAELKARIEQRVEDAADQAVHVVQDI
                     AVTVALVCCAAITALAAIAVGLVALARWVADLYGPFAGLAAVGGILLLVTVILAVVAV
                     RRPRSARREVLQSAAKRSATYADAARRLHAAQAEPAQAGGLTSPAASTPQGGAGSSMG
                     DFGKLIGFLLPLLTSAAPASGGGLMGTLSAAWRSGAHRAAGETLEGAAKMVREGDRTN
                     LLAAVGAAVLFGWLVSGRTFSWASRGTDNRSGTMERQKNEFGLGAEGASASAGGQMKD
                     WQRSGAEALSRGKEAASAAGAEAASSGASAVQSLRSEIKNIQDMVTRLAAQSGREAVD
                     SARHAAAAAAERVGDVAGDLARSSADAAAAATDRAKSVAGELEGMARRNPMGVIAGAV
                     VIGVLIGVFGRRS"
     gene            3057..4118
                     /locus_tag="VNY79_09750"
     CDS             3057..4118
                     /locus_tag="VNY79_09750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HWX72773.1"
                     /translation="MTNQDTIQPTLAAHGAARLPAVEVEDYNVELKDEEGFVGDRASK
                     GAFREFIEAWRKPLRELGEDPFGDEPSSEINKKRLDQLLAAGDSEAAGVIHSAIESFA
                     QELAAVTRRFLKLKEWKQVERLVTGGGMAGSRVGELAIGRASVILKAEKVKLDIVTIR
                     NEPDHAGLLGAAHLAPAWIFKGHDAALAADIGGTHIRAGLLALNLKRDPTLAKARVLK
                     HESWRHVDDKPGRDEAVDSLIRMLKRMVKRAEEERLHLAPFIGIGCPGVIMPDGSIER
                     GAQNLPGNWESSRFNLPAALYEAIPRIGDFDTAIVMHNDAVVQGLSEVPFMQDVEKWA
                     VFTIGTGLGNALFTNRHSD"
     gene            4269..4529
                     /locus_tag="VNY79_09755"
     CDS             4269..4529
                     /locus_tag="VNY79_09755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72774.1"
                     /translation="MAQTGEYRIQPELHLRDGRIIRSLGDAMALLREHESRPGIDNRD
                     EVLHGLERAQTDEQRQKAAAGFFAWAMELDLIRRPPKQARRA"
BASE COUNT          833 a         1423 c         1586 g          729 t
ORIGIN      
        1 tcacatcgac tttctcgctc acggcatggg cctcgtcagc cacgaagcgc cgcgcctcac
       61 caatgccggg ccggttccct acgacaatta cgatgcgaaa aggccgctcg atgccggcat
      121 ggtgatttcg gtggaaacca ctctgcagca tccgcgccgc ggcttcatta agctcgagga
      181 tacggtcgcc gtgacggcga acggctacga ggtctatggc gatcgcgccc gcggctggaa
      241 ccgcgccggc ggcggggctt gatccccgct ccgcccgcac aaacgagcgg ttcgccaagt
      301 gagagcgtga cggcggctca gccgatgctg tgcccgtggc tgtaacgccg gcggctgaga
      361 tcgtcgatgt cgcgcttgag ccggcgcaga taggcaaagt acgctattcc cgcaccggcc
      421 catgacgcgc cggcgacgaa gaagatcacc ggatcggcat cgggccagaa tttcctgatg
      481 agcccgcagg ttagtcccca tgcgatcaac accatgatcg ctcgcggcaa caggtaagcc
      541 atgattcgta ctccgacaat ttgcgagaga cgatgcgcca gcgtggttaa agatcgatga
      601 aatcccgccg gcgtggctgc agaaaccgag ttggtgccgc attgcggtcg ccgcgcagcc
      661 cagcgttccg ccctcgcagc ggcacggtct cagtaagggc gccgcgcaga tagccggcaa
      721 acgtcagcac aacaggaatg cgactcagag caggcgccgc ggcgccgatg agacgcagaa
      781 gcgcgctcgc ttggcccaga ttcatcagga agaccgcgag cacgagctgc gaggagcacg
      841 tcgtgcaggt gtgggtcgga ggaatgccgg cgaccgtcga cttttctacc ccggcgtggc
      901 agtaacggca gccgaggcca aaccgccgac gtgatgggcg tgacggaacg gcaaccggtc
      961 gaacgtgatt gtctgatcag tgacgtagtg atgtagttcg atcgcatggt ccaagaggca
     1021 aggccggcaa tggcgaatgg accgagcagc agagtcacca gcgtcgcccg tgcggcgctg
     1081 tcggcatacg gccgaaaaat ctgcggcatc gggcatcctc ctgacaaacc ctgatgccgc
     1141 gagcgcgtgc aggcggcgcc cgccccgcag cacaaccgca gcaatttgga gcaaacccct
     1201 gaccggcgac cgaggaattt tgtcccgggc ggcgcaaaga ccacgttcca ccgcgggaac
     1261 tgcggcctga tcggcacgtt agcctgttgc attcgcgcgt aagcacggac ttcgaggcgg
     1321 cggtcttaag ctcctggagc gctcattggg cggttttgtc gcggccgcgc gtcggttgtc
     1381 ggccgtgagc gctgtcgctc acttgcgcgt tcaaagttca aaggtgaaac atggaaaaga
     1441 gcaatgtcgg cgcggaaagt gccaagtcga gcgcgtcagt cgtggaatcg ctgacacgaa
     1501 ccaaggaggc gattggcagc gccgccagcg aggccgtgga ctcggccgga tcagaccttg
     1561 acgcgctcgt tcgtgatctc aacggcctca aggacacgct cgcgaccttc ctgtcgaagg
     1621 ccggcaacga agcgatgcga tccgcgcgcg atgtgtcctc cggcctcgcc gaccagggcg
     1681 ccagcatggc cgccgccgct gctgaaggcg gcaaaagcct gaccgcagaa cttgagagca
     1741 tggtcagacg caacccgctg acgtccattg ccgccgcgtt cgtcgtcggc atcattctcg
     1801 gccggcgggg gcggcgacat tgacgctctt gcttaatctg ctcaaggcct tcggtctcga
     1861 cattcctgcc cgcgttgccg aattgaaggc acgcatcgag caacgggtgg aggacgcggc
     1921 cgatcaggcg gtgcacgtcg tgcaggacat cgccgtgacg gtggcgctcg tctgctgtgc
     1981 cgcaatcacc gcgcttgccg caatcgcggt gggactggtc gcgctggcgc ggtgggttgc
     2041 agatctttac ggcccgttcg ctgggctcgc cgcggtcggc ggcattctgc ttctggtgac
     2101 agtgatcctt gccgtcgtgg cggtgaggcg gccgcggtcg gcgcggcgcg aggttctgca
     2161 gtcggcggcc aagcggtcgg cgacctatgc cgacgccgcg cggcggttgc acgccgcaca
     2221 agccgaacct gcgcaggctg gtgggctgac gtcacccgcc gcgtcgacgc ctcaaggcgg
     2281 cgcgggctcg tcgatgggtg atttcggcaa gctgattggc ttcctgttgc cgttgctgac
     2341 cagtgcggcg ccggcgagcg gaggcggcct catgggcacc ttgagcgcgg cctggcgctc
     2401 aggcgcgcat cgggcggccg gcgagacgtt ggagggcgca gcgaaaatgg tccgcgaagg
     2461 cgatcgcacc aacctgctcg cggcagtagg cgcagcggtg ttgttcggct ggctggtgag
     2521 cggacgaacg ttttcgtggg cgtcgcgtgg aacagacaac aggagcggaa caatggaacg
     2581 gcagaagaat gaattcggtc tgggggcgga aggcgcgtcg gcttccgccg gtggccagat
     2641 gaaggactgg cagcgcagcg gtgcggaggc gttgtcgcgc ggcaaggaag cggcgagcgc
     2701 ggccggcgcg gaggcagcga gttcgggtgc ctcggcggtg cagtccctgc gcagcgagat
     2761 caagaatatt caggacatgg tgacccggct cgcggcgcaa tcgggccgtg aggccgtcga
     2821 ttccgcacgc catgccgctg cggctgccgc cgagcgggtc ggcgatgtcg ccggcgacct
     2881 cgcccgcagc agcgccgacg ccgccgcggc ggcgaccgac cgggcaaagt cggtcgccgg
     2941 cgagcttgag ggcatggcgc ggcgcaatcc aatgggcgtc atcgccgggg cggtcgtgat
     3001 cggcgtgctg atcggggttt tcggacgcag aagctgacgt cgccagtcgg ggccgcatga
     3061 ccaaccaaga taccatccag ccgacattgg ccgcgcacgg cgccgctcgg ttgccggcgg
     3121 tcgaggtcga ggactacaac gtcgagctca aggacgagga aggtttcgtc ggcgaccgcg
     3181 ccagcaaggg agcctttcgc gagttcatcg aagcctggcg caagccgctt cgcgagctcg
     3241 gcgaggatcc gttcggcgac gagcccagca gcgagatcaa caagaagcgc ctcgatcaac
     3301 tcctggcggc tggcgattcc gaggcggcgg gcgtcatcca cagcgcgatc gaaagcttcg
     3361 cgcaagagct tgccgctgtc acccggcgct ttctcaagct caaagagtgg aagcaggtcg
     3421 agcggctggt gacgggcggg ggcatggcgg gaagccgcgt cggcgagctc gcgatcggcc
     3481 gcgcctcggt cattctcaag gccgagaagg tcaagcttga catcgtcacc atccgcaacg
     3541 aacccgatca tgccggtctg ctcggcgcgg cgcatctcgc gcctgcctgg atcttcaagg
     3601 gccacgacgc ggcgctcgcg gcggatatcg gcggcacgca tatccgcgcc ggcctgctgg
     3661 cgctgaacct gaagcgcgat cctactctcg cgaaggcgag ggtgctcaag catgaatcgt
     3721 ggcgccacgt ggacgacaag ccgggccgcg acgaagccgt cgacagcctg atccgcatgc
     3781 tcaagcggat ggtcaagcgc gcggaggagg agcgtctgca cctcgctccg ttcatcggca
     3841 tcggatgtcc gggcgtgatc atgcccgacg gctcgatcga gcgcggggcg cagaatcttc
     3901 cgggcaactg ggaaagcagc cgcttcaatc tgccggcggc cctgtacgaa gcgataccca
     3961 ggatcggtga cttcgacacc gccatcgtca tgcacaatga cgcggtggtg cagggtctca
     4021 gcgaagttcc gttcatgcag gacgtcgaga aatgggccgt gttcaccatc ggcaccggtc
     4081 tcggcaacgc gctattcacc aacaggcata gcgattagcc cggcaattcc gcttcactgg
     4141 tgacgaagcg cgcaatcgcc ctgcgcaatg cttgcatctt gaattcgcat gtggggagcg
     4201 gaacctcatt tgagcgtagg cattgggact cctgagcaag acgcgaggac acggaacggt
     4261 cgcttcgaat ggcgcagacg ggcgaatatc gcatacagcc ggagctgcat ctgcgtgacg
     4321 gtcgtatcat ccgctcgctc ggtgacgcga tggcgctgct gcgcgaacac gagagccgtc
     4381 ccggcatcga caatcgcgac gaggttcttc acgggctgga gcgcgcgcag accgacgagc
     4441 aacgccagaa ggcggccgca ggtttctttg cctgggccat ggaactcgac ctcattcgtc
     4501 gtccgccgaa gcaggcgcgg cgcgcgtagc gagggcggcg cgcggacgcc gtcaggtgtc
     4561 gataccgctg g
//
LOCUS       DATMQB010000342         3497 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1690938, whole genome shotgun sequence.
ACCESSION   DATMQB010000342 DATMQB010000000
VERSION     DATMQB010000342.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3497)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3497)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3497
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1690938"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1610)
                     /locus_tag="VNY79_09760"
     CDS             complement(<1..1610)
                     /locus_tag="VNY79_09760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010970341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HWX72775.1"
                     /translation="MSQTETTSVERRLAAILAADVVGYSRLMEVDEAGTLARLKTIRL
                     ELIDPAIAKCKGRIIKTTGDGMLVEFQSVTEALRCAVDFQERMARRNRDMPASRILVY
                     RIGLNLGDVIAEGDDIFGDGVNIAARLESIAEPGGICISAAVRDQVGDRLEVAYQDLG
                     EQQVKNISRPIRIFKVVLNGDAAAASDPASARPAAAAPAASPRKPSIAVLPFANMSGD
                     SEQEFFADGLTEDIITELSRFRELLVISRNAVFVHKGKPVKAQEIAREFGVEYVVEGS
                     VRKAADRVRVTVQLIDGETETHVWAERYDRKLADIFEIQDEVTSSIAATLFGRVEAAR
                     HDRVQRKRTDNMAAYEYVLTGKVLHHWSNREANAQALLMLDRAIELDPNYAHAHAWKA
                     CATGQAWLHGWCENRDATLEVILGALQTALSLDDNDADVHRILAALKLNFNEHDKAAY
                     HQERALSLNPNSDLIVVQQGELLTWLGRPAEGIEWIRRAMRLNPYHPERFWSHLGRAQ
                     YTARLYADAIESFSKLTAPDHTHHAFLAA"
     gene            complement(1877..3352)
                     /locus_tag="VNY79_09765"
     CDS             complement(1877..3352)
                     /locus_tag="VNY79_09765"
                     /inference="COORDINATES: protein motif:HMM:NF013584.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HWX72776.1"
                     /translation="MPASSVPPASPLQSAADLPLARQTARELARLIRTRAVSPVEVLD
                     AHLKVIEQINPKLNAIVTLATDQALDAARRAESAVMKGEPLGPLHGLPVAIKDVTPTA
                     GIRTTFASPLYQDHVPVEDAEVVRRLKAAGAIVLAKTNTPEFACGAHTDSALFGPARN
                     PWNPDLSPAGSSGGSAVAVATGMVPIAQGTDFGGSVRVPAAFCGIVGLRPTPGLTPSY
                     PMPLAWNQGQLHGPLARDAEDAALMLDAIAGASPLSPISVAAPWASALAELERRGDAK
                     ALRVAYVADIAGIGVEPEIASICRDAALALRAAGARVEEIEFDASDGRGPYQTWRGLW
                     MVGQQYERLARIGEFGSNLKSSVEAGLKLTALDLAAAEQKRQEIFHRFRELFERFDVL
                     LTPAAPVKPFPVAMNFPDRINGRALENYIDWIAPAYLITLVSLPAATAPTGLTRDQLP
                     VGMQVVAPRFEEPLILNVARLIHRASGVGWPPAARTAAVPR"
     gene            complement(3339..3488)
                     /locus_tag="VNY79_09770"
     CDS             complement(3339..3488)
                     /locus_tag="VNY79_09770"
                     /inference="COORDINATES: protein motif:HMM:NF021200.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ring-opening amidohydrolase"
                     /protein_id="HWX72777.1"
                     /translation="MPWHRHSKGAVGGVAAAAIGDPAVFVSVDAMHQGPQGGGPCIAI
                     VDAGE"
BASE COUNT          551 a         1152 c         1196 g          598 t
ORIGIN      
        1 gcggcgagaa aggcatgatg ggtgtgatcc ggcgccgtca gcttgctgaa cgattcgatg
       61 gcgtcggcat agagacgcgc ggtgtattgc gcccggccga gatgactcca gaagcgctcc
      121 ggatgataag ggttgagccg catcgcgcgg cggatccact cgataccctc ggccgggcgg
      181 ccgagccagg tcagcagctc accctgttgc acgacgatga ggtcgctgtt cggattgagg
      241 ctcagcgcgc gttcctgatg ataggccgcc ttgtcgtgct cgttgaagtt cagcttcagg
      301 gccgcaagga tccgatgcac gtcggcgtcg ttgtcgtcga gcgagagcgc ggtttgcagc
      361 gcgcccaata tcacctccag cgtggcgtcg cggttctcgc accagccgtg cagccacgcc
      421 tggccggtcg cgcacgcctt ccaggcgtgc gcatgcgcgt agttcgggtc cagctcgatg
      481 gcgcgatcga gcatgaggag cgcctgggcg ttggcttcgc gattggacca atggtgcagg
      541 accttgccgg tcagcacata ctcgtacgcc gccatgttgt cggtgcgctt gcgctgcacg
      601 cggtcgtgcc tcgcggcctc gacgcggccg aacagcgtcg ccgcgatcga ggaggtgacc
      661 tcatcctgga tctcgaagat gtccgcgagc tttcgatcgt aacgttcggc ccagacgtgc
      721 gtctcggttt cgccgtcgat aagctgaaca gtcaccctga cgcgatccgc cgccttgcgc
      781 acgcttccct cgaccacgta ctcgacgccg aattcgcggg caatctcctg cgccttcacc
      841 ggcttgccct tgtgcacgaa aaccgcgttg cgcgagatga cgaggagctc gcggaagcgc
      901 gacagctcgg tgataatgtc ctcggtcagc ccgtcggcaa agaactcctg ctccgaatcg
      961 ccgctcatgt tggcgaaggg cagcaccgcg atcgacggct tgcgcgggct cgccgcgggc
     1021 gctgccgccg ccggtcgagc ggaggcggga tcgctcgccg ccgcggcgtc gccgttgagc
     1081 acgaccttga agatacggat cggccggctg atgttcttga cctgctgctc gccgagatcc
     1141 tggtaggcga cctcgagccg atcgccgacc tgatcgcgca ccgccgcgga aatgcagatg
     1201 ccgcccggtt ccgctatcga ttcgagccgc gcggcaatgt tgacgccgtc gccaaagata
     1261 tcgtctccct ccgcaatcac gtcaccgaga ttgaggccga tgcggtagac caggatccgc
     1321 gacgccggca tgtcacggtt gcgccgcgcc atgcgctcct gaaagtccac ggcacagcgc
     1381 agcgcttcgg tgacgctttg gaattccacc agcatgccgt caccggtggt cttgatgatg
     1441 cggcccttgc atttggcgat cgccgggtcg atcagctcca ggcgtatcgt cttcagtcgt
     1501 gcgagagtcc ccgcttcatc gacttccatg agccggctgt agccgacgac atccgccgcg
     1561 aggatggcgg ccagccggcg ttctacgctc gtcgtttccg tctggctcat ggcccgcttc
     1621 gaatgggtct cgggtcgatg cccttgtcag cggtaaaatc tacgcggagg caatgccgga
     1681 ggtcgatttg atcggctgac ataacggcgc tcgccttttg gccggattgt gatccggagg
     1741 ccggaattga cgacatttcg gcgcagtccc ctagatagta ggcgggcaag ctcgtcgcca
     1801 tatcgggcct ggcgggcgcg tgccacgcga gcgggccaac gagcggcgcc gggcggcgcc
     1861 ggggaggttt tcggcttcag cgcggaactg ccgccgtccg cgccgccggt ggccagccga
     1921 cgccgctcgc gcgatgaatg agccgcgcga cgttcagaat cagcggctcc tcgaaacgcg
     1981 gcgctacgac ctgcatgccg accggcaact ggtcccgggt caagccggtg ggcgcggtcg
     2041 cggccggcag gctgacgagc gtgatcaggt aggcgggcgc gatccagtcg atgtagttct
     2101 caagggcgcg gccgttgatg cggtccggga agttcattgc caccgggaag ggctttaccg
     2161 gcgccgcagg cgtaagcagc acgtcgaaac gttcgaacag ttcgcgaaag cgatggaaaa
     2221 tttcctgccg tttctgctcg gccgcggcaa gatcgagggc cgtcaatttc agcccggctt
     2281 cgacactgct tttgagattg ctgccgaact cgccgatgcg ggcaagccgc tcgtattgct
     2341 gcccgaccat ccagagaccg cgccaggtct gataaggacc gcggccgtcg ctggcgtcga
     2401 attcgatttc ctccacccgc gcgccggcag cgcgcagcgc cagcgccgcg tcgcggcaga
     2461 tcgaggcgat ctccggctcg acgccgatcc cggcaatgtc ggcaacgtag gcgacgcgca
     2521 gggctttggc gtcgccgcgc cgttcaagct cggcgagcgc gcttgcccac ggcgccgcga
     2581 ccgagatcgg cgacagcggg ctcgcgccgg cgatcgcgtc gagcatgagt gcggcgtctt
     2641 cggcgtcgcg cgccaaggga ccgtgaagct ggccctggtt ccaggcaagc ggcatcggat
     2701 agctcggcgt caggcctggc gtcggccgca gcccgacgat gccgcaaaac gccgcgggga
     2761 cgcggaccga gccgccgaaa tcggtgcctt gcgcgatcgg caccatgccg gtcgcaaccg
     2821 cgacggccga gccgccggac gatcccgccg gactcaagtc cggattccac ggattgcgcg
     2881 ccggcccgaa cagcgcgctg tcggtatgcg ccccgcaggc gaattcgggc gtgttggtct
     2941 tggcaagcac gatggcgccg gcggccttga gccggcgtac cacttccgca tcctccaccg
     3001 gcacgtgatc ctggtagagc ggcgaggcga atgtggtgcg gatgccggcc gtcggcgtca
     3061 cgtccttgat cgcgaccggc aggccgtgca gcggaccgag cggctcgccc ttcatgacgg
     3121 cgctttcagc gcgccgcgcc gcgtcgagcg cctggtctgt ggcgagggtc acgatcgcgt
     3181 tgagcttggg attgatctgc tcgatcacct tgaggtgcgc atcaagcacc tcgaccgggc
     3241 tgacggcgcg ggtgcgaatg agccgcgcca gctcgcgcgc cgtttggcgc gcgagcggaa
     3301 ggtccgccgc ggactgcagc ggcgatgccg gtggcacgct actcgccggc atcgacgatg
     3361 gcgatgcacg gtccgccgcc ctgcgggccc tgatgcatgg catcgacgga gacgaatacg
     3421 gcgggatcgc cgatcgccgc ggcggcaacg ccgccgaccg cgcccttgga atggcgatgc
     3481 cagggcacat cggaatc
//
LOCUS       DATMQB010000343         3788 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_143437, whole genome shotgun sequence.
ACCESSION   DATMQB010000343 DATMQB010000000
VERSION     DATMQB010000343.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3788)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3788)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3788
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_143437"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(394..1779)
                     /locus_tag="VNY79_09775"
     CDS             complement(394..1779)
                     /locus_tag="VNY79_09775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010684648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HWX72778.1"
                     /translation="MATDSAVTVAARLDRLPASRHTLKLITLLSLGGWFEFYDLFFTA
                     YVAPGMFKAGLFKPTTQGLFDLHGFASFVAAGFAGMFIGTLAFSWVSDRFGRRSIFTF
                     ALLWYSIGALVMAFQTTPESIVLWRLIAGIGLGVELVNIDAYVSELVPKEQRGPAFAY
                     NQFVMYTAVPVIAFLAWHLVPRTIFGLDGWRWVVIIGSIGALIIWWIRRGLPESPRWL
                     AQHGRIAEAERIVEDFERRSRAETGAELPAPQLVAGEAERKPGTWMEMWSPVYRGRTV
                     MLVVFHLFQTIGYYGFSSWVVTLLLSQGIEVTKSLAYTFIIAMAAPVGPLVGVYFADR
                     FERKWQVACSVLGIAVFGLLFSQRTTALGVIACGLLITLCGNWFSFSFHAYQAELYPT
                     RIRAQAVGFVYSWSRFSAIFSGFLIAFFLGRYGTIGVFSFIAGAMVIVFIVISLFGPA
                     VTRRRLEAIAA"
     gene            1906..2532
                     /locus_tag="VNY79_09780"
     CDS             1906..2532
                     /locus_tag="VNY79_09780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020184632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarC family protein"
                     /protein_id="HWX72779.1"
                     /translation="MPLDFAVSGLLTLFVVVDPVGLTPTFLVVTDGLPRAARRSVALR
                     ASVIAGVILAGAALLGEWLFRTLGISLAAFRIAGGLLLFSIAFEMLFGVRIRREGEAA
                     EQAVEEHVRNVAAFPLAIPLMAGPGAITAAVLLAGRAGGDLLLTVLVVADVVLVAAAC
                     FVAFLFAAQIGRLLGLTGNIVLSRLLGVLLAALAVQYVVDGVRSILGG"
     gene            complement(2622..3098)
                     /locus_tag="VNY79_09785"
     CDS             complement(2622..3098)
                     /locus_tag="VNY79_09785"
                     /inference="COORDINATES: protein motif:HMM:NF021538.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2269 domain-containing protein"
                     /protein_id="HWX72780.1"
                     /translation="MINLIFAIKFVHVVAAAAMFGTALGLAAFMLLADRSGNASVIAV
                     TSRFAIGVETMVMIPALALQPISGFPLVSTIGLSFGEFWIVLSLLVYVLVVAGWLAVL
                     LLEIRIRDLTKEAALNQKPLPDAYHVMFRLYTMLVWPTMAGMLVVFALMIWQPRFS"
     gene            complement(3336..>3788)
                     /gene="ssb"
                     /locus_tag="VNY79_09790"
     CDS             complement(3336..>3788)
                     /gene="ssb"
                     /locus_tag="VNY79_09790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003697 - single-stranded DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HWX72781.1"
                     /translation="PEIRRTQDGRPVANLRLATSDSWKDKATGERREKTEWHRVVIFN
                     ENLCRIAEQYLKKGSKVYIEGQLQTRKWQDQSGQDRYSTEVVLQGFRGELTLLDRSGS
                     AGAGGGGDFGTDDTGEFGSPGPSRKVAAAGVGARNGTPRADMDDEIPF"
BASE COUNT          687 a         1247 c         1253 g          601 t
ORIGIN      
        1 cctcggccgc ggagagcgcg cgcaccgggg aatgatagcc gtgctcatgg tagtgccgga
       61 tcgcctccgc ggaaagtgac gtcatggccg cttccacccc atctagaatt cgttgttgat
      121 ccgagctgag gccatgcgtg gggaggtgtc agattctccc gatgaccggc caatgcgctc
      181 ggcgtgggga caggttagcc ctgcttcaag tgacgtgcaa caattggccg accattagat
      241 cgccgagaag ccgcctgaga cggcatttcc ggcgcactgg cttgacatca attcatccgg
      301 caagtccgct catccggcat gtccgccggc ggcttctgtc acggcttggt aagattggat
      361 cggcggtatg ccgcagggct ctcgcggtat gcgctacgcc gcgatcgctt cgaggcggcg
      421 ccgcgtgacc gccgggccga acaagctgat aacgatgaac acgatcacca tcgcgccggc
      481 gatgaagctg aacacgccga ttgtgccgta gcggccgagg aagaaagcaa tcaggaagcc
      541 ggagaagatg gcgctgaacc ggctccagga atagacaaag cccacggcct gggcgcggat
      601 gcgggtcgga tagagctcgg cctggtaggc gtggaacgaa aacgagaacc agttgccgca
      661 tagcgtgatc agaaggccgc aggcgatcac gccaagggcc gttgtccgct gtgagaacag
      721 caggccgaac acggcgatgc cgagaacgga gcaagccacc tgccatttgc gctcgaagcg
      781 gtcggcgaaa tagacgccga ccagcggccc gaccggcgcg gccatggcga tgatgaaagt
      841 ataggcgagc gatttcgtga cctcgatgcc ctgcgacagg agcagcgtaa cgacccagct
      901 cgagaagccg taatagccga tggtctgaaa cagatggaag accaccagca tgacggtgcg
      961 gccgcggtag acagggctcc acatttccat ccaggtgccg ggcttgcgct cggcctcgcc
     1021 ggcgacaagc tgcggcgccg gcagctcggc cccggtttcg gcgcggctgc ggcgctcgaa
     1081 atcctcgacg atgcgctccg cttcggcgat gcggccatgc tgcgccagcc agcgcggcga
     1141 ttcgggcagc ccgcggcgga tccaccagat gatgagcgcg ccgatcgaac cgatgatcac
     1201 gacccagcgc cagccgtcga ggccgaatat cgtgcgcggc accagatgcc aggccaggaa
     1261 cgcgatgacc ggcacggccg tatacatgac gaactggttg taggcgaagg cgggcccgcg
     1321 ctgctccttc ggcaccagct cggacacata ggcgtcgatg ttgacgagct caacgccaag
     1381 gccgatgccg gcgataagcc gccacaggac gatcgactcc ggggtcgtct gaaacgccat
     1441 gaccagcgcg ccgatcgagt accagagaag cgcgaaggtg aagatcgagc ggcggccaaa
     1501 gcggtcggag acccagctga aggcgagcgt gccgatgaac atcccggcaa agcccgcggc
     1561 cacgaaactg gcgaagccgt gcaggtcgaa caacccttga gtcgtcggct tgaacaggcc
     1621 ggccttgaac attcccggcg ccacataggc agtgaagaac aggtcgtaga attcgaacca
     1681 gccgccgagc gaaagaagcg tgatcagctt caaagtgtgg cgcgacgccg gcaggcgatc
     1741 gaggcgcgcc gccaccgtca ctgcgctgtc cgtcgccatt tggtttgccc tcccctcgcg
     1801 gccgttccgc ggcgctgacg gccctgcgcg ttcccccggg cttttctcga acctttcgca
     1861 tccgcgcaca agaccggcgc ccgcgatgct ggcacaatgc ccgccatgcc gctcgatttc
     1921 gccgtctcgg ggctgctgac cctttttgtc gtggtcgacc cggtcgggct gacgccgacc
     1981 tttctggtcg tgaccgacgg actgccgcgc gccgcccggc gcagcgtcgc gctccgcgcc
     2041 agcgtcattg ccggcgtgat cctcgccggc gcggcgctgc ttggcgaatg gctgtttcgc
     2101 acactcggca tttcgctcgc cgcgttccgc atagccggcg ggctgctgct gttctcgatc
     2161 gccttcgaaa tgctgttcgg cgtgcgtatc cgccgcgagg gcgaggcagc ggaacaggcc
     2221 gtcgaggagc acgtgcgcaa cgtcgccgcc ttcccgctgg cgatcccgct gatggccgga
     2281 cccggcgcga tcacggcggc ggtgttgctc gccggccgcg ccggcggcga cctgctgctg
     2341 acggttctgg ttgttgccga cgtggtcctg gtcgcggccg cgtgtttcgt cgccttcctt
     2401 ttcgccgcgc agatcggccg gctgctcggc ctcaccggca atatcgtgct gtcgcgcctg
     2461 ctcggcgtgc tgctcgccgc actcgcggtg caatacgtcg tcgacggcgt gcgctcgatc
     2521 ctcggcggct gagcagcgat atcgccagtc cagcgctcgc caccctggcc gaacgcgacg
     2581 ccgacacacg cgaacgcctg gcgctcgccg gctgaggacc gtcaggaaaa gcgcggctgc
     2641 cagatcatca gggcgaagac caccagcatg ccggccatcg tcggccagac cagcatggtg
     2701 tagaggcgga acatgacgtg ataagcgtcc ggcagcggct tctggttgag cgccgcctcc
     2761 ttggtcagat cccggatgcg gatctcgagg agcaggacgg caagccagcc ggcgacgacg
     2821 agcacataca ccagcagcga aagcacgatc cagaattcgc cgaacgaaag gccgatcgtc
     2881 gagaccagcg gaaatccgct gatcggctgc aacgccaggg cggggatcat caccatcgtc
     2941 tcgacgccga tcgcaaagcg cgacgtcacc gcaatgacgg aggcgttgcc ggagcgatcg
     3001 gcgagcagca tgaacgcggc gaggccgagc gcggtcccga acatcgcggc agcggcgacc
     3061 acgtgaacga acttgatcgc gaagatcagg ttgatcatcg gcgccgaggc ggccgccgca
     3121 cgtccccgac gagcccgcaa gcccgaccgg ctgtctcgag caatttgcag gggctcgacg
     3181 gcgattggac ggatttccga atgcgcgttg ccggcatgcg catcgggtcc ctcagtggcc
     3241 caagacgacg gcgtgcatga tgcggccgga caattcacgc cgcgcgtgca aaaaatgacc
     3301 gttcgttccg ctcgccgcga cagcttgcga cgccgtcaaa acggaatctc gtcgtccatg
     3361 tcggcgcgcg gggtgccgtt gcgcgctccg acgccggcgg cggcgacctt gcggcttggt
     3421 ccgggcgagc cgaattcgcc ggtatcgtcg gtgccgaaat caccgccgcc tccggcgccg
     3481 gcgctgccgg agcggtcgag caaggtcagc tcgccgcgga agccctggag caccacctcg
     3541 gtcgagtagc ggtcctggcc cgactggtcc tgccatttgc gcgtctgcaa ctggccctcg
     3601 atgtaaacct tcgagccctt cttaagatac tgctcggcga tccggcacag attctcattg
     3661 aagatgacga cgcggtgcca ctcggtcttt tcccgccgct cgccggtcgc cttgtccttc
     3721 caggaatccg acgtggcgag gcgcagattg gccaccggcc gaccgtcctg ggtgcgacga
     3781 atttccgg
//
LOCUS       DATMQB010000344         3289 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2313023, whole genome shotgun sequence.
ACCESSION   DATMQB010000344 DATMQB010000000
VERSION     DATMQB010000344.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3289)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3289)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3289
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2313023"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..771
                     /locus_tag="VNY79_09795"
     CDS             <1..771
                     /locus_tag="VNY79_09795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020091907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX72782.1"
                     /translation="VNLAHGAFYAIGAYLTVVLSPTIGFGGSIVASPILVGILGVIIE
                     RTLFRRFYKADPSLSLILTFGLAMVAEQALRMIFGAPPLSYSIPQELRGQLFIGSFIY
                     PYYRVLLLAVAAACIAGLWFLLQRTAFGRVVRAGVQNPDMVGALGISLEPYMAAVALL
                     GVGLAGLAGVMLAPIFSIHPAMGSEIITAAFVVVVIGGLGSFWGVVVAAMIVGLVKGL
                     VVALGYPQFSEAAMYVLMLFVLLVRPRGLFGERIQRFE"
     gene            780..>3289
                     /locus_tag="VNY79_09800"
     CDS             780..>3289
                     /locus_tag="VNY79_09800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008134825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     ATP-binding protein/permease"
                     /protein_id="HWX72783.1"
                     /translation="MPQARDLLTAAAALAVLPFALASIGLGVTSATEVVVFAIACMAL
                     NILVGCTGLTSFGHGAWFGLAAYGAGLAQLNLFPGSILLPIGVGLAVVALASLVFGYM
                     ILRRRGVYFALLTLALAAMLYTIAFRWTEVTGGENGLGGITRPVIAGLSFDTSLPFYT
                     LVASIGFAVVYVLWRFHRSPVGHVLVAIRENETRVRFIGYQASHYKLLAFVVSATITG
                     LAGTLLLFNNRMTSADPISVAFSGELLVMVIIGGMRSFLGPALGALFFVIFRDYLSSI
                     TEDWLLYFGLLFVAFIVFSPTGLVGLGERLLAPFKTATVEDAAMASRQAGAIELPAFL
                     KPKDHRDGAILEVEGIAKSFGGIKAVQDVSFSVKDRTLHALIGPNGAGKTTAFNLISG
                     MYTPDAGSVTLDGRAVGGLTPGAITQAGVGRSFQITNLFPSLTVAENVRLAVQSRDRK
                     RFGFWTAAKDLEQVNSEATEMIRTMGLAGIERAEAGSLSYGGQRLLDMALALATRPRI
                     LLLDEPLAGLAAAERERVGRLIKQISIDMPVLLVEHDIDRVFQLADAVTVMNDGHVLV
                     DGTVEDARSSPSVQEVYIGSGTHALAGKSRPSAAQPQSLLTLEGVNTLYGKSHILHDV
                     AFDVHENEIVALLGRNGAGKSTVLKTIVGIAPPARGTIALAAEQLAGRPSAEITRRGI
                     SYVPQGRGLFAGMSVAQNMELGRLRRRNGAGVYWDEDKIFTFFPRIKERWRSPADYLS
                     GGEQQMVAVARALSGNTRILLLDEPFEGLAPAVVEELFEAFDKLRREISILIVDHHLD
                     LALALSDRTVALERGQVAYMGPSKALSEDLDLRRKVLWL"
BASE COUNT          472 a         1111 c         1043 g          663 t
ORIGIN      
        1 gtcaatctcg cccacggcgc gttctatgcg atcggcgcct acctgacggt cgtgctctcc
       61 ccgacgattg gcttcggcgg gtcgatcgtc gcctcgccga tactggtcgg catcctcggg
      121 gtgatcatcg agcgcacatt attccgccgc ttctacaagg ccgatccgag tctgtcgtta
      181 attctgacat tcggcctcgc gatggtcgcg gagcaggcgc tgcgtatgat cttcggcgca
      241 ccgccgcttt cctactccat cccgcaggag ctccggggcc agctgttcat cggcagcttc
      301 atttatccgt attatcgggt gttgttgctc gcggtcgcgg ccgcctgcat cgcgggcctc
      361 tggttcctgc tgcagcggac cgcgttcgga cgcgtcgtgc gcgccggcgt gcagaacccc
      421 gacatggtcg gcgcgctggg catctccctc gagccctaca tggcggcggt ggcgctcctc
      481 ggcgtcggac tcgcaggcct tgccggcgtc atgctcgcgc cgatcttctc gatccacccg
      541 gccatgggca gtgagatcat aacggcggcc ttcgtcgtgg tcgttatcgg cggcctggga
      601 tcgttctggg gcgtcgtggt ggctgcgatg atcgtcgggt tggtgaaagg cctggtcgtc
      661 gccttaggct atccgcaatt ctcggaggcc gcgatgtatg tgttgatgct attcgtgctg
      721 ctggtcaggc cgcgcggtct gttcggcgag cgcattcaac ggttcgagtg aggtgcgcga
      781 tgccgcaagc acgtgatctc ctcactgccg cggccgcgct ggcagtcctg ccgtttgcac
      841 tggcgtcgat cgggctcggc gtcacctcgg cgaccgaggt cgttgtgttc gcaatcgcct
      901 gcatggcgct caatatcctg gtgggctgca ccggcctcac ctcgttcggc cacggcgcct
      961 ggttcgggct ggccgcctat ggggcgggac tagctcagct gaacctgttt cctggctcga
     1021 tcctgcttcc gatcggcgtg ggcctcgccg tcgtcgccct cgcttcgctc gtgttcggct
     1081 atatgattct gcgccggcgc ggtgtctact tcgcgctgct gacgctggcg ctggccgcga
     1141 tgctctatac gatcgcattc cggtggacgg aggtcaccgg gggagagaac ggtctcggcg
     1201 gcatcacgcg gccggtgatc gccggcctct ccttcgatac ctcgttgccg ttctatacgc
     1261 tcgtcgcgtc gatcggtttc gccgtcgttt atgtactctg gcgcttccac cgctccccgg
     1321 tcggccacgt gctagtcgcg atccgcgaga acgagacccg cgtccgcttc atcggctatc
     1381 aggccagcca ctacaagctc ttggcctttg tggtctcggc aaccatcacc gggctcgccg
     1441 gcacgctcct gctgttcaac aaccggatga cctccgctga cccgatctcg gtcgccttct
     1501 cgggtgagct cttggtgatg gtcatcatcg gcggcatgcg ctctttccta ggccccgcgc
     1561 tcggtgcgct ctttttcgta atcttccgcg actacctatc cagcatcacc gaagattggc
     1621 tgctctactt cggcctcttg ttcgtcgcct tcatcgtgtt ctcgccaaca gggctcgtcg
     1681 ggcttggcga aaggctgctg gcgccgttca agacggcaac ggtcgaggac gcggccatgg
     1741 cgagccgcca ggcgggcgcc atcgaactgc ccgccttcct gaagccgaag gatcatcgcg
     1801 acggcgcaat cttggaagtc gagggcatcg ccaagagctt cggcggcatc aaagccgttc
     1861 aggacgtgag cttctcagtc aaggatcgca ccttgcacgc cctgatcgga ccgaacggcg
     1921 ccggcaagac aaccgcattc aacctaatct ctggcatgta cacgcccgac gcgggcagcg
     1981 tcacgctcga cgggcgcgcc gtcggcggac tgacgcccgg agccatcact caggccggcg
     2041 tcggccgctc gttccagatc accaacctgt tcccgtcgct caccgtcgcc gaaaacgtgc
     2101 ggcttgccgt gcagtcgcgc gaccgcaagc gcttcggctt ctggaccgcg gccaaagacc
     2161 tcgagcaggt caacagcgag gccaccgaga tgatacgcac gatggggctc gccggcatcg
     2221 agcgcgccga ggctggatca ctgtcctatg gcggccaacg gctgctcgac atggcgctgg
     2281 cactcgccac caggccgcgc atcctgctgc tcgacgagcc gctcgccggc cttgctgccg
     2341 ccgagcgcga gcgtgttggt cgcctgatca agcagatctc gatcgacatg ccggtcctgc
     2401 tggtggagca cgacatcgat cgcgtgttcc agcttgccga cgccgtcacg gtgatgaatg
     2461 atggccacgt gcttgtcgac ggcacggtcg aggacgcccg ctcctcgccg tcggtgcagg
     2521 aggtctacat cggctcgggc acccacgcgc tcgccggcaa atctcgaccg tccgcggccc
     2581 agcctcaatc gctgctgacg ctcgagggtg tcaatacgct ctacggcaaa agccatatcc
     2641 tccacgacgt cgccttcgac gtgcacgaga acgagattgt cgcgctcctc ggccgcaatg
     2701 gcgcgggcaa gtcgacggtc ctgaaaacga tcgtcggtat tgcgccgccc gcgcgcggca
     2761 ccattgcgct cgcggccgag caactggccg gccgcccatc agccgagatc acgcgtcgcg
     2821 gcatctccta cgtgccgcag ggccgcggcc tgttcgccgg catgagcgtc gcccagaaca
     2881 tggagctcgg ccggctgcgc cgccgcaacg gcgccggcgt gtactgggac gaggacaaga
     2941 tcttcacttt cttcccgcgc atcaaggagc gctggcgctc gcccgccgac tacctgtccg
     3001 gtggggagca gcagatggtg gcggttgcgc gtgccctgtc gggcaatacg cgcatcctgc
     3061 tgctcgacga gccgttcgag ggccttgctc cggccgtggt cgaggagctg ttcgaggcgt
     3121 tcgacaagct tcgacgcgag atctcgatcc tgatcgtcga tcaccacctc gatctggcgc
     3181 ttgcgctctc ggatcgcacg gtcgcgctcg aacgtgggca ggtggcgtac atgggcccat
     3241 cgaaggcgct gtctgaggac ctggacctgc gccgaaaggt gctgtggct
//
LOCUS       DATMQB010000345         8079 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1392853, whole genome shotgun sequence.
ACCESSION   DATMQB010000345 DATMQB010000000
VERSION     DATMQB010000345.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8079)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8079)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8079
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1392853"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..487
                     /locus_tag="VNY79_09805"
     CDS             <1..487
                     /locus_tag="VNY79_09805"
                     /inference="COORDINATES: protein motif:HMM:NF021603.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF2336 domain-containing protein"
                     /protein_id="HWX72784.1"
                     /translation="AGAAIDGVVAEAVGGIRSEARKVSPDFATAQAEVERRNRIRRIG
                     EAEIYQYACERKFEETAIALSLLCDTPIDVVERALLDPGAEIVLILAKVAGLSSTTTK
                     AILLLRAADRGMSAQDLEQALSSFNRLQPDTARRVLGFFRTRVKKPAQPMVPPAVAVN
                     G"
     gene            complement(522..833)
                     /locus_tag="VNY79_09810"
     CDS             complement(522..833)
                     /locus_tag="VNY79_09810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine zipper domain-containing protein"
                     /protein_id="HWX72785.1"
                     /translation="MMRTAAAVIFLALAAMTAAQQVAAQDPVGGAIVGGALGAIIGGA
                     IGHGAGGAIAGAAIGATTGAVIAAQAQRRNGGYYWWNGGCYYRYPNGGWIQIQPGYCA
                     Y"
     gene            1284..1682
                     /gene="speD"
                     /locus_tag="VNY79_09815"
     CDS             1284..1682
                     /gene="speD"
                     /locus_tag="VNY79_09815"
                     /EC_number="4.1.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013419601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004014 - adenosylmethionine decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0008295 - spermidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylmethionine decarboxylase"
                     /protein_id="HWX72786.1"
                     /translation="MAAPAPVEDRQDHFAVRNGVRCAGVHLIVDLYEAQHLDDIDHIE
                     ATLRRCVQAASATLLHIHLHHFQPNGVSGVAVLAESHISIHTWPEAGYAALDVFMCGS
                     ANPDACIPVLREAFSAKRVGVSELLRGQGA"
     gene            1784..2665
                     /gene="speE"
                     /locus_tag="VNY79_09820"
     CDS             1784..2665
                     /gene="speE"
                     /locus_tag="VNY79_09820"
                     /EC_number="2.5.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007009873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyamine aminopropyltransferase"
                     /protein_id="HWX72787.1"
                     /translation="MAEKRWIAETLFDDLGFRMSYQVDKVLYEMQTEHQHLVLFEHPF
                     FGKMLMLDGATQITKRDEFIYQEMMSHVPLFAHGQAREVLIIGGGDCGIAEEVLKHKS
                     VKRLTQVEIDPAVIEFSKEHFPEFTKPVFADKRFESVIDDGMKYVARTERRFDAIIVD
                     STDPQGPGKVLFSQKFYAACKRCMNKGAVLVTQNGVPMFQPNELASSVAKFRRLFADG
                     TCYVAAIPTYVGGHMAMGWASDDRRLRQTPVKTLAARYRKAGAFSTRYWTPEVHAAAF
                     ALPRFIADVVAKARPRR"
     gene            2831..3505
                     /locus_tag="VNY79_09825"
     CDS             2831..3505
                     /locus_tag="VNY79_09825"
                     /inference="COORDINATES: protein motif:HMM:NF025850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HWX72788.1"
                     /translation="MKLYMHPVSMTSRPVRLFIAENKIPVDEVTVDLFTGEHMKPPYS
                     DLNPNSLVPMIEDGDLRLTESSAILKYLADKIGSPAYPKDLKARAKVNEIMDWLNTNF
                     YRDWAYNLAYPQLFPNQKRRSDEAQAATIEVGQQNAKRWLKVLNDHWIGPKNQYLCGN
                     QITIADYFGAGLVTLGEVIRCDLSAYPNVQRWLNNVKKLPSWNKVNEVFHGLVESVKQ
                     QQFHAI"
     gene            3595..4809
                     /locus_tag="VNY79_09830"
     CDS             3595..4809
                     /locus_tag="VNY79_09830"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HWX72789.1"
                     /translation="MRTSRDHILTSHAGSLPRPDDLIEANRARDSGQTADDRRFQDHL
                     KAAVADVVSQQRAIGIDVPGDGEFGKSMGHKVNYRAWWSYCFNRLGGLDLGGPGLYDT
                     GPRRSRPGEVLLTSFSDRRDRTKFLAVYKDPDGGVTTGPPMASWPVCVGPVVYKGQEA
                     IQSDIAHFKAALKAAGVEEGFMTAVAPGSAARFANRYYKTDEEFIFACADALHEEYKA
                     IVDAGLILQLDDPAIAENWDMINPEPTVADYQKFTMVRVEAINHAIKGLPQDRIRFHL
                     CWGSWHGPHTTDIPMRDIVEVMLAINCQAYSFEAGNVRHEHEWTVWEDVKLPDGKLIL
                     PGVVSHATNVVEHPELVAQRIVRFANGVGRERVIASTDCGLGGRVHPMVAWAKLEALA
                     QGAALASRELWR"
     gene            complement(4955..5164)
                     /locus_tag="VNY79_09835"
     CDS             complement(4955..5164)
                     /locus_tag="VNY79_09835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008839732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HWX72790.1"
                     /translation="MNWDLIQGDWMQFKDKVRKNWAKLTDEDLTRIGGRRDELIGRLQ
                     ARYGFAKAEAAREIEAWMKAQRRAA"
     gene            5459..6451
                     /gene="meaB"
                     /locus_tag="VNY79_09840"
     CDS             5459..6451
                     /gene="meaB"
                     /locus_tag="VNY79_09840"
                     /EC_number="3.6.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007593571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methylmalonyl Co-A mutase-associated GTPase
                     MeaB"
                     /protein_id="HWX72791.1"
                     /translation="MASSISSADVARLARGIRAGDRAVLSRAITLIESKRADHRRSAA
                     ALMQALVGATGKAVRVGVTGAPGVGKSTTIDALGTMLTKQGRKVAVLAVDPSSRRTGG
                     SILADKTRMARLANDANAFIRPSPASGTLGGVAARTRETMLLCEAAGYDVVLVETIGV
                     GQSEIAVADMTDFFLLLMLPGAGDELQGLKKGVVELADMIAVNKADGDNVPRAKAAAA
                     EYRAALHILTPRSANWSPPVVTYSALTGEGVAALWAHVLDHCEKLTAAGELASRRAEQ
                     QVKWMWAMLEERLFAPLRSDRAIKAALASIEAEVAAGTLAPAAAVDKIVGMFAR"
     gene            6456..7073
                     /locus_tag="VNY79_09845"
     CDS             6456..7073
                     /locus_tag="VNY79_09845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyroglutamyl-peptidase I"
                     /protein_id="HWX72792.1"
                     /translation="MRVLLIGFGPFPGAPLNPSGLLVKSLARRRRPAFAEIVRTSHVF
                     TTTYAAVDRDLAKLREIGADIVLMFGLAGRRRHLCIETRARNAVSLLFPDASGFRPQR
                     GVIAPGEPAALRGAAPFARLLGAVRSSAVPTRLSRDAGRYLCNYAYWRALEQARDGRP
                     LVQFIHIPRVLCGSRRRPGRRPPRLDALVAAGERLLIALIAASRR"
     gene            7166..>8079
                     /locus_tag="VNY79_09850"
     CDS             7166..>8079
                     /locus_tag="VNY79_09850"
                     /inference="COORDINATES: protein motif:HMM:TIGR03808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03808 family TAT-translocated repetitive
                     protein"
                     /protein_id="HWX72793.1"
                     /translation="MNTDRPPPAAALAGAAAGAAATPTHANEPSLPRELVAHSGIDAA
                     ALGVRPNSAEDQSKALQRAIESAAATRAVLHLPPGSYRAGSLQLPPHAAISGTPGATR
                     IVMTGGPSLLSAAASDHIAITGLVLDGGAVALPERRGLLHLAQGRAVHIAECEIVNSG
                     RNGITLEAIEGDVTGNVVSAADIGIFSLDARGLRIAGNTVRGAGNGGILVWRSAPGDD
                     GTLLIDNRIEDVAARAGGSGQYGNAVNIFRAGNVIVRGNRIRNAAFSAVRGNTASNLQ
                     IVGNTCTGLGEVALYAEFGFEGALIANN"
BASE COUNT         1357 a         2790 c         2599 g         1333 t
ORIGIN      
        1 agccggcgcc gccatcgacg gcgtcgtggc cgaggcggtt ggcggcatcc gcagcgaggc
       61 gcgcaaggtc tcgcccgact tcgccaccgc acaggccgag gtggaacggc ggaaccgcat
      121 ccggcggatc ggcgaggccg aaatctatca atatgcgtgc gagcgcaaat tcgaggagac
      181 ggcgatcgcc ctgtcgctgt tgtgcgatac gccgatcgac gtcgtcgagc gcgcgctcct
      241 cgatcccggc gccgagatcg tgctcatcct cgccaaggtc gcgggcctgt catcaacgac
      301 gaccaaggcg atcctgctgc tgcgcgccgc cgatcgcggc atgtcggcgc aggacctcga
      361 acaggccctg tcgagcttca accggctgca gcccgacacg gcccgccgcg tgctcggctt
      421 cttccgcacc cgcgtcaaga aacccgcgca gccgatggtg ccgccggcgg tcgccgtcaa
      481 cggctagcgc cgcgcgcgcc ggtgagcggc aggccgctcc ctcagtaggc gcagtaaccg
      541 ggctggatct gtatccagcc gccgttcggg tagcggtagt agcagccgcc gttccaccaa
      601 taatagccgc cgttgcgccg ctgcgcttga gcggcaatga cggcgccggt ggtggcgccg
      661 atcgcggctc cggcaatggc accgcccgcg ccatgcccga tcgcgccgcc gatgatcgcg
      721 ccgagcgcgc cgccgacgat agcgccgccg accgggtcct gtgccgccac ctgctgcgcc
      781 gccgtcattg ccgcaagcgc caagaaaatc accgctgctg ccgtccgcat catgtcccac
      841 tctcccaacg tttaccgccg cgaatccggc gacaggatag aacatcggcg ggcgcgagtt
      901 gactcgacat cgctccgcgc cctggcgcga cgaccgcatg ccacggcgcg cgtgtcgccg
      961 gcgttttctc tcctcgctct gccgcgtttc ctcgcctcgc tctcatgtcg tggaaggccg
     1021 gcgatcgcct ttacgaagtt ttcttgagaa tccgcttgac tccgggggag ttgcatttat
     1081 gtggggacct tgccgctgtt gatccgtccc acgtggacac gatcgggcgg cattcgcttt
     1141 ccgtggcgcc ggctcgccgg agtctcgggt tctcatctct ggttggggag gacggcatga
     1201 gccagaacgc cctcttgcga tcggggaagg gcttggggat cccaggtacc gcccgaaagg
     1261 aagacaggaa gaccaaactc acagtggcag cgcccgcgcc ggtggaggat cgtcaggatc
     1321 atttcgccgt ccgcaacggc gtgcgctgcg ccggcgtgca tctgatcgtc gacctctacg
     1381 aggcgcagca cctcgacgac atcgaccaca tcgaggccac gctgcgccgc tgcgtccagg
     1441 cggcaagcgc gacgctcctg catatccacc tgcatcactt ccagccgaac ggcgtatccg
     1501 gcgtcgccgt gctggccgag agccacatct ccatccatac gtggccggaa gcgggctacg
     1561 ccgcgctcga cgtgttcatg tgcggctccg ccaatcccga cgcgtgcatt ccggtgctgc
     1621 gcgaggcgtt ctcggcaaag cgggtgggcg tgagcgaatt gttgcgcggc caaggcgcct
     1681 gagccgagcc gcgccggagc ggacctgagc ggccgggacg ggtcccggcc gcttctcttt
     1741 ccgggtccgg aagaccaccc aaaggcacag ccgaggagcc gtcatggctg agaaacgctg
     1801 gattgccgag acgctattcg acgatctcgg ctttcgcatg agctatcagg tcgacaaggt
     1861 gctctacgag atgcagaccg agcaccagca cctcgtgctg ttcgagcatc ccttcttcgg
     1921 caagatgttg atgctcgacg gcgccaccca gatcaccaaa cgcgacgagt tcatctatca
     1981 ggagatgatg tcgcacgtcc cgctgttcgc ccatggccag gcgcgggaag tgctcatcat
     2041 cggcggcggc gactgcggca tcgccgagga ggtgctcaag cacaagagcg tgaagcgcct
     2101 cacgcaggtc gagatcgacc ccgcggtcat cgagttctcc aaggagcatt ttccagagtt
     2161 caccaagccg gtgttcgccg acaagcggtt cgagagcgtg atcgatgacg gcatgaaata
     2221 cgtcgcccgt accgaacggc gcttcgacgc catcatcgtc gattccaccg acccgcaggg
     2281 accgggaaag gtgctgttca gccagaaatt ctacgccgcc tgcaagcgct gcatgaacaa
     2341 gggcgccgtg ctggtgacgc agaacggcgt gccgatgttt cagccgaacg agctcgcctc
     2401 gagcgtggcc aagtttcggc gcctgttcgc cgacggcacc tgctacgtcg ccgcgattcc
     2461 gacctatgtc ggcggccaca tggccatggg ctgggcgagc gacgaccggc ggctgcgcca
     2521 gactccggtg aaaacgctag cggcccgcta ccgcaaggcc ggcgctttct cgaccagata
     2581 ttggacgccc gaagtccacg ccgccgcctt cgcgctgccc cgcttcatcg ccgacgtggt
     2641 ggccaaggcg cggccgcggc ggtgagcgat ttgtgccgcc cgcctcgacg tcacacctat
     2701 tgttcttcag ccggcgcgtc ctgcccacgc cgcggtcatg tgtttgtgat gggaaggact
     2761 ttcgattttg ccgcgcgcaa agatgctcta taagcctgcc caggaatgca caatttggga
     2821 ggaaatggcc atgaagctct acatgcatcc cgtttcgatg acgagccgcc cggtgcggct
     2881 gttcatcgcc gagaacaaga tcccggtcga tgaagtgacg gtcgacctct tcaccggcga
     2941 gcacatgaag ccgccgtact ccgacctgaa ccctaacagc ttggtgccga tgatcgagga
     3001 cggcgacctg cgcctgaccg aaagctcggc gatcctcaaa tacctggccg acaagatcgg
     3061 ctcacccgct tatccgaagg acctcaaggc gcgggccaag gtcaacgaga tcatggactg
     3121 gctcaatacc aatttctatc gcgattgggc ctataatctt gcctatccgc agctattccc
     3181 gaaccagaag cggcggagcg acgaagcgca ggccgccacc atcgaggtcg gccagcagaa
     3241 cgccaagcgc tggctgaaag tcctcaacga ccactggatc ggcccgaaga accagtacct
     3301 gtgcggcaat cagatcacga tcgccgacta tttcggcgcc gggctggtga cgctgggcga
     3361 ggtcatccgc tgcgatcttt cggcttatcc caacgtgcag cgctggctca acaacgtgaa
     3421 gaagctgccg agctggaaca aggtcaacga agtgtttcat ggcctcgtcg agtcggtgaa
     3481 gcagcagcag tttcacgcca tctgacgacg taggacaaac ggcggatgac ggatcaacgg
     3541 aggagcggac ttttgtcggc cctccgtcgc ccgtcttgcg tcgtccgata gcccatgcgc
     3601 acgagccgcg accatattct gaccagccac gccggcagcc tcccgcgtcc cgacgacctg
     3661 atcgaggcca atcgggcgcg cgactccggg caaacagccg acgaccggcg cttccaggat
     3721 cacctcaagg cggctgtggc ggacgtggtg agccagcaga gggccatcgg catcgatgtg
     3781 cccggtgatg gcgagttcgg caaatcgatg ggccacaagg tcaactaccg ggcttggtgg
     3841 agctactgct tcaatcggct cggcggcctc gatctcggtg gccctggcct ctacgacacc
     3901 ggcccgcggc ggagccgccc gggcgaggtc ctgctcacga gcttctcgga ccggcgtgat
     3961 cgaaccaagt tcctggcggt ctacaaggat cctgacggag gggtgacgac cgggccgccg
     4021 atggccagct ggccggtgtg cgtcgggccg gtcgtctaca aggggcagga ggcgatccag
     4081 tcggacatcg cccatttcaa ggccgccctc aaagccgccg gggtcgagga aggattcatg
     4141 acggcggtcg cgcccggaag cgccgcgcgg ttcgccaacc gctactacaa gaccgacgag
     4201 gagttcatct tcgcctgcgc cgacgcgctg cacgaagagt acaaggcgat cgtcgatgcc
     4261 ggcttgatcc ttcagctcga cgatcccgcc atcgccgaga actgggacat gatcaatccc
     4321 gagccaacgg tcgcggacta ccagaagttc accatggtgc gggtcgaagc gatcaaccac
     4381 gccatcaagg gcctgccgca ggatcgcatc cgctttcatc tgtgctgggg cagctggcac
     4441 gggccgcaca cgaccgatat cccgatgcga gacatcgtgg aggtcatgct ggcgatcaat
     4501 tgccaagcct actccttcga ggcgggcaac gtccgccacg aacacgaatg gacggtctgg
     4561 gaggacgtga agctccccga cggcaagctc attctgccgg gcgtggtcag tcacgccacc
     4621 aatgtggtgg agcaccccga gctcgtcgcc caacggattg ttcgcttcgc caacggcgtc
     4681 ggccgggagc gcgtcattgc ctcgaccgat tgcggactcg gcggccgtgt ccaccccatg
     4741 gtcgcgtggg caaagctcga agcgctggcg cagggcgcgg cgctggccag ccgcgagctc
     4801 tggcgttgaa tcaactccgg cgttgaatca atcagtcgcg gctgggctca agccccctac
     4861 cccggccatc cgtgtcttga cgctctgcgc tcggtgccga agacgtcgat gcccggcagc
     4921 gaggccgggc atgacttgtc tgcacgctga tgtctcacgc ggcgcggcgt tgcgccttca
     4981 tccacgcctc gatttcgcgt gccgcttcgg ccttggcgaa gccgtagcgc gcctgcagcc
     5041 ggccgatcaa ctcatcccgc cggccgccga tgcgcgtgag gtcctcgtcg gtgagcttgg
     5101 cccagttctt tcggaccttg tccttgaatt gcatccaatc gccctgaatc aggtcccagt
     5161 tcatcaagtg tctccttact gaggatggac aggcggcacg cttgcgcgcc ccgccgcgtt
     5221 cggaacgcgc gcagggaaat ccggcgatgc ggcctcaatg ggacgacatc gcggtcattc
     5281 aaggatcaat tctggtccgg atctggcgac ctcgtcatcg ccagaagcgg cgaaacaatc
     5341 cagcggcaaa cagcgaatcg tcgaatggct tcgttgctgc gcgccttgcg acgctccgcg
     5401 gtggccatga acgcgggcgc tgccttgacg ggaggcactc gctcgccgaa gagacatcat
     5461 ggcctcgtcg atttcgtccg ctgatgtggc ccggctcgcg cgcggcatcc gcgccggcga
     5521 ccgcgcggtg ctctcgcgag cgatcacgct gatcgaaagc aagcgcgccg atcaccgccg
     5581 cagcgccgcg gcgctcatgc aggcgctcgt cggcgcgacc ggcaaggcgg tgcgcgtcgg
     5641 cgtcaccggc gcgcccggcg tcggcaagtc gacgaccatc gatgcgctcg gcaccatgct
     5701 caccaagcag ggccgcaagg tcgcagttct ggcggtcgat ccgtcctcgc gccgcactgg
     5761 cggatcgatc ctcgccgaca agacgcgcat ggcgcgcctt gccaacgacg ccaacgcctt
     5821 catccgcccc tcacccgctt ccggcacgct cggcggcgtc gcggcgcgaa cgagggagac
     5881 catgctgctg tgcgaggccg ccggttacga cgtggtgctg gtcgagacca tcggcgtcgg
     5941 ccaatcggag atcgcagtcg ccgacatgac cgactttttc ctcctgctga tgcttccggg
     6001 cgccggcgac gagctgcagg ggctgaagaa gggcgtcgtc gaactcgccg acatgattgc
     6061 agtcaacaag gccgacgggg ataacgtccc ccgcgccaag gcggccgccg ccgaatatcg
     6121 cgccgccctg catatcctca cgccgcgctc cgcgaactgg tcgccgccgg tcgtcaccta
     6181 ttcggcgctg accggcgagg gcgtcgcggc gctctgggcg cacgtccttg atcattgcga
     6241 gaagctcacc gcagcaggcg aactggcatc ccgccgcgcc gagcagcagg tgaagtggat
     6301 gtgggcgatg ctcgaagagc gtctgttcgc gccgttgcgc tcggatcggg cgatcaaggc
     6361 ggcactcgcc tccatcgagg ccgaggtcgc tgccggcacg cttgcgcccg ccgccgccgt
     6421 cgacaagatc gtcggcatgt tcgcacggtg acgcgatgcg cgtgctgctg atcggcttcg
     6481 gccccttccc cggcgcgccg ctcaatccga gcgggctctt ggtcaaatcg ctcgcccgcc
     6541 ggcggcggcc ggccttcgcc gaaatcgtgc ggacgtccca cgtattcacg accacttacg
     6601 cggccgtcga tcgcgacttg gcaaaactca gggaaatcgg ggcggacatc gtcctgatgt
     6661 tcggcctggc cgggcgccgg cgccacctct gcatcgagac gcgggcgcgc aacgccgtct
     6721 cgctcctgtt tcccgacgcg agcggcttcc gtccgcagcg cggtgtgatc gccccgggcg
     6781 agcctgcggc gctgcgcggc gcagcgccgt tcgcccgcct gctcggcgcg gtgcgctcga
     6841 gcgcggttcc gacgcggctg tcgcgcgatg ccggccgcta tctgtgcaac tacgcctatt
     6901 ggcgcgcgct tgagcaggca cgtgacggcc ggccgctggt gcagttcatt catattccgc
     6961 gcgttctctg cggctcgcgc cggcggcctg gacgccgacc accccggctc gacgccctcg
     7021 ttgcggctgg cgaacgcctc ctcattgcgc tcatcgcggc aagccgccgt taaccgcgcc
     7081 ggccggatag tcacctgtgc cgaaccggaa tgcggcagtg ccagggcttg atccgccgtc
     7141 agctgcgtcg cgcgaggagc ctccgatgaa caccgatcgc ccgccgcctg ctgccgcgct
     7201 cgctggggcc gccgcgggcg ccgccgcaac gccgacgcac gcgaacgagc catccttgcc
     7261 gcgcgaactc gtggcgcaca gcgggatcga tgccgctgcc ctcggcgtcc ggccgaacag
     7321 cgcggaggat caaagcaagg cgctgcagcg cgccatcgaa tcggctgcgg ccacgcgcgc
     7381 cgtcctgcac ctgccgccgg gctcgtacag ggccggatcg ttgcagctcc cgccccacgc
     7441 ggcgatctcc ggcacgcccg gagcgacgcg catcgtcatg accggagggc cctcattact
     7501 gtcggcggcc gcaagcgacc atatcgccat caccggcctt gttctcgacg gcggcgccgt
     7561 cgcgcttccc gagcggcgcg gccttctgca tctcgcccag ggccgcgcgg tgcatatcgc
     7621 cgagtgcgag atcgtgaatt ccggccgcaa cggcattacg ctcgaggcga tcgaggggga
     7681 cgtcaccgga aacgtcgtca gcgccgctga cattggcatc ttctcgctcg acgcgcgcgg
     7741 cctgcgcatt gccggcaata cggtgcgcgg cgccggcaat ggcggcattc tggtctggcg
     7801 tagcgcgccc ggcgatgacg gcacgctcct catcgacaac cgcatcgagg acgttgccgc
     7861 cagagccggc ggctccggcc agtacggcaa cgctgtcaat atcttccgcg ccggcaatgt
     7921 catcgtgcgc ggcaaccgca tccgcaacgc cgccttctcg gcggtgcgcg gcaacacggc
     7981 gtcgaacctg cagatcgtcg gcaacacctg caccggcctc ggcgaggtcg cgctctacgc
     8041 cgagttcggc ttcgagggcg cgctcatcgc caacaacat
//
LOCUS       DATMQB010000346         3664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_145870, whole genome shotgun sequence.
ACCESSION   DATMQB010000346 DATMQB010000000
VERSION     DATMQB010000346.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3664
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_145870"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(534..716)
                     /locus_tag="VNY79_09855"
     CDS             complement(534..716)
                     /locus_tag="VNY79_09855"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72794.1"
                     /translation="MPVSLREGDGFHITSLDREDDHGEEGKDEEADRGKEKGRSGAQE
                     EKGGKSDSEEVGQEGC"
     gene            complement(745..2079)
                     /gene="glcF"
                     /locus_tag="VNY79_09860"
     CDS             complement(745..2079)
                     /gene="glcF"
                     /locus_tag="VNY79_09860"
                     /EC_number="1.1.99.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020186127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycolate oxidase subunit GlcF"
                     /protein_id="HWX72795.1"
                     /translation="MQTSFTLAQLADPHVSESEKILRACVHCGFCTATCPTYVLDGNE
                     LDSPRGRIYLIKEMLENDRAATEEVTRHIDRCLSCLACMTTCPSGVHYMHLVDHARAH
                     IENTYRRPLAERLLRTVLAKVMPYPQRFWLALHGAMIAKPLAPLAAAIGLQRIAALLR
                     LSPWRRPHRPLAAQIFPVAAGSRKQGRVALLAGCVNDILAPEINAAAIRVLTRHGVEV
                     VLAQGAGCCGSLVHHMGREKEALTRARANIDAWTTAGRLDAIVITASGCGTTVKDYGF
                     MLRTDSAYAERAARVAKLARDISEYLASLPLAAKPPDRTLAVAYHAACSLQHGQRITR
                     QPKDLLAKLGFSVMDVPEGHLCCGSAGTYNIMQPDIARRLRERKVGTIERLRPDVIAA
                     GNLGCITQIAAGTDLPAVHTVELIDWATGGPCPPALRERRPAGAMRPSGAAR"
     gene            complement(2082..3347)
                     /locus_tag="VNY79_09865"
     CDS             complement(2082..3347)
                     /locus_tag="VNY79_09865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding protein"
                     /protein_id="HWX72796.1"
                     /translation="MSDNLKPRDATDVEEAIRWALAGGKTLEVVGRGSKRAIGRAAQW
                     DATLDLSALTGVTLYEPEELVLSAKAGTPLDEVEALAAASGQGLAFEPMDYGPLLAGA
                     ADAGTIGGTLAGNLSGPRRIKAGAARDHFLGFSAVSGRGETFKSGGRVVKNVTGYDLC
                     KLLAGSWGTLAAMTDVTVKTLPRAESEETVLVMDLDDGAAGKVMASVMGSFADVSAAA
                     HLPAAAAARITETASAHRGVTAFRLEGVAPSIAHRKSVLERLVAPFGALDTLGAAASR
                     AFWRAVRDVAPFAAKRDPHSTATGSASLSPGEQRCVWRISTAPSRGAEIGRALVERAG
                     AEIMYDWAGGLVWAAVSVSDDAHAPLVRASVAAAGGHATLVRAPAALRAKVDVFEPEP
                     AVLAALTARVREGFDPRGVLNPGRMWAGV"
BASE COUNT          572 a         1274 c         1226 g          592 t
ORIGIN      
        1 tcggcttcgg ccggcaggca gacgagccgg atgctgtggc cgccgaacag gagcttggag
       61 gcgagcagcg atccgtagga tgcgcccatg atcaggagtt tgcaggtcgc cggcatcagg
      121 cacctcccca tggctccgcc cggtctgagc cggggcggct atcggcgtct gcgcgccgtt
      181 tcgtcttcgc ctgccgctga tgctagtgac cccgccgagc cgatgcaacg cgaatagtcc
      241 ctgcccacgc ccgccgggcg cgagcccgcg gcgcgggacg tcgcggagca gagatcggag
      301 ctattcgccc ggaaagcctt cgctttgcgc gcccggggcg cggcccgctc gcgcggccgc
      361 gctccggatt gtcaacgggc agggacggct agctgctgtc gccgccgccg aaattcgagc
      421 cgacggacga cggagaccat gacggagccg cttcggctgg tgccggggct gccggtcggg
      481 ccggcgcctt gcgcttcggc gccgatctct tcgtcacctt cttaaccgcc ctcttaacag
      541 ccttcttggc cgacttcttc gctgtcgctt ttaccgccct tttcttcttg cgcgccggag
      601 cggccttttt ctttgccgcg gtccgcttct tcgtctttgc cttcttcgcc atgatcgtcc
      661 tcccgatcca agctggtaat gtggaacccg tcgccctctc gcagggagac cggcattgca
      721 tcacgcgccg aacgagcccc ctgctcacct cgctgccccg gacgggcgca tcgcccccgc
      781 cggccgacgt tcccgaagcg cgggcggaca tggtcccccg gtggcccagt cgatcaattc
      841 gaccgtgtgg acggcaggga ggtcggtgcc cgcggcgatc tgtgtgatgc agccaagatt
      901 gcctgctgca atcacatcag gtcgcaatct ctcgatagtc ccgactttgc gctcgcgcaa
      961 ccttcttgcg atgtcaggct gcataatatt gtaggtcccc gccgagccgc agcacagatg
     1021 accctccggt acgtccatga ctgagaagcc tagcttggcg agcaaatcct tcggctgccg
     1081 cgtaattcgt tgtccgtgct gcagcgagca ggccgcgtga taggcgacgg cgagcgtgcg
     1141 atctggcggc ttggccgcga gcggcagcga ggcgagatac tcgctgatat ctcgcgcgag
     1201 ctttgccacc cgggcggcgc gttcggcgta ggccgaatca gtgcgcagca tgaagccata
     1261 atccttcacc gtagtgccgc aacccgaggc ggtgatcacg atcgcgtcga ggcggccggc
     1321 cgtggtccag gcgtcgatat tggcgcgcgc ccgggtgagc gcctcctttt cacggcccat
     1381 gtggtggacg agcgagccgc aacagcccgc gccctgcgcc agcactactt cgacgccgtg
     1441 acgcgtgagc acacggatcg cggcggcgtt gatttccggc gccaggatgt cgttgacgca
     1501 gccggccagc aaggccacgc gaccctgctt ccgcgacccg gcggcgaccg ggaagatttg
     1561 cgccgcgagc gggcggtgcg gtcgacgcca cggcgacagg cgcaacaggg cggcgatgcg
     1621 ctggagcccg atggccgccg cgagcggcgc caacggcttg gcgatcatcg caccgtggag
     1681 cgccagccag aagcgttgcg gataaggcat cacctttgcc agcacggtgc gcaaaaggcg
     1741 ctcggccagc ggccggcggt acgtgttctc gatgtgggcg cgggcgtgat cgaccagatg
     1801 catgtagtgg acgccggacg ggcaggtcgt catgcaggcg aggcaggaca ggcaacggtc
     1861 gatatgccgg gtgacctcct cggtcgccgc ccggtcgttc tccagcattt ccttgatcag
     1921 gtagatgcgc ccgcgcggcg aatcgagctc gttgccgtcg agcacataag ttgggcaggt
     1981 ggcggtgcag aagccgcagt gcacgcaggc gcgcaggatc ttttcggatt ccgagacgtg
     2041 cggatcggcc agctgcgcca aggtgaagga agtctgcatt tctacacacc cgcccacatg
     2101 cgcccgggat tgagcacgcc ccgcggatcg aaaccctccc gcacgcgcgc cgtcaatgcc
     2161 gcaagcacgg ccggctccgg ctcgaacacg tcgaccttgg cgcggagcgc cgcgggagcg
     2221 cgaacgagcg tcgcgtggcc gccggccgcg gccacgctgg cgcgaacgag cggagcgtgc
     2281 gcgtcgtcgg aaacggacac ggcggcccat acgaggccac cggcccaatc gtacatgatc
     2341 tcggcgccgg ctctctcgac gagcgcgcgc ccgatttcgg cgccgcggga cggcgccgtc
     2401 gagatacgcc agacgcaccg ttgttcccct ggcgagaggg aggccgatcc cgtggcggtt
     2461 gagtgggggt cgcgcttcgc cgcgaatggc gcgacgtcgc gcaccgcacg ccaaaacgcc
     2521 cgcgaagccg ctgcaccgag cgtgtcgagc gcgccgaaag gcgccacgag cctctccagc
     2581 acgctcttgc gatgcgcaat cgatggcgcg acgccttcga gccgaaacgc cgtgacgccg
     2641 cgatgcgccg atgcggtttc ggtaatgcgg gccgcggccg cggccggcag atgcgccgcc
     2701 gccgagacat ccgcaaagga gcccatgacc gaagccatga ccttgccggc ggccccgtcg
     2761 tcaaggtcca tcaccagaac ggtctcctcg ctttcggccc gcggcagtgt cttcaccgtc
     2821 acgtcggtca tggccgcaag cgtaccccag gagccggcga gaagcttgca gaggtcgtag
     2881 ccggtgacgt tcttcacaac gcggccgccg gatttgaagg tctcgccgcg cccggaaacg
     2941 gcactgaagc cgagaaaatg atcgcgcgcg gcgccggcct ttatccgccg cggcccggag
     3001 aggtttccag cgagtgtacc gccgatcgtg cccgcgtccg ccgcaccagc gagaagaggc
     3061 ccgtaatcca tcggctcgaa ggccagcccc tggccgcttg cggcggccag cgcttccacc
     3121 tcgtcgagcg gcgtgccggc cttcgccgac agcaccagct cctccggctc gtagagcgtg
     3181 acgccggtca gggccgaaag gtcgagcgtc gcgtcccact gtgccgcccg gccgatcgcg
     3241 cgcttgctgc cccgcccgac gacttcgagc gtcttgccgc ccgcgagcgc ccagcggatc
     3301 gcctcctcga cgtccgtcgc atcgcgcggt ttgagattgt cgctcatgcg caagccaagc
     3361 cgtgccgccg ctccattccc tctccttccg ctccgccgag ggtaccccgg tagccatagg
     3421 ctccgaggcg agtaagagcc agggttcgcc ggagcagagg gcctcaccag atcccttgct
     3481 tcgctcggat cgcctctccc gcagaggaga gcttggttag aaacgcggaa tatccgggaa
     3541 cgccaccttg cccgcgtgca cgtgcatgcg gccgagctcg gcgcagcggt gcaacgtcgg
     3601 gaagaccttg ccgggattga gcaatccctt gccgtcgaac gcgcatttga ggcgctgctg
     3661 ctgg
//
LOCUS       DATMQB010000347         7631 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1087276, whole genome shotgun sequence.
ACCESSION   DATMQB010000347 DATMQB010000000
VERSION     DATMQB010000347.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7631)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7631)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7631
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1087276"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1206
                     /locus_tag="VNY79_09870"
     CDS             <1..1206
                     /locus_tag="VNY79_09870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HWX72797.1"
                     /translation="FRLAIGVFVLGSIGCALSRSLEEFVLARIVQGMGGAMMTPVGRL
                     ILVRSIDKGQLVNAMSLVTIPALIGPICGPPLGGFITTYASWPWIFIINVPIGLAGVV
                     MATRYIPDVRAEPPGRFDFVGFVLSTLAIGGLAFGLSVMGLAFLPAGVVAALIAVGTV
                     SSVAYCVHARRTAAPILDLNLFKFASFRASILGGFLFRLGIGALPFLLPLLLQIGFHL
                     TPFESGLITFTGALGSMFMKAAVARVLRRFGYRPVLVYNSIISGAFLAACASFVPGMP
                     FLAMVAILLTGGFFRSLQFTSVNTLAYAEIEPPLMSRATSIVSVVQQLALSTGVAVGA
                     LIVEITLRLKHSEIMSATDFPPAFLVIGALTAASGLIFRRLPPDAGAELSGRGSVHPM
                     RRTRPRSVQ"
     gene            complement(1290..1943)
                     /locus_tag="VNY79_09875"
     CDS             complement(1290..1943)
                     /locus_tag="VNY79_09875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007568123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RlmE family RNA methyltransferase"
                     /protein_id="HWX72798.1"
                     /translation="MARLKGEKRRTPSSRAWLERQISDPYVARAKREGFRSRAAYKLA
                     EIDDKYRLLRPGAHVVDLGAAPGGWSEIAARRIGAHGRVIAIDILEMKPVAGVEFLQL
                     DFLDETAPGRLKAMLDGKADVVLSDMAANATGHRQTDHLRIMALAEAAAHFAREVLSE
                     GGSFLCKVLQGGTEAALLAALKRDFASVKHVKPPASRSDSAELYLLARGFRGASAAT"
     gene            complement(1950..3068)
                     /locus_tag="VNY79_09880"
     CDS             complement(1950..3068)
                     /locus_tag="VNY79_09880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Ppx/GppA phosphatase family protein"
                     /protein_id="HWX72799.1"
                     /translation="MNEEARPSGDRSRHRAPRRRSRWARRTPYGIRRDGGFRDESRAP
                     LDPHDDATYAALDLGTNNCRLLIARPTANGFRVVDAFSRIIRLGEGVAASRRISEAAI
                     ARAVEALLVCRDKMRARGVVRARLIATAACRAAENAEAFRARVADEAGVELEIVDSAT
                     EARLAAAGCTELLDPAAGGVILFDIGGGSSELVRLGRPNGAGRGPPEAEIVGWASLPV
                     GVVTLAERYGGTAVPRDVYDAMVDEVAASVEKFAVAHRGDLADFHMLGTSGTVTTIAG
                     VFLRLKRYDRRRVDGCWLSDGEVSRVVAELMAMSFDERAANPCIGAERADLVLAGCAI
                     LDAIRRAFPCERLRVADRGLREGMLVEMMRADGVWGQA"
     gene            3253..5661
                     /locus_tag="VNY79_09885"
     CDS             3253..5661
                     /locus_tag="VNY79_09885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HWX72800.1"
                     /translation="MNLHEPAKRRADDLATDEFSADRLAVTKFAIGQSLPRSEDPMLL
                     RGQGRYTDDVSLPGQAYAVMVRSRNAHGLIRAIAIEAASAAPGVLGVYTAADLQSYGP
                     LKCVVPFKNRDGSPMKKPWRGALAKDKVRYVGDPIACVVAETLNAAKDAAEAVEADID
                     PLPAVVSAEDAARAGAPLLYDDVPGNVALDYHYGDADAVSAAFAAAAHVTRLNLVNSR
                     VVVAAMEPRAALASHDGSRFTLYVSSQGVFGMRANIAEALGIAAKDVRIMTGQVGGSF
                     GMKAAVFPEYICLLHATRALGRPVKWTDERSGSFVSDSHGRNHDVAGELALAADSTFL
                     AVRLTSFANMGAFLSPVAPMPGTLNAVKNVQGMYRTPLIEVSSKCVFTNTSHVSAYRG
                     AGRPEGNYYMERLIDTAAAEIGIDRVALRRRNQIRPQDLPCKTASDMTYDSGDFAALT
                     KHALDLADGKGFAQRKRESRKRGRLRGLGVGNFLEVTAPPSKELADVAFNGDGTVTLT
                     TGTLDFGMGHATSFAQVLGEKLGIPVEKISLVQGDSDRLAAGGGSGGSKSLMHSGTAI
                     VEAAAKIIEKGKEIASHVLEAAAADIEFSSGSFVIGGTDRAISLLELARLLRNGVKLP
                     ADAPQSLDVTHVSDGPGASTFPNGCHVAEVEVDPETGVVDVVKYCCVNDFGTVVNPMI
                     VEGQLHGGVVQGIGQALMEVAVYDDDGQLLTGSFMDYAMPRAEDVPPSFVVADHPVPA
                     KTNPLGVKGCGEAGCAGALTSVTNAVIDALAERGIRHVDMPLTPFRIWQALHAPNGVG
                     HSNP"
     gene            5658..6893
                     /locus_tag="VNY79_09890"
     CDS             5658..6893
                     /locus_tag="VNY79_09890"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HWX72801.1"
                     /translation="MTQAVSIPAGRFGEWRVVGPVCAAHFVSHYYMMMLAPLFAFVRA
                     DYGVSYTDLGLALAGFNVASALLQTPAGFLVDRIGARSVLIAGVVIGAAAFAVAGIVN
                     SFAVFVAMYTVAGIGNAAYHPADYSLLSHHTPPARLGQVFSYHTFSGILGSAVAPATL
                     LAMQSHYGWRGAHVGAAILGFAVVALLLAQRPGPEDRSAARRRTDTLSGVGNESSQTR
                     DHGWRFLLSPPIMLNLCFFVLLSLAGGLQTFLVVALAALYGTSAALANVALTGLLAAS
                     ALGVLAGGVLASRATNYVAVAGFGLALAGVATALVGIIDFSSFALVLMMSLSGFFGGL
                     VAPSRDLLVRAATPEGAFGRVFGFVSTGFNIGSMIAPMIYGAFMDRGEPRALFFLSAA
                     SSILCIGAVLLGSQRRARY"
     gene            6954..7229
                     /locus_tag="VNY79_09895"
     CDS             6954..7229
                     /locus_tag="VNY79_09895"
                     /inference="COORDINATES: protein motif:HMM:NF012722.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase dimerization/phospho-acceptor
                     domain-containing protein"
                     /protein_id="HWX72802.1"
                     /translation="MERLKDEFVSTVSHEPRTPLTSIAGSLGLLVGGAASELPKSALR
                     LIGIAAPLQPTWKRVQDAINHGRCQAVTHVVGEPAVSPRCAALEISI"
     gene            complement(7254..>7631)
                     /locus_tag="VNY79_09900"
     CDS             complement(7254..>7631)
                     /locus_tag="VNY79_09900"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72803.1"
                     /translation="FRVNALQLSRWCHCAPPVTVPGDRGGLGNLPESSCGSMKSFRRV
                     GSYNPLSFLHCRTPSTGTIPSLSESSDEYMLRIVAVPLSAFTGRVYKRIGKSWIYLDA
                     RFRYLQNVTNRINHILEKPRIYR"
BASE COUNT         1187 a         2573 c         2451 g         1420 t
ORIGIN      
        1 ttccgcctcg ccatcggcgt gttcgtcctc ggctcgatcg gctgtgcgct ctcgcgctcg
       61 ctcgaggaat tcgtgctggc gcggatcgtc cagggcatgg gcggggcgat gatgacgccg
      121 gtcggccgcc tcatcctcgt gcgcagcatc gacaaggggc agctcgtcaa tgccatgtcg
      181 ctcgtgacca taccggcttt gatcggcccg atctgcgggc ccccgctcgg cggcttcatc
      241 accacctacg catcgtggcc gtggatcttc atcatcaatg tgccgatcgg ccttgccggc
      301 gtggtcatgg cgacgcgcta cattccggat gtccgtgccg agccgcccgg ccgcttcgac
      361 ttcgtcggtt tcgtcctttc cacactcgcc atcggcgggc ttgccttcgg cctttcggtc
      421 atggggctcg cttttctgcc ggccggcgtg gtcgccgcgc tcatcgccgt cggcactgtt
      481 tcaagcgttg cctattgcgt ccatgcgcgg cgcacggcgg cgccgatcct cgatctcaat
      541 ctcttcaagt ttgcgagctt ccgcgccagc attttggggg gcttcctgtt caggctcggc
      601 atcggcgccc tgcccttcct gctgccgctg ctgctgcaaa tcggtttcca cctgacgccg
      661 ttcgagtcgg gcctcattac cttcactggc gcgctcggct cgatgttcat gaaggcggcg
      721 gtcgcgcgcg tgctgcgacg cttcggctat cgcccagtgc tcgtctacaa cagcatcatc
      781 agcggcgctt ttctcgccgc gtgcgcgagc ttcgttcccg gcatgccatt tctggccatg
      841 gtcgctattc tgctgaccgg cggtttcttt cgttcgctgc aattcaccag cgtcaacacc
      901 ctcgcctatg ccgagatcga gccgccgctg atgagccgcg caacctcgat cgtctccgtc
      961 gtccagcaat tggcactctc gaccggcgtc gccgtgggcg cgctcatcgt cgagatcacc
     1021 ctgcggctca agcattccga aatcatgagc gccaccgact ttccgccggc attcctggta
     1081 atcggcgcgc tcaccgctgc ctccgggctg atcttccggc gccttccgcc cgacgcggga
     1141 gccgagcttt ccgggcgcgg cagcgtgcac cccatgcggc gaacacgccc gcgtagcgtt
     1201 cagtgatcga gggcgagccg acgcggcagg ccaatcatgc gcaccctgca agggtgcgca
     1261 cagctccgtt ccgttctctc cttatgtcgc tacgtcgccg ctgatgcgcc gcgaaagccg
     1321 cgggcgagca gataaagctc cgccgaatcg ctgcggctcg ccggtggctt gacatgcttc
     1381 acgctggcga agtcccgctt gagcgcggcg agcagcgccg cttcggttcc cccttgcagc
     1441 accttgcaca ggaagcttcc gccttccgac aggacctcgc gcgcgaaatg ggcggccgcc
     1501 tcggcaagtg ccatgatgcg cagatggtcg gtctgccgat ggccggtggc gttggccgcc
     1561 atgtcggaga ggacgacgtc ggccttgccg tccagcatgg ccttgagccg gcccggcgcg
     1621 gtttcgtcga ggaaatcgag ttgcaggaac tcaacgccgg cgacgggttt catctcgaga
     1681 atatcgatcg cgatgacgcg tccgtgcgcg ccgatgcgtc gcgccgcgat ttcgctccag
     1741 ccgccgggcg ccgcgccgag atcgacgaca tgcgcgcccg gcctcagcag gcggtatttg
     1801 tcgtcaatct cggcgagctt gtacgcggcg cgggagcgaa atccctcgcg cttcgcgcgc
     1861 gccacgtagg ggtcgcttat ctggcgttcg agccaggcgc gagaggacgg cgtgcgacgt
     1921 ttctcgccct taaggcgcgc catggccggt caggcctggc cccacacgcc gtcagcgcgc
     1981 atcatctcga cgagcatgcc ctcgcgcagg ccgcgatcgg caacgcgcag gcgttcgcag
     2041 ggaaaggcgc ggcggatggc gtcgaggatg gcgcagccgg cgagcaccag gtcggcgcgc
     2101 tcggcgccga tgcagggatt ggccgcacgc tcgtcgaagc tcatggccat gagctcggcc
     2161 acgactcgtg acacttcgcc gtcggacagc cagcagccgt cgacgcgccg gcggtcatag
     2221 cgcttgagcc gcaggaacac gccggcgatc gtcgtgaccg tgccggacgt gccgagcatg
     2281 tgaaaatcgg cgaggtcgcc gcggtgcgcg actgcgaact tctcgacgga cgcggcgacc
     2341 tcgtccacca tcgcgtcata gacgtcgcgc ggcaccgcgg tgccgccgta acgttcggcg
     2401 agcgtgacga cgccgactgg cagcgaggcc cagccgacga tctccgcctc aggcggtccg
     2461 cggccagcgc cgttcggccg gccgagccgc accagctcgg aagagccgcc gccgatatcg
     2521 aacaggatga cgccgccagc ggccgggtcc aacagttccg tgcaaccggc cgccgccagt
     2581 ctcgcctccg tcgccgaatc aacgatttcg agttcgacgc cggcctcgtc cgcgacgcgg
     2641 gcgcggaacg cttcggcgtt ctccgccgcg cggcacgccg ccgtggcgat gagccgcgcg
     2701 cgtaccacgc cgcgcgcgcg catcttgtcc cggcacacca gcagcgcctc gaccgcgcgc
     2761 gcaatcgccg cctcgctgat ccgccgcgaa gcggcaacgc cttcgccgag gcgaatgatg
     2821 cgggaaaacg cgtcgacgac gcgaaacccg ttggcggtcg ggcgtgcgat gaggagccgg
     2881 caattgttgg tgccgaggtc gagcgccgcg taggttgcat cgtcgtgtgg gtccagcggc
     2941 gctcgcgatt catcgcggaa accaccgtcg cggcggatgc cgtagggcgt ccggcgagcc
     3001 cagcgggacc gccgtcgcgg cgcccggtgc ctgctgcggt cgccgctagg ccgggcctcc
     3061 tcgttcataa ccgccttcct gccgcgccgg aacttagctt cgacggctca acttggggcg
     3121 aaatgtatca gccgcggcca accgggccaa tactgtgctt ttcacgccta tgagccatgc
     3181 cggcgtccag cttgtcgccc atcatcaact ccactatgtc agccagtgat ttttcgcgag
     3241 atcggaccag ccatgaacct gcacgagccg gccaagcggc gggcggacga tctggcgacg
     3301 gacgagtttt cagcggacag attggcggtc acgaaatttg ccatcgggca gtccttgccg
     3361 cgcagcgagg atcctatgct cctgcgcgga caaggccgct acaccgacga cgtcagcctc
     3421 cccggccagg cctatgcggt gatggtgcgc agccgcaacg ctcacggcct cattcgcgcc
     3481 attgcgatcg aagccgcgtc ggcagcgccc ggcgtgctcg gcgtctacac cgccgccgat
     3541 ctgcaatcct atggcccgct caaatgcgtc gtgccgttca agaatcgcga cggctcgccg
     3601 atgaagaagc cgtggcgcgg ggcgctcgcg aaagacaagg tgcgttatgt cggcgatccc
     3661 atcgcctgcg tcgtcgctga gacgctcaac gccgccaaag atgccgccga agccgttgag
     3721 gccgatatcg atcccctgcc cgcggtcgta tccgccgaag acgccgcgcg cgccggcgcg
     3781 ccgcttcttt acgacgacgt gcccggcaat gtggcgctcg attatcacta tggtgacgcc
     3841 gacgccgtga gcgcggcgtt tgccgcggcg gcccacgtca cccgcttgaa cctcgtcaac
     3901 agccgcgtcg tcgtcgccgc gatggagccg cgcgcggcgc tcgcatccca tgacggcagc
     3961 cgcttcaccc tttacgtcag ctcgcaaggc gtgttcggca tgcgcgccaa cattgccgag
     4021 gcgctcggca tcgcggccaa ggatgtacgc atcatgaccg gccaggtcgg cggctccttc
     4081 ggcatgaaag cggcggtgtt tcccgaatac atctgcctgc tgcatgccac ccgcgcgctc
     4141 ggccggccag tgaagtggac cgatgagcgc tccggaagct ttgtttccga cagccacggc
     4201 cgcaatcacg atgtcgccgg cgagctcgcg ctcgccgccg atagcacttt cctcgctgtg
     4261 cgcctcacga gctttgccaa tatgggcgcg ttcctttcgc cggtagcgcc gatgccgggg
     4321 acgctcaacg ccgtcaagaa cgtgcagggg atgtatcgca cgccgctgat cgaagtctcc
     4381 agcaagtgcg tgttcaccaa tacgtcgcac gtctccgcct accgcggcgc cggccgcccg
     4441 gaaggcaact actacatgga gcggctgatc gatacggccg cggccgaaat cggaatcgac
     4501 cgcgtcgcgc tgcgtcggcg caatcagatc cggccgcagg atctgccgtg caagaccgcg
     4561 tccgacatga cctatgacag cggtgatttt gccgcgctga ccaagcatgc gctggacctg
     4621 gccgacggca agggctttgc ccagcgcaag cgcgagagcc gcaagcgcgg ccggctgcgc
     4681 ggactcggtg ttggcaactt tctggaagtc accgcgccgc cgtcgaagga attggccgac
     4741 gtcgccttca acggcgacgg cacggtgacg ctgaccaccg gcacgctcga cttcggcatg
     4801 gggcacgcca cgtcgttcgc gcaggtgctg ggcgagaagc tcggcatccc ggtcgagaaa
     4861 atatcgctcg tgcagggcga cagcgatcgg ctcgccgccg gcggcggcag cggcgggtcg
     4921 aaatcgctga tgcacagcgg caccgcgatc gtcgaagccg ccgccaagat catcgagaag
     4981 ggcaaggaga tcgccagcca cgtgctcgaa gcggccgccg ccgacatcga gttcagtagc
     5041 ggcagcttcg tcatcggcgg taccgaccgc gccatctcgc tgctcgagct tgcgcggttg
     5101 ctgcgcaacg gcgtcaagct gcctgcggac gcgccgcaat cgctcgacgt cacgcatgtc
     5161 agcgacggcc cgggcgcttc gacctttccc aacggctgtc acgtcgccga ggtcgaggtc
     5221 gatccggaga ccggtgtggt cgacgtggtg aaatattgct gcgtcaacga ttttggcact
     5281 gtggtcaatc cgatgatcgt cgagggccag cttcacggcg gcgtggtgca gggcatcggg
     5341 caggcgctga tggaggtcgc ggtctacgac gacgacggac aattgctgac cggctcgttc
     5401 atggactacg ccatgccgcg cgccgaagac gtgccgccgt cctttgtcgt cgccgatcat
     5461 ccggtgccgg ccaagaccaa cccactcggc gtcaagggat gcggcgaggc cggttgcgcc
     5521 ggcgccctca cgtcggtgac gaatgcggtc attgacgcac ttgccgagcg cggcatccgc
     5581 catgtcgaca tgccgttgac cccgttccgc atctggcagg cgctgcacgc gccgaacggc
     5641 gtcgggcact ccaatccatg acgcaagcgg tttcgatccc ggccgggcgg ttcggcgaat
     5701 ggcgggtggt cgggcccgtc tgcgcagcgc actttgtcag tcattattac atgatgatgc
     5761 tggcgccgtt gttcgcgttc gtgcgcgcgg actacggcgt gagctacacc gacctcgggc
     5821 tggcgctggc cgggttcaac gtggcctcgg ccctgctaca gacacccgcc ggatttctcg
     5881 tcgaccggat cggcgcgcgc agcgtgctga ttgccggcgt cgtcatcggc gccgctgcct
     5941 ttgcggtcgc tggcatcgtc aattcctttg ccgtgtttgt cgccatgtat accgtcgccg
     6001 gcatcggcaa cgccgcgtat cacccggctg actattcgct tctctcccat cacactccac
     6061 cggcgcggct tgggcaggtg ttctcgtacc acacgttttc cggaatcctc ggctccgccg
     6121 tggcgccggc cacgttgctg gcgatgcaga gccattacgg ctggcgcggc gcccatgtcg
     6181 gcgccgcaat cctcgggttc gcggtggtcg cccttctgtt ggcgcagcgg cctgggcccg
     6241 aggaccgatc ggccgcaagg cggcggaccg atacgttgag cggtgtcggc aatgaatcgt
     6301 cgcagacccg cgaccacggt tggcgttttc tgctgtcacc accgatcatg ctgaatctct
     6361 gcttcttcgt gctgctttcg cttgcgggag ggttgcagac attcctcgtg gtcgcgctcg
     6421 ccgcgctcta tggcacgtcg gccgctctgg cgaatgtcgc gctcaccgga ttgctggcgg
     6481 caagcgcgct cggcgtgctc gcgggcggcg tgctggcctc gcgcgcgacc aactacgtcg
     6541 ccgtcgccgg tttcggcctg gcacttgccg gtgtcgccac cgccctcgtc ggcatcattg
     6601 atttctcctc ctttgcgctc gtgctgatga tgtcgctctc tggttttttc ggcggcctgg
     6661 tcgccccgtc gcgcgacctt ctggtgcgcg cggcaacgcc ggagggtgcg ttcgggcgcg
     6721 tcttcggttt cgtcagcacc gggttcaaca tcggctcgat gatcgcgccg atgatatatg
     6781 gcgctttcat ggatcgcggc gagccgcgcg cgttgttttt cttgtcagcg gcctccagca
     6841 ttctctgcat cggcgccgtg ctgctggggt cgcagcggcg ggcgcggtac tgaaacaagg
     6901 acgggcgcag ttcccagctc agcgtcatcg tcgatacgag cgagcgcaaa cggatggaac
     6961 gcctgaagga cgaattcgtc tccaccgtga gtcacgagcc ccgtacgccg ctgacctcga
     7021 tcgccggctc cctcggcctg ctcgtcggtg gtgccgccag cgagctgccg aaatcggcgc
     7081 tgcgtctgat cgggattgcg gcgccgttgc agccgacttg gaaacgcgtg caagatgcca
     7141 taaaccacgg tcggtgccag gctgtcactc acgtcgtcgg tgaacctgcc gtgagtccaa
     7201 gatgcgctgc tttggagata agtatttgag tacgttgcaa aatggggaat agttcaacgg
     7261 tagattcgcg gtttttcgag tatgtgattg attctgttcg tgacgttttg caaataccga
     7321 aagcgtgcat ccaaataaat ccaagacttt ccgatgcgtt tgtaaactct ccctgtgaag
     7381 gcggagagcg gtaccgcgac aattctgagc atatattcgt cagaggattc tgaaagagag
     7441 ggaatggtgc ccgtggaggg tgtgcggcaa tgtagaaaac tcaatgggtt ataacttcca
     7501 acccggcgaa aacttttcat tgagccacaa gagctttcag gcaaatttcc caacccccca
     7561 cgatcccccg gcactgtaac agggggcgca caatggcacc agcggcttaa ctgcaaggca
     7621 ttaacgcgga a
//
LOCUS       DATMQB010000348         2418 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2946791, whole genome shotgun sequence.
ACCESSION   DATMQB010000348 DATMQB010000000
VERSION     DATMQB010000348.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2418)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2418)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2418
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2946791"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..318
                     /locus_tag="VNY79_09905"
     CDS             <1..318
                     /locus_tag="VNY79_09905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0004518 - nuclease activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YraN family protein"
                     /protein_id="HWX72804.1"
                     /translation="SRAAMFLIAKGYRIAARRWKTPFGEIDIVARRRHALVFVEVKAR
                     ERIDDAAEAVTERARRRILAAAELWLAHHPDDARRYISFDVMLVAPGKMPRHIANAFD
                     TSR"
     gene            399..1340
                     /gene="gshB"
                     /locus_tag="VNY79_09910"
     CDS             399..1340
                     /gene="gshB"
                     /locus_tag="VNY79_09910"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004363 - glutathione synthase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006750 - glutathione biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione synthase"
                     /protein_id="HWX72805.1"
                     /translation="MSLNVAVQMDPIERINIRGDSTFALLLEAQARGHRLAYYTPDRL
                     VLRDGKVSATVQALEVRDVAGGHFSLGEPRSADLASFDVVLLRQDPPFDLAYISTTHM
                     LERIQPQTLVVNDPAQVRNAPEKIFVTEFPELMPPTLITRDLAAIKAFRAEQGDVVMK
                     PLYGKGGEAVFRVAREDLNFGSLYDLFATMFREPWVVQKFLPAVKDGDKRIILVDGEF
                     AGAVNRVPAPDDLRSNMVRGGVPKATDLALREREICARLGPALRERGLLFVGIDVIDG
                     FLTEINVTSPTGIRAVKNLGGPDIAALIWDKIEAKRK"
     gene            complement(1404..>2418)
                     /locus_tag="VNY79_09915"
     CDS             complement(1404..>2418)
                     /locus_tag="VNY79_09915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004671766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HWX72806.1"
                     /translation="VASLAMTHVWQLVLLWGVVIGVGTGLTAIVLAATVAARWFTQRR
                     GLVVGLLSASSATGQLVFLPLIADLTERFGWRIALVFVCGLLAAAALAALALMRDRPS
                     DLNLPPYGESAVLPPPPAGAGLMSLLTAPLEVLSDAARVPLFWVLFGTFFICGLSTNG
                     LIQTHFITLCGDYGLTAVSAASVLAMMGVFDFIGTIGSGWLADRYDNRWLLFWYYGLR
                     GLSLLYLPFTSFTFYGLSLFAVFYGLDWIATVPPTVKLTADRFGRERAGMVFGWVFAG
                     HQIGAATAAFGAGFSRTEFASYLPAFFVAGMLCLVAAMLVLTIAKPSSAGAVGAAPAP
                     ARG"
BASE COUNT          447 a          824 c          800 g          347 t
ORIGIN      
        1 agccgcgcgg ccatgttcct catcgccaag ggctaccgca tcgcggcgcg gcgctggaag
       61 acgccgttcg gcgagattga catcgtcgcc cggcgccgcc acgcgctcgt cttcgtcgag
      121 gtcaaggcgc gcgagcgcat cgacgacgcg gcggaagcgg tgaccgagcg tgcccggcgc
      181 cgcattctag cggccgccga gctttggctc gctcaccatc ccgacgatgc ccggcgctac
      241 atcagcttcg acgtcatgtt ggttgcgccc ggcaagatgc cgcggcacat cgccaacgcc
      301 ttcgacacga gccgctgaat gccgtcgcgc gccatggcga cagccggcaa aattgcgtag
      361 acgttgacga cgagatcgcc gggggtgcgc atcgatctat gagcctgaac gtcgcagtgc
      421 agatggaccc gatcgagcgg atcaacatcc gcggcgattc gacgttcgcg ctgctgttgg
      481 aggcgcaggc ccgcggccat cgcctcgcct actacacccc cgaccgcctc gtcctgcgcg
      541 acggcaaagt gtccgcgacc gtgcaggcgc tcgaggtgcg cgacgttgcc ggcggccatt
      601 tctcgctcgg cgagccgcgg tccgccgatc tcgcgtcgtt cgacgtcgtg ctgctgcggc
      661 aggatccgcc gttcgacctc gcctatatca gcacgacgca catgctcgag cgcatccagc
      721 cgcagacgct ggtcgtcaac gatccggcgc aggtacgcaa cgcgccggaa aaaattttcg
      781 tcaccgagtt tcccgagctg atgccgccga cgctgatcac ccgcgatctg gcggccatca
      841 aggcgttccg cgccgagcag ggcgacgtcg tgatgaagcc gctgtacggc aagggcggcg
      901 aggcggtctt ccgcgtggcg cgcgaagatc tcaatttcgg ctcgctctac gaccttttcg
      961 ctacgatgtt ccgcgagcct tgggtagtgc agaaattctt gccggcggtg aaggacggcg
     1021 acaagcgcat catcctggtc gacggcgaat ttgccggtgc ggtcaaccgc gtgccggcgc
     1081 ccgacgatct gcgctccaac atggtgcgtg gcggcgtgcc taaggcgacc gacctcgcgc
     1141 ttcgcgaacg cgagatctgc gcccgcctcg ggccggcgct gcgcgagcgc ggcctgctct
     1201 tcgtcggcat cgacgtgatc gacggcttcc tcaccgagat caacgtgact tcgccgaccg
     1261 gcatccgcgc ggtgaagaat ctcggcggcc ccgacatcgc ggcgctgatc tgggacaaga
     1321 tcgaggcgaa gcggaaataa gagctttcct cagctgagca tgatcttgtc ggaaaatcgg
     1381 cttccacttt tccggatcat gctctagccg cgggccggcg ctggcgcggc gccgacggcg
     1441 cccgccgacg acggcttggc gatggtcagg accagcatcg ctgcaacgag gcacagcatc
     1501 ccggcgacga agaaggccgg caggtagctc gcaaattccg tgcgcgaaaa cccggcgccg
     1561 aaggccgccg tcgcggcgcc gatctgatgg cccgcaaaga cccagccaaa caccattccg
     1621 gcgcgctccc ggccgaaacg gtcggcggtg agctttaccg tgggcggaac ggtcgcgatc
     1681 cagtcgaggc cgtagaacac ggcaaacagc gagaggccgt agaacgtgaa gctcgtgaac
     1741 ggcagataga gcagcgaaag cccgcgcagc ccgtagtacc agaacagcag ccagcgattg
     1801 tcgtagcggt cggcgagcca gccggagccg atcgtgccga tgaaatcgaa gacgcccatc
     1861 atggcgagca cgctcgccgc actcaccgcg gtcagcccgt agtcgccgca gagcgtgatg
     1921 aaatgcgtct ggatcagccc gttggtgctc aggccgcaga tgaagaacgt gccgaacagc
     1981 acccagaaca gcggcacgcg ggccgcatcg ctcagtacct caagcggcgc cgtcaacagt
     2041 gacatgaggc cggcaccggc cggcggcggc ggcagcaccg cgctctcgcc gtagggcggc
     2101 agattgagat cgctcggccg gtcgcgcatc agcgccagcg cggcgagggc agccgccgcc
     2161 agcaggccgc agacaaagac gagcgcgatc cgccagccga agcgctcggt caaatccgcg
     2221 atcagcggca ggaataccag ttgcccggtc gccgaactcg ccgagagaag gcccaccacc
     2281 agcccgcggc gctgggtgaa ccagcgcgcc gcgacagtcg cggcgagcac gatcgcggtg
     2341 aggccggtgc cgacgccgat cacgacgccc cagaggagca ccagttgcca tacgtgcgtc
     2401 atcgccagcg aggcgaca
//
LOCUS       DATMQB010000349         6346 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1395974, whole genome shotgun sequence.
ACCESSION   DATMQB010000349 DATMQB010000000
VERSION     DATMQB010000349.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6346)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6346)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6346
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1395974"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1542
                     /gene="cofH"
                     /locus_tag="VNY79_09920"
     CDS             <1..1542
                     /gene="cofH"
                     /locus_tag="VNY79_09920"
                     /EC_number="2.5.1.147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-amino-6-(D-ribitylamino)uracil--L-tyrosine
                     4-hydroxyphenyl transferase CofH"
                     /protein_id="HWX72807.1"
                     /translation="PNLSYDDFPKLLSAGINDWGGVSPVTPDFVNPEAPWPTIARLAR
                     GSESRGYQLVERLAVYPSYATEPARWQAPAMVARVFAATDMEGFARENEWAPGADVPV
                     PITPAPFMAPRPRSLDRVLSAAAAGNRLEAAEIIRLFAARGPESEDVIQAADELRQQA
                     VGGTVRYVVNRNINYTNVCYFHCRFCAFSKGKTHEELRGRPYDLSLEEVARRVDEAWA
                     RGATEVCMQGGIHPDYTGETYVGLLRAVKEAAPQIHIHAFSPLEISQGARSLGIDVTS
                     FLARLKDEGLGTLPGTAAEILDDEVRRVLCPDKINTAEWLNVVASAHRIGLRTTATIM
                     FGHMERAHSWAAHLLAVRDLQEITGGFTEFVPLPFVHFEAPLYLKGQARRGPTWRETL
                     LMHAVARLALHPLIVNIQASWVKLGPDGAKGALAAGANDLGGTLMNESISRAAGTAHG
                     QELPPARMDALIRETGRQPVQRTTLYGEADPARVRASYRASLLTPVVQTPLRERRAEP
                     ASLQR"
     gene            1539..2309
                     /gene="cofE"
                     /locus_tag="VNY79_09925"
     CDS             1539..2309
                     /gene="cofE"
                     /locus_tag="VNY79_09925"
                     /EC_number="6.3.2.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043773 - coenzyme F420-0 gamma-glutamyl
                     ligase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="coenzyme F420-0:L-glutamate ligase"
                     /protein_id="HWX72808.1"
                     /translation="MSKRVELLALETLPRIMPGDDLAGLILAACDRESAGPLPDDVLV
                     VAQKIISKAEGRIVRLAEVESSPEALRLARISGKDPRIVELILRESEEIVRCVPGLVI
                     ARHRLGVVLANAGIDQSNIGAGDEAEAALLWPLDPDASADLLRREIAEQRGTKIAVIV
                     NDSLGRAWRKGTIGAAIGLAGLAGVVDLRGRADLFGRKLQSTEVGQADEIAAAASLVM
                     GQADEGRPVVIVRGVSYQQRAAASARQITRERKLDLFP"
     gene            complement(2397..3065)
                     /locus_tag="VNY79_09930"
     CDS             complement(2397..3065)
                     /locus_tag="VNY79_09930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family oxidoreductase"
                     /protein_id="HWX72809.1"
                     /translation="MAESDVPSVHVDVVSDVVCPWCYIGKRRLEMAVALTPEIAVEVN
                     WRPYFLNQWIPREGIDRQTYLETKFGSPGRYAVIAERVAAAAAIEGLPFAIDKISRQP
                     NTLDCHRLILWSRSATDPGEMKQRLMELYFAEGADLSDPKTLIRAAVDCGMDGDLVRR
                     LLASDADVDRVENEANGAKEAGIDGVPCFIFGGSVIVTGAQSPEYLANAIQRIAGQHT
                     RLQA"
     gene            complement(3227..4498)
                     /locus_tag="VNY79_09935"
     CDS             complement(3227..4498)
                     /locus_tag="VNY79_09935"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HWX72810.1"
                     /translation="MALQGPFVVVAESPAPDLVEALRAAGAFPIVESSWADAAAALDS
                     VQPEGFLLAEPSSDRKRAAALAQALAHRLESGNDPFIPVLARVRDDGAVSLPDALTIA
                     ASASAERIAQRFAAALRIRALHGTVLRRTRTLAARGELPPELPHTDPLEEATVLVAGR
                     GRSYPELAVAVGERVGLVGALSVETAARALNARDIDGMVIGDGFAGRVIEAMLTVLAE
                     DARFRDLPVAVLGGQANVVERFAEHLPNLERVTEGLTRLVERILPFVRLHAFGERLKR
                     MLKSLDAKGMIDPETGLLVHEAFWRDLNRAVDDADKRGVGLSIARFSFVRGDRRMSLD
                     AARLLSRLMRHVDFACRTMDNSIFAVFTQTDLREAHVIARRIASVLKHTMLEPEQQRG
                     SIETAITLATLKPTDNVDSLIARVVNEAAVG"
     gene            complement(4580..6160)
                     /locus_tag="VNY79_09940"
     CDS             complement(4580..6160)
                     /locus_tag="VNY79_09940"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HWX72811.1"
                     /translation="MILGDPAQASAQAPRGQIRVSIDEMFRRLAERRPDALALADPPN
                     RKNFTDGAPRRLTYAEADRMVAAIAGRLRRMGLPVDAVIGVQMPNIVENILGMLGVLR
                     AGMVVAPLPLLWRRADAVAALARVGAKALISCGRVGDFKHGQFGMRVAAEVFAIRYVC
                     GFGANLPDGVVPFDDLFTADKLDPIPPLERERQANAAAHLAAITFDLSEGGLVPVARN
                     HSELVAAALVVLLESHLAQNANILSTLAPSSFAGLSLTLLPWLLTGGMLSLHHPFDAD
                     VLARQRRDDRCPTLILPGPVASRMAEAGALAGEGQTAVIAAWRGPDGLAMSPTWRAAR
                     TALIDVAVFGEIGLLAGRRGADGRPVPIQFGPVVAPRGSPGGIVLAELLPTAAGTVSF
                     RGPMAPQHTFPPGADRSGLPHLKVERSGVLDTGYAFRIDSSTHAVVVTGPPSGIASVG
                     GYRFPLHDLKEIAGRVDGDATIAALPDPLVGQRLIGNAADRNLMQAGLGAVGVNPLVV
                     AAFRDRSERDSASAERRE"
     gene            complement(6157..>6346)
                     /locus_tag="VNY79_09945"
     CDS             complement(6157..>6346)
                     /locus_tag="VNY79_09945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72812.1"
                     /translation="DDFVAAVRALDRVLVSGCYVVPLFYLSEQWVARWSFVAHPARTS
                     LSGYLPEAWWRQPKRALQ"
BASE COUNT         1050 a         2135 c         2213 g          948 t
ORIGIN      
        1 cccaatctca gctacgacga cttcccgaag ctgctgtcgg cggggatcaa tgactggggc
       61 ggcgtctcgc cggtgacgcc ggacttcgtc aatcccgaag cgccctggcc gacgatcgcg
      121 cgcctggcgc gcggttccga aagccgcggc tatcagcttg tcgagcgcct cgcggtctat
      181 ccctcctacg cgaccgagcc ggcgcgatgg caggcgcccg caatggttgc tcgggtcttc
      241 gccgccaccg acatggaggg attcgcccgc gagaacgaat gggccccggg cgcggacgtc
      301 ccggtaccta tcacgccggc gcccttcatg gcgccgcggc cacgttccct cgaccgcgtg
      361 ctgtccgctg cggcggctgg aaatcgcctc gaagcggccg agatcatccg tctgttcgcg
      421 gcgcgcggtc cggaaagcga ggacgtgatc caggccgccg acgaactgcg ccagcaagcc
      481 gtcggcggca cggtgcgcta tgtcgtcaac cgcaacatca actacacgaa cgtctgctat
      541 ttccactgcc gcttctgcgc tttctcgaag ggcaagaccc acgaggagct gcgcggccgc
      601 ccttacgatc tctcgctcga ggaagtcgcc cgccgggtgg acgaagcgtg ggcgcgcggc
      661 gcgaccgaag tctgcatgca aggcggcata catcccgact ataccggcga gacttatgtc
      721 ggcctgttgc gcgccgtgaa ggaagccgct ccgcaaatcc acattcatgc tttctcgccg
      781 ctcgaaattt cacagggcgc gcgctcactc ggtatcgatg tcacctcctt cctggcgcgc
      841 ctcaaggacg aaggcctcgg cactctgccg gggacggcgg ccgagatcct cgatgacgag
      901 gtgcggcgcg tgctctgccc ggacaagatc aacactgcgg aatggttgaa cgtcgtcgcc
      961 agtgcccatc gcatcggcct gcgcacgacc gccacgatca tgttcggcca catggaaagg
     1021 gcacactcct gggcggcgca tctgctggcg gtccgcgacc tgcaggaaat aaccggaggc
     1081 tttactgagt tcgtgccgct gccgttcgtt catttcgagg cgccgcttta tctgaaaggg
     1141 caggcgcggc gcggcccgac ctggcgggag accctgctga tgcacgcggt cgcgcggctg
     1201 gcgctccatc cgctcattgt caatatccag gcctcgtggg taaagctcgg ccccgacggc
     1261 gccaagggcg cgctcgcggc gggtgcgaac gatctcggtg gcaccctgat gaacgagagc
     1321 atctcgcgcg ccgcgggaac cgcgcacggc caggaattgc cgccggcgcg catggacgcg
     1381 ctcatccgcg aaaccggccg gcagccggtg caacgcacga ccctctacgg cgaggccgat
     1441 ccggcgcgcg ttcgcgcgag ctatcgggcc tcactgctca cgccggtggt gcagacgccg
     1501 cttcgcgagc ggcgcgctga accggcgagc ctgcaacggt gagcaaacgc gtcgagctgc
     1561 tggcgctgga aacgctcccg cggatcatgc cgggcgacga tctcgccggc ttgatcctcg
     1621 cggcctgcga ccgcgaaagc gccgggcctc tgcctgacga cgtgttggtc gtcgcccaga
     1681 agatcatctc caaggcggag ggacggatcg tccgcctcgc cgaagttgag agctcgcccg
     1741 aggctttgcg gctggcgcgg atttcaggga aggacccgcg catcgtcgag ctgatcctgc
     1801 gcgaatccga agagatcgtc cgctgcgttc ccggcctcgt catcgcccgc caccggctcg
     1861 gcgtcgtcct ggccaatgcc gggatcgatc agtcgaacat cggcgcgggc gacgaagcag
     1921 aggcggctct gctctggccg ctcgatcccg acgccagcgc cgacctgctc cggcgcgaga
     1981 ttgcggagca gcgcgggacc aagatcgcgg tgatcgttaa tgacagtctc ggccgcgctt
     2041 ggcgcaaagg tacgatcggc gccgccatcg ggctcgcggg actggcgggc gtggtcgact
     2101 tgcgcggccg cgccgatctg ttcggccgca agctgcagag caccgaggtc gggcaggccg
     2161 acgagatcgc cgccgcagcc tcgctggtca tgggtcaggc cgacgaaggc cggccggtcg
     2221 tcatcgtgcg cggcgtgtct tatcagcaac gcgcggcggc aagcgcccgc cagatcacgc
     2281 gcgaacgcaa gctcgaccta ttcccgtaag atgcgtaccc atgcgcagga actcatgtgg
     2341 ccgcgtgaac aggcacaccg cagagcccgc accgagaccg tgcggggttg ccgcgcttat
     2401 gcctgcagcc gcgtgtgttg tccggcgatg cgctggatgg cattggccag atattccggc
     2461 gactgggcgc cggtgacgat gacgctgccg ccgaagataa agcacggcac gccgtcgatg
     2521 ccggcttcct tggcgccgtt cgcttcattt tcgacgcgat ccacgtcggc gtcgctggcc
     2581 aggagccggc gcaccaagtc gccgtccatg ccgcaatcga cggcagcgcg gatcagcgtc
     2641 ttcggatcgc tgaggtcggc gccctcggcg aagtagagtt ccatcagccg ctgtttcatc
     2701 tcgccgggat cggtggcgct gcgcgaccac aggatgaggc ggtgacagtc gagggtgttc
     2761 ggctggcggc tgatcttgtc gatggcgaag gggagcccct cgatcgcggc cgcggcggcg
     2821 actcgctcgg cgatgaccgc gtagcgtcca ggggacccga acttggtctc cagatacgtc
     2881 tgccggtcga taccttcgcg cggaatccac tgattgagga aatagggccg ccagttgacc
     2941 tcgacggcga tctcgggcgt gagcgcgacc gccatttcca ggcggcgctt gccgatatag
     3001 caccacggac agacgacatc ggaaacgacg tcgacgtgca cggagggaac gtcggattcg
     3061 gccatcaaga gcgcctccga ttgcttgcgg tcagcctagc gcaatttccg gcccgctgga
     3121 ccgcttgcct ccgcgaaaag tggggaccgg tcgctaccgc cgcaaccacc cttggacttc
     3181 ctccggcttc ggtagcgagc caaggaagcg tagagggcgg tctcattcaa ccgacggcag
     3241 cctcgttcac caccctggcg atgagggaat cgacgttgtc ggtcggcttc aaggtcgcaa
     3301 gcgtgatcgc cgtctcgatg ctgccgcgct gctgctccgg ctcgagcatc gtgtgtttga
     3361 gcacgctggc gatccggcgg gcgatgacgt gggcttcgcg cagatcggtc tgggtgaaca
     3421 ccgcaaaaat tgaattgtcc atcgtccggc aggcgaagtc gacgtggcgc atgagccggc
     3481 tcagcaggcg cgccgcatcg aggctcatgc ggcggtcacc gcggacgaag gagaagcgcg
     3541 cgatcgacag gccgacgccg cgcttatcgg catcgtcgac ggctcggttg aggtcgcgcc
     3601 agaaggcctc atgcacgagc agcccggtct ccgggtcgat catgcctttg gcgtcgagcg
     3661 atttcagcat gcgcttgagc cgctcgccga acgcatgcag gcgcacgaac ggcagaattc
     3721 gctcgacgag ccgggtcagc ccttcggtca cgcgttcgag gttgggcaga tgctcggcaa
     3781 accgctcgac gacattggcc tggccgccga gaacggcgac cggtaaatcg cgaaagcgcg
     3841 cgtcctcggc gagcaccgtg agcatcgcct cgatgacgcg cccggcaaaa ccgtcgccga
     3901 tcaccatgcc gtcgatgtca cgggcgttga gcgcgcgcgc cgcggtctcg acgctgagcg
     3961 cgccgacgag gccgacgcgt tcgccgacgg cgacggcgag ctccggatag gagcggccgc
     4021 gtccggcaac cagcacggtc gcttcctcga gcggatcggt gtgcggcaat tccggcggca
     4081 gttcgccgcg cgcggcgagc gtccgggtgc ggcgcagcac cgtgccgtgc agcgcgcgga
     4141 tgcgcagggc ggcggcgaag cgctgcgcaa tgcgctcggc cgatgcgctt gcggcgatcg
     4201 tcagcgcgtc cggcagcgaa acggcgccgt cgtcgcggac gcgggcgagg accggaatga
     4261 atggatcatt gccgctttcg agccggtggg cgagggcctg cgccagtgcc gcggcacgct
     4321 tgcggtcgct gctcggctcg gcgagcagga agccctcggg ctgcaccgag tcgagggcgg
     4381 cggccgcgtc ggcccagctc gactcgacaa tcgggaaggc acccgccgcg cgcagcgcct
     4441 cgaccagatc cggcgccggg ctctcggcaa cgacgacgaa cggaccttgc aacgccatgg
     4501 cgggacgccg aattcgaggg gcagccacgc accatgccaa agcgctgtta atggcgcgtc
     4561 aacgcggcgt gctttcgttc tactcccttc gctccgcgct cgcggaatcg cgctcgctgc
     4621 ggtcgcggaa ggcggcgacg acgagcggat tgacgccaac ggcgccgagg ccagcctgca
     4681 tcaagttgcg atcggcggcg ttgccgatca ggcgttggcc gacgaggggg tcgggcagcg
     4741 ccgcaatggt ggcatcgccg tcgacgcggc cggcgatctc cttgaggtcg tggaggggga
     4801 accggtagcc gccgacgctg gcgatcccgg agggcggacc ggtgaccacg accgcgtgcg
     4861 tactggaatc gatgcggaac gcataaccgg tatccaacac cccgctgcgt tcgaccttga
     4921 ggtgcggcag gccggaacga tcggcgccag gcgggaaggt atgctgcggc gccatcgggc
     4981 cgcgaaagga caccgtgcct gcggcggtcg gcagcagttc ggcgagcacg atcccgccgg
     5041 gactgccccg cggcgcgacg accgggccga attgaatcgg aaccgggcgt ccatcggcgc
     5101 cgcggcgccc ggcgaggagc ccgatttcgc cgaagaccgc aacgtcgatc agggcggtcc
     5161 gcgccgcgcg ccacgtcggg ctcatggcga gcccgtccgg cccgcgccat gcggcgatca
     5221 ccgcggtttg gccctcgccc gccaacgcgc ccgcttcggc catccgggac gcgaccggac
     5281 cgggcaaaat cagcgtcggg catcggtcgt cccgccgctg tcgagcgaga acgtccgcat
     5341 cgaatggatg atggagcgag agcatgccgc cggtaaggag ccacggcagc agcgtcaggc
     5401 tcagaccggc gaacgaggag ggcgcaagcg tcgagaggat gttggcgttc tgcgccagat
     5461 ggctctcgag cagcacgacg agcgcagccg cgaccagttc ggaatgattg cgcgccaccg
     5521 gcacgaggcc tccttcgctc aggtcgaagg tgatcgccgc aaggtgcgcc gcggcgttgg
     5581 cctgccgctc gcgctcgagc ggcgggatcg ggtcgagctt gtcggccgtg aacagatcgt
     5641 cgaacggcac cacgccgtca ggcaggttcg cgccgaagcc gcacacgtag cggatggcga
     5701 acacttccgc ggccacgcgc atgccgaatt ggccgtgctt gaaatcgccg acgcgcccgc
     5761 agctgatcag cgccttggcg ccgacgcggg cgagcgcggc gaccgcgtcg gcgcggcgcc
     5821 acagaagggg cagcggcgcg acgaccattc ccgcccgcag cacgccaagc atccccagga
     5881 tgttttcgac gatgttgggc atctgcacgc cgatgacggc atcgaccggc aggcccatgc
     5941 ggcgcagccg cccggcgatc gccgccacca tgcggtccgc ctcggcatag gtcaggcgcc
     6001 gcggagcccc gtcggtgaag tttttacggt tcggcgggtc ggcgagcgcg agcgcatcgg
     6061 gtcgccgttc ggcgaggcgg cggaacatct cgtcgatgct gacgcggatc tggccgcgtg
     6121 gcgcctgcgc cgaagcttga gcgggatcgc cgaggatcat tgcagcgccc gtttcggctg
     6181 acgccaccac gcttccggca ggtagccgga gagcgaggtg cgcgccggat gggcgacgaa
     6241 ggaccagcgc gccacccatt gctcggaaag ataaaacaac ggcaccacgt agcagccgga
     6301 gaccagcacg cggtcgagag cacgcaccgc ggcgacgaaa tcgtca
//
LOCUS       DATMQB010000350         2348 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2948464, whole genome shotgun sequence.
ACCESSION   DATMQB010000350 DATMQB010000000
VERSION     DATMQB010000350.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2348)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2348)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2348
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2948464"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1762)
                     /locus_tag="VNY79_09950"
     CDS             complement(<1..1762)
                     /locus_tag="VNY79_09950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012030062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0015441 - ABC-type beta-glucan transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015775 - beta-glucan transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucan ABC transporter ATP-binding protein/
                     permease"
                     /protein_id="HWX72813.1"
                     /translation="MSFIRLYLRVLDMLAAEVRLAATLALANIALAVALFVEPVLFGR
                     IVDALSGPLPAGVASAALMLAPLVGAWIAFGLFTIVAGALVAWFADRLAHRRRNLVLA
                     EFFEHVLHLPLSYHAGTHSGRQLKIMLTGTDTLWWLWVSFFREHFSAFVFIAVLLPAA
                     ILLNWRLAMPLLALAVVFTAVTVLVMHKAERLQRAVERHYSDLAETAADALGNVALVQ
                     SFARIEREVSSLKSLVNSLLRAQMPVLSWWAVAAVLTRAATTLTLLVILVAGAYLKLV
                     GLASVGAIVSFMALAALLIARLEQIVGFANRLFLDAPKLSEFFAVLDTVPAVRDRPDA
                     MDPGRVRGLVEFKTVSFSYDGKRPAVADLSFTALPGERIALVGPTGSGKTTALALLHR
                     AFDPQSGFITVDGMDIRALTLTGLRHNIGVVFQETLLFNRSIADNLRVGKPDATDAEI
                     REAAARAQALEFIEGGSEGFEARIGERGRLLSGGERQRLAIARALLKDPPILILDEAT
                     SALDPLTEERVNLALEEVMKGRTSFIIAHRLATVRNATRILVLNNGRIVEAGSYDELI
                     RLGGFFSEFARVQLAPAAEKL"
     gene            complement(1880..2326)
                     /locus_tag="VNY79_09955"
     CDS             complement(1880..2326)
                     /locus_tag="VNY79_09955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011316065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HWX72814.1"
                     /translation="MSKRGRLSHAFTCRVRDTCLCLHVQRAARALARRFDEALRPLAL
                     TQGQFSLLMSLNRPQPPSIGEVSALLAMDRTTVTANVKPLERRGLVKVRVDREDRRNR
                     RLELTPSGRALLAAAAPMWQRAHAATERRLRSSSPDILRASLHDLC"
BASE COUNT          420 a          757 c          841 g          330 t
ORIGIN      
        1 ccagtttctc tgccgccggc gccagctgaa cgcgcgcgaa ttcggaaaag aagccgccga
       61 gccggatgag ctcgtcgtag ctccccgctt cgacgatgcg gccgttgttg agcaccagaa
      121 tgcgggtggc gttgcgcacc gtggcgagcc gatgcgcgat gatgaaactg gtgcggccct
      181 tcatcacctc ttcgagggca aggttgaccc gctcctcggt gagggggtcg agcgcgctgg
      241 tcgcctcgtc gaggatcagg atcggcgggt ctttgagcag cgcgcgggcg atcgccaggc
      301 gctggcgttc gccgcccgag agcagccgcc cgcgctcgcc gatgcgtgct tcgaagcctt
      361 cgctgccgcc ctcgatgaat tcgagcgctt gcgcgcgggc ggcggcttcg cggatctcgg
      421 catcggtggc gtcgggcttg ccgacgcgca ggttgtcggc aatcgagcgg ttgaacagca
      481 gcgtctcctg gaacacgacc ccgatattgt ggcgcaggcc ggtgagagtg agcgcgcgaa
      541 tgtccatgcc gtcgacggtg atgaatccgg actgcggatc gaaagcgcga tgcagcagcg
      601 cgagcgcggt cgtcttgccg ctgccggtcg gcccgaccag cgcgatccgc tctcccggca
      661 gcgcggtgaa gctcaaatcg gcgacggccg gacgcttgcc gtcgtaggag aacgacaccg
      721 tcttgaactc cacgagcccg cgcacgcggc cgggatccat cgcgtccggc cggtcgcgca
      781 ccgcgggcac ggtgtcgagc acggcgaaga attcggagag cttcggcgcg tcgaggaaca
      841 ggcggttggc gaagccgacg atctgctcga gccgggcgat cagcagcgcc gccagtgcca
      901 tgaagctgac gatggcgccg accgaggcga ggccgacgag cttgagatag gctccggcca
      961 ccaggatcac gagcaaggtc agagtggtgg cggcgcgggt gagcaccgca gccaccgccc
     1021 accacgacag caccggcatc tgcgcgcgca ggagcgagtt caccaggctc ttgagcgacg
     1081 acacctcgcg ctcgatgcgg gcgaagctct gcaccagcgc gacgttgccg agcgcgtcgg
     1141 ccgcggtttc ggcgagatcg gaatagtggc gctcgacggc gcgctgcagc cgttcggctt
     1201 tgtgcatgac gaggacggtc accgccgtga agacgacggc gagcgccagc aacggcatcg
     1261 cgagccgcca gttgagcagg atcgcagccg gcaggagcac ggcgatgaag acgaaggcgg
     1321 aaaaatgctc gcggaagaac gacacccaca gccaccacaa ggtgtcggtg ccggtgagca
     1381 tgatcttgag ctgccggccc gaatgcgtgc cggcgtgata gctcagcggg aggtgcagga
     1441 cgtgctcgaa aaactcggcg agcaccaggt tgcggcggcg gtgcgccagc cggtcggcaa
     1501 accaggccac cagggcgccg gccacgatag tgaacaaccc gaaagcgatc caggcgccga
     1561 ccagcggcgc gagcatgagc gcggctgacg ctacgccggc gggaagcgga ccggacagag
     1621 cgtccacgat gcggccgaac aggaccggct cgacgaaaag cgccaccgcc agcgcgatat
     1681 tggcaagcgc cagcgtcgcg gcgaggcgga cctcggctgc gagcatatcg agcacgcgca
     1741 gatagaggcg gatgaaggac atcgtggcgt acgctcggag aatccgccgc ttcggtttgg
     1801 cgcacagaaa ttcgttcgcc cccgggaact tccgcgcccg cggcccgatc ctcgatttag
     1861 cccgattggg agcctcttgt cagcacaggt catgcaggct cgcgcgcaaa atatccgggc
     1921 tggaactccg cagccgacgt tccgtcgctg cgtgcgcgcg ctgccacatc ggggcggcgg
     1981 cggcgaggag ggcccgcccg gaaggcgtca gttcgagccg gcggttgcgc ctgtcttcgc
     2041 ggtccaccct caccttcacc aggccgcgcc gttcaagcgg cttgacgttg gcggtcaccg
     2101 tggtgcggtc catggcgagc agggccgaga cctcgccaat gctcggcggc tgcggacgat
     2161 tgagcgacat caggagcgag aactggccct gggtcagcgc cagcggccgc aacgcctcgt
     2221 cgaagcgccg cgccagcgcg cgcgccgccc gctgcacgtg caggcaaagg caagtgtcgc
     2281 ggacgcggca cgtgaaggcg tgggacaatc ggccgcgctt tgacatgcgg tcattatgtt
     2341 gatatcaa
//
LOCUS       DATMQB010000351         4889 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2629157, whole genome shotgun sequence.
ACCESSION   DATMQB010000351 DATMQB010000000
VERSION     DATMQB010000351.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4889)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4889)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4889
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2629157"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..642)
                     /gene="argC"
                     /locus_tag="VNY79_09960"
     CDS             complement(<1..642)
                     /gene="argC"
                     /locus_tag="VNY79_09960"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003942 -
                     N-acetyl-gamma-glutamyl-phosphate reductase activity
                     [Evidence IEA];
                     GO_process: GO:0006592 - ornithine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HWX72815.1"
                     /translation="MSAQKQNAKIGVLGASGYTGAELVRLLIAHPHVAIALLTADRRA
                     GQAMADVFPQFSPYRLPPLTALDAADWAALKLDLVFCALPHGTTQQVIKDLVARAPGT
                     KIVDLSADFRLADPAAYARWYGHAHAALELQQEAVYGLTEIYRREIKAARLVANPGCY
                     TTCAELALIPLLKAKAIDADEIVIDAKSGVTGAGRAAREDMLFAEVSEGFHAYG"
     gene            1014..3095
                     /gene="parE"
                     /locus_tag="VNY79_09965"
     CDS             1014..3095
                     /gene="parE"
                     /locus_tag="VNY79_09965"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009340 - DNA topoisomerase IV complex
                     [Evidence IEA];
                     GO_function: GO:0003918 - DNA topoisomerase type II
                     (double strand cut, ATP-hydrolyzing) activity [Evidence
                     IEA];
                     GO_process: GO:0006265 - DNA topological change [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HWX72816.1"
                     /translation="MGKIEKITKTTPNAPDLFASLPESRGGATRGRSARAGRASARGA
                     AAESGYTARHIEVLEGLEPVRRRPGMYIGGTDEKALHHLFAEVIDNAMDEALAGHADW
                     IEVEMATDGFVTVTDNGRGIPVDPHPKFPKKSALEVIMCTLHAGGKFDSKVYETSGGL
                     HGVGVSVANALSERMEVEVARGQKLYRMAFERGKPKSKLQDGGKAPNRRGTKVRFRPD
                     PEIFGAKAHFRPERVFKMTRSKAYLFGGVEIRWSCTKELLRGVDNVPEQATFHFADGL
                     RDYLSETLAGTTLVHPDTFTGSAGKTGAHGGVQWAVAWSADADGFLNSYCNTIPTPDG
                     GTHESGVRAALLRGLKDHAERVGQGKRAAAITSEDVMVGAAAMLSVFIREPEFQGQTK
                     DRLATAEAQRIVEQAIKDPFDHWLAGNPLQANKLFDFVLERAEERIRRRQEKEIARKT
                     AVKKLRLPGKLADCTNAAAEGSELFVVEGDSAGGTAKQARDRASQAVLPLRGKILNVA
                     SAGQEKLAQNQQLADLVQALGCGTGAHYRDEDLRYGRVVIMTDADVDGAHIASLLITF
                     FYRQMPQLIDKGHLYLAVPPLYRLSHGGKIFYARNEAHRDELLRREFHANAKVEISRF
                     KGLGEMMAPQLKETTMDPKKRMLLRVVLLADDRQDTANSVERLMGTKAEARFAFIQER
                     AEFADEESLDV"
     gene            complement(3235..4488)
                     /locus_tag="VNY79_09970"
     CDS             complement(3235..4488)
                     /locus_tag="VNY79_09970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic murein transglycosylase"
                     /protein_id="HWX72817.1"
                     /translation="MQTSRVPHRPARDAKPSRRESLGLAFAAAAALMAPATAAPAAGD
                     FAQWVARFRAKALARGISGETYDRAMDGLRPDTTGLAAIRTQPEFNEQIWQYLNRRVS
                     DWRVIAGKEKANEYAALFSRIEKDFGVERSVMLGVWGVESAYGDPVVQQHHMRPVIPS
                     LATLAWAEPRRRDYWEKELINALTIIQRGWSTPAEMIGSWAGAMGHTQWMPEVWLHVG
                     IDYDHDGKISPFGPPDDALASTARYFIERGKYRRGEHWGYEVRMPAKMKSGGSRTYAA
                     WQALGVTRADGEAFPQPKATARPWAPVPGGPAFLLGPNFFAVRSYNPSMNYTLSLVHL
                     GDRCVGGEPFVQAFPGAERTPTLAEVQEIQRRLTALGFDTGGADGRAGTETMLAVQKF
                     QRKVGMEPADGYPGIKLLARLRQGL"
     gene            4664..>4889
                     /locus_tag="VNY79_09975"
     CDS             4664..>4889
                     /locus_tag="VNY79_09975"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72818.1"
                     /translation="MDQVLERHSAPEAVETIEAPLNYIVNNGQKLFTETGGPGGLDRR
                     SGGTVDPRQVVIHNGRPHVQEFALERDGFRF"
BASE COUNT          866 a         1621 c         1626 g          776 t
ORIGIN      
        1 gccgtaggcg tgaaagccct cggagacttc ggcgaacagc atgtcctcac gcgccgctct
       61 gccggcgccg gtgacccccg acttggcgtc gatcacgatc tcgtcggcat cgatcgcctt
      121 ggccttgagg agcgggatga gcgcaagctc ggcgcaggtc gtgtagcagc cgggattggc
      181 gacgaggcgg gccgccttga tctcgcgccg gtagatttcg gtcaggccgt acacggcctc
      241 ctgttgcagc tccagcgctg catgcgcatg gccgtaccag cgcgcataag cggccgggtc
      301 ggcgagacgg aagtcggccg agagatcgac gatcttcgtg cccggcgcgc gcgcgaccag
      361 gtccttgatc acctgctgcg tcgtcccgtg tggcagcgcg cagaagacga gatcgagctt
      421 gagcgccgcc caatcggcgg cgtcgagcgc cgtgagcggc ggcaaccggt acggcgagaa
      481 ttgcggaaac acatcggcca tggcctgccc ggcccggcgg tcggccgtga gcagagcaat
      541 cgcgacgtgc ggatgagcga tgagcaggcg aacaagctcc gccccggtat atcccgaggc
      601 gccaagcacg ccgatcttcg cattctgttt ttgcgcggac atgattcaac ccttgcgacg
      661 gtttcttctg gcttgaacga caaagccgaa atccgcgggg cgatgtgaga ggagagtgcc
      721 gcggaaccgg cggcacggag ctttacgcgc gaacgcgcac ccgtgccatg tcgccacggc
      781 ggcgacgcat tgcgatggca cgggtcatcg gcctgacgat cttggatgac cggatcatgg
      841 cggccatata gaggcactgc ccaatagcgt caatgcgccg acgcggcggt ccgacttcga
      901 cgggctcatg cttttgccgg cgccatggca tagtcggaag ttgattcgct gcccccagcc
      961 gcgcccatga gggagaagtc gcctttccga gtgtgcatga atcatgagtt cgcatgggaa
     1021 agattgaaaa aataacgaag acgacgccga acgcgcccga cctgttcgcg agcctgcctg
     1081 aatcgcgcgg cggggcgacc cgcggccgca gcgcccgcgc tggtcgcgcc tccgcgcgcg
     1141 gcgcggcggc tgagtccggc tacaccgcac gccacatcga ggtcctggaa gggctcgagc
     1201 cggtgcgccg ccgtccgggc atgtatatcg gcggcaccga tgagaaggcg ctccaccacc
     1261 tgttcgccga agtgatcgac aacgccatgg atgaggcgct cgccggccat gccgactgga
     1321 tcgaagtcga gatggccacg gacggattcg tcaccgtcac cgacaacggc cgcggcattc
     1381 cggtcgatcc gcacccgaaa tttccaaaaa aatctgcgct tgaagtgatc atgtgcacgc
     1441 tgcatgccgg cggcaaattc gattcgaaag tctacgagac ttccggcggg ctgcacggcg
     1501 tcggcgtttc ggtcgccaat gcgctttccg agcgcatgga ggtcgaggtc gcgcgcggcc
     1561 aaaagcttta tcgaatggcg ttcgagcgcg gcaagccgaa gagcaaattg caggacggcg
     1621 gcaaggcgcc gaaccgccgc ggcaccaagg tgcgcttccg ccccgacccc gagatcttcg
     1681 gcgccaaggc gcacttccgg ccggagcgcg tgttcaagat gacgcgctcg aaagcgtacc
     1741 tcttcggcgg cgtcgagatt cgctggtcgt gcacgaagga gttgctgcgc ggtgtcgaca
     1801 acgtgccgga gcaggcgacc ttccacttcg ccgatgggct cagggattac ctctcggaga
     1861 cgcttgccgg tacgacgctg gtgcatccgg atacattcac cggcagcgcg ggcaagaccg
     1921 gcgcgcatgg cggcgtgcaa tgggccgtgg cgtggtcagc cgacgccgac ggcttcctca
     1981 actcgtactg caacaccatc ccgacccctg acggcggcac gcatgaatcg ggcgtgcgcg
     2041 cggcgttgct gcgtggcctc aaggaccacg ccgaacgcgt cggccagggc aagcgcgcgg
     2101 ccgcgatcac cagcgaggac gtgatggtcg gcgccgcggc catgctctcg gtcttcatcc
     2161 gcgaaccgga attccagggc cagaccaagg accgcctcgc caccgccgag gcgcaacgca
     2221 tcgtcgagca ggcgatcaag gaccccttcg accattggct cgccggcaat ccgctgcagg
     2281 cgaacaagct gttcgacttc gtcctcgaac gcgccgaaga gcgcatccgc cgccgccagg
     2341 aaaaggagat tgcgcgcaag accgccgtaa agaaactccg cctcccggga aaacttgccg
     2401 actgcaccaa cgcggccgcc gaaggttccg agctcttcgt cgtcgagggc gattccgccg
     2461 gcggcaccgc gaagcaggcg cgcgaccgcg ccagccaggc agtgctgccg ctgcgcggaa
     2521 agattctcaa cgtcgcctcc gccgggcagg agaagctcgc gcagaatcag cagctcgccg
     2581 acctcgtgca ggcgctcggc tgcggcaccg gcgcgcacta ccgcgacgag gatctacgct
     2641 acggcagggt agtgatcatg accgacgccg atgtcgacgg cgcccacatc gcctcgctgc
     2701 tcatcacctt cttctaccgg cagatgccgc agctcatcga caagggtcac ctctatctcg
     2761 cagtgccgcc gctctatcgg ctgagccatg gcggcaagat tttctatgcc cgcaacgaag
     2821 cccatcggga tgaactcctg cgcagggagt ttcatgccaa cgccaaggtc gagatcagcc
     2881 gcttcaaggg gctcggcgag atgatggcgc cgcagctcaa ggagaccacc atggacccga
     2941 agaagcgcat gctccttcgc gtcgtcctcc tcgccgatga tcgccaggac acggcgaatt
     3001 cggtggagcg gctgatgggc acgaaggccg aggcgcgttt cgccttcatc caggagcgcg
     3061 ccgagttcgc ggacgaggaa tcgctggacg tctgacggat cggcggggcc gcggaggatt
     3121 gcttcgctgc gcgacgattt tacccctcac ccggctcgca ctctcgcgtt gctcgatgct
     3181 tgcgacctct cccgcaaggg cgagggaagg tttatgcgaa atcatcgacc agggtcacaa
     3241 accctggcgc aggcgggcga gcagcttgat gccggggtag ccgtcggccg gctccatgcc
     3301 gaccttgcgc tgaaactttt gcactgcgag catcgtttcg gtgccggcgc ggccatcggc
     3361 cccgccagta tcgaagccaa gggccgtgag gcggcgttga atctcctgca cttcggcgag
     3421 cgtcggcgtg cgctcggctc ccggaaatgc ctgcacgaac ggctcgccgc cgacgcagcg
     3481 gtcgccgaga tggacgagcg aaagcgtata gttcatcgac ggattgtagc tgcgcacggc
     3541 gaagaaattc ggcccgagca ggaaggccgg cccgcccggc accggggccc acggacgcgc
     3601 ggtcgccttc ggctgcggaa aagcttcgcc gtcggcgcgg gtcacgccga gcgcctgcca
     3661 ggcggcatag gtgcgcgagc cgccgctctt catcttcgcc ggcatgcgca cctcgtagcc
     3721 ccaatgctcg ccgcggcggt atttgccgcg ctcgatgaaa tagcgcgccg tcgatgcgag
     3781 cgcatcgtcg ggcgggccga acggcgagat cttgccgtcg tggtcgtagt cgatgccgac
     3841 atgcagccac acctccggca tccactgggt gtggcccatc gcacccgccc acgagccgat
     3901 catttccgcc ggcgtgctcc agccgcgctg gatgatggtc agcgcgttga tcagctcctt
     3961 ctcccaatag tcgcggcggc gcggctcggc ccaggcgagc gttgccagcg aagggatgac
     4021 cggccgcata tggtgctgct gcacgacagg atcgccgtac gccgactcga cgccccagac
     4081 cccgagcatg accgagcgct cgactccgaa atccttctcg atgcgggaga acagcgctgc
     4141 gtactcattc gccttctcct tgccggcaat gacgcgccag tcggacacgc ggcgattgag
     4201 atattgccag atctgctcgt tgaactcggg ctgagtgcgg atcgccgcaa ggccggtggt
     4261 gtcggggcgc agcccgtcca tggcgcggtc gtaggtctcc ccgctgatgc cgcgggcaag
     4321 ggccttggcg cggaagcgcg caacccattg cgcgaagtcg ccggcggccg gcgccgcagt
     4381 cgcgggagcc atgagcgccg ctgccgcggc gaacgccagc ccgagcgact cgcggcggct
     4441 cggctttgcg tcgcgagcgg gacgatgggg gacccgggat gtttgcatgc tggatattcg
     4501 ccaggcgccg agccgcaatt gaggccgcat gaccgcatga ccatgcaccg gcggctcgat
     4561 cggttcgggt cggcccgcgt gccctctttt tcggcttcgg ccagcagcct atcttatgag
     4621 cgagccggcg ttcaatcgcc ccctctttgc gaaggagttg gcaatggatc aggtcctcga
     4681 aaggcactcc gcacccgaag cggttgagac gatcgaggcg ccgctcaact acatcgtcaa
     4741 caacggccaa aagctgttca ccgagaccgg cgggcccggc ggcctcgacc ggcgcagcgg
     4801 cgggacggtc gatccgcggc aggtggtcat ccacaacggc cggccacacg tgcaggagtt
     4861 cgcactcgag cgtgatgggt tccgcttcg
//
LOCUS       DATMQB010000352         9219 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2023567, whole genome shotgun sequence.
ACCESSION   DATMQB010000352 DATMQB010000000
VERSION     DATMQB010000352.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9219)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9219)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9219
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2023567"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..771
                     /locus_tag="VNY79_09980"
     CDS             <1..771
                     /locus_tag="VNY79_09980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX72819.1"
                     /translation="VGAGSIGPGWGNGKATAVAFAREGARLFCADINPAAAAETAAII
                     KGEGGDALAHGADASKAADVAAMIEACASAYGRIDVLDNNVGIAELGGVVEVPEAAWD
                     KVFAVNLKSAYLTMKHVIPLMERQGGGSIINISSVASIRCTGVPYATYYATKAALNHL
                     TRTTAVEYAEKRIRVNAILPGLMKTPMVEKSAGLAQNYAAGDVEEMWRVRDRQVPMGF
                     GGSAWDVAWAAVYLASDESRYVTGIELVVDGGLTLKYA"
     gene            814..2904
                     /locus_tag="VNY79_09985"
     CDS             814..2904
                     /locus_tag="VNY79_09985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009032172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin oxidoreductase family protein"
                     /protein_id="HWX72820.1"
                     /translation="MNQTVRPRIAASACPHDCPSTCALEVEIFGERTIGRVRGAEDNA
                     YTAGVICAKVARYAERVHHPDRLTRPLRRTGAKGSGEFAPVSWEDALDIVAEAFIRAE
                     QAHGSEAVWPYYYAGTMGFVMRDGINRLRHAKKYSGFHSTICVNPAWAGFIAGTGKLA
                     GSDPREMAKSDLVVIWGTNAVNTQVNVMTHATRARKERGAKLAVVDVYMNATMRQADL
                     PMLIRPGTDGALACAVMHCLFRDGKADWNYLDRYTDAPRELEEHLRSRGPAWASRITG
                     CPVDTIEAFARLIGETKRAYFRLGYGFSRSRNGAANMHAASCIAAVTGAWLHEGGGAF
                     HHNDAIFHLNKSAIEGSDLRDPSIRMLDQSRIGAILTGDEDALRGGPPVTALFTQNTN
                     PVAVAPDQETVKRGFARDDLFVCVHEQFMTDTARAADIVLPATMFVEHDDLYLAGGSQ
                     YILLGPKLIEPPGECRSNHDVICALAKRLGAEHPGFAMTPRELIDVTLQKSGWGTLAD
                     IEANRWIDCQPDFATAHYLNGFGYADGKFRFKPNWPEVPFTRAHRTVTSPMPRLPDHW
                     DVIEEADAEHPFRLATSPARGFLNSTFTETPTSLAKERRPEVMIHPDDAAPLTVADGD
                     LVALGNRRGTVRIHARLFDGVRRGVLIAESLWPNKAYADGRGINTLTGSDAIAPFGGA
                     AFHDNKVWLRKAAG"
     gene            complement(2915..3403)
                     /locus_tag="VNY79_09990"
     CDS             complement(2915..3403)
                     /locus_tag="VNY79_09990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HWX72821.1"
                     /translation="MTTTIRLQREAFDIAAEVAKLTGGRTDIGAVVTFTGVCRADENG
                     KPIAALTLEHYPGMAEAEIVRHVEEARARWPLLGVTVIHRHGRLTPGEVIVLVVTASS
                     HREAAFAAAAFLMDYLKTRAPFWKRVETVDGTAWVDAKAADDAAAERWAAPPERRREA
                     AK"
     gene            complement(3428..3679)
                     /gene="moaD"
                     /locus_tag="VNY79_09995"
     CDS             complement(3428..3679)
                     /gene="moaD"
                     /locus_tag="VNY79_09995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0006777 - Mo-molybdopterin cofactor
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin converting factor subunit 1"
                     /protein_id="HWX72822.1"
                     /translation="MKLLYFAWLRERIGKAEEQVDPPAGVDTVGELVAWLARRDEQYA
                     YAFENPKVIRAAIDRSHVRADAKIAGASEIAFFPPMTGG"
     gene            complement(3676..4296)
                     /gene="pgsA"
                     /locus_tag="VNY79_10000"
     CDS             complement(3676..4296)
                     /gene="pgsA"
                     /locus_tag="VNY79_10000"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008444 -
                     CDP-diacylglycerol-glycerol-3-phosphate
                     3-phosphatidyltransferase activity [Evidence IEA];
                     GO_process: GO:0008654 - phospholipid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HWX72823.1"
                     /translation="MNSTTTTTGQLRVHPLALPNILTYGRIVAVPVVVGCMFSQSILD
                     GGLWLRWVALVIFVGAAISDFLDGYFARAWAQQSSLGRMLDPIADKLLVSSSLLMLAA
                     EETIHGWALLAAVVILCREILVSGLREYLAELRVSVPVTRLAKWKTTLQLVAVGFLIA
                     GEAGDAVVPVVTKVGIALLWLSALLTLYTGWDYLQAGLHHLTKEDA"
     gene            complement(4406..6550)
                     /gene="uvrC"
                     /locus_tag="VNY79_10005"
     CDS             complement(4406..6550)
                     /gene="uvrC"
                     /locus_tag="VNY79_10005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HWX72824.1"
                     /translation="MSAPKKDVEPELDIAEDDEEPSLPEVAETAGERGEEEEGGSLAD
                     GRAAILRYAKNAPAQPGVYRMIDARGDVLYVGKAKNVKNRVRAYARPAGLDTRIERMI
                     AATRALEFVVTRTETEALLLEANMIKRLRPRFNVLLRDDKSFPYILITTDHWAPQIFK
                     HRGARTRPGHYFGPFASVWAVNRTINALQRAFLLRSCSDPFFESRTRPCLLHQIKRCS
                     APCTNEVDFAEYSVLVREAVAFLSGRSKAVKDELAAEMEKASFALDFEHAAVYRDRLA
                     ALSAIQSHQGVNPRGVEEADVFALHQQGGFACVEVFFFRTGQNWGNRAYFPRADKSLT
                     PAEILAAFLAQFYDDKPCPRLILASHEIDDRALLAEALSTKSGHRIEVVVPQRGEKKD
                     LIEHALANAREALGRKLAETSSQEKLLRQLAETFGLPRVPRRIEVFDNSHIQGTNAVG
                     AMIVAGPEGFRKKDYRKFNIRAVDLTPGDDFAMMREVLERRFKRLLVEAPPPLHLPAA
                     GEGGGEPPGSPDTNGVAAGSAGPSSALVAPGPPLSQEEREGVAEGGEPADDEQAESPW
                     PDLVLIDGGQGQLSAAREVLAALGVAVPLVAIAKGPDRDAGRETFFLPDRNSFKLPPR
                     DPVLYFVERLRDEAHRFAIGSHRARRMRDLREAGLQEIAGIGPARKRALLHHFGTLKA
                     IERASVTDLMQVDGISAETARRIYGFFHEGAA"
     gene            6901..7509
                     /locus_tag="VNY79_10010"
     CDS             6901..7509
                     /locus_tag="VNY79_10010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein"
                     /protein_id="HWX72825.1"
                     /translation="MRTILGAAFSLAAAGIAAAADFPANNYYTAPAPLSAGSWVGPYL
                     GANVGYELATVDNNPTKPSGIAGGIEAGYNWQRGQFVFGGEADFQLSGADATVAPWQF
                     SNPWFGTVRGRAGVAFNNVLVYGTAGLAYGDLRVDTAGLTESHASFGWTAGAGVEVGF
                     TPRWSAKAEWLYLDLMDRGFSVTGTNNGLAANLIRFGVNYHF"
     gene            7747..8412
                     /locus_tag="VNY79_10015"
     CDS             7747..8412
                     /locus_tag="VNY79_10015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018317912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein"
                     /protein_id="HWX72826.1"
                     /translation="MKRLFLACLGLAVLASAAGAADLGIRPAPYYKGPPPAFIPPYTW
                     SGFYIGVNGGGGWGHSNWDTAGGISTSGGLVGGTVGYNYQYDRAVFGVEGDIDWANIN
                     GGTTTAGCPLGCQTKDTWLSTVRGRLGYAAGRFMPFVTGGGAFGDIRASTPALAGGNT
                     TNAGWTIGAGIEFALVGNWTAKAEYLYVDLGKLSCGAGCGAPVDNVSFTANIVRGGIN
                     YRF"
     gene            complement(8485..9096)
                     /locus_tag="VNY79_10020"
     CDS             complement(8485..9096)
                     /locus_tag="VNY79_10020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HWX72827.1"
                     /translation="MMILRSAPPSPFGRKVCIALSLLGLDRDVRVEAADTVDPHDSLR
                     EQNPLGKIPVLIAEDGSTFYDSRVILEYLDDRAGGGKIIPRDAGPRFAALRLQALCDG
                     ILDASILTVYEGRWRAAEKREPKWLEHQAGKVMRAFAVLEAAPPALGAAIPHVGQIAL
                     ACALGYRDLRFGGDVRAQCPRLVAWLEEFAARVPAYAATTATV"
BASE COUNT         1561 a         3127 c         3011 g         1520 t
ORIGIN      
        1 gtcggcgccg gttcgatcgg gccgggctgg ggcaacggca aggcgacggc ggtcgcattc
       61 gcgcgcgagg gcgcgcgctt gttctgcgcc gacatcaatc ccgccgccgc cgcggaaacc
      121 gcagcgatca tcaagggcga aggcggggac gcgcttgcgc acggcgccga tgcgagcaaa
      181 gccgccgacg tcgcggcgat gattgaggcc tgcgcgtcgg cctacggccg catcgacgtg
      241 cttgacaaca atgtcggcat cgccgaactc ggcggcgtgg tcgaggtgcc ggaggcggct
      301 tgggacaagg tcttcgctgt caatctcaag agcgcctatc tcacgatgaa gcacgtgatc
      361 ccgctgatgg agcggcaagg gggcggctcg atcatcaaca tctcttcggt cgcctcgatc
      421 cgctgtaccg gggtgcccta tgcgacctat tacgcaacca aggccgcgct caaccacctg
      481 accaggacca cagcggtcga atatgcggag aagcgcatcc gggtgaacgc gatcctcccc
      541 gggctgatga agacgcccat ggtcgagaag agcgcggggc tcgcgcaaaa ctacgccgcc
      601 ggcgatgtcg aggagatgtg gcgggtgcgc gaccgccagg tgccgatggg attcggcggg
      661 agtgcctggg acgtcgcctg ggcggcggtg tatctcgcca gcgacgagag ccgctacgtc
      721 accggcatcg aactcgtggt cgacggcggc ctcacgctca aatacgcctg aggcgtggct
      781 gtatcgtcaa ccatgcttct gtatagtgaa gccatgaatc agaccgtccg cccccgcatc
      841 gctgcctcgg cttgtccgca cgactgccca tcgacctgcg cgctcgaggt cgagattttt
      901 ggcgagcgca ccatcggccg tgtccgcggc gccgaggaca acgcctatac ggccggcgtg
      961 atctgcgcca aggtcgcgcg ctacgccgag cgcgtccatc atcccgaccg cctcacgcgt
     1021 ccgctgcggc gcaccggcgc caagggcagc ggcgagttcg ccccggtgag ctgggaagat
     1081 gctctcgaca tcgtcgccga agcgttcatc cgcgcggagc aggcgcacgg ctccgaggcg
     1141 gtgtggccgt actactacgc cggcacgatg ggcttcgtca tgcgcgacgg aatcaaccgc
     1201 ctgcgccacg ccaagaaata ttccggcttc cattcgacca tctgcgtcaa cccggcctgg
     1261 gccggcttca tcgccggcac cggcaagctc gccgggtctg atccgcggga aatggcgaag
     1321 tcggacctgg tggtgatctg gggcaccaat gcggtgaaca cccaggtcaa cgtgatgacg
     1381 cacgcgacgc gcgcccgcaa ggagcgcggc gccaagctcg ccgtcgtcga cgtgtacatg
     1441 aacgcgacca tgcggcaggc cgatctgccg atgctgatcc ggcccggcac cgatggcgcg
     1501 ctcgcctgcg cagtgatgca ctgcctgttc cgcgacggca aggcggactg gaattacctc
     1561 gaccgctata ccgatgcgcc gcgcgaactc gaagagcatt tgcgcagccg cggcccggcc
     1621 tgggcgtcgc gcatcaccgg ctgcccggtg gacacgatcg aagccttcgc ccgcctcatc
     1681 ggcgagacca agcgcgccta tttccgcctc ggctacggct tctcgcgctc gcgcaacggc
     1741 gccgccaaca tgcacgcggc aagctgcatc gcggcggtga ccggcgcctg gctccacgaa
     1801 ggcggcggcg ccttccacca caacgacgcg atcttccacc tcaacaagag cgcgatcgaa
     1861 ggcagcgacc tgcgcgaccc ttcgatccgc atgctcgacc aatcacgcat cggcgcgatc
     1921 ctcactggcg acgaggacgc gttgcgcggc gggccgccgg tgacggcgct cttcacccag
     1981 aacaccaatc cggtcgccgt cgcccccgat caggagacgg tcaagcgcgg ctttgcccgt
     2041 gacgatctgt tcgtgtgcgt gcacgagcag ttcatgaccg acaccgcgcg cgccgccgat
     2101 atcgtcctcc ccgccaccat gttcgtcgag cacgacgacc tctatctggc gggcggcagc
     2161 caatacatcc tgctcgggcc gaagctgatc gagccgcccg gcgagtgccg atcgaaccac
     2221 gacgtgatct gcgcgctggc caagcggctc ggcgccgagc acccgggctt cgccatgacg
     2281 ccgcgcgagt tgatcgacgt cacgctgcag aagtccggct ggggcacatt ggccgacatc
     2341 gaggccaacc gctggatcga ttgccagccg gatttcgcta cggcgcacta tctcaacggc
     2401 ttcggctacg cggacggcaa gttccgcttc aagccgaact ggccggaagt cccgttcacg
     2461 cgcgcgcacc gcaccgttac ctcgccgatg ccgcggctgc ccgaccattg ggacgtgatc
     2521 gaggaggcgg atgccgagca tccgttccgg ctggcgacgt cgccggcgcg cggtttcctc
     2581 aactcgactt tcaccgaaac gccgacctcg ctcgccaagg agcggcggcc cgaagtgatg
     2641 atccatcccg acgatgccgc tccgcttacg gtcgcggacg gcgacctggt cgcgctcggc
     2701 aaccgccgcg gcacggtcag gattcacgcc cggctgttcg acggcgtgcg ccgcggcgta
     2761 ctgatcgcgg aatcgctctg gcccaacaaa gcctacgccg acggccgcgg catcaacacg
     2821 ctcaccggct ccgacgcgat cgccccgttc ggcggcgccg cgttccacga caacaaggtc
     2881 tggctgcgca aagcggcggg ctgatcgctc attgtcattt cgcggcttcg cgccgccgct
     2941 ccggcggcgc cgcccagcgc tccgccgcgg cgtcgtcggc cgccttggcg tcgacccacg
     3001 ccgttccgtc caccgtctcc acccgtttcc agaacggcgc ccgcgttttc aggtaatcca
     3061 tgagaaacgc cgccgcggcg aacgccgcct cgcgatggct cgacgcggtc accaccagga
     3121 cgatgacctc gccgggcgtg agccggccgt gccgatgaat cacggtaaca ccgaggagcg
     3181 gccagcgcgc gcgcgcctcc tcgacgtggc ggacaatctc ggcctcggcc atgccgggat
     3241 aatgttcgag ggtcagcgcc gcgatcggct tgccgttttc gtcggcgcgg cagacgccgg
     3301 tgaaggtcac gaccgcgccg atgtcggtgc gcccgccggt gagcttcgcc acttcggcgg
     3361 cgatatcgaa ggcctcgcgc tgcaggcgta tggtcgtggt catcggacgc gctttaacac
     3421 cgctcgttca cccgccagtc atcggcggga aaaatgcgat ctcgctcgcg cccgcgatct
     3481 tggcatcggc gcgcacatgg ctgcggtcga tcgcggcgcg gatcactttc ggattctcga
     3541 aggcgtaggc atattgttcg tcgcgccgcg ccagccaggc cacaagctcg ccgacggtgt
     3601 cgacgccggc cggcggatcg acctgttcct ccgccttgcc gatgcgctcg cgcagccagg
     3661 cgaagtagag aagcttcacg cgtcctcctt ggtgagatga tgcagacccg cctgcaggta
     3721 atcccaaccg gtgtagagcg taagcagggc ggagagccat aagagcgcga tgccgacttt
     3781 ggtgaccacc ggcacgacgg cgtcgcccgc ctcgccggcg atgaggaagc cgacggcgac
     3841 gagctgcagc gtggtcttcc atttggcgag ccgggtcacc ggcacgctca cgcgcagctc
     3901 ggcgagatat tcacgcaaac cggagaccag gatctcgcgg cagaggatga cgaccgccgc
     3961 cagcagcgcc cagccatgga tcgtttcttc cgcagcgagc atcaacagcg aggatgagac
     4021 caggagcttg tcggcgatcg ggtcgagcat gcggccgagc gaggattgct gggcccacgc
     4081 acgggcaaaa tagccgtcga ggaaatcgct gatcgccgca ccgacgaaga tcaccagcgc
     4141 aacccagcgc agccaaagcc cgccgtcgag gatgctctgg ctgaacatgc agccgaccac
     4201 gaccggcacc gcgacgatgc ggccgtaggt caggatgttg ggcagcgcga gcggatgcac
     4261 gcgcagctgc ccggtcgtcg tcgtagtcga attcataccc gcaccatagc gccgctgcac
     4321 ccatgccgac aggcccctct tccacatgcc tgcctggcgg tgtggacagt ggccgggagc
     4381 gccgcgacac tatcgcgcgc cccgctcatg ccgccccctc gtggaaaaac ccataaattc
     4441 gtcgcgccgt ttcggcgctg ataccatcga cctgcatcaa atctgtgacc gaggcgcgct
     4501 cgatcgcctt gagcgtgcca aagtgatgca gcagcgcgcg cttgcgcgcc gggccgatgc
     4561 cggcgatttc ctgcaggccg gcctcgcgca ggtcgcgcat gcggcgtgcg cggtgcgagc
     4621 cgatcgcgaa acggtgcgcc tcatcgcgca gccgctcgac gaaataaagc accggatcgc
     4681 gcggcggcag cttgaacgag ttccggtccg gaagaaagaa agtttcgcgg ccggcgtcgc
     4741 gatccggtcc cttggcgatg gcaaccagcg gcaccgcgac gccgagcgcc gcaagcacct
     4801 cgcgcgccgc gctgagttgc ccttgcccgc cgtcgataag tacgaggtcc ggccagggcg
     4861 actcggcctg ctcgtcgtcc gccggctcgc cgccctccgc cacaccttcc cgctcctctt
     4921 gcgaaagagg cggccccggc gcaacgaggg ctgatgatgg cccggcgctt cccgccgcga
     4981 cgccgttcgt gtccggcgag ccgggcggct cgccgcctcc ctctcccgcg gcgggcaagt
     5041 gcaacggcgg cggcgcctcg acgagcagcc gtttgaagcg acgctccaaa acctcgcgca
     5101 tcatggcgaa atcgtcgccg ggagtgaggt cgacggcacg gatgttgaat ttccggtagt
     5161 cctttttgcg aaagccttcc ggccccgcaa cgatcatggc gccgaccgcg ttcgtgccct
     5221 ggatatggct gttgtcgaac acctcgatgc gccgcggcac gcgcggcaat ccgaaggttt
     5281 ccgccagttg gcgcagcagc ttctcctgcg aggaggtctc ggcaagcttg cggccgagcg
     5341 cctcgcgcgc attggcaagc gcgtgctcga tcaagtcctt cttctcgccg cgctgcggca
     5401 ccacgacttc gatgcggtgg ccgctcttgg tgctgagcgc ctcggcgagc agcgcgcggt
     5461 cgtcgatttc gtgcgacgcc aggatcaggc gcggacacgg cttgtcgtca tagaactggg
     5521 cgaggaacgc ggccaaaatc tcggcgggcg tcagcgattt gtcggcccgc ggaaaatagg
     5581 cacggttgcc ccagttctgc ccggtgcgga agaagaacac ctcgacgcag gcgaagccgc
     5641 cctgctgatg cagggcaaag acgtccgcct cctcgacgcc gcgcggattg accccctggt
     5701 gcgattgaat cgccgagagc gcggccaagc ggtcgcggta gacggcggca tgctcgaagt
     5761 cgagcgcgaa cgaggccttt tccatctcgg cggcgagctc atccttgacc gccttgctgc
     5821 ggccggagag gaaggcgacg gcctcgcgca ccagcaccga atactccgcg aagtcgacct
     5881 cgttggtgca cggcgccgag cagcgcttga tctgatgcag caggcacggc cgggtgcggc
     5941 tctcgaagaa cgggtcgctg cacgagcgca gcaggaacgc gcgctgcagc gcgttgatcg
     6001 tgcggttgac ggcccagacc gaggcgaacg gtccgaaata gtggcccggc cgcgtgcgcg
     6061 cgccgcggtg cttgaagatc tgcggcgccc aatgatcggt cgtgatcaga atatagggaa
     6121 acgatttgtc gtcgcgcagc agcacgttga agcgcggccg caaccgcttg atcatgttcg
     6181 cttcgagcag cagcgcctcg gtctcggtgc gggtgacgac gaattcgagc gcgcgcgttg
     6241 ccgcgatcat ccgctcgatg cgagtgtcga ggccggccgg acgcgcatag gcgcgcaccc
     6301 ggttcttcac gttcttcgcc ttgccgacgt agagcacgtc gccgcgcgcg tcgatcatcc
     6361 gatagacgcc gggctgcgcc ggcgcgttct tggcatagcg gaggatggcg gcccggccgt
     6421 cggcgagcga accgccctcc tcctcctcgc cgcgctcgcc ggcggtctcc gccacctccg
     6481 gaagggacgg ttcttcatcg tcctcggcga tgtcgagttc cggctcgacg tctttcttcg
     6541 gcgcgctcat cggttcgatt tgctgaaaat acccttaccg cgaaggtagg gtctgggagc
     6601 cccgcgggcc agtctccgcg ccttgagccg cgccccgttt cgccggctgg cgccggcgcg
     6661 ccgagcccgg cgggccccac gaggcaacct gcggcgtgcc cggtcgggcg cttccgtgcc
     6721 tgccgtcgtg tcaagcattc cttaaggata ccagctcggt attacttagc gttcatgacc
     6781 gcttaactta aacatcccga taaattcgaa ctaacacgca acggacccgg gccgttgccc
     6841 cgcacgtttc ctttcgccag ctcggtcctt ttattccgcc cgatcgtctc ggaggtcagc
     6901 atgaggacaa ttcttggcgc agccttctcg cttgcagcgg ccggcatcgc cgcagcggcc
     6961 gatttccccg ccaacaacta ctacacggcg ccggcaccgt tgagcgccgg gagctgggtc
     7021 ggcccgtatc tcggcgccaa tgtcggctat gaattggcga cggtggacaa caatccgacc
     7081 aagccgtccg gcatcgccgg gggcatcgag gcgggctaca attggcagcg gggacaattt
     7141 gtcttcggcg gcgaagccga tttccagctc tcaggcgcgg atgccacggt ggcgccttgg
     7201 caattttcca atccgtggtt cggcaccgtg cgcggccgcg ccggggtcgc cttcaacaac
     7261 gtccttgtct acggcaccgc cggcctcgcc tacggtgatt tgcgcgtgga caccgcaggc
     7321 ctgacggagt cgcacgccag ctttggctgg accgccggcg ccggggtcga ggtgggcttt
     7381 acgccgcgct ggtcggcaaa agccgaatgg ctctatctcg atctgatgga tcgcggcttc
     7441 tcggtgaccg gcaccaataa cggcctcgcc gccaacctga tccgtttcgg cgtcaactat
     7501 catttctgag ctgacgaccg cacggccgat ttcccgcccg ggggtacggc cgccgccctc
     7561 aatatttgtg gttatttacc aatcatctcg tcaattaaat aataatctac tataattatg
     7621 acgaggtaag gtcaattctc gccgcaatgt ggtctataaa gagaaaacgt ctgtgtcttt
     7681 tctacactag acgctacgat gatcgtgaat actataccgc ctcctgcgcg gaacggaggt
     7741 ccgacaatga agcgtttgtt tcttgcgtgt ttaggcttgg cggtcttggc gagtgcggcg
     7801 ggggcagccg acctcgggat acggccggcg ccctactaca aaggaccgcc accggcattc
     7861 atcccgccct atacctggag cggattctac atcggcgtga acggcggcgg tggctggggg
     7921 cactcgaact gggatacggc cggcggcatc agcacgtctg gcggtctggt cggcggcacg
     7981 gtcggttaca attaccagta cgaccgcgcg gttttcggcg ttgagggcga tatcgactgg
     8041 gccaacatca atggcggcac gacaactgcc ggctgcccgc tcggctgcca gaccaaggat
     8101 acgtggctct cgactgtgcg cgggcgcctc ggctatgcgg ccggccgctt catgcccttc
     8161 gtcaccggcg gcggcgcgtt cggcgacatc cgcgcttcca cgccggcgct cgccggcggc
     8221 aacacgacca atgccggctg gacgatcggc gcgggcatcg agttcgcgct ggtcggcaac
     8281 tggacggcca aggccgagta tctgtatgtc gatctcggca agctgagttg cggcgccggc
     8341 tgcggtgcgc cggtcgacaa cgtctcgttc accgccaaca ttgtccgcgg tggcatcaac
     8401 tatcggttct gattgccgcg cacggcggca caagcgctcg aaggcaaaag ccccggggaa
     8461 ttcctcgggg ctttttcttg acgttcacac ggtcgcggtg gtggcggcgt aggccggcac
     8521 gcgcgcggcg aactcctcga gccaggcgac tagacgcgga cattgggcgc ggacatctcc
     8581 gccaaagcgg aggtcccgat agccaagcgc acaggcgagc gcgatctggc cgacatgggg
     8641 gatcgcggcg ccgagcgccg gcggggcagc ttcgagcacc gcgaacgcgc gcatcacttt
     8701 gccggcctga tgctcgagcc acttcggctc gcgcttctcg gccgcgcgcc agcggccttc
     8761 gtagacggtc agaatcgatg cgtcgagaat gccgtcgcag agcgcctgca ggcgcaacgc
     8821 ggcaaagcgc ggacctgcat cgcgcgggat gatcttgccg ccgccggcgc ggtcgtcgag
     8881 atattcaagg atcacgcgcg aatcatagaa cgtgctgcca tcctcggcga tgagcacggg
     8941 aatcttgccg agcggattct gctcgcgcag agagtcgtgc ggatcgacgg tgtccgcggc
     9001 ttcgacgcgt acatcgcgat ccaagccaag cagcgacagc gcgatgcaca ccttgcggcc
     9061 gaacggcgag ggcggcgctg aacgcaggat catcatcgat gcatcatcgg cgcaaatcgt
     9121 tggcggcgca acgtgcagac gacgatgacg gcgaggccgg cggctgcaga tctgcaaggc
     9181 atcagcaacg ccgtgcgcac tcgcacgttg ccgtcgcga
//
LOCUS       DATMQB010000353         4003 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2023697, whole genome shotgun sequence.
ACCESSION   DATMQB010000353 DATMQB010000000
VERSION     DATMQB010000353.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4003)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4003)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4003
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2023697"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(182..796)
                     /gene="grpE"
                     /locus_tag="VNY79_10025"
     CDS             complement(182..796)
                     /gene="grpE"
                     /locus_tag="VNY79_10025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014438800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000774 - adenyl-nucleotide exchange
                     factor activity [Evidence IEA];
                     GO_function: GO:0042803 - protein homodimerization
                     activity [Evidence IEA];
                     GO_function: GO:0051087 - protein-folding chaperone
                     binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HWX72828.1"
                     /translation="MTEQTARAEDAAALAEAAPLANQPGPTQPDPEAHAAELKDRLLR
                     TLAEMENLRKRTDREIADSRAYAVAAFARDVLGVADNMRRALDAISPELRASAESGVK
                     ALIEGVELTERELQKALEKNGVSQFTPRGEKFDPNVHQAMFEVPDAAVPAGSVVEVVQ
                     PGYMIGERMLRPALVGVSKGGPKTAPARGQAAVNDNAAKAAKDS"
     gene            complement(914..1999)
                     /gene="hrcA"
                     /locus_tag="VNY79_10030"
     CDS             complement(914..1999)
                     /gene="hrcA"
                     /locus_tag="VNY79_10030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HWX72829.1"
                     /translation="MASHDLPLVASQLSLAQLNERSREIFRRIVESYLATGEPVGSRN
                     LSRILPMTLSPASVRNVMSDLEQLGLVYAPHTSAGRLPTEFGLRFFVDALMQVGDLTE
                     RDRKAIEAQVAGSGQAKSVESVLTEASALLSGLSRAAGVVLTAKSNQRLKHIEFVRLE
                     PERALVVLVAEDGQVENRVLNIPVGLPTSALIEAGNFLNARIRGRTLPEVKAEIERRL
                     EEGQAELDALTQKIIAAGLASWSGGETDERKLIVRGQAHLLEDLKALADLERVRLLFD
                     DLETRRDVIDLLGRAEQAEGVRIFIGSENKLFSLSGSSTIVAPYHDASGHIVGVLGVI
                     GPTRLNYARIIPMVDYTAKVVSKLLAG"
     gene            2205..2918
                     /gene="rph"
                     /locus_tag="VNY79_10035"
     CDS             2205..2918
                     /gene="rph"
                     /locus_tag="VNY79_10035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011923431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004549 - tRNA-specific ribonuclease
                     activity [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HWX72830.1"
                     /translation="MRPSRRQPDELRPVSLERGVVKFAEGSCFVRFGDTHVLVTATLE
                     DRLPPWLKGQARGWITAEYGMLPRATLERTRREASAGRQNGRTVEIQRLIGRSLRSVV
                     DLKALGERQITIDCDVIQADGGTRTASITGAWIALYDCLAWMKTRQMIEHEVLRDHIA
                     AISCGVCSGVAVLDLDYAEDSQAETDANFVLTGSGNIVEVQATAEKLPFSEEQLTTLL
                     ALARKGVAKLIDLQKMAVM"
     gene            3014..3703
                     /gene="rdgB"
                     /locus_tag="VNY79_10040"
     CDS             3014..3703
                     /gene="rdgB"
                     /locus_tag="VNY79_10040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016462 - pyrophosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RdgB/HAM1 family non-canonical purine NTP
                     pyrophosphatase"
                     /protein_id="HWX72831.1"
                     /translation="MHRPLAGRLVIATHNNGKLTEMRDLLAPYGIDATSAGELDLAEP
                     EETGMAFRANARIKAEAAAKASGLPAFADDSGLAVDALGGEPGIHSARWAGPDRNFRR
                     AMELVEERLRERGATTPRQRKAHFVSALSIAWPDGHIEEFEGRVDGTLVWPPRGDKGF
                     GYDPIFLPDGHARTFGEMSSEEKHGLPPRGLGLSHRARAFRKLAEACLRSRPPSAAEA
                     GSRRDPGAGRP"
     gene            3700..>4003
                     /locus_tag="VNY79_10045"
     CDS             3700..>4003
                     /locus_tag="VNY79_10045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014438804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HWX72832.1"
                     /translation="MSGAPTTPPAAASETAFGVYIHWPFCLSKCPYCDFNSHVRHSGI
                     DEARFVRAFTTEIAAIAARVPGRTVSTIFIGGGTPSLMQPATVAAVLDAVARHWRIA"
BASE COUNT          670 a         1346 c         1332 g          655 t
ORIGIN      
        1 ggcgtgggcg gacatgaacg aagccggcgt caagaagatc cagtcgagcg atctcgcggt
       61 ctgagcaacc gcgcagttcg ggattccgaa agccgagtat aggctgcgat caaggatttc
      121 ccggttcgcc ggcaacggcc gccgcgccgg aatgatagtc aatgatctcg gcggactggt
      181 atcaagaatc cttggcggcc ttcgctgcgt tgtcattcac ggcggcctgc ccgcgtgcgg
      241 gagcggtttt ggggccaccc ttcgacacgc cgaccaacgc cggccgcagc atgcgctcgc
      301 cgatcatgta gccgggctgc acgacctcga cgacgctgcc cgccggtacc gccgcgtcgg
      361 gcacttcgaa catcgcctgg tggacattgg gatcgaactt ctcgccgcgc ggcgtgaact
      421 ggctcacgcc gttcttttcc agcgctttct gcaactcccg ctcggtaagc tcgacgccct
      481 cgatcagcgc cttgacgccg gactcggcgc ttgcgcgcag ttccggcgat atcgcgtcga
      541 gtgcccggcg catgttgtcg gcgacgccca gcacgtcgcg cgcaaatgcc gcaacagcgt
      601 aagcgcgcga gtccgcgatt tcgcggtcgg tgcgcttacg caggttttcc atctccgcca
      661 gcgtgcgcag cagcctgtcc ttgagctcgg cggcatgcgc ttccggatcg ggttgagtcg
      721 ggcccggctg attggctaac ggagcggcct cggcaagggc cgcggcgtcc tcagcacgcg
      781 cggtctgttc ggtcatatcc attcccatgg tctcgctgcc cggcatatca ggcgtcaaac
      841 cacaaaaatc aagcgccggg aacgggctgg ctatcagccc acgggaactt cggcggccgc
      901 cgataacgcc atatcagccg gccagcagct tgctgacgac cttggccgtg tagtccacca
      961 tcggaatgat gcgggcgtag ttgagccggg tcgggccgat cacgccgagg acaccgacaa
     1021 tgtggccgga cgcgtcgtgg tagggcgcga cgatggtcga ggaaccggag agcgagaaca
     1081 gcttgttctc cgagccgatg aagatgcgca cgccttcggc ctgctccgcc cggcccaaga
     1141 ggtcgatcac gtcgcggcgc gtttccagat cgtcgaacag gagccggacg cgctcgagat
     1201 cggcgagcgc cttgaggtcc tcgagcagat gcgcttggcc gcgcacgatc agcttccgct
     1261 cgtcggtttc gccgcccgac cagctggcga ggccggcggc gatgatcttc tgagtgagcg
     1321 catcgagctc ggcctggccc tcctcgagcc gccgctcgat ctcggccttg acctcgggca
     1381 gagtacggcc gcggatgcgg gcgttgagga aattgccggc ctcgatcagc gccgacgttg
     1441 gcaggccgac cgggatgttg agaacgcgat tttcgacctg gccgtcctcg gcgacgagaa
     1501 ccacgagtgc gcgctcgggc tcgagccgga cgaactcgat gtgcttcaat cgctggttcg
     1561 atttcgcggt cagcacgacg ccggcggcgc ggctgagccc ggagagaagc gcagacgctt
     1621 cggtcagcac cgactcgacc gacttggcct gacccgagcc ggcgacctgc gcctcgatcg
     1681 ccttgcgatc gcgctcggtc agatcgccga cctgcatcag ggcgtcgaca aagaaacgca
     1741 gcccgaactc agtcggcagc cgcccggccg aggtatgcgg cgcatagacg aggccgagct
     1801 gttccagatc ggacatgacg ttgcgcaccg acgccggcga cagcgtcatc ggcaggatgc
     1861 gcgacagatt gcgcgagccg accggctcgc cggtcgccag atagctctcg acgatccggc
     1921 gaaagatctc gcgcgagcgc tcgttgagct gagccaagct cagctggctc gcgaccaatg
     1981 gcagatcgtg gctggccaag gtgaactccc gtgctggcgc aagatttgtc catttgacgc
     2041 ctcggtttca agccgcatag gacggcgcaa ggaccgcagg cctcggcacg cgaacgcctc
     2101 ggcgacccct ggcacccttg tcggttctcc cgcccgcccg tacaagacgg ggcaccatct
     2161 gctttggctc gtgcggcgcc ggcgccgcag cgagggagaa ttttatgcgg ccgagccgcc
     2221 gacagcccga cgaattgcgc ccggtctcgc tcgagcgcgg cgtggttaaa ttcgcggaag
     2281 gatcgtgctt cgtccggttc ggcgacacgc atgtgctggt taccgcgacg cttgaggacc
     2341 gcctgccgcc ctggctcaag gggcaggcgc gcggctggat caccgccgaa tacggcatgc
     2401 taccgcgcgc cacgctcgaa cgcacacggc gcgaggcctc ggccggccgg cagaatggcc
     2461 gcaccgttga aattcagcgc ctgatcgggc gcagcctgcg ctccgtagtc gatctcaagg
     2521 cgctgggcga acggcagatc accatcgact gcgacgtcat ccaggctgac ggcgggaccc
     2581 gtaccgcttc catcaccggc gcctggatcg cgctctacga ctgtcttgcc tggatgaaga
     2641 cgcgacagat gatcgagcat gaggtgctgc gcgaccacat tgcggccatc tcctgcggcg
     2701 tgtgctctgg cgtcgcggtg ctcgacctcg actacgccga ggattcacaa gcggagaccg
     2761 acgccaattt cgtcctcacc gggtccggta acattgtcga ggtgcaggcg accgccgaga
     2821 agctgccgtt ctccgaggag cagctcacaa ccttgctggc gctggcgcgc aagggcgtcg
     2881 caaaactcat cgacctgcag aagatggcgg tgatgtgaac gcacgacgga tgacaggtga
     2941 cggaagacgg atggccggaa ataacacgtt gaagggctcc tcgcccggcg gcatccgtca
     3001 ttcgtcgtcc gtcattcatc gtccgctcgc gggccgcctc gtcatcgcga cgcacaacaa
     3061 cggcaagctc acggagatgc gcgacctcct tgcgccgtac ggcatcgacg ccacatcggc
     3121 gggcgaactg gaccttgcgg aaccggaaga gaccggcatg gccttccgcg ccaacgcgcg
     3181 catcaaggcc gaagccgccg ccaaggcctc gggactgccg gcctttgccg atgattccgg
     3241 acttgcggtc gacgcgctcg gcggcgagcc cggcatccat tccgcacgct gggccgggcc
     3301 cgaccggaac ttccgccgcg ccatggagct ggtcgaagaa agattgcgcg agcgcggcgc
     3361 gacgacgccg cggcagcgca aggcgcactt cgtgtccgcg ctgagcattg cctggccgga
     3421 cggccacata gaggagttcg agggccgcgt cgacggcacg ctcgtctggc cgccgcgggg
     3481 cgacaagggt tttgggtacg atccgatttt cctgcccgac gggcatgcgc gcacgttcgg
     3541 agaaatgtcg agcgaggaga agcacggcct gccgccgcgc ggactcgggc tgtcgcaccg
     3601 cgcccgcgcc tttcgcaagc tcgcagaggc ctgccttcgt tctcgtcccc cgtcggccgc
     3661 ggaagccgga tcgcggcgcg atccgggagc aggccgaccg tgagcggcgc gccaaccacg
     3721 ccgccggcgg cggcgagcga aacggcgttc ggcgtctaca tccattggcc gttctgcctg
     3781 tccaaatgtc cctattgcga tttcaacagt cacgtccgcc actccggcat tgacgaggcg
     3841 cgcttcgtgc gcgcgttcac gacggagatc gcggcgattg ctgcgcgcgt gccgggccgg
     3901 accgtctcca cgatcttcat cggcggcggc acgccctcgc tgatgcagcc ggcgacggtt
     3961 gccgcggtgc tcgatgccgt cgcgcggcat tggcgcatcg cgc
//
LOCUS       DATMQB010000354         4937 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1699455, whole genome shotgun sequence.
ACCESSION   DATMQB010000354 DATMQB010000000
VERSION     DATMQB010000354.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4937)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4937)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4937
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1699455"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(4..636)
                     /locus_tag="VNY79_10050"
     CDS             complement(4..636)
                     /locus_tag="VNY79_10050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase-like cysteine peptidase"
                     /protein_id="HWX72833.1"
                     /translation="MGSGAKRFWRLSAAASFIAIAAFTVPAASNADERPLFVALGDTA
                     RAPVGWIEFCEENPRDCAGRPTMPRDVVLSTPAWKELARINLWVNSHIKPMTDLEHYG
                     VVEKWSYPEDGYGDCEDYVLLKRRMLIQSGWPREALLVTVVRDRHGDGHAVLTVKTDK
                     GELILDNQNDEIRLWSDTGYRFVKRQSQADPNVWISLGDPRAAPATATSR"
     gene            complement(933..1445)
                     /locus_tag="VNY79_10055"
     CDS             complement(933..1445)
                     /locus_tag="VNY79_10055"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HWX72834.1"
                     /translation="MPRAELPAIIPLRQFGENTWLAPGFIEPVGDARSSFALNGETVT
                     VRDGRRARADGRLAGACLAMASAVRNCVRLLSVPLTTALRFASTHPAEFLGLGNRLGK
                     LATGYRAAMVALDGAAIAVLDTWVAGAGGERFPEIDPLLSPIRPREGGNQQIYCFVAL
                     SVWVLALARE"
     gene            complement(1548..2579)
                     /locus_tag="VNY79_10060"
     CDS             complement(1548..2579)
                     /locus_tag="VNY79_10060"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018406894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HWX72835.1"
                     /translation="MTPLGPGMAAELRESPEAVERQAEALGAVVADLAKRLKRRPPQV
                     VVTCARGSSAHAATFVKHLIERHLGIPVAAAAPNIATIYHRPLELRDQLFLAISQSGR
                     SDDLIETARMARAAGALTVAIVNAPSSPLAAACETVLPIAAGPELSVAATKTFVASLA
                     ALLRLTAMWTDDAAIRHACDRLPERLAEATRLDWSEGLGVLAKSSSLVTIGRGPTLAI
                     AREAALKLKEICTLHAEAFSSAEFRHGPIALVSRTYPILVLAPTDEAAPGISDLIADL
                     RRDGACVLVAAAGERTTGVLPALAPEQPDADAICLIQSFYAFLVRLAQRRGADVEHPR
                     HLQKVTRTR"
     gene            complement(2611..3501)
                     /locus_tag="VNY79_10065"
     CDS             complement(2611..3501)
                     /locus_tag="VNY79_10065"
                     /inference="COORDINATES: protein motif:HMM:NF013986.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BadF/BadG/BcrA/BcrD ATPase family protein"
                     /protein_id="HWX72836.1"
                     /translation="MDSNALLLGVDGGGTSCRARLCTFAGEILGEGITGPANLRLGLG
                     RSFAAVNEVAVQCLGQAGLAPGQLARTVACLALAGASEPTQLAAARAHKHPFGKALFT
                     TDAHAACIGAHGERDGAVIVVGTGSIGWAVLNGKSHRFGGWGLPLSDEGSGAWLGCEA
                     LRRVLWAFDGRIGWTPLLRALFADFADNPHAIVRWTQTATPRDFGSFAPRVFDHAGRG
                     DPVGNELAALAAGHIDALAARIIAAGTTRLALVGGCAPLLKPRLGEAAKSRLVEPLGD
                     ALHGAVHLARAAAPSLAQVA"
     gene            3627..4619
                     /locus_tag="VNY79_10070"
     CDS             3627..4619
                     /locus_tag="VNY79_10070"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018406893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016835 - carbon-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0097367 - carbohydrate derivative binding
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0046348 - amino sugar catabolic process
                     [Evidence IEA];
                     GO_process: GO:0097173 - N-acetylmuramic acid catabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HWX72837.1"
                     /translation="MDTEHASPRYSDIDLWEPADILDAMIEGQMAAVAAVRAERDAVE
                     QAARAMEARLRGSGRLIYAGAGTSGRLAVQDGAELIPTFNWPADKLLLLMAGGKDALL
                     RSAEGAEDQTDQALNLMRQHRVAAADVVIAVAASGTTPFTLACLREARQRGALTIGIA
                     NNRGTPILEEADCPIRLDTGAEPIAGSTRMKAGTAQRVTLNILSSLVMIRLGRVHEGL
                     MVDVQAINAKLVRRSETILRRLSGRSSEEAADALRRANGSVKLAMLLLHGCNAEEGTR
                     LLDQAGGRLRTALTNIGGREAAAAAAELVEDDVPTIAEELPSAVRDRQAIKPGG"
BASE COUNT          855 a         1614 c         1687 g          781 t
ORIGIN      
        1 tgttcagcgc gaggttgccg tggccggcgc cgcgcgcgga tcgccgagcg agatccaaac
       61 attcggatcg gcctgcgatt ggcgtttcac gaaacggtag ccggtgtcag accagagccg
      121 gatctcgtcg ttctggttgt cgaggatcaa ttcgcccttg tcggtcttca cggtgagcac
      181 ggcatggccg tcgccgtgcc ggtcgcgcac cacggtgacg agcagcgcct cgcgcggcca
      241 gcccgactgg atcagcatac ggcgcttgag cagcacgtag tcctcgcaat cgccgtagcc
      301 gtcctcgggg taggaccatt tctcgaccac gccgtagtgt tcgaggtcgg tcatcggctt
      361 gatgtggctg ttgacccaca gattgatgcg agcgagctcc ttccaggccg gcgtcgagag
      421 cacgacgtcg cgtggcatgg tcgggcggcc ggcgcagtca cgcgggttct cttcgcaaaa
      481 ctcgatccag ccgaccggtg cccgggcggt gtcgccgagc gcgacaaaca gcggacgctc
      541 gtccgcgttg ctcgccgccg gcaccgtgaa tgcggcaatc gcgatgaagc tcgcagccgc
      601 actcagccgc caaaatcgtt tagcacccga acccatatga cccctctccc gtcttcttgg
      661 ggtcacgttt ctcacaaaga tttttcggcg ccgctaagtt cgatgcttca atttgaacta
      721 aacacagcta aagaacaccc ggaaatcgca tcgacatttg agcaaatatc gtggcaaatt
      781 ttatttgtta aaatttggag caaattgcgc gtatgcggcc aagtcgatgc ggaagcaacg
      841 ttattgcctg ccgaaaggtc cgctcggcgg atcgctgccg gtgtcgaccg ctccacttat
      901 gtacattttg atcgaattga ctcactcttg gttcactcac gcgcaagcgc gagaacccag
      961 acggagagcg cgacaaagca ataaatctgc tggttcccgc cttcgcgggg acgaatgggc
     1021 gagagtagcg ggtcgatctc ggggaagcgc tcgccgccgg cgccggcgac ccaggtgtcg
     1081 agaaccgcga tcgcggcgcc gtcgagcgcg accatggcgg cgcgatatcc cgtcgcgagc
     1141 ttaccaagcc tgttgccgag gccgagaaat tccgccggat gagtggaagc aaaccgcagc
     1201 gccgtcgtca gcggcacgct gagcaggcgc acgcaattgc gcaccgcact cgccatggcg
     1261 agacaggcgc cggcaagcct tccgtccgcc cgcgcgcggc gaccgtcgcg caccgtcacg
     1321 gtttcgccgt tgagcgcgaa tgacgagcgc gcgtcgccga ccggctcgat gaagccgggc
     1381 gcgagccagg tgttctcgcc gaattggcgc agcggaatga tcgccggcag ttcggcacgc
     1441 ggcatgacca gcggcgatgc gggcgccgtc gctgacgacc gccgcgtccc cgtggaccgc
     1501 cacgccgtcg aaaacgcacg gggcggcgac ggcgtgaacg ctgcccctca tcgggtgcgt
     1561 gtcactttct gcaaatggcg gggatgctcg acatcggcgc cgcggcgctg cgccaagcga
     1621 accaggaaag cgtagaagct ctgaatgagg cagatggcgt cggcgtccgg ctgctcgggc
     1681 gcgagcgccg gcagcacgcc cgttgtgcgc tcgccggccg cggcgacgag gacgcatgca
     1741 ccgtcgcggc gcaggtcggc gatgaggtcg gaaataccgg gtgccgcttc gtcggtcggc
     1801 gcgagcacga ggatgggata ggtgcgcgac accagggcga tcgggccgtg gcggaattcc
     1861 gcgctgctga acgcctcggc gtgcagcgtg cagatctcct tgagtttgag cgccgcctcg
     1921 cgggcgatgg cgagcgtcgg accgcggccg atggtgacga gactgctcga cttcgccaac
     1981 acgcccagac cctcgctcca atcgagccgc gttgcttcgg cgaggcgctc cggcagccgg
     2041 tcgcaggcgt ggcgtatggc cgcatcgtcc gtccacattg ccgtcaggcg cagcaacgcg
     2101 gcgagagagg ccacgaaggt tttcgtcgct gctacgctga gctccggtcc cgccgcgatc
     2161 ggcagaacgg tctcgcaggc cgccgccagc gggctcgacg gggcgttgac gatcgcgacc
     2221 gtgagtgcgc cggccgctcg cgccatgcgg gccgtttcga tcagatcgtc gctgcggccc
     2281 gactgcgaga tggcgaggaa gagctggtcg cggagctcga gcgggcgatg atagatcgtt
     2341 gcgatgttag gtgcagccgc ggccaccgga atgccgaggt gacgctcgat cagatgcttg
     2401 acgaacgtgg ccgcgtgcgc cgagctgcct ctggcgcagg tcacgaccac ctgcggcggc
     2461 cggcgcttga gtcgcttggc gaggtcggcg accaccgccc cgagggcctc cgcctgacgc
     2521 tcaacggctt cgggagactc gcgcagctct gccgccatgc cggggccgag cggcgtcatc
     2581 ggcgagcctt tctcccctcg caaccgccca tcaggctacc tgcgccagcg atggcgccgc
     2641 ggcgcgtgcg agatgcacgg caccatgcag ggcgtcgccg agtggctcca cgagacgcga
     2701 tttcgctgct tcgccgagtc gcggcttgag taacggcgcg cagccgccga cgagcgccag
     2761 ccgcgtagtg ccggcggcga tgatccgggc agcgagcgcg tcgatgtgac cggcggccag
     2821 ggccgccaat tcgttaccga ccggatcgcc gcggccggcg tggtcgaaga cccgcggcgc
     2881 aaacgatcca aaatcgcgcg gcgtggcggt ctgcgtccag cgcacgatgg cgtgcggatt
     2941 gtcggcgaaa tcggcaaaca gcgcgcgcaa caatggcgtc cagccgatgc gcccgtcaaa
     3001 cgcccagagg acgcggcgca acgcctcgca gccaagccag gcgccgctcc cttcgtcgga
     3061 gagcggcagg ccccagccac cgaagcggtg ggattttccg ttcaacaccg cccagccgat
     3121 cgagccggtg cccacgacga taaccgcgcc gtcgcgctcg ccatgggcgc cgatgcaggc
     3181 ggcgtgcgcg tcggtggtaa agagcgcctt gccgaacggg tgcttatggg cccgcgccgc
     3241 ggcaagctgc gtcggttcgc tggcgccggc gagggcgagg caggcgacgg tccgcgccaa
     3301 ttgtccgggc gcaagtccgg cctggccgag gcattgaacg gcgacttcat tgacggcagc
     3361 aaagctgcgt ccaaggccga gccgcagatt cgccggcccg gttatccctt cgccgaggat
     3421 ttcgcccgcg aacgtgcaca ggcgcgcccg gcagcttgtg ccaccgccgt ccacgccgag
     3481 gaggagcgca ttcgagtcca cgcgcaggtt ccgtctttgt ccagtattgg tcccggcaca
     3541 tataagaact aattagggtc gaaatagttt tcctttgagg cagtgccgcc gtttttgctg
     3601 cttcgaatcg ccgcgagggc caggccatgg acaccgagca cgccagtccg cgctattcgg
     3661 atatcgacct ttgggagccc gccgacatcc tcgatgccat gatcgagggg cagatggccg
     3721 cggtggcggc ggttcgcgcc gaacgcgacg cggtcgagca agccgcccgg gcgatggaag
     3781 cgcgcctgcg cggcagcggg cgccttatct atgccggagc gggaacctcg ggccggcttg
     3841 ccgtccagga cggcgccgag cttatcccga cctttaactg gcccgcggat aagctgttgt
     3901 tgctcatggc cgggggcaag gacgccctgt tgcgatcggc cgagggcgcc gaagaccaga
     3961 ccgatcaggc gctgaatctc atgcgccagc accgcgtcgc cgccgccgac gtggtgatcg
     4021 ccgtcgcggc cagcggcacg acaccgttca cgctcgcctg cctgcgtgaa gcccggcagc
     4081 gtggcgcgct gacgatcggt atcgccaaca atcgcggcac gccgattctt gaggaagcgg
     4141 actgtccgat tcggctcgac acgggcgccg aaccgattgc cggatcgacg cgcatgaagg
     4201 ccgggaccgc gcagcgggta acgctcaata tcttgtcgtc gctggtcatg atccgcctcg
     4261 gccgcgtgca tgaagggctc atggtcgacg tgcaggcgat caacgccaag ctcgtgcggc
     4321 ggagcgagac gattctgcgc cggttgtccg gccgcagcag cgaggaagcc gccgacgcgc
     4381 tgcgccgggc caacggaagc gttaagcttg ccatgctgct gctccacggc tgcaacgccg
     4441 aggaaggcac gaggctgctc gaccaagcgg gagggcggct gcggacggcg ctcacaaaca
     4501 ttggcgggcg tgaggcggcc gcggctgcgg ctgaactcgt cgaggacgac gtcccgacaa
     4561 tagccgaaga actgccctcg gccgtccgcg accgccaagc gatcaagccc ggcggatgag
     4621 cactcctcaa aacaccattg atcgttcaga atttttcgcc gcttgttgag gtttacccac
     4681 aacgccaccc atgaccgcgc aaccgtcaga ccgggctggt cttggcccag cgaccgcgag
     4741 cggcgatgct ggtccgtgac aagcgcacga ggcgaacggc gcgtgcggcc ggcacgagcg
     4801 gcacgacaga gcgggaatga ggcttgttaa tcgccgcgtc gcggtggctt ttccagcgac
     4861 tgtagcggct cgtaggcaag cgttggcggg ccagcgtgtt gaaaatccca cataagccag
     4921 cagtgattga atgacgg
//
LOCUS       DATMQB010000355         5605 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1700143, whole genome shotgun sequence.
ACCESSION   DATMQB010000355 DATMQB010000000
VERSION     DATMQB010000355.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5605)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5605)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5605
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1700143"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..518)
                     /locus_tag="VNY79_10075"
     CDS             complement(<1..518)
                     /locus_tag="VNY79_10075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HWX72838.1"
                     /translation="MSAQIEKIALFIDGANLYATAKSLGFDIDYKRLLREFQSRGYLV
                     RAFYYTAVIEDQEYSSIRPLIDWLDYNGYTVVTKATKEFVDQTGRRKVKGNMDIELAV
                     DAMEIAPFVDQMVLFSGDGDFRSLVEAVQRRGVRVIVVSTISTQPPMVADELRRQADQ
                     FVDIMELQAKIGR"
     gene            903..1316
                     /gene="rpoZ"
                     /locus_tag="VNY79_10080"
     CDS             903..1316
                     /gene="rpoZ"
                     /locus_tag="VNY79_10080"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000345 - cytosolic DNA-directed RNA
                     polymerase complex [Evidence IEA];
                     GO_function: GO:0003899 - DNA-directed 5'-3' RNA
                     polymerase activity [Evidence IEA];
                     GO_process: GO:0006351 - DNA-templated transcription
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HWX72839.1"
                     /translation="MARVTVEDCIDKVENRFDLVLLASHRARMISSGTQITVERDNDK
                     NPVVALREIAEKAISPEDLKEELVHSLQKYVEVDEPEPDGVPLIGAPGTGVDADDTEV
                     TTDRMSEEELLKGLEGLTPPESQPEPDADAGDEED"
     gene            complement(1438..2040)
                     /locus_tag="VNY79_10085"
     CDS             complement(1438..2040)
                     /locus_tag="VNY79_10085"
                     /EC_number="1.15.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004784 - superoxide dismutase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HWX72840.1"
                     /translation="MPFSLPELPYSYDALAPYMSRETLEFHHDKHHLAYVNNGNNLMK
                     GTEFEGRPLEEVVKSSFYANPGLFNNAGQHYNHVHFWKWMKPGGGGDRMPGNLEKQIV
                     ADLGSVAKMKEAFIQAGVTQFGSGWCWLAVRYGRIEVMKTANGENPLVHGARPILGCD
                     VWEHSYYIDYRNRRPDYLKGFVDHLVNWEYVAEMFSAASK"
     gene            2337..3215
                     /locus_tag="VNY79_10090"
     CDS             2337..3215
                     /locus_tag="VNY79_10090"
                     /inference="COORDINATES: protein motif:HMM:NF013134.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein subunit M"
                     /protein_id="HWX72841.1"
                     /translation="MKPPVFEYERPDSLRAALDSLTRHGSKAKLLAGGYSLIPMLNLR
                     LIKPGRLIDVSRLAELQYLVEEFGQLRIGALTTHNTILRSSAIAANCPIMVEAYRHVA
                     NHSIRNRGTLGGNLCHNDPTFEMPLVVTLLGGTMLARSARGSRTIAAQRFFKAPFATD
                     LAADEMLVEVRVPRMPSGHGYCFLEVSQRLGDRALIAAACLLTIRYGACREVRIGFRN
                     AGDSVYRVAAAEAAIEGKPASASVIEAAAEAAAGAITPPGDLHADEAYRRDVAATLTR
                     RMLRTACARAGHAVDG"
     gene            3243..3731
                     /locus_tag="VNY79_10095"
     CDS             3243..3731
                     /locus_tag="VNY79_10095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019996654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HWX72842.1"
                     /translation="MDTLQINVTVNGRAFQRRVEPRLLLSDFIRHEIGLTGTHVGCEN
                     GVCGACTVLLDGLATRACCMLAVQADGRRIETVESLGRANNLNLLQRAFWEMHGLQCG
                     YCTPGMLMLMTELLRENPHPDRETIRLRLNDNICRCTGYEDIVNSVVRAVELMRGETA
                     VR"
     gene            3731..>5605
                     /locus_tag="VNY79_10100"
     CDS             3731..>5605
                     /locus_tag="VNY79_10100"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HWX72843.1"
                     /translation="MAEVGKIHSPPPGRQKERPDQRFSIIGTRMLRKEDPRFLAGRGR
                     FIDDITLPNIAHAAALRSPHAHARIRSIDKSAAEALPGVVAVITGEEAARETGPLPCF
                     ANPPVEQRCIALGKVRHVGEPVALVIADSRYIAEDAIALINVVYEPLPAVSDMMEAIN
                     SRGDAVLHPERGPNNVAEHRNYLFGPVEQEFAGAAHVIKRRLRWSRSGGQPIETAGAV
                     AAFDEGSGKFTIYVNGSMYNYIGFTIAAALKVPSHLVNIVPVDAGGSFGSKLFLHKVS
                     VLAALGSRVAGRPVKYIEDRIDYITASDNHGSDRIYDVELALDASHRMTALRYKVVDD
                     YGAYFQYGLGTHGNGFSQTVGPYKIRAVGAEIYAVFTNKCQQGACRGFGSEVTNFMIE
                     RVVDAAVEELGLDPMGFRRDNFIGPDEFPYQIPTGNLYDSGNYPGALDMALEMLDYKS
                     WREKQQAARTQGRYVGIGVASCQEKGVFSATEFWMLNREPGFALTSSPESASVKIDPT
                     GKAVISLHAPCWGNSPETVATMVLAEQLAMDPADISVAYSDTDHGLPGTGPGGSRYTV
                     MVTGAITGAASIIKEKLKRVAGHMLEAGPHDLEFRSGKVGVKGAPGLEVAIAEVAMQA
                     H"
BASE COUNT         1017 a         1861 c         1800 g          927 t
ORIGIN      
        1 cggccgatct tggcttgcag ctccatgatg tcgacgaact ggtcggcctg gcggcggagc
       61 tcgtcggcca ccatcggcgg ctgggtcgag atggtggaga cgacgatgac gcgcacgccg
      121 cgccgctgca ccgcttcgac cagcgagcga aagtcgccgt cgccggagaa cagcaccatc
      181 tggtcgacga agggcgcgat ttccatggcg tcgacggcga gctcgatgtc catgttgccc
      241 ttgaccttgc gccgcccggt ctggtcgacg aactccttgg tcgccttggt gacgacggta
      301 tagccgttgt agtcgagcca atcgatcagc ggccggatcg acgagtattc ctggtcctcg
      361 atcacagcgg tgtaatagaa cgcacgcacg aggtagccgc gcgactggaa ttcgcgcagc
      421 aggcgcttgt agtcgatgtc gaagccgagc gatttggcgg tggcgtaaag gttggcgccg
      481 tcaatgaaga gcgcaatctt ctcgatctgt gccgacatgg tagctctcgc gatctgtctc
      541 tcgtcatgaa acccggagca gccgcaatcg gatcgacggt tccggcgttt aactaaaaca
      601 ggtttgtcgc cgcggcgaac gcccagcggc cgaagtactc tcgccaaagc gggctctaca
      661 agcgccgggc ggcgaaatcg ctgcggcacg ccgtcgcggc gtttcccaaa ttattgattc
      721 ggaaagccgc ggcttggttc ccggcgtgtg ggtaacagag ccgcgtgcgg acgccaagtt
      781 aaatatcaaa acttggaaaa cggcgccggc aacgcccttg cgcttgcgcc ccttcgagga
      841 tacttaacgc gcggccgggg gttgcccttg gaattgcaag gaacctcgcc aggagctcgc
      901 caatggcccg cgttaccgtc gaagattgca tcgacaaggt tgaaaaccgc ttcgatctgg
      961 ttctgctcgc gagccaccgc gcgcgcatga tttcgtccgg gacccagatc accgtcgaac
     1021 gcgacaacga caagaacccg gtcgtggcgt tgcgcgagat cgcggagaag gcgatctcgc
     1081 ccgaagacct caaggaagag ctcgttcatt cgctgcagaa atacgtcgag gtcgacgagc
     1141 cggagcccga cggggttccc ttgatcggcg caccgggcac cggggtcgat gccgacgaca
     1201 cggaagtcac caccgaccgc atgagcgagg aagagctgct caagggcctg gaaggcctca
     1261 cgccaccaga gagccagccc gagccggacg ccgatgccgg cgacgaggaa gattagggcg
     1321 ctggtactcg tagcccggat gagcgcggga aatccgggag acttcttaca aagctgacct
     1381 ccggtattcg ccgcgctgaa acgggcgatc gcgactcacc tcggtgtcga cgcctgctca
     1441 tttgctcgcg gccgaaaaca tttccgcgac atactcccaa ttgacgagat gatcgacgaa
     1501 ccccttgaga tagtcggggc gccggttgcg gtagtcgata tagtaggagt gctcccagac
     1561 gtcgcagccg aggatcggcc gcgcaccatg aacgagcggg ttctcgccgt ttgcggtctt
     1621 catcacctcg atccgcccgt agcggactgc gagccagcac cagcctgagc cgaactgggt
     1681 gacgcccgcc tggatgaacg cctccttcat tttcgccacc gatccgagat cggcgacgat
     1741 ctgtttctcc agattacccg gcatcctgtc gccgccgcct ccgggcttca tccatttcca
     1801 gaaatggacg tggttgtagt gctgcccggc gttgttgaag agaccgggat tggcgtagaa
     1861 cgagcttttg accacctcct cgagcggcct accttcgaac tccgtgccct tcatcaggtt
     1921 gttgccgttg ttcacgtagg cgaggtgatg cttgtcgtga tggaattcga gcgtctcgcg
     1981 cgacatgtaa ggggcgagcg catcgtagga atagggaagt tcgggcaacg agaacggcat
     2041 cgatcgtctc ctgcgtcacg ggcaaaaccg gtgaaggcga actgcttgtc gcctcatcgc
     2101 gactcgacca caaggcacgc gggcgctcaa cagcgatgcg ccggcggtgc cctatactct
     2161 tcgcctcgct cgacagtcgc gcgcgccata ggttggcgcc gcgctccatc gaggtcctcc
     2221 ccgtcggctc ttgtcagggc gggggccatc gatcacagtc cgggcggaaa tcaacgagaa
     2281 cactgcggat tttgagcgag cgcgctttga aattcgaggc ggggagggga aggcggatga
     2341 agcctcccgt attcgagtat gagaggccgg acagcctgcg cgctgcgctc gattccctga
     2401 cgcggcacgg cagcaaggcc aagcttctgg cgggaggcta cagcctcatc ccgatgctca
     2461 acctgcggct catcaaaccg ggccgcctca tcgacgtgag ccggctcgcg gagctgcagt
     2521 acctcgtcga agagttcggc cagctgcgca tcggcgcgct gacgacgcac aacacgatcc
     2581 tgcggtcgag cgccatcgct gcgaactgcc cgatcatggt cgaagcctac cggcacgtcg
     2641 ccaatcattc gatccgcaac cgcggcacgc tcggcggcaa tctgtgccac aacgatccca
     2701 ccttcgagat gccgctcgtc gtcaccctgc tcggcggcac gatgctggcg cgcagtgcgc
     2761 gcggctcgcg taccattgcc gcacaaaggt ttttcaaggc gccgttcgcg accgatctcg
     2821 ccgccgacga gatgctcgtg gaggtgcggg tgccgcggat gccgagcggc catggctact
     2881 gcttcctcga ggtgagccag cgcctgggcg accgggcgct gatcgccgcc gcctgcctcc
     2941 tgaccattcg ctacggggcc tgccgggagg tccgcatcgg ctttcgcaac gccggcgaca
     3001 gcgtctaccg ggtcgccgcc gcggaagccg cgatcgaggg caagccggct tcggcctccg
     3061 tgatcgaggc ggcggccgag gcggccgccg gcgccatcac gccgcccggc gacctgcacg
     3121 ccgacgaggc ctaccggcgc gacgtcgccg cgaccctgac ccgccgcatg ctgcgcacgg
     3181 cctgcgcgcg cgccggccat gccgtcgacg gctgaattgc gcaagagggc gaccaacagg
     3241 caatggacac gctgcagatc aacgtgaccg tcaacggccg ggcgttccag cggcgggtcg
     3301 agccgcggct gcttctctcc gacttcatcc gccacgagat cggcctgacc ggcacgcatg
     3361 tcggctgtga aaacggcgtg tgcggcgcct gcacggtcct gcttgatggg ctcgcgaccc
     3421 gcgcctgctg catgctggcg gtgcaggccg acggccgccg catcgagacc gtcgagtcgc
     3481 tcggccgcgc caacaatctc aacctgctgc agcgcgcgtt ctgggaaatg cacggcctgc
     3541 aatgtggtta ctgcacgccg ggaatgctga tgctgatgac cgagctgttg cgcgaaaatc
     3601 cccatcccga ccgggaaacg atcaggcttc gcctcaacga caatatctgc cgctgcaccg
     3661 gctatgagga catcgtcaac tcggtcgtgc gcgcggtcga gctgatgcgc ggcgaaacgg
     3721 cggtgcgctg atggcggagg tcggcaaaat ccattcgccc ccgcccggcc ggcagaagga
     3781 gcggccggat cagcggttca gcatcatcgg cacgcgcatg ctgcgcaagg aagacccccg
     3841 tttcctcgcc ggacgcgggc gcttcatcga cgacatcacg ctgccgaaca tcgcccacgc
     3901 cgcggcgctg cgcagcccgc acgcccacgc gcgcatccgc tcgatcgaca agagcgcggc
     3961 cgaggcgctc cctggcgtcg tcgcggtgat caccggcgag gaggcggcgc gcgagaccgg
     4021 accgctgccc tgctttgcca acccgccggt cgaacagcgc tgcatcgcgc tcggcaaggt
     4081 gcgccacgtc ggcgagccgg tggcgttggt catcgccgat tccaggtaca tcgccgagga
     4141 cgccatcgcc ctcatcaacg tcgtctacga gccgctgccg gccgtctccg acatgatgga
     4201 ggcgatcaat tcccgcggcg acgcggtgct tcatcccgag cgcggcccga acaatgtcgc
     4261 cgagcaccgc aactatctct tcggcccggt cgagcaggaa ttcgccggcg ccgcccacgt
     4321 gatcaagcgc cgcctgcgct ggtcgcgttc cggcgggcag ccgatcgaga ccgcaggcgc
     4381 ggtcgcggct ttcgacgagg gctcgggcaa gttcacgatc tacgtcaacg gctcgatgta
     4441 caactacatc ggcttcacca tcgccgccgc gctcaaggtt ccgagccatc tggtcaacat
     4501 cgtcccggtc gacgccggcg gcagcttcgg cagcaagctt tttctgcaca aggtgtcggt
     4561 gctcgccgcg ctcggctcgc gcgttgccgg ccgcccggtc aaatacatcg aggaccgcat
     4621 cgactacatc accgcgagtg acaatcacgg atcggaccgc atctacgacg tcgagcttgc
     4681 gcttgacgcc agccaccgga tgaccgcgct gcgctacaag gtggtggacg actacggcgc
     4741 ctacttccag tacggcctgg ggacgcacgg caacggtttc tcgcagaccg tcggccccta
     4801 caagatccgc gccgtgggcg ccgagatcta tgccgtcttc accaacaagt gccagcaggg
     4861 cgcctgccgc ggcttcggct ccgaggtgac gaacttcatg atcgagcggg tggtggacgc
     4921 cgcggtcgag gagctcggcc tcgatccgat ggggttccgg cgcgacaatt tcatcgggcc
     4981 cgacgagttt ccctatcaga tcccgaccgg caacctctac gacagtggca actatcccgg
     5041 cgcgctcgac atggcgctgg agatgctcga ctacaaaagc tggcgcgaga agcagcaggc
     5101 ggcgcgcacc caagggcgat atgtcggcat cggcgtcgcc agctgccagg aaaagggcgt
     5161 gttcagcgcg accgaattct ggatgctcaa ccgtgagccg ggtttcgcgc tgaccagctc
     5221 gccggaaagc gcctcggtca agatcgaccc gaccggcaag gccgtgatct cgctgcatgc
     5281 tccgtgctgg ggcaacagtc ccgagaccgt ggcgaccatg gtgctcgccg agcagctcgc
     5341 gatggatccg gccgacatca gcgtcgccta ttccgacacc gatcacggcc tcccgggaac
     5401 gggaccgggc ggcagccgct acaccgtcat ggtcaccggg gcgatcaccg gcgccgcctc
     5461 gatcatcaag gaaaaactca agcgcgtggc cggccacatg ctcgaagccg gcccccacga
     5521 tctcgaattc cgcagcggca aggtcggcgt caagggcgca cccgggctcg aagtggcgat
     5581 cgccgaggtg gcgatgcagg cgcac
//
LOCUS       DATMQB010000356        20919 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3569760, whole genome shotgun sequence.
ACCESSION   DATMQB010000356 DATMQB010000000
VERSION     DATMQB010000356.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 20919)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20919)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20919
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3569760"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..270)
                     /locus_tag="VNY79_10105"
     CDS             complement(<1..270)
                     /locus_tag="VNY79_10105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HWX72844.1"
                     /translation="MSASAHDRHGDRYRPETRLVHSGILRSQFGETSEALFLTQGYVY
                     DNSLQAERRFKNEDPGFQYSRFANPTVAMFEARMAAFEGAEAARAT"
     regulatory      complement(343..421)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00521"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="SAM riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00521"
     gene            532..1692
                     /locus_tag="VNY79_10110"
     CDS             532..1692
                     /locus_tag="VNY79_10110"
                     /EC_number="3.5.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2'-deoxycytidine 5'-triphosphate deaminase"
                     /protein_id="HWX72845.1"
                     /translation="MEVQEELLPLETPEDNLSLNSGILPAQWIKRLFERGQITSRQLD
                     RNQIQPASLDLRLGKVAYKIHASFLPGLSSSVQQRVERLTSYEIDLSTPQVLTKGSVY
                     LIEIEETLNLGSSISGIANPKSSTGRLDVFTRIIANKSDVFDVVPANYTGKLWAEVSP
                     RTFDVMVRRGTRLSQLRFRRRTSSQHPHATFRLNDTELEALHDRSRLTDETPIIRQGL
                     NLRVNLTRDNGKNIVAYRAKKYTSFIDMDKVAVYRAEDFWDAIEPTSEGNLLLSPGEF
                     YILASKEKLHIPADHAAEMVAIDPVMGEFRVHYAGFFDPGFGQTAQQGPGSKAVLEVR
                     TYDIPFYLEDGQTIGRLAFEKLSERPSAEYGDAIASNYQGQRLKLSKHFLNS"
     gene            complement(1713..2186)
                     /locus_tag="VNY79_10115"
     CDS             complement(1713..2186)
                     /locus_tag="VNY79_10115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72846.1"
                     /translation="MMPAILGVVAAIAAALIARSVTISNHRQAWINGLRDDLAAFFTA
                     IDVIHFRMAMIAHGGDVSSLEEQQKARNDVLLAHRKILMRLNMSETLHNELAKSLEPL
                     LMVRGEAVDQEQLATSVALARTILKREWEVTKYGAFTTPIVQFKDWWRRRQTPRK"
     gene            2280..2576
                     /locus_tag="VNY79_10120"
                     /pseudo
     CDS             2280..2576
                     /locus_tag="VNY79_10120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041084.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008829 - dCTP deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0009394 - 2'-deoxyribonucleotide metabolic
                     process [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2'-deoxycytidine 5'-triphosphate deaminase"
     gene            2694..3245
                     /locus_tag="VNY79_10125"
     CDS             2694..3245
                     /locus_tag="VNY79_10125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAN domain-containing protein"
                     /protein_id="HWX72847.1"
                     /translation="MRALVLCFAVVITAAALIAASIVPAAAQSGYDRPGGDYASAAVT
                     GGDPAICAARCEHDRRCRAWSFSYPTSSDGPAMCWLKHEIAPAVKASCCVSGVRGAGV
                     IEPRLGELEYSIDRIGGDYKNFETTPDAHGKACAEACQGDTRCRAWTYRRQGYGTATA
                     RCYLKDMVKPPRSRPCCISGVVR"
     gene            complement(3313..4734)
                     /gene="tldD"
                     /locus_tag="VNY79_10130"
     CDS             complement(3313..4734)
                     /gene="tldD"
                     /locus_tag="VNY79_10130"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008237 - metallopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metalloprotease TldD"
                     /protein_id="HWX72848.1"
                     /translation="MTSAPTSLVDRAGLERPRLAKIISRGLEGADDGELFLEYRQAEM
                     LVFDNGRLKQATYDTSQGFGLRAVKDEAVGYAHASDVSEAAIARAADAVRAVKGGYSG
                     HYAGPPARTNVKLYSEESPLGSPAFEAKARLLETIDAYARAKDPRVRQVSVSLGATWQ
                     AVEIVRSDGETYRDVRPLVRVNVSVVVGDGDRQEAGSAGYGGREGYERFVVAHTWQNA
                     VDTAVRQALTNLEAVPAPAGEMDVVLGSGWPGVMLHEAIGHGLEGDFNRKKTSAFAGL
                     MGQRVAAKGITVVDDGTIAARRGSLSIDDEGTPTNRTVLIDDGVLVGYMQDRQNARLM
                     GMKPTGNGRRESFAHVPMPRMTNTYMLAGTHEPDEIIASVKNGIYAVHFGGGQVDITS
                     GKYVFECTEAYRIENGKRGAPIKGAVLIGNGPTDLNRISMVGNDLALDDGIGTCGKNG
                     QGVPVGVGQPTLRIDRITVGGTG"
     gene            complement(4822..5358)
                     /locus_tag="VNY79_10135"
     CDS             complement(4822..5358)
                     /locus_tag="VNY79_10135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated locus B family protein"
                     /protein_id="HWX72849.1"
                     /translation="MGIFDVARRMRPIAPALAGAAISLAATSLFATHAAAQGAVRSVH
                     GDWQIRCDTPPGAQGEQCALMQSVTAEDRPNVGLTVIVLKTTDQKSRLMRVVAPLGVL
                     LPSGLGLKIDSNDVGRAGFVRCLPNGCVAEVVMDDNLINQLRNGQTSTFIIFQTPEEG
                     IGFPMSLKGFGEGFDKLP"
     gene            5815..6660
                     /gene="coxB"
                     /locus_tag="VNY79_10140"
     CDS             5815..6660
                     /gene="coxB"
                     /locus_tag="VNY79_10140"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012030177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit II"
                     /protein_id="HWX72850.1"
                     /translation="MFARLSAWALTVGALVASAGGAWAALGHPTPWQLGLQDAATPVM
                     ADIAWFHDYLLWIIAAITAFVLILLGIIVVRFNASANPTPTRTTHNTLLEVLWTIVPV
                     VILLFIAVPSFRLLFVQLEVPKPDLTIKATGKQWYWSYTYPDNGNFEFDSLIVAEKDL
                     KPDQPRLLTVDNELVVPVNKVVHVLVTGADVIHSFAMPSFGIKIDAVPGRLNDTWFKA
                     TIEGTFHGQCSELCGKDHAFMPITIRVVNDNEFKTWVEAAKKKYAVDQSAPPTAIAAA
                     GASAR"
     gene            6749..8359
                     /gene="ctaD"
                     /locus_tag="VNY79_10145"
     CDS             6749..8359
                     /gene="ctaD"
                     /locus_tag="VNY79_10145"
                     /EC_number="7.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011475187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004129 - cytochrome-c oxidase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit I"
                     /protein_id="HWX72851.1"
                     /translation="MDTMTHVAHGDDNGHAIRHGWRRYVYSTNHKDIGTMYLVFALVA
                     GVIGGVFSILIRAELMFPGLQIFHETHYFDVAVTAHGLIMIFFMVMPAMIGGFGNWMI
                     PLMIGAPDMAFPRMNNISFWLLPASFALLVASMFFEGEPGATGAGTGWTLYAPLSTYG
                     HPGPAMDFVILSIHLAGASSILGAINFITTIFNMRAPGMTLHKMPLFVWSELVTVFLL
                     LLALPVLAGAITMLLTDRNFGTTFFSPDGGGDPLLFQHLFWFFGHPEVYILILPGFGM
                     VSQIVATFSRKPVFGYLGMAYAMVAIGGIGFVVWAHHMYTVGMSASVQAYFIAATMVI
                     AVPTGVKIFSWIATMWGGSIEFKTPMLWAVGFIFLFTLGGVTGVVLANAGVDRSLQDT
                     YYVVAHFHYVLSLGAVFAIFGGWYYWFPKMTGYMYSEPVGKLHFWLTFIGVNLVFFPQ
                     HFLGLAGMPRRIADYPDAFAGWNYISSIGSYISGFGVLVFFFGVAQAFIRKQHAGANP
                     WGAGATTLEWTLPSPPPFHQYDTLPLIR"
     gene            8356..9276
                     /locus_tag="VNY79_10150"
     CDS             8356..9276
                     /locus_tag="VNY79_10150"
                     /EC_number="2.5.1.141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020084471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008495 - protoheme IX farnesyltransferase
                     activity [Evidence IEA];
                     GO_process: GO:0048034 - heme O biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme o synthase"
                     /protein_id="HWX72852.1"
                     /translation="MSVTLTRVEPSIAGVGDYIELMKPRVMSLVVFTALVGLLIAPGH
                     VHPMAAFTALLCIAVGAGAAGALNMWYDADIDARMTRTAARPIPAGQVAPGEALAFGL
                     MLAVGSVVVLGLLINIIAAALLAVTIAFYVVVYTMWLKRRTPQNIVIGGAAGALPPVI
                     GWVAATGSIAVEPVLLFAIIFFWTPPHFWALSLYRTEDYVRAGIPMLPVVAGARETRR
                     QILLYTLLLAPLGVAPWLLGYAGLSYGVVALATGAIMIALALRVRVEEDRAHTASKQL
                     FGFSILYLFLLFAMLLVDHASGGLLSHCAA"
     gene            9291..9470
                     /locus_tag="VNY79_10155"
     CDS             9291..9470
                     /locus_tag="VNY79_10155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007599435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoxF protein"
                     /protein_id="HWX72853.1"
                     /translation="MVSVAMDEPKPEPGIKLTEQQQRARRARSIAIAVSLGVLVVLFY
                     VMTLVKGPGVLVRPL"
     gene            9481..10122
                     /locus_tag="VNY79_10160"
     CDS             9481..10122
                     /locus_tag="VNY79_10160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase assembly protein"
                     /protein_id="HWX72854.1"
                     /translation="MRGPANRGEQTGASHRDLLVGFLCGGMVAAMIGASFAAVPFYSW
                     FCRTTGYGGTTQVSKAAPAQISDRTITVRFDSNVAAGLPWRFEPERRSIDVKLGQVVT
                     VYYAVTNEAARATIGQAGYNVSPPTAGIYFEKVNCFCFTEQTMKPGEKRDMAVVFYVD
                     PKLATDSEQDGLNLITLSYTFYPVRPALAPAHVDAGKDQAVAGSTAAEKSGRI"
     gene            10182..11030
                     /locus_tag="VNY79_10165"
     CDS             10182..11030
                     /locus_tag="VNY79_10165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c oxidase subunit 3"
                     /protein_id="HWX72855.1"
                     /translation="MANAAHAKPHHDYHLVNPSPWPAVGATSGFIAAVGLILWMHHIV
                     AYAPLILGIGVIGIAYTMIGWWRDVIFEAEVEHDHTRVVQISHRYGMILFIASEVMFF
                     VAWFWAYFNTALFPDEVRDIARIAATGGVWPPKGIGTFDPWHLPLLNTLILLTSGTTV
                     TWAHHALLENNRKGLIWGLVCTIALGLTFTCVQAYEYAHAAFHYSGNIYGATFFMATG
                     FHGAHVIIGSIFLIVCLFRALAGQFKPTQHLGFEFAAWYWHFVDVVWLFLFACIYVWG
                     AGAHVE"
     gene            11176..11562
                     /locus_tag="VNY79_10170"
     CDS             11176..11562
                     /locus_tag="VNY79_10170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF983 domain-containing protein"
                     /protein_id="HWX72856.1"
                     /translation="MTEKPIDSLSGSILAGFACVCPRCSKGKMFQGFLTLRPRCEVCG
                     LDYGFADSGDGPAVFVMFLAGFIVVGAALVTEVVYKPPFWVHAVLWLPLILVVTLGPL
                     RPMKGLMIALQYHHKAAEGRFGGERS"
     gene            11559..12332
                     /locus_tag="VNY79_10175"
     CDS             11559..12332
                     /locus_tag="VNY79_10175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014498506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SURF1 family protein"
                     /protein_id="HWX72857.1"
                     /translation="MSPQTAKPRGWRGLLIPAALLFAVLIALGSWQIQRKTWKEGVIA
                     ALNERLAAPPLALPAPSAWPSLDQASDEYRRVTFSAELDHGRETLVYAAPSALRPDAS
                     GPGYWIFTPARLAGGGVVIVNRGFVPQADREGVARAPGQVAGRLEIVGALRWPERRTW
                     FSPSDDPNGNLWFTRDPRAIAAAKGLGSVAPFYVEQEGPAPPGGLPRPGKIVANMRNE
                     HLQYAFTWFGLAVVLLVAFGVWAFNSSGERPRRNAPQPP"
     gene            12497..13912
                     /gene="thrC"
                     /locus_tag="VNY79_10180"
     CDS             12497..13912
                     /gene="thrC"
                     /locus_tag="VNY79_10180"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011475194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004795 - threonine synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009088 - threonine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HWX72858.1"
                     /translation="MRHISTRGEAPSLGFAEAMLAGLARDGGLYVPECWPRLEPPTIL
                     GFSGMPYAEIAVEVIGRFIGDGIGAGDLARMAREAYGTFRHPAVAPITQLGVNTFALD
                     LFHGPTLAFKDLAMQLLARLMDHVLAARRERRTLVVATSGDTGGAAVEGFRDRAHVDL
                     IVLFPDGRISDVQRRMITTVAAVNVHAVAVDGTFDDCQAIVKGMFNHHAFRERVALSG
                     VNSINWARIVAQAVYYFTAAVSLGAPQRKIAFTVPTGNFGDVYAGYVASRMGLPVDRL
                     VIATNVNDILARTLATGTYEPRDVVPTTSPSMDIQVSSNFERLLFDAYRRDGGAIRTL
                     MAQLAQSGRFTLSASALSDIRALFAAGRANEEEVAATIRTVLRETGRFVDPHTAVGIA
                     VAEKEPRDPAVPMVVLSTAHPAKFPDAVEAACGQRPSLPEWLSDLDRRPERVTFLPAD
                     QEAVERFVLATSRAAQEGAAA"
     gene            13909..15180
                     /locus_tag="VNY79_10185"
     CDS             13909..15180
                     /locus_tag="VNY79_10185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006615627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pitrilysin family protein"
                     /protein_id="HWX72859.1"
                     /translation="MSVELTKLPSGINVITEAMPHLESASLGVWVNSGNRDESGDENG
                     ISHFLEHMAFKGTRRRTARQIAEEIEAVGGDLNAATGAESTAYYARVLKADVPLALDV
                     LADILSEPAFDRDELLREQNVIIQEIGAVADTPDDLIFEHLQGTAFPDQPLGRSILGT
                     PKTVRSFDRGKLCDHLARHYRAPDIVVAAAGAIDHRAVVAEAEKRFASFNGPEGPAPE
                     PAHFGGGTHVEKRELEQVHIALALAGVSQNDPALYSLQVFNNILGGGMSSRLFQEARE
                     KRGLCYSIYSFHVPYSDVGMFGLYAGTDAADTSELMRLIVDEVADCAETISEREIARA
                     KAQMKAGLLMALESSGARVEQLARQMIAWGRPIPLEELVAKVEAVTVDSARAAGRALM
                     ERGKLATAVLGLGSGLESAAAIAETLTRPAA"
     gene            15310..15894
                     /locus_tag="VNY79_10190"
     CDS             15310..15894
                     /locus_tag="VNY79_10190"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020181241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HWX72860.1"
                     /translation="MAFFRTINFSEPLPSIVGEGVVLRTPQMTDYNDWAALRERSREF
                     LTPWEPTWPADDLSRSAFRRRIRRYAEDLRSDQGYAFLIIRNSDDAIVGGLTLANIRR
                     GVAQAGSLGYWMGLPFARHGYMTAAVRAVIPFAFSTLRLHRLEAACIPSNAGSIRLLE
                     NTGFVREGYAREYLCINGIWQDHLLYGRLKDARP"
     gene            16010..16708
                     /locus_tag="VNY79_10195"
     CDS             16010..16708
                     /locus_tag="VNY79_10195"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72861.1"
                     /translation="MLGTRHLMSWRDRISVAAVLLLAVLAGGCSAGGIAPDTAGSDEA
                     PSRALGFFPESAVKSPQPMVGAQSDVNCPPIEVRQGASTLAIGPSGENTTMSLKYQGS
                     FVRVARDCSVAGSDMVIKVGVQGRIVVGPAGGPGEVQVPLRIAVVEEAPGGFKPIVTK
                     LVRIPVTVAPGQGNVVFSHIEQGMSFPLPTPSSQLDDYIVYVGFDPLAAEPKEPAKPK
                     PKGKPAPPKANPSQ"
     gene            complement(16755..17411)
                     /locus_tag="VNY79_10200"
     CDS             complement(16755..17411)
                     /locus_tag="VNY79_10200"
                     /inference="COORDINATES: protein motif:HMM:NF024811.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0008152 - metabolic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HWX72862.1"
                     /translation="MVIFDCNGVLVDSEPIARVVLAAAFSRVGVTLTPETVAREFHGR
                     RTADIFVAVEKTTKRSLPPNFAATVAAETLRRFRDELQPIPHAAHALTWIRGPKAVAS
                     SSAPDRVRTSLEVTGLMRFFESRLFSATHVADGKPAPDLFLAAAIQLEVAPADCIVVE
                     DSVPGIAAAKAAGMTAIGFIGSPHAGGRMVPELMAAGAHAVIADMRALASTIIELRGW
                     "
     gene            complement(17605..18087)
                     /locus_tag="VNY79_10205"
     CDS             complement(17605..18087)
                     /locus_tag="VNY79_10205"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195257.1"
                     /note="Produces ATP from ADP in the presence of a proton
                     gradient across the membrane. Subunit B is part of the
                     membrane proton channel; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP F0F1 synthase subunit B"
                     /protein_id="HWX72863.1"
                     /translation="MIEAEAWVAVAFVLFLGILVYVGAHRRVIDGIDQRQARIKAELE
                     EARRLREEAQALLVEYQRKRHDADREAEAIIATANAEAERLAAEGKTRLEDFVARRTK
                     MAETKIAQAEAQALADVRSSAADAAVAAAEKILSTTAKGKIADDLLARGIADLRKGFN
                     "
     gene            complement(18098..18634)
                     /locus_tag="VNY79_10210"
     CDS             complement(18098..18634)
                     /locus_tag="VNY79_10210"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HWX72864.1"
                     /translation="MAEPTAHSGAPEGGHGAFPPFQSEHFPSQLLWLALTFVLLYVLM
                     SRVALPRIGSILAERSRRIADDLKAAQGLKEQSEAASAAYEKALADARARAQSIANAT
                     RERQAAEAQESQKRIEAQLHERLAAAERSIAATRSAAMGNVRTIAADTTAAIVERLIG
                     KAPAKQEVAAALGQVIKQ"
     gene            complement(18644..18871)
                     /locus_tag="VNY79_10215"
     CDS             complement(18644..18871)
                     /locus_tag="VNY79_10215"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0045263 - proton-transporting ATP
                     synthase complex, coupling factor F(o) [Evidence IEA];
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HWX72865.1"
                     /translation="MDPTAAKYIGAGIACIGMGGAGVGVGIIFGNYLAAALRNPSAAQ
                     GQFGNLIFGFAITEALGIFSLLIALLLLFGL"
     gene            complement(18937..19689)
                     /locus_tag="VNY79_10220"
     CDS             complement(18937..19689)
                     /locus_tag="VNY79_10220"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015078 - proton transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HWX72866.1"
                     /translation="MTVDPIHQFQINNIVPIITIGKYQIYFTNSALFMLIIVVLVSAL
                     LIGATAPRAVVPGRLQSVAEMSYEFVANTVRSSAGTEGMKFFPFVFTLFMFVLFANMI
                     GLIPYSFTVTSQLIITATLALLVFFIVVIYGFWRNGLRFLKLFVPSGVPVYILPAIVV
                     IEVLSFVSRPVSHSVRLFANMLAGHITLQVFAGFIIMLAGFGVVGWLGAALPLILVIM
                     LTALEFLVAFLQAYVFAILTCIYLNDAIHPGH"
     gene            complement(19735..20118)
                     /locus_tag="VNY79_10225"
     CDS             complement(19735..20118)
                     /locus_tag="VNY79_10225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AtpZ/AtpI family protein"
                     /protein_id="HWX72867.1"
                     /translation="MSDGTRKDGERGKAATDEAALSARLQRLGEGLAREGATEPADDE
                     GVDRATTASGYARGFRLSSELVGGVLVGAGLGWLIDRLLGISPWGFIVFLLLGFAAGV
                     FNVMRSAGVMPGGTQGNDTSASRQQ"
     gene            20386..20856
                     /locus_tag="VNY79_10230"
     CDS             20386..20856
                     /locus_tag="VNY79_10230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72868.1"
                     /translation="MIDKVLATLIACLCLVVPVLPVWADEGTPEGEEGRYTFSKIADG
                     FIRLDMQTGEVSTCSQRTVGWACQAVPEDRAVLEKEIGRLRAENALLKRDLISRGLPL
                     PAGTMPEPPVVREDGRGLHRGGSDFDRMIAFMGRVWQRLVEAITQAQKQVLNKS"
BASE COUNT         3600 a         6698 c         6745 g         3876 t
ORIGIN      
        1 tgttgcgcgc gcggcttcgg caccctcgaa cgccgccatg cgcgcctcga acatggcgac
       61 ggtcggattg gcaaagcgcg agtattgaaa gcccgggtcc tcgttcttga accggcgctc
      121 ggcctggagc gagttgtcgt aaacgtagcc ctgggtcagg aacaacgcct cggaagtctc
      181 gccgaattgc gagcgcagta tgccggaatg gaccagacgg gtttcggggc ggtagcgatc
      241 accgtggcga tcatgggcgg acgctgacat gttgcctcct cctggccaag cagcggccaa
      301 gcaaaacaaa acccggccgg gagggtttaa tcctcgggcc gggctcacgc gtccccggcc
      361 ttttagcaag ttgttttacg tggctgcaag ccggccggct caaatgacca cgggataagc
      421 aatcccataa agctgttaat cgctgttgac aagcccccga ccgacgtttt agcgccccga
      481 ccgaacgcgt agggtaagcc acgggaaatg ggtgtcggaa tgtcagtccc tatggaagtc
      541 caagaggagc tcctgcctct ggagactccc gaggataatc tctcactcaa ttctgggatt
      601 ctacccgcgc aatggattaa acgcctcttc gaaagaggcc aaattacatc gaggcaactc
      661 gaccggaatc agatacagcc tgcaagccta gacctgcgcc ttggcaaagt tgcgtacaag
      721 attcatgcaa gctttctgcc aggcctcagc tcttcggttc agcaacgtgt tgagcgactg
      781 acgtcgtacg aaatcgactt gtccacgccg caagttctga cgaaggggtc tgtgtatcta
      841 atcgagatcg aggagacttt gaatttagga agttcgatct ctgggatcgc aaatccgaag
      901 agctcgactg gtcggttgga tgtcttcacg cgtataatcg cgaacaagag cgacgtcttt
      961 gatgttgtcc ccgccaacta cacgggaaaa ctttgggcgg aggtctcccc gcgaaccttt
     1021 gacgtgatgg tgcgcagggg aacacgctta agccagttaa gatttcgaag gcggacatcc
     1081 agtcagcacc cccatgcaac ttttcgcctc aacgatactg aacttgaggc tctccatgat
     1141 cgttcgcggt tgactgacga aacccctatt atccgccagg ggctcaatct acgggtcaat
     1201 ctaaccaggg acaacggtaa aaatattgtt gcctatcgag caaagaagta cactagcttc
     1261 atcgatatgg acaaagttgc tgtttatcgt gcagaagatt tctgggacgc aattgaacca
     1321 accagcgagg gtaacctgct tctaagtccc ggcgaatttt atattctcgc gtcgaaagaa
     1381 aagttgcaca tccccgctga ccatgcggca gaaatggtag cgatcgatcc ggttatgggc
     1441 gaatttcggg tgcattatgc gggttttttc gatcctgggt tcggtcaaac cgcccagcaa
     1501 ggacccggaa gcaaggcggt tctggaggtg cgtacgtatg atattccttt ttacttagag
     1561 gatgggcaga ccattggcag actagcattc gagaagttga gtgaaaggcc aagcgcagaa
     1621 tacggtgatg cgatcgcgtc caactaccaa ggtcaacgtt tgaagttatc caaacacttt
     1681 ttgaactctt agcgggcccg gcctgaaggg aactatttgc gtggagtttg tcttctccgc
     1741 caccagtctt tgaactggac tatcggcgtg gtgaaagcgc catatttcgt tacttcccac
     1801 tcacgtttca ggatagtgcg agccaacgca actgacgtcg caagttgttc ttgatcaaca
     1861 gcctctcctc gaaccatcag gagcggctct agcgattttg ccaactcgtt gtggagcgtc
     1921 tcgctcatat tgagccgcat gagaatcttc cggtgcgcga gcaacacgtc gttccgcgct
     1981 ttttgttgct cttccagact actgacgtcg ccgccgtgcg cgatcatcgc catcctaaaa
     2041 tgtattacgt cgatggcggt aaaaaacgcg gccaagtcgt ctctaagtcc attgatccag
     2101 gcttgacgat gattgctaat cgtcaccgat ctagcaatca gagcggcagc gatggcggca
     2161 acgacgccga gaattgccgg catcatagca ttttgatccc gcggggtgga aggttgaaca
     2221 tagtcgtgtc taccagtaaa gattgcggtc ggctagaata taatacgcac aggtgaaacc
     2281 cgcctgacta tgccgcggag atggtgccgt tcgatccgct ggtcggcgaa ttccgcgttc
     2341 actacgccgg cttcttcgat cccggtttcg gctatgccgg ggccggcggg ttcgggtcgc
     2401 gagccgtcct tgaggtgcgc tcccgcgagg tgccgttcat tctcgagcac gggcagatcg
     2461 tcggccggct ggtctacgaa aagatgctgg cgcgtccgga ccagctttac ggcagcggca
     2521 tcgggtcgaa ctatcaggcg cagggattga agctgtccaa gcacttccgc agttgagcga
     2581 ccggacgcct gcggccgtcg aattcagcgg atgagcgcga aaatcttgtg gcgcatcggc
     2641 gtaaacggcg ctttgttcct acggggcgtc gccggatagg attgggcggg ccaatgcggg
     2701 cacttgttct ctgcttcgcc gtcgtcatca ccgccgcggc tttgatcgcc gcctcgatcg
     2761 tgccggccgc ggcgcaatcc ggctacgacc ggccgggcgg cgattacgca agcgccgcgg
     2821 tcacgggcgg cgatccagcc atatgcgccg cccgctgcga gcacgacagg cgttgccgcg
     2881 cctggagctt ttcgtatccg acttcttcgg acggaccggc aatgtgctgg ctcaagcacg
     2941 agatcgcgcc ggccgtgaag gcgagctgct gcgtgtcggg cgtgcgcggc gccggcgtca
     3001 tcgagccgcg gcttggcgaa ctcgagtact cgatcgaccg catcggcggc gactacaaga
     3061 atttcgagac cactcccgac gcgcacggca aggcctgcgc cgaggcttgc cagggtgaca
     3121 cgcgctgccg cgcctggacc tatcggcgcc agggctatgg cacggcaacc gcgcggtgtt
     3181 atctcaagga catggtcaag ccgccgcgtt cccggccgtg ctgcatttcc ggagtggtga
     3241 gatagtgcag tcgcaccaca cgccggtgaa gccaaaaacc gaaaaatcag ctccttgaag
     3301 atccggtgcg cgtcagcctg tgccgccgac ggtgatgcgg tcgatgcgca gggtgggctg
     3361 gccgacgccg acgggcacgc cctggccgtt cttgccgcag gtgccgatgc cgtcgtcgag
     3421 cgcgagatca ttgccaacca tggagatgcg gttgagatcg gtcggcccat tgccgatcag
     3481 cacggccccc ttgatcggcg caccgcgctt gccgttctcg atgcggtagg cctcggtgca
     3541 ttcgaacaca tacttgccgg aagtgatgtc gacctggccg ccgccgaaat ggacggcata
     3601 gatgccgttc ttcaccgagg cgatgatctc gtcgggctcg tgggtgccgg cgagcatgta
     3661 ggtgttggtc atgcgcggca tcggcacgtg ggcgaagctc tcgcgccggc cgttgccggt
     3721 gggcttcatt cccatcagcc gtgcgttctg ccgatcctgc atgtagccga cgagcacgcc
     3781 gtcgtcgatc aagacggtgc ggttggtcgg cgtgccctca tcgtcgatcg agagcgagcc
     3841 gcggcgcgcc gctatggtgc cgtcgtcgac gaccgtgatg cctttcgccg cgacgcgctg
     3901 ccccatcagc ccggcaaagg ccgaggtctt cttgcggttg aagtcgcctt cgagcccgtg
     3961 gccgatggcc tcgtgcagca tgaccccggg ccagcccgag ccgagcacca cgtccatttc
     4021 gccggccggc gccggcaccg cttcgaggtt ggtgagagcc tgccgcaccg cggtatcgac
     4081 cgcgttctgc caagtatggg cgacgacgaa gcgctcgtag ccttcacggc cgccgtagcc
     4141 ggcgctgccg gcctcctgcc ggtcgccgtc gccgaccacg accgagacat tcacgcggac
     4201 gagcggacgg acgtcgcggt aggtctcgcc gtcgctgcgc acgatctcga ccgcctgcca
     4261 ggtggcgcca aggctgaccg agacctggcg cacacgcggg tccttcgccc gcgcgtaggc
     4321 gtcgatggtt tccagcaatc gcgccttggc ctcgaaagcc gggctgccga gcgggctctc
     4381 ttcactgtag agcttcacgt tggtgcgcgc cggcggtccg gcatagtgac cggaatagcc
     4441 gcccttgacc gcgcggacgg catccgcggc gcgggcgatg gccgcttccg acacatccga
     4501 agcgtgcgca tagccgaccg cttcgtcctt gaccgcgcgc aggccgaacc cctgagaggt
     4561 gtcgtaggtc gcctgcttca gccgcccgtt gtcgaacacg agcatctccg cctggcggta
     4621 ttcgagaaag agttcgccgt cgtcggcgcc ttcgaggccg cgggagatga tcttggcgag
     4681 gcgcggccgt tcgaggccgg cgcgatcgac cagcgaggtg ggggcagacg tcatgcgagg
     4741 ctccggcttt cggatcgggt ccgccctaga gataggcgat gccggcggca tttgcagcgg
     4801 ggagccggcg ttggcggccg tttacggcag cttgtcgaag ccttcgccga accccttgag
     4861 gctcatcggg aagccgatgc cttcttcggg cgtctggaaa atgatgaagg tggacgtctg
     4921 gccgttgcgc agctggttga tcaggttgtc gtccatgacc acctcggcga cgcagccgtt
     4981 gggcaggcag cgcacgaagc cggcccggcc gacgtcgttg ctgtcgatct tgaggccgag
     5041 gcccgacggc agcaggacgc cgagcggagc gacgacccgc ataagccggc tcttctgatc
     5101 ggtcgtcttc agcacgatga cggtcaagcc gacattgggc cggtcctctg ccgtcacgct
     5161 ctgcatcagc gcgcattgct cgccttgagc gccgggcggc gtgtcgcagc ggatttgcca
     5221 gtcgccatga accgagcgga ccgcaccttg agccgcggcg tgagtggcga ataacgaggt
     5281 tgccgcgagc gagatggcgg cgccggcgag cgccggggcg attggtcgca ttcgccgcgc
     5341 gacgtcgaag atccccatga tttgttcccc cgaccagccg ccccaaggcc gccccgacag
     5401 gctttccggc gcgaatcacc gaaagggcag gtcgccgacg cgagcctgcc tacatggtga
     5461 gcccacggtg tcaagatcgc atcaagatca agccattgtg gccgcgcgaa ggacgcggga
     5521 aacagcgccg tcgcgcgccg ccgggccgcc gcgactgcgt gcctgcgcca cagtgacgag
     5581 tgcattgcgg cagggcgcga tttgtggttt gaggggctgg gattcccccg tcccgccgat
     5641 gcccgtcaat gaccagaccc gtggcaaaac ccggccggca actggcagcg tcggccgtta
     5701 ccgttttgcg caaacatgtg tttggcatac gtgtttgccg cctggcgggc gcgaccgatg
     5761 aagggccgcg accggactga aggaagaccg aggagagccg agaaggagat gccggtgttc
     5821 gcacgcttga gcgcatgggc gctgaccgtc ggggcgttgg tcgcgagcgc gggaggggca
     5881 tgggcggctc tgggccaccc gacgccttgg cagctcggcc tgcaggatgc ggcaacgccg
     5941 gtcatggcgg acatcgcctg gtttcacgat tatctgcttt ggatcatcgc cgccatcacc
     6001 gccttcgtgc ttattctgct cggcatcatc gtggtgcgct tcaatgccag cgccaatccg
     6061 acgccgacgc gcaccacgca caacacgctg ctcgaggtcc tgtggacgat cgttccggtc
     6121 gtcatcctgc tgttcatcgc cgtcccctca ttccggctgc tctttgtgca gctcgaagtg
     6181 ccgaagccgg acctcacgat aaaggcgacc ggcaagcagt ggtattggag ctacacctat
     6241 cccgacaacg gcaacttcga attcgattct ctcatcgtcg cggagaagga cctgaaaccc
     6301 gatcagccgc gccttctgac cgtggacaac gagctggtcg tgccggtcaa caaggtcgtg
     6361 catgtgctgg tgaccggcgc cgacgtgatc cattctttcg cgatgccctc gttcggcatc
     6421 aagatcgacg ccgtccccgg ccggctcaac gacacctggt tcaaggcgac gatcgagggc
     6481 acgtttcacg gccaatgctc ggagttgtgc ggcaaggatc acgccttcat gcccatcaca
     6541 atacgcgtcg tgaacgacaa cgagttcaag acgtgggtcg aggcggcgaa gaagaaatat
     6601 gccgttgacc agagcgctcc gccgaccgca attgcggcgg ccggggcttc ggcgcggtga
     6661 cgatcttcct cccgcattcc ccgctgccgc aggtgcgggg gagggtcggg aggactgcta
     6721 caggcaggga cggacgtagg gactgacaat ggatacgatg acgcacgtag cgcacggcga
     6781 cgataacggg cacgccatcc ggcacggctg gcgccgttat gtctattcga cgaaccacaa
     6841 ggacatcggc acgatgtacc tcgtgttcgc gctcgttgcc ggcgtgatcg gcggcgtgtt
     6901 ctcgatcctg atccgcgccg agctgatgtt ccccggcctg cagatcttcc acgagaccca
     6961 ctatttcgac gtggccgtga ccgcgcacgg gctgatcatg atcttcttca tggtcatgcc
     7021 ggcgatgatc ggcggcttcg gcaactggat gatcccgctg atgatcgggg cgccggacat
     7081 ggcgttcccg cgcatgaaca acatttcgtt ctggctgctg cccgcgtcct tcgctttgct
     7141 ggtggcgtcg atgttcttcg agggcgagcc cggcgccacc ggcgccggaa ccggatggac
     7201 gctctacgcg cccctttcca cctacggcca tcccggcccg gcgatggact tcgtcatcct
     7261 ctcgattcat ctcgccggcg cctcctcgat cctgggcgcg atcaatttca tcaccacgat
     7321 cttcaacatg cgcgcgcccg gcatgacgct ccacaagatg ccgttgttcg tatggtcaga
     7381 actcgtgacc gtgttcctcc tgctgctggc gctgccagtg cttgccggcg ccatcaccat
     7441 gctgctcacc gaccgcaatt tcggcaccac tttcttttcg ccggatggcg gcggcgatcc
     7501 gctgctgttc cagcacctgt tctggttctt cggccatccc gaggtctaca tcctcatcct
     7561 gcccggcttc ggcatggtga gccagatcgt ggcgacgttc tcgcgcaagc cggtattcgg
     7621 ctatctcggc atggcctatg ccatggtggc gatcggcgga atcggcttcg tcgtctgggc
     7681 gcaccacatg tacacggtcg gcatgtcggc gagcgtgcaa gcctatttca tcgccgccac
     7741 gatggtgatc gcggtgccga ccggggtgaa gatcttctcc tggatcgcca cgatgtgggg
     7801 cggctcgatc gagttcaaga cgcccatgct gtgggcggtc gggttcatct tcctgtttac
     7861 gctcggcggc gtcaccggcg tcgtcctcgc caatgccggc gtggaccgct ccctgcagga
     7921 cacctactac gtcgtggcgc acttccacta cgtgctttcg ctcggcgccg tgttcgccat
     7981 cttcggcggc tggtactact ggttcccgaa gatgaccggc tatatgtaca gcgagccggt
     8041 cggcaagctg cacttctggc tgaccttcat cggcgtcaat ctcgtgttct tcccgcagca
     8101 cttcctcggc cttgccggga tgccgcgccg cattgccgac tacccggatg cgttcgccgg
     8161 ctggaactac atttcctcga tcggctcgta catttccggg ttcggcgttc tcgtcttttt
     8221 cttcggcgtg gcgcaggcct tcatccgcaa gcagcacgcg ggcgccaatc cgtggggtgc
     8281 cggcgcgacg acgctggaat ggaccctgcc gtcgccgccg ccgttccatc agtatgacac
     8341 gctgccgctg atccgatgag cgtcaccctt acccgcgtcg agcccagcat tgcgggcgtc
     8401 ggcgactaca tcgagctgat gaagccgcgg gtcatgtcgc tcgtggtgtt caccgcgctc
     8461 gtcggccttc tgatcgcacc gggccatgtg catccgatgg cggccttcac cgcactcctt
     8521 tgcatcgccg tcggcgccgg cgccgcgggc gccctgaaca tgtggtacga cgccgacatc
     8581 gatgcgcgga tgacgcgtac cgcggcgcgt ccgattccgg ccgggcaggt ggcgcccggc
     8641 gaagcgctcg ccttcggcct gatgcttgcg gtcggctcgg tggtcgtgct cggccttctg
     8701 atcaacatca tcgccgccgc gctgctggcg gtgaccatcg ccttctacgt cgtcgtctac
     8761 acgatgtggc tcaagcgccg caccccgcag aacattgtca tcggcggcgc agccggcgcg
     8821 ttgccgccgg tgatcggctg ggtggcggcg accggaagca tcgcggtcga accggtcctg
     8881 ctctttgcca tcatcttttt ctggacgccg ccgcatttct gggcactgtc gctctatcgc
     8941 accgaggatt atgtccgcgc cggaatcccc atgctcccgg ttgtcgccgg cgctcgcgag
     9001 acgcggcggc agatcctgct ctatacgctg ttgctcgcgc cgctcggcgt cgcgccctgg
     9061 ctcctgggct acgccggctt gagctatggc gtcgttgcgc tcgcgaccgg cgcgatcatg
     9121 atcgcgctgg cgctgcgcgt gcgtgttgag gaagaccgcg cccacaccgc aagcaagcag
     9181 ctgttcggat tctcgatcct ttatctcttc ctgctgttcg ccatgctgct ggtcgaccac
     9241 gcgtcgggag ggctgctcag ccactgtgcg gcatgacgac aatggacgga atggtgagcg
     9301 tcgcgatgga cgagccgaag ccggagcctg gcatcaagct gaccgagcag cagcagcgtg
     9361 cgcgccgcgc ccgctcgatc gccattgccg tgtcgctcgg cgtgctcgtg gttctgttct
     9421 acgtcatgac cctggtcaaa ggcccgggcg tgctggtgcg gccgctgtag gacacacccg
     9481 atgcgtggac cggccaaccg aggcgaacag accggcgcga gccaccgcga cctgctcgtc
     9541 ggattcctct gcggcggcat ggtcgccgcc atgatcggcg cgtcgtttgc cgcggtgccg
     9601 ttctacagct ggttctgccg caccaccggc tacggcggca ccacgcaggt ttcgaaggcg
     9661 gctcccgcgc agatttccga ccgcacgatc acggtgcgct tcgattcgaa cgttgccgcc
     9721 gggctgccgt ggcggttcga gccggagcgc cggagcatcg acgtcaagct cggccaggtg
     9781 gtcaccgtct attacgcggt caccaatgaa gccgcacgcg cgaccatcgg ccaggccggc
     9841 tacaatgtca gcccgccgac ggccggcatc tacttcgaga aggtcaactg cttctgtttc
     9901 accgaacaga ccatgaagcc gggcgagaaa cgggacatgg cggtcgtctt ctatgtcgac
     9961 cccaagctcg ccaccgattc ggagcaggac ggtctcaacc tcattaccct ctcctacacc
    10021 ttctatccgg tgcgtcccgc gctcgcgccc gcgcatgtgg acgcgggaaa ggatcaggcg
    10081 gtggcgggga gcacggcggc ggagaaatcc ggccgcattt gagttaggca acgaaggcgg
    10141 cgcggcaagc gacgccccgc gccaagctgg agacgataac gatggccaat gctgcgcatg
    10201 ccaagccgca ccacgactat cacttggtca atccgagccc gtggcccgcg gtcggcgcga
    10261 cttcggggtt catcgccgcc gtcgggctga tcctgtggat gcaccacatc gtcgcctacg
    10321 ctccgctcat ccttggcatc ggcgtcatcg gcatcgccta caccatgatc ggctggtggc
    10381 gggacgtgat cttcgaggcc gaagtcgaac acgaccacac ccgcgtggtg caaatctcgc
    10441 accgctacgg gatgatcctg ttcatcgcgt cggaggtgat gttcttcgtc gcctggttct
    10501 gggcctactt caacaccgcg ctgttccccg atgaggtgag agacatcgcc cgcatcgcgg
    10561 cgaccggcgg ggtgtggccg cccaagggca tcggaacgtt cgacccctgg catctgccgc
    10621 tgctcaatac gctgatcctg ctcacctcgg gcacgacggt cacctgggca caccatgcgc
    10681 tgcttgaaaa caaccgcaag ggattgatct gggggctcgt ctgcaccatc gcgctcggcc
    10741 tcaccttcac ctgcgtgcag gcctacgaat atgcgcatgc cgcctttcac tattcgggca
    10801 acatctatgg cgccacgttc ttcatggcga ccggatttca cggcgcccac gtcatcatcg
    10861 gttcgatctt cctgatcgtg tgcctgttcc gggcgcttgc cggtcaattc aagccgaccc
    10921 agcacctcgg cttcgagttt gccgcctggt actggcattt cgtcgacgtg gtgtggctgt
    10981 tcctctttgc ctgcatatat gtctggggcg ccggcgctca cgtcgaatag cgccacgcgc
    11041 tgaagcttga gcggatcgga cgctgatccg attcgcttgg ccttccgcgg gttctcccgc
    11101 tcgctcacgc gaacgcgtga tcaaattcgg gcgcccgaac tcgatcaccc tggtcaggcc
    11161 gggcaaagcg cagtcatgac ggaaaaaccg atcgactcac tttcgggatc gatccttgcc
    11221 ggcttcgcgt gcgtgtgccc gcggtgcagc aaaggcaaaa tgttccaggg attcttgact
    11281 ctgcggccgc gatgcgaggt ctgtggcctc gactatggct ttgccgattc cggcgacggt
    11341 cccgcggtct tcgtcatgtt cctcgccggc ttcatcgtcg tcggcgccgc gttggtgacc
    11401 gaggtggtct acaagccgcc cttctgggtg catgccgtgc tgtggctgcc gttgatcctc
    11461 gttgtgacgc ttgggcccct gcggccgatg aaagggctga tgatcgcgtt gcagtatcat
    11521 cacaaggccg cggaagggcg cttcggcggc gagcggtctt gagcccgcag acggcgaagc
    11581 cgcgggggtg gcgcggcctg ctcatcccgg cggcactact cttcgcggtc ctgatcgcgc
    11641 tgggaagctg gcaaattcag cgcaagacct ggaaggaagg cgtgatcgcc gcgctgaacg
    11701 agcggctcgc ggcgccgccg ttggcgttgc cggcgccgag cgcatggccg agcctcgatc
    11761 aggcaagcga tgaataccgg cgcgtgacat tcagcgccga actcgatcac ggccgggaga
    11821 ccttggtcta cgcggcaccg tcggcgttgc gaccggacgc ctccgggccg ggctattgga
    11881 tcttcacccc ggcgcgcctc gccggcggcg gggtcgtgat cgtcaatcgg ggcttcgtac
    11941 cgcaggccga ccgcgaaggc gttgcgcgcg cccccggcca agtggcgggg cgcctcgaga
    12001 tcgtcggcgc cctgcgctgg ccggagaggc gtacctggtt ttcgccaagt gacgatccga
    12061 acggcaattt gtggttcacc cgggacccgc gtgcgatcgc cgccgccaag ggacttggct
    12121 ccgtggcgcc cttctatgtg gagcaggaag ggccggcgcc gcccggcgga ttgccgcggc
    12181 ccggcaagat cgtggcgaac atgcggaacg aacacctgca atatgcattc acgtggttcg
    12241 gcctcgccgt cgtcctcctg gtcgcgttcg gcgtttgggc gttcaattcg agcggcgagc
    12301 gcccccgccg gaacgccccg cagccgccct gagagctatc tacgtttctt gtgaaagtgc
    12361 gggcttttct attagtgtgc ccgcgtgagg gtgcggtggc cgggtggctg tccgcaagaa
    12421 atgagcgtaa attcagtacc ttagccgggc gtcacatcgc cgaccacgcg gacgccgccg
    12481 gccacaggaa gaagacgtgc gccatatttc gaccaggggg gaagcaccgt cgctcggctt
    12541 cgccgaggcg atgctcgcag gcctcgcccg cgatggcggc ctctacgtgc cggaatgctg
    12601 gccgcggctt gagccgccga cgatcctggg cttcagcggc atgccttatg ccgaaatcgc
    12661 cgtcgaggtg attgggcgtt ttatcggcga tgggatcggt gctggcgatc tcgcccgcat
    12721 ggcgcgcgag gcgtacggca cctttcgcca tcccgccgtc gcgccgatca cgcaactcgg
    12781 cgtgaatacc tttgcgctcg atctcttcca tgggcctacg ctcgccttca aggatttggc
    12841 gatgcagctt ctggcgcggc tgatggatca tgtgctcgcc gcgcgccgcg aacgccggac
    12901 gctggtagtc gcgacctccg gcgataccgg cggtgcggcc gtcgaagggt ttcgcgaccg
    12961 cgcccatgtc gacctgatcg ttctgttccc cgacggccgc atctccgacg tgcagcggcg
    13021 catgatcacg acggtcgcgg cggtcaacgt ccacgcggtc gccgtcgacg gcaccttcga
    13081 cgactgccag gcgatcgtga agggcatgtt caaccaccac gcttttcgcg aacgggtggc
    13141 gctgtccggc gtcaattcga tcaactgggc gcgcatcgtg gcgcaggccg tctactactt
    13201 caccgccgcc gtgtcgcttg gcgcgccgca gcggaaaatc gccttcactg ttccgaccgg
    13261 gaatttcggc gacgtgtacg ccggctacgt cgcctcgcgc atgggtctgc cggtcgaccg
    13321 gctggtcatc gcgaccaatg tcaacgacat tctcgcccga acgctcgcca ccggcacgta
    13381 cgaaccgcgc gatgtggtcc cgaccacctc gccgtcgatg gacatccagg tttcgtcgaa
    13441 tttcgaacgg ctgctgttcg acgcctatcg ccgtgacggc ggcgccattc ggaccttgat
    13501 ggcgcagctc gcgcaatcgg ggcggtttac gctctcggcg tccgccttgt ccgacattcg
    13561 cgcgctgttc gctgccggcc gcgccaatga ggaggaggtc gccgcgacca tccgcaccgt
    13621 gctgcgcgag acaggccgtt tcgtcgatcc gcacacggcg gtcggcattg ccgtcgccga
    13681 gaaggagccg cgcgacccgg ccgtgccgat ggtggtgctg tcgaccgcgc atccggccaa
    13741 gttccccgat gcggtggagg cggcctgtgg acagcggcct tcgctcccgg aatggctttc
    13801 cgatctcgat cggcgcccgg agcgggtcac gtttttgccg gcggatcagg aggcggtcga
    13861 gcgctttgtc ctggcgacga gccgggcggc gcaagaagga gcggcggcat gagcgtcgag
    13921 ctgacaaagc tgccgtccgg catcaacgtg atcaccgaag cgatgccgca tctggaatcg
    13981 gcctcgctcg gcgtgtgggt caattccggc aatcgcgacg aaagcggcga cgaaaacggt
    14041 atctcgcact tcctcgagca catggccttc aaaggcacgc ggcggcgcac cgcgcgccag
    14101 atcgcggaag agatcgaggc cgttgggggc gacctcaacg cggcgaccgg agccgagagc
    14161 acggcctact acgcgcgtgt gctcaaggcc gacgtgccgc tcgccctcga tgtccttgcc
    14221 gacattctct ccgagcccgc cttcgaccgc gacgaactgc tgcgcgagca gaacgtcatc
    14281 atccaggaaa tcggcgccgt ggccgacacc ccggatgatc ttattttcga gcatctccag
    14341 ggcaccgcgt ttcccgatca gccgctcggc cgctcgattc tgggcacgcc caagaccgtg
    14401 cgctcgttcg accgtgggaa attgtgcgac cacctggcgc ggcactaccg ggcgccggac
    14461 atcgtggtgg cggcggccgg cgcaatcgat caccgggcgg tggtcgccga ggcggagaag
    14521 cgcttcgcga gcttcaacgg tcctgagggg ccggcgccgg agccggcgca cttcggtggc
    14581 ggcacgcatg tggagaagcg cgaactcgag caggtgcaca tcgcactcgc tctggccggg
    14641 gtatcgcaga acgaccccgc gctctacagc ctgcaggtct tcaacaacat cctcggcggt
    14701 gggatgtcct cgcggctgtt ccaggaggcg cgggagaagc gcggcctgtg ctactcgatc
    14761 tattcgttcc atgtccccta cagcgacgtg ggcatgttcg gcctctatgc cggcaccgac
    14821 gccgccgata cttcggagct gatgcgtctc atcgttgacg aggtcgccga ctgcgccgag
    14881 accatttccg agcgggagat cgcgcgcgcc aaggcgcaga tgaaagccgg actgctcatg
    14941 gctttggaga gttcgggcgc ccgagtcgag cagctcgcgc gccagatgat tgcgtggggc
    15001 aggccgattc cgctcgaaga gctggtggcg aaggtcgagg cggtgacggt cgacagtgcg
    15061 cgcgcagcgg ggcgcgcgct catggaacgc ggcaagctgg cgaccgcggt gctcgggctc
    15121 ggctcgggcc tggaaagcgc ggcagccatc gccgagactc tcacccgccc ggcggcatga
    15181 tgatgcggag atctggatga cggaccctgc tcgtcagctg ttcggccgcc gcccggtcca
    15241 ttgcgcggca gccgctcgat tcctgctcgc ggcggaaggc gcggacagcg gataaaacca
    15301 cggccgtcca tggcgttctt tcgcaccatc aacttctccg agccgctgcc gtcgatcgtc
    15361 ggggaaggcg tcgtgctgcg cacgccgcag atgaccgact acaacgattg ggcggcgctg
    15421 cgcgaacgaa gccgcgaatt tctcacgccc tgggagccga cttggccggc cgacgatctc
    15481 agccgcagcg cgttccgacg ccggatcagg cgctatgccg aagacctgcg cagcgaccag
    15541 ggctatgcct tcctgatcat tcgcaactcg gacgacgcga tcgtcggcgg gttgacgctc
    15601 gccaacattc ggcgcggggt cgctcaggcg ggcagcctcg gctactggat gggcctgcca
    15661 tttgcccgcc acggctacat gaccgcggcg gtgcgcgccg tcattccatt cgccttcagc
    15721 acgctgcggc tgcaccgcct cgaagccgcc tgcattccca gcaatgccgg ctcgatccgc
    15781 cttctcgaaa acacgggctt cgttcgcgag ggttatgcgc gcgaatatct gtgcatcaac
    15841 ggcatctggc aggaccatct gctctacggc cggttgaaag atgcaaggcc gtgaccgagc
    15901 ctaccgcggt cacggagtcg cagggggaaa agcgggcctt gggatggcca cggttcgttt
    15961 gctatagttt tttcggtatc acgcgaaatc tggcgatgaa ttcgggggaa tgctgggaac
    16021 ccgccacctg atgagttggc gcgaccgtat ctcggtcgcg gctgtgctgt tgcttgcggt
    16081 cctcgccggc ggatgttcgg ccggcggcat cgcgccggac acggccggct cggacgaagc
    16141 cccttccagg gcgctcggct tcttccccga gtccgcggtg aagtcgccgc agccgatggt
    16201 cggcgcgcaa tcggacgtca attgcccgcc catcgaagtc cgccagggcg cctccacgct
    16261 ggcgatcggt ccttcaggcg aaaacacgac gatgtccctg aaatatcagg gcagctttgt
    16321 gcgcgtcgcg cgcgactgtt cggttgccgg cagcgacatg gtgatcaagg tcggcgtgca
    16381 ggggcgcatc gtcgtcggac ctgccggcgg tcccggggag gtccaggtcc cgctgcggat
    16441 cgccgtggtc gaggaagcgc cggggggctt caagccgatc gtgaccaagc ttgtccgcat
    16501 tccggtgacg gtcgcgcccg gccagggcaa cgtggtgttc agccatatcg agcaggggat
    16561 gagtttcccg ttgccgacgc catcgtccca gctcgacgac tatatcgtct atgtcggctt
    16621 cgatccgctc gcggccgaac cgaaggaacc ggcgaagccg aagccgaaag gcaaaccggc
    16681 gccgcccaag gccaatccga gccagtgagc gtagctgccg cgacgcggcg gcacagacgc
    16741 cgtacgggga agcgctacca gccgcgcagt tcgatgatgg tgctggccag agcccgcatg
    16801 tcggcgatca cagcgtgggc gccggcggcc atgagttccg gcaccatacg gccgccggca
    16861 tgcggcgagc cgatgaagcc gatcgcagtc atgcctgcgg ccttggccgc ggcaattccg
    16921 ggaaccgaat cctcgaccac gatgcagtcg gcgggagcga cctcgagctg aatggctgcg
    16981 gcaagaaaca gatcgggggc cggcttgccg tcggcgacgt gggttgccga gaacagccgc
    17041 gattcgaaga aacgcatgag gccagtgact tcgaggctgg tgcggacgcg gtccggggcc
    17101 gaggaggagg cgacggcctt cggccccctg atccaggtca gcgcatgggc ggcgtgggga
    17161 attggttgca gctcgtcgcg gaagcgccgc agtgtctccg ccgcaaccgt ggctgcgaag
    17221 ttgggcggca ggcttcgctt cgttgtcttc tctacggcga caaaaatgtc agccgtccgc
    17281 cgtccgtgaa attcacgggc caccgtttcc ggcgtcaacg tcacgccgac ccggctgaaa
    17341 gccgcggcga gcaccacgcg ggcaatcggc tcactatcga ctagtacgcc attgcaatcg
    17401 aagatgacca agggtccctc cgatgctccg gccaacgtga ggcgggcggt tgtctgttaa
    17461 cgaatcacgc ggcgagaata tcgctcggcg gcggtaagca aagaccgcgc ctcgcgatga
    17521 cagcaaatta tgcacaggaa cggatcggga cctgccgggc tgcgaccggc ctgtccggcc
    17581 gcgccgcgca tcggtagagc cgccttagtt gaatcctttc ctgaggtcgg cgatgccgcg
    17641 ggcgagcaga tcgtcagcga tcttgccttt cgccgtcgtg gaaaggattt tctcggccgc
    17701 ggcgaccgcg gcatcggccg ccgaggagcg tacgtccgcc agcgcctgcg cctcggcctg
    17761 agcaatcttg gtttccgcca tcttggtgcg ccgcgcgaca aaatcctcca gcctcgtctt
    17821 gccctcggcg gcaaggcgct cggcttcggc attggcggtg gcgatgatgg cctcggcctc
    17881 acggtcggcg tcgtgccgct tgcgctggta ttcgacgagc agcgcctgcg cctcttcccg
    17941 caggcggcgg gcttcctcga gctcggcctt gatgcgcgcc tggcgctgat cgatcccgtc
    18001 gatcacccgg cgatgcgcgc ccacgtaaac gagaatgccg agaaagagca cgaaagcgac
    18061 ggcaacccag gcttcagctt cgatcatgga gcaaacctta ttgcttgatc acctggccca
    18121 aggcggcggc gacctcctgc ttggccggtg ccttgccgat caggcgctcg acgatggccg
    18181 ccgtggtatc cgctgcgatc gtgcgcacat tgcccatggc ggcactgcgg gtcgcggcga
    18241 tcgatcgctc cgccgccgcg agccgctcgt ggagctgggc ctcgatgcgc ttctgcgatt
    18301 cctgcgcctc tgcggcttgc cgctcacgcg tcgcgttcgc gatcgattgg gcgcgggcgc
    18361 gggcgtcggc gagcgccttc tcgtaggcgg cactggcagc ctccgactgc tccttgaggc
    18421 cttgcgccgc cttgaggtcg tcggcaatgc ggcggcttcg ctcggcgagg atcgagccga
    18481 tgcgcggcaa cgccaccctc gacatcagca cgtagagcag gacgaaggtc agcgccagcc
    18541 aaaggagctg cgacgggaaa tgctccgact ggaacggcgg aaaggcgccg tgtccgcctt
    18601 cgggcgctcc gctatgggcg gtcggctcgg ccatgacggc gcgtcagagc ccgaacagaa
    18661 gcaggagagc gatcaacagc gagaaaatgc cgagcgcctc ggtgatggcg aagccgaaaa
    18721 tcagattgcc gaattggccc tgcgcggcgg acggattgcg cagagcagcc gccaggtaat
    18781 tgccgaagat gatgccgacg ccgacgccgg cgccgcccat gccgatacag gcaatgccgg
    18841 ctccgatgta tttcgccgcg gtcgggtcca tgggaacgct cctttcaagg ccctcccgcc
    18901 cttccccgcg agcgggggag cgccgggagg gggccgtcag tggcccgggt gtatcgcatc
    18961 gttgagatag atgcaggtga gaatggcgaa gacgtaggct tgcaggaaag cgaccaggaa
    19021 ctcgagcgcc gtgagcatga tgacgagtat gagcggtaag gcggctccga gccagccaac
    19081 gacgccgaac ccggcgagca tgatgatgaa gccggcgaaa acctgaaggg tgatgtggcc
    19141 ggccaacata ttggcgaaca accgcacgct gtgggagacc ggacgcgaaa caaacgacag
    19201 cacctcgata accacgatgg ccggcaggat atagaccggc acgccgctcg gcacgaagag
    19261 cttgaggaat cgcaatccgt tcctccagaa gccgtagatg acgacgatga agaacaccag
    19321 cagcgcgagc gttgcggtga ttatcaactg gctcgtcacc gtgaaggaat atggaatcag
    19381 gccgatcatg ttggcgaaca ggacaaacat gaacagcgtg aacacgaacg gaaagaattt
    19441 catcccctcg gtgccggcag agctgcgcac cgtattggcc acgaattcgt atgacatctc
    19501 ggcgaccgac tgcagccggc ccgggacgac ggcacgcggc gccgtcgcgc cgatcagcag
    19561 cgccgaaacc aggacgacaa tgatcagcat gaacagcgcg gaattggtga aatagatctg
    19621 atatttgccg atcgtgatga tcggcacgat attgttgatc tgaaactggt ggatgggatc
    19681 gactgtcatg ggatcatcgc cgcacggcgc cgcgcctcaa ggtcacgcca aagctcactg
    19741 ttgccgactt gccgacgtat cgtttccttg ggttccgccg ggcatcaccc ccgcggagcg
    19801 catcacgttg aaaacgcccg cggcaaagcc gagcaagagg aatacaatga acccccaagg
    19861 cgagatgccg agcaaacgat cgatgagcca gccaagaccg gccccgacca gcacgccgcc
    19921 aacgagttcg ctggagagcc ggaagcccct ggcgtagcca gatgcagtcg tcgcccgatc
    19981 cacaccctcg tcatcggcag gctccgttgc accctcgcgt gcaagacctt cgccaagacg
    20041 ctggagtctc gcggagagag cggcctcatc ggttgctgcc ttcccgcgct cgccatcctt
    20101 gcgcgtgccg tcgctcatcg cctcgacacc cgcggcatgg ccgcaaacgc ggcggggccg
    20161 cccgctgaag ccgcgcggac catactgatt gggttccccc aagtcaagaa acggtcaccg
    20221 ttcctaatgc attgaaacaa cgatagatat ggacctgccg cgcaggcttg tcgaggcacg
    20281 attgtgcacc gcgaagccgt tgtccataga tggtcgtcca tggccctgtg cggcactccg
    20341 gcttcttaca ctgcagcttc ttatatgtcc ggcgaggaga cgcccatgat cgacaaggtc
    20401 cttgccactc tcattgcctg cctctgcctg gtggtgccgg tgctgcccgt ttgggctgac
    20461 gagggcacac ctgaaggcga agagggccgt tacacgttca gcaagatcgc ggacggcttc
    20521 attcggctcg acatgcagac cggcgaggtg tcgacctgca gccagcggac cgtcggttgg
    20581 gcctgtcagg cagtgccaga ggaccgcgcg gtgctcgaga aagagatcgg gcgtctgcgc
    20641 gccgagaacg ccctgctcaa gcgggatctc atctcgcgcg ggctacccct gccggccggg
    20701 acgatgcccg agccgcccgt cgtgcgcgag gatggccgcg ggctgcaccg aggaggctct
    20761 gatttcgacc gcatgatcgc cttcatgggc cgggtctggc agcggctggt cgaggcgatc
    20821 acccaggcgc aaaaacaagt gctgaacaaa agctagcgcc gggcgtgtcg tgaccggctt
    20881 gtcccccatc cacagcgcac ccgtagagca gattgcgac
//
LOCUS       DATMQB010000357         3281 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1093473, whole genome shotgun sequence.
ACCESSION   DATMQB010000357 DATMQB010000000
VERSION     DATMQB010000357.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3281)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3281)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3281
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1093473"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1052)
                     /locus_tag="VNY79_10235"
     CDS             complement(<1..1052)
                     /locus_tag="VNY79_10235"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018647022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HWX72869.1"
                     /translation="MSAVALLDAYRSRALSPLEAVRDVLQRVACFEPHIQATYLLAPE
                     RSLAQARASEERWRRGEPVGPLDGVPVTIKDNIATKGEPVPLGTAATELSPAAEDAPP
                     AARLREAGAIFFTKTTMPDYGMLSSGLSSFHPLTRNPWDLTRNPGGSSAGAGALAAAG
                     CGPLHLGTDIGGSVRLPAGWCGIFALKPSGGRVPIDPPYIGRVAGPMTRSVADAALMM
                     ATLAQPDARDFMSLPPQRLDWRVAPAKLSGLRIGVLLEAGCGYATAAPVRAAVERAGR
                     DFAAAGAVVEPLAPFLTQEMLDGLDRFWRTRALVDMRATPAERRKNILPFIRDWAESA
                     ANFSGEVVFQGFSQIMA"
     gene            1224..2558
                     /locus_tag="VNY79_10240"
     CDS             1224..2558
                     /locus_tag="VNY79_10240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HWX72870.1"
                     /translation="MQNLEARTIGKVSRRLIPFLIICYFVAYLDRVNVGFAALTMNKA
                     LGLTATMFGFGSGVFFLTYFIFEVPSNLFLDRFGARKWIARIMISWGILSGLMAAIPG
                     LARATGLGDETTFYVIRALLGVAEAGFFPGIIFYLTLWFPSVYRGRIIGSFMAAIPLS
                     SAIGSPISGLILGMNGVGGLDGWQWLFLIEAAPAIVLAFVTYFYLTDRPSDAHWLEPD
                     ERAWLTDRLAAERRQREAVHNLTLWEVMYNPRVWALAVVYFGLVACNYGVGFWLPQII
                     KAFGLSNAMTGWVTAIPYAVGAAFMVWYGYRSDSRGERKIHTAVALAIAAAGIAGSTL
                     TGNPTLTVIAFAIGACGVFGTLPVFWTLPTAVLSGTAAAAGIAVINSIGNLAGFAGPY
                     AMGWIKDTTGSFTGGLLLVAALAVVAMVIVLLLGHDHALEKAPGAAPALKEG"
     gene            2640..>3281
                     /locus_tag="VNY79_10245"
     CDS             2640..>3281
                     /locus_tag="VNY79_10245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase"
                     /protein_id="HWX72871.1"
                     /translation="MPAAVTLNAEQTLPADGSAGALAGRVWRPDAAGPSVAAVRAGGV
                     FDISAAFPTMRDLCETADPAASLRAASGERLGALEDILANTPPDERDPAKPWLLAPID
                     LQAIKAAGVTFAVSMIERVIEERARGNPQAAEGIRKDIVDIVGDDLQALRPGSREAAA
                     LKDALIARGMWSQYLEVGIGPDAEIFSKAQTMAAVGTGMDAGLHPLSNWNNPEP"
BASE COUNT          518 a         1137 c         1087 g          539 t
ORIGIN      
        1 gccatgatct ggctgaagcc ctgaaaaacc acttcgccgc tgaaattcgc cgccgattcc
       61 gcccagtcgc gaatgaacgg cagaatattc ttgcgccgtt ccgccggcgt cgcgcgcatg
      121 tcgaccagcg cgcgcgtgcg ccagaagcgg tcgagcccgt cgagcatttc ctgggtcaga
      181 aacggcgcga gcggttcgac gacggcgccc gcggcggcaa agtcgcgccc cgcccgctcg
      241 acggcggcgc gcaccggcgc cgcggtggcg taaccgcatc ccgcctcaag gaggacgcca
      301 atgcgcaggc cggagagctt cgccggtgcg acgcgccaat cgaggcgctg cggcggcagg
      361 ctcataaagt cccgcgcgtc cggctgcgcg agcgtcgcca tcatcagcgc cgcgtcggca
      421 acgctgcgcg tcatcggccc ggcgacgcgc ccgatgtagg gcggatcgat cggcacgcgc
      481 ccgccgctcg gcttgagcgc gaaaattcca caccagcccg ccggcaggcg caccgaaccg
      541 ccgatgtcgg tgccgagatg aagcggcccg cagccggccg ccgccagcgc tccggcgccg
      601 gcagaggagc cgccaggatt gcgcgtcaag tcccaaggat tgcgcgtcag cggatggaag
      661 ctggaaagcc ccgaggacag catgccgtag tccggcatcg tcgtcttggt gaagaagatg
      721 gcacccgctt cgcgcagccg cgcagccggc ggcgcgtcct ccgccgcagg cgaaagctcg
      781 gtcgcggccg tgcccagcgg gacgggctcg cccttggtcg ctatattgtc cttgatggtc
      841 accggcacgc cgtcgagcgg tccgaccggc tcaccccgcc gccagcgctc ctcggacgcg
      901 cgcgcctggg cgagcgaccg ctccggcgcc aggaggtagg tggcttgaat atgcggctcg
      961 aagcacgcga cgcgctgcag cacgtcgcgc accgcctcaa gcggcgacag cgcgcggctg
     1021 cgataggcgt cgagcagcgc gacggcgctc atgcggaatg gctgcatggc attaccaata
     1081 aggcggctgg cgccggtgaa caagcgaggc ccaggcccct catcgcttac cgtcttgtgc
     1141 tataacggcc gcgccggggg cgggaaaacc aagaaccaga tcgagtcagc gacgctcaat
     1201 cgcccgggga cgaaggagcg actatgcaga acttggaagc tcggacgatc gggaaggttt
     1261 ccaggcggct catccccttc ctgatcattt gctacttcgt cgcctatctc gaccgggtga
     1321 acgtcggctt cgcagcgctc accatgaaca aggcgctcgg cctgaccgcg accatgttcg
     1381 gcttcgggtc cggcgtgttc ttcctcacct atttcatctt cgaggtgccg tcgaatctgt
     1441 ttctcgaccg cttcggcgcg cgcaagtgga tcgcccgcat catgatcagc tggggtatcc
     1501 tctccggcct gatggcggcc atcccgggtc ttgcacgcgc caccggcctc ggcgacgaga
     1561 ccacgttcta cgtcatccgt gccttgctcg gcgtggcgga ggccggcttc ttccccggca
     1621 tcatcttcta tctgacgctg tggttcccct cggtctatcg cggtcgcatc atcggctcct
     1681 tcatggccgc cattccattg tcctcggcga tcgggtcgcc catttccggc ctgatcctcg
     1741 gcatgaacgg cgtcggcggc ctcgacggct ggcaatggct cttcctcatc gaggcggcgc
     1801 cggcgatcgt gcttgctttc gtcacctatt tctatctcac cgaccgtccg tccgatgcgc
     1861 attggctgga gccagatgaa cgcgcttggc tgaccgaccg cctcgccgcc gagcgccggc
     1921 agcgcgaggc ggtgcacaat ctcaccctct gggaggtcat gtacaatccg cgagtgtggg
     1981 cgctggcggt cgtctatttc gggctcgtgg cctgcaacta cggcgtcggc ttctggctgc
     2041 cgcagatcat caaggccttc ggattgtcga atgccatgac cggctgggtc accgccattc
     2101 cctatgcggt cggcgccgca ttcatggtct ggtacggcta tcgttccgac agccggggcg
     2161 aacgcaagat ccataccgcg gtcgcgctgg cgatagcggc cgcgggcatc gcgggctcga
     2221 cgctgaccgg caacccgacg ctgacggtca ttgccttcgc catcggcgcc tgcggcgtat
     2281 tcgggacgct gccggtattc tggacactgc cgaccgccgt cttgtccggc acagcagccg
     2341 ccgccggcat cgcagtgatc aattcgatcg gcaacctcgc cggcttcgcc gggccctatg
     2401 ccatgggctg gatcaaggat acgaccggca gcttcaccgg cgggctgctg ctggtcgctg
     2461 cactagccgt cgtggccatg gtcatcgtgc tcctgctcgg ccacgatcac gcgctcgaga
     2521 aagcgcccgg agcggctccc gcgctgaagg aaggatgacg ccacggcccg ttgcagcacc
     2581 ttcaggtggc tggtgattga tatggtgagc agcgccacga cggcgccggg atggcactca
     2641 tgcctgcagc agtgacgttg aacgccgaac agacgctgcc ggccgatgga tctgccggcg
     2701 cgctcgccgg ccgcgtctgg cggcccgacg cagcgggccc ttcggtcgcc gccgtgcgcg
     2761 ccggcggggt gttcgacatc agcgctgcgt tcccgaccat gcgcgacctc tgcgagacgg
     2821 ccgaccccgc ggcgagcttg cgggcggcgt cgggcgaacg gctcggcgcg ctcgaagaca
     2881 ttctcgccaa cacgccgccc gatgaacgcg accccgcgaa gccatggctg ctcgctccca
     2941 tcgacctcca ggcgatcaag gcggcgggcg tgaccttcgc cgtctcgatg atcgagcggg
     3001 tgatcgagga gcgcgctcgc ggcaatccgc aagcagcgga aggaatccgc aaggacatcg
     3061 tagacatcgt cggcgacgac cttcaggcgc tgcggcccgg ctcgcgcgag gcggccgcgc
     3121 tcaaggacgc gctgatcgcg cgcggcatgt ggagccagta tctcgaagtc ggcatcggac
     3181 cggacgccga aatcttctcg aaggcgcaga cgatggccgc ggtcgggacc ggcatggatg
     3241 cgggactgca tccgctgtcg aactggaaca atcccgagcc g
//
LOCUS       DATMQB010000358         5698 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1093510, whole genome shotgun sequence.
ACCESSION   DATMQB010000358 DATMQB010000000
VERSION     DATMQB010000358.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5698)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5698)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5698
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1093510"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(467..640)
                     /locus_tag="VNY79_10250"
     CDS             complement(467..640)
                     /locus_tag="VNY79_10250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72872.1"
                     /translation="MSDAGHSGPQPAAPPTAADAHALAQVEKWMAVIRELRGTPRGGW
                     PDENDAPMARDDG"
     gene            complement(665..1243)
                     /locus_tag="VNY79_10255"
     CDS             complement(665..1243)
                     /locus_tag="VNY79_10255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Smr/MutS family protein"
                     /protein_id="HWX72873.1"
                     /translation="MSRRRQLSEDERALWTGFARSIRPLHGRQAPAEPPVPASNEAAD
                     TANDETAPPDQPPAPAARLDPPPQKASAPLVPLGRRLRQRVARGRESIDARIDLHGMT
                     QSRAHAALLRFLRQAQADDVRIALVVTGKGAARADGHHGGERGVLKRQVPLWLALPEF
                     RSLVVGFEDAHIGHGGQGALYVRLRRAQRTDR"
     gene            complement(1240..2601)
                     /locus_tag="VNY79_10260"
     CDS             complement(1240..2601)
                     /locus_tag="VNY79_10260"
                     /inference="COORDINATES: protein motif:HMM:NF015523.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004553 - hydrolase activity, hydrolyzing
                     O-glycosyl compounds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MltA domain-containing protein"
                     /protein_id="HWX72874.1"
                     /translation="MAARRSFLHLALLLIGLAGVTAARSAEREPIKFPDAQYEPVDWS
                     KLDGWANDDHAAAFAAFLTSCRALNGERRPGRETAITEELKNVCQRAFAAIPLEEDGA
                     RKFFEDNFRPLRISKLGDSDGFLTGYYEPIIEGSRVPTGEFTAPLFRRPPNLVASGRR
                     KLGDLFPNKGVKVGRRFGRRKIVPFYTRGEIEDGALDGWRLEICWLRSQLDVLFAQIQ
                     GSARIRLEDGTILRINYDSHNGWPYTPVGRVLIERNIIPKDEMSMQRIREWMEAHPDD
                     AKDARRQNKSYVFFRIVDLASEDEPMGAQGVPLVPGRSIAVDRALHVYGTPFFISADL
                     PIANEKTATKFRRLVFAQDTGSAIVGPARADIYFGAGAEAARIAGRIRNPGAFAMLLP
                     RALDPALTARDQPLPRQRPATFAQLDFGAMADPTVDEVPLPQPKPAAAVGPAPKPKAR
                     RMP"
     gene            complement(2608..3315)
                     /locus_tag="VNY79_10265"
     CDS             complement(2608..3315)
                     /locus_tag="VNY79_10265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Tim44/TimA family putative adaptor protein"
                     /protein_id="HWX72875.1"
                     /translation="MFDIYTIIFLALAVFIFLRLRSVLGQRTGRERPPYDPYSTRDAV
                     RSPANDKVVTLPPRPPEAATRQAEPAPPPADRWKGVAESGSSIAAGLDAVIAVDPTFD
                     AGHFITGARTAYEMIVTAFAEGDRRQLRSLLSREVYEGFDTVIGERESRGETAETRFV
                     SIDASKITGAEVRGRAAQIIVRFVSKLISVTRDSSGAVIEGNAEKVTDVTDVWTFARD
                     VSSRDPNWKVVATEAGQ"
     gene            3645..4133
                     /gene="secB"
                     /locus_tag="VNY79_10270"
     CDS             3645..4133
                     /gene="secB"
                     /locus_tag="VNY79_10270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051082 - unfolded protein binding
                     [Evidence IEA];
                     GO_process: GO:0015031 - protein transport [Evidence IEA];
                     GO_process: GO:0051262 - protein tetramerization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="protein-export chaperone SecB"
                     /protein_id="HWX72876.1"
                     /translation="MAATNGPQPQAVMPQIGVLAQYVKDLSFENPNAPRSLTPTGQQP
                     TLNVQVHVDAKPASETDVEVSLRLEGKAESQGTLLFSFELIFGGIFRVQNVPADSMQA
                     VVLIECPRLLFPFAREIIATAVRNGGFPPLLLDPIDFVALYRQRMAQAQASPPSQPLT
                     PG"
     gene            complement(4120..4815)
                     /gene="dnaQ"
                     /locus_tag="VNY79_10275"
     CDS             complement(4120..4815)
                     /gene="dnaQ"
                     /locus_tag="VNY79_10275"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit epsilon"
                     /protein_id="HWX72877.1"
                     /translation="MREIVLDTETTGLDPFAGHRVVEIGCVELINGIPSGQTFHRYLN
                     PERSMPPEALAVHGLDDQFLKDKAFFAEVVDDLIAFLSDAPLIIHNAAFDIAFLNAEL
                     ERTGRPLIARERMVDTLLIARRKHPGASNRLDDLCARYAIDSSRRTKHGALLDAELLA
                     EVYVELIGARQATLILSQSVLPGRGHGEPIIVRERPMPLPPRVTAEERAAHRHFIATL
                     GDKPIWLDYVSLG"
     gene            complement(4888..5505)
                     /gene="coaE"
                     /locus_tag="VNY79_10280"
     CDS             complement(4888..5505)
                     /gene="coaE"
                     /locus_tag="VNY79_10280"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490797.1"
                     /note="Dephospho-CoA kinase (CoaE) performs the final step
                     in coenzyme A biosynthesis; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004140 - dephospho-CoA kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HWX72878.1"
                     /translation="MSHRPFVLCLTGSLGMGKSTAAKFFAEAGVPVHDSDAVVHALYE
                     GEAVPLIERAFPGSTDGGKVDRGKLATMVLGNDAALGRLQAIVHPLVAAARDAFLAEA
                     QARNAPVVVLDVPLLFETGGERRCDAVVVVSAPAELQRQRVLGRPGMTEDKFAALLAK
                     QMPDAEKRRRADFIVDSSQELNDARAQVRDILLLVHKMREGDGDS"
     gene            complement(5502..>5698)
                     /locus_tag="VNY79_10285"
     CDS             complement(5502..>5698)
                     /locus_tag="VNY79_10285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003609226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="Maf family protein"
                     /protein_id="HWX72879.1"
                     /translation="FSERFLDLYLDAVGSAATASVGAYQIEGLGIQLFERIDGDYFTI
                     LGLPLLPALDFLRRRGCLVA"
BASE COUNT          971 a         1846 c         1941 g          940 t
ORIGIN      
        1 agccagggga tgccgtagac gatgggcacc agaaaatggc catgcgccag aacatcccgc
       61 gcgatttcag cgttggtgcc ttcctcccag atgaacgaat gcagagtaag attgggtaat
      121 acggcacagg cccaaacaag aaggacaata atgggcaccg ctcgcggacg gcgaagagac
      181 ccctctaata actctgctcc cttacctgct gcgtgcccaa gaacagagta aaccatgcgg
      241 cgcccgtttt tgcgccatcg taacatgctc cagcacggcg ttccaaagtg aacagtcgta
      301 accgatcgcg ttgtgttgga ctgctgcggg aggatttgac aacacaacgg agggatgtcg
      361 cttgttggcg cttggccgac gtgctgcgat gtccgcaccc atgtcggctt tccagggata
      421 gggcatcccg agttgtgggc acaccgccta gtgataagat ttgctgctag ccgtcgtcgc
      481 gcgccattgg cgcgtcgttc tcatcgggcc agccgccgcg cggcgtgccg cggagttcgc
      541 ggatcaccgc catccatttc tcgacctggg cgagagcgtg cgcatctgcc gccgtaggcg
      601 gcgctgcggg ttgcggtcca gagtggccag cgtcggacat cagcccgaca ttccgccggc
      661 atcgttaacg atccgttctt tgggctcgcc gcaggcgcac atagagcgcg ccctgcccgc
      721 cgtgcccgat atgggcgtcc tcgaagccga cgaccaagga acggaattcc ggcagcgcca
      781 gccacagcgg cacctgccgc ttgagcacgc cgcgctcgcc gccgtggtga ccgtcggccc
      841 gggctgctcc cttgccggtg acgacgagcg cgatccgcac gtcgtcggct tgggcctgcc
      901 gcaggaagcg cagcaatgcc gcgtgggctc tgctctgcgt catgccatgc agatcgatcc
      961 gcgcatcgat cgattcgcgg ccgcgggcca cacgctgccg caatcgccgg ccgagcggaa
     1021 cgagtggagc ggaagctttt tgcggcggcg ggtccagccg cgccgccggc gcgggaggct
     1081 gatcgggcgg cgcagtttca tcgttcgcgg tgtccgcagc ttcgttgctg gcggggaccg
     1141 gcggttcggc gggtgcctgc cgcccgtgga gcggcctgat cgatcgcgca aaaccggtcc
     1201 acagcgcgcg ctcgtcctcg ctcaattggc ggcgccggct catggcatgc gccgcgcttt
     1261 cggcttcggc gccggaccca ccgcagcggc cggcttcggc tgcggcagcg gcacctcgtc
     1321 caccgtggga tcggccatgg cgccgaagtc gagctgcgca aaggtggcag gacgctgccg
     1381 cggcagcggt tgatcgcgtg ccgtcaacgc cggatcgagc gcgcgcggca ggagcatcgc
     1441 gaaggcgccg ggattgcgga tgcggccggc gatgcgcgcc gcctcggcgc cggcgccgaa
     1501 atagatgtcg gcgcgcgccg gaccgacgat cgccgagccg gtatcctggg cgaagacgag
     1561 acggcgaaat ttcgtcgccg ttttttcatt ggcgatcggc agatcggcgc tgatgaagaa
     1621 cggcgtgccg tacacgtgca gcgcacgatc caccgcgatc gagcggccgg gcaccagcgg
     1681 cacgccctgc gcgcccatcg gctcgtcttc gctggcgaga tcgacgatgc ggaagaagac
     1741 atacgatttg ttctgccgcc gcgcgtcctt ggcatcgtcc ggatgcgcct ccatccattc
     1801 gcggatgcgc tgcatcgaca tctcgtcctt ggggatgatg ttgcgctcga tcagcacgcg
     1861 gccgaccggc gtatacggcc agccgttgtg cgaatcgtag ttgatgcgaa gaatggtacc
     1921 gtcctccagg cggatgcgcg ccgagccctg gatctgcgcg aacagcacgt cgagctggct
     1981 gcgcaaccag cagatctcca gacgccagcc gtccagcgcg ccgtcctcga tctcgccgcg
     2041 cgtatagaag gggacgatct tgcgccggcc gaaccggcgg ccgaccttca cgcccttgtt
     2101 gggaaagaga tcgccgagct tgcgccggcc ggacgccacg agattgggcg gccggcgaaa
     2161 cagcggggcg gtgaactcgc cggtcggcac gcgcgagcct tcgatgatcg gctcataata
     2221 gcctgtgagg aagccgtcgc tgtcgccgag cttgctgatg cgcagcggcc ggaaattgtc
     2281 ctcgaagaac ttgcgcgcac cgtcctcctc gagcgggatg gccgcgaacg cccgctggca
     2341 gacgtttttg agttcctcgg tgatcgccgt ctcgcggccg ggccgccgct cgccgttcaa
     2401 cgcccggcag ctcgtgagaa aagccgcgaa agcggcggcg tggtcatcat tcgcccagcc
     2461 gtcgagcttc gaccagtcga ccggctcgta ctgagcgtcg ggaaatttga tcggctcgcg
     2521 ctcggcgctg cgggccgccg tcacgccggc gagaccgatc agcaataggg caaggtgcag
     2581 gaaggaacga cgcgccgcca ttgcccctca ttgcccggct tcggtcgcga caaccttcca
     2641 gttcggatcg cgcgaagaca cgtcgcgcgc gaacgtccac acgtcggtga cgtcggtgac
     2701 cttttcggcg ttgccttcga tcaccgcgcc ggagctgtcg cgcgtcaccg agatgagctt
     2761 ggagacgaag cggacgatga tctgcgccgc gcggccgcgc acctcggcgc cggtgatctt
     2821 cgaagcatcg atcgagacaa agcgggtctc ggcggtctcg ccgcgggatt cgcgttcgcc
     2881 gatcacggtg tcaaaacctt cgtagacctc gcgcgagagc aggctgcgca actggcggcg
     2941 gtcgccttcg gcaaaggcgg tcacgatcat ctcgtaagcg gtgcgcgcgc cggtaatgaa
     3001 atgcccggcg tcgaaggttg gatcgacggc gatgaccgca tcgaggccgg cggcgatgct
     3061 cgagccgctt tcggcgacgc ccttccagcg gtccgccggc ggcggcgccg gctcggcttg
     3121 ccgcgttgcc gcttccggcg gacgcggcgg cagggtcacg actttgtcat ttgccgggct
     3181 gcgcacggca tcgcgtgtcg aatacggatc atagggcggc cgctcgcggc cggtgcgctg
     3241 tcccaacacg ctgcgaagcc gcaggaaaat gaacaccgcg agcgccagga agatgatggt
     3301 atagatgtcg aacacgtttc acgttctttc ggcggcgcga agtgcggatc ggcgcatccc
     3361 agcggcggtt cgcagcgacg aatccacggg aaagtccggt tcccgctcta tgtaggcacg
     3421 cacggggcgc catccagagg gtcgccgcgc gacggccatg ccactgagag tttaaacgat
     3481 ccgagccgcc gcgccaacgt tggaagagca aaatggcttg atcgtccagg ccggcggccc
     3541 agccgctgcg ccgtgcggtc atgcagcggc atcagccggc agcattgttc gcctgctatg
     3601 cctgtgttag ccaagcctta acgagggtcg ggccggaggc gagcatggca gcgacgaacg
     3661 gtccacagcc gcaggcggtg atgccgcaga ttggcgtgct cgcgcagtac gtgaaggacc
     3721 tttcgttcga aaatcccaac gcgccccgtt cgctgacgcc tacggggcag cagccgacgc
     3781 ttaacgtcca agtccacgtc gacgccaagc ccgcgagcga gaccgacgtc gaggtttcgc
     3841 tgcggctgga aggcaaggcg gagtcgcagg gaacgctgct gttcagcttc gagctcattt
     3901 ttggcggcat ctttcgcgtc cagaacgtgc cggcggacag catgcaggcg gtcgtgctga
     3961 tcgagtgccc gcgtcttctc tttccatttg cgcgcgagat catcgcgacg gcggtgcgca
     4021 acggcggctt cccgccgctc ctgctcgatc cgatcgattt cgtggctctc taccgccagc
     4081 ggatggcgca ggcgcaggct tcaccgccgt cgcagccgct caccccaggc tgacgtaatc
     4141 gagccagatc ggcttgtcgc cgagagtggc gatgaagtgc cggtgcgcgg cgcgctcctc
     4201 ggcggtcaca cgcggaggaa gcggcatggg tcgttcgcgc acgataatgg gttcgccgtg
     4261 cccccggccg ggcaagaccg actgcgacag gatgagcgtc gcctggcgcg cgccgatcag
     4321 ctccacatag acttcggcga gcagctcggc gtcgagcagc gctccgtgct tggtacggcg
     4381 tgagctgtcg atggcgtaac gcgcgcagag atcgtcgagg cggtttgacg cgccgggatg
     4441 cttgcggcgc gcaatgagca gcgtatcgac catgcgctcg cgggcgatca gcggccgccc
     4501 agtgcgctcg agctcggcat tgaggaaggc gatgtcgaaa gcggcattgt ggatgatcag
     4561 aggcgcgtcg ctgaggaagg cgatcaagtc gtccacgact tcggcaaaga aagccttgtc
     4621 cttgaggaac tgatcatcga ggccgtgaac cgcaagcgct tccggcggca tgctgcgctc
     4681 ggggttgaga tagcggtgga acgtctggcc cgaggggatg ccgttgatga gctcgacgca
     4741 gccgatttcg accacgcggt gcccggcaaa cggatcaagg ccggtggttt cggtatcgag
     4801 cacgatctcg cgcatgccaa ccttgagagg tggtccgttt ggcccgccag cccggccaat
     4861 gtgccggcgg agagctgcgg caattcctta cgaatcaccg tcgccctcgc gcattttatg
     4921 cacaagcagc agaatgtcgc gtacctgcgc gcgggcatcg ttgagctcct gcgagctatc
     4981 cacgataaag tcggcgcgcc ggcgtttctc ggcatctggc atctgcttgg cgagaagcgc
     5041 ggcgaacttg tcctcggtca tccccgggcg gccgaggacg cgctggcgtt gcagctcggc
     5101 cggcgccgac accacgacga cggcgtcgca gcgccgctcg cctccggtct cgaacaggag
     5161 cggcacgtcg aggacgacga cgggtgcgtt gcgggcctgc gcctcggcga ggaacgcgtc
     5221 ccgcgccgcc gcgaccagcg gatgcacgat ggcctggagc cggccgagcg cggcgtcatt
     5281 cccgagcacc atcgtggcga gcttgccgcg atcgacctta ccgccatcgg tcgacccggg
     5341 gaacgcgcgc tcgatcaacg ggactgcttc gccctcatag agcgcatgca ccacggcgtc
     5401 ggaatcgtgg accggaaccc ccgcctcggc aaagaacttt gccgccgtcg atttgcccat
     5461 gccgagggag ccggtcaggc acaggacgaa ggggcgatgg ctcatgcgac caggcatccg
     5521 cgccgccgca gaaaatccag cgccggaagg agcggcagac cgaggatggt aaaatagtcg
     5581 ccgtcgatcc gctcgaacag ctggatgccg aggccctcga tctgataggc gccgacgctt
     5641 gcggtcgccg cgctgccgac ggcgtcgaga tagaggtcga ggaaccgctc cgaaaacg
//
LOCUS       DATMQB010000359         2689 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3871371, whole genome shotgun sequence.
ACCESSION   DATMQB010000359 DATMQB010000000
VERSION     DATMQB010000359.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2689)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2689)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2689
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3871371"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..890)
                     /locus_tag="VNY79_10290"
     CDS             complement(<1..890)
                     /locus_tag="VNY79_10290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018454087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050080 - malonyl-CoA decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malonyl-CoA decarboxylase family protein"
                     /protein_id="HWX72880.1"
                     /translation="MNTSFFSEMLQSIADRSRALILRERREPSHERSAGLIELSEELL
                     SGRGEASGVALANEILDEYADLTIGPRIAFFEAMATTFGHDRARIDEAVAAWRADPSA
                     KAAAALHRAAEPRRLELLRRLNLAPGGTAALVRMREQFLDAMNRRDDLRVVDGDFIHL
                     FSSWFNRGFLVLRRIDWSTPALILEKIIRYEAVHQIRDWEDLRRRIDLPDRRCYAFFH
                     PALIDDPLIFVEVALTREIPGAIAPILSDKREAVAPERATTAVFYSITNCQRGLAGVS
                     FGNFLIKQVVEEVSREMPRIA"
     gene            1038..2210
                     /locus_tag="VNY79_10295"
     CDS             1038..2210
                     /locus_tag="VNY79_10295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014331831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CaiB/BaiF CoA-transferase family protein"
                     /protein_id="HWX72881.1"
                     /translation="MPGPLAGLRVLELARILAGPWAGQILADLGADVIKVERKGVGDD
                     TRAWGPPFVAGADGGHLDAAYFHGTNRGKRSIELDFDSEEGRRIVKKLAARSDVVLEN
                     FKVGSLAKFGLDYANLARDNPRLIYCSVTGFGQTGPYAARAGYDLMAQGMGGFMDLTG
                     HPDGEPLRSGVPISDIFTGVYSAVGILAALARREKTGRGGYVDTALVDSTVGVLANQA
                     LNYLVSGKVPRRMGNAHPNITPYQIFPVADGHIIIASGNDNQFAKLCAVLGAPDLAKE
                     PAYKDNKARLANRTELVARICALTARMSRNELLTKLEAAGVPAGPINDLDQVFSDPQV
                     IHRGMRLELPSANAEGGKIPGVRTPIVLDGAPMAAERPSPRLGEHTAEILREIGEV"
     gene            2297..>2689
                     /locus_tag="VNY79_10300"
     CDS             2297..>2689
                     /locus_tag="VNY79_10300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007800641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HWX72882.1"
                     /translation="MIDWYRELNTAERRSFWACFGGWALDALDVQIYTFVVPALIALW
                     HITNAQAGLLATSALVVSAFGGWIAGMLADRVGRARLLMITIAWFAFFTFLSGFTQNF
                     EQLLIVRGLQGLGFGGEWAAGSVLIGEVI"
BASE COUNT          453 a          909 c          877 g          450 t
ORIGIN      
        1 gcgatgcgcg gcatctcgcg cgagacttct tccaccacct gcttgatcag gaaattgccg
       61 aagctcacac cggcaagccc gcgctggcaa ttggtgatcg aatagaagac cgccgtcgtc
      121 gcccgctccg gcgccaccgc ctcgcgcttg tcggacagta tcggcgcgat cgccccggga
      181 atttcccgtg tcagcgccac ctcgacgaag atcagcgggt cgtcgatcag cgccggatgg
      241 aagaaggcgt agcagcggcg gtcgggcagg tcgatgcgcc ggcgcaaatc ttcccagtcg
      301 cggatctgat gcacggcctc gtagcggatg atcttttcca ggatcaaggc cggcgtcgac
      361 cagtcgatcc ggcgcagcac caggaagccg cggttgaacc aggaggaaaa cagatggatg
      421 aagtcgccgt cgaccacgcg caggtcgtcg cggcgattca tggcgtcgag gaactgctca
      481 cgcatgcgca ccagcgctgc tgtgccgccg ggcgcgagat tgagccggcg caggagctcc
      541 agccggcgcg gctcggcggc gcgatgcaat gcggccgcgg ccttcgccga cggatcagcg
      601 cgccaggctg caaccgcttc gtcgatgcgc gcgcgatcgt ggccgaacgt ggtcgccatc
      661 gcctcgaaga aagcgatgcg cggtccgatc gtcaggtcgg cgtattcgtc gagaatctcg
      721 ttggcgagcg ccacgcccga ggcctccccg cgacccgaca gcaattcctc gctgagctcg
      781 atgaggccgg cggagcgctc gtgcgacggc tcgcggcgct cgcgcaggat cagggcgcgg
      841 ctgcgatccg cgatgctttg cagcatttcg ctgaaaaacg aggtgttcac cgcaattcca
      901 aaccgctcgg cggaagtgaa ctaatgattg ccccaaagga tggcaagccg gcaaaacggg
      961 gccccgtaga caaatcccga cggctgggtc acttaagagc ccctttgtca tagagcgcct
     1021 ttgtaaagga gctgttcatg ccaggtccgc tggccggtct gcgcgtgctc gagcttgccc
     1081 gtattctggc gggtccgtgg gccgggcaaa tcctcgccga tctcggtgcc gacgtgatca
     1141 aggtcgaacg caagggcgtc ggcgacgata cccgggcctg ggggccgcct ttcgtggccg
     1201 gcgccgacgg cggtcatctc gacgccgcct acttccacgg cactaatcgc ggcaagcggt
     1261 cgatcgagct cgatttcgac agcgaagagg ggcggcgcat cgtcaagaag cttgccgccc
     1321 gctccgacgt ggtgctggaa aacttcaagg tcggctcgct cgccaagttc ggcctcgact
     1381 acgcgaacct cgcgcgcgac aacccgcgcc tgatctactg ctcggtcacc ggcttcggcc
     1441 agaccggccc ctatgcggcg cgtgccggct atgacctcat ggcgcagggc atgggcggct
     1501 tcatggacct gaccggccat cccgacggcg agccgctgcg ctccggcgta cccatctccg
     1561 acatcttcac cggcgtctat tcggcggtcg gtattctggc ggcgctggca cggcgggaaa
     1621 agaccgggcg cggcggctat gtcgataccg cacttgtcga ttcgaccgtc ggcgtcctcg
     1681 ccaaccaggc gctcaactat ctcgtctccg gcaaagtccc acgccgcatg ggcaatgccc
     1741 acccaaacat cacgccctac cagatcttcc cggtggccga cggccacatc atcatcgcca
     1801 gcggcaacga caaccagttc gccaagctgt gcgccgttct cggcgcgccg gatctcgcca
     1861 aggagccggc ctacaaggac aacaaggcgc ggctcgcgaa ccgcaccgag cttgtcgcgc
     1921 gcatctgcgc gctcaccgcg cgcatgtcgc ggaacgagct gctgaccaag cttgaagccg
     1981 caggcgtgcc ggccggcccg atcaacgatc tcgatcaggt gttttccgat ccgcaggtga
     2041 tccaccgcgg catgcggctc gagctgccga gcgcgaacgc cgagggcgga aaaattcccg
     2101 gcgtgcgtac gccgatcgtg ctcgacgggg ccccgatggc ggcggagagg ccgtcgccgc
     2161 ggctcggcga gcacaccgcc gaaattctgc gcgagatcgg cgaagtctga cgcccgacgg
     2221 cggcgcgggc cgccgcaggc tgtggactaa aaccgcgcgg aatttcgcgc ggacgcattc
     2281 cgcgctacgc tctcgcatga tcgattggta tcgcgagctg aacaccgccg agcggcgcag
     2341 cttctgggcc tgcttcggcg gctgggcgct cgacgcgctc gacgtgcaga tctacacctt
     2401 cgtcgtgccg gcgctgatcg cgctttggca tatcaccaac gcccaggccg gactgctggc
     2461 gacgagcgct ctcgttgttt ccgcgttcgg cggctggatc gccggcatgc tcgccgatcg
     2521 cgtcggccgc gcccggctcc tgatgatcac gatcgcctgg ttcgcgttct tcacgttcct
     2581 ctccggattc acccagaatt tcgagcagct ccttatcgtg cgcggcttgc aggggctcgg
     2641 cttcggcggc gaatgggcgg ccggttcggt gctgatcggc gaagtgatc
//
LOCUS       DATMQB010000360        14254 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3257342, whole genome shotgun sequence.
ACCESSION   DATMQB010000360 DATMQB010000000
VERSION     DATMQB010000360.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 14254)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14254)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14254
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3257342"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..129)
                     /locus_tag="VNY79_10305"
     CDS             complement(<1..129)
                     /locus_tag="VNY79_10305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_076612205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IS5/IS1182 family transposase"
                     /protein_id="HWX72883.1"
                     /translation="MWKPEHRRAAERRGLRYPSDLTDAEWALVEPMIPPAKRGGRRR"
     gene            complement(712..1596)
                     /locus_tag="VNY79_10310"
     CDS             complement(712..1596)
                     /locus_tag="VNY79_10310"
                     /inference="COORDINATES: protein motif:HMM:NF024242.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_function: GO:0043565 - sequence-specific DNA binding
                     [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HWX72884.1"
                     /translation="MATALPLFHLYGDPPDDQAFDFIHVETIASRSSIHDWTIRAHRH
                     RNLFQILLIEQGGGEMTFEAARLPFAAPAAILVPAAVAHGFRFQPNLTRGWVLSFTED
                     AAGLLADRAGEALSRLRALAVQPIVPIAEDAERSRLSALCAELFEESSLAREGYRLAM
                     RGLLALIAIGVARLAASRARTGSVTLQPADATVARLRALVDESFRRERQLGFYAEQLG
                     MTVDRLNDHVKRATGVTAGHLVRQRVLSEAKRQLVFTAQPIQDIANELAFSDPSHFAR
                     FFRKHTGTTPHEFRDQGG"
     gene            complement(1719..1943)
                     /locus_tag="VNY79_10315"
     CDS             complement(1719..1943)
                     /locus_tag="VNY79_10315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72885.1"
                     /translation="MSNEQQNNPRRDQQQQGNPQQGNPQQGGQKPQHQQGGQKPGQQQ
                     QGGEQRKPGEQQSGQNKPGQGGQHGGGMDR"
     gene            2159..3073
                     /locus_tag="VNY79_10320"
     CDS             2159..3073
                     /locus_tag="VNY79_10320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663086.1"
                     /note="LivHMGF is the membrane component of the LIV-I/LS
                     branched-chain amino acid transporter; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease LivH"
                     /protein_id="HWX72886.1"
                     /translation="MEYFVQQLINGITLGSIYGLIAIGYTMVYGIIGMINFAHGDIFM
                     VGAFIALITFLVLVAIGITAVPLALLIVLIVAMALTALYGWTVERIAYRPLRHSFRLA
                     PLISAIGISIVLQNYVQVAQGARVKPLPPLIHGGYTLFEGNDFAVRLSNIQVIVVVTT
                     LFLMVGFSFLVARTRLGRNMRACEQDLKMAALLGIDVDRTISLTFVIGAALAAVAGLM
                     FLLYYGVVDFFIGFLAGVKAFTAAVLGGIGSLPGAMLGGILIGLIETMWSAYFSIEYK
                     DVAAFGVLIVVLIFLPTGILGRPEVEKV"
     gene            3088..4413
                     /gene="livM"
                     /locus_tag="VNY79_10325"
     CDS             3088..4413
                     /gene="livM"
                     /locus_tag="VNY79_10325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007065662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="high-affinity branched-chain amino acid ABC
                     transporter permease LivM"
                     /protein_id="HWX72887.1"
                     /translation="MLRDNEPSKPPAFVAAAKEAALSALVAFGLFVTLIGVRTDQGPT
                     GALVIATRFGPLAAIVAAVFVAAFIRALVFRDATVISLGRLVPPRVTAVVSGLAGYAA
                     IAFLVVALVVPVLAYTNRYYLDLAILIATYTMLGFGLNIVVGLAGLLDLGYVAFYAVG
                     AYSYALIAQNFGLSFWICLPLAGILAAFAGLLLGFPVLRLRGDYLAIVTLGFGEIIRL
                     ILLNWQDLTGGPNGISGIPRPSFFGLPFTAGENGFAATFGLKYSATHRVVFLYYLILA
                     LALATNWFTLRLRRLPIGRAWEALREDEIACRALGVNTTTTKLTAFALGAMFGGFAGA
                     FFATRQGFISPESFAFGESALVLAIVVLGGMGSQLGVAVAATVMLGGFELFREFAQYR
                     MLVFGAAMVAIVIYRPRGLVSTRTPSVFLTEGKVIPAAIVQAARTETPA"
     gene            4410..5246
                     /locus_tag="VNY79_10330"
     CDS             4410..5246
                     /locus_tag="VNY79_10330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018897086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX72888.1"
                     /translation="MSPTQILVVEHLTMSFGGLVAVSDLSFDARRREITALIGPNGAG
                     KTTLFNCITGFYRPTVGRLQLAHPDGASFMLERMPEFRIAREARVARTFQNVRLFPGM
                     TLLENLLVAQHQALMLASGFTVLGLFGSRRYARAEANAIDKARYWLDRVGLAARADDA
                     AGTLPYGAQRRLEIVRALCTDPVLLCLDEPAAGLNNNESAELNKFLRAVREEHGTSIL
                     LIEHDMGVVMEISDRIVVLDHGLKIAEGTPEEVRHDPKVIAAYLGVADAELDHVDAEV
                     AP"
     gene            5288..5995
                     /locus_tag="VNY79_10335"
     CDS             5288..5995
                     /locus_tag="VNY79_10335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX72889.1"
                     /translation="MLRGVKTYYGNVIALKGVDVDVHEGEIVALIGANGAGKSTLMMT
                     VFGNPRASEGEIRFAGRDITAMATHEIAKLRIAQSPEGRRIFARMTVLENLQIGATVS
                     GGGDFEGDLERVFTLFPRLRDRVRQRGGTLSGGEQQMLAIGRALMGRPRLILLDEPSL
                     GLAPLLVQQIFAAIRALNERDRLTVFLVEQNAYHALKLAHRGYVMVNGEITLTGNGRE
                     LLQRPEIRAAYLEGQTR"
     gene            6007..6372
                     /locus_tag="VNY79_10340"
     CDS             6007..6372
                     /locus_tag="VNY79_10340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72890.1"
                     /translation="MAELYAGESIGAIVLVTGFLGGGAAWLSGRAIAGAWHPPWHVAL
                     VALLLGAAARFIHFALFHGELLSAPSYACDTLILFIVGLLAWRATRASQMVRQYPWLY
                     TRAGPLQWRKVGREDLPRQ"
     gene            6430..7548
                     /locus_tag="VNY79_10345"
     CDS             6430..7548
                     /locus_tag="VNY79_10345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015658 - branched-chain amino acid
                     transmembrane transporter activity [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     substrate-binding protein"
                     /protein_id="HWX72891.1"
                     /translation="MNKLRLCALAFLFGLFAAPAMAQDITVAVAGPMTSGQATFGRQM
                     KNGADQAIADINAAGGVLGRKLKLEVGDDACDPKQARSVAEKLVGKQVAAVVGHYCSS
                     SSIPASDAYLDGGVLQITPASTNPLLTDRGMWNTFRTCGRDDQQGGFAAGYLAKHFRD
                     KKIAIINDKTTYGKGLADEVKKALNAAGVKEKLYESYNMGDKDFTALVSKLKLNGIDI
                     VYDGGYHQEAGLIVRQMRDQGLKTMLMSGDAMADREFASITGPAAEGVLFTFGPDPRR
                     RTTAAAIVKKFKDKGIDPEGYTLYTYAAFQVWAAAATKAGTLDPQKVAAAMHSGTWDT
                     VLGPLSFNKKGDITAIGWAVYRWDKNGNYDEITEESRT"
     gene            complement(7788..8519)
                     /locus_tag="VNY79_10350"
     CDS             complement(7788..8519)
                     /locus_tag="VNY79_10350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008138502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HWX72892.1"
                     /translation="MPHVTIAAALVAGMLSFLSPCVLPLVPPYLVYLTGTSLERFADA
                     EAEPRVRRETLLAAFLFVLGFSTVFVALGAGASAIGAVLRAYSGELAIAAGIIIVVMG
                     LHFLGLAPIGLLMRQKRLEVAKPVGLWGAYLMGLAFAFGWTPCIGPILAAILAVAASE
                     ETVAKGAGMLAVYSLGLGVPFIAAAFAVEPFAAFLARFRAHLGLVEKAMGGLLVLTGI
                     AFLTGAVTQASFWLMETFPVLGKIG"
     gene            8746..9735
                     /locus_tag="VNY79_10355"
     CDS             8746..9735
                     /locus_tag="VNY79_10355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P1 family peptidase"
                     /protein_id="HWX72893.1"
                     /translation="MRNLITDVPGLKVGHAEDARLGSGATAIVFDVPAVGSIDVRGGG
                     PGTRETALLDPAQTVEGIDAIALSGGSAFGLDAASGVQGWLKEQNRGFAVRGARVPIV
                     PAAILFDLLSGGDKEWGRFPPYRELGYAAAAAAGLDFALGSVGAGLGATTVDCKGGLG
                     SASAQSSDSHTVGALAAVNAAGSVLIGGGPWFWAAPFERDGEFGGRGLPPAFSAAALE
                     PYTKGSARESTTLVVVATDAVLNKAQAKRLAVMAQTGLARAIYPVHTQLEGDVLFAVS
                     TGRRPLADPLVGLTRLGALAANVVARAVARGVFEATALPFPGAVASWKDRFGR"
     gene            9891..11111
                     /locus_tag="VNY79_10360"
     CDS             9891..11111
                     /locus_tag="VNY79_10360"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HWX72894.1"
                     /translation="MKVVLIVIAALVTLGLAAVGVVAAQKGTLSSPPASPATERVARA
                     ANPAQTKAAPPTPVASPVRDTDALASTTVQLAPPAPAAPASIMAAPSPPPAPAAPQRA
                     AENTARPTLAAATATDHAGASAPAANIGVCDKPGGMGLARIVEIDTTGGPGFGFEHFK
                     QYDFLRAGEVVLTFDDGPWPENTPAVLRALSDNCLKATFFEIGQHAMWHPEIAKQVAA
                     AGNTIGTHTWSHKDLSKSPYAGDVEQAKQEIEMGISAVHSAVAGPISPFFRFPALQHP
                     PELLSYLAERSIASFSTDLDSFDFKMRKPQQVIESVMHKLQKQGKGIILMHDFQHATA
                     EAMPELIHQLRAGGYKVVHVVPRAPVTTVPKYDEMLMQQDKLSVNNTRPSDSVVRTIG
                     EYIGGAPPPGAAQR"
     gene            complement(11124..12371)
                     /locus_tag="VNY79_10365"
     CDS             complement(11124..12371)
                     /locus_tag="VNY79_10365"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009800050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HWX72895.1"
                     /translation="MAQTDVIVLGAGIVGTCCGVHLAKRGLSVALVDRGAVGEGTSYG
                     NTGIITGETLFPPAFPADWRSLLRIALKRSPLVNYHLGSLPRAASWLAAFAAASRPSR
                     LIETAEAMRPLFARAVAEHEALAAEAGAERYLNHRGWLKLYRTDAAFAAQAGELELAA
                     NFGIAPVTLDRDRALALEPALAGVFDRAVHWTGAVSVSNPLELTRAYAARFAVLGGVT
                     LAGDARTLRRANGHWRVETAAGPLDAGQALLALGPWTSDVLDPLGVRLPLAVKRGYHC
                     HFRPQGNAMLSRPVLDAENGYCLAPMEQGIRLTTGVEFAARDAPPTPVQLARVLPAAR
                     QLFPLGEPAEARTWLGARPCFPDSRPVIGRAPGQPGLWLAFGHAHWGLTLGPPTGRLI
                     AEMMTGATPFCDPQPYAAERFTR"
     gene            12610..13296
                     /gene="rpe"
                     /locus_tag="VNY79_10370"
     CDS             12610..13296
                     /gene="rpe"
                     /locus_tag="VNY79_10370"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004750 - D-ribulose-phosphate 3-epimerase
                     activity [Evidence IEA];
                     GO_process: GO:0006098 - pentose-phosphate shunt [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HWX72896.1"
                     /translation="MHRPLIIAPSILAADFAKLGEEVRAVDRAGADWIHVDVMDGHFV
                     PNISIGPDVVKALRAHTAKVLDVHLMIAPCDPYLEAFAKAGADIITVHVEAGPHLHRS
                     LQAIRALGKKAGVTLNPGTSEDTVAPVIDLIDLILVMSVNPGFGGQKFIPGAVEKLRK
                     LRALAAGRPIDIEIDGGITPEIAPEAARAGANAFVAGSAVFKDRTPASYRTHIAAIRH
                     AAALARGEAA"
     gene            13296..>14254
                     /locus_tag="VNY79_10375"
     CDS             13296..>14254
                     /locus_tag="VNY79_10375"
                     /EC_number="1.8.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009449820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004364 - glutathione transferase activity
                     [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HWX72897.1"
                     /translation="MGMLVEGRWTDADPIQETGRDGDFRRVESVFREFITADGSTGFR
                     AERGRYQLYVAHGCPWAHRTVIYRSLKKLKDFITVAYAIPGLSLEGWTYEDNPAFPDC
                     TPDRVNGFHYLHEAYTETDPFYTGKVTVPVLWDKKSRRIVNNESADIIRMLNTEFARH
                     GADPTDYYPAPMRAEIDRVNELVYTDINNGVYRCGFARSQEAYNEAYDALFAALDDLE
                     ERLNRQRYLIGRQITEADWRLFPTLVRFDVAYFSLFKCNRKRIADYPNLLNYMRELYQ
                     VPGIAETVKPRYYVRTYYSIKRLNPSGIIPKGTPVDYRQPFLAP"
BASE COUNT         2323 a         4882 c         4655 g         2394 t
ORIGIN      
        1 gcgccgacgg ccgccgcgct tggctggcgg gatcatcggc tcaaccagcg cccattcggc
       61 atccgtcagg tcactcggat atcgcagacc acgccgctca gcagcgcggc gatgttcagg
      121 tttccacatc tcggcacccc ccagtcgaag attcgggtgc cgcataacga atcacaaatg
      181 attcatccga acaacaactt tcgggatcgg ctctaacatt acagttgtga ttttttgctg
      241 acacatttgt ttgatttctg aatccatagg tcaccatgat tcggagatca tggatgatcg
      301 gagcatcgat tgagacgacg cgtgagttgt gggcatcgtc gctgcgagaa gtgaagaagc
      361 ggatacgtcc attgttcgcg caggagcgcg cagctttgaa cgctttgctg acctgaagac
      421 aacgagcttg tcgtcgttgt tcgcagaggt tgccgacata ttcaatctga tccggacaat
      481 cctgttcgat acatgcaggg gcgatcttag cccgaacagc gtctgaaact cttctatccc
      541 gcgggttact gcctaacgcc agagcccgat ttgcgattcc gctcgatggg taagcatgcg
      601 cttctggcgc atgcccatag gagtatcgtt tacggtgctg cccctgctac gatccatcga
      661 actcctgtcg gcgctgcgcg ccgaatctcg aagggtgacg ggggataatc gtcacccgcc
      721 ctgatcgcgg aattcgtgcg gcgtcgtgcc ggtgtgcttg cggaagaagc gggcgaagtg
      781 cgagggatcg gagaacgcca gctcgttggc gatatcctgg atcggctgcg cggtgaacac
      841 gagctggcgc ttggcttcgc tgagcacgcg ctggcggacg aggtggccgg cggtcacgcc
      901 ggtcgcgcgc ttgacgtggt cgttgagccg gtcgaccgtc atgccgagct gctcggcgta
      961 gaagccgagc tgccgctccc tgcggaagga ttcatcgacc agcgcgcgca gccgcgcgac
     1021 ggtggcgtcg gccggctgca gggtcacgct gccggtgcgc gcccggctcg ccgcgaggcg
     1081 ggcgacgccg atggcgatga gcgcgagcag gccgcgcatc gccagccgat agccctcgcg
     1141 cgcaagactg ctttcctcga agagctccgc acacagcgcc gagagccgcg accgctccgc
     1201 gtcctcggca atcggaacga tgggctgtac ggcaagcgcg cgcaaacgcg acagcgcctc
     1261 gccggcgcgg tcggcgagga ggccggcggc gtcctcagtg aagctcagca cccagccccg
     1321 ggtgaggttc ggctgaaagc gaaatccgtg cgccacggcg gcaggaacga ggatcgcggc
     1381 cggcgccgcg aacggcagcc tcgccgcctc gaacgtcatc tcgccgccgc cctgctcgat
     1441 cagcaggatc tgaaagaggt tgcgatgccg gtgcgcccgt atggtccagt catggattga
     1501 agatcgcgag gcaatcgttt caacgtgaat gaagtcgaac gcctgatcgt ccggaggatc
     1561 cccgtagagg tggaacaggg ggagcgccgt ggccatgccg cgagcatagg cccatcgcgg
     1621 cgaagaaaca tccgccgcga aagcgcgacg caagtgttac ccacaaacgg cggcagccgg
     1681 cgttacaccg gctgccgttg aaagactatg gcgaggcgtc agcggtccat gccgccaccg
     1741 tgctggccgc cctgcccggg cttgttctgg ccgctttgct gttcgccggg cttgcgttgc
     1801 tcgccgccct gctgctgctg accgggcttc tggccaccct gctgatgctg aggcttctgt
     1861 ccgccctgct gcgggttgcc ctgctgaggg ttgccctgct gctgctggtc acgccgcggg
     1921 ttgttctgct gctcgttcga catggaacgc tctccagtga tttcgtgggt tggcaccgcc
     1981 aaatgcggcc cccggccctc acgataaccc gcgaacggcg ccccggttcc gcttttggtt
     2041 gcggcatctg tgtgcaacgg attgaaatct ttggaaaaac aggcccgtgg agggggcgcg
     2101 gcgttgccgc tcgcggacgc ccctgttaag acgttgcgga cagcgcagac ggggacgcat
     2161 ggaatacttc gtccagcagc tcatcaacgg catcacgctc ggttcgatct acggcctgat
     2221 cgccatcggc tacacgatgg tctacggcat catcggcatg atcaacttcg cccacggcga
     2281 catcttcatg gtcggggcgt tcatcgcgct gattaccttc ctggtgctgg tcgccatcgg
     2341 cataaccgca gtgccgctgg cgctgctcat cgtgctcatc gtcgccatgg cgcttaccgc
     2401 gctctatgga tggaccgtcg agcgcatcgc ctaccgcccg ctgcgccact cgttccgcct
     2461 ggcgccgctc atttccgcca tcggcatatc gatcgtgctg cagaactacg tccaggtcgc
     2521 ccagggtgcg cgggtaaagc cgctgccgcc gctgatccac ggcggctaca cgctgttcga
     2581 gggcaatgac ttcgccgtgc ggctgtccaa cattcaggtc atcgtggtcg tgaccacgct
     2641 cttcctgatg gtcgggttct cctttctggt cgcccgcacg cggctcggcc gcaacatgcg
     2701 cgcctgcgag caggacctga agatggcggc gctccttggc atcgacgtcg atcgcaccat
     2761 ctcgctcacc ttcgtcatcg gcgcggcgct cgccgcggtc gccgggctga tgttcctgct
     2821 ctactacggc gtcgtcgatt tcttcatcgg ctttctcgcc ggggtgaagg cgttcaccgc
     2881 ggccgtgctc ggcggcatcg gctcgctgcc cggcgccatg ctcggcggta tcctcatcgg
     2941 cctcatcgag acgatgtggt cggcctattt ctcgatcgag tacaaggatg tcgccgcctt
     3001 cggcgtcctc atcgtcgtgc tcattttcct gccgaccggc atcttgggcc ggcccgaagt
     3061 cgagaaggtg tgagggagcg gccgcgcgtg ctgcgcgaca acgagcccag caagccgcct
     3121 gcatttgtcg ccgcggccaa ggaggccgcg ctttcggcgc tggtcgcgtt cggcctgttc
     3181 gtgaccttga tcggcgttcg caccgaccag gggccgaccg gtgcgctggt gatcgccacg
     3241 cgcttcgggc cgctcgcggc catcgtggcc gccgtgttcg tcgccgcgtt catcagggcg
     3301 ctcgtcttcc gcgacgccac cgtgatttcg cttggccgcc tggtgccgcc gcgtgtcacc
     3361 gcggttgtat ccggacttgc cggctatgcc gcgatcgcgt tcctcgtcgt cgcgctcgtc
     3421 gtgccggtgt tggcctacac gaaccgctac tatctcgacc tcgcgatact gatcgccacc
     3481 tacacgatgc tcggcttcgg gttgaacatc gtggtcggcc tcgccgggct cctcgacctc
     3541 ggttacgtcg cgttctatgc ggtcggcgct tattcctatg cgctgatcgc acagaatttc
     3601 ggcctctcgt tctggatctg cctgccgctc gccggcatcc tcgccgcgtt cgccggcctc
     3661 ctcctcggct ttccggtgct gcggctgcgc ggcgactacc tcgccatcgt caccctcggc
     3721 ttcggcgaga tcatccgcct gatcctgctc aactggcagg accttaccgg cggcccgaac
     3781 ggcatctccg gaattccgcg cccctcgttc ttcggcctgc cgttcacggc cggcgagaac
     3841 ggcttcgccg cgacctttgg cctgaagtat tcggcgacgc accgcgtcgt gttcctctac
     3901 taccttatcc tcgcgcttgc gctcgccacc aactggttca cgctgcggct gcggcggttg
     3961 ccgatcgggc gcgcgtggga ggcgctgcgc gaggacgaaa tcgcttgccg cgcgcttggc
     4021 gtgaatacca ccacgaccaa gctcaccgcg ttcgcgctcg gcgccatgtt cggcggcttc
     4081 gccggcgcgt tcttcgccac ccggcagggg ttcatcagcc cggagtcctt cgccttcggc
     4141 gagtcggcgc tggtgctggc gatcgtcgtc ctcggcggca tgggctcgca gctcggcgtc
     4201 gccgtcgccg cgaccgtcat gctcggcggc ttcgagctgt tccgcgagtt cgcgcaatac
     4261 cgcatgctgg tgttcggcgc cgccatggtc gcgatcgtga tctaccggcc gcgcgggctc
     4321 gtttccacgc gcaccccctc ggtatttctc accgaaggca aagtcattcc cgctgctatc
     4381 gtgcaggccg cgcgcacgga gacgccggca tgagtccgac gcagatcctt gtggtcgagc
     4441 acctgaccat gagtttcggc gggctcgtcg ccgtgagcga tctttccttc gacgcgcgcc
     4501 ggcgcgagat cacggcgctg atcgggccga acggcgccgg caagacgacc ctgttcaact
     4561 gcatcaccgg tttctaccgg ccgacggtcg ggcgtttgca gctcgcccat ccggacggcg
     4621 cctcgttcat gctcgagcgc atgcccgagt tccgcatcgc ccgcgaggcg cgcgtcgcgc
     4681 gcacgtttca gaatgtgcgg ctgtttccgg gcatgacgct cctggaaaat ctgctcgtcg
     4741 cccagcacca ggcgctgatg ctcgcctcgg gcttcaccgt gctcggcctg ttcggctcgc
     4801 gccgctacgc ccgcgccgaa gcgaacgcca tcgacaaggc gcgctactgg ctcgaccgcg
     4861 tcgggcttgc cgcccgcgcc gacgatgccg ccggcaccct tccctacggc gcgcagcgcc
     4921 ggctcgagat cgtgcgcgcg ctgtgcaccg atccggtgct gctctgcctc gacgagcccg
     4981 ccgccggcct caacaacaat gagagcgccg agctgaacaa attcctgcgc gcggtccgtg
     5041 aggagcacgg tacgtcgatc cttttgatcg agcacgacat gggcgtggtg atggagattt
     5101 ccgaccgtat cgtggtgctc gaccacggcc tgaaaatcgc cgaggggacg ccggaggagg
     5161 tgcgccacga ccccaaggtg atcgccgcct atctcggcgt cgccgacgcc gagcttgacc
     5221 acgtcgacgc ggaggtcgcg ccgtgagtgc cgccgtcggc agcgctgcaa tcagcaaccc
     5281 gctgctgatg ctgcgcgggg tcaagaccta ctacggcaac gtgatcgcgc tcaaaggcgt
     5341 cgacgtcgat gtccacgagg gcgagatcgt cgccttgatc ggcgccaatg gcgccggcaa
     5401 gtcgaccttg atgatgacgg tgttcggcaa tccgcgcgcg agcgagggcg agatccgctt
     5461 cgccggccgc gacatcaccg caatggcgac gcatgagatc gccaagctgc gcatcgcgca
     5521 gtcgccggag ggccggcgca tcttcgcgcg catgacggtg ctggaaaatc tgcagatcgg
     5581 cgccacggtg agcggcggcg gcgacttcga gggcgacctt gagcgggtgt tcacgctgtt
     5641 cccgcggctg cgcgaccgag tgaggcagcg cggcggcacg ctctcgggcg gcgagcagca
     5701 gatgctggcg atcggccgcg cgctcatggg ccggccgcgg ctcatcctgc tcgacgaacc
     5761 gtcgctcggc ctggcgccgc tcctggtgca gcagatcttc gccgcgatcc gcgccctcaa
     5821 cgaacgcgac cggctcaccg tgttcctggt cgaacagaac gcctatcacg cgctcaagct
     5881 cgcgcatcgc ggctacgtca tggtcaacgg cgagatcacg ctcaccggca acgggcgcga
     5941 attgctgcag cggccggaga tccgcgccgc ctatctcgaa ggccagacgc gctgaacgag
     6001 gtggagatgg ccgaactcta cgccggcgag agcatcggag cgattgtcct ggtcaccggg
     6061 ttcctcggcg gcggcgccgc ctggctttcc ggccgcgcca ttgccggcgc gtggcatccg
     6121 ccatggcatg ttgccctcgt cgcactcctg ctcggggccg cggcgcgctt catccacttt
     6181 gccttgttcc acggcgaact gctctcggcg ccgtcctatg cgtgcgacac cctgatcttg
     6241 ttcattgtcg ggctcctcgc ctggcgcgcg actcgcgcca gccagatggt gcggcaatat
     6301 ccctggctct atacccgcgc cggccccttg caatggcgca aagttgggcg ggaagactta
     6361 ccgcggcagt gataatttcg gcgtattctg ctagcacctg aggacgacct tacctcaagg
     6421 ggaccagaca tgaacaagct gcggctttgc gctctcgcgt tccttttcgg cctcttcgcg
     6481 gcgccggcca tggcgcagga catcaccgtc gccgtcgccg gcccgatgac cagcggccag
     6541 gcgaccttcg gccggcaaat gaagaacggg gccgaccagg cgatcgccga catcaatgcg
     6601 gcgggcggcg tgctcgggcg caagctcaag ctcgaggtcg gcgacgatgc ctgcgatccc
     6661 aagcaggccc ggtcggtcgc ggaaaagctc gtcggcaagc aggtggccgc cgtggtcggc
     6721 cactactgct catcgtcgtc gatcccggcc tccgacgcct acctcgacgg cggcgtcctg
     6781 cagatcacgc cggcgtcgac caatccgctg ctcaccgatc gcggcatgtg gaacacgttc
     6841 cgcacctgcg gccgcgacga ccagcagggc ggtttcgccg ccggctatct tgcgaagcat
     6901 ttccgcgaca agaagatcgc catcatcaac gacaagacca cctacggcaa aggtctggcc
     6961 gacgaggtga agaaggcgct caacgccgcg ggcgtgaagg agaagctcta cgagtcctac
     7021 aacatgggcg acaaggactt caccgcgctc gtctccaagc tcaagctcaa cggcatcgat
     7081 atcgtctatg acggcggcta ccaccaggaa gccggactga tcgtgcggca gatgcgcgat
     7141 cagggcctca agacgatgct gatgtcgggc gacgccatgg ccgatcgcga gttcgcctcg
     7201 atcaccggcc cggcggcgga aggggtcctg ttcacattcg gcccggatcc gcgccggcgc
     7261 acgaccgcag ccgccatcgt caagaagttc aaggacaagg gaatcgatcc cgagggctac
     7321 acgctttaca cctatgccgc cttccaggtc tgggcggcgg cagccacgaa ggccggcacc
     7381 ctcgatccac agaaggttgc cgcggccatg cattccggca cctgggacac ggtgctcggc
     7441 ccgctctcct tcaacaagaa gggcgacatc accgccatcg gctgggccgt ctaccgctgg
     7501 gacaaaaacg gcaactacga cgagatcacc gaggagtcgc gcacctgacg agcgcgtctt
     7561 tccggattgt cattccgggg cgccaagtgc accaagcgat ttcccgtcat cctgaggcgc
     7621 tcgtcgcgca gcgacgagcc tcgaaggatg cggcccaggt gccgatcaaa atcggctttc
     7681 cgatttcgag aaatattagc ggccaagtca gcaacagccg acttggccgc cggcgccctt
     7741 cgaggcccgc gcttcgcgcg ggcacctcag ggtgacggtg acagtcgcta cccaattttt
     7801 ccgagcaccg ggaacgtctc catcagccag aaactcgcct gcgtgaccgc gccggtgagg
     7861 aaggcgatgc cggtgagcac gaggagaccg cccatcgcct tctcgacaag gccgagatgg
     7921 gcgcggaagc gggcgagaaa agcggcaaac ggctcgaccg cgaacgccgc ggcaatgaag
     7981 ggaacgccga ggccgagcga atagacggcg agcatgccgg cgcccttcgc caccgtttcc
     8041 tccgacgccg cgacggcgag aatggcggcg aggatcggcc cgatgcacgg cgtccagccg
     8101 aacgcaaacg caagccccat cagataggcg ccccaaaggc cgaccggctt ggcgacttca
     8161 agccgcttct gccgcatcaa caggccgatc ggcgccagcc cgaggaaatg caggcccatc
     8221 accacgatga tgatgccggc ggcaatcgcg agctcgcccg aataggcccg cagcacggcg
     8281 ccgatcgcgc tcgcgccggc gccaagcgcc acgaacacgg tggagaagcc gagcacgaac
     8341 aggaaggcgg cgaggagcgt ctcgcgccgc acccgcggtt cggcttccgc gtcggcgaag
     8401 cgttcgagcg aggtgccggt gagatagacg aggtaaggcg gcaccagcgg cagcacgcag
     8461 ggtgaaagaa agctcaacat gccggcgaca agcgcggcgg cgatggtgac gtgcggcatg
     8521 gcgctctcat gcccgcgcgc tcccgggggc gcaaggcagg cgcgaggctc ccgcgaggat
     8581 gtgaacggat gttattggtg tgatcggatg caaccttggc gccgtatgct gccgccagcg
     8641 aggcggaatc cggtgcgttg ccgcgggatg tgtgattatg cgtggccggg ttcgcacctt
     8701 gggcgcggcc gtcatgagcg cgcgccggaa taacgggagt acgtcttgcg caacctcatc
     8761 accgacgttc ccggcctgaa agtcggccac gccgaggacg cccggctcgg ctccggcgcc
     8821 actgcgatcg tattcgacgt accggcagtc ggttcgatcg acgtgcgcgg cggcgggccg
     8881 ggcacgcgcg agaccgccct gctcgatcct gcgcagacgg tcgaaggcat cgacgcgatc
     8941 gcgctctccg gcggctcggc tttcggcctc gatgccgcct ccggcgtaca gggctggctc
     9001 aaggagcaga accgcggctt cgccgttcgc ggcgcgcgcg ttccgatcgt gccggcagcg
     9061 atcctgttcg atctcctcag cggcggcgac aaggaatggg ggcgcttccc gccctaccgc
     9121 gagctcggct acgccgcggc agccgcggcc ggtctcgact ttgcgctcgg cagcgtcggc
     9181 gccgggctcg gcgcaaccac cgtcgactgc aagggcggcc tgggctccgc ctcggcgcaa
     9241 agttcggaca gccacaccgt cggcgcgctc gccgccgtca acgccgccgg cagcgtgctg
     9301 atcggcggcg gaccatggtt ctgggcagcg ccgttcgagc gcgacggcga gttcggcggg
     9361 cgcgggctac ctccggcgtt ctccgcggcg gcactcgaac cctacaccaa gggcagcgcg
     9421 cgcgagagca cgacgctcgt cgtcgtcgcc accgacgccg tgttgaacaa ggcgcaggcc
     9481 aagcgtcttg ccgtcatggc gcaaaccggt ctcgcgcgcg ccatctatcc ggtgcacacg
     9541 cagctcgaag gcgacgtgct gtttgctgtc tcgacgggcc gccggccgct cgccgatccg
     9601 ctcgtcggac tgacgaggct tggcgcgctt gccgccaatg tcgtggcgcg ggcggtcgcg
     9661 cgcggtgtat tcgaggcgac ggcgcttccg tttcccggcg cggtcgcgag ctggaaagac
     9721 cggttcggcc gctgaaaaaa ggaaagattg cggcagcgcc gcgtcccttt agtgccggag
     9781 aaaccacaat tgttctcttt cgcgtgtaga cccatcgcga ccgttgacac agtcgcagat
     9841 tgcgctttga gtccgccccg tggggttgct tttttgggtg gagggatacg atgaaggtcg
     9901 tattgatcgt cattgccgcg ctggtgaccc tgggtctcgc ggcagtggga gtcgttgcgg
     9961 cgcaaaaggg caccctttcg tccccacctg cgtcgccagc tacggaacgc gtcgctcgcg
    10021 ccgccaaccc cgctcagacc aaggccgcgc ccccgacgcc ggttgcgtcg ccggtccgtg
    10081 acaccgacgc gctcgcgtcg accaccgtcc agttggcacc gcccgcgccg gccgcgccgg
    10141 cgtcaatcat ggcggcaccg tcgccgccgc ctgctcccgc cgcgccacag cgcgccgccg
    10201 agaatacggc ccgcccgacc ctcgcagcgg cgaccgcgac cgaccacgcc ggcgcctccg
    10261 ccccggccgc caacatcggc gtctgcgaca agccgggcgg catgggcctt gcgcgcatcg
    10321 tcgagatcga cacgaccggc gggccgggct tcggcttcga gcatttcaag cagtacgatt
    10381 tcctgcgcgc cggcgaagtg gtgttgacct tcgacgacgg tccgtggccc gagaacaccc
    10441 ccgccgtgct ccgggcactc tccgacaatt gcctcaaggc gacgttcttc gagatcggcc
    10501 agcacgcgat gtggcacccg gaaatcgcca agcaagtggc ggccgccggc aacaccatcg
    10561 gcactcacac ctggtcgcac aaggatctgt cgaagagccc gtatgcgggc gacgtcgaac
    10621 aggccaagca agagatcgag atgggcatca gcgccgtgca ttcggccgtc gccggcccga
    10681 tctcgccgtt cttccgcttc cccgcgctcc agcatccgcc cgagctcctg agctacctcg
    10741 ccgagcgcag catcgcgagc ttctcgaccg acctcgactc gttcgacttc aagatgcgca
    10801 agccgcagca ggtcatcgag tcggtgatgc acaagctgca gaagcagggc aagggcatca
    10861 tcctgatgca cgacttccag cacgctaccg ccgaagcgat gccggagctc atccatcagc
    10921 tcagggccgg aggctacaag gtcgtgcacg tcgtgccgcg cgcgccggtg acgacggtgc
    10981 cgaagtacga tgaaatgctg atgcagcagg acaagctgtc ggtgaacaac acgcgcccga
    11041 gcgacagtgt cgtgcgcacg atcggcgagt atatcggcgg cgcgccgccg cccggcgcag
    11101 cgcagcgcta agcgcagcga ccttcagcgc gtgaagcgtt ctgccgcgta gggctgcggg
    11161 tcgcagaacg gcgtcgcgcc ggtcatcatc tccgcaatga gccgcccggt cggcgggccg
    11221 agcgtcaagc cccaatgcgc gtgaccgaag gcgagccaga gaccgggctg gccgggtgcg
    11281 cgcccaatga ccggccggga atcggggaaa cagggccgtg ccccgagcca ggtccgcgcc
    11341 tcggcgggtt cgcccagcgg gaataattgc cgcgccgccg gcagcacacg cgctagctgg
    11401 acgggcgtag gcggcgcgtc gcgcgcggcg aattcaacgc cggtcgtgag gcggatcccc
    11461 tgctccatgg gcgccaagca atagccgttc tcggcgtcga gcaccgggcg gctgagcatg
    11521 gcgtttccct gcgggcggaa atggcagtga tagccgcgct tgacggcgag cggcagccgc
    11581 acgccgagag gatcgagcac gtcgctcgtc caggggccga gcgcgagcaa ggcttggccg
    11641 gcgtcgagcg gccccgccgc ggtctcgacc cgccagtgcc cgttggcgcg gcgaagcgtg
    11701 cgcgcgtcgc cggcgagcgt gaccccgccg agcaccgcga agcgcgccgc ataggcgcgc
    11761 gtaagctcca gggggttgct cacgctcacc gcgccagtcc agtgcacggc gcgatcgaaa
    11821 accccggcga gcgccggctc gagggcaagc gcccggtcgc ggtcgagcgt cacgggggcg
    11881 atgccaaaat tcgccgcaag ctcgagctct cccgcctgcg ccgcgaaggc ggcgtcggtg
    11941 cggtaaagct tgagccagcc gcggtggttc aggtagcgct cggcgccggc ctcggcggca
    12001 agcgcttcat gctcggcgac ggcacgcgcg aacagcggcc gcatcgcttc cgctgtttcg
    12061 atcagccgcg acggccgcga cgcggcggcg aaagccgcga gccacgacgc ggcgcgcggc
    12121 agagagccga ggtgatagtt gaccagtggc gagcgcttga gcgcgatgcg caggagcgag
    12181 cgccaatccg ccggaaaggc cggcggaaag agtgtctcgc ccgtgatgat gccggtgttg
    12241 ccgtaggagg tcccctcgcc caccgcgccg cggtcgacga gcgcgaccga caggccgcgt
    12301 ttggcaagat ggaccccgca gcaggtgccg acaatgccgg ccccgagcac gatgacatcg
    12361 gtctgcgcca cgaaccctcc gccgagccaa ccgctctgca tatacccggc atgccggccg
    12421 gaaccagcat ttgcccgaac cggaccggcg tgttacgcga gccgcgaatc gcttattccg
    12481 ctcattcccg gacggcggga atgcggacgg ccctcgtcat cagcgggctt ggcggctctc
    12541 cgcttcgtgg agacgggcgg agatgcggtc ggcggctcaa atcgtcactc ccgctgcatg
    12601 gaggacttgt tgcatcgccc gttgatcatc gctccgtcga tcctcgccgc cgatttcgcc
    12661 aagctcggcg aggaggtgcg cgccgtcgat cgggccggcg ccgactggat ccacgtcgat
    12721 gtcatggacg gccatttcgt gcccaacatc tcgatcggcc ctgacgtggt gaaggcgctg
    12781 cgcgcgcaca ccgccaaggt gctcgacgtg cacctgatga tcgcgccgtg cgatccctat
    12841 cttgaggcct tcgccaaagc gggggccgac atcatcaccg tgcatgtgga agccggcccg
    12901 cacctccacc gttcgctgca ggcgatccgg gcgctgggca agaaggccgg cgtgaccttg
    12961 aatccgggaa cctcggagga cacggtcgca ccggttatcg atctcatcga cctgatcctg
    13021 gtcatgtcgg tcaatccagg ctttggcggg cagaaattca ttcccggcgc ggtcgagaag
    13081 ctgcgcaagc tgcgcgcgct cgccgccggc cgcccgatcg acatcgagat cgacggtggc
    13141 atcaccccgg agattgcgcc tgaggcggcg cgcgccggcg ccaacgcgtt cgtcgccggc
    13201 tccgccgtgt tcaaggatcg gaccccggcg tcctatcgca cccatatcgc ggccatccgc
    13261 cacgcggccg cgctcgcacg cggggaggct gcctgatggg catgctggtc gaaggccgct
    13321 ggaccgatgc cgatcccatt caggaaaccg gtagggacgg cgatttccgg cgggtggaaa
    13381 gcgtcttccg cgagttcatc accgccgacg ggtccacggg ctttcgggcc gagcgcgggc
    13441 ggtaccagct ctatgtcgcc cacggctgcc cctgggcgca ccgcacggtg atctatcgct
    13501 cgctcaagaa gctcaaggat ttcatcaccg tcgcctacgc cattcccggc ctgtcgctcg
    13561 agggctggac ctatgaagac aatcccgcgt ttcccgattg cacgccggac cgggtcaacg
    13621 gctttcacta tctgcacgag gcctataccg agaccgaccc gttctacacc ggcaaggtga
    13681 cggtgccggt gctgtgggac aagaagtcgc ggcggatcgt gaacaacgaa tccgcggaca
    13741 tcatccgcat gctcaacacc gagttcgccc gccacggcgc cgatccgacc gactattatc
    13801 cggcgccgat gcgcgccgag atcgaccgcg tcaacgagct cgtctacacc gacatcaaca
    13861 acggcgttta ccgctgcggc ttcgcgcgct cgcaggaggc ctacaacgag gcgtacgatg
    13921 cgctgttcgc ggcgctcgac gacctcgagg aacggctcaa ccgccagcgc tacctgatcg
    13981 ggcggcaaat caccgaggcc gactggcgcc tgttcccgac gctggtgcgc ttcgatgtcg
    14041 cctatttttc gctgttcaaa tgcaaccgca aacggatcgc cgactacccg aaccttctga
    14101 actacatgcg cgagctctac caggtgccgg gcatcgccga gaccgtcaag ccgcgctact
    14161 acgtgcgcac ctactactcg atcaagcgcc tcaacccgtc cggcatcatt cccaagggga
    14221 cgccggtcga ttaccggcag ccgttcctgg cgcc
//
LOCUS       DATMQB010000361         3427 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2958078, whole genome shotgun sequence.
ACCESSION   DATMQB010000361 DATMQB010000000
VERSION     DATMQB010000361.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3427)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3427)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3427
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2958078"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(37..258)
                     /locus_tag="VNY79_10380"
     CDS             complement(37..258)
                     /locus_tag="VNY79_10380"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72898.1"
                     /translation="MSGSKRVQVPPSGFYVATLVTNDVISVEGDQRVLRHTGDSWVVP
                     AGQPLVLEPQGKNHTVLLEVFRVEPSPTR"
     gene            complement(473..1708)
                     /locus_tag="VNY79_10385"
     CDS             complement(473..1708)
                     /locus_tag="VNY79_10385"
                     /inference="COORDINATES: protein motif:HMM:NF024753.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-binding-like beta-propeller repeat protein"
                     /protein_id="HWX72899.1"
                     /translation="MAPTGSCRASPYKDTIIFGAPDPAPSVDGGLGSARLYSLDQATG
                     ALVWKSDLVARVNGCSFGATGEQHERIAYSSPLVHGDRVYVGIHDAGDDPIQNGKLIA
                     LDADTGHIRPAFNFEATSVRGGGIWNAPAAERDDVLFTTGNTSDGVVSEPVPNHGLSM
                     MSVEARSGAINWQFQPVPFALDDDPDWSAGVALARTSCGRIAASVMKDGWTYALNANN
                     GKCRWQFPATVPPADHCLFPASGAHVHGDTDYKRPAAIWRNTLAIVTGGEALVAAGGV
                     FNGYGRMHGLNLCAASPSHRVRWIADVPHNGGGGYSLGAPSATHGIFYITTDQGHVVA
                     IADPAVAPPAGVRCSQVLTAVANCAALGFSLVYAPAVLADVALTDGADAAGLRNEPAI
                     ANGRLFVATQGGHVYMLSP"
     gene            complement(2087..2458)
                     /locus_tag="VNY79_10390"
     CDS             complement(2087..2458)
                     /locus_tag="VNY79_10390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72900.1"
                     /translation="MAELPPPSPDLPIFAGQPATHPFEAMSGQAAASRVLFEGAGPDN
                     TQIVIREMLIGPGADVRLDALPGLALVDPRSGVGTLRAGDRSEQLQIGTAISVKPGIP
                     IELTNDGDDSLMLRLYIVEAR"
     gene            3029..>3427
                     /locus_tag="VNY79_10395"
     CDS             3029..>3427
                     /locus_tag="VNY79_10395"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HWX72901.1"
                     /translation="MLAVPRESSGAAMAATRALVRRGVKRLHLITLPTSSLQADLLIG
                     AGCVETLDTSGVSLGEFGPAPRFSSATISSAVHVRDATCPALHAQFQAAEKGVPFMPL
                     RGLIGSDVLAHRPDWKIFDNPFGNDDPIVLL"
BASE COUNT          603 a         1161 c         1081 g          582 t
ORIGIN      
        1 cagccgggtc gagttcgcca ttagttctgt cgatcactac cgcgtcgggc tcggctcgac
       61 ccggaacact tcaagcagca ccgtgtggtt cttgccctgc ggctccagca ccagcggctg
      121 tcctgcgggc accacccaag agtcgccggt gtgacgcagc acccgctggt cgccttcgac
      181 gctgatgacg tcgttggtca caagcgtcgc gacgtagaaa ccggagggcg gaacttgcac
      241 gcgtttgcta ccgctcacct tgatgtcgcc gagagccaat cggtacgtct gcgcttgacc
      301 gcccggcgcc ggaagttcag ccgtcgtcgc gaaccgcact gcggaagcga cgccgcgtgt
      361 agttccggcg gctccgggcg cgggtcccgc ctgctgcgca aaggcggcgg acgacgcaag
      421 gacgatcgat gcgaatccca gacatacttt cattgtcgcg gcctccccag tttcagggcg
      481 acaacatgta gacgtgtccg ccctgcgtcg cgacaaacag gcggccgttt gcgatagcag
      541 gctcgttgcg cagtcccgca gcgtcagcgc cgtccgtcag cgccacatcc gcaagcaccg
      601 ccggcgcata gacgagtgag aaaccgagcg ccgcgcagtt cgcgactgca gtgagcactt
      661 gcgagcatcg aacgccagcg ggcggcgcga cggctggatc ggcaattgcg acaacatgcc
      721 cttggtcagt ggtgatatag aagatcccgt gagtcgcaga aggggcgccg agcgagtatc
      781 cgccgcctcc gttatgcggc acgtcggcga tccagcgaac gcggtggctc ggcgacgcgg
      841 cgcagaggtt gagaccatgc atgcggccat aaccattgaa gacgccgccc gccgccacga
      901 gcgcctcgcc gccagtcacg atcgccagcg tgttccgcca aatggcggct ggacgcttat
      961 agtccgtatc cccgtggacg tgcgcgccgc tcgccgggaa caggcaatga tcggcgggcg
     1021 gcacggtcgc gggaaattgc cagcggcact tgccattgtt cgcgttgagc gcatacgtcc
     1081 agccatcttt catcaccgac gcggcgatgc gcccgcagct tgtccgcgcg agcgccacgc
     1141 ccgcggacca atcgggatcg tcgtcgagcg cgaagggcac gggctggaat tgccagttga
     1201 tggcgcccga cctagcctcg acgctcatca tgctcagccc gtgatttggc actggctcgg
     1261 acaccacccc gtcgctggtg tttcccgtcg tgaacaggac atcgtcgcgt tcagccgccg
     1321 gcgcgttcca gatcccgcct cctcggacgc tcgtcgcctc gaaattgaac gctggcctaa
     1381 tgtggccggt atccgcatcg agcgcgatca gcttgccatt ctggatcgga tcgtcgccgg
     1441 cgtcgtggat gccgacatag accctgtcgc catgtacgag cggcgaagaa taggcgatgc
     1501 gctcgtgttg ctccccggtc gcgccgaagc tgcacccgtt gactcgggcg acgaggtcgc
     1561 tcttccacac cagcgcgccg gtcgcctgat cgagcgaata gagccgcgcg ctgccaagac
     1621 cgccatcgac gctgggggcc ggatcggggg cgccgaagat aattgtgtcc ttgtaagggc
     1681 tcgctcgaca agatcccgta ggcgccaaag gcctgcacgt cgccgaccga gccgcaggag
     1741 ccgatcagcg gaggctgcgg caggggcggg taactccaga tcaagacgcc cgtattggcg
     1801 tcgagcgcat agaacctgcc gctcgtgctg ccgatgaata cgcgaccgtc gatcacgacc
     1861 ggcgaggcgt aaaacattcc gccctcgcca gtcgtgggtg gccattgcca gcggatcgcc
     1921 aagcccggca ccttggctgg gtcagccagg tcgctgaagt ggcgctgctc cccgctgcgg
     1981 gacacgtcat ggcgatagtg ctcccagtcg tcgtccgccg cccacgcaac cgtcgcgcag
     2041 cccacgaccg ccgctacgca ggcggcgatc cctgctctgc tcaccatcat cgcgcctcca
     2101 cgatatagag cctcagcatc agagaatcgt cgccgtcgtt cgtgagttca atcggaatgc
     2161 ccggcttcac ggagatcgcc gtgccgattt gcagttgctc agagcgatcg ccggcccgca
     2221 aggttccgac accggaacgc gggtcaacga gcgccaagcc cggcagcgca tcgaggcgca
     2281 catccgcccc gggaccgatc agcatttcgc ggataacgat ctgagtattg tcggggcctg
     2341 ctccctcgaa cagaacgcgc gaggcagcgg cctgcccgga catcgcctcg aagggatggg
     2401 ttgccggttg gccggcgaag atcggcaagt ccggcgaagg aggcggcaac tcggccattc
     2461 ccggctcttg atcttgcccc caagccgccg aacaggccgc caacgagagg gcgacgagac
     2521 ccaaatatgc gacccgtcgc atgggaaccc tcgtcgcaaa taactgttgc agaaggccga
     2581 cattcgccgg atgccgcctc cgacgacggc caatatgccg gtattgggcg attttctcaa
     2641 gcgaccggtt ccatagtgcc ccacgcgctc gaggagtccg gaacggccgt tgcgcggtga
     2701 actccgtcca atccggcccc gtcacggcgc acgtcccccg tcagtttgag tcgaacgcgt
     2761 cacacttgct gctgtcgagc gcgtaatcca ccaagcgcga tcgcgtccct cgcatggcca
     2821 gcatcgaacc gcgcctcagc caacaagcgt tcgcctctat gccatttcga tccgagtttg
     2881 ggcgcacatg aagctgatcc ggtagcgaaa tcggcgttgt cgtaacgctt tccctctccc
     2941 cgccagcggg gagaaggagt aattttccgc aatgtccacg attgcccgta cgctcgacga
     3001 ggcgctcgcg cccatcaccg acggctgcat gctggcggtg ccgcgcgaaa gctcgggcgc
     3061 ggccatggcg gcgacgcgag cgctggtccg gcgcggcgtc aagcggttgc acctgatcac
     3121 actgcccacg tcgagcttgc aggcggacct tctgatcggc gccggctgcg ttgagacgtt
     3181 ggatacctcc ggtgtcagcc tcggcgagtt cgggccggcg ccgcgttttt cgtcggcgac
     3241 aatttccagc gcggtccacg tgcgcgacgc cacgtgcccg gcgctacacg cgcagtttca
     3301 ggccgccgag aagggcgtgc cattcatgcc cctgcgcggc ctcatcggct ctgatgtgct
     3361 ggctcaccgg cccgactgga aaatcttcga taatccgttc ggcaatgacg acccgatcgt
     3421 gctgctg
//
LOCUS       DATMQB010000362         3314 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4180076, whole genome shotgun sequence.
ACCESSION   DATMQB010000362 DATMQB010000000
VERSION     DATMQB010000362.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3314)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3314)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3314
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4180076"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..152)
                     /locus_tag="VNY79_10400"
     CDS             complement(<1..152)
                     /locus_tag="VNY79_10400"
                     /inference="COORDINATES: protein motif:HMM:NF012334.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HWX72902.1"
                     /translation="MDLKLQGMTALVTGGSEGIGKGIAWALAKEGVDVAICARRKEPL
                     ETAAKE"
     gene            complement(185..2563)
                     /locus_tag="VNY79_10405"
     CDS             complement(185..2563)
                     /locus_tag="VNY79_10405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009398977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HWX72903.1"
                     /translation="MAPPDAKPKEKFVGRSVPRLEDRPLLTGRGRFAADISFPRQLHM
                     RVVRSNFAHGRIRSIDPSAALAKAGVHAVWTAADTADIPPIDFRLTRIECLEPYRQRL
                     FATGTVRYVGEPVAAVFADDPYLAEDAAELVVLDVEELPPLLRADAEPGEFEPGRSTE
                     PAIVRKGYGDIDAAFRSAHAVVEATLSIGRHSAVPIETRGAIARYDAADDMLELHGAA
                     KVPHWNRAQIARMFGRALSSVHLYEGHVGGGFGVRGELYPEDVLVCAAAMRLRRPVKW
                     IEDRREHLIAANHSRQQCHHVRAAVDRDGRILAIEDEIFHDQGAYMRTHAATVPDLTA
                     AMLPGPYRVPAYRADVHIRLTNKTPCGTYRAPGRFESTFVRERLLDAIAARLRLDRIE
                     VRRRNLIALQEMPYARPLDTLGTGIVLDSGDYAGLLDKALAAVEWPRLREKLAQRRAA
                     GELVGAGVALFVEKSGLGPIDEVRISVDEQGTVEVVSGSASVGQGMETVLAQICADAL
                     GVDCHRVRVVHGQTNRIERGMGAFASRVTVMTGEATRIAAAALRTKAIEAAAELLQAP
                     AAVLDVVDGEVVRTDSGAGPSIGLAAIARALGRGSKLGAEHPLGLTAEGSFTSNHMNY
                     PYGVHIAVTRVDAETGAVDIERFLIAYDVGKAVNPMLIEGQIVGGCAQGIGGALLEEF
                     LYDERGEPLSVTLADYLMPTAREVPPVQVLIREDAPSPLNPLGLKGAGEGGANAVGAA
                     LAAAIDDALGAPNAVTELPITPLRLKRLIGHAGRGERLAAKPQPLDRPDEAR"
     gene            complement(2598..3074)
                     /locus_tag="VNY79_10410"
     CDS             complement(2598..3074)
                     /locus_tag="VNY79_10410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HWX72904.1"
                     /translation="MSERSDITLTINGHAHAIRVEPRRTLVDAIREDCGQTGTHIGCE
                     HGVCGACTVLVDGEPVRSCLMLAVQADGREIRTVEGLANGDDLNPLQRAFMEHHGLQC
                     GFCTPGFLMLVTGVLEREPDISDDDLVDVLSSNLCRCTGYQSIVKAVRAAAAQMRR"
     gene            complement(3071..>3314)
                     /locus_tag="VNY79_10415"
     CDS             complement(3071..>3314)
                     /locus_tag="VNY79_10415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72905.1"
                     /translation="FLPPTSREMPPIELLHLETLDGTTVTQAKGLGEGGAIGAPAAVL
                     NAVNDALAPFGVTIEEIPATPRRIRAALRQATKKPR"
BASE COUNT          505 a         1130 c         1143 g          536 t
ORIGIN      
        1 atctccttgg cggcggtttc gagcggctcc ttgcggcgcg cgcagatggc gacgtcaacg
       61 ccttccttcg ccagcgccca tgcaatgccc ttgccgatgc cctcgctgcc gccggtcacc
      121 agcgccgtca tgccttgaag tttcaggtcc atcgttggtt tctcccggga gtgccgcctg
      181 ttgattatcg ggcctcatcc ggccggtcca gcggctgcgg tttggcggca agacgctcgc
      241 cgcggcctgc gtgcccgatg agccgcttga gccgtagcgg ggtgatcgga agctcggtga
      301 cggcattggg cgcgcccagc gcatcgtcga tcgcggcggc gagcgcagcg ccgaccgcat
      361 tggcgccgcc ctcccccgcg cccttcaatc ccagcggatt gagcggactt ggcgcgtcct
      421 cgcggatcag gacttggacc ggcggcacct cgcgcgcggt cggcatgagg tagtcggcaa
      481 gcgtcaccga cagcggctcg ccgcgctcgt catagaggaa ctcctcgagc agcgcgccgc
      541 cgatcccctg tgcgcagccg ccgacgatct gcccctcgat cagcatcgga ttgaccgcct
      601 tgccgacatc gtaggcgatg aggaagcgct cgatgtcgac agcgccggtt tccgcgtcga
      661 cgcgcgtcac ggcgatgtgc acgccatagg gatagttcat gtggttcgag gtgaaggagc
      721 cctccgccgt cagtccgagg ggatgctcgg cgccgagctt cgagccgcgg ccgagcgcgc
      781 gggcgatcgc ggcaagaccg atcgacggac cggcgccgga gtcggtgcgc accacctcgc
      841 catcgaccac atcgagcacg gcggccggcg cctgcagcag ttcggcggcg gcctcgatcg
      901 ccttcgttct gagcgcggcc gcagcgatcc gcgttgcttc cccggtcatg acggttacgc
      961 gggaggcgaa tgcgcccatg ccgcgctcga tgcgattggt ttggccgtgg acgacacgga
     1021 ccctatgaca gtcgacgccg agcgcatcgg cgcagatctg cgcgagcacg gtctccatgc
     1081 cttggccgac cgacgcggag ccggacacca cttcgaccgt cccttgctca tcgacgctga
     1141 tccgcacctc gtcgatggga ccgagcccgc ttttctccac gaacagggcg acaccggcgc
     1201 cgacgagttc cccggcggcg cggcgctgag cgagtttttc gcggagccgc ggccattcaa
     1261 ccgccgcgag cgccttgtcg agcagcccgg cataatcacc ggaatcgagc acgatcccgg
     1321 tgccgagcgt atcgagcgga cgcgcgtagg gcatttcctg cagcgcgatc aggttgcgcc
     1381 ggcgcacttc gatgcgatcc aaccgcaaac gcgcggcgat cgcatcgagc aggcgctcgc
     1441 gcacaaacgt gctctcaaag cggccgggcg cgcggtaggt tccgcacggc gtcttgttgg
     1501 tcagccgaat gtgcacgtcg gcgcgatagg ccggaacgcg gtacgggccg ggcagcatcg
     1561 ccgccgtgag atcgggaaca gtcgccgcgt gggtgcgcat gtaggcgccc tggtcgtgga
     1621 agatctcgtc ctcgatcgcg agaatgcggc cgtcgcgatc gacggcggcg cgaacgtggt
     1681 gacactgctg gcgcgaatgg tttgcggcga tcaggtgctc gcggcgatcc tcgatccact
     1741 tgaccggccg gcgcaggcgc atcgccgcgg cgcacaccag cacgtcttcg ggataaagtt
     1801 cgccgcggac accgaaaccg ccgccgacat ggccctcgta gaggtgcacc gacgagagtg
     1861 cgcgcccgaa catgcgggca atctgggcgc ggttccaatg cggcaccttg gcggcgccat
     1921 gaagctcgag catgtcgtcg gccgcgtcgt agcgcgcaat ggcgccgcgg gtctcgatcg
     1981 ggacggccga atgccgtccg atcgagagcg tcgcctcgac cacggcgtga gcggagcgga
     2041 aggcggcgtc gatatcgccg taacccttgc gcacgatggc gggctcggtc gagcggccgg
     2101 gttcaaactc gccgggctca gcgtcggcgc gaaggagcgg cggcagttcc tcgacgtcga
     2161 gcacgacgag ctcggccgca tcctcggcga gatagggatc gtcggcgaac accgccgcga
     2221 ccggctcgcc gacgtagcgc accgtgccgg tcgcgaacag ccgctgccgg tagggctcca
     2281 ggcattcgat ccgggtcagg cggaagtcga tcggcggaat gtcggcagtg tccgcggccg
     2341 tccacactgc gtggacgccc gctttcgcca gcgccgcgct cgggtcgatc gagcggatgc
     2401 ggccgtgcgc gaaattcgag cgcacgacgc gcatgtgtag ttgccgcgga aacgaaatgt
     2461 cggcggcaaa gcggccacgt ccggtcagca gcgggcgatc ctcgagccgc ggcaccgacc
     2521 ggccgacaaa tttttccttc ggctttgcgt cgggcggagc catcgggctt cctgacctgg
     2581 cgggctttgt gtgggcttca gcggcgcatc tgcgcggcgg ccgcgcgtac cgccttcacg
     2641 atgctctgat agccggtgca gcggcacaga ttggacgaga gcacgtcgac gaggtcgtca
     2701 tcgctgatgt ccggctcgcg ttccagcacg ccggtgacca gcatgagaaa gcctggtgtg
     2761 cagaagccgc actgcaggcc gtgatgctcc atgaacgcgc gctgcaacgg gttgaggtcg
     2821 tcgccgttgg ccagcccctc cacggtgcgg atctctctgc catcggcctg caccgccagc
     2881 atcaggcatg agcgcaccgg ctcgccatca accagcacgg tgcaggcgcc gcacacgcca
     2941 tgctcgcaac cgatatgggt gccggtctgc ccgcaatcct cgcggatcgc atcgaccagc
     3001 gtgcggcgcg gctcgacccg gatcgcgtgc gcgtgcccgt tgatcgtcag cgtgatgtcg
     3061 cttcgctcgc tcatcgaggt ttcttcgttg cctgccgcag agcggcacgg atgcggcgcg
     3121 gtgtcgccgg gatttcctcg atggtcacgc cgaacggcgc gagcgcgtca ttgacggcgt
     3181 tgagcaccgc cgccggcgcg ccgatggcgc cgccctcgcc cagccccttg gcctgcgtga
     3241 cggtcgttcc gtcgagcgtt tccaggtgca gcaactcgat cggtggcatc tcacggctcg
     3301 tcggcggcag aaaa
//
LOCUS       DATMQB010000363         2970 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2322945, whole genome shotgun sequence.
ACCESSION   DATMQB010000363 DATMQB010000000
VERSION     DATMQB010000363.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2970
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2322945"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..456
                     /locus_tag="VNY79_10420"
     CDS             <1..456
                     /locus_tag="VNY79_10420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-ubiquinone oxidoreductase-F iron-sulfur
                     binding region domain-containing protein"
                     /protein_id="HWX72906.1"
                     /translation="GGGTRSGRPVRAVQVGGPLGAYFPRALFDTPFDYEAFAARDGLI
                     GHGGIVVFDDTVDMAKQARFAMEFCAIESCGKCTPCRVGSTRGMEVIDRIIGGENRAA
                     NVALLEDLCHTLKFGSLCALGGFTPYPVMSALTHFPEDFAAPPRLQAAE"
     gene            467..>2970
                     /gene="fdhF"
                     /locus_tag="VNY79_10425"
     CDS             467..>2970
                     /gene="fdhF"
                     /locus_tag="VNY79_10425"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007593363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009326 - formate dehydrogenase complex
                     [Evidence IEA];
                     GO_function: GO:0008863 - formate dehydrogenase (NAD+)
                     activity [Evidence IEA];
                     GO_process: GO:0015942 - formate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HWX72907.1"
                     /translation="MSSVEQSPVQHSLVREIDYGTPPAKTEKSVTLSIDGRQVSVPEG
                     TSIMRAAMETGIEIPKLCATDMLDAFGSCRLCLVEIDGRGGTPASCTTPVAEGMVVHT
                     KSERLDRIRKGVMELYVSDHSVDSLDRSKYADVDLLDTAAEVGLEEVRYGFAGARHRN
                     PGIDDSNPYFTFDPAKCIVCSRCVRACEEVQGTFALTISGRGFDSIVAAGMDEKFIES
                     ECVSCGACVQACPTGSLREKTVIDQGKPEWSALTTCAYCGVGCAFKVEMRGDEVVRMV
                     PYKDGKANRGHSCVKGRFAWGYANHRERILKPMVRDQISEPWREVSWEDAIGRVASEF
                     KRIQTKYGRGSIGGITSSRCTDEETFLVQKLVRAAFGNNNVDTCARVCHSPTGYGLKT
                     TFGTSAGTQDFDSVEDTDVAVIIGANPTDAHPVFASRLKKRVRQGAKLIIIDPRRIDL
                     VRMPHVEAAYHLPLLPGTNVAMLTALAHVVVTEGLVDEKFVRERCEWDAFQDWAAFVA
                     EERNSPEAVAKITGVPAATIRAAARLYATGGNGAIYYGLGITEHSQGSTAVIAIANLA
                     MATGNIGRPGVGVNPLRGQNNVQGSCDMGSFPHELSGYRHIADDATRAMFEALWQRPL
                     DAEPGLRINNMLDAACDGRFKAVYIQGEDILQSDPNTHHVAAGLAAMECVVVQDLFLN
                     ETANYAHVFLPGSTFLEKDGTFINAERRIQLVNKVMEPKAGYADWEITCLISEAMGYP
                     MRYNHPSEIMDEIARLTPTFAGVSFERIAELGSIQWPCNDKAPEGTPVMHINGFVRGK
                     GKFVVTEYIATDEKTGPRYPLLLTTGRILSQYNVGA"
BASE COUNT          531 a         1010 c          936 g          493 t
ORIGIN      
        1 ggcggcggaa cgcgcagcgg ccgcccggtg cgggcggtgc aggtcggcgg tccgctcggc
       61 gcctatttcc cgcgcgcgct gttcgacacg cccttcgact acgaggcctt tgccgcgcgc
      121 gacggcctga tcggccatgg cggcatcgtg gtgttcgacg ataccgtcga catggccaaa
      181 caggcccggt tcgccatgga gttctgcgcc atcgagtcgt gcggcaaatg tacgccgtgc
      241 cgcgtcggct cgacacgcgg catggaggtc atcgaccgca tcatcggcgg cgagaatcgt
      301 gccgccaacg tcgcgttgct cgaagacctt tgtcatacgc tgaagttcgg gtcgctgtgc
      361 gcgctcggcg gttttacgcc gtatccggtg atgagcgcgc tgacccattt ccccgaagat
      421 tttgcggcgc cgccgcgcct gcaagccgcc gaataggaga cgcgtcatgt cgtccgtgga
      481 acaatcgccc gttcaacact cgctcgtccg cgagatcgac tacggaaccc cgcccgcgaa
      541 gacggagaag tcggtcacgc tttcgatcga cggcaggcag gtgtcggtgc ccgaaggcac
      601 ctcgatcatg cgcgcggcaa tggagaccgg catcgaaatc ccgaagcttt gcgcgaccga
      661 catgctcgac gccttcggct cctgccggct ctgcctggtc gagatcgacg gccgtggcgg
      721 aacgcccgcg tcctgcacca cgccggtcgc cgagggcatg gtggtgcata ccaagagcga
      781 acgcctcgac cgcatccgca agggcgtcat ggagctttac gtctccgacc actcggtgga
      841 ttcgctcgac cgcagcaaat atgccgacgt cgacctgctc gacaccgcgg ccgaagtcgg
      901 cctcgaggag gtccgctacg gctttgccgg cgcccgccac cgcaatcccg gcatcgacga
      961 ttccaatccc tatttcacgt tcgatccggc caagtgcatc gtgtgctcgc gttgcgtacg
     1021 cgcctgcgag gaggtgcaag gcaccttcgc gctcacgatc tcgggccgcg gcttcgattc
     1081 gatcgttgcc gccggcatgg atgagaagtt catcgaatcc gagtgcgtct cctgcggggc
     1141 ctgcgtgcaa gcctgcccaa ccggctcact gcgcgagaag acggtgatcg atcagggcaa
     1201 gccggaatgg tcggcgctca ccacctgcgc ctattgcggg gtcggctgcg ccttcaaggt
     1261 ggaaatgcgc ggcgatgagg tcgtgcgcat ggtgccgtac aaggacggca aggcgaaccg
     1321 cggccattcc tgcgtgaagg gtcgcttcgc ctggggctac gccaatcacc gcgaacgcat
     1381 cctcaagccg atggtccgcg accagatcag cgagccgtgg cgcgaagtat cctgggagga
     1441 cgcgatcggc cgcgtcgcct ccgagttcaa gcgcatccag acaaaatacg gacgcggctc
     1501 gatcggcggc atcacctcct cgcgttgcac ggacgaagaa accttcctgg tgcagaagct
     1561 cgtgcgcgcc gccttcggca acaacaatgt cgatacctgc gcgcgcgtgt gccattcgcc
     1621 gaccggctat ggcctcaaga ccaccttcgg aacctcggct ggaacgcagg atttcgattc
     1681 cgtcgaagac accgacgttg cggtcatcat cggcgccaat ccgaccgacg cccatccggt
     1741 cttcgcctca cgcctgaaga agcgcgtgcg ccagggcgcc aagctcatca tcatcgatcc
     1801 gcggcggatc gatctcgtgc gcatgccgca cgtggaagcg gcgtatcact tgccgctcct
     1861 gcccggcacc aacgtcgcca tgctgaccgc cctcgcccac gtcgtggtga ccgaaggcct
     1921 ggtcgacgag aagttcgtcc gcgagcgttg cgaatgggac gctttccagg actgggcggc
     1981 gttcgtcgcc gaggaacgca acagtcccga ggcggtcgcc aagatcaccg gggttccggc
     2041 cgcgacgatc cgcgctgcgg cgcggctcta cgccaccggc ggcaacggcg cgatttatta
     2101 cggcctcggc atcactgagc acagccaggg ttcgaccgcg gtcatagcca tcgccaacct
     2161 cgctatggcg accggaaaca tcggccggcc tggcgtcggc gtgaacccgc tgcgcgggca
     2221 gaacaacgtc cagggctcgt gcgacatggg ctcattcccg cacgaactgt cgggctaccg
     2281 gcacatcgcc gacgacgcca cgcgcgccat gttcgaggcg ctgtggcaga ggccgctcga
     2341 cgccgagccc ggcctgcgca tcaacaacat gctcgacgcc gcctgcgacg ggcggttcaa
     2401 ggcggtctac atccagggcg aggacatcct gcagtccgac cccaacacgc accatgtcgc
     2461 cgccggtctc gcggcgatgg aatgcgtcgt ggtgcaggac ctgttcctga acgagacggc
     2521 gaactacgcg cacgttttcc tgccgggctc gaccttcctg gaaaaggacg ggaccttcat
     2581 caatgccgag cgccgcatcc agctcgtgaa caaggtcatg gagcccaagg ccggctatgc
     2641 cgactgggag atcacctgcc tgatcagcga ggccatgggc tatccgatgc gatacaatca
     2701 tccctccgag atcatggacg agatcgcccg gctgacgccg acgttcgcgg gcgtatcgtt
     2761 tgagcgcatc gccgagctcg gctcgatcca gtggccgtgc aacgacaagg cgccggaagg
     2821 gacgccggtc atgcacatca acggcttcgt ccgcggcaag ggcaagttcg tcgtcaccga
     2881 atacatcgcg accgacgaga agaccggccc gcgctatccg ctccttctca ccaccggccg
     2941 cattctcagc cagtacaatg tcggcgcgca
//
LOCUS       DATMQB010000364         2638 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2323487, whole genome shotgun sequence.
ACCESSION   DATMQB010000364 DATMQB010000000
VERSION     DATMQB010000364.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2638)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2638)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2638
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2323487"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..223)
                     /locus_tag="VNY79_10430"
     CDS             complement(<1..223)
                     /locus_tag="VNY79_10430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72908.1"
                     /translation="MKFTFSWLKEHLDTDRSLGEIVDKLTMVGLEVERVEDKAKLLAP
                     FVIARVVEAKQHPNADRLRVCMVDTGGGDP"
     gene            complement(372..1454)
                     /gene="pheS"
                     /locus_tag="VNY79_10435"
     CDS             complement(372..1454)
                     /gene="pheS"
                     /locus_tag="VNY79_10435"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009328 - phenylalanine-tRNA ligase
                     complex [Evidence IEA];
                     GO_function: GO:0004826 - phenylalanine-tRNA ligase
                     activity [Evidence IEA];
                     GO_process: GO:0006432 - phenylalanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HWX72909.1"
                     /translation="MPDAAQLEQQILADAAAAPDEPALEAVRVAALGKAGSVTALLKT
                     LGTLTPEERKTQGPLINGLKDRVNAALLARREALKGEALAARLNTESVDVTLPVREAA
                     AEIGRVHPLTQVFDEVTTTFADMGFAVAEGPDIETDDNNFTKLNFPADHPARDMQDTF
                     FFHPKPDGSRLLLRTHTSPVQVRTMLSQKPPIRIICPGRTYRSDSDQTHTPMFHQVEG
                     LVVDRGSHLGHLKWILQEFCKAFFEVDQVKMRFRPSFFPFTEPSLEVDIQCRRDKGEV
                     RFGEGDDWMEILGCGMVHPHVLRNCGIDPDEFQGFAWGMGIDRIAMLKYGMPDLRAFF
                     EADVRWLSHYGFRPLDVPTLAGGLSS"
     gene            complement(1463..1963)
                     /locus_tag="VNY79_10440"
     CDS             complement(1463..1963)
                     /locus_tag="VNY79_10440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013216809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DinB family protein"
                     /protein_id="HWX72910.1"
                     /translation="MIDRAYVQRMARYNRWQNESVYGVADRLSDEERRRERGAFFGSI
                     HKTLSHLLWADHIQMSRFANMPRPEAGIPESVSLFPDWDALKEERARFDGAIIGWADA
                     VDPSWLAGDYTYYSGATKRELTKPCWVLVTHMFNHQTHHRGQVHCLLTQAGGQPSDTD
                     LPFMPE"
     gene            complement(2033..2392)
                     /gene="rplT"
                     /locus_tag="VNY79_10445"
     CDS             complement(2033..2392)
                     /gene="rplT"
                     /locus_tag="VNY79_10445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HWX72911.1"
                     /translation="MARVKRGVTAHAKHKKVLKAAKGYYGRRKNTIRVAKQAVEKANQ
                     YAYRDRKRRKRTFRALWIQRLNAAVRPFGLNYSRFVAGLGKAGIVIDRKVLSDLAISE
                     PAAFEAIVGKAKSALAV"
     gene            complement(2463..>2638)
                     /gene="rpmI"
                     /locus_tag="VNY79_10450"
     CDS             complement(2463..>2638)
                     /gene="rpmI"
                     /locus_tag="VNY79_10450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HWX72912.1"
                     /translation="AKKRFKVTGGGKVLYQQSRKRHGMIKRTKKQIRQLRGTNVLFKT
                     DGDKIKKFFLPNG"
BASE COUNT          442 a          837 c          865 g          494 t
ORIGIN      
        1 tcggatcgcc gccgccggta tccaccatgc agacgcgcaa ccggtcggca ttgggatgct
       61 gtttggcctc gaccacgcgc gcaatgacga acggcgccaa gagcttcgcc ttgtcctcga
      121 cgcgctcgac ctcgagcccg accatggtga gcttgtccac gatctcgccg agcgagcggt
      181 cggtgtcgag atgctccttg agccagctga aggtaaattt catcatggga gaaggcccct
      241 gccgtctccg cacaattcac cgtcatgccc gggcgcgacc cgggcatcca tgcggcatcg
      301 aagcctgccg caagtcagca tagatcgccg ggtcgagccc ggtgatgacg acggcagttg
      361 cgggggggtg ctcacgaact caatccgccc gccagcgtcg ggacgtcgag cgggcgaaag
      421 ccgtaatggg agagccagcg gacatcggcc tcgaagaagg cgcgtaggtc cggcatgccg
      481 tatttgagca tggcgatgcg gtcgataccc atgccccagg caaaaccctg gaattcgtcg
      541 ggatcgatgc cgcaattcct cagcacgtgg ggatgcacca tgccgcagcc gagaatctcc
      601 atccagtcgt cgccttcgcc gaagcggact tcgcccttgt cgcgccggca ctggatgtcg
      661 acctcgagcg acggctcggt gaacggaaaa aaggaaggac gaaagcgcat cttgacctga
      721 tcgacctcga agaacgcctt gcagaactcc tgcaggatcc atttcaggtg gccgagatgc
      781 gagccgcggt cgacgaccag gccctcgacc tggtgaaaca tcggcgtgtg cgtctggtcg
      841 ctgtcgctgc gataggtgcg gcccggacag atgatgcgga tcggcggctt ctggctcagc
      901 atggtgcgca cctgcaccgg cgaggtgtgc gtgcgcaaga ggagccgcga gccgtccggc
      961 ttcggatgaa agaagaacgt gtcctgcatg tcgcgggccg gatgatccgc ggggaaattg
     1021 agcttggtga agttgttgtc gtcggtctcg atgtccggtc cctcggcgac ggcaaagccc
     1081 atgtcggcga aggtggtggt cacttcgtcg aatacctggg tgagcgggtg cacgcggccg
     1141 atctcggctg ccgcctcgcg caccggcagc gtcacatcga cgctttccgt gttgagccgc
     1201 gccgccagcg cctcgccctt gagcgcctca cgccgcgcca gcagcgcggc gttgacccga
     1261 tctttcaatc cgttgatcag cggcccctgc gtcttgcgtt cttcgggcgt caacgtgccg
     1321 agcgtcttca agagcgccgt gaccgagccg gccttgccaa gcgcggcgac gcgcaccgct
     1381 tcgagcgccg gctcgtcagg cgcagcggcg gcatcggcga gaatttgttg ttcgagttgt
     1441 gcggcgtcag gcatttcgac cgtcactccg gcatgaacgg cagatcggtg tcggacggct
     1501 ggccgccggc ctgcgtcagc aggcaatgga cctggccgcg atgatgggtc tggtgattga
     1561 acatatgggt gaccagcacc cagcagggct tggtcaactc gcgtttcgtc gcgcccgaat
     1621 agtaggtgta atccccggcg agccacgacg ggtcgacggc atcggcccag ccgatgatcg
     1681 cgccatcgaa gcgcgcgcgc tcctccttca aggcgtccca gtcaggaaag agcgagaccg
     1741 attccggaat gccggcctcc ggcctcggca tattggcgaa tcggctcatc tggatgtggt
     1801 cggcccatag cagatggctg agcgtcttgt ggatcgagcc gaagaaggcg ccgcgctcgc
     1861 gccgccgctc ctcgtcgctc agccggtcgg cgacgccgta gacgctctcg ttctgccagc
     1921 ggttatagcg cgccatgcgc tggacgtagg cgcgatcaat cattgcacga gcacttttgc
     1981 gcgcgacgga tcatgacgct gccacttgac gctgccaatt ggcgccggcg cttcacaccg
     2041 ccagcgccga ttttgccttg ccaacgatcg cctcgaacgc cgcgggctcg ctaatcgcga
     2101 ggtccgaaag caccttgcgg tcgatcacga tgccggcctt gccgaggccg gcgacgaacc
     2161 ggctgtaatt gaggccgaac gggcgaaccg ccgcattgag ccgctggatc cagagcgcgc
     2221 ggaaggtgcg cttcctgcgc ttgcggtcgc ggtaggcgta ctggttcgcc ttttccaccg
     2281 cctgcttggc gacacggatc gtgttcttgc gccttccgta gtagcccttg gcggccttga
     2341 gcaccttctt gtgcttggca tgagcggtga ctccgcgctt gacgcgtgcc atgactgatc
     2401 tcctctcgaa tcgcgaaacg gtgattggat agcggcccgc gcgcagcggg ccggccgagc
     2461 ggtcagccgt tcggcagaaa gaacttcttg atcttgtcgc cgtcggtctt gaacagcacg
     2521 ttggtgccgc ggagctggcg gatctgcttt ttcgtgcgct tgatcatgcc gtggcgcttg
     2581 cgcgactgct ggtagaggac cttgccgcca cccgtcacct tgaagcgctt cttggcgc
//
LOCUS       DATMQB010000365         7923 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1404806, whole genome shotgun sequence.
ACCESSION   DATMQB010000365 DATMQB010000000
VERSION     DATMQB010000365.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7923)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7923)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7923
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1404806"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..201)
                     /locus_tag="VNY79_10455"
     CDS             complement(<1..201)
                     /locus_tag="VNY79_10455"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HWX72913.1"
                     /translation="MHSNTVSLFRPPAPTPQARALGPLALLKTLRTNPLECWTRAHFE
                     QPIVLGGFPFARVALISDPAAIR"
     gene            complement(594..1355)
                     /locus_tag="VNY79_10460"
     CDS             complement(594..1355)
                     /locus_tag="VNY79_10460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0043461 - proton-transporting ATP synthase
                     complex assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP12 family protein"
                     /protein_id="HWX72914.1"
                     /translation="MSDGNDGHRPDSAAEAVRRATRPAPRRRFYATAAIASVAGGHAV
                     QLDGKPVRTPAGRVLAAPTAALALALAAEWDAQRDVIDPPRMPLTRLANAIIDGVSDR
                     PDAVAAEIENYLGSDLVCYRASSPPGLVTRQAQHWDPILAWARDVLGAPLRAEVGVVH
                     IAQDEDALARARATIPRDPWRLGALSVATTLAGSALIALALARGRLSVEKAWEAAHVD
                     EDWNMEQWGRDALALERRAFRFAEFEAAATVLHLL"
     gene            1716..3506
                     /locus_tag="VNY79_10465"
     CDS             1716..3506
                     /locus_tag="VNY79_10465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HWX72915.1"
                     /translation="MNPTDISVPDYFHKVVDCQWACPAHTPVPEYIRLIAAGRYSDAY
                     MINWESNVFPGVLGRTCDRPCEPACRRGRVEKEPVAICRLKRVAADFKDDIRDRLPKP
                     AATKNGKRIALVGGGPASLTVARNLAPMGYECVVFDQDPLSGGMMRTQIPKFRLPEKV
                     LDEECHYILDLGVAFAGGKRIDSMRALLAEDFDAVFVGCGAPRGRDLDIPGRKEAAKN
                     VHIGIDWLSSVSFGHIDRIGRRVIVLGGGNTAMDCCRSSRRLGGEDVKVVVRSGFEEM
                     KASPWEKEDAMHEDIPIFNYLVPKEFTHDNGKLTGVTFEKVKAVRDAKGRRDLVPSGE
                     PDQHFPCDDVLVAVGQENAFPWIERDCGIDFDKWDMPKVDPKTMASSHPKVFFGGDAA
                     FGPKNIIWAVAHGHEAAISIDRMCRGEDVNIRPAPQVAVLSQKMGIHEWSYDNEITLD
                     RRYRVPHREKVVALRDIKAEVELGYDLELALKEADRCLNCDVQTVFTGQLCIECDACV
                     DICPMDCITFTANGEEADLRSRLQAPANNLSQDLYIGNSLKTGRIMVKDEDVCLHCGL
                     CAERCPTGAWDMQKYLIDMTHAEQACRSKA"
     gene            3488..5329
                     /locus_tag="VNY79_10470"
     CDS             3488..5329
                     /locus_tag="VNY79_10470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:acceptor oxidoreductase subunit alpha"
                     /protein_id="HWX72916.1"
                     /translation="MPIESVNDFVVRFANVNGSGSASANELFARAVLRMGIPVAPRNI
                     FPSNIQGLPTWYEVRISEAGHLGARGGTDLMVAMNPQTWEQDVKGIEPGGYLLYDSTK
                     PLPKSKFRDDITVIGVPLTAICNREYTDPRQRQLFKNIIYVGALSALIDMDVPEIERL
                     IAEQYKGKEKLFDANKHALHLGRDWVMMNLDCPIGLRLKRANAVGERIFIEGNSAAAL
                     GAVYGGATVCAWYPITPSSSLAEAFTGHCNRLRVDVQTKRKKFAIIQAEDELASIGIV
                     IGAAWNGARAFTATSGPGISLMQEFLGLAYFAEIPAVIFDVQRAGPSTGMPTRTQQTD
                     ILSCAYASHGDTKHVLLFPEDPAEAFEFGAAAFDLADRLQTPVFVMLDLDIGMNHRLA
                     RPLTWDDTRRFDRGKVMTAAALEAGKEFGRYLDVDGDGIPYRTLPGTHPSKGSFFTRG
                     TSRDRYARYTEDGTAYADNMQRLLRKFETAKDLVPRPLQANAGKPTKYGVLYFGSTSP
                     PMDEAIELLESEGHVLDRLRVRAFPFHSSVTSFIGEHDFVFVVEQNRDSQLRSLIVNE
                     CSIDPVRLVPILHYDGTPITARFIARAIADHLDALKVTPLRKGKVVS"
     gene            complement(5345..6436)
                     /locus_tag="VNY79_10475"
     CDS             complement(5345..6436)
                     /locus_tag="VNY79_10475"
                     /inference="COORDINATES: protein motif:HMM:NF015983.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HWX72917.1"
                     /translation="MNPAVVVRHGRNLLSVMEINANRLIGREMVPMRTDILAIEPTSA
                     CNLKCSFCAYVKKDSPKISMKNDRFADYVGQAVAMGYRRFHLTPNTGDIFMDRRIFDK
                     LAFLEEHPEVEEYQFYTNFTILDSDDIARLVTLKKLKYMTISIYGHDRDSFVRIAQAT
                     GKVYQRLLTNLETMLTVIDRRAGVLNVAIRSTRDMPRTPDTDLLKLLERYKAAGISVK
                     RSQLYHSWGGKITPEDLKGLAIDVMDSSKIYKNGACSLLFTGVQIMATGLVHACACVD
                     VNASLTIGDLNERPLRDILSSRNPLYMGLIEEQQNGQFRDVCRECGFYKSIYHSRSQD
                     RKEQIPIRSIAEFKTALDAKSEAAALAGG"
     gene            6625..7680
                     /locus_tag="VNY79_10480"
     CDS             6625..7680
                     /locus_tag="VNY79_10480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015664952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoacid:ferredoxin oxidoreductase subunit
                     beta"
                     /protein_id="HWX72918.1"
                     /translation="MTYVVKPKFHHPALPKNTLGFTHRDYEGAVSTLCAGCGHDSISA
                     SIIEACFELSIEPHRVAKLSGIGCSSKTPTYFLGNSHGFNSVHGRMPSVLTGANLANR
                     DLIYLGVSGDGDSASIGFGQFAHAIRRGVNMVYIVENNGVYGLTKGQFSATADRGSKS
                     KRGLINNDSAIDLVAIALQVGATFVGRSFSGDKAQLRPLIKAAIEHRGAAFLDVISPC
                     VAFNNHAGSTKSFDYVREHNEAVNRLDFITGRATIKVDYAPGSVEVVEQHDGTTLALR
                     KIDSEYDVHDRVAAMSFLQDHAAKGQIVTGLLYVAPESEDLHGHLNTVDAPLNTLGER
                     ELCPGSAALDKINASLR"
BASE COUNT         1449 a         2638 c         2471 g         1365 t
ORIGIN      
        1 acggatcgcc gctggatcac tgatgagcgc aacgcgcgcg aacggaaatc cgccgagcac
       61 gatcggctgt tcgaaatgag ccctggtcca gcactcgagc gggttggtcc gcaacgtctt
      121 caggagggcc agcggaccga gtgcccgtgc ttgcggtgtc ggcgccggag gccgaaaaag
      181 ggaaacggta ttggaatgca tgttcggcgg ccttcaaaac atacgcatcg cccaaatgtt
      241 tgccgcccaa atattgcagc gatgttaacc cccagacacc ctccccgttc cggcggccgg
      301 ccatgcacaa tgtttgccgg tttcgcccgc aatgcgaaat cgcgcaaaag tggtgtgtta
      361 attgatccta gacaaagcga cgcgtggagc gagcacgggc ttaaccctgg caaaactcag
      421 gccagcgcgg ctgcagcgtc ggcgcctcga cgaggcaaag ccggtgcctg ccgcgcgttc
      481 acctcgctcg aactggctgt gtctgccgcg cgtcatgatc gggaaaagtt agaccttcct
      541 ggagcgggat gtgcgccgcg atcgctcgcg ggtctcgccg ccttcgatcc gggctaaaga
      601 aggtgcagca ccgttgccgc ggcttcgaat tcggcgaaac ggaaggcgcg gcgttcgagc
      661 gcgagcgcat cacggcccca ttgctccata ttccagtcct cgtcgacgtg cgccgcctcc
      721 caggctttct cgaccgacag gcgtccccgc gccaaggcga gagcaatgag cgccgagccg
      781 gcgagcgtcg tcgccacgct gagcgccccg aggcgccagg ggtcgcgggg aatggtggcg
      841 cgggcgcggg cgagcgcgtc ttcatcctgg gcaatgtgaa cgacacccac ttccgcgcgc
      901 aacggtgcgc caagcacgtc gcgtgcccag gcaaggatgg ggtcccaatg ctgcgcctgc
      961 cgtgtgacga gccccggcgg agaactggcg cgatagcaaa caagatcgga gccaagatag
     1021 ttttcgatct ccgccgctac cgcgtctggt cgatcgctga cgccgtcgat gatcgcattg
     1081 gcgagccggg tcagcggcat ccgcggcgga tcgatcacgt ctcgctgcgc gtcccattcg
     1141 gcggcgagcg ccagcgccag cgcggcggtc ggcgcggcga ggacgcggcc cgcaggggtg
     1201 cgcaccggtt tgccgtcgag ctgcacggca tggccgccgg ccaccgacgc gatcgcggcc
     1261 gtggcgtaga aacgccggcg tggcgccggc cgcgtggcgc ggcgcactgc ctcggcggcg
     1321 ctgtcgggtc tgtgaccatc gttcccgtca gacataggat tttagaccct ggggcggagc
     1381 gccatggccg gttgccctgc cccgcctgcg gcgctgccgc atcgccgcgc tgtcataaaa
     1441 ttgtcaacat atccaacgat ttgcgcgggg cctccggaag cggcgtaagg aggaggaacg
     1501 ggcgcgacct ttttgcgccg cagcgctcgc ttccattaag gaggcatcta cgacaatacc
     1561 tcgttatatc aacgagaagc ggtggaaatc cgcaccaccc tcgactagta tccgcgccgg
     1621 attcggccac agaacgatcc gcgggggcag ccgatccgcg cagcgaagtc agtaccgccg
     1681 aaacaacggc gtgacgctgt gcgcatgagg agtcaatgaa cccaaccgac atttcggtcc
     1741 cggactactt ccacaaggtc gtggactgtc aatgggcctg cccggcgcac acgccggtgc
     1801 cggaatacat ccgtttgatc gccgccggcc gctacagcga cgcctacatg atcaactggg
     1861 aatcgaacgt attcccgggc gtgctcggtc gcacctgcga ccgcccgtgc gagccggcgt
     1921 gccggcgcgg ccgtgtcgag aaagaaccag ttgcgatctg ccggctcaag cgcgtcgccg
     1981 ccgacttcaa ggatgacatc cgcgaccgcc tgcccaagcc ggccgcgacc aaaaacggca
     2041 agcgcattgc gcttgtgggc ggcggcccag cctcgctcac cgtggcgcgc aaccttgcgc
     2101 cgatgggcta cgagtgcgtg gtgttcgacc aggacccgct ttccggcggc atgatgcgca
     2161 cgcagattcc gaaattccgc ctgccggaaa aggtgctcga cgaggaatgc cactacatcc
     2221 tcgacctcgg cgtcgcgttc gccggcggca agcgcatcga cagcatgagg gcgttgctgg
     2281 cggaagactt tgacgccgtc tttgtcggct gcggtgcacc gcgcggccgc gacctcgaca
     2341 ttcccggccg caaggaagcg gccaagaacg tccacatcgg catcgactgg ctctccagcg
     2401 tctccttcgg gcatatcgac cgcatcggca ggcgcgtcat cgtgctcggc ggcggcaaca
     2461 ccgcgatgga ctgctgccgt tcctcgcgcc ggctcggcgg cgaggacgta aaggtggtgg
     2521 ttcgctccgg cttcgaggag atgaaggcgt ccccctggga gaaggaggac gccatgcacg
     2581 aagacatccc gatcttcaat tatctggtgc cgaaggagtt cacgcacgac aacggcaagc
     2641 tcaccggcgt gaccttcgag aaggtcaagg cggtgcgcga cgccaagggg cggcgcgacc
     2701 tggtgccgag cggcgagccc gaccagcact tcccctgcga tgatgttctg gtcgccgtcg
     2761 gccaggagaa cgcgttcccg tggatcgagc gcgattgcgg catcgacttc gacaagtggg
     2821 acatgcccaa ggtcgatccc aagacgatgg catcgagcca ccccaaggtg ttcttcggcg
     2881 gcgatgccgc cttcggtccg aagaacatca tctgggcggt cgcgcacggc cacgaagctg
     2941 cgatctcgat cgaccgcatg tgccgaggtg aggacgtcaa tatccgcccg gcgccgcagg
     3001 ttgcggtact gagccagaag atgggcatcc acgagtggag ctacgacaac gagataacgc
     3061 tcgaccggcg ttaccgggtg ccgcatcgcg aaaaggtggt ggcgctgcgc gacatcaagg
     3121 ccgaggtcga gctcggctat gacctcgaac tggcgttgaa ggaagccgac cgctgcctca
     3181 attgcgacgt gcagacggtc ttcaccggcc agctgtgcat cgagtgcgac gcctgcgtcg
     3241 acatctgccc gatggactgc atcaccttca ccgcgaacgg cgaggaagcg gacctgcgct
     3301 cgcggctgca ggcgccggcg aacaacctca gccaggacct ctacatcggc aacagcctca
     3361 agaccggccg gatcatggtc aaggacgagg atgtatgcct gcattgcggg ctctgtgcgg
     3421 agcgctgccc caccggcgcg tgggacatgc agaagtacct catcgatatg actcacgcag
     3481 aacaagcatg ccgatcgaaa gcgtaaacga cttcgtcgtc cggttcgcca acgtcaacgg
     3541 ctccggctct gccagcgcca acgagctgtt cgcccgcgcg gtgctgcgca tgggcattcc
     3601 ggtcgccccg cgcaacatct tcccctcgaa catccagggg ctgccgacct ggtacgaggt
     3661 gcggatctcg gaagccggcc atctcggcgc ccgcggcggc accgacctca tggtcgccat
     3721 gaacccgcag acctgggaac aggacgtcaa gggcatcgag cccggcgggt atctgctcta
     3781 cgattcgacc aagccgctgc cgaagtcgaa attccgcgac gacatcaccg tcatcggcgt
     3841 gccgctcacc gccatctgca atcgcgaata caccgacccg cgccagcgcc aattgttcaa
     3901 gaacatcatc tatgtcggag cgctgtccgc gctcatcgac atggacgttc cggaaatcga
     3961 gaggctcatc gccgagcagt acaagggcaa ggagaagctg ttcgacgcca acaagcacgc
     4021 gctgcatctc ggccgcgact gggtgatgat gaacctcgat tgcccgatcg ggctgcggct
     4081 gaagcgcgcc aacgccgtcg gcgagcgcat cttcatcgaa ggcaattcgg ccgctgcgct
     4141 cggcgccgtc tatggcggcg cgacggtctg cgcctggtat ccgatcacgc cgtcgtcctc
     4201 actcgcagag gcgttcaccg ggcattgcaa ccgtctgcgc gtcgatgtgc agaccaagag
     4261 gaagaagttc gcgatcatcc aggccgagga cgaactggcc tcgatcggca tcgtcatcgg
     4321 cgctgcctgg aacggcgccc gcgcgttcac cgcgacctcc ggcccgggaa tttcgctgat
     4381 gcaggaattc ctcggccttg cctatttcgc cgagattcct gccgtgatct tcgatgtgca
     4441 gcgggccggt ccttcgaccg gcatgccgac gcgcacgcag cagaccgaca tcctctcctg
     4501 cgcctacgcc tcccacggcg acaccaagca cgtgctgctg ttccccgagg acccggcgga
     4561 ggcgttcgag ttcggcgcgg cggctttcga cctcgccgac cggctgcaga cgccggtatt
     4621 cgtgatgctc gacctcgaca tcggcatgaa ccaccgcctc gcccgcccgc ttacctggga
     4681 cgacacccgc aggttcgacc gcggcaaggt gatgacggca gcggcgctcg aagccggcaa
     4741 ggagttcggc cgctatctcg acgtcgacgg cgacggcatc ccctatcgca ccctccccgg
     4801 cacccatccc agcaagggct cgttcttcac ccgcggcacc tcgcgcgatc gttatgcgcg
     4861 ctacaccgag gatggcacgg cctatgccga caacatgcag cggctgctgc gcaagttcga
     4921 gaccgcgaag gacctggtgc cgcgcccgct gcaggcgaac gccggcaagc cgacgaaata
     4981 cggcgtcctc tatttcggtt cgacatcgcc gccgatggac gaggcgatcg aactactcga
     5041 gtccgaaggc cacgtgctcg accgcctgcg cgtgcgcgcc ttcccgttcc attcgagcgt
     5101 gacgagcttc atcggcgagc acgatttcgt gttcgtggtc gaacagaacc gcgactcgca
     5161 gctgcgctcg ctgatcgtca acgaatgcag catcgatccg gtgcggctcg ttccgatcct
     5221 gcactacgac ggcacgccga tcaccgcgcg tttcatcgcc cgcgccatcg ccgaccacct
     5281 cgacgcgctc aaggtcacgc cgctgcgcaa gggcaaggtg gtgtcgtaga aagcactacg
     5341 ggcttcagcc gccggcaagc gcggctgcct cggattttgc gtcgagcgcg gtcttgaatt
     5401 cggcgatcga gcggatcggg atttgctcct tccgatcctg agagcggctg tgatagatgc
     5461 ttttgtagaa gccgcattcg cggcagacat cgcggaactg cccgttctgc tgttcctcga
     5521 tcaaccccat atagagaggg ttgcgcgacg agaggatgtc gcgcagcggc cgctcgttga
     5581 gatcgccgat ggtgagcgag gcgttgacgt cgacgcaggc gcaggcgtga acgagcccgg
     5641 tcgccatgat ctgcacgccg gtgaaaagga gcgagcacgc gccgttcttg tagatcttgc
     5701 tcgaatccat cacgtcgatc gcgagcccct tgaggtcctc cggcgtgatc ttgccacccc
     5761 agctgtgata gagctgcgaa cgcttgaccg agatgccggc cgccttgtag cgctcgagca
     5821 gcttgagcag gtcggtgtcc ggcgtgcgcg gcatgtcgcg cgtcgagcgg atcgcgacat
     5881 tgaggacacc ggcgcgccgg tcgatgaccg tcagcatcgt ctccaggttc gtcaacagcc
     5941 gctgatagac cttgccggtc gcctgcgcga tcctcacgaa gctgtcgcgg tcatggccgt
     6001 agatgctgat ggtcatgtac ttgagcttct tgagcgtcac caggcgcgcg atgtcgtcgc
     6061 tgtcgaggat cgtgaaattg gtgtagaact ggtattcctc gacctccgga tgctcctcca
     6121 ggaacgcgag cttgtcgaag atacggcggt ccatgaagat gtcgccggtg ttcggcgtca
     6181 gatggaagcg ccggtaaccc atcgccaccg cctgcccgac ataatcggcg aagcggtcgt
     6241 tcttcatcga gatcttcggc gaatccttct tcacataggc gcagaagctg cacttgagat
     6301 tgcaggcgct ggtcggctcg atcgccagga tgtcggtgcg catcggcacc atttcgcggc
     6361 cgatcagccg gttggcgttg atctccatca ccgaaaggag attacggccg tgcctgacga
     6421 ctactgcggg attcatcaca aaatcggggc gccggcacga ttgccgctcg ccgcaccgta
     6481 gcggacgccg tcgtcagtgt cgatggcgca cccccgcggt tccctcatca cgcgcggatg
     6541 gccctccgca atgctgtgaa tgacgctatt ccggtctgtc cgggacgctg gagtttcccg
     6601 acaacatcga gtatattcaa tgacatgacc tacgtcgtca aaccgaaatt ccaccacccc
     6661 gccctgccca agaacacgct cggcttcact caccgcgatt acgagggggc ggtgtcgacg
     6721 ctgtgcgctg gctgcggcca cgattcgatc tcggcgtcga tcatcgaggc ctgcttcgaa
     6781 ctctcgatcg agccgcaccg cgtcgccaaa ctttccggca tcggctgctc atcgaagacg
     6841 ccgacctatt ttctcggcaa ctcgcacggc ttcaactcgg tgcacgggcg catgccgtcg
     6901 gtgctcaccg gcgccaacct cgccaaccgc gatctgatct atctcggcgt ctccggcgac
     6961 ggcgactctg cctcgatcgg cttcggccag ttcgcgcacg ccatccgccg cggcgtcaac
     7021 atggtctata tagtggagaa caacggcgtc tacggcctga ccaagggcca gttctccgcc
     7081 actgccgacc gcggctcgaa gtccaagcgc ggcctcatca acaacgacag cgccatcgac
     7141 ctcgttgcca tcgcgctgca ggtcggcgcg actttcgtcg gccgctcgtt ctccggcgac
     7201 aaggcgcaac tgagaccgtt gatcaaagcc gcaatcgagc accggggcgc cgctttcctt
     7261 gacgtgatct cgccctgcgt cgccttcaac aatcacgccg gctcgaccaa gagcttcgac
     7321 tacgtgcgcg agcacaacga agcggtgaac cgcctcgact tcatcaccgg ccgcgccacg
     7381 atcaaggtcg actacgcgcc tgggagcgtc gaagtggtcg agcagcacga cggcacgacg
     7441 ctcgccttgc gcaagatcga ttccgagtac gacgtgcacg accgcgtcgc cgccatgagc
     7501 ttcctgcagg accacgccgc caaggggcag atcgtcaccg gcctgctcta cgtcgcgccc
     7561 gagtcggagg atctgcacgg ccatctcaat acggtcgatg cgccgctcaa tacgctcggc
     7621 gagcgcgaac tttgccccgg ctcggcggcg ctcgacaaga tcaacgccag tctgcggtga
     7681 agcgttagcc attccgcgtc gagctaattc gtccggccgg caccccgcgc ctgatgacgt
     7741 tctcaaccgc caaggcgtct tcctgcaaat ctgcggctat ggatttcggg ctcgccgctt
     7801 cgcggcgccc cggaatgacg ctcattgcaa gcacgcgccc atgtagcgat tacttgcggt
     7861 ccccggcacg ccattgatgc cttgttggaa cgcgcagcgc gacgcgcggt cctggaatgt
     7921 ctc
//
LOCUS       DATMQB010000366         2868 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_462611, whole genome shotgun sequence.
ACCESSION   DATMQB010000366 DATMQB010000000
VERSION     DATMQB010000366.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2868)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2868)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2868
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_462611"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1010)
                     /gene="trpS"
                     /locus_tag="VNY79_10485"
     CDS             complement(<1..1010)
                     /gene="trpS"
                     /locus_tag="VNY79_10485"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004830 - tryptophan-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006436 - tryptophanyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HWX72919.1"
                     /translation="MAFQERVFSGVQPTGNLHLGNYLGAIKRFVELQDRYDCLYCVVD
                     LHAITVWQEPAELPHAIREVTAAFIACGIDPTKHIVFNQSQVAEHAELAWIFNCVARL
                     GWLNRMTQFKEKAGKDRENASVGLYAYPTLMAADILLYRATHVPVGEDQKQHLELSRD
                     IAQKFNNDFGRSIHERGYGAAFFPLPEPLITGEATRVMSLRDGSKKMSKSDASDYSRI
                     NLADDADAIAQKIRKAKTDPEPLPSEEAGLRERPEADNLVGIYAALAGTTRAGVLAEF
                     GNAQFSTFKSALVDLSVAKLGPINAEMKRLLRDPVEIDAVLAAGAARAQKLAAETMKA
                     VK"
     gene            1147..2259
                     /locus_tag="VNY79_10490"
     CDS             1147..2259
                     /locus_tag="VNY79_10490"
                     /inference="COORDINATES: protein motif:HMM:NF012437.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HWX72920.1"
                     /translation="MERRLAAILAADAVGYSRLMRKDEPGALALLHKHRSEVIDPAIA
                     KHRGRTVKLMGDGLLAEFSSVVESVDCAAEIQRTMAARNGGSRGDRQMAFRIGVHLGD
                     VIVEGDDLYGDGVNIAARLEGIAERGGVCISRQAYDQVQNKLALGYRSLGPQHLKNIP
                     EPVEAFAIQGDGLAISDERQEIRYCRTADGVRLAYAFSGQGPPLVKTGNWLNHLEYDW
                     ESPIWRHFFVGLSREHRLIRYDPRGTGLSDWDVADISLDAWVNDVAAVVDAAAVERFP
                     LLGYSQGCAVSIAYAVRHPERVSHLILCGGFARGALKRSVEDRERRQAMNHIDAARMG
                     RGQPLSSPDVRRQDDAGCDQGAGGLVQRDAAKNNFG"
     gene            2216..2512
                     /locus_tag="VNY79_10495"
     CDS             2216..2512
                     /locus_tag="VNY79_10495"
                     /inference="COORDINATES: protein motif:HMM:NF019982.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HWX72921.1"
                     /translation="MDSFNEMQQKTTSAEGAARYYETTGAIDVSNLLALVRAPTLVLH
                     ARGDAQVPFDAGRQLAAGIPGARFVALQGNNHVLLEQDPAAQRFFEEVSLFLAK"
     gene            2615..>2868
                     /locus_tag="VNY79_10500"
     CDS             2615..>2868
                     /locus_tag="VNY79_10500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine kinase"
                     /protein_id="HWX72922.1"
                     /translation="MPPARYDVLGIGNAIVDVIARTEEDFLLKQGMRKGAMALIDEAR
                     AQAIYDAMGSTVETSGGSAANTIVGVASLGARAAFVGKVK"
BASE COUNT          478 a          891 c          970 g          529 t
ORIGIN      
        1 tccttgaccg ccttcatggt ctcggcggcg agcttttgcg cgcgcgcggc gccggcagcg
       61 agcacggcgt cgatctcgac cggatcgcgc agcagccgtt tcatctcggc gttgatcggc
      121 ccgagcttgg cgacggaaag atcgaccagc gccgacttga aggtcgagaa ctgcgcgttg
      181 ccgaactcgg cgagcacgcc ggcgcgggtg gtgccggcga gcgccgcata gatgccgacc
      241 agattgtcgg cctcggggcg ctccctcagg ccagcctctt cgctcggcag cggctccgga
      301 tcggtcttcg ccttgcggat cttctgcgcg atggcatcgg cgtcgtcggc gagattgatg
      361 cgcgaatagt cggacgcgtc cgacttcgac atcttcttgc tgccgtcgcg cagcgacatg
      421 acgcgcgtcg cctcgccggt gatcagcggc tccggcagcg ggaagaacgc ggcgccgtag
      481 ccgcgctcgt gaatcgagcg cccgaaatcg ttgttgaact tctgcgcgat gtcgcgcgac
      541 agttcgaggt gctgcttctg atcctcgccg accggcacgt gcgtcgcccg gtagagcagg
      601 atgtcggcgg ccatcagcgt cgggtaggcg tagaggccga ccgaggcgtt ctcgcggtcc
      661 ttgccggcct tttccttgaa ttgcgtcatg cggttgagcc agccgagacg ggcgacgcag
      721 ttgaagatcc aggcgagctc ggcatgctcg gcgacctggc tctggttgaa cacaatgtgc
      781 tttgtcggat cgatgccgca ggcgatgaat gccgcggtga cttcgcggat ggcgtgcggc
      841 agctccgccg gctcctgcca taccgtgatc gcgtgcaggt cgacgacaca gtagaggcag
      901 tcgtagcggt cctgcagctc gacgaagcgc ttgatggcgc cgagatagtt gccgagatgc
      961 aggttgcccg tcggctgcac gcccgaaaag acccgttcct gaaaggccat gcagaaattc
     1021 tccgcagatc gcgcccggac atgccacggc gaggcgcaat cgtgcaaggc cgctgtctct
     1081 ctgttaaatt gcgcggggac gagggggcgg cgcccgttgg cgccggaaga cggcagtgag
     1141 gctttggtgg aacgcagatt ggccgcgatc ctggccgccg acgcggtcgg ctacagccgg
     1201 ttgatgcgca aggacgagcc gggcgcgctc gccctgctgc acaagcatcg ctcggaggtg
     1261 atcgaccctg cgatcgccaa gcatcgcggc cggacagtga agctgatggg cgacggcctg
     1321 ctggcggaat tttccagcgt cgtcgagagc gtcgactgcg cggccgaaat ccagcggacc
     1381 atggcggcgc gcaacggcgg ctcgcgcggc gaccgccaga tggcatttcg catcggcgtg
     1441 catctcggcg acgtgatcgt cgagggcgat gatctctacg gagacggcgt caacatcgcg
     1501 gcccgtctcg aaggaatcgc cgagcgcggc ggtgtctgca tttcccggca ggcctacgat
     1561 caggtgcaga acaagctggc gctgggttac cgcagtctgg gaccgcagca cctcaagaac
     1621 atcccggagc cggtcgaagc cttcgccatc cagggcgacg ggttggcaat ttccgacgaa
     1681 cggcaggaga ttcgctactg ccgtacggcg gacggcgtgc ggcttgcgta tgcgttcagc
     1741 gggcaaggtc ctcctttggt gaagaccggc aactggctca accatctgga atacgattgg
     1801 gagagtccga tctggcgtca tttctttgtc gggctttcgc gcgagcacag gctgatacgc
     1861 tatgacccgc gcggcaccgg actttccgat tgggacgttg ccgatatatc gctcgacgcc
     1921 tgggtcaatg atgtcgcggc cgtggtcgat gccgccgccg tcgagcgttt ccctttgctg
     1981 ggctattccc agggctgcgc ggtctcgatt gcctatgcgg tgcgccatcc ggagcgcgtc
     2041 tcgcacctca ttctctgcgg cggctttgca cgtggcgcgc tcaagcgttc cgtcgaggac
     2101 cgtgagaggc ggcaagcgat gaatcacatt gatgcggctc gaatggggcg cggacaaccc
     2161 ctctcttcgc cagatgttcg ccgccaagat gatgccggat gcgaccaagg agcaggtgga
     2221 ctcgttcaac gagatgcagc aaaaaacaac ttcggctgaa ggcgcggcgc gctattacga
     2281 gaccaccggg gccatcgacg tcagcaacct gttggccctg gtgagggccc cgacgctcgt
     2341 cctccatgcg cgcggcgacg cgcaagtgcc gtttgatgcg ggacgccagc tcgcggccgg
     2401 gattcccggc gccaggtttg tcgccttgca aggcaacaat catgtcttgc tggagcagga
     2461 cccggcggcg cagcggttct ttgaagaggt cagtcttttc ctggcgaaat agtccaaggc
     2521 gcgcttattc gcgttgctcg cgccattgcc agcatgggcg cgctcgctat agtgccgcct
     2581 ccatcgcgtg tttcctccaa aaaagagcct tccaatgcca cccgcccgct acgacgtgct
     2641 cggtatcggc aatgcgatcg tcgacgtcat tgcccgcacc gaggaggatt ttctgctcaa
     2701 gcagggcatg cgcaaaggcg cgatggcgct gatcgacgag gcgcgcgcgc aggcgatcta
     2761 cgacgcgatg ggctcgaccg tcgagacgtc cggcggctcg gccgcgaata ctattgtcgg
     2821 cgtggcctcg ctcggtgcgc gcgcggcctt cgtcggcaag gtcaagca
//
LOCUS       DATMQB010000367         3442 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1406013, whole genome shotgun sequence.
ACCESSION   DATMQB010000367 DATMQB010000000
VERSION     DATMQB010000367.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3442)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3442)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3442
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1406013"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            299..1171
                     /gene="rlmJ"
                     /locus_tag="VNY79_10505"
     CDS             299..1171
                     /gene="rlmJ"
                     /locus_tag="VNY79_10505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015318478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008649 - rRNA methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0070475 - rRNA base methylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2030)-N(6))-methyltransferase
                     RlmJ"
                     /protein_id="HWX72923.1"
                     /translation="MNYHHAFHAGNFADVHKHAVLGRVLAHLRLKPAPFRVIDTHAGA
                     GRYDLSRPEPARTGEWRRGIARVWKASLPAEPQRLLAPYLGVVSAFNPSQTLGVYPGS
                     PLIAQSLLRPQDRLIACELEPTSATSLAAALRNDRRAKTLEIDGWTALGAYVPPKERR
                     GLVLVDPPFEEAADFARLAGALAAAYRKWPTGIYVLWYPIKERAAPDALALRLRRLAV
                     PKLLRSELTLGPPPVEGGLFGSGLIVVNPPFTLEPELRHLMPALGAVLSPQAAHRLDW
                     LAPERSPPTSKSRQ"
     gene            1377..1592
                     /locus_tag="VNY79_10510"
     CDS             1377..1592
                     /locus_tag="VNY79_10510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HWX72924.1"
                     /translation="MAMTGTVKFFNGERGYGFIKPDDGGRDVFVHITAVERAGLKSLI
                     EGQRISFDVEPDKKGKGPKAVNLVVTS"
     gene            1813..2424
                     /locus_tag="VNY79_10515"
     CDS             1813..2424
                     /locus_tag="VNY79_10515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020177812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase N-terminal
                     domain-containing protein"
                     /protein_id="HWX72925.1"
                     /translation="MTILRSAPPSPFGRKVCIALSLLGLDRDVRVEAADTVDPHDSLR
                     EQNPLGKIPGLIAEDGSTFYDSRVILEYLDDRAGGGKIIPREAGPRFAALRLQALCDG
                     ILDASILTVYEARWRAAEKREPKWLDHQAGKVMRAFAVLEAAPPALGAAIPDVGQIAL
                     ACALGYRDLRFGGDVRSKCPRLVAWLEEFAACVPAYAATTATV"
     gene            complement(2502..3137)
                     /locus_tag="VNY79_10520"
     CDS             complement(2502..3137)
                     /locus_tag="VNY79_10520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018317912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein"
                     /protein_id="HWX72926.1"
                     /translation="MAVLASAAGAADLGVRPAPYYKGPPPAYIPPYTWSGFYIGVNGG
                     GGWGHSNWDTAGGISTSGGLVGGTVGYNYQYDRAVFGVEGDIDWANINGGTTTAGCPL
                     GCQTKDTWLSTVRGRLGYAAGRFMPFVTGGAAFGDIRASTPALAGGNTTNAGWTVGAG
                     IEFALVGNWTAKAEYLYVDLGKLSCGAGCGAPVDNVSFTANIVRGGINYRF"
BASE COUNT          572 a         1153 c         1120 g          597 t
ORIGIN      
        1 gcagtggctc gtcgagcacc gcgggccggt aaccgtcgaa aaacggcagc ccaagggcgt
       61 agactagggc cgctgcgatc gacgtccgga tcatgacggc ttcttcccac catcccgacg
      121 caggcgctgc ttcacccgct cgcccgtcca gggcgcgcag gctagctcgt ccatccaggg
      181 cgcgcaggct agtgccgagt tttcaccagt tcaccaagcc cgccgctaaa actttatcga
      241 ttgcaatgag ttcgctgaac attgacacgc catcagcatg tcgtgcgcgg tggcagcgat
      301 gaattaccac cacgcctttc atgcgggcaa tttcgccgat gtgcacaagc acgccgtgct
      361 cggccgggtg cttgcgcatc tgcggctcaa gccggcaccg tttcgggtca tcgataccca
      421 tgccggcgcc ggccgctacg acctttccag gccggagcct gctcgcaccg gcgaatggcg
      481 ccgcgggatc gcgcgggtct ggaaggcgtc gctgccggct gagccgcagc gtctcctcgc
      541 tccttatctc ggcgtcgtct cggcgttcaa ccccagccag acgcttggcg tctatccggg
      601 ctcgccgctg atcgcgcaaa gcctgttgcg gccgcaggat cggctcatcg cctgcgaact
      661 tgagccgacc tcggccacct cgctggcggc ggcgctgcgc aacgaccgcc gcgccaaaac
      721 cctcgagatc gacggctgga ccgcgctcgg cgcctacgtg ccaccgaagg agcgccgcgg
      781 cctcgtcctg gtcgatccgc cgttcgagga ggcagccgac ttcgcgcgcc tcgccggcgc
      841 gctcgcggcc gcgtaccgca aatggccgac cggcatctac gtgctgtggt atccgatcaa
      901 ggagcgggcc gcgcccgacg cactggcgct ccggctgcgg aggctcgcgg tcccgaaact
      961 cctgcgcagc gaactgacac tcggtccgcc gccggtcgag ggcggactct tcggctccgg
     1021 gctgatcgtg gtcaacccgc cgttcacgct cgagcccgag ttgcggcacc tcatgccggc
     1081 gctcggcgcg gtgctgtcgc cgcaggcggc gcatcgcctc gattggttgg cgccggagcg
     1141 ctcgccgccc acctccaaaa gccgccaata aaggccgtca ataacagccg gccacttttc
     1201 cacacgcagg aattgggcta attaaaggct tgctggctta gacgttccgc ctcctgtggg
     1261 gggccggcgg agtgactgag gccgtctgcg gctgatgctc tttgcccgtg tggatgtccg
     1321 gccgagccgt cgtgccgtgg gggtcgacgg cgaagcaaag cacgggggag ttgtcaatgg
     1381 cgatgaccgg tacggtcaag ttcttcaacg gcgagcgtgg ctacggcttc atcaaaccag
     1441 acgacggcgg gcgcgatgtg ttcgtgcaca tcacggccgt cgaacgcgcg gggctgaaat
     1501 cgttgatcga ggggcagcgc atcagcttcg atgtcgaacc tgacaagaaa ggcaaaggtc
     1561 ctaaagcggt caatctcgtc gtgaccagct agcacgacgg caaacgcgcg cgcattgcgg
     1621 ggcgatcatg ttttcgcctg ggcgcttgcg cggcaatcaa cccgactgac gcgatcgcaa
     1681 cgatgacgtt cgcgacggca acgtgcgagt gcgcacggcg ttgctgatgc cttgcagatc
     1741 tgcagccgcc ggcctcgccg tcatcgtcgt ctgcacgttg cgccgccaac gatttgcgcc
     1801 gatgatgcat cgatgacgat cctgcgttcc gcgccgccct cgccgttcgg ccgcaaggtg
     1861 tgcatcgcgc tgtcgctgct tggcttggat cgcgatgtac gcgtcgaagc cgccgacacc
     1921 gtcgatccgc acgactctct gcgcgagcag aatccgctcg gcaagattcc cgggctgatc
     1981 gccgaggatg gcagcacgtt ctatgattcg cgcgtgatcc ttgaatatct cgacgaccgc
     2041 gccggcggcg gcaagatcat cccgcgcgag gcaggtccgc gctttgccgc gttgcgcctg
     2101 caggcgctgt gcgacggcat tctcgacgcg tcgatcctga ccgtctacga agcccgctgg
     2161 cgcgcggccg agaagcgcga gccgaagtgg ctcgatcatc aggccggaaa ggtgatgcgc
     2221 gcgttcgcgg tgctcgaagc tgctccgccg gcgctcggcg ccgcaatccc ggatgtcggt
     2281 cagatcgcgc tcgcctgtgc gcttggctat cgggacctcc gctttggcgg agatgtccgc
     2341 agcaaatgcc cgcgtcttgt cgcctggctt gaggagttcg ccgcgtgcgt gccagcgtac
     2401 gccgccacga cggcgaccgt gtgatcgcaa aagaaaaaag ccccgaggat tttctcccgg
     2461 ggcttttgct ttcgaccgct tgcgccgcgt agcggcggca atcagaaccg atagttgatg
     2521 ccaccgcgca cgatgttggc ggtgaacgag acgttgtcga ccggcgcacc gcagccggcg
     2581 ccgcagctca gcttgccgag gtcgacatac agatactcgg ccttggccgt ccagttgccg
     2641 accagcgcga actcgatgcc cgcgccgacc gtccagccgg cattggtcgt gttgccgccg
     2701 gcgagtgccg gagtggaagc gcggatatcg ccgaacgcgg cgccgccagt gacaaagggc
     2761 atgaagcggc cagccgcata gccgaggcgc ccgcgcactg tcgagagcca cgtatctttg
     2821 gtctggcagc cgagcggaca gccggcagtc gtcgtgccgc cattgatgtt ggcccagtcg
     2881 atatcgccct caacgccgaa aaccgcgcgg tcgtactggt aattgtaacc gaccgtgccg
     2941 ccgaccagac cgccggacgt gctgatgccg ccggccgtat cccagttcga gtgcccccag
     3001 ccaccgccgc cgttcacgcc gatatagaat ccgctccagg tatagggcgg gatgtatgcc
     3061 ggcggcggcc ccttgtagta gggcgccggc cgtaccccga ggtcggccgc ccccgccgca
     3121 ctcgccaaaa ccgccaagcc taacccacct tatgcacgcg gacgcatgat ctgaaggcga
     3181 gtttttgcag gcacgctcgt ccgttctgcg cgcgccaagc tcggcagatt gattgggtcg
     3241 atgacgctgt caacgcgttg ggggtgaatg gatcggggct cggcggggca tcatcgcccc
     3301 gctggcttat ggtccagacg gttgcagctt gagcgcgaca agactgaacg tctcggcctc
     3361 cgggcagcat gaggcgaggc gatacgaatg cggctcgcgt gctcgatgat acggctggcg
     3421 atcttcaaga gacgcagacg aa
//
LOCUS       DATMQB010000368         2906 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_785501, whole genome shotgun sequence.
ACCESSION   DATMQB010000368 DATMQB010000000
VERSION     DATMQB010000368.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2906)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2906)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2906
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_785501"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..494)
                     /locus_tag="VNY79_10525"
     CDS             complement(<1..494)
                     /locus_tag="VNY79_10525"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72927.1"
                     /translation="MKQRQISRVELASYLLSPSLFVMLALMTVEAMLAAGTTWLVINA
                     GRKVASGQFLLSDLIWILAAQSASYVAGVISWVFAERAGYRGFGKFMLRFARENRGKV
                     KLFNDRPAREQVEPFLTGETFQCFFNLVYELEFALKLFLGLVFNALVLGAEIDLSLPF
                     AYVGA"
     gene            682..1830
                     /locus_tag="VNY79_10530"
     CDS             682..1830
                     /locus_tag="VNY79_10530"
                     /inference="COORDINATES: protein motif:HMM:NF012730.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0005216 - monoatomic ion channel activity
                     [Evidence IEA];
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-gated ion channel"
                     /protein_id="HWX72928.1"
                     /translation="MSKGTLSYVTHLTAPWRRLGGSALVPHGVVVVGLIAMTAFTVPE
                     LRRSAGTWLSLVLWGCFAFFLIEGLLRARATFRAEKVESGLFSASGFIDLLGVLPIPV
                     ALLCGVPPPTAWLFASLWVIKFAQNSREFARLGRVFVLEAKPLASVAVLFLIVLFLAS
                     AAMHVIERKGQPEAFGTVPHSLWWAVVTLTTTGYGDEVPQTLLGRFLGGLVMVCGIAT
                     FGLWTGILANGFAAESRRSNFIQTWDIVSKVPFFQTLDPSAITEVTHMLRRVEMPERT
                     AVVRRGRVGDCMYFIAEGEVQVDIEPTPVRLGTGAFFGEMALLGNSVRSANVSTTQPS
                     TLLILDLADFRTLTAHHPELARIIEAEGKRRLSDNQRRRELQLHGGAS"
     gene            1881..>2906
                     /gene="fahA"
                     /locus_tag="VNY79_10535"
     CDS             1881..>2906
                     /gene="fahA"
                     /locus_tag="VNY79_10535"
                     /EC_number="3.7.1.2"
                     /inference="COORDINATES: protein motif:HMM:TIGR01266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004334 - fumarylacetoacetase activity
                     [Evidence IEA];
                     GO_process: GO:0006559 - L-phenylalanine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0006572 - tyrosine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetase"
                     /protein_id="HWX72929.1"
                     /translation="MTVPLNETHDPARRSFLESANAADCDFPIQNLPFGVFRPVPGAT
                     PRVGVAIGDAILDVAAAAASFAGVAADAARACAAPSLNPLMALGPPVWSALRLALSRG
                     LSASHGEQSLRRNLVPMAQAKLELPVRIGDFTDFFASIFHATNTGRAFRPDNPLLPNY
                     KYLPVAYHGRASSVRASGTAVRRPCGQRKRANETAPSYGPSRNLDFELELGFYIGVPS
                     RLGETVPIARAAEHIFGFCLLNDWSARDIQGWEYQPLGPFLGKNFATTVSPWVVTQEA
                     LAPFRVAAFARPADDPPPLPYLDDPEDRAHGGLDVTLEAYLASAAMREAGNAPLRLAQ
                     SSFPTVYW"
BASE COUNT          450 a          959 c          962 g          535 t
ORIGIN      
        1 gcgccgacat aggcgaacgg caggctcagg tcgatttccg cgccgagcac gagcgcattg
       61 aacacgagcc cgagaaagag tttcagcgcg aattcgagct cgtacaccag gttgaagaag
      121 cattggaagg tctcgccggt caggaacggc tcgacttgct cgcgcgccgg ccggtcgttg
      181 aacagcttga ccttgccgcg gttctcgcgc gcgaaacgca gcatgaattt gccgaagccg
      241 cggtagccgg cacgctcggc gaagacccag ctgatgaccc cggcgacgta ggaggccgac
      301 tgcgcggcca gaatccagat cagatcgctg agcaggaatt ggccgctggc gactttgcgc
      361 ccggcgttga tgacgagcca ggtggtcccg gcggcgagca tggcctccac ggtcatcagc
      421 gccagcatca cgaaaagtga aggcgacagc agatagctcg ccagctccac gcgcgaaatc
      481 tgcctttgct tcatggtgat cccggacgag agtgggaatg ccttagtcgg cggtgcagtc
      541 taatggcatc cagcttcgaa ataaattaag cgtgcgcgca gcggccgcaa attcggctgg
      601 cgatacgaac tccggcggcg taatttgccg tcaatgccgg ctgcggatcg ttaacgcgcg
      661 gccgccgccc aggcccgcct gatgtcaaaa ggcacgctct cctacgtgac gcatttgacg
      721 gcgccgtggc gccgtctcgg cggctccgcg ctggtgcctc acggcgtggt cgtcgtcggc
      781 ctgatcgcga tgacggcgtt cacggtgccg gaactgcgcc ggtcggcggg tacctggctc
      841 agcctggtgt tgtggggctg ctttgccttt ttcctgatcg agggcctgct gcgcgcgcgt
      901 gcgacattcc gcgccgaaaa ggtcgagagc ggcctgttct cggcctcggg cttcatcgac
      961 ctcctcggcg tgcttccgat ccccgtggct ttgctgtgcg gcgtgccgcc gccgacggca
     1021 tggctgttcg catcgctttg ggtcatcaag ttcgcgcaga actcgcgtga attcgcccgg
     1081 ctcggacgtg tcttcgtcct cgaggcaaag ccgctggcga gcgtggcggt gctgtttctg
     1141 atcgtgttgt ttctggcctc ggccgcgatg cacgtgatcg agcgcaaggg ccagccggaa
     1201 gcgttcggca ctgtgccgca ttccctgtgg tgggcggtgg tgacgttgac gacgaccggc
     1261 tacggcgacg aggtgccgca gaccctgctc ggccgcttcc tcggcgggct ggtcatggtt
     1321 tgcgggatcg cgaccttcgg attgtggacc ggcatcctcg ccaacggttt cgcggccgag
     1381 agtcggcgca gcaacttcat ccagacctgg gacatcgtta gcaaggtgcc gttcttccag
     1441 acactcgatc cgagcgcgat caccgaggtc acccatatgc tgcgccgcgt ggagatgccc
     1501 gaacggaccg ccgttgtccg ccgcggcagg gtcggcgatt gcatgtattt cattgccgag
     1561 ggggaggtgc aggtcgacat tgagccgacg ccggtccgtc ttggcacggg cgccttcttc
     1621 ggcgagatgg cgctcctcgg caattcggtc cgcagcgcca acgtctcgac gacacagccc
     1681 tcgacgttgc tgattctcga ccttgccgat ttccgcaccc tgacggcgca tcatccggag
     1741 cttgcccgca tcatcgaagc cgagggcaaa cggcgtctga gcgacaatca acgccggcgc
     1801 gagctgcagc tgcacggcgg cgcatcgtaa accgctgccg tggtagccgc gcaaggggcg
     1861 atcttgccta ggttggtcaa atgacagtcc cgctgaacga gacgcacgat ccggcgcgcc
     1921 gaagcttcct cgaaagcgcg aacgccgccg actgcgattt cccgatccag aacctgccgt
     1981 tcggcgtgtt ccgcccggtg cccggggcga ccccgcgcgt cggcgtggcg atcggtgacg
     2041 cgatcctcga cgtcgccgca gccgctgcct ctttcgccgg cgtcgcggcc gatgccgcgc
     2101 gcgcgtgcgc cgcaccctcc ctcaatccgc tgatggcgct cgggccgccg gtctggtcgg
     2161 ccttgcggct ggcgctgtcg cggggtttga gcgcctcgca tggcgagcaa agcctgcgcc
     2221 ggaaccttgt cccgatggcg caagctaaac ttgagctgcc ggtgcggatc ggcgacttca
     2281 ccgacttctt cgcctcgatc ttccacgcca ccaataccgg ccgcgcgttc cggccggaca
     2341 acccgctgct gcccaactac aaatacctgc ccgtggcgta tcacgggcgc gcctcctcgg
     2401 tgcgcgccag cggtacggcc gtgcggcggc cgtgtgggca gcgcaaacgc gcgaacgaga
     2461 cggcgccgag ctacggtcct tcgcgcaatc tcgatttcga gctcgagctc ggcttctata
     2521 tcggcgtgcc gagccggttg ggcgaaaccg ttcccatcgc ccgggcggca gagcacattt
     2581 tcggcttctg cctgctcaat gactggtcgg cgcgcgatat ccagggctgg gaataccagc
     2641 cgctcgggcc gttcctgggc aagaatttcg ccacgaccgt ctcgccctgg gtggtgacgc
     2701 aggaggcgct ggcgccgttc cgtgtcgcag cgtttgcgcg gcccgccgac gatccgccgc
     2761 cgctgccgta tctcgacgat ccggaggatc gcgcccatgg cggcctcgac gtcacgcttg
     2821 aggcctatct tgcgagcgcg gcgatgcggg aagccgggaa cgcaccgttg cgcctcgcgc
     2881 agagttcgtt cccgacggtc tattgg
//
LOCUS       DATMQB010000369         4555 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_786963, whole genome shotgun sequence.
ACCESSION   DATMQB010000369 DATMQB010000000
VERSION     DATMQB010000369.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4555)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4555)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4555
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_786963"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..520
                     /locus_tag="VNY79_10540"
     CDS             <1..520
                     /locus_tag="VNY79_10540"
                     /inference="COORDINATES: protein motif:HMM:NF021264.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="mitofilin family membrane protein"
                     /protein_id="HWX72930.1"
                     /translation="VARTTVAAEALRAAVERGVPYQAELAAVKSLGVEDSVLAPLEPF
                     AADGIPSVAVLARELTALTPALVRASGAEPSEDSFLGRLQANAQKLVRVTPVDAPPGD
                     DSGAIIARIDVDARRSNIAAALAEIARLPDAARSLAGAWVNKAEAREAAIAASRRIAA
                     AALAALGKPPQQ"
     gene            517..2091
                     /locus_tag="VNY79_10545"
     CDS             517..2091
                     /locus_tag="VNY79_10545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme biosynthesis HemY N-terminal
                     domain-containing protein"
                     /protein_id="HWX72931.1"
                     /translation="MIRVLYFLIVVGALSLGIAWLADRPGEVVLTWQGWRIETSLLVL
                     GAAMVAVLALLALVWGVFRAVLRSPFMLRNLLHDRRGVRAYEAISRGLIAVGAGDLAA
                     AHRFAAEVKRIAPAEPLALLLTAQAAQLAGDREAADRAFRTMASRADTKTLGLHGLYI
                     EAQRRDDPASARAYAEEAARTSPALAWAGKAVLEFRCATGDWAGALALLERNKRALDK
                     AIYRRQRAVMLTARALTVEETDRDNAKLFALEAAKLAPELVPAAALAGRMLAEGGELR
                     RASRIIDKAWRANPHPDLARTYADLRFGDAARDRLKRIENLAKKAPGHLESALALGRA
                     ALDAREFAKARAALTPCLAAPTRRVALLMAALERTERGDEGRAREWVARALTAAPDPA
                     WTADGYVSDRWLPASPVTGRLDAFEWRVPLAGIVNAAAPVIEPEPAPAVPVASAPAPL
                     GGNAALPAGGAAELPAAAAEGAIAPARRRGRRAPPKPEAVIPLVHAPDDPGPEAAQES
                     EPSAEAQNGAWRKIFE"
     gene            2179..3165
                     /locus_tag="VNY79_10550"
     CDS             2179..3165
                     /locus_tag="VNY79_10550"
                     /inference="COORDINATES: protein motif:HMM:NF006015.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HWX72932.1"
                     /translation="MPELTARRRLSQRPAQGPQSESASAMAFLAAIGREVRRQRAKRG
                     MTRRQLAQASQTSERYLAQIESGAGNPSVSVLRAIAQALDLPAAALLPDTAGRGAALG
                     GIIDLLAQVPQGEWPALAKMIEARVALPGGADRGRRIALVGLRGAGKSTLGRMLAQHL
                     GWPFIELDRRVEEDYGASIPDLMEMAGTATFRRHERGALDRVIAEHEAAVITTAGGIV
                     SNPETYALLLRSAHAVWIKARPEERMSRVMAQGDFRPMAQNRAAMADLVAILEARRAD
                     YARAEAEIDTSGDSAAQSFAALLRVVTPWTQAAAGEGRASRATDEELAERRP"
     gene            3162..3992
                     /locus_tag="VNY79_10555"
     CDS             3162..3992
                     /locus_tag="VNY79_10555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HWX72933.1"
                     /translation="MTLAADGFLDLGSARLEYRMIGPRPDAAPTIMMLHEGLGCVGLW
                     GTFPDKVAAATGAGVFVYSRAGYGRSSPAKLPRPLSFMDDEALDMLPRLLAAIGFQRG
                     ILLGHSDGASIATIYAGGVQDHRIRGLVLMAPHFFTEEMGLAEIRRAGEAFDAGILRD
                     KLKRWHADVDGAFRSWIGPWLDPDFRKWDITEALGYIRVPILIVQGADDQYGTLRQVE
                     VANEECFCPVETAVLAAARHSPHRDAPEATLEAVAGFINRLLRDHREGEPRMDSGVAA
                     "
     gene            4076..>4555
                     /locus_tag="VNY79_10560"
     CDS             4076..>4555
                     /locus_tag="VNY79_10560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HWX72934.1"
                     /translation="MTDAQHAAERPLANGHTRIDFQTEPERYRHWKLDVDGDVATLLL
                     DVDEKGALFEGYDLKLNSYDLGVDIELADAIERLRFEHPQVKVVVLRSGKPRVFCAGA
                     NIRMLAGASHAHKVNFCKFTNETRNGIEDLSEHSGLKTICAISGTAAGGGYELALAAD
                     "
BASE COUNT          678 a         1619 c         1604 g          654 t
ORIGIN      
        1 cgtggcgcgc accactgtcg cggccgaggc gcttcgcgcc gcggtcgagc gcggcgttcc
       61 ctatcaggcc gaactcgccg cggtgaaatc gctcggggtc gaggacagcg tattggcgcc
      121 gctcgaacct tttgccgccg acggcatccc gagcgttgcc gtcctggcgc gcgagctcac
      181 ggcgctcacg cccgctttgg tgcgcgcgtc cggcgccgag ccgagcgagg attccttcct
      241 cggccggctg caagccaatg cgcagaagct cgtccgcgtc accccggtcg acgccccgcc
      301 gggcgacgat tccggcgcga tcatcgcccg catcgatgtt gacgccaggc gcagcaatat
      361 cgccgccgcg ctcgccgaga tcgcgcgatt gccggatgcc gcccgctcgc tcgctggcgc
      421 gtgggtcaac aaggccgagg cgcgcgaagc ggccatcgca gcgagccggc gcattgccgc
      481 cgccgccctc gccgcgctcg gcaagccgcc gcaacaatga tccgcgtcct ctatttcctg
      541 atcgtcgtcg gcgcgctgtc gctcggcata gcgtggctcg ccgaccgccc cggcgaagtc
      601 gtcctcacct ggcagggctg gcgcatcgaa acgtcgctcc tggttctggg cgcggccatg
      661 gtggcggtcc tggcgctgct ggcgctggtg tggggcgttt tccgcgccgt gctgcgctcg
      721 ccgttcatgc tgcgcaatct gctgcatgat cgccgcggcg tgcgcgccta cgaggcgatc
      781 tcgcgcgggc tcatcgccgt cggcgccggc gaccttgccg ctgcgcacag gttcgcggcc
      841 gaggtgaaac gcatcgcacc ggccgagccg ctcgcgctgc tgctcaccgc ccaggcggcg
      901 cagctcgccg gcgatcgtga ggccgccgac cgcgccttcc gcaccatggc gagccgcgcc
      961 gacaccaaaa ccctcggcct gcacgggctc tacatcgaag cacagcggcg cgacgatccc
     1021 gccagcgccc gcgcctacgc cgaggaagcg gcgcgcacga gcccggcgct ggcctgggcc
     1081 ggcaaggccg tgctcgaatt tcgctgcgcc accggcgatt gggccggcgc gctcgcgctg
     1141 ctcgagcgca acaagcgcgc gctcgacaag gcgatctacc gccgccagcg tgcggtgatg
     1201 cttaccgccc gtgcgctcac ggtcgaggag accgaccgcg acaacgccaa gctgttcgcg
     1261 ctcgaagccg ccaagctcgc gccggagctg gtgccggcgg cggcgctggc tggccgcatg
     1321 ctcgccgaag gcggcgagtt gcgccgggcc tcgcgcatca tcgacaaggc gtggcgggcg
     1381 aatccgcacc ccgatctcgc ccggacctac gccgaccttc gcttcggcga cgccgcgcgc
     1441 gatcgcctca agcgcatcga gaacctcgcg aagaaggcgc cgggccacct cgaaagcgcg
     1501 ctggcgctcg gccgcgcggc gctcgatgcg cgcgaatttg ccaaggcgcg ggcggcgctc
     1561 acgccctgcc tcgcggcgcc gacgagacgc gtggccttgc tgatggccgc gctggagcgg
     1621 accgagcgcg gcgacgaggg ccgcgcgcgc gaatgggtgg cgcgggcgct caccgccgcg
     1681 cccgacccgg cctggacggc cgacggctac gtgtccgatc ggtggctgcc ggcatcgccg
     1741 gtgaccggtc gcctcgacgc gttcgagtgg cgcgtgccgc tcgccggcat cgtcaacgcg
     1801 gccgcgccag tgatcgagcc cgagcccgct ccggctgtcc cggttgcgag cgcgcctgcg
     1861 ccgctgggcg gcaatgcggc gctgccggct ggaggcgcgg ccgagctgcc ggccgccgct
     1921 gccgagggcg ccatcgcgcc ggcccgccgc cgcggccggc gcgccccgcc gaagccggag
     1981 gcggtgatcc cgctggtcca tgcgccggat gatccgggac cggaagcggc ccaggaaagc
     2041 gagccgagcg ccgaggcgca aaacggcgcc tggcgcaaga ttttcgagtg agccggaacc
     2101 cgggcgtgcg cggcttgcca agtctgatcc gcatgtgcat tatccgacat catgaactat
     2161 aatgcatgag acccgggaat gcctgaactg acagcgagac gcaggctatc gcagcggccg
     2221 gctcagggtc cgcaaagcga aagtgcatcg gcgatggcgt tcctcgcggc gatcgggcgc
     2281 gaagtgcggc gccagcgcgc caagcgcggt atgacgcggc gccaattggc gcaggcttcg
     2341 cagacgtccg aacgctacct cgcgcagatc gaaagcggcg ccggcaaccc gtcggtcagc
     2401 gtgctgcgcg cgatcgcgca ggcgcttgac ctgccggccg cggcgctgct gccggataca
     2461 gccggccgcg gcgctgcact cggcggtatc atcgatctcc tcgcgcaggt gccgcagggc
     2521 gaatggcccg cgctcgcgaa gatgatcgaa gcgcgggtcg cgctcccggg aggcgccgac
     2581 cgcgggcggc ggatcgcgct ggtcggcctg cgcggcgcag gaaaatccac gctcgggcgc
     2641 atgctcgcgc agcacctcgg ctggccgttc atcgagctcg accgccgcgt cgaggaggat
     2701 tacggcgcca gcatccccga cctcatggag atggccggca cggcaacttt ccgccgccac
     2761 gagcgtggcg cgctcgaccg cgtcattgcc gagcacgagg cggcggtgat cacgacggcc
     2821 ggcggtatcg tttccaatcc cgagacctac gcgctgctgc tgcgcagcgc gcacgcggtg
     2881 tggatcaagg cgcgtccgga agagcgcatg agccgagtga tggcgcaggg cgatttccgt
     2941 cccatggcgc agaaccgcgc ggcgatggcc gatctcgtcg ccatcctcga ggcgcggcgc
     3001 gccgactacg cgcgcgcgga ggccgagatc gacacatccg gcgattccgc cgcgcagagt
     3061 tttgccgcgc tgctgcgcgt tgtgacgccg tggacgcagg ctgctgctgg cgaggggcgt
     3121 gcgtcgcgag cgacggacga ggaattagcg gagcggcggc catgacgctc gccgccgacg
     3181 gctttctcga cctcggctct gcgcggctcg aataccgcat gatcggaccg cggcccgatg
     3241 cggcgccgac catcatgatg ctgcacgaag gcctcggctg tgtcggcctg tggggcacgt
     3301 tccccgacaa ggtcgcggcg gcgacgggcg ccggcgtgtt cgtctactcg cgtgcgggct
     3361 acgggcgatc gagtccggca aagctgccgc gcccgctgtc cttcatggac gacgaggcgc
     3421 tcgacatgct gccgcgcttg ctcgcagcca tcggatttca gcgcggcatc ttgctcggcc
     3481 acagcgacgg cgcctcgatc gccaccatct atgccggcgg ggtgcaggat caccgcatcc
     3541 gcggcctggt gctcatggcg ccgcatttct tcaccgagga aatggggctt gccgaaatcc
     3601 gccgcgcagg ggaggcgttc gacgccggca tcttgcgcga caagctcaag cgctggcacg
     3661 ccgatgtcga cggcgctttc cgctcctgga tcggcccgtg gctcgatccg gatttccgca
     3721 agtgggacat caccgaggcg ctcggctaca tccgcgtgcc gatcctgatc gtgcaggggg
     3781 cggacgatca atacggcacg ctgcggcagg tcgaggtggc gaacgaggag tgcttctgcc
     3841 cggtcgagac ggccgtactc gccgcggcgc ggcactcccc gcatcgcgac gcgcccgagg
     3901 ccacgcttga agcggttgct ggcttcatca accggctgct gcgcgaccac cgcgaaggcg
     3961 agccgcggat ggattcaggg gttgcggcct gatgaagtat agtgcatatt aactgccgcc
     4021 gggaagatgc attataatac agtacccgga gcaggatgcg gtcgaggatg gtgcgatgac
     4081 tgacgcgcag catgcggctg aacggcctct ggccaacggc catacccgaa tcgatttcca
     4141 gaccgagccg gagcgctacc gccattggaa gctcgacgtc gacggcgacg tggccacgct
     4201 tctcctcgac gtggacgaga agggcgcact gttcgagggc tacgacctca agctcaactc
     4261 ctacgacctc ggcgtcgaca tcgagctcgc tgacgccatc gaacggctgc ggttcgagca
     4321 cccgcaggtc aaggtcgtgg tgctgcgctc gggcaagccg cgggtgttct gcgccggcgc
     4381 caacatccgc atgctggccg gcgcgagcca cgcccacaag gtcaacttct gcaaattcac
     4441 caacgagacg cgcaacggca tcgaggattt gagcgagcat tccggcctca agaccatctg
     4501 cgccatcagc ggcacggcgg caggcggcgg ctatgaactc gcgctcgcgg ccgac
//
LOCUS       DATMQB010000370         3663 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3261804, whole genome shotgun sequence.
ACCESSION   DATMQB010000370 DATMQB010000000
VERSION     DATMQB010000370.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3663)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3663)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3663
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3261804"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..664)
                     /locus_tag="VNY79_10565"
     CDS             complement(<1..664)
                     /locus_tag="VNY79_10565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012592215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HWX72935.1"
                     /translation="MQTFAPFAPVTRLRAINPRQIRLYHNRSAYANCRICFGPYVCAA
                     GMAFRPLKCLATVHGCGRVMGGTAQTLVTGATGFVGSAVARKLSLAGTRARVLVRPGS
                     PRFHLDGLDLEFVGGDLRDVQSVRAAMAGIRHVFHVAADYRLWARDPGEIFAVNVEGT
                     RQVMQEALRAGVERVVYTSSVATLGLRADGSPADESVPLSVEEGIGAYKRSKIAAERL
                     VEA"
     gene            663..1433
                     /locus_tag="VNY79_10570"
     CDS             663..1433
                     /locus_tag="VNY79_10570"
                     /inference="COORDINATES: protein motif:HMM:NF005476.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="phosphorylase"
                     /protein_id="HWX72936.1"
                     /translation="MTSQFDCVGAALADGMVSDGDDRYEVASAAVENQRRVVIAFVGM
                     AFEARIAAGPGVLVVCRTAGSELATVAESAVRHGYRGMLSFGVAGGLASHLRAGDWVV
                     ASAVRESQTVRATDATWSRRLLDMIDDAIHAPVVGVDTPIAEPTKKRELHRTTGAAAV
                     DMESHIVARVAAAHRLAFAAVRVIVDPAHRRIPPAALLGMRPDGRADVLAILRDLMTR
                     PSQLRPLARVAVDALAARAAMHRVRRLLGPHFGLADLA"
     gene            complement(1522..2946)
                     /locus_tag="VNY79_10575"
     CDS             complement(1522..2946)
                     /locus_tag="VNY79_10575"
                     /EC_number="1.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HWX72937.1"
                     /translation="MYAKLELYIDGQWLNGEGRAGEDVINPATEKPLAHLPHASTADL
                     DRALEAAKKGFAAWRATSAYDRAKIIRKAADLMRERHDAISKILVQEQGKAYPEARAE
                     VITSADIIEWYAEEGRRAYGRVVPGRGKVRQIVVQEPVGIVAAFTPWNFPTLTPARKI
                     GGALAAGCSLIIKASEETPGSCVELVRCFADAGLPAGVLNLVFGVPAKISEHLIAKDA
                     VRKISFTGSIPVGKHLAVLAAKGMKRATMELGGHSPVVVFADADPEKSADTIAAFKYR
                     NAGQVCISPTRFYVQEQVYGRFLARFTEYAKSLKLGDGLEKGVTMGPLANARRIDAME
                     TFVNDAKDRGGKIVTGGARHGNQGYFFEPTVITDVPDDSKIMTQEPFGPVAPVVTFKT
                     LDEVVERANSLPFGLAAYTFTGSAQTANMMGDALQSGMVGVNSIAVSTPETPFGGVKE
                     SGYGSEGGIEGLQAYLSTKFISQM"
     gene            complement(3133..>3663)
                     /locus_tag="VNY79_10580"
     CDS             complement(3133..>3663)
                     /locus_tag="VNY79_10580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009209234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione binding-like protein"
                     /protein_id="HWX72938.1"
                     /translation="SKDEQFKPEFLQISPNNRIPAIVDRDSGLSLMESGAILIYLADK
                     TGRFLPKAGEPRYRVLEWLMWQMGGPGPMFGQVHHFVKYNKGKAPYAEERYLKEAHRL
                     YGVLDRRLAGRDFVAGDYSIADIAIWPWVSRYEWQTVDLGAYANVKRWYTAIAQRPAV
                     QRGYKVPKDVGEIPMP"
BASE COUNT          563 a         1222 c         1234 g          644 t
ORIGIN      
        1 tggcctcgac cagccgttcg gcggcaatct tgctgcgctt ataggcgccg atcccctcct
       61 cgaccgacaa cgggacgctt tcgtctgccg ggctgccgtc ggcgcgcagc ccaagcgtcg
      121 ctacgctgct cgtatagacg acgcgctcga cgccggcgcg cagcgcctcc tgcatcactt
      181 ggcgcgtgcc ctccacattg acggcaaaga tctcgccggg gtcgcgcgcc cagaggcggt
      241 agtcggccgc gacgtgaaac acgtgccgga tgccggccat ggccgcgcgg accgattgga
      301 cgtcgcgcaa gtcgccaccg acgaactcga ggtcgagccc gtccaggtga aaccgcgggc
      361 tgccgggccg gaccagcacc cgcgcgcggg ttcccgcgag agacagcttt ctcgccaccg
      421 ccgagccgac gaacccggtg gcgccggtga cgagggtctg tgccgtgccg cccatgacgc
      481 gtccgcaacc gtgaacggta gccaagcact ttaacggccg aaaggccatg cccgcagcgc
      541 atacgtaggg accgaagcaa atccggcaat tcgcatacgc cgagcggttg tgatagagtc
      601 gaatttgtcg ggggttgatc gcgcgaagtc gggtgaccgg cgcgaagggg gcgaaggttt
      661 gcatgacatc ccaattcgat tgcgtcgggg cagcgctcgc agacgggatg gtgagtgacg
      721 gcgacgacag gtacgaagtc gccagtgcag cagtcgaaaa tcaacgccgc gtcgtcatcg
      781 ctttcgtcgg catggccttc gaggccagaa ttgccgccgg tcccggcgtt ctggttgtat
      841 gccgaaccgc gggaagcgaa ctcgccactg tggcggagag cgcggtccgc cacggctacc
      901 gcggcatgct cagcttcggc gtcgccggcg gtctcgcctc gcatctgcgc gccggcgact
      961 gggtcgtcgc ttccgccgtg cgcgaatcgc agacggtgcg cgccaccgac gccacctggt
     1021 cgcgccggct tctcgacatg atcgacgatg caatccacgc cccggtcgtc ggcgtcgaca
     1081 cgccgatcgc ggagccgacg aagaagcggg agctgcaccg gacgaccggg gccgctgcgg
     1141 tcgacatgga atcgcacatc gtggcgcggg tcgccgccgc acaccggctg gcgtttgcgg
     1201 cggtacgggt cattgtcgac ccggcccatc ggcggattcc gccggccgcc cttctcggaa
     1261 tgcgccccga cggccgcgcc gatgtcttgg cgatcttgcg cgacctcatg acgcgaccgt
     1321 cgcagctcag gccgctggcc cgcgtggccg tcgatgcgct cgccgcccgc gccgccatgc
     1381 accgcgtgcg ccgcctgctc ggaccgcatt tcgggctcgc cgatctcgcc taagccttcg
     1441 ccagcgcaat aaccgaccgg gtccccgctt tcgcagggac gaacgggcga gagcagcggg
     1501 ttcgagcgca ctgagcgtgc tctacatctg cgagatgaac ttcgtgctca gataggcctg
     1561 caatccttcg atgccgccct cgctgccgta gcccgattcc ttgacgccgc cgaacggtgt
     1621 ttccggcgtg gacacggcga tcgagttcac gccgaccatg ccggactgca gcgcgtcccc
     1681 catcatattc gcggtctgcg ccgaaccggt gaaggtgtag gcggcaagcc cgaagggcag
     1741 tgaattggcg cgttccacga cttcgtcgag cgtcttgaac gtcaccaccg gcgccaccgg
     1801 tccgaacggc tcctgcgtca tgatcttgga atcatcgggc acgtcggtga tcaccgtcgg
     1861 ctcgaagaag tagccctggt tgccgtggcg cgcgccgccg gtgacgatct tgccgccgcg
     1921 gtccttggcg tcgttgacga acgtctccat ggcatcgatg cgccgcgcat tggcgagcgg
     1981 ccccatggtg acgccctttt ccaggccgtc gccgagcttg agcgacttgg cgtactcggt
     2041 gaagcgggcg aggaagcggc catagacctg ctcctgcacg tagaaccgcg tcggcgagat
     2101 gcatacctgc ccggcgtttc ggtacttgaa tgcggcgatg gtgtcggcgg atttttccgg
     2161 gtcggcgtcg gcgaacacca cgaccggcga atgaccgcca agctccatgg tggcgcgctt
     2221 cattcccttg gccgcgagca ccgcgaggtg cttgccgacc ggaatcgacc cggtgaacga
     2281 aatcttgcgt acagcgtcct tggcgatgag gtgctcggag atcttcgccg gcacgccgaa
     2341 gaccagattg agcacgccgg ccggcagccc ggcgtcggcg aagcagcgca ccagctccac
     2401 gcaggagccc ggggtctcct cggaggcctt gatgatgagc gagcagccgg ccgccagcgc
     2461 gccgccgatc ttgcgcgccg gcgtcagcgt cgggaaattc cacggcgtga aggcggcgac
     2521 gatgccgacc ggctcctgca ccacgatctg ccgcaccttg ccgcggcccg gaacgacgcg
     2581 gccgtaggcg cggcggccct cctcggcgta ccactcgatg atgtcggcgg acgtgatcac
     2641 ctcggcgcgc gcttcgggat aggccttgcc ctgctcctgc accaggatct tgctgatcgc
     2701 atcgtgacgc tcgcgcatga ggtcggcggc cttgcggatg atcttggcgc ggtcgtaggc
     2761 cgaggtcgcg cgccacgcgg caaagccttt tttcgcggct tcgagcgcgc ggtcgagatc
     2821 ggccgtgctc gcgtgcggca ggtgcgcgag cggcttttct gttgccgggt tgatcacgtc
     2881 ctcgccggcg cggccttcgc cgttgagcca ctggccgtcg atatagagtt cgagcttggc
     2941 gtacatgggg gttctcctgg gggttttcct cggcgtaccg cgcttgcgtg ggggcttgct
     3001 cgcgcaggga tttagcaggt tttctggccg cgttcacccc tcccgctgat gcggcagcac
     3061 cggcgccgaa gagaattagc cggcgcttgg ggcgaggcga aattcgagcc ctcttttatg
     3121 agttaagccc tgtcacggca tcgggatctc gccgacgtcc ttcggcacct tgtagccgcg
     3181 ctgtacggcg gggcgctgcg cgatcgccgt gtaccagcgt ttcacgttgg cataggcgcc
     3241 aagatccacg gtctgccatt cgtagcgtga gacccacggc cagatggcga tgtcggcgat
     3301 cgaatagtcg ccggcgacga agtcgcgccc ggcgaggcgg cggtcgagca cgccgtagag
     3361 ccggtgcgct tccttgaggt agcgctcttc ggcgtaaggc gccttgcctt tgttgtattt
     3421 cacgaaatga tgcacttggc cgaacatcgg ccccgggccg cccatctgcc acatcagcca
     3481 ttcgagcacg cgatagcgcg gctcgcccgc cttcggcagg aagcggccgg tcttgtcggc
     3541 gagatagatg aggatcgcgc cggactccat caggctcagg ccgctgtcgc ggtcgacgat
     3601 cgccggaatg cggttgttgg gactgatctg caggaattcc ggcttgaact gctcgtcctt
     3661 gct
//
LOCUS       DATMQB010000371         5821 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4184019, whole genome shotgun sequence.
ACCESSION   DATMQB010000371 DATMQB010000000
VERSION     DATMQB010000371.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5821
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4184019"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..355
                     /locus_tag="VNY79_10585"
     CDS             <1..355
                     /locus_tag="VNY79_10585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HWX72939.1"
                     /translation="TLRARFQSCSEGIPFARALREVAVRDQVSKFSADLPQQLRDILD
                     GTAVGHLTPPETTAEGVQMFAVCDKKETKSDTPEMREIRDQIFQQKFGAQAKRYLDNL
                     RRGALIEYKMTEDNK"
     gene            373..1395
                     /gene="pdxA"
                     /locus_tag="VNY79_10590"
     CDS             373..1395
                     /gene="pdxA"
                     /locus_tag="VNY79_10590"
                     /EC_number="1.1.1.262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050570 - 4-hydroxythreonine-4-phosphate
                     dehydrogenase activity [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_process: GO:0042823 - pyridoxal phosphate biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxythreonine-4-phosphate dehydrogenase
                     PdxA"
                     /protein_id="HWX72940.1"
                     /translation="MQPLALTLGEPAGIGPDLAVAVWRRRAELDLPRFYLIADPDFIR
                     RRAERLNLEVPIATVTPAAAAAAFPSALPVVDLDVAVSAEPGRPDRSSAPAAIASLRR
                     AVADVLSGAATAVVTSPVAKNVLYSWGFAEPGQTEFLATLAQETTGKWQRPVMMLWSP
                     ELAVVPVTTHLPLREIFAHLSTELVIETGRIVARDLAGRFRIPRPRLAVAGLNPHAGE
                     EGTLGEEDRAIVAPAVARLKADGIDVRGPLPADSLFHRRARASYDAALCMYHDQALIP
                     IKTLAFDHAVNVTLGLPFVRTSPDHGTAFDIAGTGTADATSLVAALRLAARLAIADNR
                     APLAAS"
     gene            1392..2264
                     /gene="rsmA"
                     /locus_tag="VNY79_10595"
     CDS             1392..2264
                     /gene="rsmA"
                     /locus_tag="VNY79_10595"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000179 - rRNA
                     (adenine-N6,N6-)-dimethyltransferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HWX72941.1"
                     /translation="MTAAPDGLPPLREVIRRHGLIARRSLGQNFLLDLNLAARIARSA
                     GELAGATVFEVGPGPGGLTRALLALGAARVIAVERDERAIAALREIGEHYPGRLDVVA
                     ADALTFDPQSRFDHGPARIVANLPYNIATALLVSWVCVEPWPPWYDGAVLMFQREVAE
                     RIVAAPGSKTYGRLSVLVQWRCTARILFDVNASAFVPPPKVTSSLVRLTPLAAPLPCD
                     RPSLETATQAAFGQRRKMLRQSLRPLGGDTPALIAAAGLDPTARAEDISVAGFVSLAR
                     AVAARRGFKAGAGA"
     gene            2286..3344
                     /locus_tag="VNY79_10600"
     CDS             2286..3344
                     /locus_tag="VNY79_10600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006613428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HWX72942.1"
                     /translation="MTQMRRQSLVAYGQPLCETVVDCPAPRGNEVLLRIERCGVCHSD
                     LHLQDGYFALGNDKRLDVTAGRKLPFTLGHEIAGVIESAGEAADPEIIGRRVAVYPWI
                     GCGTCAACRAGEENLCSAHRHLGVAADGGYATHVLVPHARYLLDYAPLSAAFAGMLMC
                     SGLTAYSALKRLGGRPERGPVLLVGLGGVGMMGLAIAHTLFRQPPIVADIDAAKRDAA
                     LAAGAAQAFDPSDPQARKAIIAATGGGVMAACDFAGSEKSLQFATGVLARGGKVVVTG
                     LLGGTFAMPVAMFAIKAMTIEGTLTGTLAEARELIELACSGKIAPITTRDRPLEEAQA
                     ALDDLRAGRVVGRTVLTV"
     gene            3372..4094
                     /locus_tag="VNY79_10605"
     CDS             3372..4094
                     /locus_tag="VNY79_10605"
                     /EC_number="3.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012456055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family cysteine hydrolase"
                     /protein_id="HWX72943.1"
                     /translation="MDAFVYGKRRPLPQGFDEFVSVVDTAVVSIDLHQGHLADTPDCP
                     CPAPRAREVVEGVNRFHAAARALNVPIIHIKSVLRRDGADDVNGVKSAWRFVFPLHVG
                     PIPNSDQHALEGSRWTQFVTEVADRDYVVATKKRLSAFYPTDLDFLLRNMGAKRLVLN
                     GCMTDCCILNTAFDASNFGYRVTVAQDLVRGTNEDMEDTALKMISLHIGLVVESRDLL
                     DEWQRQVDAARPPLLRASGQVA"
     gene            4110..4961
                     /locus_tag="VNY79_10610"
     CDS             4110..4961
                     /locus_tag="VNY79_10610"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF016115.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HWX72944.1"
                     /translation="MKIVDLSHLMNVHTPGWVGYAGNKMYYAQNLQTKMIVAQRIDTA
                     LHVGTHIDGAMHGTDGMGDMASYPLDFLVGAGAVIDVSRHMDDWAVITPEMIEAAPVE
                     VRDGDILIIHTGWHRYWEGQPRQDLVRYFCMHPGGKIELLEWMLKKRIKWFGIDCGSA
                     DHSMNTSIRMMRPDIAKRFEQRVGATCEEFFGDYTYVHKKSGRRVTENIFPFHSYAFQ
                     EGLIHAENVGGDIEKVLNQRFLIGAFPWRYEGLEACPCRIVCFSDCGESVEAVGDVAK
                     AVLSRRP"
     gene            complement(5084..5737)
                     /gene="gmk"
                     /locus_tag="VNY79_10615"
     CDS             complement(5084..5737)
                     /gene="gmk"
                     /locus_tag="VNY79_10615"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004385 - guanylate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0015949 - nucleobase-containing small
                     molecule interconversion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HWX72945.1"
                     /translation="MARLARNRRKIARRGLMLVLSSPSGAGKTTLSRMLLKADRNVEL
                     SVSVTTRPQRRGETEGHDYHFISPPRFEEMVKAGELLEWADVFGYRYGTPRRPVEKAL
                     RAGRDVLFDIDWQGTQQLREKARDDLVSVFVLPPAVKELERRLKRRAQDSKDIIGSRM
                     AKAAGEMSHWPEYDYVIVNREKAEAFAEVRAILAAERVRRERQIGLSDFVRSLQAQL"
BASE COUNT          930 a         2004 c         1896 g          991 t
ORIGIN      
        1 caccctgcgc gcgcgctttc agagctgcag cgaaggcatt ccgtttgccc gcgcgctccg
       61 ggaagtcgcc gtacgcgatc aggtctcgaa attctcagcc gacctgccgc agcagctgcg
      121 cgacatcctc gacggcaccg cggtgggcca tctgacgccg ccggagacga cggccgaggg
      181 ggtgcagatg ttcgcggtct gcgacaagaa ggagaccaaa tcggatacac cggagatgcg
      241 ggagattcgc gatcagatct tccagcagaa gttcggcgcg caggccaagc gctatctcga
      301 caatttgcgg cgcggcgcgt tgatcgaata caagatgacc gaagacaata agtaggcgga
      361 cagaagcgaa acgtgcagcc tctggcattg acgctcggcg aacccgccgg gatcggcccc
      421 gatcttgccg tggcggtctg gcgtcgacgg gccgaactcg atcttccgcg attttatctt
      481 atcgccgatc cggattttat ccgccggcgc gccgagcggc ttaaccttga agtcccgatc
      541 gccacggtga cgccggcggc ggctgccgcg gcgtttccgt ccgctctgcc tgtggtcgac
      601 ctcgatgttg cggtgagtgc cgagccgggt cgtcccgatc ggtcgagcgc gcccgccgcc
      661 atcgcgtcgc tacgccgcgc ggtcgccgac gtcctctccg gcgccgccac cgccgtggtt
      721 accagtccgg tggcgaagaa tgtcctctat agctggggtt tcgccgagcc ggggcagacc
      781 gaatttttgg cgacgctggc gcaggagacg accggcaagt ggcaaaggcc ggtcatgatg
      841 ctgtggtcgc ccgagctggc ggtcgtgccg gtgacgaccc atctgccgct gcgcgaaatc
      901 ttcgcacatt tgtcgaccga gcttgtgatc gagaccgggc gcatcgtagc gcgcgatctt
      961 gccggccggt tccgcattcc acggccgcgg ctcgccgtag ccgggctcaa tccccacgcc
     1021 ggcgaagaag gtacgctcgg cgaagaggac cgcgcgatcg ttgcgcccgc cgtcgcgcgg
     1081 ctcaaagccg acggcatcga tgtccgcggc ccgctgcccg ccgactcgct gttccaccga
     1141 cgcgcccgcg cgagctacga tgccgctttg tgcatgtatc acgaccaggc gctgatcccg
     1201 atcaagacgc ttgccttcga ccacgccgtc aatgtcacgc tcggcctgcc cttcgtgcgc
     1261 acctcgccgg accacggcac cgccttcgac atcgccggca ccggcaccgc cgacgcgacg
     1321 agccttgttg cggccttgcg gctggcggcg cggcttgcca tagcggacaa ccgggcgccg
     1381 ctcgccgcgt cgtgaccgcc gcgcccgacg gcctgccgcc gctgcgcgag gtcatccgcc
     1441 ggcacggtct catcgccagg agatcgctcg ggcagaattt cctgctcgat ctcaatctcg
     1501 ccgcccgcat cgcgcggtca gcgggagagc tcgccggcgc cacggtgttc gaagtcggcc
     1561 ccggaccggg cggcctgacg cgcgctttgc tcgcgctcgg cgccgcccgc gtcatcgccg
     1621 tcgagcgcga cgagcgcgcg atcgccgcct tgcgcgaaat cggcgagcac tatcccggcc
     1681 ggctcgacgt cgtcgcagcg gacgcgctga cgttcgaccc gcagagccgt ttcgatcacg
     1741 gtcccgcacg catcgtcgcc aatctgccct acaacatcgc gaccgccctg ctcgtctcct
     1801 gggtatgcgt cgagccctgg ccgccctggt acgatggggc cgtcctcatg ttccagcgtg
     1861 aagtcgccga gcgcatcgtg gcggcaccgg gctcgaaaac ctacggccgg ctgtcggtgc
     1921 tggtgcaatg gcgctgcacc gcgcgcatcc tgttcgacgt caatgcttcg gccttcgtgc
     1981 cgccgccaaa ggtcacctcg tcgctggtac ggctcacgcc tttggcggcg ccgttgccct
     2041 gcgatcgccc gagcctcgag acggcgaccc aggccgcctt cggccagcgc cgcaagatgc
     2101 tgcgccaaag cctgcgcccg ctcggcggcg acacgccggc attgatcgcg gcggccggcc
     2161 ttgacccgac ggcgcgggcc gaggacattt ccgtcgccgg cttcgtatcg ctcgcgcggg
     2221 cggtcgcggc gcggcgcggg ttcaaggccg gcgccggcgc atgatgcggg gaggagcgga
     2281 ccaccatgac ccagatgcgc cgtcaatcgc tcgtcgccta cggccaaccg ctctgcgaaa
     2341 ccgtcgtcga ctgtccggca ccccgcggca acgaagtgct cttgcgcatc gagcgctgcg
     2401 gcgtgtgcca ttccgacttg cacctgcagg acggctattt cgcgctcggc aacgacaaaa
     2461 ggctcgacgt caccgccggc cgcaagctgc cgttcacgct cggccatgag attgccggcg
     2521 tgatcgaaag cgcgggagag gcggccgacc cggagatcat cggccgccgc gttgcggtct
     2581 acccctggat tggctgcggc acctgcgccg cctgccgcgc cggcgaggaa aacctctgct
     2641 cggcgcatcg tcatctcgga gttgccgccg acggcggcta cgccacccat gtgctggttc
     2701 cgcatgcgcg ctatctcctc gactacgcgc cgctctcggc cgcctttgcg ggaatgctga
     2761 tgtgctcggg cttgaccgcc tattcggcgc tcaagcggct tggcggccgg ccggagcgcg
     2821 gcccggtcct gctcgtcggg cttggcggcg tcggcatgat ggggctcgcg atcgcgcaca
     2881 cgctgtttcg ccaaccgccg atcgtcgccg acatcgacgc cgcaaagcgc gatgcggcgc
     2941 tcgccgccgg cgcagcacag gccttcgatc catccgatcc gcaggcgcgc aaggccatca
     3001 tagcggcgac cggcggcggg gtgatggcgg cctgcgactt cgccggctcg gagaaatcct
     3061 tgcagttcgc gaccggcgtc ctcgcccgcg gtggcaaggt cgtggtgacc ggccttctcg
     3121 gcggtacctt cgccatgccg gtggcgatgt tcgcgatcaa ggccatgacc atcgagggca
     3181 cactgaccgg tacgctcgcc gaggcgcgtg agctgatcga gctggcgtgc tcgggaaaga
     3241 tcgcgccgat cacgacccgg gaccggccgc tcgaggaagc gcaggcggcg cttgacgatc
     3301 tgcgcgccgg ccgcgtcgtc ggccgcaccg tgctgacggt ctagcgtgca atgcaagcga
     3361 aggagcgcac gatggacgct ttcgtgtacg gcaaaagacg acccctcccg cagggcttcg
     3421 acgaattcgt ctcggttgtc gatacggctg tcgtgtcgat cgacctgcac caaggccatc
     3481 tggcggacac gccggattgc ccctgccctg ctccccgcgc ccgcgaggtc gtcgagggcg
     3541 tcaatcgctt ccacgccgcg gcccgcgcgc tgaacgtgcc catcatccac ataaagagcg
     3601 tcctgcgccg cgacggcgcc gacgacgtca acggggtcaa atcagcctgg cgctttgtct
     3661 tcccgctgca cgtcggtccc attcccaatt ccgatcagca cgcgctggag ggcagccgct
     3721 ggacgcagtt cgtgaccgaa gtcgcggacc gcgactatgt cgtggcgacc aagaaacgct
     3781 tgtcggcatt ctacccgacc gatcttgact tcctcctgcg caacatgggc gcgaagcggc
     3841 tggtgctcaa cggctgcatg accgattgtt gcatcctcaa taccgccttc gacgccagca
     3901 atttcggata ccgcgtcacc gtcgcccagg atctcgtgcg cggcaccaat gaagacatgg
     3961 aggacaccgc gctgaagatg atctcgctgc atatcgggct cgtcgtcgag agccgcgacc
     4021 tgctcgacga atggcagcgg caggtcgacg ccgcgagacc gccgctgttg cgggcatccg
     4081 gacaggtcgc ctagccggca ggtgccccga tgaagattgt cgatctgagc catttgatga
     4141 acgtgcatac gccgggttgg gtcggctacg ccggcaacaa gatgtactac gcacagaacc
     4201 tgcagacgaa aatgatcgtc gcgcagcgga tcgataccgc cctgcacgtc ggcactcaca
     4261 tcgacggcgc catgcacgga accgacggca tgggcgacat ggcctcctat ccgctggatt
     4321 tcctggtcgg agccggcgcg gtgatcgacg tgtcgcggca catggacgac tgggccgtca
     4381 tcaccccgga gatgatcgag gcagctccgg tcgaggtccg cgacggcgac atcctcatca
     4441 tccacaccgg ctggcaccgc tactgggaag gacagccgcg ccaggatctg gtgcgctatt
     4501 tctgcatgca cccgggcggc aagatcgagc tgcttgagtg gatgctcaag aagaggatca
     4561 agtggtttgg gatcgattgc ggctccgccg accactcgat gaacacgtcg atccgcatga
     4621 tgcggccaga catcgccaag cgcttcgagc agcgggtggg agccacctgc gaggagtttt
     4681 ttggcgacta cacctacgtc cacaagaagt cgggccgccg ggtgaccgag aacatctttc
     4741 ccttccacag ctacgcgttc caggagggtt tgatccatgc cgagaatgtc ggcggcgaca
     4801 tcgagaaggt gctgaaccag cgctttctca tcggtgcctt cccgtggcgc tacgagggcc
     4861 tggaagcatg cccgtgccgc atcgtctgct tctcggattg cggcgaatcg gtcgaggctg
     4921 tgggcgacgt cgccaaggcg gtcctgtcgc gccggccgtg actgcaatcc gtgtccggtt
     4981 ctcgttcgcc gttccggggc agtgattgat atctgcgaag cggcaggccg gcgcgagacg
     5041 cgcaagcggg acgggctgca tcacggtccg ccccgagcct cggtcacagt tgcgcctgca
     5101 gcgagcgcac gaaatctgaa aggccgatct gccgctcgcg ccgcacccgt tccgcagcga
     5161 ggatggcgcg cacctcggcg aaggcttcgg ccttctcgcg gttgacgatg acgtaatcgt
     5221 attccggcca atggctcatc tcgcccgcgg ccttggccat gcgcgaaccg atgatgtctt
     5281 tgctgtcctg ggcgcggcgc ttgagccgcc gctccagttc cttcactgcc ggcggcaaga
     5341 cgaagacgct gacgagatcg tcgcgcgcct tctcgcgcag ctgctgcgtg ccctgccaat
     5401 cgatgtcgaa cagcacgtcg cggccggcac gcaacgcctt ctcgacgggc cgccgcggcg
     5461 tgccgtagcg gtatccgaag acatcggccc attcgagaag ctcgccggcc ttcaccatct
     5521 cctcgaaccg gggcggcgag atgaaatgat agtcgtgtcc ctcggtctcg ccgcggcgtt
     5581 gcggacgcgt ggtcaccgac acggagagtt cgacattgcg atcggccttg agcagcatgc
     5641 gcgaaagcgt cgtcttgccg gcgcccgaag gcgaggacag gacgagcatg aggccgcggc
     5701 gggcaatctt ccttcgattt cgggccaagc gagccatgcc ctattccacg ttctgcacct
     5761 gctcgcggaa ctgctcgacc gcggccttga gctccaagcc gatattggtg agctcgacgt
     5821 c
//
LOCUS       DATMQB010000372         6345 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4184116, whole genome shotgun sequence.
ACCESSION   DATMQB010000372 DATMQB010000000
VERSION     DATMQB010000372.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6345)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6345)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6345
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4184116"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..357)
                     /locus_tag="VNY79_10620"
     CDS             complement(<1..357)
                     /locus_tag="VNY79_10620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019400856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1223 domain-containing protein"
                     /protein_id="HWX72946.1"
                     /translation="MLRRRFAPVPLVASLLIASCALARAEEPRALLELFTSQGCSSCP
                     AADRLLGELAGDSSLIALSVPIDYWDYLGWKDTLASAGHSARQRAYARMRGDRQVYTP
                     QIVVNGATHVLGSDRAA"
     gene            complement(460..3165)
                     /gene="acnA"
                     /locus_tag="VNY79_10625"
     CDS             complement(460..3165)
                     /gene="acnA"
                     /locus_tag="VNY79_10625"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003994 - aconitate hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HWX72947.1"
                     /translation="MTSLDSFKCLRPLKVGSKTYAFYSMPEAEKNGLKGISRLPFSLK
                     VLLENLLRNEDGRTVNKEDIQSVALWLKTKTSEREIAFRPARVLMQDFTGVPAVVDLA
                     AMRDAMKMLGGDAKKINPLVPVDLVIDHSVAVNFFGNNAAFKKNVEEEYKQNQERYRF
                     LKWAQRSFEDFRVVPPGTGICHQVNLEYLSHTVWTAKTKIKFADKIVANELAYPDTLV
                     GTDSHTTMVNGLSVLGWGVGGIEAEAAMLGQPYSMLLPEVIGVRLNGKLKEGVTATDL
                     VLTVTQMLRKRGVVGKFVEYFGPGVANLTIEDRATLGNMSPEYGATCGFFPIDDDTMR
                     YLRDTGRPAERVALVLAYAKAQGLYRTKTTPDPVFTDVLKLELGSVEPSLAGPKRPQD
                     RVPLKEVKSGFALAMDQEFGKGAEIDKRVPVEGREHTLGHGDVVIAAITSCTNTSNPS
                     VMIAAGLLARKAVAKGLAVKPWVKTSLAPGSQVVAEYFEKSGLQKDLDQLGFNLVGFG
                     CTTCIGNSGPLPPEISKAVNDSDLVAAAVLSGNRNFEGRVNADVRANYLASPPLVVAY
                     AIAGSMHVDVAKAPLGTDQKGRKVYLRDIWPSSREIGEIIRKNISRQMFTRKYADVFK
                     GDTNWRKISVQGALTYPWDRKSTYVQNPPYFSSMARRPELPSDIIDARILGLFLDSIT
                     TDHISPAGSIKVDSPAGKYLVDHKVKPLDFNQYGTRRGNHEVMMRGTFANIRLKNQMV
                     AGVEGGYTIHYPSGERMTIYDAAMRYKSENVPLVVFAGKEYGTGSSRDWAAKGTILLG
                     VRAVVAQSFERIHRSNLVGMGVVPLVFEEGTSWQTLGLKGSEQVTLRGLHGDLKPHQR
                     LIAEIIAADGGLKRVPLICRIDTVDELDYYRNGGILQYVLRRLAA"
     gene            3416..4009
                     /gene="ccmA"
                     /locus_tag="VNY79_10630"
                     /pseudo
     CDS             3416..4009
                     /gene="ccmA"
                     /locus_tag="VNY79_10630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083298.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015439 - ABC-type heme transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC exporter ATP-binding protein CcmA"
     gene            4141..4809
                     /gene="ccmB"
                     /locus_tag="VNY79_10635"
     CDS             4141..4809
                     /gene="ccmB"
                     /locus_tag="VNY79_10635"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015232 - heme transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmB"
                     /protein_id="HWX72948.1"
                     /translation="MTALAAMLVRDMRIAVRVGGGALMGVLFFLVVAAMVPFALGPDL
                     ALLKRIGPAILWLAALLASLLALDRLFAADHEDGSLDLILMGRAPLELVVAIKGVAHW
                     LTTGLPLVVAAPIIGLFLNLDGPAEVTLVLTLLAGTPALTFIGLIGAAIAVTLRRGGL
                     LVAVLVLPLTVPVLIFGVAAANAVSSRPVPFGTPFTILCALTLASLVVGPFAAAAALR
                     QEME"
     gene            4885..5613
                     /locus_tag="VNY79_10640"
     CDS             4885..5613
                     /locus_tag="VNY79_10640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter permease"
                     /protein_id="HWX72949.1"
                     /translation="MAIVDLANPSRFLNLANRAIPWFGGAAVLAFAFGLNQVAAVPDD
                     YQQGATVKIMFLHVPGAWLGMLGWAVMTVAALGTLVWRHPLADVTAKAAAPIGAAFTL
                     MCLVTGSLWGRPMWGTYWVWDARLTSVLVLFLLYLGVIAVWRTVEDPSRAARAAAILT
                     IVGALDLPIIKFSVDWWNTLHQPASVLRGGGPAIHPTFLMPLLIMASAFTLLFAALLL
                     AAMRNEILRRRVRTLRLLQASAVT"
     gene            5616..5819
                     /gene="ccmD"
                     /locus_tag="VNY79_10645"
     CDS             5616..5819
                     /gene="ccmD"
                     /locus_tag="VNY79_10645"
                     /EC_number="7.6.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007068251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0015886 - heme transport [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="heme exporter protein CcmD"
                     /protein_id="HWX72950.1"
                     /translation="MEAADHLGFIVAAYAAAAAVVLALIAWVALDYHAQRRALADLER
                     RGFSRRSEPMRSAPAMEQAKEGA"
     gene            5816..>6345
                     /locus_tag="VNY79_10650"
     CDS             5816..>6345
                     /locus_tag="VNY79_10650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbE family thiol:disulfide interchange protein"
                     /protein_id="HWX72951.1"
                     /translation="MSTIPNGTANVRRRRAFGLVPLLLFVGLVLLFLIRLIAGDPSRI
                     PSALIGQPAPQTSLPPLAGLERNGEAVPGIDPAAFKGAVTVLNVWASWCVECHDEATL
                     LMQLAQDHRLRIIGINYKDEPENARRFLGRYGNPFVAAGADQSGRAAIEWGVYGVPET
                     FVIGRDGRIAYKLVGA"
BASE COUNT          959 a         2105 c         2089 g         1192 t
ORIGIN      
        1 cgcggcgcgg tcgctgccga gcacgtgggt tgcgccgttg accacgatct gcggcgtgta
       61 cacctgccgg tcgccgcgca tgcgcgcata ggcgcgctgc cgcgccgaat gcccggcgct
      121 ggcgagcgtg tctttccacc cgagatagtc ccagtagtcg atcggtacgc tcagcgcgat
      181 aagcgaggaa tcaccggcga gctcgccgag cagcctgtcg gccgccggac acgaggagca
      241 gccctggctg gtgaacagtt cgagcagcgc ccgcggctct tccgcgcgtg caagcgcgca
      301 gctcgcaatg agcaggctgg cgacgagtgg caccggcgcg aaccggcgac gcagcattcc
      361 aatttccacc cggcggaccc tcggtgacga tttgatgacg ggtattgata ccgagcgtgc
      421 aagtcacccg ccactcaatt cgcggtgagg ctcgcccggt caggccgcaa gccggcgcag
      481 cacatactgc aatatgccgc cgtttcgata gtagtcgagc tcgtcgaccg tatcgatccg
      541 gcagatcagc ggaacgcgct tgagcccgcc gtcggccgcg atgatctcgg cgatcagccg
      601 ctgatgcggc ttgaggtcgc catgaaggcc gcggagcgtc acctgctcgc tgcccttgag
      661 cccgagcgtc tgccaggagg tcccctcctc gaataccagc ggcaccacgc ccatgccgac
      721 cagattggag cgatggatgc gttcgaacga ctgcgcgacc acggcgcgca cgccaagcag
      781 gatcgtgccc tttgccgccc agtcgcgcga ggaaccggtg ccgtactcct tgccggcgaa
      841 cacgaccagc ggcacgttct cgctcttgta gcgcattgcc gcgtcgtaga tcgtcatgcg
      901 ctcgccggac ggatagtgga tggtgtagcc gccttcgacg ccggccacca tctggttctt
      961 cagccggatg ttggcgaagg tgccgcgcat catcacctca tgattgccgc ggcgcgtgcc
     1021 gtactggttg aaatcgagcg gcttgacctt gtgatcgacc agatatttgc cggcgggcga
     1081 atcgaccttg atcgagccgg ccggcgaaat gtggtcggtg gtgatcgagt cgaggaacag
     1141 gccgagaatg cgcgcgtcga tgatgtcgct cggcagctcg ggccggcgcg ccatgctgga
     1201 gaaatagggc gggttctgca cgtaggtcga tttgcggtcc cagggatagg tcagcgcgcc
     1261 ctgcacgctg atcttgcgcc agttggtgtc acccttgaac acgtcggcgt atttgcgcgt
     1321 gaacatctgc ctgctgatgt tcttgcggat gatttcgccg atctcgcggc tcgacggcca
     1381 gatatcgcgc agatagacct tgcggccctt ctggtcggtg ccgagcggcg ccttggcgac
     1441 gtcgacgtgc atcgagccgg cgatcgcgta ggcgacgacg agcggcggcg aggcgagata
     1501 gttggcgcgc acgtcggcgt tgacgcggcc ttcgaaattg cggttgccgg aaagcaccgc
     1561 cgcggcgacg agatcgctgt cgttgaccgc cttggaaatc tccggcggca gcgggcccga
     1621 attgccgatg caggtggtgc agccgaagcc gacgagattg aagccgagct ggtcgaggtc
     1681 cttctgcagg ccggatttct cgaaatattc ggccaccacc tgcgagccgg gcgcgagcga
     1741 ggttttgacc cacggcttga cggcaagccc cttcgccacc gccttgcggg caagaagacc
     1801 cgccgcgatc atcacgctcg ggttcgaagt gttggtgcag gaagtgatcg ccgcgatcac
     1861 cacgtcgcca tggccgagcg tgtgctcacg gccctcgacc ggaacgcgtt tgtcaatctc
     1921 ggcgcctttg ccgaattcct gatccatcgc cagcgcaaac ccgctcttga cctctttgag
     1981 cggcacgcgg tcctgcggac gcttcggccc ggcaagcgac ggctcgaccg agccgagttc
     2041 gagcttgagc acgtcggtga ataccgggtc cggcgtcgtc ttggtgcggt acaggccctg
     2101 cgccttggca taggcaagaa cgagagcgac gcgctcggcc ggccgtccgg tatcgcgcag
     2161 gtagcgcatg gtgtcgtcgt cgatcggaaa gaaaccgcag gtcgccccgt attccggcga
     2221 catgttgccg agcgtggcgc ggtcttcgat cgtcagattg gccacgcccg gaccgaaata
     2281 ctcgacgaac tttccgacaa cgccgcgctt gcgcagcatc tgcgtgacgg tgagaacgag
     2341 atcggtcgcg gtgacgccct ccttgagctt gccgttcaag cgcaccccga tcacttccgg
     2401 cagcagcatc gaatacggct ggccgagcat cgcggcctcg gcttcgatgc cgcccacgcc
     2461 ccaaccgagc accgagagcc cgttcaccat ggtcgtgtgc gaatcggtcc ccaccagcgt
     2521 gtccgggtag gcaagctcgt tcgcgacgat cttgtcggcg aacttgatct tggtcttcgc
     2581 ggtccacacc gtgtgcgaga ggtattcgag attgacctgg tggcagatgc cggtgccggg
     2641 cggcaccacg cgaaaatcct cgaacgagcg ctgcgcccat ttcagaaaac ggtagcgttc
     2701 ctggttctgt ttgtactctt cctcgacgtt cttcttgaat gcggcgttgt tgccgaagaa
     2761 gttcaccgcc accgaatgat cgatgacgag gtcgaccggc accaggggat tgatcttctt
     2821 ggcgtcgccg ccgagcatct tcatggcgtc gcgcatggcg gcgagatcga ctaccgcggg
     2881 cacgccggtg aaatcctgca tcagcacgcg cgccggacga aaggcgattt cgcgctccga
     2941 ggtcttggtc ttgagccata gcgcgaccga ctggatgtcc tccttgttga ctgtgcggcc
     3001 atcctcgttg cgcagcaggt tctcaagcag caccttgagc gagaagggca gccgcgagat
     3061 gcccttcagg ccgttcttct ccgcttccgg catgctgtag aaggcatagg tcttggagcc
     3121 gaccttgagc ggccgcaggc acttgaagct atcgagcgaa gtcatgatta ttttcccatc
     3181 ctgccggccg ccgccggcgc aaatcgcagg tcatgaattg cggaacaggt gccaacggaa
     3241 cgctggtggc cgggacgcgg cgggcgctgc actcggtctc gcggcttata tggcgttttc
     3301 agcacttgtg ccagttcagc aatgaatggt ccgctatcat ccaacgcatg acgctgccgt
     3361 ccgggagctg ttggcagacc ggcgcgccgt tcgcccggcg cccgggagct gattgatgcg
     3421 gctcacggcc tccaacctga cctgccgacg cggcggtcgc gaagtcttcg ccggcgtgag
     3481 cttttccgtc gcctccggcg agcttttggc gatccgcggc cgcaatggcg cgggaaaatc
     3541 ctccctcttg cgcatggtcg tcgggctcgt gcgcgtggcc gacggccagc tcgcgctcga
     3601 ggccggcgat cccgaactta cgatcggcga gcaggcccat tatctcggcc accaggacgc
     3661 gcttaagcct tcgttatcgg tacgcgagaa tttgcagttc tgggccgact ttctcggcac
     3721 cggagccgcc gctatcggcg agccgctggc gagggtcggg ctcgaaacgc tcgccgacct
     3781 ccccgccgcc tatctctcgg cggggcagcg ccgccgcctc tcgatcgccc gcctcctcgt
     3841 cgtcacgcgc ccgatctggc tgcttgatga gccgttgagc gcgctggatg ccgtcgcgca
     3901 gcaaagcctg accgagttca tgcgggcgca tctcgccggc ggcggcgtca tcctggccgc
     3961 aacccatggc gcgctcgggc tttccgccgt gcgtgaggtt tggctcggcg aagctccctc
     4021 ccccctcgtg ggggagggtt ggggtggagg gtcgggaggt ggtgcgacaa catcgacgcc
     4081 cgcacgtcgc gtcgccaacc ccacccccac cccatccccc tccgggaaag gggaagagac
     4141 atgaccgcgc tcgccgcgat gctcgttcgc gacatgcgca ttgcggtgcg cgtcggcggc
     4201 ggcgcgctga tgggggtcct gttcttcctt gtggtggccg cgatggtgcc gttcgccctc
     4261 gggccggacc ttgcgctgct caagcgcatc ggcccggcga tcctctggct tgcggcgctg
     4321 ctggcgagcc tgctggcgct cgaccggctg tttgccgccg atcatgagga cggctcgctt
     4381 gatctcatcc tcatggggcg cgcgccgctc gaacttgtgg tcgcgattaa gggggtggcc
     4441 cactggctga ctacgggcct gccgctggtg gtcgccgcgc cgatcatcgg gctcttcctt
     4501 aacctcgacg gcccggccga agtgacgctg gtgctgacgc tcctggccgg cacgccggcc
     4561 ttgaccttca tcggcctgat cggcgccgca atcgcggtga cgctgcgccg cggcggcctg
     4621 ctggtcgcgg ttctggtgtt gcccctgacg gtgccggtgc tcatcttcgg cgtcgccgca
     4681 gcgaacgcag tgtccagccg gcccgtgccg ttcggcacgc cgtttacgat tctttgtgca
     4741 ttgacgctgg caagcctggt ggtgggaccg ttcgccgcgg cggccgcgtt gcggcaggag
     4801 atggaataga cataagggga cgcgaagccc ggacggggca gccgccattg tcctgccgcg
     4861 tctgcgtgga ctaggaagca gccgatggcc atcgtcgatc tcgccaatcc gtcgcgtttc
     4921 ctgaacctcg ccaaccgcgc cattccatgg ttcggcggcg cggcggtgct tgccttcgcc
     4981 ttcgggctca atcaggtcgc ggccgtaccc gacgactacc agcagggcgc gaccgtcaaa
     5041 atcatgtttc tccacgtacc cggcgcctgg ctcggcatgc tcggctgggc ggtgatgacc
     5101 gtcgccgcct tgggaacgct ggtttggcgc catccgctcg ccgacgtcac cgccaaggcg
     5161 gcggcgccca tcggcgcggc cttcaccctc atgtgcctcg ttaccggttc gctctggggc
     5221 cggccgatgt ggggcaccta ctgggtgtgg gacgcaaggc tcacgtcggt gctggttcta
     5281 ttcctgctct acctcggggt catcgcggtg tggcgaacgg tcgaggatcc ctcgcgcgcg
     5341 gcgcgcgcgg cggctatcct caccatcgtc ggcgcgctcg acctgcccat catcaaattt
     5401 tcggtcgact ggtggaacac attgcaccag ccggcgtcgg tgctccgtgg cggcggcccg
     5461 gccattcatc cgacgttcct catgccgctt ctgatcatgg caagcgcgtt cacgctcctg
     5521 tttgccgcgc tccttctcgc cgccatgcgc aacgaaatcc tgcgccgccg cgtgcgcacg
     5581 ctgcggctgc tgcaggcgag cgcggtgacc tgaacatgga agcagcggac catctcggtt
     5641 tcatcgtcgc ggcctatgcc gccgcggccg cggtcgtgct cgccttgatc gcctgggtgg
     5701 cgctcgacta tcacgcgcag cggcgggcgc tcgccgatct tgagcggcgc ggtttttccc
     5761 gccgctccga gccaatgcgc tccgcgccgg ccatggagca ggctaaggaa ggcgcatgag
     5821 cacgataccg aatgggaccg caaacgttcg ccggcgccgc gccttcgggc tggtaccgct
     5881 cctcctgttc gttgggctcg tgctgctttt tctgatccgg ctcatcgccg gcgatccctc
     5941 gcgcattccc tccgctctca tcggccagcc cgcgccgcaa acaagcctgc ctccgctggc
     6001 cggtctcgag cgcaacggcg aagccgtgcc cggcatcgat ccggcagcgt tcaagggcgc
     6061 ggtgactgtg ctgaatgtct gggcgtcatg gtgtgtggag tgtcacgacg aagccacgct
     6121 gctgatgcag ctggcgcagg atcaccgttt gcgcatcatc ggcatcaact acaaggacga
     6181 acccgagaac gcccggcgtt ttctgggccg ctacggcaat ccgttcgtcg ctgccggcgc
     6241 ggaccagagc ggccgcgccg cgatcgagtg gggcgtctac ggcgtgccgg agacgttcgt
     6301 catcggccgc gacggccgca tcgcctacaa gctggtcggc gcgat
//
LOCUS       DATMQB010000373         2608 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2640839, whole genome shotgun sequence.
ACCESSION   DATMQB010000373 DATMQB010000000
VERSION     DATMQB010000373.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2608)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2608)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2608
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2640839"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            23..1228
                     /locus_tag="VNY79_10655"
     CDS             23..1228
                     /locus_tag="VNY79_10655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015669690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX72952.1"
                     /translation="MDLRFTADELAFRDELRTFFRDNLPGDIRERMRLGHAPTKDDTV
                     AWQRILNRRSWAAYSWPKEYGGPDWTPAQRMIFLEENQLAPAPEVSSFNITMIGPVLI
                     QFGTEEQKQRFLPRAANIDDWWCQGFSEPGAGSDLASLKTAAKRDGADYVVNGQKIWT
                     STAHHADWCFCLVRTDPHAKKRQEGISFLLIDMKTPGITVRPIISIDGSHHLNEVFFD
                     DVRVPVSLRVGEENRGWDVAKFLLGHERTGIARLGKSKERVKFAREAAREMRANGKPL
                     IEDPAFRHRVAQLETDMKALEITQMRVVSAHDRSHDGKPDPLSSVLKVKGTELLQATT
                     ELAMDVGGPLAMPDWAQELAALSNEPELGPEWATEATRSYLFLRAASIYGGTNEIQKN
                     ILTKAVLGL"
     gene            1349..2485
                     /locus_tag="VNY79_10660"
     CDS             1349..2485
                     /locus_tag="VNY79_10660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007605330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX72953.1"
                     /translation="MDFDLTEEQRLLRDSVERLLADHYGFDKRRSYLAQPEGWSRGLW
                     AQYAELGLLGLPFPEDYGGFGGGPIEVMLVMEAFGRVLALEPYLATVVLGGTAMRLAG
                     GEEQKASMLPQIAEGELILAFAHGERQSRYDLTDVLTTAKPKGSGWVLDGAKSVVLHG
                     DSAQRLILSARNSGERDDPDGITLFLVNAASNGVARRAYPMRDGTRAAEISLSGVEVG
                     EEDVLGEVGAGFPVIERVVEAGIAATAAEAVGAMETMQAMTLEYLKTRQQFGRPIGQN
                     QVLQHRATEMLMELERGRSMAMLAAMMVEEPDPAERAHNIAMAKVGVGQASKFVSQNA
                     IQLHGGIGMTEEYAVGHYFRRCMVIEHTFGDTAHHLSRLAEQVR"
BASE COUNT          483 a          794 c          895 g          436 t
ORIGIN      
        1 cgataacaaa ggagccggag cgatggattt gcgcttcacc gccgatgaat tggcgtttcg
       61 cgacgaactg cgtaccttct tccgcgacaa cctgccgggt gacatccgcg agcggatgcg
      121 gctcggccac gcaccgacca aagacgacac cgtcgcttgg cagcgcattt tgaaccggcg
      181 cagctgggcc gcctatagct ggccaaagga atacggcggc ccagactgga cgccggcgca
      241 gcgcatgatc tttctcgagg agaaccagct ggcgccggcg cccgaagtct cgtcgttcaa
      301 catcacgatg atcggcccgg tgctgatcca gttcggcacc gaggaacaga agcagcggtt
      361 tctgccgcgc gccgccaata tagacgattg gtggtgccag gggttttccg aaccgggcgc
      421 ggggtcggac cttgcttcgc tgaagaccgc cgccaagcgc gacggcgccg attacgtggt
      481 caatggacag aagatctgga cctcgaccgc gcaccatgcc gattggtgct tttgtctggt
      541 gcgcaccgat ccgcacgcca agaagcggca ggaggggatc tcgtttctgc tgatcgacat
      601 gaagacgccg ggcatcacgg tgcggccgat catctcgatc gacggcagtc atcatctgaa
      661 cgaggtgttt ttcgacgatg tgcgggttcc ggtatcgctg cgcgtcggtg aagagaaccg
      721 cgggtgggat gtcgcaaagt ttttgctcgg ccacgagcgc accggaatcg cacggctcgg
      781 caaatcgaag gagcgggtca aattcgcccg tgaggcggcg cgcgagatgc gcgcgaacgg
      841 caagccattg atcgaggacc cggcgttccg ccaccgcgtc gcgcagctcg aaaccgatat
      901 gaaagccctg gagatcacgc agatgcgcgt cgtctcggcg cacgacagga gccatgacgg
      961 caagcccgat ccgctgtctt cggtgctcaa ggtcaagggc accgaactgt tgcaggcgac
     1021 gaccgagctg gccatggatg tcggcgggcc gctcgcgatg ccggactggg cgcaggaact
     1081 ggcggcgctc agcaacgagc cggaactggg cccggaatgg gcgaccgagg cgacccgcag
     1141 ttatctcttc ctgcgcgccg cctcgatcta tggcggcacc aacgagatcc agaaaaacat
     1201 actgaccaag gccgtgctgg gcctctagtc cccgtcatgg ccggacttga tccggccatc
     1261 cacgtgcccg acactggtcc ttccgcgccg gaggaggcgt ggatcaccgg gtcaagcccg
     1321 ttgatgacga tttgggtagg cggaggcaat ggatttcgat ctgaccgaag agcagcggct
     1381 gttgcgcgac tcggtggagc gactgcttgc cgatcattac ggctttgaca agcgccgctc
     1441 ctatctcgcc cagcccgagg gttggagccg cggcctctgg gcacaatatg ctgagctcgg
     1501 gctgttgggc ctaccatttc ccgaggatta cggcgggttc ggcggcggcc cgatcgaggt
     1561 gatgctggtc atggaggcgt tcgggcgggt tctcgctctg gaaccgtatt tggcgacggt
     1621 cgtgctgggc ggcaccgcaa tgcggctcgc cggcggcgag gagcagaaag cgtcgatgtt
     1681 gccgcaaatt gccgaaggcg aactgatcct cgcctttgct catggggagc ggcagtcacg
     1741 ttacgatctg acggacgtgc tgacgaccgc gaagcccaag ggcagcgggt gggtgctcga
     1801 cggcgccaag agcgtggttc tgcacggcga cagcgcgcag cggctgatcc tcagcgcgcg
     1861 caattcgggc gagcgggacg atcccgacgg catcacgttg tttctcgtga atgcggcaag
     1921 caacggcgtg gcgcggcgcg cctacccgat gcgcgacggc acgcgcgcgg cggagatttc
     1981 actgagcggt gtcgaggtcg gcgaggagga cgtattgggc gaggtcggag ccgggttccc
     2041 ggtcatcgag cgggtcgtcg aggcgggcat tgccgcgact gccgccgaag cggtcggcgc
     2101 gatggagacg atgcaggcga tgaccctcga atacttgaag acccgccagc aattcggccg
     2161 gccgataggc cagaaccagg tcctgcagca ccgtgccacg gagatgctga tggagctcga
     2221 gcgcgggcgc agcatggcga tgctggcggc gatgatggtc gaagaacccg atcccgccga
     2281 gcgcgcccac aacatcgcga tggcgaaggt cggcgtcggc caggcgagca agttcgtgtc
     2341 gcagaacgcg atccaactgc atggcggcat cggcatgacc gaggaatatg ccgtcgggca
     2401 ttatttccgc cgctgcatgg tcatcgagca caccttcggc gataccgccc accatctgtc
     2461 gcgcctcgcc gagcaagtgc gatagtggat cggtgagcac ccttttcgaa agccaggcgc
     2521 cgcatccgtt ggccgacctg ctgcgcccgc gcagcctggc ggaagtcgtc ggtcaggacc
     2581 acctgctcgc cgccgacggt ccgatcgg
//
LOCUS       DATMQB010000374         8970 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2965418, whole genome shotgun sequence.
ACCESSION   DATMQB010000374 DATMQB010000000
VERSION     DATMQB010000374.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8970)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8970)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8970
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2965418"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(12..686)
                     /locus_tag="VNY79_10665"
     CDS             complement(12..686)
                     /locus_tag="VNY79_10665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008840061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HWX72954.1"
                     /translation="MSSVLIIDDHPIVLQGCRRMLQDAGVAAVLEARDAVSGYRLYRR
                     HRPEVVIVDLAMQGSGLGGLPLIRRIRSHDPQARIMVLSMHSDPIIVSRALEAGATGY
                     VLKDTSSEDLLKAFAKVQAGTPYLSGDLAMQVALAHTSARQNPLAELTPRELQILSLL
                     AEGKPYGRIAEEINVSYKTVVNVSSQLKQKLKARNLPELIRTAVQLLQAAPIAKTSRP
                     DLEKLP"
     gene            complement(683..2164)
                     /locus_tag="VNY79_10670"
     CDS             complement(683..2164)
                     /locus_tag="VNY79_10670"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HWX72955.1"
                     /translation="MPQSSPRQRRRFLHALWYGRSVRTQLLLVFVLIDLAAALVAGSV
                     TIWRARTQTRIEMAASIRLAELLVGDAVNLVHQQLPAEQFLAVLPAQLRSLRHVRIAV
                     KDAAGIPIAAAPSAVAAVGRGSADGRRSDERAPAPAWFAALVAPPLETHVVPVAADGH
                     RVGQVEITGEPADEIAETWENAVAIGAGALLLNVAMIGVLYVLFGRVLGPLTVLASGL
                     SELEQQTYSVRLPRPPARELAAIADHFNALALALETVRAENLRLNRRLITAQDDERRR
                     TALELHDEVGPCLFGLKANASSIASAAGELPDKAKQSVSERLHDMLAIIEHLQAINRT
                     MLDRLRPMALGHVPLRELVDQLVRERSRQHPQMTFTLAAENVRRSYGDSIDLTVFRCV
                     QESLTNAIRHAQAKKVTVQLGQAEDEAQLELSVRDDGRGVAPGAPPGFGIRGMQERVE
                     GLGGRFTIESASGGGTCVRVAVPLLEHRSAPSLVADAGDGAQA"
     gene            2397..3014
                     /locus_tag="VNY79_10675"
     CDS             2397..3014
                     /locus_tag="VNY79_10675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease D"
                     /protein_id="HWX72956.1"
                     /translation="MTIRVHRGDLPDLARYASGAVAIDTETMGLNLGRDRLCLVQLSP
                     GDGSADVVQIPANAGGAPNLRRLLADENLLKIFHFARFDLAVLYEAFGVMPQPIYCTK
                     IASRLARTYTDKHGLKDLVREVLGHELSKQQQSSDWGAADLTDAQISYAAADVIYLHA
                     LKERLDAMLAREDRGALAAACFRFLPDRVRLDIAGFAGEDVFAHS"
     gene            3144..3836
                     /gene="lptC"
                     /locus_tag="VNY79_10680"
     CDS             3144..3836
                     /gene="lptC"
                     /locus_tag="VNY79_10680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter periplasmic protein
                     LptC"
                     /protein_id="HWX72957.1"
                     /translation="MSTVYPAGVASAAAFSASSRGDIGRTYRVALRHSRYVRWLRLSV
                     PAGIAAVLFMVVAANYMPPIGGFRLPGELGKLVIKGTKITMQQPRLTGFTNDSRSYEF
                     TANAAAQDITKPDLVELNKPHAKVQMQDKSMVTMSAVSGIYNMKTEMLTLSEDINLVS
                     STGYEGRLSEAVIDVRKGSVVSEKPVWVKLLNGFLNARRLEVVENGAVVRFGGVAMTI
                     LPDKNPTKAEEP"
     gene            3878..4522
                     /locus_tag="VNY79_10685"
     CDS             3878..4522
                     /locus_tag="VNY79_10685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LptA/OstA family protein"
                     /protein_id="HWX72958.1"
                     /translation="MPGAAAGQNPVQGSAAQSPAQGAAAQSPLQGALQSQNKDQPIHI
                     EAATLEVHDKAKTATFSGNVQVVQGDTTMRCRSLVVFYGAEEGAGTAKPAAARPVAEG
                     PATPGMPQGAQSIRRIEARGGVTVVTKDQNASGELGVYDLKTKTITLTGNVVVSQGKN
                     VLHGERVVVDTATGNARVESGATAHDRVRALIQPGKGANGTPTNVMSFGQGHPN"
     gene            4717..5709
                     /gene="lptB"
                     /locus_tag="VNY79_10690"
     CDS             4717..5709
                     /gene="lptB"
                     /locus_tag="VNY79_10690"
                     /EC_number="7.5.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009898 - cytoplasmic side of plasma
                     membrane [Evidence IEA];
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_function: GO:0015221 - lipopolysaccharide transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0015920 - lipopolysaccharide transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LPS export ABC transporter ATP-binding protein"
                     /protein_id="HWX72959.1"
                     /translation="MGGTINGTYVDIASAPARDDKARNKTVARPPRPPPQPSQLPPQN
                     EPRPQPPRQPPPPPPQNERPQPQYEARAPARTTPRAEGNGAAPASRGGFLSVHGVEKS
                     FVGRKVVKGVSLYVRKGEAVGLLGPNGAGKTTVFYMMTGLIRADKGRIQLDGYDVTGL
                     PMYQRARLGIGYLPQEASIFRGLNVEENIRAVLEVVEPSAKRRERDLNALLEEFNIAR
                     LRKTPAIALSGGERRRVEIARSLATRPNYMLLDEPFAGIDPIAVGDIQSLVRHLTNRG
                     IGVLITDHNVRETLGLTDRAYIIYSGDVLMEGRADEIVNNPDVRRLYLGEEFRL"
     gene            5817..7343
                     /gene="rpoN"
                     /locus_tag="VNY79_10695"
     CDS             5817..7343
                     /gene="rpoN"
                     /locus_tag="VNY79_10695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016987 - sigma factor activity [Evidence
                     IEA];
                     GO_process: GO:0006352 - DNA-templated transcription
                     initiation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HWX72960.1"
                     /translation="MALTQRLQIRQSQALVMTPQLMQAIKLLQLSNLDLVAYVEAELE
                     RNPLLDRSAEDERPADKPGDATAAPDEPSARGEAWNEGEGPSNGHAIDERLDISADDV
                     FPDDAAPSRPRTSELPAGYSEWAAVGTGGRDDGDYNLEAFVSAETTLADWLREQLTLA
                     VADPARRMIGFYLIDLVDEAGYLGGDLAAVAEKLGTAITEVETVLGIVQGFDPPGIAA
                     RDLAECLALQLKERDRFDPAMEALITRLDLLARRDFAVLRKICGVGDEDLADMIAEIR
                     RLNPKPGLAFGSAVVQPIVPDVFVRPGPDGGWIVELNSDTLPKVLVNQSYYAEVSATT
                     RRDAEKSYLVDCLQNATWLVRALDQRARTILKVANEIVRQQDGFFARGVQHLRPLNLK
                     TVAEAIGMHESTVSRVTANKYMATSRGIFELKYFFTSAIAAAHGGEAHSAEAVRHRIK
                     QLIDAESAAEVLSDDTIVDKLRAAGIEIARRTVAKYREAMRIPSSVQRRREKQAAAVT
                     "
     gene            7451..8041
                     /gene="raiA"
                     /locus_tag="VNY79_10700"
     CDS             7451..8041
                     /gene="raiA"
                     /locus_tag="VNY79_10700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014490899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005840 - ribosome [Evidence IEA];
                     GO_component: GO:0022626 - cytosolic ribosome [Evidence
                     IEA];
                     GO_function: GO:0045182 - translation regulator activity
                     [Evidence IEA];
                     GO_process: GO:0009386 - translational attenuation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HWX72961.1"
                     /translation="MPFRVSGKNIDVGEALRGRINDRITEAMGKYFDGGYSGHVTVAR
                     EGFGFRTECAIHLDSKITLHAEGQAADAYASADQAALRVERRLRRYHRRLKEHRSERL
                     DGRAALEAASYIIAAPEQDSEADLDGFTPVIIAESTTMLKQLSVSDAVMELDMTGAPV
                     LVFRHAAHGGINIVYRRADGHFGWIDPPAPAVPEAH"
     gene            8118..8579
                     /gene="ptsN"
                     /locus_tag="VNY79_10705"
     CDS             8118..8579
                     /gene="ptsN"
                     /locus_tag="VNY79_10705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008982 -
                     protein-N(PI)-phosphohistidine-sugar phosphotransferase
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA];
                     GO_process: GO:0009401 - phosphoenolpyruvate-dependent
                     sugar phosphotransferase system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PTS IIA-like nitrogen regulatory protein PtsN"
                     /protein_id="HWX72962.1"
                     /translation="MPLTDLVAPNAIIPALKVNNKKQALQELAARAAVLSGQNERAIF
                     DILMQREKLGSTAVGNGIAIPHGKMPNLTRLFGLFARLDRPVDFEALDGLPVDLIFLL
                     LAPEGAGADHLKALARVARLLRDSAIARKLRASHDAEALYAVLAMPSASAA"
     gene            complement(8833..>8970)
                     /locus_tag="VNY79_10710"
     CDS             complement(8833..>8970)
                     /locus_tag="VNY79_10710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1150 family protein"
                     /protein_id="HWX72963.1"
                     /translation="VPEIQPGLKLFALHAADGTPIMLTDSREAAVANAMSQQLETVSV
                     H"
BASE COUNT         1588 a         2964 c         2966 g         1452 t
ORIGIN      
        1 cggcctcggc gttagggaag cttttccaaa tccggccggg aagttttggc aatcggcgcc
       61 gcctgcagca gctgcacggc cgtgcggatc agctccggca ggttgcgggc cttgagtttc
      121 tgcttgagct gggagctgac gttgaccacg gtcttgtagc tgacgttgat ctcctcggcg
      181 atgcggccat agggcttgcc ttcggccagc aacgacagga tttgcagctc ccgcggtgtc
      241 agctcggcaa gcgggttctg ccgcgcagag gtgtgcgcca gcgcgacctg catggcgagg
      301 tcgccgctca gatagggcgt cccggcctgg accttggcga acgccttgag caggtcctcc
      361 gacgaggtgt ctttgagcac gtagccggtg gcgccggcct cgagcgcacg cgaaacgatg
      421 atcgggtcgc tgtgcatgct cagcaccatg atgcgcgcct ggggatcgtg cgaacggatg
      481 cgtcggatca gcggcaggcc gccgagcccg ctgccctgca tcgccagatc gacgatcacg
      541 acctccgggc ggtggcggcg gtagagccgg tagcctgaga cggcatcgcg ggcctcgagc
      601 acggcagcga cgccggcgtc ctggagcatg cgccggcaac cctggagcac gatcgggtgg
      661 tcgtcgatga tgaggacgct gctcatgcct gggcaccgtc gccggcatcc gccacgagcg
      721 agggtgcgct tcggtgctcg agcaggggaa cggcgacacg cacacaggtg cccccgccgg
      781 acgcgctctc gatcgtgaaa cggccgccca gaccctcgac ccgctcctgc atgccgcgaa
      841 tgccgaaacc gggcggtgcg ccgggggcca ccccgcggcc gtcatcgcgc acgctgagtt
      901 cgagctgcgc ctcgtcttcg gcttgcccga gttggacggt cacttttttc gcctgcgcgt
      961 gccgaatggc gttggtcaga ctttcctgta cgcagcggaa gacggtgagg tcgatcgaat
     1021 cgccgtagct gcggcgcaca ttttcggcgg cgagggtgaa tgtcatctgt gggtgctgac
     1081 gtgaacgctc gcgcacgagc tggtcgacaa gctcccggag cgggacatgg ccgagtgcca
     1141 tcggccgcag gcggtcgagc atggtgcggt tgatggcctg caaatgctcg atgatcgcga
     1201 gcatgtcgtg caagcgctcc gatacgctct gcttcgcctt gtccgggagt tcgccggcgg
     1261 cgcttgcaat cgaggaggca ttggccttca ggccgaacag gcaagggccg acctcgtcat
     1321 ggagttcgag cgcggtgcgc cgcctttcat cgtcctgcgc cgtgatcagc cggcgattga
     1381 gccgcaggtt ttccgcacgc accgtttcga gcgcaagcgc gagcgcattg aaatggtcgg
     1441 cgatggccgc caactcgcgc gccggagggc gtggcagtcg cacgctgtag gtttgctgct
     1501 cgagctcgga gaggccgctc gccagcacgg tgagcgggcc gagcacgcgg ccgaacagga
     1561 catagagcac gccgatcatc gcgacattaa gcagcagggc cccggcgccg atcgcgacgg
     1621 cgttttccca ggtctcggcg atttcgtcag ccggctcgcc ggtaatctcc acttggccta
     1681 cgcggtggcc gtcggcggcg accggcacga catgcgtctc gagcggcggc gcgaccaggg
     1741 cagcgaacca ggccggcgcc ggtgcgcgtt cgtcagacct gcggccgtcc gcgctgccgc
     1801 ggccgacggc cgccacggcg ctcggcgccg cggcaatggg aatgcccgct gcgtccttga
     1861 ccgcgatccg cacatgacgc agcgagcgca actgcgccgg cagcaccgcc aggaactgct
     1921 cggcggggag ctgctggtgt acgagattga cggcatcgcc gacgagcaac tcggcgaggc
     1981 ggatcgatgc agccatctcg atgcgggtct gcgtgcgggc gcgccagatc gtaacactcc
     2041 cggcgacgag cgcggctgca aggtcgatca gaacaaatac cagcagcagc tgggtgcgaa
     2101 ccgagcgccc ataccacaac gcatgcagga accgccgccg ctggcgcggc gacgattgcg
     2161 gcatcgcgaa cgcgctggaa actgaatgcg cgctgatgat cgtcctcccg gactgcccga
     2221 agcccgtgtc aatctagcgg aacatgcgcg ccgctgtcac ttgtgggccg gattccgtag
     2281 gcaaatcgcc caaatcgagc ggattttgac ggacaatttc ggttacgata ttcagcattg
     2341 caccgacgat accaatcttg ccgaggcatc acgttgcaaa ccaatcatag caccgcatga
     2401 ccatccgcgt ccatcgcggc gatctgccgg accttgcgcg ctatgccagc ggcgcggtgg
     2461 cgatcgacac cgaaaccatg gggctcaatc tcggccgcga ccggctatgc ctggtccagc
     2521 tgtcacccgg cgatggatcc gcggacgtgg tgcagatccc ggcgaacgct ggcggcgcgc
     2581 ccaatttgcg gcgactcctt gccgacgaga acctgctcaa gatttttcac ttcgcgcgct
     2641 tcgaccttgc cgtgctctac gaggctttcg gggtgatgcc gcagccgatc tattgcacca
     2701 agatcgcttc gcggctcgcg cgcacctaca ccgacaagca cggcctcaag gacctcgtgc
     2761 gcgaggtgct cggtcatgag ctttccaagc agcaacaatc atccgattgg ggagcggcgg
     2821 acttgactga cgcgcagatt tcctatgccg cggccgacgt gatctatctg catgcgctca
     2881 aggagcggct cgacgccatg ctggcccgcg aagatcgtgg agcgctggcc gcggcgtgct
     2941 tccggttcct gcccgatcgg gtgcggcttg atatcgccgg ctttgccggc gaggacgtgt
     3001 tcgcccattc ctagcggcgg cgcccaggcg ttccccagcg cggccccgcc ggagccatat
     3061 tcgcaggcga caaacagccg cccgaaccgc taaaatcggg gggcccgcgg cccgaatcag
     3121 ggcgcggtcc gagggacaaa ggcttgagca ccgtctatcc cgccggcgtc gcgagcgcgg
     3181 ctgcgttttc ggcgagttct cggggcgaca tcggacggac ctatcgggtg gcgctgcggc
     3241 acagccgcta cgtgcgctgg ctccgcctca gcgtgcccgc cggcatcgcc gccgtgctgt
     3301 tcatggtcgt cgcggccaac tacatgccgc cgatcggggg gtttcgcctg ccgggggaac
     3361 tcggcaagct cgtgatcaag ggcaccaaga ttaccatgca gcagccgcgg ctcactggtt
     3421 tcaccaacga ttcccgctcc tacgaattca ccgccaatgc cgccgcgcaa gacatcacca
     3481 agcccgatct ggtggaactg aacaagccgc atgccaaggt ccaaatgcag gacaagagca
     3541 tggtcacgat gtcggccgta tccggcatct acaacatgaa gacggaaatg ctgacgctga
     3601 gcgaggatat caatctcgtt tcctcgaccg gctatgaagg ccgtttgagc gaggccgtga
     3661 tcgacgtgcg caaaggcagc gtggtttccg agaagccggt ctgggtgaag ctgctcaacg
     3721 ggttcctcaa tgcgcgacgg ctggaggtcg tcgaaaacgg cgccgtggtc cgtttcggcg
     3781 gcgtcgcgat gacgatcctg cccgacaaga atccgacaaa ggctgaggaa ccatgatgtc
     3841 tcggctttgg ctcctcgccg cgatcgtggc cttggccgtg ccgggagcgg cggcggggca
     3901 gaacccggtt cagggttcgg cagcgcagag cccggctcag ggggcggcag cgcagagccc
     3961 gcttcagggc gcgcttcaga gtcagaacaa ggatcagccg atccacatcg aagcggcaac
     4021 gctcgaggtg cacgacaagg ccaagacggc gaccttctcc ggcaacgtcc aggtggttca
     4081 gggcgacacc acgatgcgtt gccgaagcct ggtcgtgttc tacggggctg aggaaggcgc
     4141 gggcaccgcc aagccggcgg ctgcgcgtcc cgttgcagag ggcccggcca cacccgggat
     4201 gccccaggga gcgcaaagca tccgcaggat cgaagcgcgc ggcggggtca ccgtggtcac
     4261 caaggatcaa aatgcgagcg gtgaactcgg tgtctacgat ctgaagacga aaacgatcac
     4321 gctgaccggc aacgtcgtcg tcagccaggg caagaacgtc ctccatggcg agcgggtcgt
     4381 cgtcgacacc gcgaccggga acgcgcgggt cgaatccggc gcgacggctc acgaccgtgt
     4441 gcgggcgctc attcagcccg gcaagggcgc caacggcacc ccgaccaatg tcatgtcgtt
     4501 tgggcaaggg cacccgaatt gagggcgccg ctgccggcat cagggcggga aatcggctag
     4561 agtaccccgc gaaggaaccc tgcgcgattc gcagccgaaa gtcccgatac tggcgtgccc
     4621 gacatcctct catattttcg ccggcgcccg accccggcac cagccccggg gcatcgcaaa
     4681 ccgaccgcgg gggatggagc catcgacctc gcgagcatgg gcggcaccat aaacggcacc
     4741 tatgtcgaca tcgcgagcgc gccggcgcgg gacgacaagg cccgcaacaa gaccgtggcg
     4801 cggccgccgc gcccgccgcc ccagccctcc cagctgccgc cgcagaatga accgcgcccg
     4861 cagccgccgc gtcagccgcc cccgccgccc ccgcaaaatg agcgcccgca gccccaatat
     4921 gaggcccgtg cgccggcgcg gacaacgccg cgcgcggagg ggaacggcgc tgcgccggcg
     4981 agccgcgggg gctttctctc cgtccacggc gtggagaaga gcttcgtcgg gcgtaaggtc
     5041 gtcaagggcg tgagcctcta cgtgcgcaag ggcgaggccg tgggcctgct cggccccaac
     5101 ggggccggca agaccacggt cttctacatg atgaccgggc tcatcagggc cgacaaaggg
     5161 cgcatccagc tcgacggcta cgacgtgacc ggcctgccga tgtatcagcg cgcccgcctc
     5221 ggcatcggct acctgccgca agaagcttcg atcttccgcg gcctcaatgt cgaggagaac
     5281 attcgcgcgg tgctcgaagt ggtcgagccg agcgccaagc ggcgcgagcg tgacctcaat
     5341 gcgttgctcg aggaattcaa cattgcgcgg ctgcgcaaga cgccggcgat cgcgctctcc
     5401 gggggcgagc gccgccgcgt cgagattgcc cgctcgctgg ccacgcggcc gaactacatg
     5461 ctgctcgacg aaccgtttgc cgggatcgac ccgatcgccg ttggcgacat ccaatcgctg
     5521 gtgcgccatc tgaccaatcg cggcatcggc gtgctcatca ccgaccacaa tgtccgcgaa
     5581 acgctcggcc tgaccgaccg cgcctacatc atctactccg gcgacgtcct gatggaggga
     5641 cgggccgacg agatcgtcaa caatcccgat gtgcgccggc tctaccttgg cgaggaattc
     5701 cggctttaac cctgcgcctc ctatttcccg cgaacggcag ggaaggggga gacagcgccg
     5761 ccggattgcg gtagagcaat acaagcaaga aacggaccaa ttcagtctag ctttcgatgg
     5821 cactcaccca aagactccag atccggcaga gccaggcgct ggtgatgacg ccgcagctga
     5881 tgcaggcgat caagctgctg cagctctcca atctcgatct ggtcgcctat gtcgaggccg
     5941 aactcgagcg caatccgctg ctcgaccgga gtgcggaaga cgaacggccg gcggacaagc
     6001 cgggcgacgc cacggcagcg ccggacgagc cgtccgcacg cggcgaagcg tggaacgaag
     6061 gtgaaggtcc gtccaacggc cacgccatcg atgagcgcct cgatatctcc gccgacgacg
     6121 tcttccccga cgacgcggcg ccaagccgcc cgcggacctc agagcttccg gccggatatt
     6181 ccgaatgggc ggcagtcggc accggcggcc gcgatgacgg cgattacaac ctcgaagcgt
     6241 tcgtctccgc cgagaccacg ctggcggact ggttgcgcga gcagcttacg cttgccgtag
     6301 ccgacccggc gcggcggatg atcggctttt atctcatcga tctcgtcgac gaggccggct
     6361 atcttggcgg cgatcttgcg gcggttgcgg aaaagctcgg caccgccatc accgaggtcg
     6421 agacggtgct cggcattgtg cagggcttcg atccgccggg cattgccgcg cgcgacctcg
     6481 ccgaatgcct ggcgttgcag ctcaaggagc gcgaccgctt cgatccggcg atggaagcct
     6541 tgatcacgcg cctcgatctc ctggccaggc gcgatttcgc ggtcctcagg aaaatctgcg
     6601 gcgtcggcga tgaggatctc gccgacatga tcgcggaaat ccgccgtctc aatccgaagc
     6661 ccggtctcgc cttcggctcg gcagtcgtgc agccgatcgt gccggatgtc ttcgtgcggc
     6721 cgggcccgga cggcggctgg atcgtcgaac tcaattccga cacgttgccg aaggtgctgg
     6781 tcaatcagag ctactatgcc gaggtctcgg ccacgacgcg gcgcgacgct gaaaagtcgt
     6841 accttgtcga ttgcctgcag aacgccacct ggctggtgcg cgcgctcgat cagcgcgccc
     6901 gcaccattct caaggtcgcc aacgaaatcg tgcgccagca ggacgggttc tttgcccgcg
     6961 gcgttcagca tctgcgtccg ctcaatctca agaccgtggc tgaagccatc ggcatgcacg
     7021 aatcgacggt ctcgcgcgta accgccaaca aatacatggc gaccagccgc ggcatcttcg
     7081 agctcaaata tttcttcacc tcggcgatcg ccgccgccca tggcggtgaa gcccactccg
     7141 ccgaggcggt gcgccaccgc atcaagcagc tgatcgacgc cgagagcgcc gccgaggtgc
     7201 tgtccgacga caccattgtc gacaagctgc gcgcggccgg catcgagatc gcgcggcgga
     7261 ccgtagcgaa atatcgcgag gcgatgcgca ttccttcctc ggtgcagcgg cggcgggaga
     7321 aacaggcggc ggcggtcacc tgatgcatca gcgccgggcg caaagggctt cgttgactcc
     7381 gcgtcggccc atgcctagct cggaggcacg ggtgcaaaac gtaagcggag accgataagc
     7441 ggagaccgac atgccgtttc gcgtttcagg taagaacatc gacgtcggcg aagcgttgcg
     7501 ggggcgcatc aacgaccgaa tcaccgaagc gatgggcaag tatttcgacg gcggctattc
     7561 gggtcacgtc accgtggcgc gcgagggctt cggctttcgc accgaatgcg ccatccatct
     7621 tgattcgaag atcacgctgc acgccgaagg ccaggcggcc gatgcctatg ccagcgccga
     7681 tcaggcggcg ttgcgggtgg agcggcggct gcgccgctat catcgccggc tcaaggagca
     7741 tcgttccgag cgtctcgacg gccgcgccgc gctcgaggcg gcgagctaca tcatcgctgc
     7801 tccggagcag gacagcgaag cggacctcga cgggttcacg ccggtgatca tcgcggaatc
     7861 gaccaccatg ctgaagcaat tgtcggtcag cgatgcggtg atggaactcg acatgaccgg
     7921 cgcgcctgtt ctcgtcttcc gccacgccgc gcacggcggc atcaatatcg tctatcggcg
     7981 cgccgatggg catttcggtt ggatcgatcc gcccgcgccg gcagtgccgg aagcccattg
     8041 acggcgctat ggaccctccc tatggtccgc cgcctttagc gaccggccgc ggcggctccg
     8101 cttcccaggt tccatcgatg ccactcaccg atctcgtcgc gccgaacgcg atcatcccgg
     8161 cgctcaaggt caacaacaag aagcaggcgc tgcaggagct cgccgcgcgc gcggctgtgc
     8221 tcagcggtca gaacgagcgt gcgatcttcg acatcctgat gcagcgcgag aagcttgggt
     8281 ccaccgcggt cggcaacggc atcgccatcc cgcacggcaa gatgcccaac ctcacgcggc
     8341 tgttcggttt gttcgcgcgg ctcgaccggc cggtcgattt cgaagcgctc gacggcctgc
     8401 cggtcgatct catctttctg ctgctagcgc cggaaggcgc cggcgccgat catctgaagg
     8461 ctctggcgcg cgtggcgcgc ctgctgcgcg actcggccat cgcccgcaag ctgcgcgcat
     8521 cgcatgacgc ggaagcgctc tacgccgtgt tggcgatgcc gtcagcgtcc gccgcctagc
     8581 agctgtcagg tatcaggtgg gatcagcatc gcgcatcata gatgcgcgac accctcgggt
     8641 cggctcagcg atagtcgcta cgagtgcggg accggtttgg cgatttgtac ggggcgtcat
     8701 tgcgaggagc gcagcgacga agcaacccat agttcaggtc caatgcgcga aagattggat
     8761 cgcttcgcgg gcttgtcatc gggtccggcc actttgggcc ggacccgatg gctcgcaatg
     8821 acgaatctcc gatcagtgca cgctcaccgt ctcgagctgt tggctcatgg cgttggcgac
     8881 ggcagcctca cggctgtcgg tcagcatgat cggcgtgccg tcggccgcgt gcagggcgaa
     8941 cagcttcagc cccggctgaa tctccggcac
//
LOCUS       DATMQB010000375        18503 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_793383, whole genome shotgun sequence.
ACCESSION   DATMQB010000375 DATMQB010000000
VERSION     DATMQB010000375.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 18503)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18503)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18503
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_793383"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..800)
                     /locus_tag="VNY79_10715"
     CDS             complement(<1..800)
                     /locus_tag="VNY79_10715"
                     /inference="COORDINATES: protein motif:HMM:NF015366.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tripartite tricarboxylate transporter
                     substrate-binding protein"
                     /protein_id="HWX72964.1"
                     /translation="MLLRRTFLNLAAGAAALPLAARITRAETYPARPVRLLVGYAPGG
                     VTDIAARVMGGWLSERLGQQFVVENRPGASSNIATGMVVRAAPDGYTLLLASTSNAFN
                     AALYDRLDFNFIHDLAPVASIARDAFVLVAHPAFAPKTVPELIAYAKANPGKVNMGTS
                     GPASASALFSELFKVMAGVDLFTVHYRSIGPGLPDLMSGRVDVMVAPVASVVAYIKDG
                     KLVPLGVTNAERVHALPDVPSIGEFVQGYEGTGWVGIVAPAKTPPEIVA"
     gene            922..1959
                     /locus_tag="VNY79_10720"
     CDS             922..1959
                     /locus_tag="VNY79_10720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018330152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HWX72965.1"
                     /translation="MLFRQLFDQTSGTYSYLMASRRGGEALIIDPVLEKVDRYLQLVR
                     ELDLKLVKAVDTHMHADHITGLGALRDKTRCTTVMGEQTKADVVSIRLTDGDKLTIEG
                     LALDVLYTPGHTDDSYSFLLADRVFTGDTLLIRGTGRTDFQNGDPRAQYDSIFNKLMK
                     LPDETLVYPAHDYKGESVSTIGEEKNFNPRLRVKSIDEYVDLMNNLKLPNPKMMDVAV
                     PANMRVGLRQEEIARKGWALSAAEAMAMRGRNDVALIDLREKNEREKHGVIPGSLHAP
                     YPDLAENISAGGMLHELAEATGKRIVFYCAYGERSAMAVQAAQDAGLKTACHIEGGVN
                     AWKKANGPLAR"
     gene            complement(2098..2778)
                     /locus_tag="VNY79_10725"
     CDS             complement(2098..2778)
                     /locus_tag="VNY79_10725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HWX72966.1"
                     /translation="MLKPVVAAAVLAIAGSSFVYAQQRSGEPDFDGGPCSWQHPLPSV
                     GDVRAFADARIAALKAGLQLTPEQEKNWGPFEQALRDLVKLRIDRIQERETGEQPPPA
                     NFFDRLQRRADAMAQFGGALKHVAEAGGPLYQSLDDAQKHRFKILARMVRPHNMAGGW
                     WWRGEPDGDDHGRGGNFERHGEGPDGMMSPDGDEGGSHRMMGRSGPDGGRHGMTTDGE
                     RDEDSSDL"
     gene            complement(2939..3715)
                     /locus_tag="VNY79_10730"
     CDS             complement(2939..3715)
                     /locus_tag="VNY79_10730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HWX72967.1"
                     /translation="MAQGRDDVGAPAPPAEVAVEVLGLHKWYGEFHVLRDINLKVARG
                     ERIVICGPSGGGKSTLLRCINRLEDWQRGRIIVDGIELTEDPKRILAVRRDVGMVFQQ
                     FNLFPHLTVLENCTLAPLWVRHMPRREAEALAMKYLERVKIPGQASKYPARLSGGQQQ
                     RVAIARALCMNPNIMLFDEPTSALDPEMVKEVLDTMVELATDGITMLVVSHEMGFARQ
                     VADRMIFMDEGQIVEINAPQSFFDHPQHERTRLFLQQILH"
     gene            complement(3725..4879)
                     /locus_tag="VNY79_10735"
     CDS             complement(3725..4879)
                     /locus_tag="VNY79_10735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009492609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0006865 - amino acid transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HWX72968.1"
                     /translation="MAAVSDEPFAYVRRLPAERLPPPLAATGALGWLRANLFSSPANI
                     ALTLLCVLFIAWAIPPLVRFFLIDAVWSGADREACLATPEHPAVGACWAFVRVWFSYF
                     VYGFYPAGQRWRVDLFFIALAFGIVWLLRLSAPRRDLGALYFFVVLPVLSFVLLHGAP
                     PIGLAVVPTALWGGMLVTVIVATVGIVFSLPLGILLALGRRSDLPVVRLLSVIFIEFV
                     RGVPLITVLFMASVMLPLFVPDRLAPDKLVRALVGVAMFASAYMAEVVRGGLAAVPRG
                     QYEAARALGFTYWRMTGLVILPQALRVTLPNIVNTFIGLFKDTTLVFVVGIFDFLRTI
                     EAARADPHWGAPTTPITGYAFAALFYFVCCYGMSRYARSVEARLARAGRR"
     gene            complement(4885..6057)
                     /locus_tag="VNY79_10740"
     CDS             complement(4885..6057)
                     /locus_tag="VNY79_10740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018390554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HWX72969.1"
                     /translation="MADEAQTGARYRRRIASIAVQVGLIVLIGGLVYAAAYNAAHNLA
                     RAHIASGFGFWNNTAGFDISQTLIPYSAAASTFGRAFWVGLLNTLLVAAIGIVLATVL
                     GFAVGIARLSRNWLVARLAAGYVEVIRNVPLLLQLLFWYNAVLKSLPEVQGSVALPGG
                     GFLNNRGLFLPRPEFASGFSAVLAAFLAGVFAVIVLRLWARRRQERTGAEIHMFWPAL
                     ALLCALPIIAAAVTGAPLTFSPLHMGRFNVRGGIEILPEFAALTLALTTYTAAFIAEV
                     VRAGVLSVSAGQTEAAQALGLRSGATLRLVIVPQAMRVIIPPLTSQYLNLIKNSSLAV
                     AIGYPDLVQVFAGTVLNITGQAVEVVAITMAVYLAISLFASALMNLYARTTSVVEH"
     gene            complement(6098..7114)
                     /locus_tag="VNY79_10745"
     CDS             complement(6098..7114)
                     /locus_tag="VNY79_10745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0055052 - ATP-binding cassette (ABC)
                     transporter complex, substrate-binding subunit-containing
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HWX72970.1"
                     /translation="MKRLATALAFATVLAFGMQAASAQTLTTIKNRGELICGANGTLA
                     GFGLPDPQGNWTGFDVDFCRAIAAAIFNDPTKVKFVPLTAKDRFTALQSGEIDVLSRN
                     TTWTLSRDTSLGLDFVAVTYYDGQGFMVRRALKVNSALELNGAAVCVQQGTTSELNLA
                     DYFRANQMQLKTVTFATGDEARKAYESGRCDAYTTDSSGLYGERQKLAVPGDHIVLPE
                     IISKEPLTPAVRHGDSQWTDIVRWTHFAMVDAEELGVTKANVDEKLKSDDPETRRMLG
                     AEGQYGEALGLTNDWVYRIVKHVGNYGEVFERNIGQGSPLKIVRGLNALWTKGGLQYG
                     PPFR"
     gene            7348..8547
                     /gene="metC"
                     /locus_tag="VNY79_10750"
     CDS             7348..8547
                     /gene="metC"
                     /locus_tag="VNY79_10750"
                     /EC_number="4.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004121 - cystathionine beta-lyase
                     activity [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HWX72971.1"
                     /translation="MNDSNNDDRPPRRPGTRVVTGGRDPASFHGFVNPPVYHASTVLY
                     RSAADYVAHRSRYQYGRRGTPTTEALELALQELEGPQCAGVALLPSGLAAISAALLSV
                     VHAGDHVLVTDSVYGPTRTFCDQILTRLGVTTTYYDPLAGAAVAALMQENTRAVYLES
                     PGSLSFEMQDVAAIAGAAHARGALVLMDNTWASPIYFRPFDHGVDLAIQAGTKYIGGH
                     SDVMLGTVSANGRTVKDLKNMVGLNGWCVGPDDVYLGMRGLRTLAVRLDRHYESGLAV
                     ARWLEQRPEVMRLLHPAMASHPGHALWKRDFTGASGLFSVVLKPVRQKAVYAFLDTLE
                     LFGIGPSWGGYESLATPFNCAPARTATRWEPGGPTVRFHIGLEALEDLIADLERGFAA
                     LAANADE"
     gene            complement(8584..8916)
                     /locus_tag="VNY79_10755"
     CDS             complement(8584..8916)
                     /locus_tag="VNY79_10755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipid-A-disaccharide synthase N-terminal
                     domain-containing protein"
                     /protein_id="HWX72972.1"
                     /translation="MLVDLSREVGAYLQDVFITRLDWWVLLGFIAQGMFTMRFLVQWI
                     ATERAGHSVIPLGFWIFSIAGGLLLLVYALYRKDPVFIAGQAFGVFVYLRNLHFVMRD
                     RKAAATPA"
     gene            complement(8906..9655)
                     /locus_tag="VNY79_10760"
     CDS             complement(8906..9655)
                     /locus_tag="VNY79_10760"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008130888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HWX72973.1"
                     /translation="MLQRNDSGPAVSVVVPVRNEAGNVAPLVAEIAAALAGRVFEILY
                     VNDGSRDGTEQELRGLMTLRPWLRQLRHAQSCGQSAAVRSGVIAARAAVVVTLDGDGQ
                     NDPAFIPALLAALEQGAPQIGLVAGQRVGRKATGFKRWQSRTANAVRDAVLKDGTRDT
                     GCGLKAFRRDLFLALPYFDGLHRFLPALVRREGYDVGYVDVVDRPRRHGTSNYGLWDR
                     LWVGILDLAGVWWLIRRRRRVPECEEVTLAR"
     gene            complement(9689..10555)
                     /locus_tag="VNY79_10765"
     CDS             complement(9689..10555)
                     /locus_tag="VNY79_10765"
                     /inference="COORDINATES: protein motif:HMM:NF013718.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HWX72974.1"
                     /translation="MNSAQVKSEGTKQGAAALPSRIVANFALAVVALARPPRAKLPAP
                     PRRAVAAVLLLTCMAIIASMFVLDRTASDWARHLPGWFIEAFERITDFGLSGWFLYPL
                     GVILLGLAAVASPASPRLAQGVFAALGARFGFLFVAIAAPGLFTTIVKRLIGRARPYV
                     GGYDNPFLYKPFIWQPAYASMPSGHATSAAAAAVAIGAVWPRARPLMWLYALTIMFSR
                     VVVVAHHPSDVLAGALVGAVGVLLLRRVFAARRLAFSPRDLRPYPWPSWRRFKAAARR
                     RGASAPAPPTAD"
     gene            complement(10561..12285)
                     /locus_tag="VNY79_10770"
     CDS             complement(10561..12285)
                     /locus_tag="VNY79_10770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018457783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HWX72975.1"
                     /translation="MSTGGSAASWTLWPANSLAAVFDFAASSNRRALAVLAIVSLIAF
                     VPGIFQIPPVDRDEARFAQATKQMIETGDYVDIRFQDEVRYKKPVGIYWLQAAVVKTA
                     EAVGVPRARTRIWLYRMPSLAGAVGAVLATYWCALAFVGRRGAALAALMMLGSTMLGV
                     EARLAKTDAMLLLAVVAAMGAMARVYLFPGGARPPPREWALVAVFWTALAVGILLKGP
                     LIVMIVGLAAAALSIFDRSARWLLALRPLPGIVWLLVLVLPWFVAIYARVGGAFLANS
                     VGHDLLDKVAGSQESHGAPPGFYFVLFFATFFPASILAGLAAPAVWAVRREPAARFLL
                     AWLLPSWIVFELIPTKLPHYVLPLYPAVAILIAGAVETKVLSQRSWQVRGVMWWFLAP
                     IIAGIAAIIAAIVIDRSLVLAAWPLFGIAVACGLLAWQLYADDGAERALTRAAAGWVL
                     VAIAIYGLVVPALGPLFPSVALERVLRRSGCAHPLAASAGYDEPSLVFLAGTATRLTD
                     PSGAADFLREGGCRFAFVAARQERAFALRAEAIGLRYDRGPRVDAFNVTHGQPITIAV
                     FRSVQDVP"
     gene            complement(12353..14533)
                     /gene="pbpC"
                     /locus_tag="VNY79_10775"
     CDS             complement(12353..14533)
                     /gene="pbpC"
                     /locus_tag="VNY79_10775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1C"
                     /protein_id="HWX72976.1"
                     /translation="MASLLAMTRLHVAFLVAALFSTASLAGMAWWIAALGPAPDGKTI
                     EFSNRVFDRDGRLLRAYATPEGRWRLPARIADVDPRLFEVLFAYEDKRFRSHPGVDPL
                     ALMRAAFQLAASGRILSGGSTLTMQVARLLEPRAGRSFLTKLRQIVRAVEVERMLTKT
                     EVLSLYLDLAPYGGNIEGVRAASLAYFGKEPRRLSLGEAALLVALPQAPESRRPDRWA
                     EAARTARNRVLDRFAALGTVQADEIALARAEPVPTGRHAMPMLAPHAANRAVAQAAPG
                     SEIRLTIDADLQRNLEELARERSRTLVQTHGPDASLAILVVDNATGAVAAHVGSPDYF
                     DARRAGEIDMTQALRSPGSTLKPFIYGLGFEDGFIHPETLIDDQPVRYGAYAPQNFDF
                     TFQGTVTVRKALQLSLNVPALAVLDRVGASRLAARLTQAGASLVLPEGEAPGLAIGLG
                     GVGIRLADLVMLYGGIARLGTALPVSEEMDRRSQTTAPEKGEGKRLMEPVAAWYVAST
                     LIGTPPPENGAPGRIAFKTGTSYGYRDAWSIGFDGRRTIGVWVGRPNGAPVPGLVGRS
                     AAAPILFDAFARVGAPPVPLPRAPEGALVTTTARLPPPLKRFSPGGPLGDDAQARLHI
                     LFPPDGARLELSRSEGKPDPVPLKITGAVAPVTVLVNGAPVPPQPRGPLFFSLDGAGF
                     ARVTVIDGSGAADSVVVRAEESASAAASQPAARAACAATPCGRL"
     gene            complement(14647..>18503)
                     /locus_tag="VNY79_10780"
     CDS             complement(14647..>18503)
                     /locus_tag="VNY79_10780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004866 - endopeptidase inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0010951 - negative regulation of
                     endopeptidase activity [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-2-macroglobulin"
                     /protein_id="HWX72977.1"
                     /translation="TDGNGHAQFEAALASGEGGAAPALLTAADAQGDYAFLSLTGSAF
                     DLSDRGVSGRAASAGLDAFVYAERGVYRTGETVYLTALLRDVQGAAALGVPLTLVAER
                     PDGVEYRRTVVPDQGLGGHSVVLPIIGSAPTGTWHVRAFTDPKRPAVGETTFLVEDYV
                     PDRIEFDLTSPTGRVSPKAPATVDVAGRFLYGAPAAGLDLEGDVTVAVAKERAGFPGY
                     EFGLADEEVSAARQPLEDLPATDGAGKAKFNVSLDKLPASTHPLEAKIAVRMAEAGGR
                     AVERTITLPVSPSGAMIGVKPQFSGRSLSDGATAAFDVIVVMPDGTAAARRGLHYELQ
                     RVDTHYQFYKRDGRWNYEPVKTTTRVADGTADAAADKPARISLPVTFGRYRLEVSTGE
                     PDGPVTSLAFDAGFYVEANADTPDMLEVALDQNEYRAGDTMTVAVTARSAGRLTLNVI
                     GDRLLASNSVEVKPGAVQVKMPVGRDWGSGAYVVATLRRPLDAPAQRMPGRSIGVRWF
                     SIDHAAKTLTLDLKAPPLLRPNSTLRVPIKVGLPAGAEARVAVAAVDVGILNLTNYKP
                     PSPDDYYLGQRTLSADIRDLYGDLIDGMQGARGQIRSGGDAGAEALQGNPPTGPPVAL
                     YSGLLKVGADGTAEASFEVPAFAGTVRVMAVAWSKDKIGNASADVVVRDPVVLSATLP
                     RFLLPGDRSSLHFDLDNVEGAPGDYTIAVNGTGALSASATEKLALRAKQRMAVTIPIT
                     ASAAGAGTVEVKVTGPSAFALDRSFALTVRTPAQILARRTVKPIAKGESVTLSSDLFA
                     DLVPGTGSVSVSVGSLTALDAASLLAALDRYPFRCSEQTTSRALPLLYLSDLAKETHV
                     ALQPDADQRIRDAIDMLLTRQDSTGAFGLWGVGGGDDVWLDSYVTDFLTRARERKFAV
                     PETAFRLALDRLLNVVGATTDPSKNDGSDLAYALYVLARNGAAPIGDLRYLADAKLDA
                     LKTPIAKAQVAAALALAGDRTRAERVFAAALTALGPQPLPDLASRLDFGSGLRDAAAL
                     VTLAAEGGASRATVQAAEQRVEAARATLRPTSTQEDAWLLLAASAMAKDAGNVSLNVG
                     GEAMQRPLFRTIRAGDLKEPLRIANAGEDEVKAVVTVTGAPLTPEPAAEKGFKIERLT
                     YTLDGDPVDAKTVKQNTRLAVVLRITEAQPQFGRLVVADYLPAGFEIDNPRLVSSGDT
                     GTLSWITNAVEPVDSQFRDDRFTAAFLRKRDDPAVFTVAYVVRAVAPGKYVRPQASVE
                     DMYWPDRFGRTATESVEVTAVK"
BASE COUNT         3300 a         6247 c         6288 g         2668 t
ORIGIN      
        1 gcgacgatct ccggcggcgt cttcgccggc gcgacgatgc cgacccagcc ggtcccctcg
       61 tagccctgaa caaattcgcc gatcgacggc acgtccggca gagcatgcac gcgctcggcg
      121 ttcgtgaccc ccagcggcac aagctttccg tccttgatgt aagcgaccac agaggcgacc
      181 ggggcgacca tcacgtcgac gcgcccgctc atcagatccg gcaacccggg tccgatgctg
      241 cggtagtgca ccgtgaaaag atcgacgccc gccatcacct tgaacagctc gctgaaaagc
      301 gccgacgcgc tcgccggccc ggacgtgccc atgttgacct tgcccggatt ggctttggca
      361 taggcaatga gctccggcac ggttttgggc gcaaacgccg ggtgggcgac caggacgaac
      421 gcatcgcgcg cgatgctcgc gaccggcgcg aggtcgtgga tgaaattgaa atcgagccgg
      481 tcgtagagcg cggcgttgaa ggcgttgctg gtcgaggcga ggagcaaggt gtagccgtcc
      541 ggcgccgcgc ggacgaccat gccggtcgcg atgttgctgc tggcgccggg gcggttctcg
      601 accacgaact gctggcccag ccgctcggag agccacccgc ccatcacgcg cgccgcgata
      661 tccgtcacgc cgccgggcgc atagccgacg agcagccgca ccggccgcgc gggataggtt
      721 tccgcccggg tgatgcgcgc ggcgagcggc aacgcggccg cgcccgcggc cagattcaaa
      781 aatgtgcggc gcagcaacat accgctcctt ctcccttggc cgtcactctc cgcttggcgg
      841 cggtcctccg aatcctataa tcgcatgaag ccgcagccgc ggtcatcgac cgcaggcagc
      901 cgggtggctg cggaggacat catgctgttc cgtcagctgt tcgaccagac gtcgggcacc
      961 tattcctatc tgatggcgag ccgccgcggc ggcgaggcgc tgatcatcga tccggtgctg
     1021 gaaaaggtcg accgctacct tcagctggtg cgcgaactcg acctcaaatt ggtcaaagcg
     1081 gtcgatacgc atatgcacgc cgaccacatc accggcctcg gcgcgctgcg cgacaaaacg
     1141 cgctgcacca ccgtcatggg cgagcagacc aaggccgacg tcgtctcgat ccgtctcacc
     1201 gacggcgaca agctgaccat cgagggactt gcgctcgacg tgctctacac gccgggccac
     1261 accgacgatt cgtactcgtt cctgcttgcc gaccgggtat tcaccggcga tacgctcctg
     1321 atccgcggca ccggccgcac cgatttccag aacggcgacc cgcgcgcgca gtacgattcc
     1381 atcttcaaca agctcatgaa gctgcccgac gagacgctcg tctatcccgc gcacgactac
     1441 aagggcgaga gtgtctcgac catcggcgag gaaaagaatt tcaacccgcg gctcagagtc
     1501 aagtcgatcg acgagtacgt cgacctgatg aacaatctga aacttcccaa tccgaagatg
     1561 atggacgtgg cggtgccggc caacatgcgt gtcggcctgc gccaggagga gattgcgcgc
     1621 aagggctggg cgttgtcggc ggccgaggcg atggcgatgc gcggccgcaa cgacgtggcg
     1681 ctcatcgatc tgcgcgagaa gaacgaacgc gagaagcacg gcgtcatccc cggctcgctg
     1741 catgcgccct acccggattt ggcggagaac atcagcgccg gcggcatgct gcacgaactg
     1801 gccgaggcca ccggcaagcg catcgtgttc tactgcgcct acggcgagcg ttcggcgatg
     1861 gcggtgcagg cggcgcagga tgcggggctc aagaccgctt gccacatcga gggcggcgtc
     1921 aacgcctgga agaaggccaa cggaccgttg gcgcgctgat ttccggtcgg ccgcgagcga
     1981 ctcggccccg cgctccccat cttccccaaa ggcgaaagcc gcaggcgctg gtcctgcggc
     2041 ctccgcttgc gcctgctgtg gggaggacat cagcaagcgc caaacaaacg cagcgaacta
     2101 aagatcggag ctgtcttcgt cccgctcgcc gtccgtcgtc atcccgtgcc ggccgccatc
     2161 cggcccgctg cggcccatca tgcggtgcga tccgccttcg tccccgtcgg gtgacatcat
     2221 cccgtccggc ccctcgccgt ggcgctcgaa attaccgccg cggccgtgat catcgccatc
     2281 tggctcgcct ctccaccacc agccgccagc catgttgtgc ggtcgcacca tacgggcaag
     2341 aatcttgaac cggtgtttct gcgcatcgtc gaggctctga tagagcgggc cgcccgcctc
     2401 ggcgacgtgt ttgagcgcac cgccgaactg cgccatggca tcggcgcggc gctgcagtcg
     2461 atcgaagaaa ttggcaggag gcggctgctc gccagtttcg cgctcctgga tgcgatcgat
     2521 cctgagcttc accagatcgc gcaaggcctg ctcgaacggc ccccagttct tctcctgctc
     2581 gggcgtgagc tgcagtccgg ccttgagcgc cgcgatgcgc gcatcggcga acgcgcggac
     2641 gtcaccgacg ctcggcagcg gatgctgcca agaacacggg ccgccgtcga aatccggttc
     2701 gccggagcgc tgctgcgcat acacaaacga agagccggct atcgccagca ccgccgcggc
     2761 aaccacaggc ttaagcatgt cgtcctccgc atctctttca gggtgacgaa gtagaaagct
     2821 gcgctgaccg gcagacaagt taaacttttg tcagattggc gatggcgcat tacaacgcgg
     2881 taatcttcgc gcggcgacta ttgctgctcg gcgctcgcgt tgacggcgcg ccacgcgctc
     2941 aatgcaggat ttgctgaagg aacagccgcg tgcgctcgtg ctgcgggtga tcgaagaagc
     3001 tctgcggcgc gttgatctcg acgatctgcc cttcatccat gaagatcatg cggtcggcga
     3061 cctgccgcgc aaaacccatt tcgtgggaga ccacgagcat ggtgatgccg tcggtcgcca
     3121 gttcgaccat ggtgtcgagc acctccttca ccatctccgg gtcgagcgcc gaggtcggct
     3181 cgtcgaacaa catgatgttc ggattcatgc acagcgcacg ggcgatagcc acgcgctgct
     3241 gctggccgcc ggacagccgc gccggatatt tgctcgcctg gccgggtatc ttcacgcgtt
     3301 cgagatattt catggccagc gcctcggcct cgcgccgcgg catgtgccgc acccagagcg
     3361 gcgccagcgt gcagttctcg agcacggtca ggtgcgggaa cagattgaac tgctgaaaca
     3421 ccatgccgac gtcgcggcgc accgcgagaa tgcgcttggg atcctcggtg agttcgatgc
     3481 cgtcaacgat gatgcgcccg cgctgccagt cctccaggcg attgatgcag cgcagcagcg
     3541 tggacttgcc gccgccggag ggcccgcaga tgacaatgcg ctccccgcgc gcgaccttca
     3601 ggttgatgtc gcgcagcacg tggaattcgc cataccactt gtgcaggccg agaacttcga
     3661 ccgccacctc ggccggcggc gccggcgcgc ccacatcgtc ccgaccctgt gccatcgcca
     3721 gccttcaccg tcgcccggcg cgcgccaggc gcgcctccac gcttcgcgcg tagcgcgaca
     3781 tgccatagca gcagacgaag tagaagagcg cggcgaaggc atagccggtg atgggcgtgg
     3841 tcggggcccc ccaatgcggg tcggcgcgcg ccgcctcgat cgtgcgcagg aaatcgaaga
     3901 tgccgacgac gaagacgagc gtcgtatcct tgaacaggcc gatgaaggtg ttgacgatgt
     3961 tgggcaaggt cacgcgcagc gcctgcggca agatcacgag cccggtcatg cgccagtagg
     4021 tgaagccaag cgcgcgcgcc gcttcgtatt ggccgcgcgg caccgcggcg agcccgccgc
     4081 gcaccacctc cgccatgtac gccgaggcga acatcgctac gccgaccagc gcacgcacca
     4141 gcttgtccgg cgccagacgg tcggggacga acagcggcag catcacgctc gccatgaaca
     4201 gcacggtgat cagcggcacg ccgcggacaa actcgatgaa gatcaccgac agcagcctga
     4261 ccaccggcag gtcggatcgg cgccccagcg ccaggaggat gccgagggga agcgagaaca
     4321 cgatgccgac cgtcgccacg atcacggtga cgagcatgcc gccccacagc gccgtcggca
     4381 ccaccgcgag cccgatcggc ggcgcgccgt gcagcagcac gaaggagaga accggcagca
     4441 cgacgaagaa atacaacgct ccgagatcgc gccgcggcgc cgaaagccgc agcagccaga
     4501 cgatgccgaa tgcgagcgcg atgaaaaaca gatcgacccg ccagcgctgg ccggccgggt
     4561 agaagccgta gacgaaatag gagaaccaca cccgtacaaa cgcccagcag gcgccgacgg
     4621 cggggtgctc gggcgtggcg aggcacgcct cgcggtcggc tccggaccag accgcatcga
     4681 tgagaaaaaa ccggaccagg ggcgggatgg cccaggcgat aaacagcacg cagagaagcg
     4741 tgagcgcgat gttcgccggc gacgagaaga ggttggcgcg aagccagcct aaggcgccgg
     4801 tggcggcgag cggcggcggc agcctttccg ccgggaggcg gcgcacatag gcgaacggtt
     4861 cgtcgctcac cgccgccatc gccgtcaatg ctccaccacc gaggtggtac gggcgtacag
     4921 gttcatgagc gccgacgcga acaggctgat ggcgagatac acagccatgg tgatcgcgac
     4981 gacctcgacc gcctggccgg tgatgttgag caccgtgccg gcaaagacct gcacgaggtc
     5041 ggggtagccg atggcgacgg cgagcgagga gtttttgatc agattgagat actggctggt
     5101 cagcggcgga atgatgacgc gcatcgcctg cggcacgatg acgagccgca gcgtcgcgcc
     5161 ggagcgcagg ccgagagcct gcgccgcctc ggtctgaccg gcggacacgg acagcacgcc
     5221 ggcgcgcacg acttcggcga taaaggccgc ggtataggtg gtgagcgcca gcgtgagcgc
     5281 cgcgaattca ggcaggattt caatgccgcc gcgcacgttg aagcgcccca tgtgcagcgg
     5341 gctgaaggtg agcggagcgc cggtcacggc ggcggcgatg atcggcagtg cgcacagcag
     5401 cgccaatgcc ggccagaaca tgtggatttc cgcgccggtg cgttcctggc ggcggcgcgc
     5461 ccataggcgc aggacgatga cggcgaatac gccggcgagg aacgcggcga gcacggcgga
     5521 aaagccggaa gcgaattctg gccggggcag gaacagaccg cgattgttga gaaaaccgcc
     5581 tcccggcagc gcgacgctgc cctggacttc cggcagcgat ttcaacaccg cgttgtacca
     5641 gaacaatagc tgcagcagca gcggcacgtt gcggatcacc tcgacataac cggccgcaag
     5701 ccgcgccacg agccagttgc gcgacaagcg cgcaatcccg acggcaaagc cgagcacggt
     5761 cgcgagcacg atgccgatcg cggccaccag cagcgtattg aggaggccga cccagaacgc
     5821 acgtccgaag gtcgaggcgg ccgcagaata gggaatcagc gtctggctga tgtcgaagcc
     5881 ggcggtgttg ttccagaagc cgaagccgga ggcgatgtga gcgcgcgcga gattgtgcgc
     5941 cgcgttgtac gcggccgcgt agacgaggcc gccgatcaga acgatgaggc cgacctggac
     6001 cgcgatgctg gcgatgcgac gccgataccg cgccccggtt tgcgcttcat cggccatcga
     6061 caggcccgcg gcaagaacgg acgcacaagg agcaggctca gcggaacggc ggcccgtatt
     6121 gcaggccgcc cttggtccac agcgcgttga gaccgcgcac gatcttcagc ggcgaaccct
     6181 ggccgatgtt gcgttcgaaa acttcgccgt aattgccgac gtgcttgacg atgcgataga
     6241 cccagtcgtt ggtgagcccg agcgcctcgc cgtattgacc ctcggcgccg agcatccgcc
     6301 gggtctccgg atcgtcggat ttcaatttct cgtcgacgtt ggccttggtc acgccgagct
     6361 cctcggcgtc aaccatggcg aaatgcgtcc agcgcacaat gtccgtccac tgactgtcgc
     6421 catggcggac cgccggggtg agcggctcct tggagatgat ttccggcaac acgatgtggt
     6481 cgcccggtac ggcgagcttc tgccgttcgc cgtagaggcc cgacgaatcg gtggtgtagg
     6541 catcgcagcg tccggactcg taggccttgc gcgcctcgtc gccggtggcg aaggtcacgg
     6601 tcttgagctg catctggttg gcgcgaaagt agtcggcgag gttgagctcg gaggtggtgc
     6661 cctgctgcac gcagacggcg gctccgttga gctccagcgc cgagttcacc ttcagcgccc
     6721 tgcgcaccat gaagccctgg ccgtcgtaat aggtgacggc gacgaaatcg agcccgagcg
     6781 aggtatcgcg cgagagcgtc caggtggtat tgcgcgacaa cacatcgatc tcgcccgact
     6841 gcagggcggt aaagcggtcc ttggcggtca gcggcacgaa cttgaccttg gtcgggtcat
     6901 tgaagatcgc cgccgctatg gcccggcaga agtcgacgtc gaagcccgtc caattgccct
     6961 gcgggtcggg caggccgaag ccggcaagcg ttccattggc gccgcaaatg agctcgccgc
     7021 ggttcttgat cgtggtcagc gtctgcgcgg atgccgcctg catgccgaat gcaagcacgg
     7081 tagcaaacgc aagtgccgtc gcgaggcgtt tcatgattca agcctttcag gataggcggc
     7141 cgcgcgccaa agcccggtct agggcgcgct cattgcagtt ccctgcccgc ctgccatctg
     7201 agaacgatcg cgctgcaagg tcaaggggtt gacgcagcgc ggcgatgccg aagtaatggc
     7261 ccacatctag tggctgtaat ggcgcacttg taatgacgcc ctcggtggcg cgtcacgcct
     7321 gtcgcgacgc ttgcgagaga caggagcatg aacgacagca acaacgacga ccgcccgccg
     7381 cggcgcccag gtacccgcgt ggtcaccggc ggccgcgacc cggcgtcctt tcacggcttc
     7441 gtcaatccgc cggtctatca cgcctcgacc gttctctacc gctccgcggc ggactatgtc
     7501 gcccaccgtt cgcgctatca atacgggcgc cgcgggacgc cgacgaccga ggcgctcgaa
     7561 ctcgcactgc aggagctcga aggcccgcaa tgcgccggcg tggcgctgtt gccgtccggg
     7621 cttgcggcga tctcggctgc gttgctgtcg gtcgtgcatg ccggcgacca cgtcctcgtc
     7681 accgacagcg tctatgggcc gacgcgcacg ttttgcgacc aaatcctcac ccggctcggc
     7741 gtcaccacca cctactacga tccgctcgcc ggggccgctg tcgccgcgtt gatgcaggag
     7801 aacacgcgcg ccgtctatct ggaatcgccg ggctcgctga gcttcgaaat gcaggacgtc
     7861 gccgccatcg ccggcgcggc tcacgcgcgg ggcgcgctcg tgctcatgga caacacctgg
     7921 gcgagcccga tctacttccg tccgttcgac cacggcgtcg atctcgccat ccaggccggc
     7981 accaaatata tcggcggcca ttccgacgta atgctgggca cggtttcggc caacggcagg
     8041 acggtcaagg acctcaaaaa catggtgggg ctgaacgggt ggtgcgtcgg ccccgacgac
     8101 gtctatctcg gcatgcgcgg cttgcgcacg ctcgccgtgc gcctcgaccg ccactatgag
     8161 tccggactcg ccgttgcgcg ctggctggag cagcgccccg aggtcatgcg cctgctgcat
     8221 ccggccatgg ccagtcatcc cggccacgcg ctgtggaagc gcgattttac gggggcatct
     8281 ggattgttca gcgtcgtgct caagccggtg cggcagaagg cggtctacgc ctttctcgat
     8341 acgctcgaac tgttcggcat cggcccctcc tggggcggct atgagagcct ggcgacgcct
     8401 ttcaactgcg cgccggcgcg taccgcaacg cggtgggagc cgggcggccc gacggtgcgc
     8461 ttccacatcg gtctcgaagc gctcgaggac ctcatcgccg acctcgaacg cggctttgcc
     8521 gcgcttgctg ccaacgccga cgaatagacg cgcagtgccg ctgcaaacct tgtcgcgatc
     8581 ccgctacgca ggcgtcgccg ccgccttgcg gtcgcgcatg acgaaatgca ggttgcgcag
     8641 gtagacgaac accccaaacg cctggccggc gatgaacacc ggatccttgc ggtagagcgc
     8701 atagacgagc aacagcagcc cgccggcgat cgaaaaaatc cagaacccca gcgggatgac
     8761 gctgtggccg gcgcgttcgg tggcaatcca ctgcaccaga aagcgcatcg tgaacatgcc
     8821 ttgggcgatg aagccgagca gcacccacca atcgagccgg gtgataaaga catcctgcag
     8881 gtaggcgccg acttcgcgcg acagatcaac gagcaagggt gacctcctca cattcgggaa
     8941 cacgcctgcg gcgccggatc agccaccaga ccccggcaag atcgagaatg ccgacccaca
     9001 gacgatccca caaaccgtag ttcgacgtac cgtgccgcct gggccggtca acgacgtcga
     9061 catagccgac gtcatatcct tcgcgccgga ccagggccgg cagaaagcgg tgcagcccgt
     9121 cgaaataagg cagcgccagg aacaaatcac ggcgaaacgc ctttaggccg cagccggtgt
     9181 cgcgcgtgcc gtccttgagc accgcgtcac gcacggcgtt ggcggtgcgt gattgccatc
     9241 gcttgaagcc ggttgccttg cggccgacgc gctggccggc gacgagaccg atttgcggcg
     9301 cgccttgctc cagcgcggcg agaagggcag gaatgaaggc cgggtcgttc tggccgtcac
     9361 cgtcgagggt gacgacgacg gccgcgcgcg ccgcgataac cccgctgcgc acggcggccg
     9421 attggccgca ggactgcgca tggcgaagct gccgcagcca gggacgcagc gtcatcaagc
     9481 cccgcaattc ctgttccgtc ccgtcccggg aaccgtcgtt gacatagagg atctcgaaga
     9541 cgcggcccgc gagcgcggcg gcgatctcgg cgacgagcgg cgcgacattg ccggcctcgt
     9601 tccgcaccgg cacgacaacc gaaacggcag gaccagagtc gttcctctgc agcatgtcgc
     9661 aagcttctag agtgtgacca aggccggttc aatcggccgt cggcggtgcc ggcgcgcttg
     9721 cgccgcggcg gcgggcggcg gccttgaagc gccgccacga gggccacgga tacggccgca
     9781 gatcgcgcgg cgaaaacgca agccgccgcg cggcaaagac gcggcgcaac agcagcacac
     9841 cgaccgcacc gaccagcgcg ccggcgagca cgtcgctcgg gtgatgggcc acgacgacga
     9901 cgcggctgaa catgatcgtc agcgcgtaga gccacatgag cgggcgcgcg cgcggccaga
     9961 cggcgccgat cgccaccgcg gccgccgccg cgcttgtcgc gtgccccgag ggcatgctgg
    10021 cgtaggccgg ctgccagatg aacggcttgt acaagaacgg attgtcatag ccgccgacat
    10081 aggggcgcgc gcggccgatc aggcgtttga caatggtcgt gaacaggccg ggggcggcaa
    10141 tcgccacgaa gagaaagccg aagcgggcgc cgagtgccgc gaacacccct tgcgcaaggc
    10201 ggggcgaggc gggcgacgcg accgccgcga gaccgagaag gatgacgccg agcggataga
    10261 gaaaccagcc cgaaaggccg aaatcggtga tccgttcgaa cgcctcgatg aaccagcccg
    10321 gcaaatgccg cgcccagtcg ctcgcggtgc ggtcgagcac aaacatcgac gcgatgatcg
    10381 ccatacaggt gaggagaaga accgcggcga ccgcgcgccg cggcggcgcc ggcagctttg
    10441 cccgcggtgg gcgcgcaagc gcgacgaccg caagggcaaa attcgccacg atgcgcgatg
    10501 gaagcgctgc tgcgccctgc ttcgtccctt ccgactttac ctgggcagaa ttcacccgcg
    10561 tcacggcaca tcctggaccg accggaagac ggcgatggtg atcggctggc catgggtgac
    10621 attgaaggca tcgactcgcg gcccgcggtc ataacgcagc ccgatcgctt ccgcgcgcag
    10681 cgcgaaagcg cgctcctggc gcgcggcgac gaaagcgaag cggcagccgc cttcgcgcag
    10741 gaagtcggcg gcgccggaag gatcggtcaa gcgcgtcgcc gtgccggcga gaaagaccag
    10801 gctaggctcg tcgtagccgg cgctggcggc gagcggatgc gcacagcccg atcggcgcag
    10861 cacccgctcg agtgccacgc tcgggaagag cgggccgagc gccggcacga ccaagccata
    10921 gatggcgatg gcgaccagca cccaaccggc cgcggcgcgc gtgagggcgc gctccgcgcc
    10981 gtcgtccgcg tacaactgcc aggccagcag cccgcaggcg acagcgatcc cgaacagcgg
    11041 ccaggccgca aggacgagac tgcggtcgat cacgattgcg gcgatgatag cagcgatacc
    11101 cgcgatgatc ggcgccagga accaccacat cactccgcgc acctgccacg accgctgcga
    11161 cagcaccttg gtctcgaccg ccccggcgat aagaatggcg acggcggggt agagcggcag
    11221 cacgtaatgc ggcaacttgg tcgggatcaa ttcgaacacg atccaagacg gcagcagcca
    11281 agccaggagg aagcgggcgg cgggttcgcg gcgcaccgcc cataccgccg gcgccgccaa
    11341 tccggcgagg atcgaggccg gaaagaaggt cgcgaagaac agcacgaagt agaagcccgg
    11401 cggcgcaccg tgactttcct gcgagccggc aaccttatcg aggaggtcgt ggcctacgga
    11461 gttagcgagg aacgcgccgc cgacacgggc atagatcgcg acgaaccagg gcaacacgag
    11521 aacaaggagc cagacaattc cgggaagcgg acgcaacgcc aaaagccagc gcgcggaacg
    11581 atcgaagatc gagagcgccg ccgcggcaag gccgacgatc atgacgatca gtggcccctt
    11641 gagtagaatt cccaccgcca gcgccgtcca gaacaccgca acaagtgccc actcccgcgg
    11701 tggcggccgc gcaccgccag gaaacaggta gacgcgcgcc atggccccca tggcggcgac
    11761 gacagcgagg agcagcatcg cgtcggtctt ggcgagccgc gcttccacgc ccagcatggt
    11821 cgagcccagc atcatcagcg ccgcgagcgc cgccccccgg cggccgacaa aggcaagcgc
    11881 gcaccagtag gtcgccagca ccgcgcccac tgcgccggcg agcgacggca tgcggtaaag
    11941 ccagatgcgc gtgcgggcgc ggggaacgcc gacggcttcc gcggtcttca ccaccgccgc
    12001 ctgcagccag tagatgccga ccggtttctt gtaacgcacc tcatcctgga aacggatgtc
    12061 gacgtagtcg cccgtctcga tcatctgttt ggtggcttgc gcgaagcgcg cctcgtcgcg
    12121 gtcgacgggc gggatctgga agattccggg cacgaaggcg atcagggaaa cgatcgcgag
    12181 cacggcgagc gcccgccggt ttgaactcgc cgcaaagtcg aagaccgccg caaggctgtt
    12241 cgccggccac aatgtccacg acgccgcgct gccgcccgtg ctcatgtcat ttccggtgcc
    12301 gacaaatgcg cgccgaccat agtgaaaccg cgcccggcgg ggaaggaccg gctcagaggc
    12361 ggccgcaagg cgtcgccgca caggcggcgc gcgccgccgg ctgcgacgcc gcagccgaag
    12421 cgctttcctc ggcgcgcacg actacgctgt ccgcggcgcc ggagccatcg atgaccgtga
    12481 cgcgggcgaa gcctgcaccg tcgagcgaaa aaaagagcgg cccgcgcggt tgcggcggaa
    12541 ctggcgcgcc gttgaccaga acggtgaccg gggcgacggc gccggtgatt ttgaggggaa
    12601 ccggatcggg cttgccttca ctccgcgaaa gctcgaggcg ggcgccgtcc ggcgggaaca
    12661 ggatatgcag cctcgcctgc gcgtcatcgc ccagcgggcc gccgggcgaa aagcgcttga
    12721 ggggtggcgg cagcctggcg gtggtggtca cgagcgcccc ttccggggcg cgcggcagcg
    12781 gaaccggcgg agcacccacg cgggcgaagg cgtcgaagag gatcggcgcc gccgcgctgc
    12841 gtccgacgag gccgggcacc ggcgcgccgt tgggccgtcc cacccacacg ccgatggtgc
    12901 gcctgccgtc gaagccgatc gaccaggcat cccggtagcc gtagctggtg ccggtcttga
    12961 acgcgatgcg gccaggcgcg ccgttctccg gcggcggcgt gccgatcagc gtgctcgcca
    13021 cgtaccaggc ggcaacaggt tccatcaatc tcttcccctc ccccttctcg ggagcggttg
    13081 tctgcgagcg acgatccatt tcctcgctga ccggcagcgc cgtgccgagc cgcgcgatac
    13141 ctccgtagag catcaccaga tcggcgagcc tgatgccgac gccgccaaga ccgatcgcta
    13201 gacccggcgc ctctccctcg gggagcacga gcgaggcgcc ggcttgcgtg agccgcgcgg
    13261 caaggcggct tgcgcctacc cgatcgagca cggccagcgc cggcacgttg agcgaaagtt
    13321 gcagcgcctt gcggacggtg accgtcccct ggaaggtgaa atcgaaattc tgcggagcat
    13381 aggcgccgta gcggaccggc tggtcgtcga tcagcgtctc cgggtggatg aagccgtcct
    13441 caaagccgag gccgtagatg aacggcttga gcgtcgagcc tggcgagcgc aacgcctgcg
    13501 tcatatcgat ctcgccggcg cggcgcgcgt cgaaatagtc gggcgagccg acgtgcgccg
    13561 ccaccgcgcc ggtcgcattg tcgacaacca ggatagcgag cgaggcgtcg ggaccgtgcg
    13621 tctgcaccag cgtccggctg cgctcgcgcg ccagctcctc gagatttctt tgcaagtcgg
    13681 cgtcgatagt aagccggatt tcgcttccgg gcgcagcttg cgcgaccgcg cgattggccg
    13741 catgcggcgc cagcatgggc atggcgtgcc gcccggtcgg caccggttcg gccctggcga
    13801 gcgcgatctc gtccgcctgc acggtaccga gcgccgcaaa gcggtcgagc acgcggttgc
    13861 gcgcggtgcg cgccgcctcg gcccagcgat ccggccgcct cgactccggg gcctgcggca
    13921 gagcgacgag cagcgccgcc tcgccgagcg aaagccgccg cggctccttc ccgaaatagg
    13981 cgagcgaggc ggcgcgcacg ccctcgatat tgccgccgta gggcgccaga tcgagataga
    14041 gcgaaagcac ctccgtcttg gtcagcatgc gctcgacctc gaccgcccgc acgatctggc
    14101 ggagtttcgt caggaagctg cggccggcgc gcggctccag cagccgcgcc acctgcatgg
    14161 tcagtgtcga gccgcccgag agaatgcgcc cgcttgctgc aagctggaac gccgcgcgca
    14221 tgagcgccag cggatcgacg cccggatggg agcggaaccg cttgtcctcg taggcgaaca
    14281 gcacctcgaa aaggcgcgga tcgacatcgg caatccgtgc cggcaaccgc caacggccct
    14341 cgggagtggc ataggcccgc aacagccgcc cgtcgcggtc gaacacgcgg tttgaaaatt
    14401 cgatcgtctt cccgtccggc gccggaccga gcgcggcgat ccaccaggcc atcccggcca
    14461 gcgatgccgt actaaagagt gccgctacga ggaaagcgac atgcaacctg gtcatggcga
    14521 ggagggaagc cacgaagcaa tccaggcacc gcgcgagcgc cctgcgcggc tggattgcct
    14581 cgcggagcct gtcatcgggc cggccacttc gggccggagc cgttggctcg ccgtaaccaa
    14641 gcggattcat ttcaccgccg tgacctcgac gctctcggtc gcggtgcggc cgaaacgatc
    14701 cggccagtac atgtcttcga cgcttgcctg cgggcgcacg tatttgccgg gcgcgaccgc
    14761 acgcaccacg taggcgacgg tgaagaccgc cggatcgtcg cgcttgcgca ggaacgccgc
    14821 cgtgaagcgg tcgtcgcgga actggctgtc aaccggctcc accgcattgg tgatccacga
    14881 cagcgttcca gtatcgcccg aggacacgag ccgcggattg tcgatctcga accctgccgg
    14941 cagatagtcg gcgacgacca ggcggccgaa ttgcggctgt gcctccgtga tccggagcac
    15001 caccgcaagc cgcgtgttct gtttgaccgt cttcgcatcg accggatcgc cgtcgagagt
    15061 gtaggtgagc cgctcgatct tgaagccctt ctcggccgcg ggctccggcg tcagcggcgc
    15121 gccggtgacc gtgacgacgg ccttcacttc atcttctccg gcgttggcga tgcgcagcgg
    15181 ctccttgagg tcgcccgcgc ggatggtgcg aaagagcggg cgttgcattg cctcaccgcc
    15241 gacattgagc gacacgttcc cggcgtcctt ggccatcgcg ctcgccgcca gcagcagcca
    15301 agcgtcctcc tgcgtggagg tcgggcgcaa agtggcgcgt gcggcctcga cccgctgctc
    15361 ggcggcctgc accgtggcgc gggacgcgcc gccctcggcg gcgagcgtga ccagcgcggc
    15421 ggcatcgcgc aaacccgaac cgaagtcgag gcggctggcg agatcaggca gcggctgcgg
    15481 cccgagcgcg gtgagcgcgg cggcgaatac ccgctcggcc cgcgtgcggt cgccggcgag
    15541 cgcaagcgca gcggcgacct gagccttggc gatcggagtc ttcaatgcgt cgagcttggc
    15601 gtcggcgaga tagcgcagat cgccgatcgg cgccgcgccg ttgcgcgcca acacgtagag
    15661 cgcgtaagca agatcgctgc catcgttctt gctcggatcc gtcgtcgcgc cgacgacgtt
    15721 gagcaagcga tcgagcgcaa gacggaacgc cgtttcgggc acggcgaact tgcgctcgcg
    15781 cgcgcgggtg agaaaatcgg tgacgtagga atcgagccag acgtcgtcac cgccgccgac
    15841 accccagagc ccgaaggcgc cggtggaatc ctgccgcgtg agtagcatgt cgatggcgtc
    15901 gcggatgcgc tgatcggcgt ccggttgcag cgcgacgtgg gtttccttgg cgagatcgct
    15961 gagatagagg agcggcaagg cgcggctcgt cgtctgctcc gagcagcgga acggataacg
    16021 gtcgagcgca gcgagaaggc ttgccgcatc gagcgcggtc aaggacccga ccgagaccga
    16081 gacactgccg gtgccgggaa cgagatcggc gaacagatcg ctcgacagag tcacgctttc
    16141 gcccttggcg atcggcttca ccgtacgccg cgccagaatc tgtgcgggcg tgcgcaccgt
    16201 gagcgcgaag ctccggtcga gggcaaatgc cgacggcccg gtgaccttca cctcgacggt
    16261 gccggcgcct gccgcgctgg ccgtgatcgg gatggtgacc gccatgcgct gcttggcgcg
    16321 caacgccagc ttctcggtgg ccgacgcgga aagcgcgccg gtgccgttca cggcgatcgt
    16381 gtaatcgccg ggcgcgcctt cgacattgtc gagatcgaaa tgaaggctgg agcggtcgcc
    16441 gggcaggagg aagcgcggca gcgtcgcgct cagcaccacc ggatcgcgca ccacgacgtc
    16501 ggccgaggca ttgccgatct tgtccttgct ccacgccacc gccatcacgc gcaccgtgcc
    16561 ggcgaaggcg ggcacctcaa agctcgcctc cgcggtgccg tcggcgccga ccttcaggag
    16621 gccggagtag agcgccaccg gcggtccggt cggcggattg ccttgcagcg cctccgcgcc
    16681 ggcgtcgccg ccgctgcgaa tctggccgcg ggcgccctgc atgccgtcga tcaggtcgcc
    16741 gtaaaggtcg cggatgtcgg cggaaagggt gcgctggccg aggtagtagt cgtccggcga
    16801 cggcggcttg tagttggtga ggttgagaat gccgacatcg acggccgcga ccgccactcg
    16861 cgcctccgcc cctgccggaa ggcccacttt tatcggcacg cgcagggtcg agttcggccg
    16921 cagcagcggc ggcgccttga gatcgagggt gagcgtcttt gccgcgtggt cgatcgagaa
    16981 ccaacgcacc ccgatggagc ggccgggcat gcgctgtgcc ggcgcgtcga gcggccggcg
    17041 cagcgtcgcc accacatagg cgccgctgcc ccagtcgcgg ccgactggca tcttcacctg
    17101 cacggcgccc ggcttgacct cgacgctgtt gctcgccagc agccggtcgc cgatgacgtt
    17161 gagcgtgagc cgtccggcgc tgcgcgcggt gaccgcgacc gtcatcgtgt cgccggcgcg
    17221 gtactcgttc tgatcgaggg ccacctccag catgtccggc gtatcggcgt tcgcctcgac
    17281 atagaagcct gcatcgaaag cgagcgaggt caccgggccg tcgggctcgc cggtcgatac
    17341 ttcaaggcga tagcggccga acgtcaccgg cagcgagatg cgcgccggct tgtcggcggc
    17401 ggcatcggcc gttccgtcgg cgactcgcgt cgtcgtcttc accggctcgt agttccagcg
    17461 gccgtcgcgc ttgtagaact gatagtgggt gtcgacgcgc tgcagctcgt agtgcaggcc
    17521 gcgccgcgcg gccgcggtgc catcgggcat gaccacaatg acatcgaacg cggcggtggc
    17581 gccgtcgctg agcgagcgcc cggaaaactg cggcttgaca ccgatcatcg cgccgctcgg
    17641 gctcaccggc agggtgatgg tgcgctcgac cgcgcggccg ccggcctcgg ccatgcgcac
    17701 cgcgatcttc gcttcgagcg gatgcgtact tgccggcagc ttgtcgagac tgacgttgaa
    17761 tttcgccttg ccggcgccgt cggtcgccgg caagtcctcg agcggttgcc tggcggccga
    17821 aacctcctcg tcggcaaggc cgaactcgta gccggggaaa ccggcgcgct ccttggccac
    17881 cgcgacggtc acgtcgcctt cgaggtcgag gcctgctgcc ggcgcgccgt aaaggaagcg
    17941 gcccgcgacg tccaccgtgg cgggcgcctt cggcgagacg cggccggttg gcgaggtgag
    18001 atcgaactcg atccggtcgg gcacgtagtc ctcgacgaga aacgtggtct cgccgaccgc
    18061 cggccgcttc gggtctgtga aggcgcgcac gtgccaagtc ccggtcggcg cggaacctat
    18121 gatcggcaaa accacgctgt gaccgcctag gccctggtcc ggcaccaccg tgcgccgata
    18181 ttcgacgccg tcgggccgct cggcgacgag cgtcagcggc acgccgagcg cggcggcgcc
    18241 ctgcacgtcc cgcaggagtg cggtgagata gacggtctcc ccggtgcgat agacgccccg
    18301 ttcggcatag acgaaggcgt cgaggccggc cgaggcggcg cggccgctga cgccgcgatc
    18361 gctgagatcg aaggccgacc cggtgaggct gaggaaggca tagtcgccct gcgcatcggc
    18421 ggcggtcagc agcgcggggg cggcgccgcc ctccccgctc gcgagcgccg cttcgaattg
    18481 cgcgtgcccg ttgccgtcgg tgc
//
LOCUS       DATMQB010000376         4826 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3885501, whole genome shotgun sequence.
ACCESSION   DATMQB010000376 DATMQB010000000
VERSION     DATMQB010000376.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4826)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4826)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4826
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3885501"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(640..2364)
                     /locus_tag="VNY79_10785"
     CDS             complement(640..2364)
                     /locus_tag="VNY79_10785"
                     /inference="COORDINATES: protein motif:HMM:NF012772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF and EAL domain-containing protein"
                     /protein_id="HWX72978.1"
                     /translation="MPAGAAHSIPSGPNIAAKLDAADILASVGAALYHWDIESDALVW
                     SPNVLDVLCVADVATISTGRRYAQLLDAANVQARFDAVMQTDQRDEGRGGFFQTEYCI
                     RPDSGSGAKLWIEDSGRWFAGAGGRPARVHGTVRVVTERHESDSRLSYLAYHDSLTGE
                     LNRHQLTVILEKTLGEAMRSRSSCGFLLVAIDNLGRINDSYGFDIADEVIAAVAKRIR
                     GRMRGKDSLGRYSGTKFGIVLTECTPDDMATAADRLLAGVRDEMVPTAAGPVAVTVTI
                     GGVTAPRHARSVPEVLARAKEGGARRGEGQAAGLILRLSAQSRARRAAPRQHARHRRD
                     RRRAQRTAHLPCLRNGGGEHLPAFYECLMRVRRTDGTLLGASDVVPVAERLGLVRFLD
                     HRVLELVVSELAAAPALQASVNVSPASTTDPDWWAGLDSLLRTHAGVSERLIVEITES
                     AAIHDVDETRGFVARVKDLGCRIAIDDFGAGYTSFRNLRKLGVDIVKIDGAFVENLIR
                     SEDDRAFVRTLIDLARRLGLATVAEWVQDERTAKTLEAWGCEYLQGAHVGLTSLERPW
                     LASRAQAV"
     gene            complement(2864..3274)
                     /locus_tag="VNY79_10790"
     CDS             complement(2864..3274)
                     /locus_tag="VNY79_10790"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72979.1"
                     /translation="MFVLGFPLLLIPFAVYNIIAFITPGVSWTATVTTVHMMSGQDWV
                     LTWEDIIVGFAILLLAVEIMKATRIGIRTIIDHMLAMALFIVMLVEFLLVERAGTSTF
                     FLLLIISLVDVLVGFTVSVRTSQRQVEIQAEGPA"
     gene            complement(3420..3605)
                     /gene="rpmF"
                     /locus_tag="VNY79_10795"
     CDS             complement(3420..3605)
                     /gene="rpmF"
                     /locus_tag="VNY79_10795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HWX72980.1"
                     /translation="MAVPKRKTSPSRRGMRRSADALKRPTYIEDKDSGELRRPHHIDL
                     KTGMYRGRQVLDKKTEA"
     gene            complement(3719..4444)
                     /gene="mtgA"
                     /locus_tag="VNY79_10800"
     CDS             complement(3719..4444)
                     /gene="mtgA"
                     /locus_tag="VNY79_10800"
                     /EC_number="2.4.1.129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009274 - peptidoglycan-based cell wall
                     [Evidence IEA];
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="monofunctional biosynthetic peptidoglycan
                     transglycosylase"
                     /protein_id="HWX72981.1"
                     /translation="MRATKRAGARAWLQPGWRRFLFGCAVVVLLLLALPYLLAPLYRF
                     VQPVSTPMLWRWATGARVERIVVPLERISPALPLAVIIAEDGTFCRNRGIDLGAMREA
                     IEQADDDFGGARGGSTITQQTAKNLFLWPGRSFVRKALEIPLALWINLVLPKRRILEI
                     YLNIAEWGPHGEFGAEAAARWAFGKSARDLTAPEAAELAAVLPNPVRRSARTPTTIVR
                     RLAGVYERRAAAHPAFDACVRAH"
     gene            complement(4431..4748)
                     /locus_tag="VNY79_10805"
     CDS             complement(4431..4748)
                     /locus_tag="VNY79_10805"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72982.1"
                     /translation="MIRFLLRFIGLCLLATAFVFFVYDGTESIANQRLLYTNVEKAWA
                     MVDQNSLNGAEEWVKQRALWAWDPYLQRLVDLPAWVVLGFVAMILILLGRKKKPLIGY
                     ARN"
BASE COUNT          800 a         1571 c         1634 g          821 t
ORIGIN      
        1 gacggagtcc gggaagttgg ttcgcggtcg cagcgggatc gccaaagatc gcccgctcca
       61 gatcgcgctg cactaggtca gcgagtcttt tgcatttctc gtcatcggtg ctcatcgccg
      121 cgacgatacg acaaacacgg agccagcggt ctgcgccctc gcgtccctga tctcgatcgc
      181 gcgcgcggcg ggctcgtggc cctccgcaac ctccaccgcc cgcgccgttc cctgcttgcg
      241 cagttgcgca gctcgagccc gatgctgatc cggcgtcatc aggttcatcc caaactgggg
      301 ttcgctcatc gcccggacga tatatttggc tttggcggta cactcttgcc gaacctaact
      361 gcaaaatcct ctagactctc gttcatgccc cgctttcgag cggcttcaat gaatcgctgg
      421 aattgctctg gatcacgctc tttcggtttc ctttttcgct ttgcgtcgac ttttgtcatt
      481 ggaccacccg gtaattgaga cgttagagaa gtgcttgcga gcttattgcc cgcaagcgaa
      541 ttaggacagc gggaaattca gacgggattg ccttcgccgg gccgagtcaa agacgttgat
      601 ggccggaacg ggtccggcca tgacggcatg attgtcggct cacaccgcct gcgccctgct
      661 ggcgagccac ggccgctcga gcgaggtgag gccgacatgc gcgccctgca gatactcgca
      721 gccccaggct tccagcgtct tggcggtgcg ctcgtcctgc acccattcgg caacggtggc
      781 gaggccgaga cgccgggcga gatcgatcag cgtgcgcacg aaggcacgat catcctcgga
      841 gcggatgaga ttttccacga aggcgccgtc gatcttgacg atatcgacgc cgagcttgcg
      901 caggttgcgg aacgaggtgt agccggcgcc gaaatcgtcg atggcgatgc ggcagccgag
      961 atccttgacg cgggcgacga agccgcgcgt ctcgtcgacg tcgtggatgg cggcgctctc
     1021 ggtgatttcg acgatcaggc gttcggacac gccggcatgg gtgcgcagca gcgaatcgag
     1081 ccccgcccac caatcgggat cggtggtcga ggccggtgag acgttgacgc tcgcctgcag
     1141 cgccggcgcc gcggcgagct cgctgacgac gagctcgagc acccggtggt cgaggaaacg
     1201 caccaggccg aggcgctcgg cgaccggcac cacgtcgctc gccccgagca gggtgccgtc
     1261 ggtgcgccgc acccgcatca ggcattcgta gaaggccggc agatgctcgc caccaccgtt
     1321 tcgtaggcaa ggaagatgcg ccgttcgttg agcgcggcga cgatctcgtc ggtggcgcgc
     1381 atgttgtcgc ggcgcagcgc gtcgcgctcg agattgggcc gataggcgaa gaatgagccc
     1441 cgccgcttgc ccttcgccgc gtcgagcgcc tccttccttg gcgcgggcca gaacctccgg
     1501 cacgctgcgc gcgtgacgcg gcgccgtcac cccgccgatc gttaccgtca cggcgaccgg
     1561 accggcggcc gtcggcacca tctcgtcgcg gactccggca agcaggcgat cggcggcggt
     1621 cgccatgtcg tccggcgtgc attcggtgag cacgataccg aacttggtgc cggaatagcg
     1681 gccgagcgaa tccttgccgc gcatccggcc gcggatgcgc ttggcgaccg cagcgatgac
     1741 ctcatcggca atatcgaagc cgtaggaatc gttgatgcga ccgagattgt cgatcgcgac
     1801 cagcaggaac ccgcaggagg aacgggatcg catggcctct cccagcgtct tctccaggat
     1861 caccgtcagc tgatgccggt tcaactcgcc ggtgaggctg tcgtggtagg cgagatagct
     1921 gagccggctg tcgctctcgt ggcgctcagt gacgacgcgc acggtcccgt gcacgcgcgc
     1981 cggccggccg ccggcgccag cgaaccagcg gccgctgtcc tcgatccaga gtttggcgcc
     2041 ggagccggaa tcggggcgga tgcagtactc cgtctggaag aagccgccgc ggccctcgtc
     2101 gcgctggtcg gtctgcatga cggcatcgaa tcgggcctgc acattggccg cgtcgagcaa
     2161 ctgcgcgtag cggcggccgg ttgagatcgt ggcgacgtcc gcgacgcaca gcacgtcgag
     2221 gacgttcggg ctccagacca gcgcgtcgct ctcgatgtcc caatgataga gcgccgcgcc
     2281 caccgaggcg agaatgtcgg cggcgtcgag cttggcggcg atgttcgggc ctgacgggat
     2341 gctgtgtgcc gctccggccg gcatgattgg ttcgccgggg ctcgcatctt gcggaccgtt
     2401 tccgctcacg gtcgcctctt tgacatgggc tgcagtccgc agatggcgac ggcagacggc
     2461 cggttcgcgc gggaaactat cggggatact ttaacgaaat cgggaatctc gcggccgaat
     2521 tggaccggcg ccgcggcgcg cggcttgcgc gcgccaggct cgaagcggtt cgaccgtctc
     2581 aatccggcac agacgcccca tgagccaggc gctcgttccc atcgcgccgg cccgcggtgc
     2641 ggcttcggcg cggccggctt gcaccccgcg ggccgatttc gtcgctcacc tgatcgccgg
     2701 ctgcttgcag gccccagacg cgcgcccggc gtcgcgccga acctgcagac gcgatcgccg
     2761 cctttggcgc gctcggccaa tggccgacgc cggcgcggcg cgtgctgtca cgcgctctct
     2821 gaaccgatcg gctttttgct gcgaccggcg gagccttgcc gcctcaggcg ggcccctcgg
     2881 cctggatttc gacctggcgc tgcgacgtgc ggacgctgac agtgaagccg accaggacgt
     2941 cgaccaggct gatgatcagc agcaggaaga aggtcgaggt gccggcccgc tccaccagca
     3001 ggaattccac cagcatgacg atgaacaacg ccatcgccag catgtggtcg atgatcgtcc
     3061 tgatcccgat gcgcgtcgct ttcatgatct cgacggcgag gagcagaatg gcgaaaccga
     3121 caatgatgtc ttcccaggtc agcacccaat cctgcccgga catcatgtgc acggtcgtca
     3181 ccgtcgcggt ccagctcacg ccgggggtga tgaaggcgat gatgttgtag acggcgaacg
     3241 gaatgagcag cagcggaaag cccagaacaa acatggcgcg cgtccttatg cgaatcgtac
     3301 gcgttcatga cagggcgagg gcgggcctgg ctggcgaaga agccgatccg ccgacagtcg
     3361 tcttagtcta tccgcctcct gccccattcg ccaccgtgca ggcgcgcgcg gatggcgttc
     3421 tacgcctcgg tcttcttgtc cagcacctgc cggccgcgat acatgccggt cttgaggtcg
     3481 atgtgatgcg ggcggcgtag ttcgccggaa tccttgtcct cgatataggt cgggcgtttc
     3541 agcgcatccg ccgatcgccg catgccgcgc cgcgacggcg atgttttcct cttcggcacg
     3601 gccatgaccg tctctcctca cgttcgctca aatcgcgtcc cgaccgggcg caagccggcg
     3661 cttcggcgcg gtccggaacg gcggcaagcg ggcttataga ggaacgcctt cggtgacgct
     3721 agtgggcgcg gacgcaggcg tcgaacgccg ggtgagcggc ggcgcggcgc tcgtacacgc
     3781 cggcaagccg gcgcacgatg gtggtcggcg tgcgggcgct gcggcgtacc gggttcggca
     3841 ggaccgcggc gagttccgcg gcctccggcg cggtgagatc gcgtgccgat ttgccgaacg
     3901 cccagcgcgc ggccgcctca gcgccgaact cgccgtgcgg gccccattcc gcgatgttga
     3961 gatagatttc gagaatgcgc cgcttgggca ggaccaggtt gatccagagc gccagcggga
     4021 tttccagcgc cttgcgcacg aagctgcgcc cgggccacag aaacaggttc ttggccgttt
     4081 gctgggtgat ggtggaaccg ccgcgcgccc cgccgaaatc gtcgtcggcc tgctcgatgg
     4141 cctcgcgcat cgcgccgagg tcgatgccgc gattgcggca gaaggtgccg tcttcggcga
     4201 tgatgacggc gagcggcagt gccggggaaa tgcgttcgag cgggacgacg atgcgttcga
     4261 cgcgcgctcc cgtggcccac cgccacagca tcggcgtcga gaccggctgc acgaaccggt
     4321 acagtggggc gagcaggtag gggagcgcca gcagcaggag gacgacgaca gcgcaaccga
     4381 agaggaagcg tcgccatccc ggctgtagcc aagcgcgcgc accggcgcgc ttagttgcgc
     4441 gcatagccga tgagcggctt cttcttgcgg ccgaggagaa tgaggatcat ggcgacgaag
     4501 ccgagaacga cccaggccgg caggtcgacc aggcgttgca ggtacgggtc ccaggcccac
     4561 aaggctcgct gcttcaccca ttcctcggcg ccattgaggc tgttctgatc gaccatggcc
     4621 caagcctttt cgacgttcgt gtagagcagg cgctggttgg cgatcgattc cgtcccgtca
     4681 tagacgaaga agacgaaggc ggtcgccagc aggcagaggc cgatgaagcg aagcaggaac
     4741 ctgatcatgc ggacgtcggt gggctgcgga tcgtatcgcc gagggacgca ttactacccc
     4801 gcaccggctt gttcaatgcg ccaaag
//
LOCUS       DATMQB010000377         5386 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2041158, whole genome shotgun sequence.
ACCESSION   DATMQB010000377 DATMQB010000000
VERSION     DATMQB010000377.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5386)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5386)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5386
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2041158"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..320)
                     /locus_tag="VNY79_10810"
     CDS             complement(<1..320)
                     /locus_tag="VNY79_10810"
                     /inference="COORDINATES: protein motif:HMM:NF013088.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HWX72983.1"
                     /translation="MTVQENRGPAGAAVGAGDVQARLMLVGVCLSWGVTWPVMRIALN
                     EIPPLSMRASTAGIGTLTMLAICLVTRRSLRLRFGKTWLHAIAASLLNVVAFSLLSAF
                     AQIET"
     gene            complement(317..1240)
                     /locus_tag="VNY79_10815"
     CDS             complement(317..1240)
                     /locus_tag="VNY79_10815"
                     /inference="COORDINATES: protein motif:HMM:NF013672.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase family protein"
                     /protein_id="HWX72984.1"
                     /translation="MTKQPKKRARTPGQPMLPADRLDYSPITERAPLSLPDGARMVVW
                     VIVNVEEWDPTQPMPRTVLPPPAGGSPSPDVPNWAWHEYGNRVGFWRFTKIFDEFDIP
                     VVLAINGAALAAYPPIVRAACERDWEFMGHGFTQRNMQKVADERADIRKTRDVIAKAT
                     GKPPRGWLGPGLTETWETPDLLAEEGYDYVADWVLDDQPVWLKTRGRPILNLPYTQEI
                     NDVAMIAVQQHAALEYRERALDQFEQIYADAADSARVMALVVHPYLMGVPHRVKYLRG
                     VFEIIRQKRDVLFWTGAQIVDWYRAAGPAAP"
     gene            1352..3175
                     /gene="recQ"
                     /locus_tag="VNY79_10820"
     CDS             1352..3175
                     /gene="recQ"
                     /locus_tag="VNY79_10820"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016918401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HWX72985.1"
                     /translation="MPDLAAAQRILRTTFGFEAFRAGQGEIIAAVLDGRDVLAVMPTG
                     SGKSLCYQLPALLRDGVTVVVSPLIALMRNQVAQLCGYGIAAAALNSANDPAENRSVL
                     DRIVRGELRLVYVAPERLVKPETLGLLTRAKVSLLAVDEAHCISQWGHDFRPEYAALG
                     TVQAALGGVQTVAFTATADAATRTDILEKLFPRAPAVFVHGFDRPNLRLAMQAKSSGR
                     RQITDFIKAHHGQSGIVYCASRRKTEELADVLRQSGVNALPYHAGMEATVRSRHQDTF
                     LQEDGIVVTATVAFGMGIDKPDVRFVLHADMPANIENYYQEIGRAGRDGLPADTLTLY
                     GMGDIRLRRLQIDDGEASNEQKRVDRQRLNALVALCESPRCRRQTLLAYFAEACGPCG
                     NCDFCCDGAEVIDGTIAAQKALSAMVRTGERFGTEHLVNVLLGENSEAVEKFGHDRLP
                     TFGVGKEYDRREWRSIFRQLHGAGIVALDITGYGTWTVTDAGRRVLKGVERITLRKDT
                     LKPGRKAARTATHAAALADGAAGDTALFEALRRRRSELAKEQRVAAYVVFADKTLIDM
                     ARRKPRTAAEMANVHGVGDAKLRQYGDIFLDVIRQHTAGAA"
     gene            3402..3962
                     /locus_tag="VNY79_10825"
     CDS             3402..3962
                     /locus_tag="VNY79_10825"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HWX72986.1"
                     /translation="MAAEAPHVSGMAGRYATALFDLAREEKAIDAVKADLERFDALVA
                     ESADLNRLVRSPVFSAVEQLQALSAVLERAGIGGLAAKFLKLVTANRRLFAVRDMVKA
                     FRALVAGHKGEATAEVTVAEQLKDEHLAALRSALKAVSGKDVDLAVTIDPAIIGGLVV
                     KLGSRMVDSSLRTKLNALRHAMKEVR"
     gene            3962..>5386
                     /gene="atpA"
                     /locus_tag="VNY79_10830"
     CDS             3962..>5386
                     /gene="atpA"
                     /locus_tag="VNY79_10830"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012317612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000275 - mitochondrial
                     proton-transporting ATP synthase complex, catalytic sector
                     F(1) [Evidence IEA];
                     GO_component: GO:0045261 - proton-transporting ATP
                     synthase complex, catalytic core F(1) [Evidence IEA];
                     GO_component: GO:0045262 - plasma membrane
                     proton-transporting ATP synthase complex, catalytic core
                     F(1) [Evidence IEA];
                     GO_function: GO:0046933 - proton-transporting ATP synthase
                     activity, rotational mechanism [Evidence IEA];
                     GO_process: GO:0015986 - proton motive force-driven ATP
                     synthesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HWX72987.1"
                     /translation="MDIRAAEISAILREQIKNFGEEAEVSEVGQVLSVGDGVARVYGL
                     DNVQSGEMVEFESGVRGMALNLESDNVGVVIFGGDREIMEGQTVKRTRAIVEVPVGKG
                     LLGRVVDALGDPIDGRGPIKADTRARVDVKAPGIIPRKSVHEPMATGLKAIDALIPIG
                     RGQRELIIGDRQTGKTAIALDTILNQKSLNTSGDEKIKLYCVYVAIGQKRSTVAQFVK
                     VLEENGALDYSIVVAATASDPAPMQYLAPFSGCAMGEYFRDNGMHAVIIYDDLSKQAV
                     AYRQMSLLLRRPPGREAYPGDVFYLHSRLLERAAKMNDDHKGGSLTALPVIETQANDV
                     SAYIPTNVISITDGQIFLETDLFYQGIRPAVNVGLSVSRVGSAAQTKAMKKVAGRIKG
                     ELAQYREMAAFAQFGSDLDATTQRLLNRGSRLTELLKQPQFSPLKMEEQVCVIYSGVN
                     GYLDPLPVERVRAFEDGLLGTLRSR"
BASE COUNT          902 a         1812 c         1809 g          863 t
ORIGIN      
        1 gtctcgatct gcgcgaaggc gctgagcagg ctgaaggcga cgacgttgag cagcgaggcg
       61 gcgatcgcgt gcagccatgt cttgccgaag cgaaggcgca ggctgcggcg ggtgacgagg
      121 cagatcgcga gcatcgtcag cgtgccgata ccggcggtcg aagcgcgcat gctcaacggc
      181 gggatttcgt tgagcgcgat cctcatgacc ggccaagtga cgccccagct gaggcagacg
      241 ccgacgagca tcaatctcgc ctgcacgtcg ccggcgccca cggccgcgcc ggcgggaccg
      301 cgattttcct gaacggtcac ggcgccgccg gtccggcggc gcgataccag tcgacgatct
      361 gtgcgccggt ccagaacagc acgtcgcgct tctggcggat gatctcgaac acaccgcgca
      421 ggtacttcac ccggtgcggc acgcccatca gatagggatg caccaccagc gccatgacgc
      481 gcgccgagtc ggccgcgtcg gcgtagatct gctcgaactg gtcgagcgcg cgttcgcgat
      541 attccaaggc ggcgtgctgc tgaaccgcga tcatcgcgac atcgttgatt tcctgcgtgt
      601 aaggcaggtt gaggatcggc ctgccgcgcg tcttgagcca gaccggctga tcgtcgagca
      661 cccagtcggc gacgtagtcg tatccttcct cggcgaggag gtcgggggtc tcccaggtct
      721 cggtgaggcc cggcccgagc cagccgcgcg gcggcttgcc ggtcgccttg gcgatcacat
      781 cgcgcgtctt cctgatgtcg gcgcgctcgt cggcgacctt ctgcatgttg cgctgggtga
      841 agccgtgccc catgaactcc cagtcgcgtt cgcaggccgc gcgcacgatc ggcggatagg
      901 cggcgagcgc cgcgccgttg atcgcgagca cgacaggaat gtcgaactcg tcgaagatct
      961 tggtgaagcg ccagaagccg acgcgattgc cgtattcgtg ccaggcccag ttgggcacgt
     1021 cgggactggg cgagcctccg gcgggcggcg gcagcacggt gcgcggcatc ggttgcgtcg
     1081 ggtcccactc ctcgacgttg acgatcaccc ataccaccat gcgcgcgccg tccggcaggc
     1141 tgagcggtgc acgctcggtg atcggcgaat agtcgaggcg gtccgccggc agcatcggct
     1201 gccccggcgt tcgcgctcgt ttcttcggct gtttggtcat ggctcgactt gtgccgatgc
     1261 gtcgcgccgg tggtttcgcg tttcaacgcg gctgagatgg cttgcgaggc tgagggaaca
     1321 aagatagaac cggcgcgagg gacatacgca tatgccggac ctcgcggccg cgcaacgcat
     1381 acttcgtacg accttcggct tcgaggcgtt ccgcgccggg cagggcgaga tcatcgccgc
     1441 tgtcctcgac ggccgcgacg ttctcgcggt catgccgacg ggaagcggca agtcgctgtg
     1501 ctaccagctt ccggcgctgc ttcgcgacgg cgtcaccgtc gtcgtgtcgc cgctgattgc
     1561 gctcatgcgc aaccaggtgg cgcaactctg cggctacggc atcgccgcgg cggcgctcaa
     1621 ctcggcgaac gatcccgccg agaaccgttc ggtcctcgac cgcatcgtgc gcggtgaatt
     1681 gcgtctcgtc tatgtggcgc ccgaacgcct agtgaagccg gaaacactcg gcctgctcac
     1741 acgcgccaag gtctcgctgc tcgccgtcga cgaagcgcac tgcatctcgc aatggggcca
     1801 cgattttcgt ccggaatacg cggcgctcgg caccgttcag gcggcgctcg gcggcgtgca
     1861 gaccgtcgcc ttcaccgcca cggcggatgc cgccacgcgc accgacattc tggaaaagct
     1921 cttccctcgg gcgccggcgg tattcgtgca cggctttgac cggcccaacc tgcgcctggc
     1981 catgcaagcg aaatcgtccg gccgccggca gatcaccgat ttcatcaagg cccatcacgg
     2041 ccagagcggc atcgtctatt gcgcctcgcg gcgcaagacc gaggaactcg ccgacgttct
     2101 gcgacagagc ggtgtcaacg cgctcccgta tcacgccggc atggaggcga cggtccgctc
     2161 gcggcatcag gatacgttcc tgcaggaaga tggaatcgtc gtgacggcga cggtggcgtt
     2221 cgggatgggg atcgacaagc cggacgtgcg cttcgtcctt cacgccgaca tgcccgccaa
     2281 catcgagaac tattaccagg agatcggccg cgccggccgc gacggtctgc ccgccgatac
     2341 gctcaccctc tacggcatgg gcgacatccg gctgcggcgg ctgcagatcg acgacggcga
     2401 agcctcgaac gagcagaagc gcgtcgaccg ccagcggctc aacgcgctcg tcgcgctgtg
     2461 cgagtcgccg cgctgccgcc ggcagacgct gctcgcctat ttcgctgagg cgtgcggccc
     2521 gtgcggcaat tgcgatttct gctgcgacgg cgccgaggtg atcgacggca ccatcgcggc
     2581 gcagaaggcg ctctccgcca tggtgcgcac cggcgagcgc ttcggcaccg aacacctggt
     2641 caacgtgctt ctcggcgaga acagcgaagc ggtagaaaaa ttcggccacg atcgcctgcc
     2701 gaccttcggc gtcggcaagg agtacgacag gcgggaatgg cgttcgattt tccgccagct
     2761 tcacggcgcc ggcatcgtcg cgctcgatat taccggctac ggcacttgga ccgttaccga
     2821 tgccggccga cgggtgctca agggcgtcga gcggatcacg ctgcgcaagg acacgctcaa
     2881 gccggggcgc aaggcggcgc ggacggcgac ccatgccgcg gcgctcgccg acggggccgc
     2941 cggcgatacg gcgctgttcg aggcgctgcg gcggcgacgc tccgaattgg ccaaggagca
     3001 gcgtgtcgcc gcctatgtcg tgttcgccga caagacgctc atcgacatgg cgcggcgcaa
     3061 gccgaggacc gccgccgaga tggcaaatgt gcacggcgtc ggcgacgcca agctcaggca
     3121 gtacggggat attttcctcg acgtgatccg gcagcacacc gccggcgccg cctagtgcac
     3181 ccggtgaaat cgacacgccc ggcggccgct ttcgttgtga ttccgtgatg ttgcaccgca
     3241 ttccacggta tgttagcaac gccgcaattt cgcggggccg cggacactcc gctgccttcc
     3301 attttcaggt ccgccgcagc caagggctcg atccccgagg cttgcgctga ctgcccgcgc
     3361 cggttgcggc tccgcgagaa cgcacgacga gagcaaacga tttggccgcc gaagcacccc
     3421 acgtatccgg catggccggc cgctacgcga ccgcgctgtt cgacctcgcc cgcgaggaga
     3481 aggcgatcga cgcagtcaag gcggatctgg agcgcttcga tgcgctggtc gcggagagcg
     3541 ccgatctcaa ccggctggtg cgcagcccgg tgttttccgc cgtcgagcag ctgcaggcgc
     3601 tctccgcggt gctcgagcgc gccgggatcg gcgggcttgc ggcgaaattc ctcaagcttg
     3661 tcaccgcgaa ccgccgcctg ttcgcggtgc gcgacatggt gaaggcgttc cgcgcgctcg
     3721 tggccggcca caagggcgag gcgacggcgg aggtcacggt cgccgagcag ctcaaggacg
     3781 aacacctggc cgcgctgcgc agcgccctca aggcggtcag cggcaaggat gtcgacctcg
     3841 ccgtcacgat cgatcccgcc atcatcggcg ggctcgtggt caagctcggc agccgcatgg
     3901 tcgacagctc gctacgcacc aagctcaatg cgctcaggca cgcgatgaaa gaggtccgat
     3961 aatggatatc cgcgccgcgg aaatctccgc catcctcagg gagcagatca agaatttcgg
     4021 cgaggaggcc gaggtctcgg aagtgggcca ggtgctgtcg gtcggcgacg gcgtcgcccg
     4081 cgtctacggg ctcgacaatg tgcagtccgg cgagatggtc gaattcgaga gcggcgtgcg
     4141 cggcatggcg ctcaacctcg aaagcgacaa tgtcggcgtc gtgatcttcg gcggcgaccg
     4201 cgagatcatg gagggccaga ccgtcaagcg cacgcgcgcc atcgtcgagg ttccggtcgg
     4261 caaggggctg ctcggccgcg tcgtcgacgc gctcggcgat ccgatcgacg gccgcggccc
     4321 gatcaaggcc gacacccgcg cgcgcgtcga tgtcaaggcg cccggcatca tcccgcgcaa
     4381 gtcggtgcac gagccgatgg ccacggggct gaaggcgatc gacgccctga tcccgatcgg
     4441 gcgcggccag cgcgagctga tcatcggcga ccgccagacc ggcaagaccg cgatcgccct
     4501 cgacacgatc ctgaaccaga agtcgctgaa cacctcgggc gacgagaaaa tcaagctcta
     4561 ttgcgtctat gtcgcgatcg gacagaagcg ctcgaccgtg gcgcagttcg tcaaggtgct
     4621 ggaggaaaac ggcgcgctcg actactcgat cgtggtggcg gcaaccgcct ccgacccggc
     4681 gccgatgcag tatctggcgc cgttctccgg ctgcgccatg ggcgagtatt tccgcgacaa
     4741 cggcatgcac gccgtcatca tctatgacga cctttccaag caggccgtcg cctaccggca
     4801 gatgtcgctc ttgctgcgcc ggccgcccgg acgcgaggcc tatccgggcg acgtcttcta
     4861 cctgcactcg cggctgctcg agcgcgcggc gaagatgaac gacgaccaca agggcggctc
     4921 gctcaccgcg ctgccggtca tcgaaacgca ggccaacgac gtgtcggcct atatcccgac
     4981 caacgtcatc tccatcaccg acggccagat cttcctggag accgatctgt tctatcaggg
     5041 catccgcccg gcggtgaacg tcgggctgtc ggtgtcgcgc gtcggctccg cggcgcagac
     5101 caaggcgatg aagaaggtcg ccggccgcat caagggcgag ctggcgcagt accgcgagat
     5161 ggcggctttc gcgcagttcg gctccgatct cgacgccacc acgcaacgcc tgctcaatcg
     5221 cggctcgcgc ctgaccgagc tgctcaagca gccgcaattc tcgccgctga agatggagga
     5281 gcaggtctgc gtgatctact ccggcgtcaa cggctatctc gatccgctgc cggtcgagcg
     5341 cgtgcgcgct ttcgaggacg gcctgctcgg cacgctgcgc agccgg
//
LOCUS       DATMQB010000378         3120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_794887, whole genome shotgun sequence.
ACCESSION   DATMQB010000378 DATMQB010000000
VERSION     DATMQB010000378.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3120
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_794887"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..214
                     /locus_tag="VNY79_10835"
     CDS             <1..214
                     /locus_tag="VNY79_10835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011505174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="metal-sensitive transcriptional regulator"
                     /protein_id="HWX72988.1"
                     /translation="GLARMVEDDRYCIDVVTQVSAVRAALRRAEEEILADHVAHCVEH
                     AIASGNKAEQRRKVSELMDVVTRAER"
     gene            489..743
                     /locus_tag="VNY79_10840"
     CDS             489..743
                     /locus_tag="VNY79_10840"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX72989.1"
                     /translation="MLTSPGTTDPALRGAAYRGDAVPGLLAGYLVKVRTQSYRVTDDD
                     VNRMLTDGYSEDAVFELTIATALGAAHRQLEAGLRALQGN"
     gene            746..1345
                     /locus_tag="VNY79_10845"
     CDS             746..1345
                     /locus_tag="VNY79_10845"
                     /inference="COORDINATES: protein motif:HMM:TIGR01926.1"
                     /note="This protein belongs to a clade of uncharacterized
                     proteins related to peroxidases such as the
                     alkylhydroperoxidase AhpD; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology.
                     GO_function: GO:0051920 - peroxiredoxin activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peroxidase-related enzyme"
                     /protein_id="HWX72990.1"
                     /translation="MRLRVLDSGHRLRGRMFFWLMRAVAGTEDAVAKTSLYRPSFFGR
                     ALLRFIRSAMRGQSDWSAGERELFAALVSRLNSCPFCVSVHVGITALALNPTITAEQL
                     DHWRDIGLRSQVAATLAFLEKVTLHPDQVGVADVQPLRAAGVSEAAIVDALHVCFLFN
                     VVNRLANSFGYDWGNEANALKGAAILNRIGYRVPEFLMR"
     gene            complement(1451..2470)
                     /locus_tag="VNY79_10850"
     CDS             complement(1451..2470)
                     /locus_tag="VNY79_10850"
                     /EC_number="2.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003871 -
                     5-methyltetrahydropteroyltriglutamate-homocysteine
                     S-methyltransferase activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0009086 - methionine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methionine synthase"
                     /protein_id="HWX72991.1"
                     /translation="MFPTTVAGSLPKPSWLAEPNKLWALWRLQGDALAQAKDDATLLA
                     LKVQEDAGIDIVGDGEQARQHFVHGFLEAVEGIDFERRVEMGIRADRYKAMCPTVTGP
                     LRLRSRVHAREARLARAHTRKQLKFTLPGPMTIVDTIADTHYGDRVTMAMAFAALLNE
                     EARGLAADGVEVIQFDEPAFNVYMDDAAGWGIAALHRAIEGVSATTAVHICYGYGIPA
                     NIEWKATLGGEWRQYEKFFPALAASRIDQVSLECINSHVPMSVLKLLDGKDVLLGVID
                     VATDTIETPDEVAAVIAQATDYVPKERIVACTNCGMAPMRRDIAAKKLAALAQGAALA
                     RERFG"
     gene            complement(2557..2922)
                     /locus_tag="VNY79_10855"
     CDS             complement(2557..2922)
                     /locus_tag="VNY79_10855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014327547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HWX72992.1"
                     /translation="MSYQAINFARKFGLFDEQWQPKVIAEMNDYQFKIVKLQGDFIWH
                     DHHDTDEAFIVLDGSLRIDFRDGAVQLSAGEMFVVPKGVEHKPYAEREVKLLLVEPRG
                     VRNTGHASGARTAANDVWI"
BASE COUNT          520 a         1007 c         1010 g          583 t
ORIGIN      
        1 cggcttggcg cgcatggtcg aggacgaccg ctactgcatc gacgtcgtca cccaggtttc
       61 ggcggtgcgt gccgctttgc ggcgtgccga ggaggagatt ctggccgacc atgtcgccca
      121 ttgcgtcgag cacgcgatcg cgtccggcaa caaggccgaa cagcggcgca aggtttccga
      181 gctgatggac gtggtcacgc gcgccgagcg ctgacgggcg gcaagccttt cgcgccgtaa
      241 atgttccagg acggttgcag atcgaagcaa ctctgctcca agggacgaac caacaaactc
      301 gctctacaat ccagtgcgca caccctctag aataccggtg cgcgataggg cgctgcgtgc
      361 gaccgctgaa agaacctgcc gcgcgcgggc tcccgttcag agggaggcta cgggtgtcaa
      421 ggtcaactgc agacggcgag gccgctcata ggcggcacgc cgatgaaata gctgcgctgc
      481 tgcaagcagt gctgacgtcg ccgggcacca ccgaccccgc cctgcgcgga gccgcgtatc
      541 gcggcgatgc cgttccgggc ctgctcgccg gctacctcgt gaaggttcgc acccagtctt
      601 atcgagttac cgatgacgac gtaaatcgga tgctgaccga cggctattcc gaggacgcgg
      661 ttttcgagct caccattgcg accgcacttg gcgcggcgca tcggcaactt gaagccggct
      721 tgcgcgcgtt gcaaggaaat tagccatgcg gctgcgcgtg ctcgacagcg gccatcgcct
      781 gcgcggccgg atgttttttt ggctgatgcg cgcggttgcg ggcaccgagg acgccgtggc
      841 caagacatcg ctctaccggc ccagcttctt cgggcgggcg ttgctgcgct tcatccgctc
      901 ggcaatgcgc ggccaatcgg actggtcagc cggcgagcgc gaactctttg ctgcactcgt
      961 ctcccgcctg aacagctgcc cgttctgcgt gagcgtccac gtcggcatca ccgcgctggc
     1021 gctcaatccc accatcacag cggagcagct cgaccattgg cgcgacatcg ggttgcggtc
     1081 gcaggtcgcg gcaacgctcg cgttcctgga gaaggtcacg cttcatcccg atcaagtcgg
     1141 cgtcgccgat gtacagcccc tgcgcgccgc cggggtttcc gaagcggcga tcgttgacgc
     1201 attgcacgtc tgcttcctgt tcaatgtggt caaccgcctg gccaattctt tcggctacga
     1261 ttggggaaat gaagccaacg ccctcaaggg tgcggcaatt ctgaatcgta ttggttaccg
     1321 cgtgcccgaa ttcctgatgc ggtgagccgc gcgcgatttc gctgcgattt tttcagattc
     1381 accgcggcga ggaacgtgga tgatcggatg actcgtgtct gtgctcagcg tgcggctgcg
     1441 gcggcggcga tcaaccgaat ctctcccgcg ccagcgccgc gccctgggca agcgctgcga
     1501 gtttcttcgc ggcgatgtcg cgccgcatcg gcgccatgcc gcaattggtg caggcgacga
     1561 tccgctcctt gggcacatag tcggtcgcct gggcgatcac cgcggcgacc tcgtcgggcg
     1621 tctcgatcgt gtcggtcgca acatcgatga cgccgaggag gacgtccttg ccgtcgagca
     1681 gcttgagcac gctcatcggc acgtgcgagt tgatgcactc gagcgagacc tgatcgatgc
     1741 gactcgcggc gagcgccggg aaaaatttct catactgccg ccattcgccg ccgagcgtcg
     1801 ccttccattc gatgttggcg ggaatgccgt agccgtagca gatgtgcacg gcggtcgtcg
     1861 cgctgacacc ctcgatggcg cggtggagcg ctgcgatccc ccagccggcg gcatcgtcca
     1921 tgtagacatt gaacgccggc tcgtcgaact ggatcacctc gacgccgtcg gcggcgagcc
     1981 cgcgggcttc ctcgttgagc agcgccgcaa acgccatcgc catcgtgacg cggtcgccgt
     2041 agtgggtatc ggcaatcgta tcgacgatgg tcatcgggcc gggcagggtg aatttgagct
     2101 gcttgcgcgt atgggcgcgg gcaagacgcg cctcgcgcgc atgcacccgc gagcgcagcc
     2161 gcagcggccc ggtgacggtc ggacacatcg ccttgtagcg gtcggcgcgg atgcccatct
     2221 cgacgcgccg ttcgaagtcg atgccctcga ccgcttcgag aaagccgtgc acgaagtgct
     2281 ggcgcgcctg ctcgccgtca ccgacgatgt cgatgccggc atcctcctgc accttcagcg
     2341 cgagcagcgt cgcgtcatcc ttcgcttgcg cgagcgcgtc gccttggagc cgccacagcg
     2401 cccacagctt gttcggttcc gcgagccagg acggtttcgg caagctgccg gcgactgtgg
     2461 tcggaaacaa ggggagggcg gcgcttggtg acaacgggag cacctgctgg gctggtgttt
     2521 cacaaggtcg gaagttcgcg ggcggcgttc atggcgtcaa atccagacat cattcgcggc
     2581 ggtccgcgcg ccgctggcat gcccggtatt gcggacgccg cgcggctcga cgagcagcag
     2641 cttgacctca cgctcggcat acggcttgtg ctcgacgccc ttcggcacaa cgaacatctc
     2701 gccggccgag agctgaacgg cgccgtcgcg aaaatcgatc cgcagcgagc cgtcgagcac
     2761 gatgaacgcc tcgtcggtgt cgtggtgatc gtgccagatg aagtcgcctt gcagcttgac
     2821 gatcttgaac tgatagtcgt tcatctcggc aatgaccttc ggctgccatt gctcgtcgaa
     2881 caatccgaac tttcttgcga aattgatcgc ttggtagctc atccgggata tccgtcagtc
     2941 gcgccgcgta catttcgtca gggccattgc ggcaagcggc cgattatcgg caatcttgcc
     3001 cccgttgcgc aatcgctagg agaggcgcca tgaccgacgc ggaagctcct ccggcactcg
     3061 aattcgtctt cgcggcgcaa gtgaccgtcg accggccgct cgatctcggc gacgtgggca
//
LOCUS       DATMQB010000379         2603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_469735, whole genome shotgun sequence.
ACCESSION   DATMQB010000379 DATMQB010000000
VERSION     DATMQB010000379.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2603
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_469735"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..436
                     /locus_tag="VNY79_10860"
     CDS             <1..436
                     /locus_tag="VNY79_10860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007596745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HWX72993.1"
                     /translation="LIKAMAMIQSQSTSNPTAVAQWAAVEALDGPKDFIPKHNKIFKE
                     RRDLCVSMLNQANGIRCPKPEGAFYVYPSCSGTMGKVAPTGKKLATDEDFVTELLEAE
                     GVAVVQGTPFGQGQAFRISYATATTAVEEACARIQRFCGNLK"
     gene            572..1054
                     /locus_tag="VNY79_10865"
     CDS             572..1054
                     /locus_tag="VNY79_10865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011159863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF992 domain-containing protein"
                     /protein_id="HWX72994.1"
                     /translation="MVRIAYAAASIAAAALVAIVTPADAQPRRVQVGTLACSLSSSIG
                     LVVGSRRNVNCDFTASGVPVEHYTGTMTRIGLDIGVTTGGAIIWAVFADTDRYAAGML
                     SGTYGGASGEVSIAAGLGANVLVGGSSSTVALQPVSVQGQLGLNIAAGIGALELHNLR
                     "
     gene            1183..>2603
                     /locus_tag="VNY79_10870"
     CDS             1183..>2603
                     /locus_tag="VNY79_10870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011316150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HWX72995.1"
                     /translation="MAANANGGTRATGPRCVALVGPFQSGKTTLLEAILARTGVIQRQ
                     GTIEAGNTVGDASKEARHHRMSVELSVATTSFMGDTYTFLDCPGSVEFVHDMRAVLPA
                     IDVAVIVCELDEKKVPQLQLILRELEDRKTPRILFLNKIDKADAAVHDVLRLLQGASR
                     TKLVLRQIPTFSGEIVTGFVDLALERAFVYKEHAPSQVIPLEGDAVDREKTARFSMLE
                     TLADHDDELMEQLLEDIQPPRDKVFDDLTRELRDGLVCPVLMGTATRANGILRLLKAL
                     RHESPGAAETAKRLGVKGGADAVAYVVKTLNTTHGGKMSIARVLGGQAGDGTTLLAGD
                     DEAGRVAGVFKLVGQATEKRGPAAVGETVGFAKLDKAKTGDTLTAGKQPHPPLARIEP
                     YPPVLAIAISAKERKDDVKLGQALNKLAEEDPSITVVHNPETHEVVLWGQGEMHLRVA
                     TERLSDRYGVAIERRQPTVGYRET"
BASE COUNT          455 a          901 c          860 g          387 t
ORIGIN      
        1 gctgatcaag gcgatggcga tgatccagtc gcaatcgacc tcgaatccga ccgcggtggc
       61 gcaatgggcc gcggtcgagg cgctcgacgg gccgaaggat ttcatcccca agcacaacaa
      121 gatcttcaag gagcggcgcg atctctgcgt ctccatgctc aaccaggcga acggcatccg
      181 ctgcccgaag ccggaaggcg cgttctatgt gtacccgtcg tgcagcggca cgatgggcaa
      241 ggtggcgccg accggaaaaa agctggcaac ggacgaggat ttcgtcaccg agcttctcga
      301 ggcggaaggc gtcgcggtgg tgcagggaac gccgttcggc cagggccagg cgttccgcat
      361 ctcttacgcg acggcgacca ccgcggtcga agaggcctgc gcccgcatcc agcgcttctg
      421 cggcaatttg aaataactac ccgggccgtg cggggcagat ggcgatgccg ctgcgcccgc
      481 cccctgaatg aggagccggc gagacgccgg cttcattctc gcctacaatc cggcggcaag
      541 ggccatccgg cccgcgtgaa ggagagtgcc tatggttcgc attgcttacg cggcagcgtc
      601 gatcgccgcc gccgcgctcg tcgcgatcgt cacgccggcc gacgcccaac cgcggcgcgt
      661 tcaggtgggt acgctcgcct gttcgctctc gtcgagcatc ggactggttg tcggctcgcg
      721 acgcaatgtg aattgcgatt tcaccgcctc gggcgtgccg gtcgagcact acactggcac
      781 gatgacccgg atcgggctcg acatcggcgt gaccaccggc ggcgccatca tctgggcggt
      841 gtttgccgac accgaccgct acgccgccgg catgctcagc ggcacctatg gcggcgcttc
      901 gggcgaggtc tcgatcgccg ccggcctcgg cgccaatgtc ctggtcggcg gatcgagcag
      961 taccgtggcg ctgcagccgg tctcagtgca gggccagctc ggcctcaaca tcgccgccgg
     1021 catcggcgcc ttggaactgc ataacttgcg gtgagccgct gggcgctact cgtccagttt
     1081 ggcggcagcc gaacggccgc gcaagcgacg cggcgctgtc gcgcctcttg accagccccg
     1141 ccgacgcctg aaacgatggc tcccccaccc cgggagagag tcatggcagc caacgcaaac
     1201 ggcggcacgc gcgcgacggg cccgcgctgt gtcgcgctgg tcggtccgtt ccagagcggc
     1261 aaaaccacgc tgctcgaggc gatcctcgcg cgtaccgggg tgatccagcg ccagggcacc
     1321 atcgaggccg gcaacacggt cggagacgcc agcaaggaag cgcggcacca ccgcatgagc
     1381 gtcgagctct cggtcgccac gacaagtttc atgggcgaca cctacacttt cctcgactgt
     1441 cccggctcgg tcgagttcgt gcacgacatg cgcgcggtgc tgccggcgat cgacgtcgcg
     1501 gtgatcgtat gcgaactgga cgagaagaag gtcccgcagc ttcagctcat cctgcgcgag
     1561 ctggaagacc gcaagactcc ccgcattctg ttcctcaaca aaatcgacaa ggccgacgct
     1621 gccgtccacg acgtgctcag gctgctgcag ggcgcctcgc gcaccaagct ggtactgcgg
     1681 cagattccga ccttctccgg cgagatcgtc accggcttcg tcgatctcgc gctcgagcgc
     1741 gccttcgtct acaaggagca cgccccctcg caggtcattc cgctcgaagg cgacgccgtc
     1801 gaccgcgaga agacggcgcg cttctccatg ctggaaacgc tcgccgacca tgacgacgag
     1861 ctgatggagc aactgctcga agacatccag ccgccgcgcg acaaggtgtt cgacgatctc
     1921 acccgcgagc tgcgcgacgg gctggtgtgc ccggtgctga tgggaacggc gacgcgcgcc
     1981 aacggcatcc tgcggctgct gaaggccctg cgccatgaat cgccgggcgc tgccgagacg
     2041 gcgaaacgcc tcggcgtcaa gggcggcgcc gacgcggtcg cctatgtggt caagaccctg
     2101 aacacgaccc acggcggcaa gatgtcgatc gcccgggtgc tcggcggcca ggccggcgac
     2161 ggcaccactc ttctcgcggg ggacgacgag gccggccgcg tcgccggcgt cttcaagctg
     2221 gtcggccagg cgaccgagaa gcggggaccg gccgctgtcg gcgagaccgt cggcttcgcc
     2281 aagctcgaca aggccaagac cggcgacacg ctcactgccg gcaagcagcc gcatccaccc
     2341 ctcgccagga tcgagcctta tccgccggtt cttgccatcg ccatctcggc gaaggagcgc
     2401 aaggacgacg taaagctcgg ccaggcgctc aacaagcttg ccgaggagga tccgtcgatc
     2461 accgtcgtgc acaatccgga gacgcacgag gtggtgctct ggggccaggg cgagatgcac
     2521 ctgcgcgtcg ccaccgagcg cctcagcgac cgttacggcg tcgccatcga gcgccgccag
     2581 ccgaccgtcg gctaccgcga gac
//
LOCUS       DATMQB010000380         4809 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1108760, whole genome shotgun sequence.
ACCESSION   DATMQB010000380 DATMQB010000000
VERSION     DATMQB010000380.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4809)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4809)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4809
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1108760"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..296)
                     /locus_tag="VNY79_10875"
     CDS             complement(<1..296)
                     /locus_tag="VNY79_10875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011581443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HWX72996.1"
                     /translation="MTMLSDGKRRVAAVRRFNRFYTRQIGVLRKTFLDSPYSLAEARV
                     LYEIASSVAPTASAIGRTLDLDAGYLSRVLRNFEKRGLIQRRVSASDARQSHLAL"
     gene            complement(328..900)
                     /locus_tag="VNY79_10880"
     CDS             complement(328..900)
                     /locus_tag="VNY79_10880"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HWX72997.1"
                     /translation="MLSVIIPTLDSERALVPTLSALVPGATAGLVSDVLVVDGGSRDD
                     TAAVADVGGCNFLVAEGPLGQRLKTAVAWARAPWLLFLRPGTILDTPWIGEATHFVER
                     APPDARAAVFRRAAPAQSTLRDALSVAAAALGARVRPEQGLIISKRLYEKIGGHSESA
                     ADPEADLIHRIGRRRIVRLATRASWVGRDT"
     gene            1039..2181
                     /locus_tag="VNY79_10885"
     CDS             1039..2181
                     /locus_tag="VNY79_10885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PA0069 family radical SAM protein"
                     /protein_id="HWX72998.1"
                     /translation="MSRSSALRRPPAPLPPVAPAGESGTAVDRERRRGRGAHSNNSGR
                     YEPLARISFDDGWQAIDDLPPFKTTVTVDATRKIITRNDSPDLSFDRSINPYRGCEHG
                     CVYCFARPTHAYLGLSPGLDFESKLFMKPNAPELLERELSAPGYVPKTIAIGTNTDPY
                     QPIERRHQIMRRILEVLERAGHPVGIVTKSALVLRDLDILARMAERNLVKVAISVTTL
                     DAKLARTMEPRASTPQRRLDALRQLVKVGVPASTLVAPVIPAINDAEIERILDAVAAA
                     GVRHAGYVLLRLPLEVRDLFREWLMTNFPERYRHVFKLIRDMRGGKDYDSTFGARMTG
                     TGPIAWMIGRRFEVACERLGFNSTTVKTTTEHFRPPLPAAEQLDLF"
     gene            2551..3255
                     /locus_tag="VNY79_10890"
     CDS             2551..3255
                     /locus_tag="VNY79_10890"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011085308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004523 - RNA-DNA hybrid ribonuclease
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HWX72999.1"
                     /translation="MSRNGPKAPRLPLNEEIARPTFRRERSALKSGVWPVAGCDEAGR
                     GPLAGPVVAAAVILDPDNVPRGLDDSKRLTPERREVLYERICARAQVAVAMAPPARID
                     RDNILRASLWALARAVASLPVKPRLVFVDGRDRIDAGCECQAVIGGDGLVASIAAASI
                     VAKVTRDRLMACLGAAHPGYGFERHMGYSVPEHFAALDRLGPTVHHRRSFSPVAGALG
                     LLGTDVDDLVAGVLPL"
     gene            3265..>4809
                     /locus_tag="VNY79_10895"
     CDS             3265..>4809
                     /locus_tag="VNY79_10895"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF024629.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HWX73000.1"
                     /translation="MLYVPLYVEGLRSRPMLVFWLATLPQALLWLLVPLFFYSAPPGE
                     LPLVLAVGHEFPLNGNFGPPFAYWIAEVAFRVAGRFGVYLLSQICVVVTYWCVFTLGS
                     AIVGPVHAALTVLLMVGIYVFTVPTPDFGPPIFAMALWAVALLHYWRAVIEKRQRSWY
                     IFGAAAAFILLSSDAALILLGMLALFTALSARGRAALGGIEPWIVSVVLVVVLFVHLL
                     WLEGAVDGLTPMLARLRGAGMGEANTVAWLRVLGALAFAHAGLAILVMLGSGWPRSYS
                     PPAPALKRAPVEASAVAFMKFFALPPALLATIVAVLLGLRLPVGGSAPLVVLSALAIV
                     VAAGDSIELYHQRVIGYAWAGLLIMPAILVPAMIIVLPWAAGTDLKVTQPAAAMARFF
                     AESFERRTGRPLAIVSGDARTAALIALAAPSRPSVYFDSDPGRSPWITSADIQDKGAV
                     VVWPATNTDPTPPPEIAAHFPDLAPEVPQTFARSLQGRAPPLRIGWGMIRPANAAAPA
                     AAPAPAT"
BASE COUNT          694 a         1659 c         1604 g          852 t
ORIGIN      
        1 agcgccagat ggctttgccg ggcgtcgctc gccgaaacgc ggcgctggat caggccgcgc
       61 ttttcgaaat tgcgcagcac gcggctcaga tagccggcgt cgagatcgag cgtgcggccg
      121 attgcgcttg ccgtcggcgc gacgctgctc gcgatttcgt agagcacgcg cgcctcggcg
      181 agcgaatagg ggctgtcgag gaaggtcttg cgcaacacgc cgatctgccg cgtgtagaaa
      241 cggttgaagc ggcgcactgc ggcgacgcgg cgcttgccgt cgctgagcat ggtcatcggc
      301 gaagattcgg tcagatactt gacttagtca agtatctcgc ccgacccagc tggccctggt
      361 cgccagccgc acgatgcgtc gccggccgat gcggtggatg aggtcggcct cagggtcggc
      421 ggcactctcg gaatggccgc cgatcttttc gtaaagccgt ttggagatga tcaggccctg
      481 ctcgggacgc accctggcgc caagcgcggc ggcggcaacg gagagcgcat cgcggagcgt
      541 tgattgcgcg ggggcggcgc ggcggaatac ggcggcacgg gcatcgggcg gcgcccgctc
      601 gacaaagtgc gtcgcctcgc cgatccaggg cgtgtcgagg atcgttcccg gccgcaggaa
      661 gagaagccat ggtgcccgcg cccaagcgac agcggtcttg agccgctggc cgagcggtcc
      721 ctccgccacg aggaaattgc agccgccgac gtcggcgacc gccgccgtat cgtctcgcga
      781 gccgccgtca acgaccagca cgtcactgac gaggccagca gtggcgcccg gaaccagcgc
      841 gctcagggtc gggaccagcg cgcgttccga atcgagggtc ggaatgatga cactcagcat
      901 gggaatggaa tgaacggggc gtggcagcgc ggttgaaatc aaccccttac ggcccgcgcg
      961 acgcctttcc aacccggaac ccggggatcc cggaagtttg ttcttgtttc gttcccatta
     1021 cgcactatta taaacgccat gagtcgttcg tccgcattga gacgcccgcc ggcgccgctg
     1081 ccccccgttg cgccggcggg cgagagtggg accgccgtcg accgtgagcg ccggcgcggc
     1141 cgcggcgcgc attcgaacaa ctcggggcgc tatgagccgc tcgctcggat cagcttcgat
     1201 gatggctggc aggccatcga cgatctgccg ccgttcaaga ccacggtgac ggtcgacgcc
     1261 acgcggaaga tcatcacccg caacgattcg cccgatctgt cgttcgaccg ctcgatcaat
     1321 ccctatcgcg ggtgcgagca cggctgcgtc tattgtttcg ctcgcccgac ccacgcctat
     1381 ctcggattgt cgcccggcct cgacttcgaa tcgaagctgt tcatgaagcc gaacgcgccc
     1441 gaattgctcg agcgcgaatt gtcggcgccc ggctacgtgc cgaagaccat tgccatcggc
     1501 accaacaccg atccttacca gccgatcgag cgccggcacc agatcatgcg ccgcatcctc
     1561 gaggttttgg agcgcgccgg ccatccggtc ggcatcgtga ccaaatcggc gctggtgctg
     1621 cgcgacctcg acatcctagc gcgcatggcc gagcgcaacc tggtgaaggt ggcgatctcg
     1681 gtgacgacgc tcgatgccaa gctcgcgcgg acgatggagc cgcgcgcctc gacgccgcag
     1741 cgacggctcg acgcgctgcg ccaactggtc aaggtcggcg tgcctgcttc cactctcgtc
     1801 gctccggtca tccccgcgat caacgacgcg gagatcgagc gcatcctcga tgctgttgcc
     1861 gcggccggcg tgcgtcacgc cggctacgtg ctgctgcgac tgccgctcga ggtgcgcgac
     1921 ctgttccgtg aatggctcat gacgaatttt cccgagcgct accgccacgt gttcaagctc
     1981 atccgcgaca tgcgcggcgg caaggactac gattcgacct ttggcgcgcg catgaccggc
     2041 accggcccca tcgcctggat gatcggacgc cgcttcgagg tcgcctgcga gcggctcggc
     2101 tttaattcga caaccgtgaa gaccaccacg gaacacttcc ggccgccact gccggccgct
     2161 gagcagctcg atctgttctg agacgtcggc atgtacccat gtagcccgga tgaccgaagc
     2221 gaaatccggg gtgcgagcga atgggcaggc catggaagtg cttgagaccg cattccacaa
     2281 atactgattt cgtttggagc agacggcgcg ctgggaatga atggtcggat accggcacaa
     2341 ccgccttccc ggcggaaccg atcccgagtc gcatatggcg ctcataagct cgcaggatgc
     2401 agcagcttga gcgcgcccca tgtggtcgcg cgcggcgcag gagatcccgg atatcgcttc
     2461 gctcatccgg gctacgattc cggataacac cggactacgc agcgcacgcc acgttgcgga
     2521 gcgaaccgag gcgtggtcat gatagggtcc atgagtcgga atggacccaa ggccccgcgc
     2581 ctgccgctca acgaggagat tgcccggccg acgttccggc gcgagcgctc ggcgctcaag
     2641 agcggggtgt ggccggtcgc gggatgcgac gaggccggac gcggaccgct cgccgggccg
     2701 gtcgtcgccg ctgccgtcat tctcgatccc gataacgtgc cccgcggcct cgacgactcg
     2761 aagcggctca cgccggagcg gcgcgaggtg ctctacgaac gcatttgcgc ccgcgcgcag
     2821 gtcgcggtgg cgatggcgcc gccggcgcgc atcgatcgcg acaacatcct gcgcgcgtcg
     2881 ctgtgggcgc tcgccagggc ggtcgcctcg cttccggtaa agccgcggct cgtgttcgtc
     2941 gatggccgcg accgcatcga tgccggctgc gagtgccagg ccgtcatcgg cggcgacggc
     3001 ctcgtggcgt cgatcgcggc ggcctcgatc gtcgccaagg tcacgcgtga ccgtctcatg
     3061 gcctgtctcg gtgccgccca tcccggctac gggttcgagc gccacatggg ctacagcgtg
     3121 cccgagcact tcgctgcgct cgaccggctc ggtccgacgg tccatcatcg ccgctctttc
     3181 tcgccggtcg cgggcgcact cggcctgctg ggcaccgatg tcgacgatct cgtcgccggc
     3241 gtgctgcccc tctagtctgg gctgatgctt tacgttccgc tctacgtcga aggcttgcgc
     3301 tcgcggccca tgctggtgtt ctggctggcg acgctgccgc aggccttgct gtggctcctg
     3361 gtgccgctct tcttctactc ggcgccgccg ggcgaactcc cgctggtgct cgcggtcggt
     3421 cacgaatttc ccctcaacgg caatttcggc ccgccgttcg cctactggat cgcggaggtc
     3481 gcgttccgcg tggccggccg tttcggcgtg tatctgttgt cgcagatttg cgtggtggtg
     3541 acctactggt gcgtcttcac gctcggcagc gccattgtcg gccccgtgca tgccgcgttg
     3601 acggtgctgc tcatggtcgg gatctatgtc ttcaccgtgc cgacgcctga tttcggcccg
     3661 ccgattttcg ccatggcgct gtgggcggtc gcactgctgc actactggcg cgcggtgatc
     3721 gagaagcggc agcggtcgtg gtacatcttc ggcgccgccg ccgccttcat cctgctcagc
     3781 tccgacgccg ctctgatcct gcttggcatg ctcgcgctgt tcacggcgct cagcgcccgc
     3841 gggcgggcgg cgctcggcgg gatcgagccg tggatcgttt cggtcgtatt ggttgtcgtc
     3901 ctgttcgtgc acctgctctg gctcgaaggg gccgtcgacg gtctgacgcc gatgctcgcg
     3961 cggctgcgcg gcgcgggcat gggcgaggcc aataccgtcg cctggctgcg ggtcctcggc
     4021 gcgctcgcct tcgcccacgc cggcctcgcc attttggtga tgctcggcag cggctggccg
     4081 cgatcctact cgccgccggc gccggctctg aagcgggcgc cggtcgaggc ttcggcggtg
     4141 gccttcatga agttctttgc cttgccgccg gcgctgctgg ccacaatcgt cgccgtgctg
     4201 ctcgggctgc gcctgccagt cggcggctcc gcgccactgg tcgtgctgtc cgccctcgcc
     4261 atcgtcgtcg ccgccgggga cagcatcgag ctctaccatc aacgcgttat cggttacgcc
     4321 tgggcgggat tgctgatcat gccggcgatc ctggttccgg cgatgatcat tgtcctgccg
     4381 tgggccgccg gcaccgatct caaggtcacg cagcccgccg ccgcgatggc ccgcttcttt
     4441 gccgagagtt tcgagcgcag gaccggacgt ccgctcgcga tcgtcagcgg cgacgcccgc
     4501 acggccgcgc tcatcgcgct cgccgcgccg agccgcccca gcgtctattt cgacagcgac
     4561 ccgggacgct cgccctggat caccagcgcg gacattcagg acaagggcgc cgtcgtcgtc
     4621 tggccggcga cgaataccga cccgacaccc ccgcccgaga ttgcggcgca ctttcccgat
     4681 ctcgcccccg aagtgccgca aaccttcgcg cgctcgctgc agggcagggc gccgccgctg
     4741 cgcatcggct ggggcatgat caggccggcg aatgcggccg cgccggcggc ggctccggcg
     4801 cctgcgact
//
LOCUS       DATMQB010000381         3815 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2045415, whole genome shotgun sequence.
ACCESSION   DATMQB010000381 DATMQB010000000
VERSION     DATMQB010000381.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3815)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3815)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3815
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2045415"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..399)
                     /locus_tag="VNY79_10900"
     CDS             complement(<1..399)
                     /locus_tag="VNY79_10900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HWX73001.1"
                     /translation="MNVTHGLRRALQLNPLGIAILEGERKLTWAELGERVSRLAGALR
                     QNGVAKGDRVAVLMLNSTRYLELYLAVAWAAAIIVPLNVRWRVAENRDALEDCGARLL
                     TVDDAFMEAGRSLAAAIPGLDLVHADEGEPP"
     gene            612..1274
                     /locus_tag="VNY79_10905"
     CDS             612..1274
                     /locus_tag="VNY79_10905"
                     /inference="COORDINATES: protein motif:HMM:TIGR04025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HWX73002.1"
                     /translation="MDDRTSGPAAVAAVGDATVDDEAGLRGLYKQPMGLAVLKQLDRL
                     DAHCRNFLAHSPFVVIGSTRPGRGTDVSPRGDAPGFARVLDDHTIVIPDRPGNNRLDT
                     LSNIVTDAEVGLLFFIPGIDETLRVNGVAKLSRDPDLLAAAAVEGREPRLVILVTVRE
                     AFLHCGKALKRSRLWHDDYRVDKKSFPSLGRMIVEQTKPKDVTVEQAETFIAENYVTG
                     LY"
     gene            1461..3587
                     /locus_tag="VNY79_10910"
     CDS             1461..3587
                     /locus_tag="VNY79_10910"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009678 - diphosphate hydrolysis-driven
                     proton transmembrane transporter activity [Evidence IEA];
                     GO_process: GO:1902600 - proton transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-translocating pyrophosphatase"
                     /protein_id="HWX73003.1"
                     /translation="MTTLWLIILCGVLALAYAIWATFSVMQADPGSQRMQEIAAAVRE
                     GAQAYLRRQYATIGVVGIVIFLIVGYFLGWLVGIGFAVGAILSGAAGFIGMNVSVRAN
                     VRTAQAAIGSLAGGLELAFRAGAITGLLVAGLALLGVTIYFAVLTHGLGLAPNDRTVV
                     DSMVALGFGASLISIFARLGGGIFTKGADVGGDLVGKVEAGIPEDDPRNPATIADNVG
                     DNVGDCAGMAADLFETYAVTTVATMVLAAIFFAPVGTDAVARMMTYPLAIGGVCIIAS
                     IIGTFFVRLGTNQSIMGALYKGMIATAILSLVGIAFVTYYLIGFDKLDGVDFSGARLF
                     YCGVAGLVVTALLIVITEYYTGTDYRPVHSIALASVTGHGTNVIQGLAISLESTALPA
                     LVIIAGILFTYNVAGLFGIAIAVTTMLALAGIVVALDAFGPVTDNAGGIAEMAGLPKE
                     VRKSTDALDAVGNTTKAVTKGYAIGSAGLGALVLFAAYNQDLNYFISQADKHPYFQGV
                     SLDFSLSNPYVVAGLLFGGMLPYLFAAMGMTAVGRAASSIVEEVRRQFRERPGIMQGK
                     DKPDYGRAVDMLTRAAIKEMIVPSLLPVLSPIVGYFIIYFIAGGGPQGKSAAFSALGA
                     MLLGVIVTGLFVAISMTSGGGAWDNAKKYIEDGHYGGKGSDAHKAAVTGDTVGDPYKD
                     TAGPAVNPMIKITNIVALLLLAVLAH"
BASE COUNT          589 a         1283 c         1202 g          741 t
ORIGIN      
        1 aggaggctcg ccctcgtcgg catgaacgag atcaagcccg ggtatcgccg ccgccaatga
       61 cctgcccgct tccatgaacg cgtcgtcgac ggtgagcagg cgggcgccgc aatcctcgag
      121 cgcatcgcgg ttctcggcga ccctccagcg gacgttcaac ggcacgataa tggcggcggc
      181 ccaggccacg gcaagataaa gttccagata gcgcgtgctg ttcaacatca acaccgcgac
      241 ccggtcgccc ttcgccacgc cgttctgccg gagcgcgccc gcgaggcggc tcacccgctc
      301 accaagctcg gcccatgtga gcttccgctc gccctcgaga atggcgatgc ccagcggatt
      361 gagctgaagc gcccgccgca ggccatgcgt gacgttcatg ctttcctcct ctcggcgcaa
      421 tgagcgttgg ctgttgttgc cgttggcgaa tttcacgctg ctcgccggcg ccgatggcag
      481 cgcacataca cccgctattt tgctgttccg cactataggg tgcgtactct cagcgcggaa
      541 gggcgcgctt gcgttccgct tccccggcct ttagctaggc attgtcgctt ttctcgaccg
      601 cggagagtga gatggatgat cgaacctcgg gtcccgctgc ggtggctgca gtgggcgacg
      661 caacggtgga cgacgaagcc gggttgcgcg ggctctacaa gcagccgatg gggcttgcgg
      721 tcctcaagca gctcgatcgg ctcgacgcgc attgccgcaa tttcctcgcg cattcgccat
      781 tcgtggtcat cggctcgacg cggcccgggc gcggcaccga tgtgagcccg cgcggcgacg
      841 cgccgggctt tgcccgggtg ctggacgacc acaccatcgt tatccccgac cggcccggca
      901 acaaccggct cgatacgctg tcgaacatcg tcacggatgc cgaggtcggt ctgctgttct
      961 tcattcccgg catcgacgag acgctgcgcg tcaatggcgt cgccaagttg tcgcgcgacc
     1021 ccgaccttct ggccgccgct gcggtcgagg gccgcgagcc gcgcctcgtc attctcgtca
     1081 cggtacgcga ggccttcctg cattgcggca aggccctgaa gcgctcgcgc ctgtggcacg
     1141 acgattaccg cgtcgacaag aagtcgttcc cctcgctcgg gcgaatgatc gtcgagcaga
     1201 ccaagccgaa ggacgtgacc gtcgaacagg cggaaacctt tatcgccgag aactacgtga
     1261 ccggcctcta ttaggggtta ggggacggtc aaaaagcatc gttcggcggc gttgtcgtga
     1321 aacggtcgca gccgttgcac gttgcggtca tttttggcaa tgtccgcgcc gatttgtgcc
     1381 ggacgcgcgg ttgcattcgc gcgcggcgct ctccttccgg gccgggttga cctctggccc
     1441 ccatcagccg gggttcttcc atgacgactt tgtggctcat cattctctgc ggcgtactgg
     1501 ctctggctta cgccatatgg gccacgttct cggtgatgca ggccgatccc ggcagccaac
     1561 gcatgcagga aatagctgcg gcggtacgcg agggcgcgca ggcctatcta cggcgccagt
     1621 acgcgacgat cggcgtcgtc ggcatcgtga tcttcctcat cgtcggctat ttcctcggct
     1681 ggctggtggg aattggcttt gccgttggcg ccattctgtc gggcgcagcc gggttcatcg
     1741 gcatgaacgt ttccgtgcgc gccaacgtgc gcaccgcgca ggcggcgatc ggctcgctgg
     1801 cgggcggcct cgaactcgcg ttccgcgccg gagcgatcac cgggctcctc gtggccgggc
     1861 tcgctctcct cggggtgacc atctatttcg ccgtcctcac ccacggcctc ggtctcgcgc
     1921 cgaacgaccg caccgtggtc gattccatgg tggcgctcgg cttcggcgcc tcgctgatct
     1981 cgatcttcgc gcggctcggc ggcggcatct ttaccaaggg cgccgacgtc ggcggcgatc
     2041 tggtcggcaa ggtggaggcc ggcatccccg aggacgatcc gcgcaatccc gccaccattg
     2101 ccgacaatgt cggcgacaat gtcggcgact gcgccggcat ggcggccgac ctgttcgaga
     2161 cctacgcggt gacgacggtc gccaccatgg tgctggctgc gatcttcttc gctccggtcg
     2221 gcacagatgc agtcgcgcgg atgatgacct acccgctggc gatcggcggc gtctgcatca
     2281 tcgcctcgat catcggcacg ttcttcgtgc ggctcggcac caatcagtcg atcatgggcg
     2341 ccctctacaa gggcatgatc gccaccgcga tcctctcgct ggtcggcatc gctttcgtga
     2401 cctactacct gatcggcttc gataagctcg acggcgtgga tttctccggc gcgcggctgt
     2461 tctattgcgg cgtcgccggc ctcgtcgtaa cggcgctcct catcgtcatc accgagtact
     2521 acactggcac cgactatcgc ccggtgcact cgatcgccct ggcctcggtc accggccatg
     2581 gcaccaacgt gattcagggg ctggcgattt cgctggagtc gacggcgctt ccggcgctcg
     2641 tcatcatcgc cggcatcctg ttcacctata atgtcgccgg cctgttcggg atcgccatcg
     2701 cggtgacgac gatgctcgcc cttgccggca tcgttgtcgc cctcgacgcc ttcggcccgg
     2761 tcaccgacaa tgccggcggc atcgccgaaa tggccggtct gccgaaagag gtgcgcaaat
     2821 cgaccgacgc gctcgacgcc gtcggcaaca ccaccaaggc ggtgaccaag ggctatgcca
     2881 tcggctcggc cggcctcggc gcactggtgc tgttcgcggc ttacaaccag gacctcaact
     2941 atttcatttc ccaagccgac aagcatccct acttccaggg cgtttcgctc gacttctcgc
     3001 tgagcaaccc ctacgtcgtc gccggtctgc tgttcggcgg gatgctgccg tatctcttcg
     3061 ccgcgatggg catgaccgcg gtgggccgtg cggcctcctc gatcgttgag gaggtgcggc
     3121 ggcaattccg cgaacggccc ggcatcatgc agggcaagga caagcccgac tacggccgcg
     3181 ccgtcgacat gctcacgcgc gctgcgatca aggagatgat cgtgccgtcg ctgttgccgg
     3241 tgctttcgcc aatcgtcggc tatttcatca tctacttcat cgccggcggc ggcccgcagg
     3301 gcaaatccgc cgcattctcc gcgctcggtg ccatgctgct cggcgtcatc gtaaccggtc
     3361 tgttcgtcgc catctcgatg acctcgggcg gcggcgcctg ggacaacgcc aagaagtaca
     3421 tcgaggacgg ccattacggc ggcaagggct cggacgcgca caaggccgcg gtcaccggcg
     3481 atacggtcgg cgacccctac aaggatacgg cgggaccggc ggtcaatccg atgatcaaga
     3541 tcaccaacat cgtggcgctg ctgctgctcg cggtgctggc gcactgaggc agtagtggtc
     3601 cgagtctaac attcgcatcc cggctgcgcg ggtagcgaat atcaaatcgg ctctaccagc
     3661 ctcacatccc cgggatgccc atgcggctgt tttcgagggt gtgcatgagg ccgctgatga
     3721 tgttgtagtc ggttccggcc gtcggcgtgg tgcggctgat gaaatcaaag acgcggccgt
     3781 ccttgatgcc gtaggccgcg acgcgctgca cgcgc
//
LOCUS       DATMQB010000382         3374 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2332340, whole genome shotgun sequence.
ACCESSION   DATMQB010000382 DATMQB010000000
VERSION     DATMQB010000382.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3374)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3374)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3374
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2332340"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(106..1356)
                     /locus_tag="VNY79_10915"
     CDS             complement(106..1356)
                     /locus_tag="VNY79_10915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX73004.1"
                     /translation="MSQFDTSLRRRTLLKAGIALGASQVIGAPFIIASRGEEPVKIGM
                     VNPLTGVLSALAQSEVDGAKYAEAEINKKGGILGRQVQLLVEDSANDVGTGVQKTRKL
                     IDRDQVAVILGDVNSGIAYAMSQVTFEKKVFHIVPGGHTDPITGTNCKWNVFRVCNTT
                     TMDTAAITPELVKRFGKKWFFITPDYAYGHSLQDAFIKALTKLGGTYDGDYLPINNTD
                     FSATLIKAKAYKPNVLLNNMGGLTQINCMKQLTQFGLQKEMALGGALFELESVKAVSS
                     DAQAGWWDMEWWWNQPNVPEVVKFVADYRAAMKKTPSARDWFGYVSMHSVRLAAAKAK
                     SLDGPKLAKALEDLELPPDVALQPGKVRYRAGDHELMPNIFVGQAHPPKSGPEDVFTV
                     EALVPGEQAAGTVAETGCKMEQPA"
     gene            1609..2286
                     /locus_tag="VNY79_10920"
     CDS             1609..2286
                     /locus_tag="VNY79_10920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016657 - obsolete oxidoreductase
                     activity, acting on NAD(P)H, nitrogenous group as acceptor
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase"
                     /protein_id="HWX73005.1"
                     /translation="MDVFEAVDSRIACRAFLDTPVDAEIVRDLIARAARAASGGNLQS
                     WQVYALAGAPLAALKQKVVAHIAGRDPRHDDAEYPIYPKTLWEPYKSRREEHGVQLYG
                     ALGVARDDIAGRLAHYKRNFEFFNAPVALFIAIDRKLGPGQWADLGGYIHALAFLARG
                     YGLDSCPQESWARMHRIVGEFVAMPPEQMLFCAVAIGYGDHAHPANSFRSPRAELAEY
                     CRFFGFD"
     gene            complement(2488..2856)
                     /locus_tag="VNY79_10925"
     CDS             complement(2488..2856)
                     /locus_tag="VNY79_10925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73006.1"
                     /translation="MKEPERKNDQNFAVLSAMLNAGLKPKPKLSAIEYARRLALEKAA
                     QLRRYCDAFALWRTCRRKTCRRQRRCCGEAAGCLRRALDRVPHPAQWRARQDILEATP
                     RNIGAPERAARQCMPRDLYE"
BASE COUNT          514 a         1111 c         1088 g          661 t
ORIGIN      
        1 attgcgagcg aagcgaagca atccagtcgc ccggtaaagc gctggattgc ttcgtcgcaa
       61 gctcctcgca gtgacgtgtg agtgaatacc gccgcggggt gcaggtcagg ccggctgctc
      121 catcttgcat ccggtctcgg cgaccgtgcc ggcggcctgc tcgccgggca ccagcgcctc
      181 gacggtgaag acgtcctcgg ggccggattt cggcgggtgg gcctggccga cgaagatgtt
      241 cggcatcaat tcgtgatcgc cggcgcggta gcgcaccttg ccgggctgca gcgccacgtc
      301 gggcggcagc tcgaggtctt cgagggcttt cgccagcttc ggcccatcga gcgatttcgc
      361 cttggcggcg gcgagccgca ccgaatgcat cgacacatag ccgaaccagt cgcgcgccga
      421 cggcgtcttc ttcatcgcgg cgcgatagtc ggcgacgaac ttcaccacct cgggcacgtt
      481 cggctggttc caccaccact ccatgtccca ccagccggct tgcgcatccg acgacaccgc
      541 cttgacgctc tccagctcga acagcgcgcc gccgagcgcc atttccttct gcaggccgaa
      601 ctgggtgagt tgcttcatgc agttgatctg ggtgagcccg cccatattgt tgagcagcac
      661 gttcggcttg taggccttgg ccttgatcag ggtggcggag aagtcggtgt tgttgatcgg
      721 caggtagtcg ccgtcgtaag tgccgccgag cttggtcagc gccttgatga aggcgtcctg
      781 cagcgagtgg ccgtaggcgt aatccggcgt gatgaagaac catttcttgc cgaaccgctt
      841 gaccagttcg ggcgtgatgg cggcggtgtc catggtcgtg gtgttgcaga cccggaacac
      901 gttccatttg caattggtgc cggtgatcgg atcggtgtgg ccgccgggca cgatgtggaa
      961 cactttcttc tcgaacgtca cctgcgacat ggcgtaggcg atgccggaat tgacgtcgcc
     1021 gaggatgacg gcgacctgat cgcggtcgat cagcttgcgc gtcttctgca cgccggtgcc
     1081 gacgtcgttg gcggaatcct cgaccagaag ctggacctgg cggcccagaa taccgccctt
     1141 cttgttgatc tcggcctcgg catatttggc gccgtcgacc tcgctctgcg ccagcgccga
     1201 aagcacgccg gtcagcgggt tgaccatgcc gatcttgacc ggctcctcgc cgcgcgaggc
     1261 gatgatgaac ggcgcgccga tgacctggct ggcgccgagc gcgatgccgg ccttgagcaa
     1321 cgtgcggcgg cgcagcgacg tgtcgaattg tgacattctg ttctccctga tgtcggtgtc
     1381 tcgtctcgtc ttgttttgtc ttgttttgtc ttgttttatt cttgcgccgg ggttcgccct
     1441 gcccaggccg gcaaacatct tctactgcgc tgtcggggcg gtcaaggcaa tgcggccgct
     1501 tgccggatgc gacttatgtc gcatcgccgc gagcgcacgg cattcgcctt tgcgggccga
     1561 tggtatatga cctgcacggc aattcgcccg ccccggatgg tcatacccat ggacgttttc
     1621 gaagccgtcg attcgcgcat cgcctgccgc gcctttctcg acacgccggt cgatgccgag
     1681 atcgtccgcg atctcatcgc gcgggccgcc cgcgccgcct ccggcggcaa tctgcaatcg
     1741 tggcaggtct atgcgctcgc cggcgcgccg ctcgccgcgc tcaagcaaaa ggtcgtagcc
     1801 cacatcgccg gccgcgatcc gcgccacgac gacgccgaat atccgatcta cccgaagacc
     1861 ctgtgggagc cgtacaagtc gcggcgcgag gagcacggcg tgcagctcta cggcgcgctc
     1921 ggcgtggcgc gcgacgacat cgccgggcgg cttgcgcatt acaagcgcaa tttcgagttc
     1981 ttcaacgcgc cggtcgcgct gttcatcgcc atcgacagga agctcggccc cggccaatgg
     2041 gccgatctcg gcggctatat ccacgcgctg gcgttcctcg cccgcggcta tgggctggac
     2101 agctgcccgc aggaatcctg ggcccgcatg caccgcatcg tcggcgagtt cgtcgccatg
     2161 ccgccggagc agatgctgtt ctgcgcggtc gcgatcggct atggcgacca cgctcacccg
     2221 gccaacagct tccgctcgcc gcgcgccgag ctcgcggagt actgtcgatt ttttggtttt
     2281 gactgagccg ctcgcgcctc cctctccccg cgtgcgggga gagggttggg gtgagggggc
     2341 ctttccgctt ggctcagaat tgcggacatg tctcaagctc agtcttttca tccgcggtgc
     2401 tcagaatcgc ggagaggccc cctcaccctc ggtcgcttcg ctccctcgac ctctccccgc
     2461 gcagcgggga gaggtgacga gcagtcgcta ctcatacaaa tcgcgcggca tgcattgccg
     2521 cgccgcgcgc tccggcgcgc cgatattgcg cggcgtagcc tcgagaatgt cctgccgcgc
     2581 gcgccactgc gccggatgcg gcacgcgatc gagcgcgcgg cgcaggcagc cggccgcttc
     2641 gccgcagcag cggcgctgcc gacggcacgt cttgcgccgg caggtgcgcc acaaggcgaa
     2701 cgcgtcgcaa tagcggcgca gctgcgccgc cttctcgagc gcgaggcgcc gggcgtactc
     2761 gatcgcgcta agcttcggct tcggtttcag gcccgcgttg agcatggcgg acagtacggc
     2821 gaagttttgg tcgttctttc gttcgggctc tttcacggcc agactctccc gtctcgcggc
     2881 gcgtttttgc ggccgcgttt tatcgtgcgc gcgatcgcag atggatcgcg cgcgagcaaa
     2941 ttacggtcac gtgaagcgcg aaaccggtcc ggtccaagga aagggcaggg gtggggcctg
     3001 actttacttt cttccgttat tccagtttcg ccatgtagcc cggattgagc gcagcgaaat
     3061 ccgggaacga aggttcggct cgactgccgc tcccgggttt cgctctgctc aacccgggct
     3121 acgaagaaga aaagaaggaa gcggaacgcc ggcaaacgca gggtaaccac cgccgcatct
     3181 cgcgatgcgg cgcgcgccct ttcggagcgc gcacgcttga cggcgttcca ccacggctct
     3241 cacctaaggg agttatttca tcccaaaggc tcagcttcag gccaggcttc ctgggacgcg
     3301 gtctgcacgg gcgttacccg ccttcgcctg tcccagtcca gggaagcacc tcccgtcccg
     3361 gtcataatgc cggg
//
LOCUS       DATMQB010000383         6425 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1420362, whole genome shotgun sequence.
ACCESSION   DATMQB010000383 DATMQB010000000
VERSION     DATMQB010000383.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6425)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6425)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6425
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1420362"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1545)
                     /gene="murJ"
                     /locus_tag="VNY79_10930"
     CDS             complement(<1..1545)
                     /gene="murJ"
                     /locus_tag="VNY79_10930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011471903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0034204 - lipid translocation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="murein biosynthesis integral membrane protein
                     MurJ"
                     /protein_id="HWX73007.1"
                     /translation="MIERILTVGGFTLVSRVTGFARDIMLAAILGAGPVADAFFVAFR
                     LPNHFRAIFAEGAFNAAFIPAYARIRTQGGLEAAKLFGDRIFTLLLATQILLLALALL
                     FTPQAIDLLAPGFSREPQQFALAVSLTRITFPYLLLITLVTLWGGILNALHRFAAAAA
                     APILLNLSMMATLALAPMFGGAAHAAAWGVLISGVLQAALVGGDAWRAGFMTSFHALR
                     WDDDVRRFFKALVPATIGSAGTQLALFADTIIASFLSAGALSALYYADRIDQLPIGVI
                     GIAVGTVLVPEMTSRVAAGDEAGARAAQSRAIEFALLLALPCVVAFLVLPDLIMRGLF
                     MRGRFMADDAHAAAMTLVAYTIGLIPFILVRSVVAPFLARGDTATPVKAALTGTAVNI
                     VCKIALMGSLAQIGLALATSIGAWINFVLVLWFARREGLFGFDAALRSSLGKLAIANG
                     AFAIFLLVAAPVVTALLPSWPSFRDSSELIALAVLGGLFYGALVAVLFGRQWLSRLRL
                     RAAKAPA"
     gene            complement(1591..2745)
                     /locus_tag="VNY79_10935"
     CDS             complement(1591..2745)
                     /locus_tag="VNY79_10935"
                     /EC_number="2.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014493917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008483 - transaminase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DegT/DnrJ/EryC1/StrS family aminotransferase"
                     /protein_id="HWX73008.1"
                     /translation="MNQHARLEDKAIPFIDVAAQRRRLGRAIDDAIARVLAHCQFVQG
                     PEVRALEAELAAFCGARHAIGCSNGTDALRLVLMAWGIGPGDAVICPAFTFCATAEVV
                     ALCGATPVMADVEPETFNLDPASCDRAVATATRLGLKPRVIIPVDLFGLPADHDAIAA
                     VAAAHGMLVLDDAAQAFGASYKGRRLGVLAPATATSFFPAKPLGCYGDGGAIFTDDDA
                     LAARLKSLRVHGEGGDKYDAEHIGLTGRLDTMQAAIVLEKLKIFPEEIAARNAAAARY
                     AAGLAGVAMLPQVAPTMTSVWAQYTIRLAPGRREALAAALKAQGIPTAIYYAKPLHRQ
                     AAYRHFPVADGGVPVSERLAEEVISLPMHAYLEEPVQDRIIAAVRRALAG"
     gene            complement(2787..3785)
                     /locus_tag="VNY79_10940"
     CDS             complement(2787..3785)
                     /locus_tag="VNY79_10940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HWX73009.1"
                     /translation="MGEAGIGADGALKIGVVGVGVMGSNHARVLSEMSNVRLVGIADP
                     DRKQRDFVARTLGCAAFGDLDSLLNCGLDAVTIAAPTHLHHDLALECIARGVHLLVEK
                     PIAPTVEEGRAIVAAARHAGVTLMVGHVERFNPAVESIKRAIKNEDILSIAITRVGPF
                     PPRMSNVGVVIDLAVHDIDLIRWFTDSEIVEIQPQLSSAIAEREDIALLQFRTASGVL
                     AHINTNWLTPFKARTIHVATRNKYLIGDLLTLQVTECFGFQPDGSYSMRHLSVGYAEP
                     LRSELLAFVTAIRSGRTPAVTGEEGVASLEVAIRCLDARAASSTVPQRKGPRRVAG"
     gene            4070..5059
                     /locus_tag="VNY79_10945"
     CDS             4070..5059
                     /locus_tag="VNY79_10945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010685481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HWX73010.1"
                     /translation="MLCLGVASAAAGPAPAADDEPAYGPRLEGFEYPRPVAHFSFTSQ
                     GEAVEMAYMDVQPPAPNGRAVVLLHGKNFCATTWEDTITVLAEAGFRVIAPDQIGFCK
                     STKPAHHQYTFQELAGNTRALLASLAITRVTVIGHSTGGMLGTRYALMFPEEVEKLVL
                     VDPIGLEDWKAKGVPWQSVDALYRQDLKTNAGGIRDYERATYYAGTWAPQYERWVQML
                     AGMYRGPGRDIVAWNSALLCDMIYTQPVFYEFEKIAVPVLLLIGDKDTTALGKNLAPP
                     AVRAALGNYPVLGKAAAARIPHALLVEFADLGHSPQIQAPEVFHKALLDGLRR"
     gene            complement(5159..>6425)
                     /locus_tag="VNY79_10950"
     CDS             complement(5159..>6425)
                     /locus_tag="VNY79_10950"
                     /inference="COORDINATES: protein motif:HMM:NF024895.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HWX73011.1"
                     /translation="RGRVGYAFDHVLVYGTGGFAWERSSTSTIATCVTVSGSCPGHGV
                     KFTDGSSEASATLSGWAAGVGIEWALTPQWILRAEYLHLAFDRGAENFTASGTASRVP
                     FAVSGRNSMSNDVDFARLGLSYLFNPDNPIDWGSGSSGTRTPAAASTAFGSNANAAAD
                     FLADWQALVARVRANQPNWATPLITTTGLLLHRYRFDLAEQHVGNGNQTTIIDGGKGV
                     DLIVSDRTEIQIAMPPYDIRNTPTGQGVFSGFADWGFVRVKQQLASSPSSADDYLVSV
                     MLQAQAPTGTPQLTSDAWTFLPTLAFGKGWGDFNVQASVTGVLPASNVSTLGDQIQTN
                     VAFQYRVMKVLSPELEVSWTYWIGGQRDGLNQVYLTPNIIIGRLPLADNLSLTAGFGY
                     QFAVAPSYRPNPLTPSYGNAWVFTTRINF"
BASE COUNT         1197 a         2071 c         2130 g         1027 t
ORIGIN      
        1 cgcgggcgcc ttggccgcgc gcaggcgcag gcgcgaaagc cattgccgcc cgaacaacac
       61 cgcgaccagc gctccataga acaggccgcc gagaaccgcc agcgcgatga gttcagacga
      121 atcgcggaag ctaggccacg atggtaacaa cgcggtgacg acgggggccg cgaccagcag
      181 gaagatcgcg aaggcgccat tggcgatcgc gagcttgccg agcgaggacc gcaatgccgc
      241 gtcgaagccg aagagccctt cgcgacgggc gaaccagagc acgagcacga aattgatcca
      301 ggcgccgatc gaggtcgcca gcgccagccc gatctgcgcc aacgaaccca tcagcgcgat
      361 cttgcacacg atgttgacgg cggtgccggt cagcgccgcc ttgaccggcg tcgcggtgtc
      421 cccgcgcgcg aggaacggag cgacgacgct gcgcaccagg atgaagggga tgaggccgat
      481 cgtgtaggcg accagcgtca tcgccgcggc gtgcgcgtca tccgccatga aacggccgcg
      541 catgaacaga ccgcgcatga tgaggtcggg cagcaccagg aaggcgacga cgcagggaag
      601 cgcgaggagc agggcgaatt cgatggcccg gctttgtgcc gcgcgcgcgc ccgcttcgtc
      661 gcccgccgcg acgcggctcg tcatctccgg caccagcacg gtgcccaccg caatgccgat
      721 cacgccgatc ggcagctggt cgatgcggtc ggcgtagtag agcgcggaga gcgcgccggc
      781 cgacaggaag ctcgcaatga tggtgtcggc aaagagcgcg agctgagtgc cggccgagcc
      841 gatcgtcgcc ggcaccagcg ccttgaagaa ccggcgcacg tcgtcgtccc agcgcagggc
      901 gtggaaggag gtcatgaagc ccgcgcgcca ggcatcgccg ccgaccagcg ccgcttgcag
      961 cacgccggat atcagcacgc cccaggccgc cgcgtgggcg gcgccgccga acatcggggc
     1021 cagcgccagt gtcgccatca tcgacaggtt gagcaggatc ggcgccgccg cagccgccgc
     1081 gaagcgatgc agggcgttga gaatgccgcc ccacagcgtc accagggtga tgagcagcag
     1141 gtaggggaag gtgatgcggg tcaggctgac cgcgagcgcg aactgctgcg gctcgcgcga
     1201 gaagcccggc gccagcagat cgatcgcctg cggcgtgaac aagagcgcga gcgccagcag
     1261 aagaatctgc gtcgccagca gcagcgtgaa aatgcggtcg ccgaatagtt tcgccgcttc
     1321 gagcccgccc tgagtgcgaa tgcgcgcgta ggcggggatg aaagcggcat tgaacgcgcc
     1381 ctcggcaaaa atggcgcgga aatggttggg cagccggaag gcgacgaaga aggcgtcggc
     1441 gaccggcccg gcgcccagta tggccgccag catgatgtca cgggcaaagc cggtaacgcg
     1501 cgagacgagc gtaaagccgc cgaccgtgag aattcgctcg atcattgccg ccactatcct
     1561 ccccgcgcgg ggaagacgaa ggtacaagct tcagccggcg agcgctcggc gaacggcggc
     1621 gatgatacgg tcctgcaccg gctcctcgag ataggcgtgc atgggcaggc tgatcacttc
     1681 ctcggccagg cgctcgctca ccggcacgcc gccgtcggcc accgggaagt gccgataggc
     1741 cgcctgccgg tgcaacggct tggcgtagta gatcgccgtc ggaatgccct gggccttgag
     1801 cgcggccgcg agcgcttcgc gccgtccggg agcgagccgg atcgtgtatt gcgcccaaac
     1861 cgaggtcatc gtcggggcga cctgcggcag catcgcgacg ccggcgagcc cggcagcgta
     1921 gcgcgccgcc gccgcattgc gcgcggcgat ttcctcggga aagatcttga gcttctccag
     1981 aacaatcgcg gcctgcatcg tgtcgagccg gccggtgagg ccgatgtgtt cggcgtcgta
     2041 tttgtcgccg ccctccccgt gcacgcgcag acttttgagc cgggcggcga gcgcatcgtc
     2101 atcggtgaag atcgcgccgc cgtcgccgta gcagccgagc ggcttggccg ggaagaaact
     2161 ggtcgccgtc gccggcgcga gtacgccgag cctgcggccc ttgtagctcg cgccgaacgc
     2221 ctgcgcggcg tcgtcaagaa cgagcatgcc gtgcgccgcg gcgacggcgg cgatggcatc
     2281 gtgatccgcg gggaggccga aaaggtcgac cggaatgatt acccgcggct tgagcccaag
     2341 ccgcgttgcg gtcgccacag cgcggtcaca gcttgccgga tcgagattga acgtttccgg
     2401 ctcgacatcg gccatcaccg gcgtcgcgcc gcacagcgcc accacctccg ccgtcgcgca
     2461 gaaggtgaag gcggggcaga tcacggcgtc acccggtccg atcccccatg ccatgagcac
     2521 gaggcgcaac gcatccgtcc cgttcgagca accgatcgcg tgccgcgccc cgcagaatgc
     2581 cgccagctcg gcctcgagcg cacgcacttc cggaccttgg acgaactggc aatgcgcaag
     2641 gacgcgcgcg atggcgtcgt cgatggcgcg gccgaggcgg cgccgctggg cggcgacgtc
     2701 gatgaacggg atcgccttgt cctcaaggcg cgcgtgctga ttcatgacct agtcctgttc
     2761 gatccacgcg cgaaaagggg gcccgctcag ccggccacgc gccgcggccc cttgcgctgc
     2821 ggcacggtcg acgacgccgc tcgcgcgtcg aggcagcgga tggcgacttc gaggctcgcc
     2881 acaccctctt cgccggtcac tgcgggggtg cggccgctgc ggatggcagt gacgaaggcg
     2941 agcaactccg agcgcagcgg ctcggcgtag ccgaccgaca aatggcgcat cgaatagctg
     3001 ccgtccggct gaaagccgaa acattcggtg acctgcagcg tcagcagatc gccgatcaga
     3061 tatttgttgc gcgtcgcgac atggatggtg cgcgccttga acggcgtcag ccagttggtg
     3121 ttgatgtggg cgagcacgcc tgaggcggtg cggaactgca acagcgcaat gtcctcgcgt
     3181 tcggcgatcg cgctcgacaa ttgcggttgg atttcgacga tctccgaatc cgtgaaccag
     3241 cggatcaggt caatgtcgtg caccgcgaga tcgatgacca cgccgacgtt cgacatgcgc
     3301 ggcggaaacg gaccgaccct ggtgatggcg atcgagagga tgtcttcgtt cttgatcgcg
     3361 cgcttgatcg attcgaccgc cggattgaag cgctcgacgt ggccgaccat cagcgtgacg
     3421 ccggcgtggc gggcggcggc gacgatcgcg cggccttcct ccaccgtcgg cgcgatcggc
     3481 ttctcgacca ggagatgcac gccgcgcgct atgcattcaa gcgcgaggtc gtgatgcagg
     3541 tgggtcggcg ccgcgatggt gacggcatcg agcccgcagt tgagcagtga atcgagatcg
     3601 ccgaacgccg cgcagccgag cgtgcgagcc acgaaatcgc gctgcttgcg atcggggtcc
     3661 gctattccca ccaggcggac attggacatt tccgacagga cgcgcgcatg gttgctgccc
     3721 atgacgccga cgcccaccac cccgatcttc aacgcaccgt ccgcgccgat tcccgcctca
     3781 cccatgaccc caagggctcc ctcagtgacc gccccgccct cccctagcac ggctcgcggc
     3841 gactggcgac acaatccgcg cgaaaccccg acacgttttg cttcaatggc ttacggccgt
     3901 cggtgccgcc gaaattcctt gttctgagcc aacttactcg gaatctttcg tccgctcggg
     3961 tgccagcaca aatcctcgag ctcctcgaac gctgacattt tcagaatctg gccggggaaa
     4021 ttcgatcatc ggaaggtggg tgatgcgctg ctctgcactt cttctgtccg tgctttgcct
     4081 cggtgtcgcg tcggcggcgg cggggcctgc gcccgcagcc gacgacgagc cggcttacgg
     4141 tccgcgactt gaagggttcg aatatccgcg gccggtagcg catttctcct tcacctcgca
     4201 gggcgaggcc gtggagatgg cgtacatgga cgtgcaaccg ccggcgccga acggccgcgc
     4261 cgtcgtgctc ctgcacggca agaatttctg cgcgacgacc tgggaggaca ccatcacggt
     4321 cctcgccgaa gcgggctttc gcgtcattgc tcccgaccag atcgggtttt gcaaatcgac
     4381 gaaacccgcg caccaccagt acaccttcca ggagcttgcc ggaaacacgc gcgcgctgct
     4441 ggcttcgctc gcaataacgc gggtgacggt catcggccat tcgaccggcg gcatgctcgg
     4501 cacccgctac gcgctgatgt ttccggaaga ggtggaaaag ctggtactgg tcgatccgat
     4561 cgggctcgag gactggaagg cgaagggcgt gccgtggcaa agcgtcgatg cgttgtaccg
     4621 gcaggacctc aagaccaacg ccggcggcat ccgcgactat gagcgcgcaa cctattacgc
     4681 cgggacgtgg gcgccgcaat acgaacgctg ggtgcagatg ctggcgggca tgtatcgcgg
     4741 ccccggccgc gacatcgtcg cctggaattc ggcgctcctc tgcgacatga tctatacgca
     4801 gccggtcttc tacgagttcg agaagatcgc agtgccggtg ctgctgctga tcggcgacaa
     4861 ggacacaacg gcactcggca agaaccttgc tccgcccgcc gtgcgcgccg cgctcggcaa
     4921 ctacccggta ctgggaaagg cggcggcggc gcgcatcccg cacgcgctgc tggtcgagtt
     4981 tgccgatctc ggacactccc cgcagatcca ggcgcccgag gtttttcaca aggccctgct
     5041 cgacggcctg cgccggtagg cggcggccgc caagtcagac cgcgcgggga ggccccgctt
     5101 tccggccgac cggagatgat ctacgggcga cttttgtgtc tcgtaaaata gtgaatgctt
     5161 agaagttgat acgcgtggtg aatacccagg cattgccata ggagggagtc aaagggttcg
     5221 ggcggtagct aggcgctaca gcaaattgat aaccgaatcc ggccgtcaaa cttagattgt
     5281 cggccagcgg aagacggccg attattatgt ttggcgtaag gtagacttgg ttcaatccgt
     5341 cgcgctgacc tcctatccag taggtccaac taacctcaag ctcgggcgaa agaactttca
     5401 tcacgcggta ttggaatgca acgttcgttt gaatttgatc gcccagggtg ctgacgttcg
     5461 acgccggcaa tacgccggtt accgacgctt ggacgttgaa gtcgccccag cctttgccga
     5521 aagcgagcgt cggcaagaag gtccaggcat cgctggtcaa ctggggagtg ccggtcggcg
     5581 cctgcgcctg cagcatcacg ctgacgaggt agtcgtccgc gctcgatgga ctgctggcaa
     5641 gttgctgctt gacgcgaaca aatccccaat ccgcgaagcc gctgaacact ccctgccccg
     5701 tcggcgtgtt gcggatgtcg tatggcggca tggcaatctg aatctcagta cggtcgctca
     5761 caataaggtc gacgcctttg ccgccatcga tgatggtggt ctgattgccg ttgccgacat
     5821 gctgttcggc cagatcgaag cgatagcggt gcaacagcaa gcctgtcgtc gtgatcaatg
     5881 gggtagccca gttcggctgg ttggcgcgca ctcgtgctac cagcgcctgc caatcggcaa
     5941 gaaaatccgc tgccgcattt gcatttgagc cgaacgccgt agatgcagcc gcgggcgttc
     6001 gcgttcctga actgccggac ccccaatcaa tgggattgtc gggattgaac agatagctta
     6061 atccgaggcg ggcgaaatcg acgtcgttgc tcattgaatt tcgaccgcta accgcaaatg
     6121 gcacgcgaga cgcggtaccg gaggcggtga agttctccgc tccccggtca aacgccaggt
     6181 gcaaatattc ggcgcgaagt atccattgtg gggtgagcgc ccactcgata cctactcccg
     6241 ccgcccaacc actgagcgtg gcagacgcct cggaagagcc gtcggtgaat ttcacgccat
     6301 ggcctgggca cgagcctgaa acggtgacac aggtggcaat cgtcgatgtg gaacttcttt
     6361 cccaggcgaa tccgcctgta ccgtacacaa gcacgtggtc gaacgcataa ccgacgcggc
     6421 cgcgc
//
LOCUS       DATMQB010000384         7777 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2651222, whole genome shotgun sequence.
ACCESSION   DATMQB010000384 DATMQB010000000
VERSION     DATMQB010000384.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7777)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7777)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7777
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2651222"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..539
                     /locus_tag="VNY79_10955"
     CDS             <1..539
                     /locus_tag="VNY79_10955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HWX73012.1"
                     /translation="GDNVINALAGVGLECDDVDVVVCSHLHPDHCGCNTFFRRATCII
                     HAKEIEAARAPGAEAAGYIAAEWEQPVPPDAIDGERDLFGDGRIVLIPLPGHTPGSTG
                     ALVELEKSGTFLLASDTVSLRSTIDTGIIPRNTWNAEALAKSLAEVRRIEARGAIVLC
                     GHDEAQWQTLRKGADAYE"
     gene            532..2913
                     /locus_tag="VNY79_10960"
     CDS             532..2913
                     /locus_tag="VNY79_10960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012707172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HWX73013.1"
                     /translation="MNDAPEMHARPKIVGARIKRTEDPRLLTGLGAYTDDRQVMRVLH
                     VAFRRSDQAHARIRSIDCSAARAAPGVVAVLTAEDLSAAVQPLVATSRMPNYYPTPLL
                     PLAQHKVRYVGEPVVGVIAQSRYHAEDALELIAIDYEPLAAVSDPEAAARSGAALLHE
                     EAGSNVLVSREFKRGDVDAAAQSAPVRVKGRFRMHRKTALAIEPRACLAEYEAGREAL
                     TLHSATQVPGIVRDALATALDIPGHRIRVVAPDVGGGFGGKGSLYPEEIFVCAAARQL
                     RRAVKWTSDRLEDLAASNQAFDEIVDAELALDADGRILALSADVVGDVGAYSVYPWTA
                     GLEPVQVVSFLPGPYRIQHYRARTRAVATSKAPTGPYRGVGRPISTFVMERLMDMAAA
                     RIGMDAKDIRLKNLVAAEELPYKVASGIVWDKSGFQECLNAACAAIGYDSLRAEQKEA
                     RAAGRWVGIGIACYAELTGIGSRISVAPGMPINTGTETAIVRIDSTGAVTAAFGVAAH
                     GQGLETTLAQVVAEHLGARFDDIRIAQGDSSAVPGGTGTYASRSMVLAGGAGTLAAQA
                     VREKVLHAASHLLEASVADLVAEDGRVTVVGTDRSISFREVARAVYSELARLPAEARG
                     ELAATRTYDPVFGTTSAATHIATVEIDPETYEIRVERFVVAEDCGRLVNPLIVDGQVH
                     GGVAQGIGAALYEEVIYDERGQVTTGSLVDYLVPSACEIPPMLVVHLESESPTTLGGF
                     RGMGEGGTIGAPAAVANAVADALAPLGIEINELPATPERLFRLIEAARARRKP"
     gene            2924..3676
                     /locus_tag="VNY79_10965"
     CDS             2924..3676
                     /locus_tag="VNY79_10965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX73014.1"
                     /translation="MDLGLTGKIAVVTGGTSGVGREIALSLAAEGANVAVNYRSSAKD
                     AEILVDEIVAKGGKAKAYKADVADFAAVKAMVDDIVNDFGGLNILINNAGLAIRQRFL
                     ETKPDDWHRQIDACLYGAIHCCHAAAPHLDAAGNGRIVSVIGDSSRVGESGLAIVAAA
                     RAGVVALMKSLARELGRSGTTANTVSLGLVETPHDKDWVDANRDKLIKLYPLRRLGVP
                     GDVAPMVALLASPHSGWITGQVLSISGGFSMV"
     gene            3690..5234
                     /locus_tag="VNY79_10970"
     CDS             3690..5234
                     /locus_tag="VNY79_10970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HWX73015.1"
                     /translation="MLRTDLIAPIPELLRRNAAARAAKIAYRDAETSVTYADLFERTG
                     RLAGHLADAGIAANDTVAIMLPSSVAWVESCLAIARAGAIGVPISYDSSETEIAYRLA
                     DANCRAVFTTAERGDLLARLQASAPNPGTLIVTDRGACSAPALRYAHLAAAAPQSAPS
                     DPPSLHDTSFILYTSGTTGRAKGVRLTVHGMLWVAAACWAPITGLSEHDTLLSPLPLF
                     HSYALNLSVLGVLATGASACIMEKFSTSEAVRLLKSGQFTYFPGVPTMFHYLLQATRG
                     EPDLRFPNLRLCVSAGAIMPATLNREFEERFGTRLLDGYGITETSTMVTMNWPSGGRI
                     MGSCGIPLPGLAVRIVDASGGDVAPDQEGELIVRGPNVMPGYHNKPEETRSALRAGWY
                     HTGDLAKCDENGFVTITGRLKELIIRGGQNIAPAEIEEVVNSFAAVLDSAVVGIPHEH
                     LGEVPALFVVPRPQQAIDNEALLAHCRQHLSAYKVPHVVRLIAEIPRTGSGKIIRYRL
                     RELIKA"
     gene            5272..6516
                     /locus_tag="VNY79_10975"
     CDS             5272..6516
                     /locus_tag="VNY79_10975"
                     /inference="COORDINATES: protein motif:HMM:NF013847.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin-independent methionine synthase II
                     family protein"
                     /protein_id="HWX73016.1"
                     /translation="MPGKPSRKPDSARKATPKSRRGNAGRILTTHVGSLIRPPKLQEF
                     LKAQRDREPYEQAAFDACLHDAVADVVQKQAEIGLDVINDGEYGKTISWSRYVLERMS
                     GFEQRDRPAHAGMPAAVAGRDRREFAEFYADYDRHQGFTGMTGWALTGPIRYTGHAAI
                     ARDIANFKAAAKGAKTGGLFMAAVAPASVAPDRTDEYYKSDEEYVFAIADALHEEYKA
                     IIDAGLILQVDDAYLALTYEVMVPPKTLKDYRKWATLRIEALNHALRGLPEERTRYHV
                     CWGSWNGPHAFDVELKDIVDLILKVRVGGYLLEMANPRHEHEWRVWERVKLPKGRMLI
                     PGVISHATNVVEHPELVAERLVRLAKLVGRDNLMAGTDCGFAQGPFVQRVHPSIMWAK
                     LRTLVEGARLASKHPGAHRRAA"
     gene            6645..>7777
                     /locus_tag="VNY79_10980"
     CDS             6645..>7777
                     /locus_tag="VNY79_10980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018857407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009190 - cyclic nucleotide biosynthetic
                     process [Evidence IEA];
                     GO_process: GO:0035556 - intracellular signal transduction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HWX73017.1"
                     /translation="MPAAERINRKLAAILAADVVGYSRMMAADEAGTLAALKRHRETV
                     FDPAVAAHKGRVVKLIGDGTIVEFASVIDAVNCALSVQRPAEHAPDQRASQAAIVLRI
                     GINLGDVIMEGDDLYGDGVNIAARLEPLAEPGGICISSIVNESIGNRVDVRFQDGGDI
                     TVKNIDRPIRVWRWHPSITAVPSPSIAPNPGPNGTRQSIAVLPFTNMSGDPEQEYFSD
                     GISEDIITDLSKIAGLTVIARNSSFTYKGRSVDVREIGRELGVRSVLEGSIRRAGQRV
                     RITAQLIDATSGSHLWAERYDRDLTDIFAVQDEVTTQIVGALKVTLSPAEKARLVEKE
                     PSNIAAYDCVLRGREIMLGKDKNRETFVEAVTYFKKALELDAN"
BASE COUNT         1377 a         2659 c         2537 g         1204 t
ORIGIN      
        1 cgggcgacaa cgtgatcaac gcactcgccg gcgtcggcct cgaatgtgac gatgtcgacg
       61 tggtcgtgtg ctcgcacctg catcccgacc attgcggctg caacactttc ttcaggcgcg
      121 cgacctgcat cattcacgcc aaggagatcg aagcggcgcg cgcgccgggc gcggaagcgg
      181 cgggctatat cgccgccgag tgggagcagc cggttccgcc cgacgcgatc gacggcgagc
      241 gcgacctctt cggcgacggc cgcatcgtgc tgatcccctt gcccggccat acgccgggtt
      301 cgaccggcgc gctggtcgag ctcgaaaagt ccggaacgtt cctgctcgct tccgacaccg
      361 tcagcctgcg ctcgaccatc gataccggca tcattccgcg caacacctgg aacgccgagg
      421 cgctggccaa gtcgctcgcc gaggtcaggc gcatcgaggc gcgcggcgcc atcgtgctgt
      481 gcggtcacga cgaggcgcaa tggcagacgt tgcgcaaagg cgccgacgcc tatgaatgac
      541 gcgcccgaaa tgcatgcgcg gccgaagatc gtcggggcgc ggatcaagcg caccgaggac
      601 ccgcggctct tgaccgggct cggcgcctac accgatgacc ggcaggtgat gcgcgtgctg
      661 cacgtcgcct tccgccgcag cgatcaggcg cacgcccgca ttcgctcgat cgattgttcg
      721 gcggcgcgcg cggcgccggg cgtcgtcgcg gtgctcacgg cggaggattt gagcgcggcc
      781 gttcagccgc tggtcgcgac ctcgcgcatg cccaactact acccgacgcc gcttcttccg
      841 ctcgcgcaac acaaggtacg ctatgtcggc gagccggtgg tcggcgtcat cgcccagagc
      901 cgctaccacg ccgaggacgc cctcgagctt atcgccatcg actacgagcc gttggctgca
      961 gtcagcgacc cggaggcggc cgcgcgttcc ggcgcggcac tgttgcatga agaagccggc
     1021 agcaacgtgc tggtcagccg cgagttcaag cgcggcgacg tcgacgccgc cgcgcaatcc
     1081 gcgccggtgc gcgtcaaagg ccgcttccgc atgcaccgca agaccgcgct cgcgatcgag
     1141 ccgcgcgcct gtcttgccga atatgaagcg ggccgcgagg cgctgacgct tcattcggcc
     1201 acccaggtgc cgggcatcgt gcgcgacgcg ctggcgacgg cgctcgatat tcctggccat
     1261 cggatccgcg tggtcgcgcc ggatgtgggg ggcggcttcg gcggcaaggg ctcgctctat
     1321 ccggaagaaa ttttcgtctg cgccgcggcg cggcaattgc ggcgcgcggt caaatggacc
     1381 agcgaccgcc tggaggacct cgcggccagc aaccaggcct tcgatgaaat cgtcgacgca
     1441 gaattggcgc tcgatgcgga cggccggata ctcgcgctca gcgccgacgt tgtcggcgac
     1501 gtcggcgcct actcggttta tccgtggacc gccggcctcg aaccggtcca ggtggtgagc
     1561 ttcctgcccg gcccctaccg cattcaacat taccgcgccc gcacgcgcgc ggtcgcaacc
     1621 tcgaaggcgc cgaccggccc gtaccgcggc gtcggccgcc cgatctcaac cttcgtcatg
     1681 gaacggctga tggacatggc ggcggcgcgg atcggcatgg acgcgaagga cattcggctc
     1741 aaaaacctcg tcgcggcgga ggagcttcct tacaaggtcg cgtccggcat cgtctgggac
     1801 aaatcgggct ttcaggaatg cctcaatgcc gcttgcgccg cgatcggcta cgactcgttg
     1861 cgcgccgagc agaaagaggc gcgcgcggcc ggccgctggg tgggcatcgg catcgcctgc
     1921 tacgcggaat tgaccggcat cggctcgcgc atttccgtcg cgccgggcat gccgatcaac
     1981 accgggacgg aaaccgcgat cgttcgtatc gattcgaccg gcgcggtcac cgccgcattc
     2041 ggcgtcgccg cgcacggcca ggggttggag acaacgctcg cccaggtcgt cgccgagcac
     2101 ctcggcgccc gcttcgatga tattcggatt gcgcaaggcg acagttccgc ggtccccgga
     2161 ggtaccggca cctatgccag ccgcagcatg gtgctcgccg gcggcgcggg aacgcttgcc
     2221 gcccaggcgg tccgcgagaa ggtgctccac gccgcctcgc atcttctcga ggcatcggtc
     2281 gccgaccttg tcgcggaaga cggccgcgtg accgtcgtcg gcactgatcg ttcgatcagc
     2341 ttccgcgagg tcgcgcgcgc ggtctattcc gagctggcgc ggctgccggc ggaggcgcgc
     2401 ggcgagcttg ccgccaccag gacgtacgat ccggtgttcg gcaccacgag cgcggcgacc
     2461 catatcgcga ccgtggaaat cgacccggag acttatgaga ttcgcgtcga gcgcttcgtc
     2521 gttgccgaag attgcggaag gctggtcaat ccgctgatcg tcgacggcca ggtgcatggc
     2581 ggcgtcgcgc agggcatcgg cgctgccctc tatgaagaag tcatttatga cgagcgcggc
     2641 caggtcacga ccggcagcct cgtcgactat ctcgtcccct cggcgtgcga gatcccgccg
     2701 atgctggtgg tccatctcga aagcgagtcg ccaacgacgc tcggcggctt tcgcggcatg
     2761 ggcgaaggcg gcacgatcgg cgcgccggcg gcggtcgcca atgctgtcgc cgacgcgctc
     2821 gctccgctcg ggatcgaaat caacgaactt ccggcaacgc cggagcggct gttccgcctg
     2881 atcgaagcag cgcgggcgcg ccgcaaaccg tgaaagagcg aacatggacc tgggcctgac
     2941 tggcaagatc gcggtcgtga ccggcgggac gagcggcgtg gggcgcgaaa tcgcgctgag
     3001 ccttgccgcc gaaggcgcca atgtcgccgt caactaccgc agttcggcaa aggacgccga
     3061 aatcctggtc gacgagatcg tcgcgaaagg cggcaaggcg aaggcctaca aggccgacgt
     3121 ggccgatttc gccgccgtga aagccatggt ggacgacatc gtcaacgatt ttggcggcct
     3181 caacatcctg atcaacaatg ccgggctcgc aatacgccag cgcttcctgg agaccaagcc
     3241 cgacgactgg caccgccaga ttgacgcctg cctgtacggg gccatccact gctgccacgc
     3301 tgcggcgccg cacctcgacg ccgccgggaa cggccgcatc gtcagcgtca tcggcgattc
     3361 ctcgcgcgtg ggcgaatccg gcctggcgat cgtcgccgcc gcccgagccg gcgtcgttgc
     3421 cctgatgaaa tcgctggcgc gcgagctcgg ccgctccggt accaccgcga acacggtgtc
     3481 gctcggactg gtcgagacgc cacacgacaa ggactgggtc gacgccaacc gcgacaagct
     3541 gatcaagctc tacccgttgc gccgccttgg cgtcccgggc gacgttgcgc cgatggtggc
     3601 gctgctcgcg tcgccgcaca gcggctggat caccgggcag gtgctcagca tcagcggcgg
     3661 cttcagcatg gtctgaaaga gggacgaaag tgctgcgcac cgacctgatc gctccgattc
     3721 cggaattgtt gcgccggaat gcggcagcgc gcgcggccaa aatcgcctat cgcgacgcgg
     3781 agacctcggt cacctacgct gacctgttcg agcggaccgg caggctagcc ggacaccttg
     3841 ccgacgccgg cattgccgca aacgacaccg tcgcgatcat gctgcccagt tccgtcgcct
     3901 gggtcgaaag ctgcctcgcg atcgcccgcg ctggcgcgat cggcgtcccc atcagctatg
     3961 actcgagcga aacggaaatc gcctaccggc tcgccgatgc gaactgcagg gcggttttca
     4021 cgaccgccga gcgtggcgat ctgctggcgc ggctgcaggc ctcggcgccc aatcccggca
     4081 cactgatcgt caccgatcgc ggcgcgtgca gcgcacccgc gctgcgctac gcccacctgg
     4141 ccgcggccgc gccgcaatcg gcgccgagcg atcccccttc gctgcacgac acgtcgttca
     4201 tcctctacac gtcgggcacc accggacgcg ccaagggcgt gcggctcacc gtgcatggga
     4261 tgctgtgggt cgcggccgcg tgctgggcgc cgatcaccgg cctctccgag cacgacactc
     4321 tgctctcgcc gctgccgctg tttcattcct atgcgctgaa cctgtcggta ctcggcgtcc
     4381 tggcaaccgg cgcgagcgcc tgcatcatgg aaaagttctc gaccagcgaa gcggtgcgat
     4441 tgctcaagag cggccaattc acctacttcc ccggcgtgcc gacgatgttc cactacctgt
     4501 tgcaggcgac gcgcggcgaa ccagacctga gatttcccaa tctgcgtctt tgcgtatcgg
     4561 ccggcgccat catgccggcg acgctcaacc gcgagttcga agagcgtttc ggcacgcggt
     4621 tgctcgacgg ctacggcatc accgagactt cgaccatggt gacgatgaac tggccgagcg
     4681 gcggacggat catgggatcc tgcggcattc cgctgccggg tcttgcggtg cgcatcgtcg
     4741 acgcgagcgg cggcgacgtc gcgccggacc aggaaggcga gctgatcgtg cgcggcccca
     4801 acgtcatgcc gggctatcac aacaagccgg aagagacccg cagcgcgctg cgtgccggct
     4861 ggtaccacac cggcgacctc gccaagtgcg atgaaaacgg tttcgtcacc atcaccggac
     4921 gcctcaagga gctgatcatc cgcggcggcc agaacatcgc accggccgag atcgaggagg
     4981 tggtgaacag cttcgcggcc gtgctcgaca gcgcggtggt cggcattccg cacgagcatc
     5041 tcggcgaagt tccggcgctc ttcgtggtgc cgcgtccgca gcaggcgatc gacaacgaag
     5101 ctctgctcgc ccattgccgc cagcacctct cggcgtacaa ggtgccgcat gtcgttcgac
     5161 tgatcgccga gattccacgg accggatcgg gcaagatcat ccgctacagg cttcgcgaac
     5221 tgataaaggc gtaatggctg ggacaccggc cgcgccggga ggaatcgcac catgcctggc
     5281 aaaccctcgc gcaaacccga ctccgcgcgc aaggcaacgc cgaaaagccg gcgagggaac
     5341 gccggccgaa tcctgaccac gcatgtcggc agcctgatcc ggccgccaaa gctgcaggaa
     5401 ttcctcaagg cgcagcgcga cagggagcct tacgaacagg cggcgttcga cgcctgcctg
     5461 catgacgcgg tcgccgacgt cgtgcagaag caggcggaga tcggcctcga cgtcatcaac
     5521 gacggcgaat acggcaagac gatcagctgg tcacgctacg tgctcgagcg catgagcggc
     5581 ttcgagcaac gcgaccggcc ggcgcacgcc ggcatgccgg ccgccgtcgc cgggcgcgat
     5641 cgccgcgaat tcgcggaatt ctacgccgac tacgaccggc atcagggatt taccggcatg
     5701 accggctggg cgctgaccgg gcccattcgc tacaccggcc acgcggcgat cgcgcgcgac
     5761 atcgccaatt tcaaggctgc ggcgaagggc gcaaagaccg gcggcctgtt catggccgcg
     5821 gtcgcgccgg cgagcgtcgc ccccgaccgc accgacgaat actacaagag cgacgaggaa
     5881 tacgtcttcg ccatcgccga tgcgctgcac gaggaataca aggcgatcat cgatgccggc
     5941 ctgatcctcc aggtggacga cgcctacctg gcgctgacct acgaggtcat ggtgccgccg
     6001 aagacgctga aggactaccg caaatgggcg acgctccgca tcgaggcgct caaccacgcg
     6061 ctcaggggac tgccggagga gcgtacccgt tatcacgtgt gctggggtag ctggaacggg
     6121 ccgcatgcct tcgatgtcga gctcaaggac atcgtcgacc tcatcttgaa ggtgcgggtc
     6181 ggcggctacc ttctggaaat ggccaatccg cgtcacgaac acgaatggcg ggtatgggag
     6241 cgggtgaagc tcccgaaagg ccgcatgctc attcccggcg tcatctcgca cgcgaccaat
     6301 gtcgtcgaac accctgaact cgtggccgaa cgcctggtcc ggctggcgaa gctcgtcggc
     6361 cgcgacaatc tcatggccgg aaccgattgc ggcttcgcac aggggccgtt cgtgcagcgc
     6421 gtccaccctt cgatcatgtg ggccaagctg cggacgctcg tcgaaggcgc gcggcttgct
     6481 tcgaagcacc cgggggcgca ccgccgcgcg gcgtgagagt gaggcaaacg gaccacaggg
     6541 cggccaaaca tggcccccgg cggtctcgac ccgtggattt tccgaaatag tgcactacgt
     6601 acatagcgga actcaccccc gccacaggcc caggcacgcc cttcatgccc gccgcagaac
     6661 gcatcaaccg caaactggcg gccatcctgg cagccgacgt cgtcggctat tcacggatga
     6721 tggcggccga cgaagcgggc acgctcgccg ccttgaagcg gcatcgggaa accgtcttcg
     6781 acccggcggt cgccgcccac aaaggccggg tcgtgaagct gatcggcgat ggcaccatcg
     6841 tcgaattcgc aagcgtcatc gatgccgtga actgcgccct gtcggtgcaa cgccctgcgg
     6901 agcacgcacc ggatcaacgc gcctcccaag cggcgatcgt gttgcgcatc ggcatcaatc
     6961 tcggcgacgt gatcatggag ggcgacgacc tctacggcga cggcgtcaac atcgccgcgc
     7021 ggcttgaacc gctcgccgag ccaggcggca tctgcatctc ctcgatcgtc aacgagagca
     7081 tcggcaatcg cgtcgacgtc cgcttccagg atggcggcga tatcacggtc aaaaatatcg
     7141 accggccgat ccgcgtctgg cgctggcatc cgagcatcac cgccgtcccc tccccgtcca
     7201 tcgcgccaaa tcccgggcca aacggcacgc gtcaatcgat cgccgtcttg ccgttcacca
     7261 acatgtccgg cgatccggag caggagtatt tctccgacgg catcagcgag gacatcatca
     7321 ccgatttgtc gaagatcgcc ggcctgacgg tgatcgcgcg caattcgagc ttcacctaca
     7381 aggggcgctc ggtcgacgtc cgcgaaatcg gccgcgagct cggcgtgcgc tcggtgctcg
     7441 aaggctcgat ccgccgcgcc ggccagcgcg tgcgcatcac cgcacagctg atcgatgcga
     7501 ctagcggcag ccacctctgg gctgaacgct acgaccgcga cctgacggac atattcgcgg
     7561 tgcaggatga ggtcaccacg cagatcgtcg gcgcgctcaa ggtgacgctg agccccgccg
     7621 aaaaggcgcg tctggtggaa aaagagccgt ccaatatcgc tgcctacgac tgcgtgctgc
     7681 gcggccgcga gatcatgctc ggcaaggaca agaatcgcga gacgtttgtg gaagcggtga
     7741 cgtatttcaa gaaggcgttg gaactcgatg cgaacta
//
LOCUS       DATMQB010000385         2938 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1111833, whole genome shotgun sequence.
ACCESSION   DATMQB010000385 DATMQB010000000
VERSION     DATMQB010000385.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2938)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2938)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2938
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1111833"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..235
                     /locus_tag="VNY79_10985"
     CDS             <1..235
                     /locus_tag="VNY79_10985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="outer membrane beta-barrel protein"
                     /protein_id="HWX73018.1"
                     /translation="SGFTRSSSERSGWTAGVGFEYQLSTKWSLGLEYLYTDLGGSSNG
                     PPASIGSGSSLEVYNNALKTQSLLGRLNYKAGW"
     gene            complement(326..1264)
                     /locus_tag="VNY79_10990"
     CDS             complement(326..1264)
                     /locus_tag="VNY79_10990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HWX73019.1"
                     /translation="MADDDAEDGGTSVFVAASDGLKLHVREYGTRSAPGLPVVCLPGF
                     TRTAADFAALAPVLAEGPPQRRVIVIDSRGRGRSDYDSNPANYNLIVELSDILNVLIA
                     LAMRPAVFIGTSRGGLLTMLLGAAQPTMIAGVVFNDVGPVIEPKGLARIKSTVGNLPQ
                     PRSLQDGAEILRRLMSLHFPKLTADQWLGFAQQTWQMKNGAVVPIYDPRLARVFAGFD
                     IERRLPTLWNEFDTLAQVPMLVIRGANSDLLSAATVTAMRERRTKMEWFEVPDQGHAP
                     LLEGNDILSRIGQFVTTCEHATAKAPAAPAAASLAM"
     gene            complement(1379..>2938)
                     /locus_tag="VNY79_10995"
     CDS             complement(1379..>2938)
                     /locus_tag="VNY79_10995"
                     /inference="COORDINATES: protein motif:HMM:NF013618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HWX73020.1"
                     /translation="LLAQGDQAAAQAAMREAWRYDSFSADLEGQARAAFSGLITAADD
                     KVRMDVRFYADDDEAGLRAARHLDAAELVIAKARSAVVNKSSGAKAALEAVPAAARND
                     PGYLFSRIQWLRRSDKIADAAHALLAAPREPERLVDPDQWWVERRVVARKLLDLEEFK
                     LAYEVANGAATPANENYRGEQHFTAGWIALRFLRDPGTALAHFARIAEGVANPITLAR
                     SFYWQGRAAEALGRGQEARTHFEAAARYPTAYYGQLARARLGGGEIALRALPEPPPEQ
                     RRLEVARAFEILYAIEERDLVATMAADLADKTSDPGALTTLAEIATRHHDARSTLLIG
                     KTALGRGLPFEHYAFPAFGMPNYQQIGPEVEAPVVYSIARQESAFNPRVVSSANALGL
                     MQVTPDAGRFIAKKFNVAFDQRRLLEDPAYNAEIGTAELGDVINEFRGSYILAFASYN
                     AGQHRVKEWIEQYGDPRNPKIDPVDWIERIPFSETRNYVQRVIENMQLYRARMSNDSR
                     LLIEADLRRGG"
BASE COUNT          476 a          939 c         1022 g          501 t
ORIGIN      
        1 cagcggtttt acgcggagct cgtcagagcg cagcggttgg acggccggcg tcggcttcga
       61 atatcaattg tccacgaaat ggtcgctcgg gcttgaatat ctctacaccg atctcggcgg
      121 cagctcgaac ggcccgccag cctccatcgg ctccggaagc tcgctcgaag tctacaacaa
      181 cgcgctgaag acccagagcc tgctcggccg cctcaactac aaggccggct ggtagaatta
      241 tttgcgccgg acgcgtcctc gatccgtcgt cattccgggg cgcgatggca tgatctcagg
      301 caggcggcaa tactgaaaac tcgcgctaca tcgcgaggct tgctgccgcc ggagcggctg
      361 gcgccttggc ggtcgcatgc tcgcaagttg tcacgaattg accgatgcgc gagaggatgt
      421 cattgccttc gagcagcggg gcgtgtccct ggtcggggac ttcgaaccat tccatcttcg
      481 tgcgccgctc gcgcatcgcg gtcaccgtcg ccgccgacag cagatcggaa ttggcgccgc
      541 gaatgaccag catcggcacc tgcgcgagcg tgtcgaattc gttccacagc gttggcagcc
      601 ggcgctcgat gtcgaagccg gcgaacacac gggcgaggcg tgggtcgtag atcggcacga
      661 ctgcgccgtt cttcatctgc caggtctgct gtgcgaagcc gagccattgg tcggcagtga
      721 gcttggggaa atgcagggac atcagccggc gcaggatttc ggcgccgtcc tgcagactgc
      781 gcggctgtgg caggttgccg acggtacttt tgatccgcgc cagtcccttg ggctcgatca
      841 ccggaccgac gtcgttgaac acgacgccgg cgatcatggt cggctgcgcc gcgccgagaa
      901 gcatggtgag caggccgccg cgagaggttc ctatgaatac ggccggccgc atcgcgagcg
      961 cgatcaggac gttcaggatg tcggagagct cgacgatcag attgtagttc gccgggttgc
     1021 tgtcatagtc ggaccggccg cgcccacgtg aatcgatcac gatgacgcgc cgttgcggcg
     1081 gaccctcggc gagcaccggc gccagcgccg cgaagtcggc cgccgtgcgc gtgaagccgg
     1141 gcaggcagac gaccggcagt ccgggcgcgg agcgcgttcc gtactcgcgc acgtgcagct
     1201 tcaggccgtc ggatgcggcc acgaacacgc tcgtgccgcc gtcctctgca tcatcatcgg
     1261 ccatgtgaac tccactaccc gagcccgcga cgacaaaata tcgggatcag gattccatta
     1321 caattgaggc ggagcgcaaa ggcggcgtgc gcagagcgac gggaatgggg agcgtgggct
     1381 atccgccgcg gcgcaggtcg gcctcgatta gcagcctcga atcgttgctc atgcgggcgc
     1441 ggtagagctg catgttctcg atcacgcgct gcacgtagtt gcgcgtctcc gagaacggga
     1501 tgcgttcgat ccagtcgacc ggatcgatct tcggattgcg cgggtcgccg tactgctcga
     1561 tccactcctt cacccggtgc tggccggcat tgtacgaggc gaaggcgaga atgtaggagc
     1621 cgcggaattc gttgatgacg tcgccgagct cggccgtccc gatctcggcg ttgtaggcgg
     1681 gatcctcgag caggcgccgc tggtcgaagg cgacgttgaa cttcttggcg atgaagcggc
     1741 cggcgtccgg tgtcacctgc atcaggccga gcgcattggc gctcgagacc acgcgcgggt
     1801 tgaaggcact ttcctgccgc gcgatcgaat agaccaccgg cgcctcgacc tcgggtccga
     1861 tctgctggta gttcggcatg ccgaaggcgg gaaatgcgta atgctcgaac ggcaggccac
     1921 ggccgagcgc ggtcttgccg atgaggagcg tcgagcgcgc gtcgtggtgg cgggtggcga
     1981 tctccgcgag cgtggtcagc gcgccggggt ccgacgtctt gtcggcgaga tcggcagcca
     2041 tcgtggcgac gagatcgcgc tcctcgatgg cgtagaggat ttcgaaggcg cgcgcgactt
     2101 cgagccggcg ctgctccggc ggcggctccg gcaacgcgcg caaagcgatc tcgccgccgc
     2161 ccagtcgcgc ccgggcgagc tggccgtaat aggcggtggg atagcgtgcc gccgcttcga
     2221 agtgggtgcg cgcctcttgt ccgcggccga gcgcttcggc ggcgcggcct tgccaataaa
     2281 acgagcgcgc gagcgtgatc ggattggcga cgccttcggc gatgcgggcg aagtgggcga
     2341 gcgcggttcc cgggtcgcgc agaaagcgca acgcgatcca gcccgccgtg aaatgctgct
     2401 cgccgcgata gttctcgttc gccggtgtcg cggcgccgtt ggcgacctcg taggcgagct
     2461 tgaactcctc gaggtcgagc agcttgcggg caaccacccg ccgctccacc caccattggt
     2521 cgggatcgac cagccgctcc ggctcgcgcg gcgccgccag cagcgcgtgc gcggcgtcgg
     2581 cgatcttgtc ggagcggcgc agccattgaa tgcggctgaa caggtagccc gggtcgttgc
     2641 gcgccgcggc aggcactgcc tccagcgccg ccttggcccc cgacgattta ttgacgaccg
     2701 cggagcgggc cttggcgatc acgagttcgg ccgcatcgag atggcgcgcg gcgcgcaggc
     2761 cggcctcgtc gtcgtcggca tagaagcgga catccatccg caccttgtcg tcggccgcag
     2821 tgatcagacc ggagaacgcg gcgcgggcct gcccttcaag gtctgcggaa aaactgtcgt
     2881 agcgccacgc ttcgcgcatt gccgcctgcg cggcggcctg gtcgccctgt gcgagcag
//
LOCUS       DATMQB010000386         5996 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1113260, whole genome shotgun sequence.
ACCESSION   DATMQB010000386 DATMQB010000000
VERSION     DATMQB010000386.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5996)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5996)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5996
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1113260"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2304)
                     /locus_tag="VNY79_11000"
     CDS             complement(<1..2304)
                     /locus_tag="VNY79_11000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012329592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HWX73021.1"
                     /translation="MKISPDQPSGLSALDRPNSYIGRSVPRPNLARLTQGRGQYVSDV
                     VLPRMAHVAYLRSPHAHARIRSIGTQAARQAAGVVAVATGAELAKVITPWVGVLTHLK
                     GIKSAPQHAIAVERACWQGEAVCAVVARTRAEAEDACALIDVDYEALGAVTDPETALD
                     PATPVIHPELADNLTFERSLVGGDPDNGFAEADAIAEATFVFGRHTGVTNEPRAIVAD
                     WNPGEQRLTVYQGTQAPHMMQNLFAKHLGLEEHQVRVLTKDVGGSFGIKVHVYADEMA
                     TAALAKLLKRPVKFVADRLESFVADIHARDHRVKARIGVKRDGAITAFEIDDLTGIGP
                     YSVYPRTSGIEANQVVNLVGGPYACPNYRARARVVFQNKNVMCKYRAVGHPIATAVTE
                     GLVELAAAKIGMDPVELRRRNLIADDGYPATGASGIRFEKLSHHASLDKILAMMDYAG
                     LRAEQARLRERGIHRGIGFASFVEVTNPSAAFYGVGGARISSQDGATARLDATGAVFC
                     HTGVTEQGQGAESVVAQCVASAVGVPIERVRVITGDTDNVPYGGGTWASRAAGIGGEA
                     AWQAGKAPRANVLAAAASILQADPQALDIRAGVVVDADTGRERMGIEEVARIVYFRPD
                     TLPPGFQAELLVTRHYVPRAWPFAFTNGVQASYLEVDTTTGFVTLLRHWSVEDCGTVI
                     NPQLVDEQIRGGIVQGIGAALLEHCVYDDDGQLLNGNMMDYLVPMAPDMPDIEVGHVV
                     TPTTDSELGAKGAGEAGTAGAPACIMNA"
     gene            complement(2422..3192)
                     /locus_tag="VNY79_11005"
     CDS             complement(2422..3192)
                     /locus_tag="VNY79_11005"
                     /inference="COORDINATES: protein motif:HMM:NF014069.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HWX73022.1"
                     /translation="MNEHTRPLTLSERADELEEQMMQALNERIITKSVLFRMADGRVE
                     IDNGQALLAANPGKHFLMGADPRLSEMPEKPTLIDFFKARFASTSHMLQSATHALKGG
                     HSEKIVLACLLHDIGVASFIRCDHGYWGAQMLEPYVEEEVSWAVRMHQALRFFPDPSV
                     GYEYPQMYVKFFGADYKPEPYIVAEYERARNHKWYMSARLITLNDIYSFDPDAKVDLS
                     DFVDIIGRNFKQPKEGLGFDNSPSAHMWRTLMWPTRFL"
     gene            complement(3195..3683)
                     /locus_tag="VNY79_11010"
     CDS             complement(3195..3683)
                     /locus_tag="VNY79_11010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HWX73023.1"
                     /translation="MDTLDLDINMRVNGEDVQARIAPRKTLVDFLRDDLCLTGTHVGC
                     EHGVCGACAVRLDGEVVRGCLVFAVQCDGSRIETIEGLSDSGAIADLQMAFQRRNALQ
                     CGYCTPGMLIGAQELLAAGGVPSRDTIRAHLSGNYCRCTGYQAIVDAIESVAQMRAGK
                     AS"
     gene            3848..4606
                     /locus_tag="VNY79_11015"
     CDS             3848..4606
                     /locus_tag="VNY79_11015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018699822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HWX73024.1"
                     /translation="MPQSLRDLVAELALANRILAHERVLDAFGHVSVRHPADPGRYLL
                     SRSRSPLLVEPADILEYTLDSEPVKPAKVQPYAERVIHGCIYQARSDVMAVCHHHAAA
                     IMPFCVTGKPIAPVFHLGATIGEETPLWDQHDEFGDTNLLVVKQEEGRSLARALGRHA
                     VVLMKRHGATVVSGGLKELVSRAIFLCQNAEYQMRAHMLGTPQPLHRGEIKLAGAINL
                     MPGVVARTWEYWSTRLKAAGALPPAARGKLRTRR"
     gene            4726..>5996
                     /locus_tag="VNY79_11020"
     CDS             4726..>5996
                     /locus_tag="VNY79_11020"
                     /EC_number="3.2.1.21"
                     /inference="COORDINATES: protein motif:HMM:NF012457.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008422 - beta-glucosidase activity
                     [Evidence IEA];
                     GO_process: GO:0030245 - cellulose catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GH1 family beta-glucosidase"
                     /protein_id="HWX73025.1"
                     /translation="MMTMSRRNLLATFSGLFGAKLALRPGSATAEDLVFPADFVWGAS
                     TSSYQIEGAVDADGRGKSIWDVFSHTPGRIKGDDTGDVACDHYHRWAEDIEWLARGGF
                     NAYRFSTAWPRILPSGAGVVEHRGLDFYDRLVDGLMARGIAPWLCLYHWDLPQALQDE
                     GGWLKRDIAEKFADYARVVGRRLGDRVKHWAMFNEPNVHALFGYGAGSHAPGLTGLAN
                     MLAATHHQNLAHGRALQALRAEHSGLRLGTVISLQPVRASSDSPVDRRAAERFDALWN
                     GAFAEPLLQGFYPAAVAAEFAPLTAFGDLAVIHQPMDFLGINYYSRMYVANAPGSLLG
                     AWWGPIPGVTRFTAMGWPVTPEGLHEELTSLRDRYGDLELYVTENGACFDDRVDADGT
                     VHDDDRIAFLRDHLAAAHRALADGVNLRGYFV"
BASE COUNT          953 a         1986 c         2017 g         1040 t
ORIGIN      
        1 cgcgttcatg atgcacgccg gcgccccggc agtgccggct tcgccggcgc ccttggcgcc
       61 aagctcggaa tccgtagtcg gcgtcaccac gtggccgacc tcgatatcgg gcatgtcggg
      121 cgccatcggt acgagatagt ccatcatgtt gccgttgagg agctgaccgt cgtcatcata
      181 gacgcaatgc tcgagcaatg cggcaccgat gccctgcacg atgccgccgc ggatctgctc
      241 gtcgacgagc tgcgggttga tcacggtgcc gcaatcctcg acggaccagt gcctgagcag
      301 cgtcacgaaa ccggtcgtgg tgtcgacctc gagatatgac gcctgcacgc cgttggtgaa
      361 ggcgaacggc caggcgcgcg ggacgtaatg gcgcgtcacc agcaactcgg cctggaagcc
      421 tggcggcagg gtgtcggggc ggaaatagac gatgcgcgcg acttcctcga ttcccatgcg
      481 ctcgcggccg gtgtcggcat ccaccacgac gccggcgcgg atatcgaggg cctgcggatc
      541 agcctgcagg atcgaggccg cagccgcgag cacgttggcg cgcggcgcct tgccggcctg
      601 ccaggcggcc tcgccgccga tgccggccgc gcgcgacgcc caggtgccgc cgccataggg
      661 cacgttgtcg gtatcgccgg tgatgacgcg cacgcgctcg atagggacgc cgaccgcgct
      721 cgccacgcac tgcgcgacga ccgattccgc gccctggccc tgttcggtga cgccggtgtg
      781 gcagaacacg gcgccggtcg cgtcgaggcg ggcggtcgcg ccgtcctgcg aagagatgcg
      841 ggcgccgccg acgccgtaga acgcggcgga cggattggtc acctcgacga acgaggcgaa
      901 gccgatgccg cggtggatgc cgcgctcgcg cagccgcgcc tgctcggcgc gcagtccggc
      961 gtagtccatc atcgccagaa tcttgtcgag cgaggcgtga tgcgagagct tctcgaacct
     1021 gatgccggag gcgccggttg ccgggtagcc gtcgtcggcg atgaggttgc ggcgccgcag
     1081 ctcgaccggg tccataccga ttttcgccgc agccagctcg acgagaccct cggtgaccgc
     1141 ggtggcgatc gggtggccga cggcgcgata cttgcacatc acgttcttgt tctgaaacac
     1201 gacgcgggcg cgggcgcggt agttcgggca ggcgtacggg ccgccgacga ggttgacgac
     1261 ctggttcgcc tcgatcccgc tcgtgcgcgg atagaccgag taggggccga tgccggtcag
     1321 atcgtcgatc tcgaaggcgg tgatcgcgcc gtcgcgcttc acaccgatcc gcgccttgac
     1381 gcggtgatcg cgcgcatgga tgtcggcgac gaagctctcc agccggtcgg cgacgaattt
     1441 caccggccgc ttgagcagct tggccagcgc cgccgtcgcc atctcgtcag cgtagacgtg
     1501 caccttgatg ccgaaggagc cgccgacgtc cttggtgagg acacgcacct gatgctcctc
     1561 gaggccaagg tgcttggcaa acaggttctg catcatgtgc ggcgcctgcg tgccctgata
     1621 gacggtgagg cgttgctcgc cgggattcca gtcggcgaca atggcgcgcg gctcgttggt
     1681 gacaccggtg tggcggccga acacgaatgt cgcctcggcg atcgcgtccg cctcggcaaa
     1741 accgttgtcg gggtcgccgc cgacgagcga gcgctcgaag gtgagattgt cggcaagttc
     1801 gggatgaatg accggcgtcg ccggatcgag cgccgtttcc gggtcggtga cggcgccgag
     1861 cgcttcatag tcgacgtcga tcagcgcgca ggcgtcctcg gcttcggcgc gcgttcgcgc
     1921 gacgaccgcg cacaccgctt cgccctgcca gcaggcgcgc tcgaccgcaa tggcgtgctg
     1981 cggtgccgac ttgatgccct tgaggtgcgt gagcacgccg acccacggcg tgatcacctt
     2041 ggcgagttcg gcgccggtcg cgaccgcgac cacgcccgcc gcctgccgcg ctgcttgcgt
     2101 gccgatgctt ctgatccgcg catgcgcgtg cggcgagcgc agataggcga cgtgcgccat
     2161 gcgcggcagc accacgtcgc tgacatactg gccgcgcccc tgcgtcagcc gcgccagatt
     2221 gggccgcggc accgagcggc cgatgtagga attcggccgg tcaagcgcgc tgaggccgga
     2281 aggctgatca ggggagattt tcatcgcatt ctcagcccat cattccgcgg ccgagcgcag
     2341 cgaggcgccc ggaatcatat tccctgacct gtgactatgg attccgggtt cgcggccttc
     2401 ggccgcgccc cggaatgacg tttacaaaaa ccgcgtcggc cacatcagcg tgcgccacat
     2461 atgcgccgac ggcgaattgt cgaagcccag cccttccttc ggctgcttga aattgcggcc
     2521 gatgatgtcg acgaagtcac tgagatcgac cttggcatcc ggatcgaagg aatagatgtc
     2581 gttgagcgtg atcagccgcg cgctcatgta ccatttgtgg ttccgcgcgc gctcgtattc
     2641 ggcgacgata taaggctccg gtttgtagtc ggcgccgaag aacttgacgt acatctgcgg
     2701 atattcgtag ccgaccgacg gatcggggaa aaagcgcagc gcctggtgca tgcgcaccgc
     2761 ccagctcacc tcctcctcga cgtagggttc aagcatctgc gcgccccaat agccgtggtc
     2821 gcagcggatg aagctcgcga cgccgatgtc gtggaggagg caggcgagca cgatcttctc
     2881 gctgtggccg cccttgagcg cgtgtgttgc gctctgcagc atgtggctgg tggacgcgaa
     2941 gcgggccttg aagaagtcga tcagcgtcgg cttttccggc atttccgaca gccgcggatc
     3001 ggcgcccatg aggaagtgct tgccgggatt ggcggcaagc agcgcctgcc cgttgtcgat
     3061 ctcgaccctg ccgtcggcca tccgaaacag caccgacttg gtgatgatgc gttcattcag
     3121 tgcctgcatc atctgttctt caagctcgtc ggcgcgttcc gacagtgtca gcggtcttgt
     3181 gtgttcgttc attgtcagct tgcctttccc gcgcgcatct gcgcgacgga ctcgatcgca
     3241 tcgacgatcg cctgatatcc ggtgcagcgg caataattgc cggagagatg cgcgcgaatt
     3301 gtgtcgcgac tgggaacgcc gccggcggcc aagagctcct gggcgccgat gagcatgcca
     3361 ggcgtgcagt agccgcattg cagggcgttc cgccgctgga acgccatctg cagatcggcg
     3421 atggcgccgg aatccgacaa tccttcgatg gtttcaatgc gcgagccgtc gcactgcacg
     3481 gcaaagacga ggcagccgcg caccacctcg ccatcgagcc gcacggcaca ggcgccgcag
     3541 acgccgtgtt cgcaaccgac atgcgttccg gtcaggcaga gatcgtcgcg caggaaatcg
     3601 accagcgttt ttcgcggcgc aatgcgcgcc tgcacgtcct cgccgttcac gcgcatgtta
     3661 atgtcgaggt cgagcgtatc catgcggggc ctgggagccg cagcgtcccg cctattgtta
     3721 acatcgggca cgcgccgaga ccaccgcagc ggcgccccgg tcgattttgc aattgcgcgg
     3781 tcggccgctt gcggatttgc taggcgcgcc gggcagcccg agtggctgcc gcgcatggag
     3841 accgaccgtg ccgcaaagct tgagggatct cgtcgccgaa ctcgcgctgg cgaaccgtat
     3901 cctcgcccat gaacgcgtgc tcgatgcatt cggccatgtc agcgtgcgcc atccggccga
     3961 tccgggccgc tacctgttgt cgcgctcgcg ctccccgctg ctggtcgagc cggccgacat
     4021 tctcgaatac accctcgatt cggagccggt gaagcccgcc aaggtgcagc cctacgccga
     4081 gcgcgtgatt cacggctgca tctatcaggc gcgcagcgac gtgatggcgg tgtgccacca
     4141 tcacgccgcg gccatcatgc cgttctgcgt caccggcaag ccgatcgcgc cggtcttcca
     4201 tctgggcgcg actatcggcg aggagacgcc gttgtgggac cagcatgacg agttcggcga
     4261 caccaacctc ttggtggtga agcaggagga aggccgttcg ctcgcgcgtg ctctcggccg
     4321 gcacgcggtg gtgctgatga agcgccacgg ggcgaccgtg gtcagtggcg gattgaagga
     4381 gctggtgtcg cgcgccatct tcctgtgcca aaatgccgag tatcagatgc gcgcgcacat
     4441 gctcggtacg ccgcagccgt tgcatcgcgg cgagatcaag ctcgccggcg ccatcaatct
     4501 gatgcccgga gtcgtcgcca gaacttggga gtactggagc acacggctta aagccgccgg
     4561 agcgctgccg ccggcggcac gcggcaaact aaggacgcgg aggtgaacgt cggtctcggt
     4621 cgggaccgag gatactgtcc attccttgcc agggagcatc gggccggcga gcgggttcgg
     4681 cgtcgttgcc gtgccgcgcg caaactgagt cggccaggaa actgaatgat gacgatgtcg
     4741 cgccggaatc tgctggctac cttctcgggc ttgttcggcg caaagctggc gctgcgcccg
     4801 ggctcggcca cggctgagga cctcgtattc cccgccgact tcgtctgggg cgcctcgacc
     4861 tcgagctatc agatcgaggg agcggtcgat gccgacgggc gcggcaagag catctgggat
     4921 gttttttccc acacgccggg ccggataaag ggcgacgaca caggcgatgt cgcctgcgac
     4981 cactatcacc gctgggccga ggacatcgaa tggctggcgc gcggcggctt caacgcctac
     5041 cgcttctcga ctgcgtggcc gcgcatcctg ccgtccggcg cgggtgtcgt cgagcaccgc
     5101 ggcctcgact tctatgatcg cctcgtcgac gggctgatgg cgcgcggcat cgccccctgg
     5161 ctatgcctct atcattggga tctgccgcag gcgctgcagg acgagggcgg ctggctcaag
     5221 cgcgacatcg ccgagaaatt tgccgattac gcgcgcgtgg tcgggcgccg cctgggcgat
     5281 cgcgtcaagc actgggcgat gttcaacgag cccaacgtcc acgcactgtt cggctatggc
     5341 gccggctcgc acgcgcccgg gctcaccggt ctcgccaaca tgctcgccgc cacccaccat
     5401 cagaacttgg cccacgggcg cgcgctgcag gcgctgcggg ccgagcattc cgggctccgt
     5461 ctcggcaccg tgatctcgct gcagccggta cgggcgtcct cggacagccc ggtggaccgc
     5521 cgcgccgctg aacgcttcga cgcgctctgg aacggcgcct ttgccgagcc actgctccag
     5581 ggcttctatc ctgccgccgt cgccgcggaa ttcgcgccgc tgacggcgtt cggcgatctc
     5641 gccgtcatcc accagccgat ggattttctc ggcatcaact attacagccg catgtacgtc
     5701 gccaacgcgc ccggcagcct gttgggagcg tggtggggcc cgataccggg cgtgacccgc
     5761 ttcaccgcca tgggttggcc ggtcacgccg gaagggctcc acgaagagct gaccagcctg
     5821 cgcgaccgct acggcgatct ggaactctat gtcaccgaga acggcgcgtg cttcgacgac
     5881 cgcgtcgatg ccgacggcac cgtgcatgac gatgaccgca tcgcgttcct gcgcgatcat
     5941 ctcgccgcgg cgcatcgggc gctcgccgac ggcgtcaacc tgcgcggcta tttcgt
//
LOCUS       DATMQB010000387         2200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1422615, whole genome shotgun sequence.
ACCESSION   DATMQB010000387 DATMQB010000000
VERSION     DATMQB010000387.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2200
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1422615"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..265
                     /locus_tag="VNY79_11025"
     CDS             <1..265
                     /locus_tag="VNY79_11025"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73026.1"
                     /translation="GCMVVGCGVQEPLIVGFLIVLFTLSSIAMVFVSVAIWRSASNYP
                     REAWWQTPLAIAAKLCAAFSALVTTLSFLAVLYFSFDFIYAAF"
     gene            618..1193
                     /locus_tag="VNY79_11030"
     CDS             618..1193
                     /locus_tag="VNY79_11030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009488926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate-dependent dioxygenase AlkB"
                     /protein_id="HWX73027.1"
                     /translation="MKHEQLALFQPQSMPAGFRYAPDLIDAGEEARLVAAFADLPFKE
                     FAFHGFLGKRRVVSFGFRYDFNGGGLTEAEPMPSFLLPVCERAAAFAGLAPDRLQHVL
                     ITEYRPGAAIGWHRDRANFGDVIGVSLVSPCTFRMRRRRGTGWERAAMRLDRRSVYLM
                     RGPSRDEWEHSIPAVDALRYSITFRSMRDKA"
     gene            complement(1285..>2200)
                     /locus_tag="VNY79_11035"
     CDS             complement(1285..>2200)
                     /locus_tag="VNY79_11035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018642062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="TRCF domain-containing protein"
                     /protein_id="HWX73028.1"
                     /translation="SALEDVMAAFYDGKFDVLLSTAIVESGLDIPTANTLIVHRADMF
                     GLAQIYQLRGRVGRAKMRAYALLTLPSRRKITPQAERRLKVLQSLDTLGAGFQLASHD
                     LDIRGAGNLLGEEQSGHIKEVGYELYQQMLEEAILSLKAGISTPVADKWSPQIAIGTP
                     VLIPEDYVTDLPVRLALYRRLAEIEDEREIEAFAAELVDRFGPLPEEVDYLLQVVAIK
                     SLCRRANVERIEVGPKGAVLAFRDNVFSNPDGLITYIAKHPVGARVRPDMKVVFFDEW
                     ETPKARLKGAAGILRALTALAEKGQKAA"
BASE COUNT          320 a          735 c          717 g          428 t
ORIGIN      
        1 cggctgcatg gtcgtcggat gcggcgtcca ggagccgttg attgtgggat ttctcatcgt
       61 gctgttcacg ctctcgagca tcgccatggt gttcgtctcg gtcgccatat ggcgcagcgc
      121 atcgaactat ccgcgcgagg cctggtggca aacgccgctc gccatcgccg ccaagctgtg
      181 tgccgcgttc tcggcgcttg tgaccaccct gagcttcctt gccgtcctct atttcagctt
      241 cgacttcatt tacgccgcct tctgatattt tcccgcgccc gcttggcggg cagagcctgc
      301 cgccgcggct ctgttgtagc ccggatgaag cgcaccgaaa tccggagccg acgttcacgc
      361 tcgcccgatc gctcccggat ttcacttcgt tcatccgggc tacgcttgct ttgttcatcc
      421 gggctacgct tacttcattt acgaagtctg cggccgctgc gctgttgtag cccggatgaa
      481 gcgcagcgaa atccggggcc gacgttcacg ctcgccgatc gctcccggat ttcacttcgt
      541 tcatccgggc tacgctttac tcctttgcag gaccggcgcg ggacgactat ctgcgttctg
      601 caccatccgg cctcaccatg aaacacgagc agctcgcact ctttcaaccg caatcgatgc
      661 cggccggctt ccgctatgcg ccggacctga tcgatgctgg cgaggaagcg cgcctcgttg
      721 ccgccttcgc cgacctgccg ttcaaagagt tcgcgtttca cggcttcctc ggcaagcggc
      781 gcgtcgtgtc gttcggcttc cgctacgatt tcaacggcgg tggcttgacg gaggccgagc
      841 caatgccgtc gtttcttctt cccgtctgcg agcgcgccgc cgcgttcgcc ggtctcgcgc
      901 ccgaccgcct gcagcacgtg ctgatcaccg aataccggcc gggcgcggcg atcggctggc
      961 atcgcgaccg ggcgaatttc ggcgacgtga tcggcgtctc gctcgtctcg ccgtgcactt
     1021 tccggatgcg ccgccggcgc ggcaccggct gggagcgcgc cgccatgcgg ctcgatcgcc
     1081 gctcggtcta tctcatgcgc ggcccctcgc gcgacgaatg ggagcacagc atccccgcgg
     1141 tggacgcgct ccgctactcg atcacattcc ggtcgatgcg cgataaggcg tagcccggat
     1201 tgagcgcagc gaaatccggg acgggcgtcc caagctcgtg agccgctcag tgaatgcgcc
     1261 gctctacatt gcgcagaaag ggccttacgc cgccttctgc cccttctccg cgagcgcagt
     1321 cagcgcgcgc aagatgccgg cggcgccctt aaggcgcgcc ttgggcgtct cccattcgtc
     1381 gaagaagacg accttcatgt ccgggcgcac gcgggcgccg acggggtgct tggcgatgta
     1441 ggtgatgagg ccgtcggggt tgctgaagac gttgtcgcgg aaggcgagca ccgcgccttt
     1501 ggggccgact tcgatgcgct cgacattggc gcgccggcac agcgacttga tcgccacgac
     1561 ctggagcaga tagtcgacct cctcgggcag tgggccgaag cggtcgacga gttcggcggc
     1621 gaacgcctcg atctcgcgct cgtcctcgat ctcggcaagc cgacggtaga gcgcgagccg
     1681 caccggcagg tcggtgacgt agtcctcggg gatgagcacc ggcgtgccga tggcgatctg
     1741 cggcgaccat ttgtcggcga cgggcgtgct gataccggcc ttgaggctca ggatcgcctc
     1801 ctccagcatc tgctggtaga gctcgtagcc gacctccttg atgtggccgg actgctcctc
     1861 gccgagcagg ttgccggcgc cgcggatgtc gaggtcgtgc gaggcgagct ggaagccggc
     1921 gccgagcgtg tcgagcgact gcagcacctt gagccggcgc tcggcctgcg gcgtgatttt
     1981 ccgccggctc ggcagcgtca gcagcgcgta ggcgcgcatc ttggcgcggc cgacgcggcc
     2041 gcggagctga tagatctgag ccagcccgaa catgtcggcg cggtgcacga tcagggtgtt
     2101 ggcggtcggg atgtcgaggc cggattcgac gatcgcggtc gaaaggagga catcgaactt
     2161 gccgtcgtag aacgccgcca tcacatcctc gagcgcggac
//
LOCUS       DATMQB010000388         7802 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2978453, whole genome shotgun sequence.
ACCESSION   DATMQB010000388 DATMQB010000000
VERSION     DATMQB010000388.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7802)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7802)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7802
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2978453"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..317)
                     /locus_tag="VNY79_11040"
     CDS             complement(<1..317)
                     /locus_tag="VNY79_11040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011475244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HWX73029.1"
                     /translation="MPAVAAGPEIERLIQLLARLPGLGPRSARRAALFLIKKREALMA
                     PLAAALQTAIEKIEVCRVCGNIDTQNPCTVCTDARRDPSAIVVVADVADLWALERAHA
                     INAR"
     gene            complement(517..837)
                     /locus_tag="VNY79_11045"
     CDS             complement(517..837)
                     /locus_tag="VNY79_11045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HWX73030.1"
                     /translation="MADFLGMMKQAAELKSKMEAMQAELERMEVEGAAGGGFVTLKLS
                     GKGEIKAAHVDESLLKPDQREIVEDLIVAAHADARRKLETLLQERMQALTGGLSLPPG
                     LKLF"
     gene            complement(850..2670)
                     /locus_tag="VNY79_11050"
     CDS             complement(850..2670)
                     /locus_tag="VNY79_11050"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012494279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HWX73031.1"
                     /translation="MNDAATRSEAAASGAAAGSYRVLARKYRPATFTDLIGQDAMVRT
                     ISNAFETGRIPQAWILTGVRGVGKTTTARILARALNYELADGSVTGPTINMPVLGVHC
                     QAIMESRHLDVIEMDAASHNGVDDVRQINDAIRYAPVSARYKIYILDEVHMLSGAAFN
                     ALLKTLEEPPPHAKFVFATTEIRKVPITVLSRCQRFDLRRIDAGLLVQHLQGIAAKET
                     LTAEPEALALIARAAEGSVRDALSLFDQAIAHAAGPVRGDDVRQMLGLADRTRVIDLF
                     EALMRADLARALHELRDQYDAGADPAMVLGDLAEFTHFVTRIKAVPALAEDVSLTEAE
                     RTRGRTFAAKLSMRVLARTWQMLLKGLEEVAAAGRPLAAAEMALVRIAYAADLPTPDE
                     AIRALGDAARGNGSGAAATPASPGPAAPRAGAPRGATRAALAPAATLAAPASLPAAGQ
                     PAARNDAANAPARALRNFEELIALAGEKRDLGMKSTLERDVRLVRFEDGRIEIGLEPG
                     AAKTLTGDLSKKLGDWTGRRWMVIVSAEPGAPTLRAQAQSRKAELKDGVRGDPLVQAV
                     LTRFPGAEIVDVRPPAGEPVTMDETPFDAPGEPGRADDEP"
     gene            complement(2825..2920)
                     /gene="ffs"
                     /locus_tag="VNY79_11055"
     ncRNA           complement(2825..2920)
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="VNY79_11055"
                     /product="signal recognition particle sRNA small type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:14.4:RF00169"
                     /inference="COORDINATES: profile:INFERNAL:1.1.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00169"
     gene            3046..4617
                     /locus_tag="VNY79_11060"
     CDS             3046..4617
                     /locus_tag="VNY79_11060"
                     /inference="COORDINATES: protein motif:HMM:NF025714.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4403 family protein"
                     /protein_id="HWX73032.1"
                     /translation="MNPRSIILGVLVVAVSFIGATLAMNVLWPRSPASLKEGRPALAA
                     VPPLKPLAGVSTVLAPAAVTMSAIGEALNTQAPRNLAGKRPGAVSPLMPDADIHWTVT
                     RGPLNVSGQPDALVVTTPLSGAFQARGTISTAANAVGGAVGNIIGTVAGGVGQQVQNL
                     VGKTFDQRADIRGTVMATARPSIGPNWRLTPNLAAQINVADVVVPIAGVIKLSVAKEV
                     KPFLDNAVHEQTTALETRLRNDPFIENAARNEWSKLCRSISLGAAGQGMPNLWLEVRP
                     THAIAAQPKIDANALTLFVGVQAETRIVPAETKPDCPFPEQLEIVPQANEGTVEITVP
                     IDIPFTEVSRLIDEQLKDKTFPEDGSGKYAATIKQAEIAASGDRLLISLLVNVKRDGL
                     FSVGADATVHVWGRPLLDQEHQLLRFTDVKLDVQSKTAFGLLGEAAQAAVPYLQRTLA
                     EKAVIDLKPFAAEAKKRIAAAVTNFTGQAGGLNADVNINALRLTDIAYDDKALRVIAD
                     ADGTVNVTVSSLGMQ"
     gene            complement(4796..5746)
                     /locus_tag="VNY79_11065"
     CDS             complement(4796..5746)
                     /locus_tag="VNY79_11065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013891554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73033.1"
                     /translation="MEAIVYPAATASAAAATVDAQSGVSWAAVAAGAVAAAALTLLLV
                     AFGAGIGFSSISPWSDTGVSGSTFAVGTGIYLVIVAVMSSAVGGYLAGRLRTKWVGVH
                     TNEVFFRDTAHGFLAWAFATLLSATILTASTAYVANGVAAGAGGALAQAARSINPAEV
                     YVDKLLRPAPGSTQAAAPASAAEPNAAAANTATTPASAGAPGGATNPNQARSEILRLW
                     TADFAKDQDLNQSDKAYVAQVVVARTGLSPADAEKRVNEVVTEAKAATDKARRGAARL
                     SFWLTAAMLFGAFAASLAAAEGGALRDGTWNERVLTPRPI"
     gene            complement(6048..6311)
                     /gene="minE"
                     /locus_tag="VNY79_11070"
     CDS             complement(6048..6311)
                     /gene="minE"
                     /locus_tag="VNY79_11070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007591739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0032955 - regulation of division septum
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division topological specificity factor
                     MinE"
                     /protein_id="HWX73034.1"
                     /translation="MSLFRFLRRGSAPVARERLQILLAHERAASRGQTDLLGLLREEI
                     LAVISRHVSFEPDKVQIKMDRGKSVSTLEVDIEIPNGFGAAAA"
     gene            complement(6308..7123)
                     /gene="minD"
                     /locus_tag="VNY79_11075"
     CDS             complement(6308..7123)
                     /gene="minD"
                     /locus_tag="VNY79_11075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006073438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HWX73035.1"
                     /translation="MGQVLVVTSGKGGVGKTTSTAALGAALARGGDKVVVVDFDVGLR
                     NLDLVLGAERRVVFDLINVIHGVAKLTQALIRDKRLDNLCLLPASQTRDKDALTDSGV
                     ADVIAELRTKFDWIICDSPAGIERGATLAMRHADAAIIVTNPEVSSVRDSDRIIGLLD
                     SKTVKAERGEQVEKHLLITRYHAARAARGEMLSIEDVLEILSIPLLGIIPESQEVLRA
                     SNLGSPVTLNNAQSAPARAYFDAARRLKGEKLAMAVPSESRGILNKLFGRKAA"
     gene            complement(7158..>7802)
                     /gene="minC"
                     /locus_tag="VNY79_11080"
     CDS             complement(7158..>7802)
                     /gene="minC"
                     /locus_tag="VNY79_11080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016842306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004857 - enzyme inhibitor activity
                     [Evidence IEA];
                     GO_process: GO:0000918 - division septum site selection
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HWX73036.1"
                     /translation="TPQAPIVEWLAELDTSLERSESFFSGHPVALDLSSVSLSAAAIM
                     HLVENLAERKIRVLGITGVDPAIEEPGLPPILRGGRGPQQTTPDLPKAPTLVVNAAPP
                     RQQPASLLIETPVRSGQSVVFVDGDVTVLGSVGSGAEIVAGGSVHIYGTLRGRAMAGA
                     NGNSRARIFCQRVEAELLAIDSYYKTADEIEDSLRRQPIQAWLEGETLKISALN"
BASE COUNT         1283 a         2598 c         2627 g         1294 t
ORIGIN      
        1 cgcgcgttga tggcgtgcgc gcgttcgagc gcccacagat cggcgacgtc ggccaccacg
       61 acgatagccg acgggtcgcg ccgcgcgtcg gtgcacaccg tgcacggatt ttgcgtgtcg
      121 atgttcccgc acacccggca cacctcgatc ttctcgatcg cggtctgcag ggcggcggcg
      181 agcggcgcca tcagcgcctc gcgcttcttg atgaggaaca gggcagcccg gcgcgccgag
      241 cgcggcccaa gcccgggcag gcgggcgagg agctggatca ggcgttcgat ttcgggaccg
      301 gcggcgacgg ctggcattac tgttcccctc ccccttgtgg ggaggggctg ggggtggggg
      361 tcgggaggca gcgcggttgc tttgcggctt gcgtacgact ccggcgcgag catctggacg
      421 cgcgcgcgac ctcccgacct ccctctccct ctctgccctc ccccgcaagg ggggagggca
      481 tgaaggagcg gcgctggcgc ggttcgatca tcgtcatcaa aacagcttga gccccggcgg
      541 caacgacaac ccgccggtca gcgcctgcat gcgttcctgc aggagggttt cgagcttgcg
      601 gcgagcgtcg gcgtgggctg caacaatgag gtcttctacg atctcgcgct gatccggctt
      661 gagcaacgac tcgtcgacgt gcgcggcttt gatctccccc ttgccggaaa gcttgagggt
      721 gacgaacccg ccgccggcgg cgccttcgac ctccatgcgc tcgagctcgg cctgcatcgc
      781 ctccatcttc gatttgagtt cggcggcctg cttcatcatg ccaagaaaat cggccatcgc
      841 ggctcctgct caaggttcat cgtcggcgcg gccgggctcc ccgggggcat cgaacggcgt
      901 ttcgtccatg gtgacgggtt cgcccgcggg cggccgcacg tcgacaatct cggcgccagg
      961 aaagcgcgtc agcacggcct gcaccagcgg atcgccgcgt acgccatcct tcaactcggc
     1021 cttgcgcgac tgcgcctgcg cgcgcagcgt gggcgcgccg ggctcggcgg aaacgatgac
     1081 catccagcgc cgcccagtcc aatcgccaag cttcttcgaa agatcgccgg tgagagtctt
     1141 cgccgcacct ggctcgagcc cgatctcgat ccggccgtcc tcgaagcgca ccagccgcac
     1201 gtcgcgttcg agcgtgctct tcatcccgag gtcgcgtttc tcgcccgcga gcgcgatcag
     1261 ttcctcgaag ttgcgaaggg cgcgggccgg cgcgttcgcc gcgtcgtttc gcgccgccgg
     1321 ttggcccgcc gccggcagtg acgcgggcgc ggcgagcgta gccgccggcg ccaatgcggc
     1381 gcgcgtcgcg ccgcgcggcg ctcccgcgcg cggcgcggcc gggccgggcg atgccggcgt
     1441 cgcggcggcg cccgagccat tgccgcgcgc cgcatcgccg agcgcgcgga tcgcttcgtc
     1501 gggcgttggc aggtcggcgg cataagcgat gcggacgaga gccatctcgg cagcggccag
     1561 cggccgaccc gcggccgcga cctcttccag gcccttgagc agcatctgcc aggtccgcgc
     1621 cagcacgcgc atcgacagtt tggcggcgaa ggtgcggccg cgtgtgcgct ccgcctcggt
     1681 gagcgaaaca tcctcggcaa gggcgggcac ggccttgatg cgggtgacga aatgcgtgaa
     1741 ctcggcgaga tcgccaagca ccatcgccgg gtcggcaccg gcatcatact ggtcgcgtag
     1801 ctcgtgcaga gcgcgggcga gatcggcgcg catcaacgct tcgaagagat cgatcacgcg
     1861 ggtgcggtcg gcaagcccga gcatctgccg cacgtcatcg ccgcgcaccg gccccgccgc
     1921 gtgcgcgatc gcctgatcga acagcgacag cgcgtcgcgc accgagcctt ccgcggcgcg
     1981 cgcgatcagc gccagcgcct cgggctcggc ggtaagcgtc tccttggcag cgatgccttg
     2041 cagatgctgc accagcaaac cagcatcgat ccggcgcagg tcgaagcgtt ggcagcgcga
     2101 caggaccgtg atcggcacct tgcggatctc ggtcgtcgcg aacacgaatt tcgcgtgcgg
     2161 cggcggctcc tccagcgtct tcagcaacgc attgaaggcg gcgccggaga gcatgtgcac
     2221 ttcgtcgagg atgtaaatct tgtagcgggc ggataccggc gcgtatcgga tggcgtcgtt
     2281 gatctgacgg acgtcgtcaa cgccattgtg cgaggcggca tccatctcga tcacgtcgag
     2341 atgccggctt tccatgatcg cctggcagtg cacgccgagc accggcatgt tgatcgtcgg
     2401 gccggtgacg gagccgtccg caagctcgta gttgagcgcg cgcgcgagga tgcgcgcagt
     2461 cgtggtcttg ccgacgccgc ggacgccggt gaggatccag gcctgcggaa tgcgcccggt
     2521 ctcgaacgcg ttcgagatcg tgcggaccat cgcatcctgg ccgatcaggt cggtgaaggt
     2581 cgccggccgg tacttgcgcg cgagcacacg gtaggaaccg gcagcagcgc cgcttgcggc
     2641 agcctcgctc ctggtcgcgg cgtcgttcat tgtgtcgggg accccgccgc ttcgcatccg
     2701 agttccgtcg gccggaactg gcgaagatga aacacaacga aatcccggtt cccgtgcttg
     2761 agttcgatcg cggcaccccg catttcgctg cgcttcatgc gggctacgta cgaggtgtga
     2821 gaaagtggga ggctgacgag cgacccgaac cgcgctcgtt agggctgctt ccttccggac
     2881 ctgacccggt tggcgagtgg ctcgtccacc gccaacctcc cgcgtcctat atcggccgca
     2941 gttggggaga aagcaagcgc cgcccgcacc tcgctaacgc accaagtcta tcgccctacg
     3001 tgtgcagcac gtatagtagc caagtggcaa tgttttagga cgtgaatgaa cccccgcagc
     3061 atcatcctcg gcgtcctggt cgtcgccgtc tccttcatcg gtgcgaccct ggcgatgaat
     3121 gtcctatggc cgcgctcacc ggcttcgctc aaggaaggac ggccggcgct agcggcggtg
     3181 ccgccgctca aaccgctggc cggcgtatcg acggtgctcg cgcccgccgc cgtcaccatg
     3241 tcggcgatcg gcgaagcgct caatacacaa gccccgcgca atcttgccgg caagcggccc
     3301 ggcgcggtct cgccgctgat gcccgacgcc gacatccact ggaccgttac ccgcgggccg
     3361 ctcaatgttt ccgggcagcc tgacgcgctg gtggtgacaa cgccgctctc cggcgcgttc
     3421 caggcgcgcg gtacgatcag caccgcggcc aacgccgtcg gcggtgcggt cggcaacatc
     3481 atcggcaccg tcgccggcgg cgtcggccaa caggtgcaga acctcgtcgg caagacgttc
     3541 gatcagcgcg ccgacatccg cggcacggtg atggcgacgg cgcggccgag catcgggccg
     3601 aactggcggc tgacgcccaa tctcgccgcc cagatcaatg tcgccgacgt cgttgtcccg
     3661 atcgcgggcg tgatcaagct cagcgtcgcc aaggaggtga aacctttcct cgacaacgca
     3721 gtgcacgagc agacaaccgc actggaaacg cggctgcgca acgatccgtt catcgaaaac
     3781 gccgcccgca acgaatggag caagctctgc cgctcgatct cactcggcgc ggccgggcaa
     3841 ggcatgccca atctctggct cgaggtgcgt ccgacgcacg ccatcgcggc gcagccgaag
     3901 atcgacgcga atgcgctcac gctgttcgtc ggcgtgcaag cggaaacgcg catcgtgccg
     3961 gcggagacca agcccgattg cccgttcccc gagcagctcg agattgtgcc gcaggccaac
     4021 gagggcacgg tggaaatcac cgtgccgatc gacataccct ttaccgaggt gagccggctc
     4081 atcgatgagc agctcaagga caagactttt cccgaggacg gcagcggcaa gtacgcggcc
     4141 accatcaagc aggccgaaat cgccgcctcg ggcgaccgcc tgctgatttc tctcctggtc
     4201 aacgtgaaac gggacggctt gttcagcgtc ggcgccgatg cgacggtgca cgtctgggga
     4261 cggccgctgc tggatcagga gcatcagctc ctgcgcttca ccgacgtcaa gctcgacgtt
     4321 caatccaaga cggcgttcgg gctgctcggc gaagcggcgc aggcggccgt gccttatctg
     4381 cagcgcacgc tcgccgaaaa ggcggtcatc gacctcaagc cctttgcggc ggaggccaag
     4441 aagcgcattg ccgcagccgt caccaatttc accggccaag ccggaggcct taacgccgac
     4501 gtcaacatca acgcgctgcg gctcaccgac attgcctacg acgacaaggc gctacgcgtc
     4561 atcgccgacg ccgacgggac cgtgaatgtg acggtctcgt cgctgggcat gcaatagact
     4621 gcatcattcg gattacgctg ccgcgggcac gctgtgacga cggttcagtg gcgcgcggcc
     4681 tctactgtta aggaccggcg gttgctcacc gccagaacag cgccagcagg atgatgatcg
     4741 ggataggaac gccaagcagc cagaggagaa tggctctgcc cacgggaaat gctccttaga
     4801 tcggccgggg ggtgaggacc cgttcgttcc atgtgccgtc gcgcaatgcg ccgccttcgg
     4861 ccgcggcaag gctcgcggca aaggccccga acagcatggc tgcggtcaac cagaacgaaa
     4921 gcctggccgc gccccggcgt gccttgtcag tcgccgcctt ggcttccgtg accacctcgt
     4981 tgacgcgctt ctcagcgtcg gccgggctga ggccggtccg cgcgaccacg acttgcgcca
     5041 cataagcctt gtcgctttgg ttgagatcct gatccttggc gaagtcggcg gtccacaggc
     5101 gcaggatttc acttcgcgcc tggttcggat tggtggcgcc gcccggcgcc ccggcgctcg
     5161 ccggggtggt tgccgtattg gcagcggctg cattcggctc cgccgcggac gcgggcgccg
     5221 ccgcctgcgt cgagccggga gccggccgca gcagcttgtc gacgtagact tccgcgggat
     5281 tgatggagcg cgccgcctgc gcgagcgcgc cgccggcgcc tgccgcaacg ccgttcgcga
     5341 catacgcggt gctcgcggtc aagatcgtcg cgctcagcaa ggtcgcgaag gcccaggcca
     5401 gaaagccgtg cgcggtgtcg cgaaagaaca cctcgttggt atggactccg acccatttgg
     5461 tgcgcaatcg gccggcgaga tagccgccca cggccgacga catgacggcg acaatcacca
     5521 gatagatgcc ggtgccgacc gcgaaggtgg accccgatac gccggtgtcg ctccacggcg
     5581 atatggacga aaagccgata ccggccccga aggcgacgag gagaagcgtc agcgccgccg
     5641 ctgcgacggc tcccgcggcg actgccgccc acgagacgcc ggattgcgcg tccacggtcg
     5701 cggctgccgc gctcgccgtg gccgctggat agacaatggc ttccattgaa agaactcccg
     5761 gagagcaagg gttgcaaaac cctcgcgcag ttcaatggca tcaattcgat tgtttgcgga
     5821 aagttccgtc ggcgcgcttc ctgaaagtcg tgatcccgac ttggatgcgg tcgaccagcg
     5881 gcaactaaca aatactccaa aactggggtc gtaacgttgt taggcgggag aaaatttggg
     5941 gctgaaacaa cgccgccgcc ggcccatggg gtgggcggcg gcggtgacga gttgtcgcgg
     6001 cgcttcaacg gcggccggcc ggcggcgaga tcggctggcg cgtcgcctta cgccgcggct
     6061 gcgccaaaac cgtttggaat ctcgatgtcg acttcgagcg tcgataccga tttgccgcga
     6121 tccatcttga tctgcacctt gtccggctcg aacgagacgt gccggctgat cacggcgaga
     6181 atctcctcgc gcaggaggcc gagcaggtcg gtctggccgc gtgaggcggc gcgctcgtgc
     6241 gcgagcagga tttgcaggcg ttcgcgcgct accggcgcgg agccgcggcg aaggaatctg
     6301 aacaggctca tgctgctttc cgtccgaaca gcttgttgag aatgcccctg ctttcactag
     6361 gaacagccat cgcgagtttc tcgcccttga gtcgccgggc ggcgtcgaag taggcccgcg
     6421 ccggagcgct ctgcgcattg ttgagtgtta ccggtgagcc gagattggaa gcgcgcagga
     6481 cttcctggct ttcgggaatg ataccgagaa gcgggatgga gaggatttcg agcacgtcct
     6541 cgatcgacag catctcgccg cgggcggcgc gtgccgcatg gtagcgcgtg atcaacaggt
     6601 gcttttcgac ctgctcgccg cgctccgcct tgaccgtctt ggaatcgagg agcccgatga
     6661 tgcggtcgga atcgcgcacc gacgatacct cgggattggt gacgatgatc gcggcgtcgg
     6721 cgtgccgcat ggcgagcgtg gcgccgcgtt cgatcccggc cggactgtcg cagatgatcc
     6781 agtcgaattt cgtgcgcagc tcggcgatga cgtcggcgac gccgctatcg gtgagcgcgt
     6841 ccttgtcgcg cgtctgcgag gccggcaaca ggcagagatt gtccagccgt ttgtcgcgaa
     6901 tgagcgcctg cgtcagcttg gcgacgccgt ggatgacgtt gatcaggtcg aagacgacgc
     6961 gccgctcggc gccgagcacg aggtccaggt tccgcaggcc gacgtcgaaa tcgaccacca
     7021 cgaccttgtc gccgccccgg gccagcgccg cacccagcgc cgccgtcgaa gtggttttgc
     7081 cgacgccgcc tttacctgat gtcacgacca agacctggcc catgtcgcta cctttcgttg
     7141 tcctagacgt tctgatccta gttaagggcg gaaattttca gcgtttcgcc ttcgagccag
     7201 gcctggatcg gctggcggcg caggctgtcc tcgatctcgt cagcggtctt gtagtaggag
     7261 tcgatggcga gcagctcggc ctcgacgcgt tggcagaaaa tgcgggcgcg ggaattgccg
     7321 ttggcgccgg ccatcgcccg cccgcgcagc gtgccgtaga tgtggaccga acctccggcc
     7381 acgatctcgg cgcccgatcc gaccgagcca agcacagtca cgtcgccgtc tacgaatacg
     7441 accgattgtc ccgagcgcac tggcgtctcg atcaagagcg acgccggctg ttgccgcggc
     7501 ggcgcggcat tgacgacgag ggtcggcgcc ttgggcagat cgggcgtcgt ctgctgcgga
     7561 ccgcggccgc cgcgcaggat cggtggcagc cctggttcct cgatggcggg atcgacaccg
     7621 gtgatgccga gcacgcggat tttgcgctcc gccaggttct cgacgagatg catgatcgcg
     7681 gcggcgctca aactgaccga cgacagatcg agcgccaccg ggtgtccgga gaagaagctc
     7741 tcggagcgtt ccaggctggt gtcgagttcg gcgagccact cgacgatggg cgcctgtggc
     7801 gt
//
LOCUS       DATMQB010000389         4451 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2336062, whole genome shotgun sequence.
ACCESSION   DATMQB010000389 DATMQB010000000
VERSION     DATMQB010000389.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4451)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4451)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4451
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2336062"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..866)
                     /locus_tag="VNY79_11085"
     CDS             complement(<1..866)
                     /locus_tag="VNY79_11085"
                     /inference="COORDINATES: protein motif:HMM:NF019430.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0042597 - periplasmic space [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Spy/CpxP family protein refolding chaperone"
                     /protein_id="HWX73037.1"
                     /translation="MFWPFLLGDIFSFALWPYGYYDPFWAYGPAFFLASIFAPGPYFG
                     PEYGYGPAYYGSGGYYAYAGSSGGSPNIYYGRSAATPALTPQDRQELVETNTQAMQSC
                     GSLAPGVSDLPIAQIQAAVHPTAEQSAALDELNAAVSKASEIVAASCTKDVPLTPVGR
                     LDAAEKRLDGTLKAVQVVRTPLQNFYDSLSEEQRQRFDALGQSGRPGATGGDLTQLCS
                     KQAGGMTDLPIQRIEQVVQPTAEQQDAFNGLKAGSAKAAEGLQASCPAQTPTTPLARL
                     DAVGTRLKAMLTA"
     gene            936..1757
                     /locus_tag="VNY79_11090"
     CDS             936..1757
                     /locus_tag="VNY79_11090"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73038.1"
                     /translation="MMPPGSVAECVAVEPRAVEVVQTMKIVRGELIVRDLGARDLIVG
                     KPVMGAQPVARAELVVSAELVVVSRECIVVGGEIVLGKAVAAGAEPVRMAGKAGRVAG
                     GPMAGERMGREVVPGKRAAAQRMAGKGMTPKGVAAEAVETAAANVGSAKVAAPAEMGA
                     AAGVPTTTTAAATTTTSPGRRYVGCRQKRAQGGAGRENSNHPFRHHTFRHGQPPSSVA
                     PTGANEYSRGQRNKRTTSALQTFSTREGLLSLAVKFAQGCTAQSVQEHAAGCGGQ"
     gene            1796..2590
                     /gene="thiD"
                     /locus_tag="VNY79_11095"
     CDS             1796..2590
                     /gene="thiD"
                     /locus_tag="VNY79_11095"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008902 - hydroxymethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_function: GO:0008972 - phosphomethylpyrimidine kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HWX73039.1"
                     /translation="MTAIALTIAGSDSTGGAGIEADLKTFSALGVYSACVITALTAQN
                     TTGVFGIHAVPADFIGAQMDAVFSDLDVGAVKIGMLANAPAIDAVAAALDRHRARNVV
                     LDPVMVASSGERLLPADATDRLRHLIRRVRVLTPNLPEAAALLDAPLADDEATMRAQA
                     EKLLATGAGAVLIKGGHRGGAESVDLLVDAAGCLRLAAPRIETRNTHGTGCTLASAIA
                     AGLAKGLALGEAAKAAKAYVSAAIAAADRLKVGHGRGPVHHFHDWW"
     gene            2704..3588
                     /locus_tag="VNY79_11100"
     CDS             2704..3588
                     /locus_tag="VNY79_11100"
                     /inference="COORDINATES: protein motif:HMM:NF012770.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HWX73040.1"
                     /translation="MKSAIPYAEHGGVRLVGDLYLPAGRGKAPVVVAFHGGAWRSGSR
                     AFYRYWGPFLARNGYAVFTADYRLGKPGRYPAAVEDAKAAVEFMRARADEFQIDVERI
                     GLMGDSAGGHLAALLALAADRFTATHGDDADATIPVNVKAVVGFYGIYDMLAQWNHDT
                     LAEQNQEIVAQRNRDFIPRPRDSITQQFLGASPAQNPRLYSESSPISHATADGQIADR
                     NKVRFLLINGARDELVEPESQSGAFAAALTNAGFSVQRFVIPEAGHFWVSDPFEKDPQ
                     SFGAMAATPLLRFLDASL"
     gene            3658..4065
                     /locus_tag="VNY79_11105"
     CDS             3658..4065
                     /locus_tag="VNY79_11105"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF015925.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="putative quinol monooxygenase"
                     /protein_id="HWX73041.1"
                     /translation="MRKSIAATAAAVTLAAAAWLLQPIPSHEAAAQSAPLHIHAVDID
                     VVPGQIDNYLAALKENGAASVKEPGCREFDITVSQKDPNHVFIFEVYDDAAAAQAHRE
                     TEHFKKYAAATKDMVAKREVRPLASVAMNIKRM"
BASE COUNT          791 a         1473 c         1457 g          730 t
ORIGIN      
        1 gccgtcagca tcgccttgag ccgggtcccg actgcgtcga gacgcgccaa cggtgtcgtc
       61 ggcgtttgcg ccgggcagga cgcctgtagc ccctccgcag ccttcgcgga tcccgccttg
      121 agtccgttga aggcatcctg ctgctccgcc gtcggctgca cgacctgctc gatgcgctgg
      181 atcggcagat cggtcatgcc gccggcctgc ttgctgcaga gctgcgtgag atcgccgcca
      241 gtcgctcccg gcctgccgga ttggccgagt gcgtcgaacc gctgcctctg ctcctcgctc
      301 agcgagtcgt agaagttctg cagcggcgtg cgcacgacct gcaccgcctt gagcgtgcca
      361 tcgagccgtt tctcggcggc gtcgagccgg ccgaccgggg taagcgggac atccttggtg
      421 caagaggctg cgacgatctc gctggccttc gatacggccg cgttcagttc gtcgagcgct
      481 gcgctctgct cggcggtcgg atgcaccgcc gcttgtatct gcgcgatcgg taggtcgctg
      541 acgccgggcg cgaggctgcc gcagctctgc atcgcctgcg tgttggtttc gaccaactcc
      601 tggcgatcct gcggggtcag agccggcgtg gcggccgagc ggccgtagta gatgtttgga
      661 gagccgccag aagagccggc ataagcgtag tagccgccag acccgtagta ggcaggtcca
      721 tagccgtatt cgggtccgaa ataaggtccg ggggcaaaga tgctggcgag gaagaacgcc
      781 gggccgtagg cccagaacgg atcgtagtag ccataaggcc acaaggcgaa ggagaagatg
      841 tcgccgagca ggaacggcca gaacaccggc ccggcccagc cgccccatcc attgccccaa
      901 ttattccatc cggcgccgta gaagcggccg ccccagtgat gccacccggc tccgttgccg
      961 aatgcgttgc ggttgaaccc cgtgcggttg aagttgtgca gaccatgaaa attgtgcgcg
     1021 gcgaactgat tgtgcgtgat ctgggcgcgc gtgatctgat tgtgggcaaa ccggtcatgg
     1081 gcgcccaacc cgttgcccgg gccgagctgg ttgtgagcgc cgagctcgtg gttgtgagcc
     1141 gcgagtgcat tgtcgtgggc ggcgagattg tgctcggcaa ggccgtggcg gccggcgccg
     1201 aaccggtccg catggccggc aaggccggcc gcgtggctgg cgggcccatg gccggcgaaa
     1261 gaatggggcg cgaagtggtg cccggcaaac gcgcggccgc ccaacgcatg gctggcaaag
     1321 gcatgacccc caagggcgtg gccgccgaag ccgtggaaac cgccgccgcc aatgtgggct
     1381 ccgccaaagt ggccgccccc gccgaaatgg gcgccgccgc cggcgtgccc accaccacca
     1441 ccgccgccgc gaccaccacc acctcgcccg gccgccgata cgtcggttgc cgtcaaaagc
     1501 gcgcacaggg cggcgctggt cgcgagaatt ccaatcatcc gtttcggcat catacttttc
     1561 gccatggcca acctccgtcg tccgttgcgc cgacgggtgc taatgagtat tcccgcggtc
     1621 agcgcaacaa gcgcaccacc tctgcactcc aaactttttc gaccagggaa gggttgctgt
     1681 cattggcagt taaatttgcg caaggttgca ccgcacaatc cgttcaagag cacgcggccg
     1741 gttgcggcgg tcagtaggca gggtcaaata agcggccatt cgacaggagc gttccttgac
     1801 ggccatcgcc ttgaccattg ccggctcgga ttcgaccggc ggcgccggca tcgaggcgga
     1861 cctcaagacc ttttccgcgc tcggcgtcta tagcgcgtgc gtcatcaccg cgcttacggc
     1921 gcaaaacacc acgggcgttt tcggcatcca tgcggtgccc gcggacttca tcggcgcgca
     1981 gatggacgcg gtgttctccg acctcgacgt cggcgcggtg aagatcggca tgctggccaa
     2041 tgccccggcg atcgacgcgg ttgccgcggc gctcgatcgc catcgcgcgc gcaatgtcgt
     2101 gctcgatccg gtgatggtgg cgagctcggg cgaacgactg ctgcccgcgg acgcgaccga
     2161 ccggctgcgg cacttgatcc ggcgcgtacg cgtgctcact ccgaacctgc cggaagccgc
     2221 cgcactcctc gatgcgccgc tcgccgatga cgaagcgacg atgcgcgccc aggcggaaaa
     2281 gctgctggcg acgggcgccg gtgcggtgct gatcaaaggc ggccatcgcg gcggtgcgga
     2341 aagcgtcgac cttctcgtcg acgccgccgg ctgcttgcgc cttgccgcgc cgcggatcga
     2401 gacgcgcaat acccacggca ccggctgtac gctcgcgtcc gccatcgcgg ccgggctcgc
     2461 caaggggctt gcgctcggag aggcggcaaa ggcggcgaaa gcctatgtga gcgccgccat
     2521 cgccgcggct gaccggctca aggtcggcca cggccgcggg ccggtgcatc attttcacga
     2581 ctggtggtag cctcggcgcg aacctggaaa gcgaggacga tgcgcctcct cctgctgctt
     2641 gtccccgcgc tcgcaacgct tcttgcgaat ccttgcgcgt cagccgcaaa ttacaaggtc
     2701 acgatgaagt ctgccattcc ctatgccgag catggcggcg tcaggctggt cggcgacctc
     2761 tatctccccg caggccgagg gaaggcgccg gtcgtggtcg cgtttcacgg cggcgcctgg
     2821 cggtcgggca gccgcgcgtt ctacaggtac tgggggccgt ttctcgcccg caacggctac
     2881 gcagtgttca ccgccgatta ccgcctgggc aaacccggcc gctatccggc ggcggtcgag
     2941 gatgccaagg cggcggttga gttcatgcgc gcaagagccg acgaattcca gatcgacgtt
     3001 gagcgcatcg ggctcatggg cgattcagcc ggagggcatc tcgcggcgct gctggcgctc
     3061 gcggccgacc gctttaccgc gacgcacggc gacgatgccg atgccaccat cccggtcaat
     3121 gtgaaagccg tggtcggatt ctacggcatc tacgacatgc tggcgcaatg gaatcacgat
     3181 acgctggcgg agcagaacca ggagatcgtg gcgcaacgga atcgcgactt catcccgcgt
     3241 ccccgcgaca gcatcactca gcaattcctc ggcgcctcgc cggcgcagaa tccgcgcctc
     3301 tattccgaat cgtcgccgat cagccatgcg accgccgatg gacaaattgc cgatcgcaac
     3361 aaggtgcgct tcctgctcat caacggcgcc cgcgacgaac tcgttgaacc ggaaagccag
     3421 tcgggcgcct tcgccgcggc gctcacgaac gccggtttct cggtgcagcg cttcgtcatt
     3481 cccgaagccg gccatttctg ggtgtccgac ccgttcgaga aggaccctca gagctttggg
     3541 gcgatggcag cgacaccgct gctgcgattt cttgacgcct cgctctgaac attggagcaa
     3601 ggtgccggca acggcgaagg ccggtgccga cgttcatgac cgaaggagaa actgatcatg
     3661 aggaaatcaa tcgcggcaac cgccgccgcc gtcacgcttg ccgctgcggc gtggctgctg
     3721 caaccgatcc cgagccacga ggccgcggcg cagtcggcgc cgctccatat ccatgccgtc
     3781 gacatcgacg tcgtgccggg ccagatcgac aactacctcg cggcgctcaa ggaaaacggc
     3841 gcggcctccg tcaaggagcc gggctgccgc gagttcgata tcacggtttc gcagaaggat
     3901 ccgaaccacg tgttcatttt cgaagtctac gacgatgccg cggcggcgca ggcgcaccgc
     3961 gagaccgaac acttcaagaa atacgcggcg gcaaccaagg acatggtcgc caagcgcgag
     4021 gtgcggccgc tggcttcggt ggcgatgaat atcaagcgca tgtgatctct gcccgactga
     4081 tcggcgcaga cgatcgtccg tcgcccgctg tcagaatttg aagccggcgc cgacgcgggc
     4141 ctggtaaccg tgagcaggac attggcaatg ggggcaaagc gggtacattc gtactcgcca
     4201 cgcacaaaaa tgtttggcgt gagtgcgacg tccatgccgc cgccgacggc gaagccatac
     4261 agcaactctc cgcttttccc ggcgcttcca tcaaaggaga aagagccaca cgcaccgccc
     4321 ccgctagggc attggaggac agaaacattt gccgcgacgg caatgtcggc acgacccaag
     4381 gcaaagccga caaatccata aggcaggaaa ttgccgagaa cccagccggc ccgtgcacgc
     4441 agcgagagaa a
//
LOCUS       DATMQB010000390         2603 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1118085, whole genome shotgun sequence.
ACCESSION   DATMQB010000390 DATMQB010000000
VERSION     DATMQB010000390.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2603)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2603)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2603
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1118085"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(292..1344)
                     /locus_tag="VNY79_11110"
     CDS             complement(292..1344)
                     /locus_tag="VNY79_11110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007607611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HWX73042.1"
                     /translation="MVPLNARLREDSSAPKSVSSVPAEDQALLDAYSRAVIDVVDRIG
                     PAVVGLAVRAPTLSSSARNGRPERSHGGSGSGVVVAPDGLILTNSHVAGGTSAAARIA
                     VTTTDGQDLRARLVGDDPDTDLALIRIDEAVTLPAAPLGDSKRLKRGQLVIAIGNPLG
                     FESTVTTGVVSALGRSLRARTGRLIDDVIQTDAALNPGNSGGPLVSSRGEVVGINTAV
                     IMGAQGICFAVAANTASFVLGELVRHGRVRRAFIGISAQQTAIPARRRRAVGLVQESA
                     VMVATVESSSAADRAGLKPGDIVLRLDGEIITGADDLIRALTGERIGKSVALDVLRGF
                     ERLTLSLVPEERRRAA"
     gene            1720..>2603
                     /locus_tag="VNY79_11115"
     CDS             1720..>2603
                     /locus_tag="VNY79_11115"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018458263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HWX73043.1"
                     /translation="MSGVLHGIRVLDFGRYIAGPYCAALLADLGADVVRIERREGGED
                     RWVAPVAADGAGALYLAMNRNKRGMTLDPAHPQGREIVQKLVATADVVVANLPPEVLR
                     SLSLDLESLRRVKPDIILTTVTAFGAGGPWSHRHGFDGIGQLMSGAAYLTGTPEQPMR
                     AAVAWVDFGTASVSAFGTLAALIAKRETGRGQKVEAALLRTAVAFTNSALLEQQVIQV
                     NRVATQNRGQTSAPSDVFRTKDGWIIAYAIGNPMFRRWARLMGEEHWLTDPRFKDDQG
                     RGDHGDVISKRMAQWTTER"
BASE COUNT          465 a          810 c          896 g          432 t
ORIGIN      
        1 tccgcatggt ggctcccgac gcaacgtaga gcgctgcgtt taccgggtta accccatttc
       61 agatgaacgc cgacttaacg aaatttgttt ctgtggcggt ctaaagactg ccattgcagt
      121 aggcgagacg ccaacccccc cggggtggga gagtaccttg cggcgaaaag ggggataccc
      181 ggcgggggtg ccggcgcgag ttaaaagaag tctatgttta gaaatcaggc accttagtat
      241 gccaatttgt cggagaggga gccctccaac acgcttcagt gacctcgcag attaggctgc
      301 acgccgccgt tcctccggca cgagcgacag ggtcagccgc tcaaaccctc gcagcacatc
      361 aagcgcgacg ctcttaccaa tcctctcgcc ggtgagcgcg cggatgagat cgtccgcgcc
      421 ggtgatgatt tcaccgtcta gtctgaggac gatatcacct ggcttcaggc cggcgcggtc
      481 cgcggcgctg ctgctctcca ccgtcgcgac catcaccgcg ctttcctgca cgagtccgac
      541 cgcgcgccgc cgccgcgccg gaattgccgt ctgctgggct gagatgccga tgaacgcgcg
      601 acgcactcgg ccgtgtcgca cgagttcgcc gagcacgaag cttgcggtgt tggcggcgac
      661 cgcaaagcag atgccctgcg cgcccatgat cactgcagtg ttgatcccga ccacttcccc
      721 gcgcgaggac acgagcggcc cgccggagtt gccaggatta agtgcggcgt cggtctggat
      781 cacgtcgtcg atcaggcgcc cagtgcgtgc ccgcagagaa cggccgagcg cggagaccac
      841 gccggtcgtc accgtcgatt cgaagccgag cgggttgcca atggcgatca ctagttggcc
      901 gcgcttgagc cgcttggaat cgccgagcgg tgcggccggc aatgtcaccg cttcgtcgat
      961 gcggatgagg gcgagatcgg tgtccggatc gtcgccgact agacgggcgc gcaggtcctg
     1021 gccgtcagtt gtagtgacgg cgatgcgtgc agccgcacta gtgccaccgg ccacatgact
     1081 gttggtgagg ataaggccgt cgggcgccac caccacgcca gagcccgagc cgccgtgcga
     1141 gcgctccggg cggccgttgc gtgcggacga ggagagcgtc ggggcgcgca cggcaaggcc
     1201 taccacagcc gggccgatcc ggtcgaccac atcgatcacg gcgcgcgagt aggcgtcgag
     1261 gagagcttga tcctcggcgg gaacggaaga aacggatttg ggagccgagc tatcctctcg
     1321 tagacgggca ttcagaggga cgattttcac agaatttacc ttgttggcca gcatctcgca
     1381 gtcgcgcgag ccggggtgca caatatggga actccagagc agctggagta ggctcgcggc
     1441 ggggtatgac ggtcgttgtg gattagccac aggttcggag gcgtgtctcg gcatctctcg
     1501 gtctttgaga ttgatcacca attcgaactt ggtcggccgt tcgaccggga tgtcggcggg
     1561 cttgacgcgg catagctgga cgagtgtctg gctaatattt ctcgccggcc gccatccggc
     1621 gttctggtga cgcagccccc cggccgtaaa ctcatatcaa cgccagaaaa gggggtagac
     1681 ccgaaaagga gggtccacgt gaccgagacg cagagcgcgc tgagcggtgt gcttcatggc
     1741 atccgggtcc tcgatttcgg ccggtacatc gcggggccct actgcgccgc gctgctggcc
     1801 gacctcggcg cggacgtggt ccgcatcgag cggcgcgagg gcggcgagga ccgctgggta
     1861 gcgccggtcg ccgcagacgg cgcgggcgcg ctgtacctgg cgatgaaccg gaacaagcgc
     1921 ggcatgacgc tggaccccgc gcacccgcag ggtcgagaga tcgtgcagaa gctggtggcg
     1981 accgcggacg tcgtggtcgc gaatcttccg ccggaagtgc tgcgctcgct gtcgctcgac
     2041 ctcgagagcc tccgccgggt gaagcccgac atcatcctca cgaccgtcac ggcgttcggc
     2101 gccggcggac cgtggagtca tcgccacggc ttcgacggga tcggacagct catgtccggc
     2161 gccgcgtatc tcactggaac gccggagcag ccgatgcgcg cggcggtcgc gtgggtcgac
     2221 ttcggcacgg cctcggtctc cgcgttcggc acactggcgg cgctgatcgc gaaacgcgag
     2281 accgggcgcg gacagaaagt cgaagcggcg ctgctgcgca cggcggtggc gttcacgaac
     2341 tctgcgttgc tcgagcagca ggtgatccag gtgaaccgtg tcgcaacaca gaaccgtggt
     2401 cagacgtcag cgccgtcgga cgtgttccgc acgaaggacg ggtggatcat cgcctacgca
     2461 atcggcaacc cgatgttccg ccgatgggcg aggctgatgg gcgaggagca ctggctcacc
     2521 gatccgcggt tcaaggacga tcagggacgc ggcgatcacg gcgacgtcat ctcgaagcgg
     2581 atggcccagt ggacgaccga gcg
//
LOCUS       DATMQB010000391        12772 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4196019, whole genome shotgun sequence.
ACCESSION   DATMQB010000391 DATMQB010000000
VERSION     DATMQB010000391.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 12772)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12772)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12772
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4196019"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..329)
                     /locus_tag="VNY79_11120"
     CDS             complement(<1..329)
                     /locus_tag="VNY79_11120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006018871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nickel transporter"
                     /protein_id="HWX73044.1"
                     /translation="MPLTREGSAQVVRRLALVAVIAVLLLMSSALASWFSDAWAQAGP
                     FGDIRGQQASGFAGWLLAKQATFYRALAGLIRAAKTDGSAYWGLMGISFVYGIFHAAG
                     PGHGKAV"
     gene            complement(320..973)
                     /locus_tag="VNY79_11125"
     CDS             complement(320..973)
                     /locus_tag="VNY79_11125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1007 family protein"
                     /protein_id="HWX73045.1"
                     /translation="MIYRFIPFFAVLACLGGVTGRADAHPHVWVTMTEELLYAPDGSV
                     TGVRHAWTFDDMFSAFATQGIDHKTKDTFTRDELAPLAKVNVESLKEYAYFTYAKVNG
                     KRDKDAFDEPVDYWLDFDPKDAVLTLHFTLPFKKPVKTPALDLEIFDPQFFIDFGLAQ
                     KDPVRLVSAPAQCTTSVEKPHDDNFPATQRFDPSLMTSEANIGMGASFSNRISVTCR"
     gene            complement(1079..2665)
                     /locus_tag="VNY79_11130"
     CDS             complement(1079..2665)
                     /locus_tag="VNY79_11130"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HWX73046.1"
                     /translation="MNLHSAGHRRGAVCAPHYGAVEAGRSILAEGGNAIEAMLAMCAA
                     IAAVYPHMNHVGGDGFWLIHEPSGRVRAIMAAGPAGFEARPEFYREHETIPTRGPLAA
                     LTVPGAVGGWMLALEAAAANGGRLPLGVLLAPAIGHARSGYKVSRSQAQLAEEKLSEL
                     ESVPGFAKTFLIGGKAPTVDTSMRQGVFADTLAHLARAGLDDFYRGDVGREIAADLAR
                     IGSPLTHDDLTRYHATVAEPLQVQLPSGTVYNTDAPTQGIASLMILALFARLGVTKAE
                     SFNHIHGLVEATKRALRARDRVVTDPDHLPHALDRYLDQRFLAGEVMKIGRKAARWPL
                     TQDAGDTVWMGAADRSGLVVSCIQSLYWEFGSGCVLPRTGVLMQNRGISFSLTRGALN
                     LLTPGRLPFHTLNPALAVLNDGRVMAYGAMGGDGQPQTQAAVFTRHVDFQVPLGEAID
                     RPRWVLGRTWGKQRTTLRMESRFDGDLIDTLEVAGHAIDILPEPYSDVMGHAGAAVLH
                     SDGTSEAAHDPRADGGAAGV"
     gene            complement(2671..4740)
                     /locus_tag="VNY79_11135"
     CDS             complement(2671..4740)
                     /locus_tag="VNY79_11135"
                     /EC_number="3.4.24.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family metallopeptidase"
                     /protein_id="HWX73047.1"
                     /translation="MTDPDRSANPFFQTWTTPDGAPPFDRIRPEHFREAYARAFAEHD
                     AEVAAIAAQPEPPDFANTIAALELSGRLLERVGSAFYLLVGAHSDAALLEIEREIAPQ
                     LARHWNRINTNEELFRRIDALMRGADGLDFDAEQKRVLERYHVTFRRAGAALGTASRA
                     RLIEIMERLATLGTAFSQHVLADEQAFALQLTDEAELTGLPAFMRETMKGEARERGTA
                     GHVVTLSRSSALPFLQFSTRRDLREKVFRAFVSRGDNNGPTDNKAIIAEMVELRAERA
                     RLLGYADFAQYRLDDAMAKTPAAVRDLLQTVWAPARERALADREALQALVQEEGGNFA
                     LAPWDWRYYAEKLRQRRCDFDEAAIKPYFTLDRMIEAAFFAAERLFGLRVEERTDVPA
                     WHPDVRVFEVRGSDGSPIGLFFGDYFARPSKRSGAWMTSLRDQEKLAGDIRPLVVNVC
                     NFNKGSGGEPTLLSFEDARTLFHEFGHALHGLLSAVTYPKISGTNVAADFVELPSQLY
                     EHWLEQPDVLRRFARHYRTGVPMPEDLLRRLIAARNFDQGFATVEYVASAMADLDLHA
                     LSSPGAIDATAFEREALSRIAMPEEIAMRHRLPHFGHIFAGDAYAAAYYSYMWSEVLD
                     ADAFAAFEETGDIFDPATAKRLRETIYAAGGARDPAEAYKAFRGRLPSPQALLRKRGF
                     AETAVAH"
     gene            4818..5774
                     /locus_tag="VNY79_11140"
     CDS             4818..5774
                     /locus_tag="VNY79_11140"
                     /EC_number="4.1.3.3"
                     /EC_number="4.2.1.41"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010909834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0009436 - glyoxylate catabolic process
                     [Evidence IEA];
                     GO_process: GO:0071704 - organic substance metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrodipicolinate synthase family protein"
                     /protein_id="HWX73048.1"
                     /translation="MSRHADYLPHGVIPAVLLPFADDLAIDEKSFRKHLREVAATPNL
                     SAITVNAHSTEVASCSFEEQRRVLDIARDEIGVRLPIVNGVWADGSLEAARIARMAED
                     GGASALLVFPPAPFTLGQSPAMAVEHFRRIADASGLPIIAFQYPLATGQGYPRETLLK
                     MIEEVPTIRAIKDWSGNVPQHERHIRELQGLDPPVDVLTTHSAWLLSSLVLGCNGLLS
                     GSGSVIPDLQAAMFEAVKAGDLATARRINDRIYPLARVFYAEPWADMHNRMKEALVLL
                     GRLPRAVVRPPLVKLGGAELARIRAALIEAGLLSDKAARSAA"
     gene            5893..6150
                     /locus_tag="VNY79_11145"
     CDS             5893..6150
                     /locus_tag="VNY79_11145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011511799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73049.1"
                     /translation="MNRPQPPRRRRVLWQNVLTVVSAAILISAEVFGAAFAGSWAIAN
                     LLALGPIGAHALDAVFVLCGIIVMVQFVRAAQRVEPFTATD"
     gene            6643..7773
                     /locus_tag="VNY79_11150"
     CDS             6643..7773
                     /locus_tag="VNY79_11150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011443413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III PLP-dependent enzyme"
                     /protein_id="HWX73050.1"
                     /translation="MTARIREFLKQRSNDGPCLVVDLDVVRENYSSFAKALPDSKVFY
                     AVKANPAPEILKLLAGLGCCFDVASVSETEAALAAGATPERISYGNTIKKETEIAIAF
                     GLGVTLFAVDCEAEVEKVARAAPGSRVICRIHCDGSGSEWPLSRKFGCEPAYAADILE
                     LAHRRGLVPHGISFHVGSQQHNIEAWDRALASTAAVFRTCAERGIALAIVNLGGGFPA
                     RYVRKTPKLESYGKAIFRSLRKHFGNAIPETIVEPGRGLVGNAGMIEAEVVLIAKRSP
                     EDEVRWVYLDIGKFHGLAETIDESIRYPIRTAKDRDDTAPCVIAGPTCDSVDVLYEKT
                     PYPLPVSLAIGDKVLIEATGAYTATYSSVGFNGYPPLRQYVI"
     gene            complement(7777..8781)
                     /locus_tag="VNY79_11155"
     CDS             complement(7777..8781)
                     /locus_tag="VNY79_11155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013913357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="WD40 repeat domain-containing protein"
                     /protein_id="HWX73051.1"
                     /translation="MSESRNDTVSLAERARRVAAEAPVVAAHFLGRTAVFVLGDEALL
                     MVEPQGDPRRVAVHAGAILATAADGARFVSGGDDGKVVETNAVGESRTLATDPKRRWI
                     DHVALGPDGAVAWSAGKTAFAQSKDLREFEAPSTVGGLAFLPKGFRLAVAHYNGATLW
                     FPNAPQAAPEMLEWKGSHLGATVSPDGRFLVTTMQEPMLHGWRLADRKHMRMSGYAAR
                     VTSLGWTSGGRWLATSGAPQLILWPFQTKDGPMGKEPRVLAPSQHRVEVVACHPKRDF
                     VAAGYADGLVLIVRIEDGAAILAKNPGEAPASALAWSADGMLLAFGTENGEAGVIDLA
                     "
     gene            complement(8896..9936)
                     /locus_tag="VNY79_11160"
     CDS             complement(8896..9936)
                     /locus_tag="VNY79_11160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HWX73052.1"
                     /translation="MSAPPSSDKIPVTVLTGYLGAGKTTLLNRILSEPHGKKYAVVVN
                     EFGEIGIDNDLVVGVDEEVFEMNNGCICCTVRGDLVRILDGLMRRKGKFDGIIVETTG
                     LADPAPVAQTFFVDENVGRKTRLDAVVTVADAKWLKDRLQDAPEAKNQIAFADVILIN
                     KTDLVSAAELDEVEARIRGINRYAKVHRTERAQVPLNEVLSRNAFDLERILHLEPEFL
                     EGDGHDHDRGHGDGHDHGPHHHGGLKHYHDEEMQSISLKSDRPLDADKFFPWVQDLVQ
                     KEGPNILRCKGILSFKNDDERFVFQGVHMILDGDHQRPWQDGEPRESRIVFIGRKLPE
                     EKIRGGFESCIA"
     gene            complement(10002..10916)
                     /locus_tag="VNY79_11165"
     CDS             complement(10002..10916)
                     /locus_tag="VNY79_11165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013500811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HWX73053.1"
                     /translation="MRRWNTRRVLLVAGLAAALFTVPAAAQDATRISAVATFSILGDL
                     VKNVGGDRVDVVTLVGPDGDAHVYSPTPGDARKLAAAKIVFVNGLGLEGWMTRLIEAS
                     GTRSPIVTVTNGITARKMEDEGEPGRLVIDPHAWQSVANAKIYVANIRDGFAAIDPAG
                     KAIYDANAAAYLGKLDQLEKEVGATIAGIPADRRKVITTHDSLGYFGDAFGVKFISPE
                     RVSTDSEASARDVAKIIAQIRREKIPAVFMENITDPRLMREIARETGAATGGTLYSDA
                     LSAPGGPAATYIEMMRHNVRELIKALVG"
     gene            complement(10936..11805)
                     /locus_tag="VNY79_11170"
     CDS             complement(10936..11805)
                     /locus_tag="VNY79_11170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002714601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0043190 - ATP-binding cassette (ABC)
                     transporter complex [Evidence IEA];
                     GO_process: GO:0030001 - metal ion transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HWX73054.1"
                     /translation="MLYALLIAPFADFEFMRRALVGVLALALGAPPVGVFLMLRRMSL
                     IGDAMAHAILPGAAIGFLLAGLSLFAMAGGGLIAGFVIAVGAGLIARATTLKEDASLA
                     AFFLISLALGVTIVSVKGTNVDLLHFLFGSVLAVDDPTLILIVSIASVSLIVLALIWR
                     PLVLECVDPGYLRSVSRAGGPAHIAFLALVVMNLVGGFQALGTLLAVGIMMLPAIIAR
                     FWARDITIMIAVAVGAAALCGYAGLLVSYHANLPSGPAIILTAGALYAVSVAVGPVGG
                     LIWLALPRRHLEA"
     gene            complement(11851..12591)
                     /locus_tag="VNY79_11175"
     CDS             complement(11851..12591)
                     /locus_tag="VNY79_11175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HWX73055.1"
                     /translation="MTGLRFHNLTLGYERHPAVHHLDGAVESGSMVAVVGPNGAGKST
                     LFKGIVGTLKPLAGSIERDGLDARDIAYLPQAAEIDRSFPISLYDMVAMGLWRTKGAF
                     GGIGGKDHQAIEAAIAAVGLTGFEQRAIGTLSGGQMQRMLFARLLLQDARAIVLDEPF
                     TAIDAKTSADLVALVQRWHSERRTILVASHDLDLVKATFPQTLLLAREPVAWGPTAEV
                     LTADNLLKARRMCEAFDEDAEACVVAAE"
BASE COUNT         2136 a         4185 c         4347 g         2104 t
ORIGIN      
        1 atcaccgctt tgccgtggcc gggaccggcg gcatggaaaa ttccgtacac gaaagagatg
       61 cccatcagtc cccaataggc cgaaccgtcg gtcttggcag cgcggatgag gccggccagg
      121 gcgcggtaga acgttgcctg cttggccagg agccagccgg cgaagccgga agcttgctgt
      181 cctcgaatgt cgccgaacgg cccggcctgc gcccaggcgt cggagaacca gctcgccagc
      241 gcgctcgaca ttaggagcaa gaccgcgatc accgctacca gcgccagccg gcgaaccact
      301 tgcgccgaac cctcgcgcgt cagcggcaag tcactgaaat cctgttggag aaacttgcgc
      361 ccatgccgat gttggcttcc gaagtcatca gcgacggatc gaagcgctgc gtcgccggga
      421 aattgtcgtc atgcggcttc tcgaccgagg tcgtgcattg cgcgggagcg ctcacgagcc
      481 gcaccgggtc tttttgggcg aggccgaagt cgatgaagaa ttgcgggtcg aagatttcga
      541 ggtcgagtgc cggtgttttg accggcttct tgaacggtag cgtgaagtgc agcgtgagca
      601 ccgcatcctt cggatcaaag tcgagccagt agtcgaccgg ttcgtcgaac gcgtccttgt
      661 cgcgtttccc attcaccttg gcgtaggtga agtaggcata ttccttgagc gactcgacat
      721 tgaccttggc gagcggcgcg agctcgtcgc gcgtgaaagt gtccttggtt ttgtgatcga
      781 tcccctgcgt ggcgaaggcg gagaacatgt catcgaaggt ccaggcgtgg cgcacgccgg
      841 taaccgagcc gtccggggcg tacagaagct cttcggtcat cgtcacccac acatgcgggt
      901 gcgcgtcggc gcggcccgtc accccgccga ggcaggccag aaccgcgaag aaaggaatga
      961 agcgataaat cattcgcgcc tgcctactgt cgccgccgat gctctcatct tccctttgga
     1021 gtagggccga aacgaggctt gcgcataggc tatcaaaaag gaattgcagc cgtctgcgtc
     1081 acacgccggc ggcgccgccg tcggcgcgcg gatcgtgggc ggcttcggag gtgccgtcgc
     1141 tgtgcagcac cgcggccccc gcgtgcccca tgacgtcgga gtagggttcg ggcagaatgt
     1201 cgatggcgtg gccggcgact tccagcgtgt cgatgagatc gccgtcgaag cgcgattcca
     1261 tccgcaatgt ggttcgctgt ttgccccagg tccgcccgag cacccagcgc ggtcggtcga
     1321 tcgcttcgcc gagcggcacc tggaagtcga catggcgcgt gaacacggcg gcctgcgtct
     1381 gcggctgccc gtcgccgccc atggcgccgt aggccatgac gcgtccgtcg ttgagcacgg
     1441 cgagcgccgg attgagcgtg tggaacggca atcggcccgg ggtgaggaga ttgagggcgc
     1501 cgcgggtgag cgaaaagctg atgccgcggt tctgcatcag cacgccggtg cgcggcagca
     1561 cgcagccgga gccgaattcc caatagagcg actggatgca ggagacgacg aggccgctcc
     1621 tgtccgcggc gcccatccac acggtgtcgc cggcatcctg ggtgagcggc caccgcgccg
     1681 ccttgcggcc gatcttcatc acctcgccgg cgaggaaccg ctgatcgaga tagcggtcga
     1741 gcgcgtgggg caggtgatcg ggatcggtga cgacccggtc acgcgcccgc agggcgcgct
     1801 tcgtcgcctc gaccaggccg tggatgtggt tgaagctttc cgccttggtg acgcccagac
     1861 gggcaaacag cgcgaggatc atcagcgaag cgatgccctg ggtcggcgca tcggtgttgt
     1921 agaccgtgcc cgagggcagc tggacctgga gcggttcggc gacggtggcg tgatagcgtg
     1981 tcagatcgtc gtgcgtgagc gggctgccga tccgcgccaa atcggccgcg atttcacgcc
     2041 cgacatcgcc ccggtagaaa tcgtcgagac cggcgcgggc gaggtgagcg agggtgtcgg
     2101 cgaacacccc ctgccgcatg gacgtgtcga cggtcggcgc cttgccgccg atcaggaacg
     2161 ttttggcgaa ccccggcacg ctttcgagct ctgacagctt ttcctcggcg agctgcgcct
     2221 ggctgcgcga gactttgtag ccgctgcgcg cgtggccgat ggcgggggcg agcaacacgc
     2281 cgagcggcag cctgccgcca ttggcggccg cggcttcgag cgccagcatc cagccgccga
     2341 cggcgcccgg cacggtgagc gccgcgagcg gtccgcgcgt cggaatcgtt tcgtgctcgc
     2401 gatagaactc gggccgcgcc tcgaaaccgg cggggccggc cgccatgatc gcgcgcacgc
     2461 gcccggaagg ctcgtggatg agccagaacc catcgccgcc gacgtgattc atgtgcggat
     2521 agaccgcggc gatcgcggcg cacatcgcca gcatcgcttc gatcgcattg ccgccttcgg
     2581 cgagaatcga gcggccggct tctacggcgc cgtagtgcgg cgcgcagacg gcgccgcggc
     2641 ggtggccagc gctgtgcagg ttcatgtcgg tcaatgtgcc acggcagttt cggcaaatcc
     2701 acgcttgcgc agcagcgctt gcgggctggg caaccggccg cgaaaggcct tgtaggcctc
     2761 ggccggatcg cgggctccgc cggcggcgta gatcgtctcg cgcaggcgct tcgccgtggc
     2821 cggatcgaag atgtcgccgg tctcctcgaa tgccgcgaaa gcgtcggcat cgagtacttc
     2881 cgaccacatg tagctgtagt aggccgccgc ataggcgtcg ccggcgaaga tatgcccgaa
     2941 gtggggcagc cggtggcgca tggcgatttc ctccggcatg gcgatgcgcg acagcgcctc
     3001 tcgctcgaag gcggtggcgt cgatcgcacc cggcgaggaa agcgcatgca ggtcgagatc
     3061 ggccatggcc gaggcgacat actcgaccgt ggcgaagccc tggtcgaagt tgcgcgccgc
     3121 aatgaggcgc cgcagcaggt cctcgggcat cggcacgccg gtccggtagt gccgggcaaa
     3181 gcgccgcagc acgtccggct gttcgagcca atgctcgtaa agctgcgagg gcagctcgac
     3241 gaagtcggcg gcgacgttgg tcccggaaat cttcggatag gtgaccgcgg acaggaggcc
     3301 gtgcaacgca tggccaaatt catggaacag cgtgcgcgcg tcctcgaagc tgagcagtgt
     3361 cggctcgccg ccactgcctt tgttgaagtt gcagacgttg accactagcg gccggatgtc
     3421 gccggcgagc ttttcctgat cgcgcagcga ggtcatccag gcgccgctgc gtttcgacgg
     3481 gcgcgcgaaa tagtcgccga agaacaggcc gattgggctg ccgtccgagc cgcgcacctc
     3541 gaacacgcgc acgtccgggt gccaggccgg aacatccgtg cgctcctcga cccgcaagcc
     3601 gaacagccgc tcggcggcaa agaacgcagc ctcgatcatc cggtcgagcg tgaaataggg
     3661 cttgatcgcg gcttcatcga aatcgcagcg gcgctggcgc agcttttccg catagtagcg
     3721 ccagtcccat ggcgcgaggg cgaagttgcc gccctcctcc tgcaccagcg cctgcaaggc
     3781 ttcgcgatcg gcgagcgcgc gctcgcgcgc gggcgcccac accgtctgca aaaggtcgcg
     3841 cactgcggcc ggcgttttcg ccatcgcatc gtcgagccgg tattgggcga aatcggcata
     3901 gccgagcagc cgcgcgcgct cggcgcgaag ctccaccatc tcggcgatga tcgccttgtt
     3961 gtcggtcggg ccgttgttgt cgccgcggga gacgaaagcg cggaagactt tctcgcgaag
     4021 gtcgcgccgg gtggagaact ggaggaaggg cagggcgctc gagcgcgaca gcgtgacgac
     4081 gtggccggca gtgccgcgct cccgcgcttc acctttcatg gtttcgcgca tgaatgcggg
     4141 caggccggta agctccgcct cgtcggtgag ctgcagcgcg aaggcttgct cgtcggcgag
     4201 gacgtgctgg ctgaacgcgg tgccgagtgt cgccaggcgc tccatgattt cgataagccg
     4261 cgctcgcgac gcggtgccga gcgcggcgcc ggcccgccgg aaggtcacat gatagcgctc
     4321 cagcacgcgc ttctgttcgg cgtcgaaatc gagcccgtcg gccccgcgca tgagcgcgtc
     4381 gatgcggcgg aacagttctt cgttggtgtt gatccggttc cagtggcgag ccaactgcgg
     4441 cgcgatctcg cgctcgatct cgagcagcgc ggcgtcgctg tgggcgccga cgagcaggta
     4501 gaaggcggag cccacccgct ccagcagccg cccgctcaac tcaagggcgg cgatcgtgtt
     4561 ggcgaaatcc ggcggctcgg gctgcgccgc aatggccgcg acctcggcgt cgtgctcggc
     4621 gaaggcgcgc gcgtaagcct cccggaaatg ctcgggtctt atgcggtcga acggcggcgc
     4681 cccgtcgggg gtcgtccagg tttggaagaa tgggttggcg gatcgatcag gatcagtcat
     4741 cgggaggtca tgccacaggc cggagcagcg tgatataggt catcgggcgt gcgcgccaca
     4801 gcgcaaggaa ggtcaaaatg tcccgacacg ccgactatct gccgcacggc gtcattccgg
     4861 ccgtcctgtt gccgtttgcc gacgatctcg ccatcgatga gaagagcttc cgcaagcatc
     4921 tgcgcgaggt cgcggcgacg ccgaaccttt ccgccatcac cgtcaatgcc cactcgacgg
     4981 aagtcgcttc atgcagcttc gaggaacagc ggcgcgtcct cgatattgcg cgcgacgaga
     5041 tcggcgtccg gctgccgatc gtcaacggcg tgtgggccga cggcagcctc gaagccgcgc
     5101 gcatcgcccg catggcagag gatggcgggg cctcggcgct cctggtgttt ccgccggcgc
     5161 cgttcacgct cggacaatcg ccggccatgg cggtggagca tttccggcgg atcgccgacg
     5221 ccagcggcct gccgatcatc gccttccagt atccgctggc caccggccag ggctatccgc
     5281 gcgaaacgct cctcaagatg atcgaggagg tgccgaccat ccgcgccatc aaggactggt
     5341 cgggcaatgt gccgcagcac gagaggcaca tccgcgagct tcagggcctc gatccgccgg
     5401 tcgacgtgct cacgacccac agcgcctggc tcctttcctc gcttgttctc ggctgcaacg
     5461 gcctcctctc cggcagcggc agcgtgatcc ccgaccttca ggccgccatg ttcgaagcgg
     5521 tgaaggccgg cgatctcgcg accgcgcggc ggatcaacga ccgcatctat ccgctcgcgc
     5581 gcgtgttcta tgccgagccc tgggcggaca tgcacaaccg catgaaggag gcgctggttc
     5641 tgcttggccg cctgccgcgg gccgtggtgc gcccgccgct ggtaaagctc ggcggcgccg
     5701 agctcgcccg catccgcgcc gcgttgatcg aggcgggcct gctgtcggac aaggccgcgc
     5761 gatcggcggc gtgaggttac atttttatct ctcccgttcc tgggagaggt cggcacgcga
     5821 agcgtgccgg gtgagggcaa gcggcctcaa gcggccttga tctcgccgcc gctttcgcgc
     5881 aatggaaacg ccatgaacag gccgcaaccg ccgcgccgcc ggcgcgtgct ctggcagaac
     5941 gtgctgaccg tcgtcagcgc ggcaatcctg atcagcgccg aagtcttcgg cgcggccttc
     6001 gccggcagct gggcgatcgc caacctgctc gcgctcgggc cgatcggcgc ccacgcgctc
     6061 gacgccgtct tcgtgctctg cggcatcatc gtcatggtgc aattcgtgcg cgccgcgcag
     6121 cgcgtcgagc cgttcacggc gacggactga gtgtttgccc gcgccgcttg gcgacgacgc
     6181 tcgaaaaaaa tccgcccctt actttttgtt aagagcaaaa cgcttgcacc gcgcggctga
     6241 atggcttatt tgcggaatgc ccaatttcgc acgtgcctgt ggccgtgtgt cggtcggtgg
     6301 gcatccggac aagaggccgg acagccgcct aaggaagaga cgctacttcc ttgctcccgc
     6361 gaccggcagc cggaggcgaa accggcatag cccgctctcc acgggcgacg cggcttaaag
     6421 caacgacgga agggcttttt tggttcgcta ccggcgccaa tgccggggga caccgaaagg
     6481 gcttgtcctt ctttgccagc agtgcggaac gggatctccc tcatccggac caaggcagca
     6541 atcacggcga tgcaataggc tccgcaacgg tgcggagccg cgcgcgtcgc aggaggttca
     6601 ccttggcggc tacgccgcct gacggatcag ggagtggtgg cgatgaccgc acgcatccgc
     6661 gaatttctca agcagcgcag caatgacggg ccttgtctgg tggtcgacct cgacgtggtc
     6721 cgtgagaact attccagctt cgccaaggcg ctgcccgaca gcaaagtgtt ctacgccgta
     6781 aaggccaacc cggcgccgga aatcctcaag ctgttggcgg ggctcggctg ctgcttcgac
     6841 gtcgcctcag tgagcgagac ggaagccgcg ctggctgcgg gcgcgacgcc cgagcgcatc
     6901 tcttacggca acaccatcaa gaaggagacc gagatcgcca tcgccttcgg gctcggcgtc
     6961 acgctctttg ccgtcgattg cgaggcggaa gtggagaaag tcgcgcgcgc cgcgcccggc
     7021 agccgggtga tctgccgtat ccattgcgac ggctccggct ccgaatggcc gctgtcgcgc
     7081 aagttcggct gcgagccggc ctatgccgcc gacatcctcg aactcgcaca ccggcgcggg
     7141 ctggtgccgc acggcatctc gtttcacgtc ggctcgcagc agcacaacat cgaagcctgg
     7201 gaccgggcgc tcgcctcgac cgcggcggtg ttccgcacct gcgccgagcg cgggatcgcg
     7261 ctcgccatcg tcaatctcgg cggcggcttc ccggcccgct atgtgcgcaa gacgccgaag
     7321 ctcgaatcct acggcaaggc gatcttccgc tcgctgcgca agcacttcgg caacgcgatt
     7381 ccggagacga tcgtggagcc gggccgcggc ctcgtcggca acgccggcat gatcgaggcc
     7441 gaggtggtgc tgatcgccaa gcgctcgccg gaagacgagg tgcgttgggt ctatctcgat
     7501 atcggcaagt ttcacgggct tgccgagacg atcgacgaat cgatccgtta cccgatccgc
     7561 accgccaagg atcgcgacga cacggcgccc tgcgtcatcg ccggcccgac ctgcgactcg
     7621 gtcgacgtgc tctacgagaa gacgccgtat ccgttgccgg tctcgctggc gatcggcgac
     7681 aaggttttga tcgaggccac cggcgcctac accgcgacct actcgtcggt cggcttcaac
     7741 ggctatccgc cgctgcggca atacgtgatc tgaacatcag gcgaggtcga tcaccccggc
     7801 ctcgccgttc tccgtgccga acgcgagcaa catgccgtcg gcgctccagg cgagcgcgct
     7861 ggcgggcgcc tcgcccggat ttttggccaa gatcgcggcg ccgtcctcga tgcgcacaat
     7921 gagcaccaag ccgtcggcgt agccggcggc gacgaagtcc cgcttcgggt ggcaggcgac
     7981 gacctcgaca cggtgctgcg acggcgctaa tacgcgcggc tccttgccca tcggcccgtc
     8041 tttcgtctgg aacggccaga ggatgagctg cggcgcgccg gaggtcgcga gccagcggcc
     8101 gccggaggtc cagccaagcg aggtcacccg cgccgcatag cccgacatgc gcatgtgctt
     8161 gcggtcggcg aggcgccaac cgtgcagcat cggctcctgc atggtcgtga ccagaaagcg
     8221 gccgtcggga ctgactgtcg cgccgagatg cgagcccttc cattcgagca tttccggcgc
     8281 cgcctgcggc gcattcggaa accacagcgt tgccccgttg tagtgcgcca ccgctagccg
     8341 aaagcccttc ggcagaaagg cgaggccgcc gacggtcgag ggcgcctcga attcgcgcaa
     8401 gtccttcgac tgcgcgaagg ccgtcttgcc ggccgaccag gcgacggcgc cgtccgggcc
     8461 gagcgcgacg tgatcgatcc agcgccgctt cgggtcagtg gcgagcgtgc ggctctcgcc
     8521 tacggcattc gtctccacca ctttgccatc gtcgccgccg ctgacgaagc gcgcaccgtc
     8581 ggccgccgtg gcgaggatcg cgccagcgtg cacggcaacg cgccgcgggt cgccttgcgg
     8641 ctcgaccatc agcagcgcct catcgccgag cacgaacacc gccgtgcggc cgagaaaatg
     8701 cgcggcgacc accggcgcct cggcggcgac gcggcgcgcg cgttcggcga gggagacggt
     8761 gtcgttgcgg ctctcagaca tggagcgcta cgcaatggca agcgttggtg ccggactcga
     8821 tccggcaatt catgggccgc cgcgcccggt ggaggcgccc gtcaaggccg cggatgacga
     8881 gccaggcggc ggtgatcaag cgatacaact ttcaaaaccg ccgcggatct tctcctcggg
     8941 cagtttgcga ccgatgaaca cgatgcggct ctcgcgcggc tcgccgtcct gccacggccg
     9001 ctggtgatcg ccgtcgagga tcatgtgcac gccctggaag acgaaccgtt cgtcatcgtt
     9061 cttgaaggaa aggatgccct tgcagcgcag gatgttcggg ccttccttct gcaccaggtc
     9121 ctgcacccag ggaaagaact tgtcggcatc cagcggcctg tcgctcttga gcgaaatcga
     9181 ttgcatctcc tcgtcgtggt agtgcttgag gccgccgtga tgatggggcc catgatcgtg
     9241 gccgtcgccg tggccgcgat catggtcgtg gccatcgccc tcgaggaatt caggctccag
     9301 atgcaggatg cgctcgagat cgaatgcatt gcggctgagc acttcgttga gcggcacctg
     9361 cgcccgctcg gtcctgtgca ccttggcgta gcggttgatg ccgcggatgc gcgcctcgac
     9421 ctcgtcaagc tccgccgctg ataccagatc ggtcttgttg atcaggatca cgtcggcgaa
     9481 ggcgatctgg ttcttggctt cgggggcgtc ctgcaggcgg tccttgagcc atttggcgtc
     9541 ggcgacggtg accacggcgt cgagccgcgt cttgcggccg acgttctcgt cgacgaagaa
     9601 cgtctgcgcc accggcgccg gatcggcgag ccctgtggtc tcgacaatga ttccgtcgaa
     9661 cttgcccttg cggcgcatga ggccgtcgag aatgcgcacc aggtcgccgc gcacggtgca
     9721 gcagatgcag ccgttgttca tttcgaacac ctcctcgtcg acgccgacga cgaggtcgtt
     9781 gtcgatgccg atctcgccga attcgttgac cacgacggcg tatttcttgc cgtgcggctc
     9841 ggagaggatg cggttgagca aggtggtctt gccggccccg aggtagccgg tgagcacggt
     9901 aaccgggatc ttgtcggacg acggcggtgc ggacatgagg gccctcctgc gcggctatat
     9961 aggcgatccc gcgccgcccc aaaacccgtt cgcccgaact gtcagccgac gagcgccttg
    10021 atcagttcgc gcacgttgtg gcgcatcatc tcgatgtaag tggccgcggg gccgcccggc
    10081 gcggacaagg cgtcggagta gagcgtgccg ccggtcgcgg cgcccgtttc gcgggcgatc
    10141 tcccgcatca gccgcggatc ggtgatgttc tccatgaata ctgcgggaat cttctccctc
    10201 ctgatctgcg caatgatctt ggccacgtct ctcgcggagg cctcggagtc ggtcgaaact
    10261 cgctccggcg agatgaactt aacgccaaag gcgtcgccga aatagccgag cgagtcgtgg
    10321 gtggtgatga ccttgcggcg gtcggccggg atgccggcga tcgttgcgcc cacctccttt
    10381 tccagctgat cgagcttgcc gagataggcc gccgcattgg cgtcgtagat cgcctttccg
    10441 gccgggtcga tcgcggcgaa gccgtcgcga atgttggcga cgtagatctt ggcgttggcc
    10501 accgactgcc aggcatgcgg atcgattacc aggcgtccgg gctcgccttc gtcctccatc
    10561 ttgcgcgcgg tgatcccgtt ggtgacggtg acgatcggcg accgggtgcc ggaggcctcg
    10621 atcaggcgcg tcatccagcc ttcgaggccc agtccgttga cgaagacgat cttggctgcc
    10681 gcgagcttcc tggcatcgcc cggggtcggc gaatagacat gggcgtcgcc gtccgggccg
    10741 accagcgtca cgacgtcaac gcggtcgccg ccgacgttct tcaccaagtc gccgaggatc
    10801 gaaaacgtcg ctacggcgct gatcctggtc gcgtcttgcg ccgccgcggg cacggtgaac
    10861 agcgcggcgg caagtccggc cacgaggagc acacgccgcg tgttccatct cctcatctga
    10921 tcccccgcgc gccggttacg cttccaggtg ccgacgcggc aaagcgagcc agatgagccc
    10981 gccaaccggt ccgacggcaa ccgagaccgc ataaagcgcc ccggcggtca ggatgatggc
    11041 cgggcccgac ggcagattgg cgtgatagga gacgagaagg ccggcatagc cgcacagcgc
    11101 ggcggctcca actgcgacgg cgatcatgat ggtgatgtca cgcgcccaga agcgggcgat
    11161 gatcgccggc agcatcatga tcccgaccgc gagcagggtg ccgagcgcct ggaagccgcc
    11221 gacaaggttc atgaccacga gcgccaggaa ggcgatgtgg gcgggcccgc cggcgcggct
    11281 caccgagcgc aggtagccgg gatcgacgca ttcgagcacc agcggccgcc agatcagcgc
    11341 cagcacgatg agcgagacgc tggcgatgct cacgatcagg atgagcgtcg gatcgtcgac
    11401 tgcgagcacc gaaccgaaca ggaagtgcag aagatcgaca ttggtgccct tgaccgagac
    11461 gatggttacg ccgagcgcca gcgaaatgag aaagaacgcg gcgagcgatg cgtcttcctt
    11521 gagcgtcgtt gcccgcgcaa tcaggccggc gccgaccgcg atgacgaagc ccgcgatcaa
    11581 tccgcctccg gccatcgcga acaggctcag cccggcgagg aggaagccga tggcggcgcc
    11641 gggcaggatg gcgtgcgcca tggcgtcgcc gatcaggctc atccgccgca acatcaggaa
    11701 aacgccgacc ggaggggcgc cgagcgcgag cgccagcacc ccgaccagcg cccggcgcat
    11761 gaattcgaag tcggcgaacg gggcgatgag gagggcgtag agcatgcggt ccgtttgcgc
    11821 cggtcgtcct cgcggcgagg aagagacaat ttactccgcc gcgaccacgc aggcttcggc
    11881 gtcttcgtca aaggcctcgc acatgcgccg cgccttcagg agattgtcgg cggtcagcac
    11941 ctcggcggtc ggtccccagg cgaccggctc gcgggcgagc agcagggtct gcggaaaagt
    12001 cgccttcacc agatcgaggt cgtgcgaggc gaccaggatc gtgcgccgct cgctgtgcca
    12061 gcgttgcacc agagccacca ggtcagcgga agtcttggcg tcgatggcgg tgaacggctc
    12121 gtcgagtacg atcgcccgcg cgtcctgcag cagcaggcgg gcaaacaaca tccgctgcat
    12181 ctgcccgcct gagagcgtgc cgatggcgcg ttgctcgaat ccggtgaggc cgaccgcggc
    12241 gatggccgct tcgatcgcct gatgatcctt gccgccgatg ccgccgaaag cgcccttggt
    12301 gcgccagagt cccatcgcca ccatgtcgta gaggctgatc gggaaagagc ggtcgatctc
    12361 ggctgcctgc ggcagatacg cgatgtcgcg cgcatcgagg ccgtcgcgct cgatgctgcc
    12421 ggcaagcggc ttcagcgttc cgacgatgcc cttgaacaga gtcgatttgc cggccccatt
    12481 cggcccgacc acggcgacca tcgagcccga ctccacggcg ccgtcgaggt ggtgcaccgc
    12541 cgggtgccgc tcgtagccga gggtgagatt gtggaagcgc aaccctgtca ttgccggcgc
    12601 ctcagcggag cgcccacagc gccatcagcc agatcagcgc cgcgagcgcg ccggcgatcc
    12661 cgagccgctg tgggaccgag atgcgcagca acgacggtgc gattgtcggc gagggatgga
    12721 cgtcatcggc gcgatggtga tggtggatca taatgtaaca atataacatt ac
//
LOCUS       DATMQB010000392         3255 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2337323, whole genome shotgun sequence.
ACCESSION   DATMQB010000392 DATMQB010000000
VERSION     DATMQB010000392.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3255)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3255)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3255
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2337323"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(153..848)
                     /locus_tag="VNY79_11180"
     CDS             complement(153..848)
                     /locus_tag="VNY79_11180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012590915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008236 - serine-type peptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolyl oligopeptidase family serine peptidase"
                     /protein_id="HWX73056.1"
                     /translation="MAVDLDGPRLAPRSGAARQLVVFLHGYGADGNDLIELGRAWQPL
                     LPQAAFVAPHAPEPCGQAPVGRQWFGLTFRDPNERWVGVNKAAPGLERFLDAELKRHT
                     LPPAALALVGFSQGTMMALHVGLRRAVPPAAIVGYSGLLVLPPEIEPDAFAAEIKSRP
                     PVLLVHGDSDDLIPVQALFQAAQGLAALGVPAEWHVSTGVGHGIDAEGLRHGGEFLAR
                     AFRRGADGGRLIP"
     gene            complement(838..1518)
                     /locus_tag="VNY79_11185"
     CDS             complement(838..1518)
                     /locus_tag="VNY79_11185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015596750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase 2 family
                     protein"
                     /protein_id="HWX73057.1"
                     /translation="MRPHIHTDSDLDAGLAALSRADPRFGPLMATAGRPPLRRRPDGF
                     AGLAAIIVAQQLSTASASAIWGRLAAAFDPLEHSALLRARPVRLARLGLSGPKIRALK
                     AIARSIESGELALAMLADLAPEAAHAALTAIHGIGPWTADIYLLSCLGHADAWPAGDL
                     ALQEAARVAFGLPSRPTAKEMQALAETWRPWRAVAARVLWTYYRTVKGREGAPLEQGR
                     AKRGKNGR"
     gene            1595..2470
                     /gene="gluQRS"
                     /locus_tag="VNY79_11190"
     CDS             1595..2470
                     /gene="gluQRS"
                     /locus_tag="VNY79_11190"
                     /EC_number="6.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004812 - aminoacyl-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006418 - tRNA aminoacylation for protein
                     translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA glutamyl-Q(34) synthetase GluQRS"
                     /protein_id="HWX73058.1"
                     /translation="MYTRVFRFAPSPNGYLHLGHAYSALLNHEMAQAAGGRLLLRIED
                     IDAERCRPEYEAAIYEDLQWLGVSWQQPARRQSEHLDDYAAALARLEGERLVYPSFES
                     RSEISALVAERDRHSRWPRDPDGVPIYPGRARMMPAAERNRRRSTGEPYAIRLAMDAA
                     VARAGAITWNETGLGPHSQTGVVTLAPQLWGDVVLARKDAPASYHLAVAVDDALQGVS
                     DVVRGQDLFWSTSIHRVLQALLGLPEPTYHHHRLILDADGRKLSKSTQATSLRELRGR
                     GTTAADIRRMVGLGH"
     gene            2543..>3255
                     /locus_tag="VNY79_11195"
     CDS             2543..>3255
                     /locus_tag="VNY79_11195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HWX73059.1"
                     /translation="MARSRSKAKSVAKAARRRSSRRAGAARAHEAALAAFAHDIRTAL
                     TGILALGELLASSTLGKNERSWAAGIKASAEHLASLTTLVLDAAKAETGSLTLREEVF
                     RPRRLVEFLVDSLATRAQAKGLAAEANIADNLPDLLVGDAVRLRAALENLIDNAVKFT
                     ERGAVRLEARASPAGRGLTRLVVAVHDSGIGLKPAEIKRLFRPFAQASAEIARHYGGS
                     GLGLAIVKRLAKLMGGDLTV"
BASE COUNT          538 a         1112 c         1118 g          487 t
ORIGIN      
        1 aaaatccgca ttgagaacca gggccggaaa gcccgaaggc gatacgtgag cgttcaagtc
       61 tgacgctccc acctcgactc gaatgccgca gtgcggcgct gggcgctagt ttataggcag
      121 gcgtgacagg attgtgaagc ccgctccgag agttatggga tgaggcggcc gccgtcggcg
      181 ccccgtcgaa aggcgcgcgc caggaattcg ccgccgtgtc gcaggccctc ggcgtcgatg
      241 ccgtggccga cgccggtgga cacatgccat tcggcaggca cgccgagcgc cgcgagcccc
      301 tgcgccgcct gaaagagagc ctgcaccgga atgaggtcgt cgctgtcgcc gtgcaccagc
      361 agcaccggcg ggcgcgattt gatctccgcg gcaaaggcgt caggctcgat ttccgggggc
      421 aggacgagca agcccgaata accgacgatc gccgccggcg gcaccgcgcg gcgcaaaccc
      481 acgtgcagtg ccatcatcgt gccttggctg aagccgacga gcgcgagcgc cgccggcggc
      541 agcgtgtggc gcttgagttc ggcatcgaga aagcgctcga gcccaggggc ggccttgttg
      601 acgccgaccc agcgctcgtt cggatcgcgg aaggtcaagc caaaccattg ccggccgacc
      661 ggcgcctgcc cgcacggctc cggcgcgtgc ggcgcgacga aggccgcctg cggcaacagc
      721 ggctgccaag cgcggccgag ttcgatgaga tcgttgccgt cagctccata gccgtggaga
      781 aacacgacca gctgtcgtgc ggctcccgag cgcggcgcca gccgcggacc gtcgagatca
      841 acggccattc ttccctctct tggctcttcc ttgctcgagc ggcgcgcctt cccgcccttt
      901 gaccgtgcga tagtaggtcc acaacacgcg cgccgccacg gcccgccacg gccgccatgt
      961 ttctgccaaa gcttgcatct ccttcgcagt cggccggctc ggcaaaccga aggccacgcg
     1021 cgccgcttcc tgaagggcaa gatcgcccgc cggccaggca tccgcatggc caaggcagga
     1081 gagaagataa atgtcagcag tccacgggcc gatgccgtga atcgcggtca gggcagcgtg
     1141 ggcggcctcg ggagcgagat cggccagcat ggcaagcgcc agctcgccgc tctcgatcga
     1201 gcgggcgatc gccttcagcg cgcggatctt tggccccgac agaccgagcc gcgccaaccg
     1261 caccggcctg gcgcgcagca gggcgctgtg ttcgagcgga tcgaacgcgg cggcgagtcg
     1321 tccccagatc gcgctcgcgc tcgcagtcga aagctgctgc gccacaatga tggcggcaag
     1381 cccggcgaaa ccgtcgggcc gccgtcgcag cggcgggcgt ccggccgtgg ccatgagtgg
     1441 gccgaagcgc ggatcagccc ggctcagtgc ggcgaggccg gcgtcgagat cgctgtcggt
     1501 atggatgtgg ggccgcatgg cctttgtcgc gatttgattg gttgaccgga gcctgtcagt
     1561 caacccggca gtgcaaacga acgattccgc gccgatgtac acccgcgtct tccgctttgc
     1621 accgagcccg aacggctatc tgcatctcgg ccacgcctac tcggcgctgc tcaaccacga
     1681 gatggcgcaa gcggccggcg gccggctgct gctgcgtatc gaagacatcg acgcggaacg
     1741 gtgccgcccg gaatacgagg cggcgatcta cgaggatctc cagtggctcg gtgtttcgtg
     1801 gcagcagccg gcacggcggc agagcgaaca cctcgacgat tacgccgccg cccttgccag
     1861 gctggaaggg gagaggctcg tctatccgag cttcgagagc cgcagcgaaa tcagcgcgct
     1921 tgtcgccgag cgcgaccggc acagccgctg gccgcgcgac ccggacggag tgccgatcta
     1981 tcccggacgg gcgcgcatga tgccggctgc cgaacgcaac cgccgccgca gcaccggcga
     2041 gccctacgcc atacggctcg cgatggacgc cgccgtggcc cgcgccggcg cgatcacctg
     2101 gaacgaaacc ggcctcggtc cgcacagcca gaccggtgtc gtcacccttg caccgcaatt
     2161 gtggggcgac gtggtgctcg cgcggaagga cgctccggcg agctatcatc tcgctgttgc
     2221 cgtggacgac gctttgcagg gtgtgagcga tgtcgtgcgc gggcaggatc ttttctggtc
     2281 gaccagcatc caccgcgtgc tgcaggcgct gctcggcctg cccgagccga cctaccatca
     2341 ccaccgcctc attctcgacg ccgacggtcg caagctgtcg aagtcgacgc aggcaacgag
     2401 cctgcgcgag ttgcgcgggc gcggcacgac ggcggcggat atcaggcgca tggtggggct
     2461 tggacactga gagaatatcc cttgagcttg ttttgttccg gcaaccgccg tggcatgctg
     2521 accgcggcgc ctggggggtg ccatggcgcg ttcgaggtcg aaagcgaagt ccgtggcgaa
     2581 ggcggcgcga cgccgctcgt cgcgccgtgc cggcgccgct cgcgctcacg aagcggcact
     2641 cgccgcattc gcgcacgaca tccgcaccgc gcttaccggc atcctggcgc tcggcgagtt
     2701 gctggcgagt tccactctcg gcaagaacga acggagctgg gctgccggca tcaaagcgag
     2761 cgccgagcat ctcgcctcgc tgacgacttt ggtccttgat gcagccaagg cggaaaccgg
     2821 ctcgctgacg ctgcgcgaag aagttttccg gccgcggcgg ctcgtcgaat ttctggtgga
     2881 ttcgctggcg acgcgcgcgc aggcgaaagg cctcgcggcg gaagcgaaca ttgccgacaa
     2941 cctgcccgac ctgctcgtcg gcgacgcggt gcggctgcgt gcggctctcg agaacctgat
     3001 cgacaacgcc gtcaagttca ccgagcgcgg cgctgtgcgg ctcgaggcgc gcgcctcgcc
     3061 ggccggacgc ggactcacgc ggcttgttgt cgcggtgcac gacagcggca tcggcctcaa
     3121 gccggccgag atcaaacggt tgttccgtcc gttcgcccag gccagcgccg agatcgcgcg
     3181 ccactatggc ggctcggggc tcggccttgc catcgtcaag cgcctcgcca agctgatggg
     3241 cggcgatctg acggt
//
LOCUS       DATMQB010000393         5222 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1119748, whole genome shotgun sequence.
ACCESSION   DATMQB010000393 DATMQB010000000
VERSION     DATMQB010000393.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5222)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5222)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5222
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1119748"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..791)
                     /locus_tag="VNY79_11200"
     CDS             complement(<1..791)
                     /locus_tag="VNY79_11200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011501716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HWX73060.1"
                     /translation="MAVEPRRTPHHDRAAVQRAAGEGRTLAATTPRLILEARRVAATV
                     IHGLHGRRRAGSGENFWQYRRFVSGEPASRVDWRRSARDDHLYVREQEWEAAHTVWIW
                     PDRSPSMAFASPLVRDSKLYRTLVVALALAEVLVEGGERVGIPGLMRPTGSRNVIERM
                     AQVIGHDQSERTSLPPTFAPAPLAEIVLLSDLWSEIADVRRTITQLAGSGARGHVVQI
                     VDPAEETFPYWGRVEFIEPEGGGRITAGRAETWRNDYAARVRRHRA"
     gene            complement(796..1803)
                     /locus_tag="VNY79_11205"
     CDS             complement(796..1803)
                     /locus_tag="VNY79_11205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HWX73061.1"
                     /translation="MPAAGEGLEKLEDMIVRAAETTAQNVRAATAAIGTVIFGQDKVI
                     EQALVTILSGGHALLLGVPGLAKTKLVETMGIVLGLDARRIQFTPDLMPSDILGTEVL
                     EESATGKRSFRFLSGPVFAQLLMADEINRASPRTQSALLQAMQEQHVTVAGTRHDLPK
                     PFHVLATQNPLEQEGTYPLPEAQLDRFLMEIDVGYPDRDAERRILFETTGSEETRAKA
                     AMSSEDLIAAQRLVRRLPVGESVVEAILRLVRSARPGPESGEAAKLIAWGPSPRASQA
                     LMLAVRARALLDGRLAPSIDDVLDLAEPVLKHRMALTFTARAEGETIEGVVGRLKARI
                     G"
     gene            2077..2667
                     /locus_tag="VNY79_11210"
     CDS             2077..2667
                     /locus_tag="VNY79_11210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008137820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1285 domain-containing protein"
                     /protein_id="HWX73062.1"
                     /translation="MAKQGQGGLEDITGALARAGVKGPPPVDRWNPPFCGDLDMRIAA
                     DGTWFYMKTPIGRQALVKLFASILKREGEKYFLVTPVEKCGIKVDDAPFLAVELDAQD
                     SADGRVLSFRTNVDDWVQCGPRHALRFDPEPGTGGLKPYLHVRRDLWAKVTRPLFFDL
                     VELGEEREVDGHAMFGVTSMGVFFPMAPAEQVRDFA"
     gene            2664..3329
                     /locus_tag="VNY79_11215"
     CDS             2664..3329
                     /locus_tag="VNY79_11215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0010945 - coenzyme A diphosphatase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA pyrophosphatase"
                     /protein_id="HWX73063.1"
                     /translation="MSEARASPLIARPDNFFDRARVRLTLEVPPALTNPAAQGARGDL
                     DLNPALWERAGVSATKPAAVLVPIIDREEPTVLLTIRTQELANHAGQVAFPGGKIDPD
                     DESPVAAALREAREEVGLAPMLVEPLGYLDLYLTFTGFRILPTVARVKPDFTLALNPR
                     EVTESFEVPLRFLMTPENHQRKSREWKGVTREFYAIPFENRYIWGATAGIVRNLYERV
                     CSA"
     gene            3326..3589
                     /locus_tag="VNY79_11220"
     CDS             3326..3589
                     /locus_tag="VNY79_11220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6111 family protein"
                     /protein_id="HWX73064.1"
                     /translation="MIRPVATEIGLFLAPFILYAAFLVVTRTGVLQPKAWAPRRVAGL
                     VIVSLVLMAGSFVVLAHFSGAPPGSTYVPAHVDGGKFVPGVTR"
     gene            3589..4833
                     /locus_tag="VNY79_11225"
     CDS             3589..4833
                     /locus_tag="VNY79_11225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HWX73065.1"
                     /translation="MPQARLGDAAWLNEAPVARLLALLDRDGEEARIVGGAVRNALLG
                     LPVAEIDVATTALPAEVMRRVTAAGCKAIPTGIEHGTVTVIIEHQPVEVTTLRQDVET
                     FGRKARVAFGRDWRADAERRDFTINALSASADGMVHDYVGGLADIAVRRVRFIGDARK
                     RIEEDYLRILRFFRFHAYFGEGAPDAAGLLACIRAHAGLERLSRERVRMEVLKLLLAP
                     HAAPTLAVMAEAGLLGGVLGGVPLLASFENVAKIEAVCGMAPDAVRRLGALGVLVKED
                     AERLAQRLRLANAETERLIALEAWWRVTPAAGEQTARALLYRLGPQSFADRVLVAWAR
                     SPAGTADAAWRELASLPQRWTAPVFPLKAADFIRRGIGQGPALGAAMRAAESAWIAAD
                     FPVERAALDAIADEAAQAGRAH"
     gene            complement(4869..>5222)
                     /locus_tag="VNY79_11230"
     CDS             complement(4869..>5222)
                     /locus_tag="VNY79_11230"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ceramide glucosyltransferase"
                     /protein_id="HWX73066.1"
                     /translation="GVLPMIALACIAPAVGLPPLLSVAALAAAWYGGEMLLAAAAGWH
                     LPALYALYGLVRDLLLPFLFVGALHGDDFVWRGNEMQVERMRPRGMMALLRPRLNEIA
                     PVARRRLRALRARMS"
BASE COUNT          809 a         1769 c         1792 g          852 t
ORIGIN      
        1 gcgcggtggc ggcgcacgcg tgcggcgtag tcgttccgcc aagtctcggc acggccggcg
       61 gtgatgcggc cgccgccttc cggctcgatg aactcgacgc ggccccaata cgggaatgtc
      121 tcctcggcgg gatcgacgat ctgcacgacg tggccgcgtg cgccgctacc ggcaagctgc
      181 gtgatcgtgc gccgcacgtc ggcgatctcg ctccaaaggt ccgagaggag cacgatctcg
      241 gcgagcgggg cgggcgcaaa ggtcggcggc aggctcgtgc gctcgctttg atcgtggccg
      301 atcacctgcg ccatccgttc gatgacgttg cggctcccgg tcgggcgcat gaggcctggg
      361 ataccgacgc gctcgccgcc ctcgacgaga acctcggcaa gcgcaagcgc cacgacgagc
      421 gtgcggtaca gcttgctgtc gcgcaccagc ggcgacgcga aggccatcga gggcgaacgg
      481 tcgggccaga tccaaaccgt atgcgcggcc tcccattcct gctcgcgcac atagagatgg
      541 tcgtcgcgtg ccgagcgccg ccagtcgacg cgagaagccg gctcgccgga gacgaagcgg
      601 cggtactgcc agaaattctc tcccgatccg gcgcgccggc ggccgtgcag gccgtggatc
      661 accgtggccg cgacgcgccg cgcctcgagg atcaatcgcg gagtcgtcgc cgcaagcgtg
      721 cggccttcgc cggccgcacg ctgaaccgca gcacgatcat ggtggggggt gcgcctcggc
      781 tcgaccgcca tccgcctatc caattcgcgc cttcaagcgt ccaaccaccc cctcgattgt
      841 ctccccttca gcgcgcgcgg taaaggtgag cgccatgcga tgcttgagca cgggctcggc
      901 aagatcgagc acgtcgtcga tcgacggcgc caagcgtccg tcgagcagcg cccgcgcccg
      961 cacggcgagc atgagcgcct ggctcgcgcg cgggcttgga ccccaggcga tcagcttggc
     1021 ggcttcgccg ctttccggtc ccggccgcgc cgaccgcacc agcctgagga tggcctcgac
     1081 caccgattcg ccgactggca gccgccgcac cagccgctgc gccgcgatca aatcctcgct
     1141 gctcattgcc gccttcgccc gcgtctcctc ggagccggta gtctcgaaca ggattcggcg
     1201 ctcggcgtcg cgatcgggat agccgacgtc gatctccatg agaaagcggt cgagttgcgc
     1261 ctcgggcagc ggataggtgc cttcctgctc cagcgggttc tgcgtggcga gcacgtggaa
     1321 cggcttgggg agatcgtgac gcgtcccggc gacggtgacg tgctgctctt gcatggcctg
     1381 cagcagggcc gattgcgtgc gcgggctggc gcggttgatt tcgtccgcca tcaacagctg
     1441 ggcgaagacc gggccggaga gaaaacggaa gctgcgcttg cccgtggcgc tctcctcgag
     1501 aacctcggtg ccgagaatgt cggagggcat gaggtcaggc gtgaactgga tgcgccgcgc
     1561 gtcgagaccg agcacaatac ccatggtctc gacgagcttg gtcttggcca ggcctggaac
     1621 gccaaggagc agcgcatggc cgccggagag gatggtcacg agcgcctgtt cgatgacctt
     1681 gtcctggccg aagatgaccg tcccgatcgc cgccgtggcg gcacgcacat tctgcgcggt
     1741 cgtttcggcc gcgcgcacga tcatgtcttc gagcttttcg agcccttcgc cggcagcggg
     1801 catagtcaac tcctcgtctt aagtcgcatt tcgtaccgtg aacgatccgc agacgcttgg
     1861 gaaggcagac acctgggaag aatgtaagcc gcgaactttg cgcggctaca gacgatgcaa
     1921 tatatgcgcc agcgccctga accagccctt gcgccgaact tccgatccgc cggagacgac
     1981 ttgggttggg cgcggcatgg tgcgacgtgg cgggttacga taccacgggt tgacgcgccc
     2041 cccgtgggta cttccatctt acgttcaagg caaaccatgg cgaagcaagg gcaagggggc
     2101 ctcgaggata ttaccggcgc cctcgctcgc gcaggcgtga aggggccgcc gccggtcgat
     2161 cgctggaatc cgccgttttg cggcgatctg gacatgcgca tcgccgccga cggaacctgg
     2221 ttctacatga aaacgccgat cggccggcag gccctggtca agctgttcgc ctcgattctc
     2281 aaacgtgagg gcgaaaagta cttcctggtc acgcctgtgg agaagtgcgg cataaaggtc
     2341 gacgacgcgc cgttcctggc ggtcgagctt gatgcccagg attctgcgga cgggcgggtg
     2401 ctcagcttcc gcaccaatgt cgacgattgg gtccaatgtg ggccgcgcca tgcgctgcgc
     2461 ttcgatcccg agcccggcac cggcgggctc aagccctacc ttcacgtccg ccgcgatctg
     2521 tgggccaagg tcacgcgccc gctgttcttt gatctcgtcg agctcggcga ggagcgcgag
     2581 gtcgacgggc acgcgatgtt cggcgtgaca tcgatgggcg tgttcttccc gatggctccg
     2641 gcggagcagg tgagggactt tgcgtgagcg aggcgcgtgc atcgccattg atcgcgcggc
     2701 ctgataattt ctttgatcgc gcacgggtgc ggctcacact cgaagtgccg ccggcgctga
     2761 ccaatccggc ggcgcaaggg gcacgcggcg atctcgatct caatcccgcg ctttgggagc
     2821 gcgccggcgt gagcgccacc aagccggccg cggtgctcgt tccgatcatc gatcgcgagg
     2881 agccgacggt attgctcacc attcgtacgc aggagcttgc caaccatgcg ggccaggtcg
     2941 ccttccccgg cggcaagatc gaccccgacg acgagagtcc ggtcgccgcg gcgctgcgcg
     3001 aagccaggga ggaggtcggg ctcgcgccta tgctggtcga accgctgggc tatctcgatc
     3061 tctacctcac cttcaccggc tttcgcattc tgccgacggt cgcgcgcgtc aagcccgact
     3121 tcacgctcgc actcaatccg cgcgaggtca ccgaatcatt cgaagtgccg ctgaggttcc
     3181 tgatgacgcc ggaaaatcac cagcgcaaaa gccgcgagtg gaaaggcgtc acacgcgaat
     3241 tctacgccat accgttcgag aaccgctaca tttggggcgc caccgccggt atcgtgcgca
     3301 atctctacga gcgggtttgc agcgcatgat ccggcctgtc gcgaccgaaa tcgggctgtt
     3361 ccttgccccg ttcattctct atgccgcgtt tctcgtggtg acgcggaccg gggtattgca
     3421 gccgaaggcg tgggcgccgc gacgcgtcgc cggcctcgtc atcgtgtcgc tcgtgctgat
     3481 ggctggaagc ttcgttgtcc tcgcgcactt ctccggcgcg ccgcccggct ccacctacgt
     3541 tccggcgcac gtcgacggcg gcaagttcgt gccgggagtg acgcggtgat gccgcaggcc
     3601 cggctcggcg atgcggcctg gctgaacgaa gccccggttg cgcgcctcct tgcgctgctc
     3661 gatcgcgacg gcgaggaagc gcgcattgtc ggcggcgctg tgcgcaacgc gctcttgggg
     3721 ctgccggtcg ccgagattga cgtggcgacc acggcgctgc ctgcagaggt catgcgccgc
     3781 gtcacggcgg ccggctgcaa ggcaatcccg accggtatcg agcacggcac cgttaccgtc
     3841 atcatcgagc atcagccggt cgaggtgacg acgctgcgcc aggacgtgga aaccttcggc
     3901 cgcaaggcgc gcgtcgcctt cggccgcgac tggcgcgccg acgccgagcg gcgcgacttc
     3961 acgatcaatg cgctttccgc ttccgccgac ggcatggtcc acgactatgt cggcggcctt
     4021 gccgacatcg ccgtgcgtcg cgtgcgcttc atcggtgacg cgcggaagcg catcgaagag
     4081 gattacctgc gcatcctgcg cttcttccgc ttccatgcct atttcggcga aggcgccccg
     4141 gacgcggcgg gtttgctcgc ctgcatcagg gcgcacgccg gcctcgaaag gctctcgcgc
     4201 gaacgggtgc gcatggaggt gctcaagctt ctgctcgcgc cgcatgcggc gccgacactc
     4261 gcggtcatgg ccgaggccgg cctgctcggc ggcgtgctcg gcggggtgcc gctgctcgcg
     4321 agcttcgaga acgtggcgaa gatcgaggcg gtgtgcggca tggcgcccga cgcagtgcgc
     4381 cgcctcggcg cactcggcgt actggtcaag gaggatgcgg aaaggcttgc gcagcggctg
     4441 cgcctcgcca acgccgagac ggagcggctc atcgctctcg aggcctggtg gcgcgtcacg
     4501 ccggcggccg gggagcagac ggcgcgcgcg ctcctctatc gtctcgggcc gcaatcgttc
     4561 gccgaccgcg tgcttgtcgc ctgggcgcgc tcgcccgcgg gaaccgccga tgcggcctgg
     4621 cgcgagcttg caagcctgcc gcaacgctgg acggcccccg tcttcccgct caaggcggcg
     4681 gatttcatcc gccgcggcat agggcagggc ccggcgcttg gcgccgccat gcgcgcggcc
     4741 gaatcggcat ggatcgcggc cgatttcccc gtcgagcgcg cggcgctcga cgccattgcc
     4801 gatgaggctg cgcaagctgg tcgggcgcat tgaacggagc gaatgcggca cggcccgttc
     4861 gccgcgcttc acgacatcct ggcgcgcagc gcgcgcaagc ggcggcgcgc gaccggcgcg
     4921 atctcattga gtcgcggccg caacagcgcc atcatcccgc gcgggcgcat gcgctcgacc
     4981 tgcatctcgt tgccgcgcca gacgaagtcg tcgccgtgca gcgcgccgac gaagaggaag
     5041 ggtagaagca gatcgcgcac gagcccgtag agcgcataga gcgctgggag gtgccatccg
     5101 gccgcggcgg cgagcagcat ctccccgcca taccaggcag cggcgagcgc ggcgacgctc
     5161 agcagcggcg gcaggccgac cgccggagcg atgcaggcga gcgcgatcat cggcagcacg
     5221 cc
//
LOCUS       DATMQB010000394         2677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_808780, whole genome shotgun sequence.
ACCESSION   DATMQB010000394 DATMQB010000000
VERSION     DATMQB010000394.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2677
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_808780"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(2..1282)
                     /locus_tag="VNY79_11235"
     CDS             complement(2..1282)
                     /locus_tag="VNY79_11235"
                     /inference="COORDINATES: protein motif:HMM:NF042649.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HWX73067.1"
                     /translation="MYDIRHIDIGVRCAFTNTVPTAPYRGAGRPEANYVLERVVEEAA
                     RVTGIDPAKLRRRNLIPASAMRYKTAVGTTFDSGDFAPILGKALALAGYASVKTRKRE
                     AARRGKLRGIGISCMLEHAGGTPTEGALLAFPGDGTVTVGLNVQSTGQGHASIFPRLA
                     AERLGLPRSMVTHRHGDSALEIAGYASVGSRSAMTAGASLVKCIDVMLEKGRRIAALL
                     LEASDADITYAAGSFGVVGTDRRIALTELATHAAELKRNGTIEEDLDTNVTTDTPLTF
                     PNGVHIAEVEIDPETGRMEVVAYSAVDDCGNVLDGMIVEGQLHGAVAQGLGQALMEHV
                     VYDDGGQLVTGSFMDYAMPRADDMPPIRDELSCVPATTNPLGVKGVGEAGTTAAIAAV
                     MNAVADAIPGGAGAHLDMPVSAARLWEACRQARA"
     gene            complement(1306..2334)
                     /locus_tag="VNY79_11240"
     CDS             complement(1306..2334)
                     /locus_tag="VNY79_11240"
                     /inference="COORDINATES: protein motif:HMM:NF014758.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin cofactor-binding domain-containing
                     protein"
                     /protein_id="HWX73068.1"
                     /translation="MEAKSPDRATVEPRVEDDVLLRGQGRYMADARWPNQAYACFVRS
                     PHACARIAGVNAAAAREAPRIVSVLTGSDAAELGSIGRHPPLAGRGGKPLITPHRPAL
                     AATRVMHVGEPVVMVVGESAAAAQDAAELVDVDYEPLPGATDARAALVPGAPQVWPEA
                     PGNLAIDWPGLAADPEANAREVDAIFKAAKFVARIAVTNQRIAIASMEPRGATASYDP
                     AGDKYTLRVCSQGARILRDDIAVILKIPKERLRVLTEDVGGAFGLKTGAYPEYVALLL
                     GAKKLGRPIHWMSGRSEAFLSDNQARDNYSEAELALDESGRFLALRIRNTANLGAYLG
                     SVGAAIPS"
BASE COUNT          390 a          888 c          967 g          432 t
ORIGIN      
        1 cctatgcccg tgcctgtcgg cacgcctccc acagccgcgc cgcgctcacc ggcatgtcga
       61 ggtgcgcgcc cgccccgccg ggaatggcgt ccgcgaccgc gttcatcacc gcggcgatcg
      121 cggccgtggt gccggcttca ccgacgccct tgacgccgag cggattggtg gtcgccggca
      181 cgcaggatag ctcgtcgcgg atcggcggca tgtcgtcggc gcgcggcatg gcgtagtcca
      241 tgaacgagcc ggtaacgagc tggccgccat cgtcgtagac cacgtgctcc atcagcgcct
      301 ggccgagccc ttgcgcgacc gcgccgtgta gctggccctc gacgatcatg ccgtcgagca
      361 cgttgccgca atcgtcgacc gcagaatagg cgacgacctc catgcgcccc gtctcgggat
      421 cgatctcgac ctcggcgata tgcacgccgt tggggaaggt cagcggcgta tccgtggtga
      481 cgttggtatc gagatcctct tcgatcgtgc cgtttcgttt cagctcggcc gcgtgcgtgg
      541 caagctcagt gagcgcgatg cggcggtcgg tcccgacgac gccgaagctg ccggcggcgt
      601 aggtgatgtc ggcgtcggag gcctcaagca gcagcgcggc gatgcgcctg cctttctcga
      661 gcatgacgtc gatgcatttg acgagggagg cgccggcggt catcgctgag cgcgagccga
      721 ccgaggcgta gccggcgatt tccagcgccg aatcgccgtg ccggtgggtc accatgctgc
      781 gcggcaggcc gaggcgctcg gcggccaggc ggggaaagat cgaggcgtgg ccctggccgg
      841 tcgactgcac gttgagcccg accgtcaccg tgccgtcgcc ggggaacgcc agcagcgccc
      901 cttcggtggg cgtgccgccg gcatgctcca gcatgcagga aatgccgatg ccgcggagct
      961 ttccgcgcct tgccgcttcg cgcttgcgcg tcttgacact ggcgtagccg gcaagcgcca
     1021 gcgccttgcc gaggatcggt gcgaaatcgc cgctgtcaaa ggtggtgcca acggcggtct
     1081 tgtaccgcat ggcggaagcc gggatgagat tgcgccgccg cagctttgcc ggatcgatgc
     1141 cggtgacgcg tgcggcttcc tcgaccacgc gttcgagcac gtagttcgcc tccggccgcc
     1201 cggcgccgcg atagggggcg gtcggcaccg tgttggtgaa ggcgcagcgc acgccgatgt
     1261 cgatgtgccg gatgtcgtac atgccgggca ggcagcggct gaagctcagc tcggaatcgc
     1321 cgcgccgacc gagccgagat aggcgccgag gttggcggtg ttgcggatgc gcaacgccag
     1381 gaagcgcccg ctctcgtcga gcgccagctc cgcctcggaa tagttgtcgc gcgcctggtt
     1441 gtcgctgagg aacgcctcgg agcggccgga catccaatga atcggccggc cgagcttttt
     1501 cgcgccgagc agcagcgcga cgtattccgg ataggccccg gtcttgaggc cgaaggcgcc
     1561 gccgacgtcc tcggtcagca cccgcagccg ctccttcggt attttgagga tgacggcgat
     1621 atcgtcgcgc aggatgcgcg cgccctgcga gcagacgcgc agcgtatatt tgtcgcccgc
     1681 cggatcatag cttgcggtgg cgccgcgcgg ctccatcgag gcgatcgcga tgcgctgatt
     1741 ggtcaccgca atgcgggcga cgaatttggc ggccttgaag atcgcatcga cctcgcgcgc
     1801 attggcctcg ggatcggcgg caagcccggg ccagtcgatg gccaggttgc ccggcgcctc
     1861 cggccagact tgcggcgcgc cggggacgag cgcggcgcgg gcgtcggttg cccccggcaa
     1921 cggctcgtag tcgacgtcga cgagctcggc ggcgtcctgc gccgcggcgg cgctctcgcc
     1981 gacgaccatc accaccggct caccgacatg catgacccgc gtcgcggcga gtgccggccg
     2041 gtgcggcgtg atcagcggct tgccgccgcg gccggcgagc ggtgggtgcc gcccgatgct
     2101 gccgagttcc gcggcgtcgc tcccggtgag cacgctgacg atccggggcg cctcacgcgc
     2161 ggccgcagcg ttcacgcccg cgatgcgggc acaggcatgc ggcgagcgca cgaaacaggc
     2221 gtaggcctga ttcggccacc gcgcgtcggc catgtaacgg ccttggccgc gcaggagaac
     2281 gtcatcctcc acccggggct caaccgtcgc gcgatccggc gattttgctt ccatgctctg
     2341 ttccggggtt tcgggcgccg agcctgcctt tatagcggaa agcgcagtcg gccgaaggcg
     2401 tttggccccg acttggcagc gcggaactcc tcgtcgcgca gagcgggagg aaaggcaagt
     2461 cgcccgcggg ggcgggggcg ttctgcgcaa cgcggtcgcc atgccggtgg aaatggtgaa
     2521 gcagcgtgaa aattgggcgt tgcctgcgga tttacgtttg ttaggatggc gcgggggcgg
     2581 agtttcgacc aagcgccatt ccccgttgaa cgccgacccg gacttgccgg ggttggatgg
     2641 agatgaggaa aaagccgaag acctcaggcg aggcgct
//
LOCUS       DATMQB010000395         2027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_171197, whole genome shotgun sequence.
ACCESSION   DATMQB010000395 DATMQB010000000
VERSION     DATMQB010000395.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2027
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_171197"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..437)
                     /locus_tag="VNY79_11245"
     CDS             complement(<1..437)
                     /locus_tag="VNY79_11245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004671766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HWX73069.1"
                     /translation="MVSSALAAALARRNIHYGWIVVAVTFLTMLVTAGAMGAPGVLIV
                     PLEREFGWDNAQISSALALRLLLFGVFGPFAAAFMNRFGLRRVMICALALVVAGFVAS
                     LAMTHVWQLVLLWGVVIGVGTGLTAIVLAATVAARWFTQRRGLV"
     gene            549..1127
                     /locus_tag="VNY79_11250"
     CDS             549..1127
                     /locus_tag="VNY79_11250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012559109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HWX73070.1"
                     /translation="MRVSREKAAENRQRIIDAAGVLFRAKGFAGIGVADIMRAADLTH
                     GGFYGHFASKDDLAAQASRRALARSAAKWERVAAGSPKGAYGALLANYLTPTHRDDPA
                     RGCAFAALGSDAARGGKAVHAAFADGLQPFLDILAEAIPGRSKAARRRKAVATMAALV
                     GAVTLARAVGNQRFSDEILEAVHRELLEAVDR"
     gene            1227..2027
                     /locus_tag="VNY79_11255"
                     /pseudo
     CDS             1227..2027
                     /locus_tag="VNY79_11255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023326.1"
                     /note="frameshifted; incomplete; missing C-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium chelatase domain-containing protein"
BASE COUNT          322 a          708 c          695 g          302 t
ORIGIN      
        1 accagcccgc ggcgctgggt gaaccagcgc gccgcgacag tcgcggcgag cacgatcgcg
       61 gtgaggccgg tgccgacgcc gatcacgacg ccccagagga gcaccagttg ccatacgtgc
      121 gtcatcgcca gcgaggcgac aaagccggcc acgaccagag cgagcgcgca gatcatcacg
      181 cggcgcagtc cgaagcggtt catgaacgcc gccgcgaacg ggccgaacac gccgaacagc
      241 aacaggcgca gcgccagcgc gctcgaaatc tgcgcgttgt cccagccgaa ctcgcgctcg
      301 agcggtacga tgagcacgcc gggcgcgccc atggccccgg cggtcaccag catggtgagg
      361 aaggtgacgg cgacgacgat ccagccgtag tggatgttgc ggcgcgccag cgccgcggcg
      421 agcgcagatg acaccatggc cgtcatcgtt ctcccggacg ttagatgatg atcatcatca
      481 ttcttgcgta ttgatgatgg gcgtcatata acttgtcaac ggtgcgccgc gcatggccgg
      541 gctgcagcat gagagtgagc cgggagaaag ccgccgagaa tcgccaacgc atcatcgatg
      601 cagccggcgt gctgtttcgc gccaagggct ttgccggcat cggcgtcgcc gacatcatgc
      661 gggccgccga tctgacgcat ggcggcttct acggccactt cgcctccaag gacgatctcg
      721 ctgcacaggc aagccggcgg gcactggcgc gctccgccgc caagtgggag cgcgttgccg
      781 cgggttcgcc caagggcgcc tacggggcgc tgctcgcgaa ctacctcacg ccgacgcacc
      841 gcgacgaccc cgcgcggggc tgcgcctttg ccgcgctcgg ctccgatgcc gcgcgtggcg
      901 gcaaggcagt ccacgcggcg ttcgccgacg gcttgcagcc cttcctcgac attcttgccg
      961 aagctattcc ggggcgctcg aaggcggcgc gccggcgcaa ggccgtcgcc accatggcgg
     1021 cactggtcgg cgccgtcacg ctggcccggg cggtcggcaa ccagcgtttt tcggacgaaa
     1081 ttctcgaggc ggtacatcgg gaactgctgg aggccgtcga ccgctgagcg ccaggttttg
     1141 cccgggactc tctcgggttc gttctctaaa tgttcttgcg gaactcatgg gcctcagcta
     1201 ctgtgcggcc gagggcaggg tcggacatgg tccagcgcgt ctccacggtg tcgttcgagg
     1261 gcgtcgaggt ccggccagtc gacgtgcagg tgcaggtcgc gccggggatg ccggcgttca
     1321 ccgtcgtggg gttgcccgac aaggcggtct ccgaagcgcg cgagcgcgtg cgctcggcca
     1381 tgatcgcgtc cgggctggcg ctgccggcgc ggcgcatcac cgtcaatctc gctcctgccg
     1441 atctgcccaa ggagggaagc cactacgacc tgcccatcgc gctcgggctg atggcggcga
     1501 tcggcgccat cccgcacgac gcgctgtcgg gattcgcggt attgggcgaa ctcggcctcg
     1561 acgactcgat cgccgctgtc gccggcgtcc ttcccgccgc catcggcgcc aatgcgcgcg
     1621 gcgagggctt gatctgcccg gccgcatgcg ggccggaagc ggcgtgggcg agccccgaga
     1681 tcgagatcgt cgcggcgtcc tcgctcatcc agctcgccaa ccacttcaag ggcacgcagg
     1741 tgctctcgcg gccgcaacga aaatcctcga ggcaggaggc gtcgcgctcg acctcgccga
     1801 catcaagggc caggaaagcg ccaaacgcgc gctcgaagtc gcagccgccg gcggccacaa
     1861 cctgctcatg gtcggaccgc ccggcaccgg caagtcgatg ctcgcggcgc ggcttccctc
     1921 catcctgccg ccgctcgcgc cggccgaact tttggaagtg tcgatggtcg cctccgtcgc
     1981 cggcgagatc aaaggcggcg cgctcaccaa ccggcggccg ttccgcg
//
LOCUS       DATMQB010000396         8017 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3596592, whole genome shotgun sequence.
ACCESSION   DATMQB010000396 DATMQB010000000
VERSION     DATMQB010000396.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8017)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8017)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8017
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3596592"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1975
                     /locus_tag="VNY79_11260"
     CDS             <1..1975
                     /locus_tag="VNY79_11260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004197 - cysteine-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="caspase family protein"
                     /protein_id="HWX73071.1"
                     /translation="ATPANDAGLIANALQAAGFTVTGARNLDQATLRESFREFVDQLA
                     AAGPDAVAFVYLAGFGLQFEGENYFVPVDADPQRDVDIPLQAVRMSDFMQPLAALPGR
                     VKIVILDAARQNQFARGGQPLAGGLALVDPGPSMAIAFNAAPGTVGPDEQGPYGAYAT
                     SLTEMIAAGGLGLDDVFARVRLRVSELTNGGEIPWYASQIEGPFFFTDRVADAPPPPS
                     AVPLADLRRKPIRGYSNAEDAYEAALAMDSMEAYEQFLAAYPDSPFARRISAMLAVRR
                     EEIIWRRCVLTDTPPAYWSYLRRYPRGPHVWDARRRLARLGGAMEPPPSFAFIEFGVP
                     PPPAFELDFVGQPVLVLWGPSFAPPPRPPLVFLPPRPREFAVLPPPPAARERFSLPAP
                     AAPVVPAFVRPPRNVAPAATSPGAAPPGGRPAAAVALPAAVQSKATPGAPGAKPAAPA
                     AAPSSAAVNPAPVPPPPSSTAPAAVKPGTPPPATGPAPATVKPGTPPPPPATGPAPAT
                     VKPGTPPPPPPATGPTPATVKPGTPPPPATGPAPATVKPGTPPPLPPATGPAPATVKP
                     AKPPPPPTSPAPVTVKPAAPPPPPPPAPKPATAKPAPPPPPPPAAAPKPAAAKPAPPP
                     PPPAASPPAAAAGKPACPPGKTLAQVAGHPTCK"
     gene            2150..2626
                     /locus_tag="VNY79_11265"
     CDS             2150..2626
                     /locus_tag="VNY79_11265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2948 family protein"
                     /protein_id="HWX73072.1"
                     /translation="MEELKLVALDKDDIEIVSAHVQDALVKVADILWQPREHRFVVAL
                     NRFDWMNAADARGAKNPDDAVPDYRRCRTALRFERVNTCKCRDLDPLDRNAVLNLLAV
                     EFAERDPPAGTVTLTFSGGAAIRLEVECLEAELVDLGEVFSAVLCPDHFAADTTTA"
     gene            complement(2705..3532)
                     /locus_tag="VNY79_11270"
     CDS             complement(2705..3532)
                     /locus_tag="VNY79_11270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_component: GO:0033573 - high-affinity iron permease
                     complex [Evidence IEA];
                     GO_function: GO:0005381 - iron ion transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0034755 - iron ion transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FTR1 family protein"
                     /protein_id="HWX73073.1"
                     /translation="MLPSLLIVFREVFEAGLVIGIVMAVTSSVPGRGLWVAGGVAAGV
                     LGACIVALFTGGLSELFGGSGQELFNAGILGFAVVMLGWHNIWMARHGREIASEMRAA
                     GEAVATGAKSLAALAVVVMIAVLREGSEVVLFLYGVAAAQGGGDLSMAAGGAAGLVLG
                     ALVCLLTYLGLITIPARYLFAVTSTLIALLAAGMAAQAIAFLQQANIVTAFDETVWNT
                     SWILSDSSLLGRALHTLIGYVDQPTAMQLIAYAATLAVILVLMRLFAVRPAQRPRAA"
     gene            complement(3554..3898)
                     /locus_tag="VNY79_11275"
     CDS             complement(3554..3898)
                     /locus_tag="VNY79_11275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018267293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupredoxin domain-containing protein"
                     /protein_id="HWX73074.1"
                     /translation="MRSGRSLLAATVLASAAMLAGVPARADDAVTLSLTIKDRRFDPA
                     ELHAPPGKAITLQVKNLSSIACEIESSELHFEKVIAAGAEATIRVRPLQPGRYSFFDD
                     FHHETQGFLVVP"
     gene            4168..5460
                     /gene="hisD"
                     /locus_tag="VNY79_11280"
     CDS             4168..5460
                     /gene="hisD"
                     /locus_tag="VNY79_11280"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013504376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004399 - histidinol dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0000105 - histidine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HWX73075.1"
                     /translation="MSIRLDTRAGDFAQRFRAFLDTKREVAADVDAAVRAIVDDVAAR
                     GDGALKDYTRKFDRFDPDRVGLRVKAEEIAAAFDACGRKTLAALELARDRIEVFHRRQ
                     LPRDDRFEDALGVELGSRWTAIEAVGLYVPGGTAAYPSSVLMNAVPARVAGVPRIVMV
                     VPAPGGAVSPLVLAAAKLAGVEEIFRVGGAQAIAALAYGTETIAPVAKIVGPGNAYVA
                     AAKRIVFGRVGIDMIAGPSEVLILADRTGNPGWIAADLLAQAEHDASAQAILVTDDAP
                     LAAAVEGAIDAELARLPRGEIAGASWRDFGAVILVRELDEAVALVDAIAPEHLEIAAA
                     DADRLAGCIRNAGAIFIGAHTPEAIGDYVAGSNHVLPTARSARFSSGLGVLDFMKRTS
                     ILKCGPEQLRALADAAIALAEAEGLDAHARSVAIRLNR"
     gene            5460..5951
                     /locus_tag="VNY79_11285"
     CDS             5460..5951
                     /locus_tag="VNY79_11285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007597559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0262 family protein"
                     /protein_id="HWX73076.1"
                     /translation="MGRGADQEERGRLVAVTLDESSIGRANRDVEHERAVAIYDLIED
                     NSFRPLDHDGGPYALTIGISGNRLVFDIREADGTPVIAHLLSLAPFSRIVKDYFTVCD
                     SYYAAIRTATPDRIEALDMGRRSLHDEGSRILMERLRRKVEIDFDTARRLFTLVTVLH
                     WKG"
     gene            5961..6431
                     /locus_tag="VNY79_11290"
     CDS             5961..6431
                     /locus_tag="VNY79_11290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphatase family protein"
                     /protein_id="HWX73077.1"
                     /translation="MPASATRPPRPLAVLFACGQNSVRSPIAAGLFAQMFGPSTYVSS
                     AGVRKGELDPFAIAVMAELGLDISKHKPVTFEELDEWEGLNFDLIITLAPEAHHRALE
                     LTRTSGVDVEYWPTADPTVVEGSRSQRLDAYREIRDQLTERIRQRFSRPSSGNE"
     gene            6638..6856
                     /gene="infA"
                     /locus_tag="VNY79_11295"
     CDS             6638..6856
                     /gene="infA"
                     /locus_tag="VNY79_11295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_002517801.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003743 - translation initiation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006413 - translational initiation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HWX73078.1"
                     /translation="MAKEELLEFPGVVTELLPNATFRVKLENDHEIIAHTAGRMRKNR
                     IRVLAGDKVLVEMTPYDLTKGRITYRFK"
     gene            6939..7562
                     /locus_tag="VNY79_11300"
     CDS             6939..7562
                     /locus_tag="VNY79_11300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019195294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047429 - nucleoside triphosphate
                     diphosphatase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Maf-like protein"
                     /protein_id="HWX73079.1"
                     /translation="MIGRPKFVLASGSPRRLALVNQAGIEPDALRPADIDETPKRGEL
                     PRACATRLARKKAEVALAMVRADEELKGAFILAADTVVAVGRRILPKAELLDEAAQCL
                     RLLSGRNHRVHTAVCLVTPRETFRQRHVETRVRFKRLSDEDIEAYLASGEWRGKAGAY
                     AAQGIAGTFMVKVVGSYSNIIGLPLYETMTLLGGEGYPIHFGWLNVV"
     gene            7601..7795
                     /gene="yacG"
                     /locus_tag="VNY79_11305"
     CDS             7601..7795
                     /gene="yacG"
                     /locus_tag="VNY79_11305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase inhibitor YacG"
                     /protein_id="HWX73080.1"
                     /translation="MRAAQPRKACPICGESAVQRFRPFCSRRCADVDLNRWLSGVYAI
                     PMREDEEEDERRDDSAEGPQ"
BASE COUNT         1320 a         2836 c         2608 g         1253 t
ORIGIN      
        1 ggcgacgccg gccaatgacg caggcctcat cgccaatgcc ctgcaggccg caggcttcac
       61 cgtcaccggc gcgcgcaacc tcgatcaggc gacgctgcgc gaatcgtttc gtgaatttgt
      121 cgatcagctc gcggccgccg ggccggacgc cgtcgccttc gtttatctag ccggtttcgg
      181 attgcagttc gagggcgaga actatttcgt tccggtcgat gccgatcccc agcgggacgt
      241 cgatattccg cttcaagccg tgcgcatgtc ggatttcatg cagccgctgg cggcgctgcc
      301 ggggcgggtg aagatcgtca ttctcgacgc ggcgcggcag aatcagttcg cgcgcggcgg
      361 tcagccgctg gccggcggcc tggcgctggt cgatcccggt cccagcatgg cgatcgcctt
      421 caacgcggcg ccgggcacgg tcgggcccga cgagcaaggc ccttacggcg cgtacgcgac
      481 ctcgctgacg gaaatgatcg ccgccggcgg gctcggcctc gatgatgtgt ttgctcgggt
      541 tcgcctgcgc gtcagcgaac tcacgaacgg cggcgagatt ccctggtacg cgtcgcagat
      601 cgaaggtccc ttcttcttca ccgaccgggt cgccgacgcg ccgccaccgc cgagcgcggt
      661 gccgctcgcc gatctgcgca gaaaaccgat tcgcggatat tcaaacgccg aagatgcgta
      721 tgaagcggcg ctggcgatgg actcgatgga agcctatgag cagttcctcg ccgcctatcc
      781 cgacagtccg ttcgcccgcc gcatctccgc gatgctggcc gtgcgtcgcg aggagatcat
      841 ctggcgtcga tgcgtgctga ccgacacgcc gccggcctac tggtcgtatc tgcgccgcta
      901 tccgcgcgga ccgcatgtct gggatgcccg acggcgattg gcgagactcg gcggcgcgat
      961 ggagccgccg ccgtccttcg ccttcattga gttcggcgta ccgccgccgc cggcgttcga
     1021 attggacttc gtcgggcagc cggtcctggt cctctggggg ccgagcttcg ccccgccgcc
     1081 gcgcccgccc ctcgtctttc taccgccgcg gcctcgcgaa tttgccgtgc tgcctccgcc
     1141 cccggcggcg cgcgaacgct tttctcttcc cgctcccgct gcgccggtcg ttcccgcgtt
     1201 cgtcaggccg ccgcgcaacg tggcgccggc cgcgacgtcg cccggcgccg caccgcccgg
     1261 cggccgtccg gcagccgcgg ttgcgttgcc ggccgccgtg cagagcaagg caactcccgg
     1321 cgcacctgga gccaagcccg ctgcacccgc agcagcgccg tcgagcgcgg ctgtaaatcc
     1381 cgcaccggtg cctccgccgc cttcgagtac ggcccctgcg gctgtcaagc cgggcacacc
     1441 gccacctgcg acgggtccgg cacccgcaac cgtgaagccc ggcacaccac cgccgccgcc
     1501 tgcgacggga ccggcgcctg caaccgtgaa gccagggacg ccaccaccgc cgccaccagc
     1561 gaccggtccg acgcccgcaa ccgtgaagcc cggcacgccg ccgcccccgg cgacaggccc
     1621 cgcgcccgcg accgtcaagc cagggacgcc accgccgctg ccccctgcga cgggtccggc
     1681 gcctgcgacc gtcaagccgg cgaagccgcc tcctcctcca acaagtccgg cgcccgtgac
     1741 cgtcaaaccc gcggcgccgc ctccgccccc accgccagcg ccgaagccag cgaccgctaa
     1801 gccggcgccg cctccgccac caccgccggc cgcggcgccg aaaccggcgg cggcgaaacc
     1861 agcgccaccg ccgccgccac ctgcggcttc accgccggct gcggcagcgg gcaagccggc
     1921 atgcccgcca ggcaagacgc ttgcccaggt ggcggggcat ccgacctgca aataggacca
     1981 ggtcgcgccg ccgcggcgac gcgttgcgcc cgcacggttt cagcttgcgc ctgaagaact
     2041 ggaaagttgc gtctccggcg cgcacacgcc attgaccggg tcttgcgggc cggcgacccg
     2101 cttcttaatt ttcacagcag agagaggatt ggggagaacg ggacccgcca tggaggagct
     2161 gaagctcgtt gctctcgaca aggacgacat cgaaatcgtt tccgcgcatg tgcaagatgc
     2221 cctcgtcaag gtggccgaca ttttgtggca gccgcgcgag caccggttcg tcgtggcgct
     2281 caaccgcttc gactggatga acgcggccga cgccagggga gcaaaaaacc ccgacgacgc
     2341 ggtgccggat taccggcgct gccgcacggc gctgcggttc gagcgcgtca atacctgcaa
     2401 gtgccgagat ctcgatccgc tggacaggaa cgctgtgctc aatctgctcg cggtcgagtt
     2461 cgccgagcgc gacccgcctg ccggcactgt gacgctgacc ttctccggcg gcgccgccat
     2521 acgcctcgag gtcgaatgcc tcgaggccga gctcgtcgat ctcggcgaag tcttttcggc
     2581 agtgctctgc cccgatcact tcgccgccga taccacgacg gcgtaacgcg ttcccgcggc
     2641 cgtgcgccga gcgcgcctct ggattttggc ggctacgtca cgccgggagc cggaatgacg
     2701 gcggttacgc cgcacgcggg cgttgcgccg gccgcacggc gaacagtcgc atcagcacca
     2761 ggatcacggc gagtgtcgcc gcgtaggcga tgagctgcat ggcggtcggc tgatccacgt
     2821 agccgatcag cgtatgcagg gcccgcccga gcaggctcga gtcgctgagg atccaggagg
     2881 tgttccacac ggtctcgtcg aacgccgtga cgatgttggc ctgttgcagg aaggcgatcg
     2941 cctgcgccgc catgcccgcg gccaacagcg cgatcagcgt gctggtgacg gcgaacaaat
     3001 agcgtgcggg aatggtgatc agcccgaggt aggtgagcaa gcagacgagc gcgccaagaa
     3061 caagcccggc cgcaccgccc gccgccatgc tgagatcgcc gccgccttgc gccgccgcca
     3121 cgccgtagag aaacagcacg acctcggagc cctcgcgcag caccgcgatc atcaccacga
     3181 ccgcaagcgc ggcgagcgat ttggcgccgg tggccaccgc ctcgccggcg gcgcgcattt
     3241 ccgacgctat ttcgcggcca tgccgcgcca tccatatatt gtgccagccg agcatcacca
     3301 cagcgaagcc gagaatgccg gcgttgaaca gctcctggcc gctgccgccg aacagctcgg
     3361 acaagccgcc cgtaaagagc gccacgatgc aggcgccgag cacgccggcc gcgaccccgc
     3421 cggcaaccca gagcccgcgt ccggggacgc tggaggtcac ggccatgacg atgccgatga
     3481 ccaggccggc ctcgaaaact tcacgaaaga cgatcagcag cgacgggagc acggacacct
     3541 cacggcacaa gcatcacggc acaaccagga aaccctgcgt ctcgtgatgg aaatcgtcga
     3601 agaagctgta gcggcccggt tgcagcggcc gcacgcggat agttgcttcg gcgccggcgg
     3661 cgatcacctt ctcgaaatgc aattcgctgc tctcgatctc gcaggcgatg gagctgaggt
     3721 tcttgacctg gagcgtgatc gccttccccg gcggcgcgtg cagctccgcc ggatcgaaac
     3781 ggcgatcctt gatcgtcagc gagagcgtca cggcgtcgtc ggcgcgcgcc ggcacaccgg
     3841 ccagcatcgc cgcagaagcc agcactgtcg ctgcaagcaa tgaccggccg cttctcatga
     3901 cggttcgctc gatcatcatg cgcctcgctc aagcattact ataaagcagt tgggcaacaa
     3961 cgcagttttg tcaatcggcg cagcaaatat tagaattgtt ataataagag agtgctggta
     4021 gcagtcggcc gtcgcgaact tctcatgtcg ccatggccgg gccagtcccc ggccatccat
     4081 gtcttagcgt tgagttgtca agacgtggat gccttgagaa cgggcccggg cgtgacgcgc
     4141 caccgcacag cgtgtaggtc acttgtcatg agcatccgcc tcgacacacg cgccggcgat
     4201 tttgcgcaga ggttccgcgc gttcctcgat accaagcgcg aagtggccgc tgacgtggac
     4261 gccgcggtgc gcgccattgt cgacgacgtg gccgcccgcg gcgacggcgc gctcaaggac
     4321 tacacacgga aattcgatcg gttcgatccc gaccgggtgg gcctgcgggt aaaggccgag
     4381 gagatcgccg ccgcgttcga cgcctgcgga cgcaaaacgc tcgcggcgct cgaacttgcc
     4441 cgcgaccgca tcgaggtgtt tcaccgccgc cagctgccgc gggatgaccg cttcgaggat
     4501 gcgctcggcg tcgaactcgg ctcgcgctgg acggcaatcg aggcggtcgg actctatgtg
     4561 ccgggcggaa cggcagccta tccttcctcg gtgctgatga acgcggtgcc ggcccgcgtt
     4621 gccggcgtgc cgcggatcgt catggtggtc ccggctcccg gcggcgccgt atcgccgctc
     4681 gtgctcgctg ccgcgaaact cgccggcgtc gaggagatct tccgcgtcgg cggcgcccag
     4741 gccatcgcgg cgctggccta cggcaccgag acaatcgccc ccgtcgccaa gatcgtcggg
     4801 ccgggcaacg cctatgttgc cgcggccaag cgcatcgtct tcggcagagt gggcatcgac
     4861 atgatcgccg gaccgtccga ggtcctgatc ctcgccgaca ggacgggcaa tccgggctgg
     4921 atcgctgccg atctgctggc ccaggccgag cacgacgcga gcgcgcaggc catcctcgtc
     4981 accgacgacg cgccgcttgc cgccgcggtc gagggcgcga tcgacgccga gctggcgcgg
     5041 ttgccgcggg gagaaatcgc cggcgcgtcg tggcgcgact tcggcgcggt gattttagtg
     5101 cgcgaactcg acgaagcggt agcgctcgtc gacgcgatcg cgcccgagca cctcgagatc
     5161 gccgcggccg atgccgaccg gctcgccggg tgcatccgca atgccggcgc gatcttcatt
     5221 ggcgcgcaca cgccggaggc gatcggcgat tacgtcgccg gttcgaatca cgtgttgccg
     5281 acagcgcgct cggcgcggtt ttcctccggg ctcggtgtcc ttgatttcat gaagcgcacc
     5341 tcgatcctca agtgcggccc ggagcaattg cgcgcgctgg ccgacgccgc gatcgcgctc
     5401 gccgaggcgg agggcctcga cgcccacgcc cgctcggtgg ccatccggct caaccgttga
     5461 tggggcgcgg cgcagaccag gaggagaggg gccgcctcgt ggcggtgacg ctcgacgaat
     5521 cttcgatcgg gcgggcgaac cgcgacgtcg agcacgagcg cgcggtcgcg atctacgatc
     5581 tcatcgagga caacagcttt cgtccgctcg accatgacgg cgggccctac gccctcacga
     5641 tcggtatcag cggcaaccgc ctcgtcttcg acatccgcga agccgacggc acgccggtga
     5701 tcgcgcatct gctctcgctc gcgccgttca gccgcatcgt caaggactac ttcaccgtct
     5761 gcgacagcta ctacgcggcc attcgcacgg cgacgccgga ccgcatcgag gcgctcgaca
     5821 tgggccgccg ctcgctgcac gacgagggtt cgcgcatcct catggagcgg ctgcgccgca
     5881 aggtcgaaat cgacttcgat acggcgcggc ggctgttcac gctggtcacg gtgctgcact
     5941 ggaaggggtg aggagccgcg atgccggcgt ccgcaacgcg acccccgcga cccctggcgg
     6001 tgctgttcgc ctgcggacaa aattccgtgc gctcgccgat cgcggccggc ctgtttgcgc
     6061 agatgttcgg cccctcgacc tatgtgtcct ccgcgggcgt gcgcaagggc gaactcgatc
     6121 cgtttgcgat cgcggtcatg gcggagctcg gcctcgacat ctcaaagcac aagcccgtca
     6181 ccttcgagga gctcgacgaa tgggagggtc tcaatttcga tctcatcatc acgctggcgc
     6241 cggaagcgca tcatcgggcg ctggaattga cccgcaccag cggcgtcgat gtcgagtatt
     6301 ggccgacggc ggatccgact gtcgtcgaag gcagccgctc gcagcggctc gacgcctatc
     6361 gggaaatccg cgaccagctc acggagcgaa tccgccagcg cttttccaga ccgagttccg
     6421 gcaacgagtg acgatgagga attcgcccgc agcaccgcac ggcttggttt cgcgcgcaac
     6481 ggcattggcg gcggatttcc gttgctgcca aatgaaccga gtcgacacta gctgccgctt
     6541 ctcggctgtt gtggaacggc ccgtcatccg ctaggttccg cgcaaattgt gcggcgggcg
     6601 cgccggcgcg gccgcggtca gcgatcccgg atagcgaatg gcgaaggaag agcttctgga
     6661 atttcccggc gtcgtcacgg agctgctccc gaacgccacg ttccgcgtca agcttgaaaa
     6721 cgatcacgag atcatcgccc acaccgccgg acgcatgcgc aagaaccgca tccgcgtgct
     6781 tgccggcgac aaggtccttg tcgagatgac cccctacgac ctgaccaaag gtcgcatcac
     6841 ctaccgcttc aagtgatatc ggccgctgaa ttttccacgt catccagccg ggcccgcggc
     6901 gcgccggccg cgccgcgtcg ccccgcgagc gtgtacccgt gatcgggcgg ccgaaattcg
     6961 ttctcgcttc cggctcgccg cgccggctcg cgcttgtcaa ccaggccggc atcgagcccg
     7021 acgcgttgcg tccggccgac atcgacgaga caccgaaacg cggcgaattg ccccgcgcct
     7081 gcgccacgcg gctcgcgcgc aagaaggcgg aagtggcgct cgcaatggtg cgcgccgacg
     7141 aagagctcaa aggcgccttc atcctcgccg ctgacaccgt ggtcgccgtc ggccgccgca
     7201 tcctgcccaa ggcggagctg ctcgacgagg cggcgcaatg cctgcggctc ctctccggcc
     7261 gcaaccatcg cgttcacacc gcggtctgcc tggtgacgcc acgggagaca tttcgccagc
     7321 gccacgtgga gacgcgcgtg cgcttcaagc ggctgtcgga cgaggacatc gaagcctacc
     7381 ttgcctcggg cgaatggcgc ggcaaggccg gcgcctacgc ggcgcagggg atcgccggaa
     7441 ccttcatggt caaggtcgtc ggttcctatt ccaacatcat cgggctgccg ctctacgaga
     7501 cgatgacgct cctcggcggc gaaggctatc cgatccactt cggctggctc aacgtggtgt
     7561 gagcttggcg tcgtccggcc cccgtcccat atgttggccg atgcgtgctg ctcaacctcg
     7621 caaggcctgc ccgatctgcg gcgaaagcgc cgtgcaaagg ttccggccat tctgctcgcg
     7681 gcgctgcgcc gacgtcgacc tcaaccgctg gctctcgggc gtctacgcca ttccgatgcg
     7741 cgaagatgag gaagaggacg agcggcgtga cgacagcgcc gaggggcctc agtagacgat
     7801 ccgccgtgca ggccgaaggt ctcgtcggcc gagtgtcaac taagaccgct tagcagacca
     7861 acttacgcgg gacgggccga aagagcctca ttcaagcatg caatcagcgt gtggtcactg
     7921 aagggcttgt ccaaataacc gaccgctccg gcagcgagcg ctcgtcctcg cgtcttcacc
     7981 tcagggtacg ccgtgacaaa gatgaccggc aggtgat
//
LOCUS       DATMQB010000397         3821 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_173987, whole genome shotgun sequence.
ACCESSION   DATMQB010000397 DATMQB010000000
VERSION     DATMQB010000397.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3821)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3821)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3821
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_173987"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..441
                     /locus_tag="VNY79_11310"
     CDS             <1..441
                     /locus_tag="VNY79_11310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010973074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HWX73081.1"
                     /translation="IAKDGAKMVTAVACAQVPKITVVIGGSYGAGNYGMCGRAYSPRF
                     LFTWPNARISVMGGEQAASVLATVRRDNLEAAGKSWSEVEEEEFKQPIRDQYEAEGNP
                     YYATARLWDDGIIAPSEMRRVLALCFSAALNAPILDTKFGVFRM"
     gene            complement(518..748)
                     /locus_tag="VNY79_11315"
     CDS             complement(518..748)
                     /locus_tag="VNY79_11315"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73082.1"
                     /translation="MLPKFAVAGLAATAVIAATALMPTAASAGGRGGGANWPQYGTWN
                     FPAYTEMNCGYVRVNTYRQRQPGNGQWVYQCR"
     gene            884..1309
                     /locus_tag="VNY79_11320"
     CDS             884..1309
                     /locus_tag="VNY79_11320"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HWX73083.1"
                     /translation="MRKTITHIHWPDAPDLWMPYAPAIKVVGGTTVYLAGVTAAPVYH
                     HHPHRPQEFDAMPRGMAGQARAALENLKRGLEAAGASFTDVVTATRFVTDLSDQDALN
                     RVWAEYFGDAKPATTTVQVMRLATDPRCLVEINAVAVVD"
     gene            complement(1337..1540)
                     /locus_tag="VNY79_11325"
     CDS             complement(1337..1540)
                     /locus_tag="VNY79_11325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014762868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2905 domain-containing protein"
                     /protein_id="HWX73084.1"
                     /translation="MNVQRLLIALGLLILMAGIAWPILSRSGLGRLPGDVVIHRGNTF
                     YFPLVTCLLVSIALSVLFWPFNR"
     gene            1708..2409
                     /locus_tag="VNY79_11330"
     CDS             1708..2409
                     /locus_tag="VNY79_11330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HWX73085.1"
                     /translation="MTELSYRTALIVGVGAGLSASLARTFTKAGMQVALAARRAGELS
                     GLAKEVGGRAFACDATRHAEVAKLFGEVEAAFATPDVVVYNASYRTRGPFVELDPAEV
                     EKSISVSAFGGFLVAQEAVKRMLPHKHGAILFTGASASVKGYAQSAPFAMGKFALRGL
                     AQSLARELSPQGIHVGHVVIDGGIRNPGRSEPPDRPDSMLDPDAIAHAYLYLLQQPRS
                     AWSWEIELRPWVERF"
     gene            2451..3011
                     /locus_tag="VNY79_11335"
     CDS             2451..3011
                     /locus_tag="VNY79_11335"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73086.1"
                     /translation="MPKMLTRAAMLVLAFVAVASADLQARSQRPQQRQPEPAPAAAPA
                     DKRDSLVPASATFNSRPYWQALAQCGGIYFKLNVFYTDAAVRARVVKPDPKANAEYTK
                     ELNEAIKTATRYFEGAERFLIADRGMERSDAVLTYDAQSRAAGERLKSIDAALAAAKT
                     CPALYQSCRDTYPKRCAEPLAPAAGH"
     gene            3069..3536
                     /locus_tag="VNY79_11340"
     CDS             3069..3536
                     /locus_tag="VNY79_11340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73087.1"
                     /translation="MRKYFAGLVIAALLGAPQANAEEGSTQQATSSASEPYQPGLGDI
                     MARQQMRHMKLWFAGRARNWPLADYEVDRLKGGFDEVERLLGGDTVEKAIGGSIAALE
                     KAVEAKDRPAFTRAFDELTAGCNGCHQTLDHAYIRIQRPSWYPYSDQSFLPEK"
BASE COUNT          697 a         1249 c         1242 g          633 t
ORIGIN      
        1 atcgccaagg acggcgccaa gatggtcacc gccgtcgctt gcgcgcaggt gccgaagatc
       61 accgtcgtga tcggcggctc ctacggcgcc ggcaattacg gcatgtgcgg ccgcgcctac
      121 agcccgcgtt tcctgttcac ctggccgaat gcgcgcatct cggtgatggg cggcgagcag
      181 gcggcgagcg tgctcgcgac cgtgcggcgc gacaatctcg aggccgccgg gaaaagctgg
      241 tcggaggtcg aggaggagga attcaagcag ccgatccgcg atcaatatga agcggaaggc
      301 aacccctact acgccaccgc gcggctatgg gacgacggca tcattgcccc gtccgagatg
      361 cgtcgggtgc tggcattgtg cttttcggcg gcactcaacg cgccgatcct ggacacgaag
      421 ttcggggtgt tcaggatgtg aaacgtctcg cagcgagcga cgtgcgtcgg caggcgccaa
      481 cgcacgtcga agagtttcta caattggtct gcaaaatcta gcgacactga tagacccatt
      541 ggccgttgcc gggctgcctc tggcggtagg tattcacccg cacgtagccg caattcatct
      601 cagtgtaagc cggaaagttc caagtcccgt actgcggcca atttgcaccg ccaccgcgcc
      661 cgccggcgct cgcggcggtc ggcatcaggg cggttgcggc gatgacggcg gtggcggcca
      721 agccggcgac ggcgaatttg ggcaacatgg ctgtctttct cctcctctgc acatcggttg
      781 ctgccgatgc atgcatgggg aaatgggtcg cccctcgtcg ttgtcaagcc gacatgacgt
      841 ccgctcggag caggtgatag atcaggcaaa aaggaagcga agcatgcgca aaaccatcac
      901 acatatccat tggccggacg cgcctgatct gtggatgccg tatgcaccgg caatcaaggt
      961 cgttggcggg acgacggtct atctcgccgg cgtcaccgcc gcgccggtct atcatcatca
     1021 tccgcatcgg ccgcaggagt tcgacgccat gccgcgcggc atggccgggc aggcgcgcgc
     1081 ggcgctcgaa aatctcaagc gcgggctcga agcagcaggc gcaagcttca ctgacgtggt
     1141 gaccgccacc cggttcgtca ccgatctttc cgatcaagac gcactcaacc gcgtttgggc
     1201 cgaatatttc ggcgatgcca agccggcgac gacaaccgtc caggtgatgc gcctcgccac
     1261 cgatccgcgt tgccttgtgg aaataaacgc ggtcgcggtg gtcgattgag cgatcgcggt
     1321 cgggcgcgaa gctcttttag cggttgaacg gccagaacag gacgctgagc gcgatgctga
     1381 caaggaggca ggtgaccagc gggaagtaga acgtgttgcc gcggtggatc acgacgtcgc
     1441 cgggcagccg gccgagcccg ctgcgcgaca agatcggcca cgcgatcccg gccatcagga
     1501 tcaggagccc aagcgcgatc aggaggcgct gcacgttcat cgccgcaaga cgtggggaag
     1561 tgaacgcgag cgatcaaggg tctcgccgcg cgcaggttct acggcgttcg cgcggccgcg
     1621 ccccgccgct tgacgcggcg gcgttttcgg ccctcttgtc ggcgtccaac agtctacacg
     1681 aagggtggga gtgaagggcg gagagtcatg accgagctat cctaccggac ggcactcatt
     1741 gtcggcgtcg gcgcgggcct ttccgcttcg ctggcgcgca cgtttacgaa ggccggcatg
     1801 caggtcgcgc tcgccgcgcg ccgtgcgggc gaactgtccg gtcttgccaa ggaggtcggc
     1861 ggccgagcgt tcgcgtgcga cgcgaccaga cacgcggagg tcgccaagct tttcggcgag
     1921 gtcgaagccg cgttcgccac gccggacgtc gtcgtctaca acgcgagcta ccgcacgcgc
     1981 ggcccgttcg tggaactcga tcccgccgaa gtcgagaagt cgatttcggt cagcgccttt
     2041 ggcggcttcc tggtggcgca ggaggcggtc aagcgcatgc tgccgcacaa gcacggcgcg
     2101 atcctgttca cgggcgcctc ggcaagcgtg aagggctacg cccagtcggc gccgttcgcg
     2161 atgggcaagt tcgcgttgcg cggtctcgcg cagagtctcg cgcgcgagct atcgccgcaa
     2221 ggcatccatg tcggccacgt cgtgatcgac ggcggtatcc gcaacccggg ccggagcgag
     2281 ccgccggacc ggcccgacag catgctcgat cccgacgcca tcgcgcacgc ttatctctac
     2341 ctcctgcagc agccgcgcag cgcctggtcg tgggagatcg agctgcgccc ctgggtggaa
     2401 agattttgag tcctttgaat cccgcagcga gccccattta tactttcgcc atgccaaaga
     2461 tgctcaccag ggcggctatg ctcgtgctgg ccttcgttgc cgtcgcaagt gcggatctgc
     2521 aggcgcgaag ccagcgcccg cagcaacgcc agccggagcc cgcgcctgct gcagcgccgg
     2581 ccgacaagcg cgacagcctc gtgccggcgt cggcgacctt caacagccgg ccctattggc
     2641 aagcgttggc ccagtgcggc ggcatctatt tcaagctcaa tgttttctac accgatgccg
     2701 cggtgcgcgc ccgcgtcgtc aagcccgatc ccaaggccaa tgccgagtac acgaaggaac
     2761 tcaacgaggc gatcaagacc gccacccggt acttcgaggg tgccgagcgt ttcctgatcg
     2821 ccgaccgcgg gatggaacgc tccgacgcgg tcctcaccta cgatgcgcaa tcgcgcgccg
     2881 cgggcgaacg gctcaagagt atcgacgcgg cgctcgcggc ggcaaaaacc tgccccgcgc
     2941 tttatcagtc atgccgggat acctatccca agcgatgcgc cgagccgctc gcgccggcag
     3001 ccgggcattg aaggtagcgt gcttcaaagg aagcgtgcat ccgttctcgc gccacccagg
     3061 agccttccat gcggaaatac tttgccggcc tggtcatcgc ggcactcctc ggcgcgccgc
     3121 aagcgaacgc ggaggaggga tccacccagc aggctacgtc ctcggcgagc gagccctacc
     3181 aacccggcct cggggacatc atggcgcgtc agcagatgcg ccacatgaaa ctctggtttg
     3241 cgggtcgcgc ccgcaactgg ccgctggccg actacgaagt cgaccggctc aagggcggtt
     3301 tcgacgaggt cgagcggttg ctcggcggcg atacggtgga gaaggcgatc ggcggttcca
     3361 tcgccgctct ggagaaggcc gtcgaggcca aggaccggcc cgccttcacg cgcgccttcg
     3421 acgaactcac cgccggttgc aacggatgcc atcagacgct cgatcacgcc tacatcagga
     3481 ttcagcgccc gtcgtggtac ccttacagcg atcagtcctt cttgccggag aaatagaaaa
     3541 ggcgcggccg gagagcgatt gttcccgccg ttgcggtatc ggaacacgcc tcgcgtccgc
     3601 gtcaacgcgc cgcggcggcg acacatcggc tgcacatttg cggcgccata tctacgccgc
     3661 caccacgatg gttgccgtca aacaggaggt ccgacgatga catatcgcgt ctattccggt
     3721 ccgcgcggct cgcaatcgat ctcgcccctc gagaaggatc gccacctgtt caaggaattc
     3781 agcatgctcg acgaggcaat gagctgggcg cgccacatca a
//
LOCUS       DATMQB010000398         8664 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3598938, whole genome shotgun sequence.
ACCESSION   DATMQB010000398 DATMQB010000000
VERSION     DATMQB010000398.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8664)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8664)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8664
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3598938"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..699
                     /locus_tag="VNY79_11345"
     CDS             <1..699
                     /locus_tag="VNY79_11345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX73088.1"
                     /translation="ALKKRVEPLARDVGGIVVGDCDVTESKSIDAAFAAVRSAWGALD
                     FLVHAIAFSDKAQLDGRYVDTTQENFNKTMLVSCYSFTSIAQRAEKMMPNGGAMLTLT
                     YYGAEKWMPHYNVMGVAKSALETSVRYLAADLGVKNIRVNAISSGPIKTLAASGIGDF
                     RYILKWNEYNAPLRRNVTIEEVGEAGVYLLSDMSRGVTGEVHHVDAGYHIVGMKHPDA
                     PDITVGNNGGADKD"
     gene            827..1228
                     /locus_tag="VNY79_11350"
     CDS             827..1228
                     /locus_tag="VNY79_11350"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73089.1"
                     /translation="MIFPPGSQWRAGERSRAETSSLALALKLAAAGSKPGRCHETPLR
                     RLANFEVDGAHGPNTRLVLASLLRHLLLLLLLRRHGLFPFHLDPTAGLSSSFAGVVSD
                     TLGLRPPDRRKRCHSTSETAMEKMQIIVIFP"
     gene            1473..2597
                     /gene="aroC"
                     /locus_tag="VNY79_11355"
     CDS             1473..2597
                     /gene="aroC"
                     /locus_tag="VNY79_11355"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004107 - chorismate synthase activity
                     [Evidence IEA];
                     GO_process: GO:0009073 - aromatic amino acid family
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HWX73090.1"
                     /translation="MSFNTFGHSFRVTTFGESHGPAIGCVVDGCPPRIALDEADIQPY
                     LDRRRPGQSRFTTQRQEPDTVKILSGVFTDEATGTQVTTGTPIALLIDNVDQRAKDYA
                     DIKDKYRPGHADYTYDVKYGLRDYRGGGRQSARETATRVAAGAIARKVVPGLKVRGAL
                     VQMGPHAIDRTRCDWAEVERNPFFCPDAERVAFFADYLDGVRKRGSSVGAVIEIVAEG
                     VPPGLGAPIYGKLDGDLAAALMSINAVKGVEIGAGFAAAALSGEENADEMRMGNDGQP
                     IFLSNNAGGILGGISTGQPVIARFAVKPTSSILTARRTVDRYGNETDISTTGRHDPCV
                     GIRAVPVGEAMVACVIADHYLRHRGQVGETPHWPVPQPAR"
     gene            2748..3842
                     /gene="ribB"
                     /locus_tag="VNY79_11360"
     CDS             2748..3842
                     /gene="ribB"
                     /locus_tag="VNY79_11360"
                     /EC_number="4.1.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008686 -
                     3,4-dihydroxy-2-butanone-4-phosphate synthase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3,4-dihydroxy-2-butanone-4-phosphate synthase"
                     /protein_id="HWX73091.1"
                     /translation="MSDAHQRIRAAVAAFGRGELVIVADDDDRENEGDLFVAAALCTP
                     EKMAFIIRHTSGIVCAPVAPEEARRLHLDPMVARNDAPLGTAFTVSVDVRHGLTTGIS
                     AEERANTVRALANGNMGAGDFVRPGHVFPLVAKDGGVLMRSGHTEACVDLCRLAGLPP
                     VGVLAELMNDDGTVMHGADIAAFAERHKLQRVSIADLIAFRQAREKLIERVGEFPVES
                     EIGTLAGYAFQTPFDPFYHMAFVHGRIGDGRNVLARLHRANLILDVFGGAKAIHRTLD
                     RFKAEGRGVLVVLRDGAAGVPVVSIPKSDETPSGEARIRQWREVGLGAQILKDLGVTS
                     IRLLSFSRHMTYVGLSGFGIEIVGTEPVEG"
     gene            3889..4488
                     /locus_tag="VNY79_11365"
     CDS             3889..4488
                     /locus_tag="VNY79_11365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020173837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HWX73092.1"
                     /translation="MNRIVSRIAALAAIVVAGLTLSACGYNTIPTLEEQAKARWADVQ
                     NQYQRRADLIPNLVETVKGYATQEKSVLTAVIEARAKATQVKVDASQLTDPEKVKAFQ
                     DAQNQLTGALGRLLAVSENYPDLKSNANFLALQSQLEGTENRIAVARRDYIEAVRGYN
                     TALRTFPTVIWAKTAFSGNKPMAEFTATEGSDKPPQVKF"
     gene            4488..5300
                     /locus_tag="VNY79_11370"
     CDS             4488..5300
                     /locus_tag="VNY79_11370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009490850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HWX73093.1"
                     /translation="MDHRRHFLGGGTRAAPAACAATLTFVLSLALTAFAFDFPALSGR
                     VVDQANIMSPVTRSDVEAKAKDLEDKSGIQLVVATVKSLQGSDIETYANQLFRFWKLG
                     EAKKNNGVLLLVAPAEHKVRIEVGYGLEGTLTDALSSVIITSAITPRFKANDFSAGIE
                     RGVDGIIAVLTTDAAEWHRKAKVRSDDPTVAFGALFPALLLVVVIFFVWYLIHNANGP
                     PGSRGGRSVFVPYGGSWGSGGSGWGGGGGFSGGGGFSGGGGSSGGGGASGSW"
     gene            5300..5905
                     /locus_tag="VNY79_11375"
     CDS             5300..5905
                     /locus_tag="VNY79_11375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018264178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TPM domain-containing protein"
                     /protein_id="HWX73094.1"
                     /translation="MLTKEDHAAIAAAIRAAEQHTSAQIVCVLARASSRYAHVPIMWA
                     SLLALLAPWPLIYFTPWSVQQIFLVQLAVFLVAGLLFSWMPLRFALVPRAVRRTRAHR
                     IALEQFVIRRVAHTKNRMGVLIFVSLGERYARIIADEGLAQKVHSAEWQSAIDALTGH
                     MHDGRIVQGFTAAIERCTAVLAAHAPPDGSADGLPDRLYVM"
     gene            5959..7077
                     /gene="ald"
                     /locus_tag="VNY79_11380"
     CDS             5959..7077
                     /gene="ald"
                     /locus_tag="VNY79_11380"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003612274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0000286 - alanine dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0006522 - alanine metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HWX73095.1"
                     /translation="MLVGVPKEIKDNEYRVGAVPSTVRELTDKGHGVIVEAGAGLGAG
                     LPDADYQAAGAEIVGEADGVYGRAELIVKVKEPLVAERKKLRRGQVLFAYLHLAPDRA
                     QTEDLMKAGVTAIAYETVTSAQGALPLLTPMSEVAGRMAPHVGAHCLEKENGGRGVLL
                     AGVPGVSPASVVILGGGVAGTNAALIASGMGADVAVLDRNPEALRRIAAQFGNRVRTL
                     FSTRDVVELLCRRADLVIATVLVPGATAPKLISAQTVKAMKPGSVIVDVAIDQGGCSE
                     TSRPTTHSHPTYVVDDVVHYCVTNMPGAVARTSTFALSNMTTSFVLALADKGWRRALS
                     EDPHLLKGLNVHDGRVTYRAVADALELPYTHADHALRL"
     gene            7155..7922
                     /locus_tag="VNY79_11385"
     CDS             7155..7922
                     /locus_tag="VNY79_11385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019904125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HWX73096.1"
                     /translation="MPEHDIDQRDRTIRRDRRAVLLGGALVLGANLWPAHAPAQTNSG
                     AKMRIGIIGSGHIGGTIGGLWVKAGHAVLFSSRHPDELKDLVAGLGAQAQAGTVEQAI
                     AFSDVLFIAVPYGAMPQIGQDYGAGLKGKIMLDAGNAVPARDGNTIFEEVERDGIGVV
                     SQKYLPGTRLVRAFNTLNYKIFESEANRPDPKLAVPIAGDGPEAVQVAAGLVRDAGFD
                     PVVVGKLVDAKRFQRGTPGYGQNVTAAEFRQKLSLTL"
     gene            7919..>8664
                     /locus_tag="VNY79_11390"
     CDS             7919..>8664
                     /locus_tag="VNY79_11390"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HWX73097.1"
                     /translation="MKAVPRWVSWAMPATPQERAAALWSFAYFFTLLAGYYVLRPLRD
                     QMGIAGGVKTLPWLFTATFAVLIVAQPVYGALVAKLPRARFIPIVYHFFVANLALFWL
                     ALTLGVAPVIVARVFFVWVSIFNLFAVAVFWSFMADLFTAEQGKRLFGFIGAGGTAGG
                     LLGPLITIGLSVPFGAVNLLIAAAVLLELAVFCVHRLERAATAQAAARGLVDAGPQRV
                     GGSAFAAVPEVLRSPYLIGVGAWVSLLSFCA"
BASE COUNT         1446 a         2823 c         2842 g         1553 t
ORIGIN      
        1 gcgctcaaga aacgcgtcga gccgcttgcc cgcgatgtcg gcggcattgt ggttggtgat
       61 tgtgacgtca ccgaatccaa gagcatcgat gccgccttcg cggccgtgcg ctcggcctgg
      121 ggcgcgctcg actttctagt ccacgccatc gccttctcgg acaaggctca gctcgacggc
      181 cgctacgtcg ataccacgca ggagaacttc aacaagacca tgctggtgag ctgctactcg
      241 ttcacctcga tcgcgcagcg cgccgagaag atgatgccga acggcggcgc catgctcacg
      301 ctcacctatt acggggcgga aaagtggatg ccgcactaca acgtcatggg cgtcgccaaa
      361 tccgccctcg aaacctcggt gcgctatctc gccgccgacc tcggcgtgaa gaacatccgc
      421 gttaacgcca tctcgtcggg gccgatcaag acgctcgcgg cttccggcat tggcgacttc
      481 cgctacatcc tcaaatggaa cgagtacaac gcgccgttgc gccgcaatgt gaccatcgag
      541 gaggtgggcg aggccggcgt gtatcttctc tcggacatgt cgcgcggcgt taccggcgaa
      601 gtgcaccacg tggatgccgg ctatcacatc gtgggcatga agcaccccga cgcgccagac
      661 atcacggtcg gcaataacgg tggcgccgac aaggactgag gctcaccgcg cggcggcggc
      721 ccgcgcatcg cgctttccga agtctcagcg gttgaaagcg ttcggttggt ccctgcgcct
      781 gctggctggc acggacagcg tggctcggag ccgataccct gcggcgatga tctttccgcc
      841 cggttcccaa tggcgcgccg gggagcgttc ccgggctgaa acatcgagcc tggcgttggc
      901 gctgaaatta gcagcggccg gatcgaaacc cggccgctgt cacgaaacac cgctcaggcg
      961 cctcgcgaat ttcgaagtcg atggcgcgca cggccccaat acgaggctcg tgctcgcatc
     1021 gttacttcgc catcttcttc ttcttcttct tctgcgtcgc catggcttat ttccttttca
     1081 tctggatcct acggcagggt tgagttcaag ctttgcgggc gttgtctcgg ataccctggg
     1141 ccttcgcccc cctgaccgcc gcaaacgatg ccacagcacg agcgaaaccg caatggaaaa
     1201 aatgcaaata atcgtgattt ttccgtaggt taacggatat tcagcttgtc attaaccgcc
     1261 gttcagcgag atgaatgcga tatgaatgga ggcccggtgt cgcggccaat tttcaggacg
     1321 cggttagcag acgctttgcc atgccgcgcg gtatgaacca attgcagtga cgcgccgcgg
     1381 ctgcgggcgc gcatttgacc cgctggaacc cgcgggctac gaagcccgcc gcactttcat
     1441 ttagcggcat tgaaacgtga tttgagcgat ccatgtcgtt caacacattc ggtcattcct
     1501 tccgtgtcac caccttcggc gaaagccacg ggccggcgat cggttgcgtg gtcgatggct
     1561 gcccgccgcg aattgcgctc gacgaggccg acatccagcc ctatctcgat cggcgccggc
     1621 ccggccagtc gcggttcacc acgcagcgcc aggaacccga cacggtcaaa atcctctccg
     1681 gcgtgttcac ggacgaggca accggcacgc aggtgacgac cggcaccccg atcgcgctcc
     1741 tcatcgacaa cgtcgaccag cgcgccaagg actatgccga catcaaggac aaatatcgtc
     1801 ccggccatgc cgactacacc tatgacgtca aatatggctt gcgcgactat cgcggcggcg
     1861 gccgccagtc ggcacgcgag acggcgacgc gcgtcgccgc cggggcgatc gcgcgcaagg
     1921 tcgtgccggg cctcaaagtg cgcggcgcgc tcgtgcagat gggtccgcat gcgatcgatc
     1981 ggacgcgctg tgactgggcc gaggtcgagc gcaatccgtt cttctgccct gacgcggaaa
     2041 gggtggcgtt cttcgccgac tatctcgacg gcgtgcgcaa gcgcggctct tccgtcggcg
     2101 cagtcatcga gatcgtagcc gagggcgtgc cgcccggcct tggcgcgccc atctacggca
     2161 agctcgacgg cgacctcgcc gccgctttga tgagcatcaa cgccgtcaag ggcgtcgaga
     2221 tcggcgccgg tttcgccgcg gcggcgctca gcggcgaaga gaacgccgac gagatgcgca
     2281 tgggcaacga cggccagccg atctttctca gcaacaatgc cggcggcatc ctcggcggca
     2341 tttccaccgg ccagccggtg atcgcgagat ttgcggtcaa gcctacgtcg tcaatcctta
     2401 ccgcgcggcg caccgtcgac cgctacggca acgagaccga catttccacc accggccgcc
     2461 acgacccttg cgtcggcatc agggccgtgc cggttggcga agccatggtg gcgtgcgtca
     2521 tcgccgatca ctatctgcgc catcgcggcc aggtcggcga gacgccgcat tggccggttc
     2581 cgcagccggc gcgctgaagg caagaacggg ggcgattcat gactgcagca gaacgtcaac
     2641 gcgcggagcg aggcggcaaa gtcgtcaagc ttcggccgca tgaagtccga tggcttggcg
     2701 tcgacggcaa tgatgcttca cgctgatggg atagcaacag cgacccgatg agcgacgccc
     2761 accaacgcat ccgggctgcc gtggccgcct tcgggcgcgg tgagcttgtc attgtcgccg
     2821 acgacgacga ccgcgagaac gagggcgatc tcttcgtcgc cgcggcgctt tgcacgccgg
     2881 agaagatggc gttcatcatc cgccatacgt ccggcatcgt ttgcgcaccg gtcgccccgg
     2941 aagaggcgcg gcggcttcat ctcgatccga tggtggcccg caacgacgcg ccgctcggca
     3001 ccgccttcac agtctcagtc gatgtccgcc atggcctgac caccggcatc tcagcggaag
     3061 agcgagccaa cacggtgcgg gcgctcgcca acggcaatat gggcgcgggc gacttcgtgc
     3121 gtcccggcca tgtctttccg ctggtcgcca aggacggcgg cgtgcttatg cgctccggcc
     3181 acaccgaagc gtgcgtcgat ctctgccgcc tggccggctt gccgccggtc ggcgtgcttg
     3241 ccgagctgat gaatgatgac ggcacggtca tgcacggagc agacatcgcc gctttcgccg
     3301 agcgccacaa gttgcagcgc gtctccatcg ccgacctgat cgcctttcgc caggcgcgcg
     3361 agaaactgat cgagcgggtc ggcgagtttc ccgtcgaatc cgagatcgga acgctggccg
     3421 gctatgcctt tcagacgccg ttcgatccgt tctaccacat ggcattcgtt catggccgca
     3481 tcggcgacgg gcggaacgtg ctggcgcgcc tgcatcgcgc caatctgatc ctcgacgtct
     3541 tcggcggggc caaggcgatc caccgcacgc tcgaccgctt caaggccgag ggcagggggg
     3601 tgcttgtggt cctgcgcgac ggtgccgccg gcgtgccggt cgtctccatt ccgaagtcgg
     3661 atgaaacacc gtccggcgag gcgcgcatca ggcaatggcg tgaggtcggc ctcggcgcgc
     3721 agattctcaa ggacctcggc gtgacttcga tcaggctttt gagcttttcc cggcacatga
     3781 cctatgtcgg gctctccggc ttcggcatcg agattgtcgg aaccgagccg gtcgagggat
     3841 gacgttgcgg cacgcgaaca atgtgttgag aaacagacga ggcgcacaat gaacaggatc
     3901 gtttcccgta tcgccgcgct ggcggcgatt gtggtggccg gcctcacgct ctcggcgtgc
     3961 ggctacaata ccattccgac gctcgaggag caggcgaagg cgcgctgggc cgatgtgcag
     4021 aaccagtatc agcgccgcgc cgatctcatc cccaatttgg tggagacggt gaaaggctac
     4081 gccacgcagg agaagagcgt gctcacagcc gtcatcgagg cgcgggccaa ggcgacgcag
     4141 gtcaaggtcg acgcctcgca gcttaccgat ccggaaaagg taaaggcctt ccaggacgcc
     4201 caaaaccagc tcaccggagc gctcggtcgg ctgctcgcgg tgtcggagaa ttatcccgat
     4261 ctcaaatcca acgccaactt cctggcgctg caatcgcagc tcgaaggcac cgagaaccgc
     4321 atcgcagtgg cgcggcgcga ctacatcgag gcggtgcgcg gctacaacac cgcgttgcgt
     4381 acattcccga ccgtgatctg ggcgaagact gcgttttccg gcaacaagcc gatggccgaa
     4441 ttcacggcga cagaaggctc ggacaaaccg ccacaggtga agttctgatg gatcaccggc
     4501 gccactttct tggcggagga acaagggcgg cgcccgcagc gtgcgccgcg accctcacgt
     4561 tcgttctctc gctggcgctg accgcttttg ccttcgactt tccggcgttg agcggccgcg
     4621 tggtcgatca agcgaatatc atgtcgccgg tgacccgcag cgacgtcgaa gcgaaggcga
     4681 aggatctcga ggacaaatcc ggcatccagc ttgtcgttgc caccgtcaaa tcactgcagg
     4741 gcagcgacat cgagacctat gccaatcagc tcttccgctt ctggaagctt ggcgaagcca
     4801 agaagaacaa tggcgtgctg ctgctcgttg cgccggcgga gcacaaggtg cgcatcgagg
     4861 tcggctatgg gctcgaaggc acgctgaccg acgccttgag ctcggtcatc atcaccagcg
     4921 cgatcacgcc gcgcttcaag gcgaacgact tctcggccgg catcgagcgc ggcgtcgacg
     4981 gcatcatcgc cgtgctcacc accgacgccg cggaatggca ccgcaaggcg aaggtccgat
     5041 ccgacgatcc gacggtggct ttcggcgctc tgtttccggc tctgctgttg gtggtggtga
     5101 tctttttcgt ctggtacttg atccataacg ccaacggccc gccgggcagc aggggcggac
     5161 gcagcgtctt cgtgccttac ggcggctcct ggggatcggg gggatcgggc tggggcggcg
     5221 gtggcggatt ttccggcggc ggtggctttt ccggcggggg cggctcgtcg ggtggcggcg
     5281 gcgcatccgg gagttggtga tgctgaccaa ggaggatcac gccgccatcg cagccgcgat
     5341 ccgcgcagcg gagcagcata ccagcgcgca aatcgtctgc gtgctcgccc gcgcctcgtc
     5401 gcgctatgct cacgtgccga tcatgtgggc gagtttgctc gcgctgctcg caccgtggcc
     5461 gctgatctat ttcacgccgt ggagcgtgca gcagattttc ctcgttcagc tcgcggtctt
     5521 cctcgttgcc gggcttctct tctcctggat gccgttgcgc tttgcgctgg tgccgcgcgc
     5581 ggtgcggcgc acgcgggcgc accgcatcgc gctcgagcag ttcgttattc gccgcgtcgc
     5641 ccacaccaag aaccgcatgg gcgtgctcat cttcgtttca ctcggcgaac gctacgcccg
     5701 catcattgcc gacgagggct tggcgcaaaa agtgcatagt gcggagtggc agtccgcgat
     5761 cgacgccctg accggccaca tgcacgacgg acgcatcgtg cagggcttta ccgccgcaat
     5821 cgagcgctgc acagccgtgc tcgccgcgca cgctccgccc gacggatcgg cggatggttt
     5881 gccggatcgc ctctacgtga tgtagcgcag gcgcttttcc cgtccccgaa aggacgaggg
     5941 agcatagcgg ggatggccat gctggtcggc gtgccgaagg aaatcaagga caacgaatac
     6001 cgggtcggcg ccgtgccatc gacggtgcgc gagctcaccg acaagggtca cggcgtcatc
     6061 gtcgaggcgg gcgcgggatt gggagccggc ctcccggatg ccgattacca ggctgcgggc
     6121 gccgagatcg tcggcgaggc cgatggcgtc tacggccgtg ctgagctgat cgtgaaagtg
     6181 aaggagccgc tggtggcgga acgcaagaag ctgcggcgcg gccaggtgct gttcgcgtat
     6241 ctgcatctcg cgcccgaccg cgcgcagacc gaggatttga tgaaggcggg cgtcaccgcc
     6301 atcgcctacg agacggtgac cagcgcgcaa ggcgcgttgc ctctgctcac gccgatgtcg
     6361 gaggtcgccg gccgcatggc gccgcacgtc ggcgcccact gcctggaaaa ggagaacggc
     6421 gggcgcggcg tgctgcttgc cggcgtgccc ggtgtttcgc cggccagtgt ggtcatcctc
     6481 ggcggcgggg tggccgggac caacgcggcg ctgatcgcct ccggcatggg cgccgacgtc
     6541 gcggtgctcg accgcaaccc ggaggcgctg cgccggatcg ccgcgcagtt cggcaatcgg
     6601 gtgcgtaccc tgttctcgac gcgcgacgtg gtcgagctgc tttgccgccg cgccgatctg
     6661 gtcatcgcca cagtgctggt gccgggcgca accgcgccga agttgatctc ggcgcagacg
     6721 gtgaaggcga tgaagcccgg ttcggtgatc gtcgacgtcg ccatcgatca gggcgggtgc
     6781 tccgaaactt cgcggccgac gacgcattcg catccgacct acgtggtcga cgacgtcgtg
     6841 cactattgcg tgaccaatat gccgggcgcg gtggcgcgca cttcgacctt cgccctgagc
     6901 aacatgacta cgtctttcgt gctcgcgctt gccgacaagg gctggcggcg ggcgttgagc
     6961 gaggatccgc atcttctcaa ggggctcaac gtgcacgacg gccgcgtcac ctaccgcgcc
     7021 gtcgccgacg cgctggagct tccctatacg catgcggacc atgcgcttcg gctctgaccg
     7081 ggacccctga cgcgcgttat attgttgggc gagcccacga cgcatgcgcg atgcgcaaat
     7141 gccaggaggt tgccatgccc gaacatgaca ttgaccagcg tgaccgcacg atcaggcgcg
     7201 accgccgtgc cgtgcttctc ggcggcgcgt tggtgcttgg cgcgaacctg tggccggcgc
     7261 acgctccggc gcagacaaac agcggcgcca agatgcgcat cggcatcatc ggctcgggtc
     7321 atatcggcgg cacgatcggt ggcctgtggg tcaaggccgg ccacgccgtg ctgttctcct
     7381 cgcggcatcc cgacgagctc aaggacctgg tggcgggact tggagcgcag gcccaggccg
     7441 gcacagtaga acaggcgatc gcattcagtg acgtgctgtt catcgccgtg ccgtacggcg
     7501 ccatgccgca gatcggccaa gactacggcg cggggctcaa gggcaagatc atgctcgacg
     7561 ccggcaatgc cgttccggcg cgcgacggca acacgatttt cgaggaggtc gagcgcgacg
     7621 gcatcggcgt cgtttcgcag aaatatctgc cgggcacgcg gctggtgcgc gccttcaaca
     7681 cgctcaacta caagatcttc gaaagcgagg cgaaccggcc cgatccaaag ctcgcagtcc
     7741 cgatcgcggg cgacggtccc gaagcagtgc aggtcgcggc cgggctcgtt cgcgacgccg
     7801 gtttcgatcc tgtggtggtc ggtaaactcg tcgacgcgaa acggttccag cgcgggactc
     7861 cgggctatgg ccagaacgtg acggcggccg aattcaggca gaagctgtcg ctgacgctat
     7921 gaaggcggtg ccgcgctggg tctcctgggc gatgccggca acgccgcagg agcgggcggc
     7981 agcgctgtgg tcgtttgcgt atttcttcac gctcctcgcc ggctattacg tgctgcgacc
     8041 gctgcgcgac cagatgggca tcgccggcgg cgtcaagacc ctgccgtggt tgttcaccgc
     8101 caccttcgca gtgctcatcg tggcgcaacc ggtttacggt gccctggtgg cgaaactgcc
     8161 gcgcgcgcgc ttcatcccca tcgtctacca tttcttcgtc gccaatcttg cgctgttctg
     8221 gctggcgctg acgctcggtg tcgcgccggt gattgtcgcg cgggtgttct tcgtctgggt
     8281 gagcatattc aatctctttg cggtcgccgt gttctggtcg ttcatggccg atttgttcac
     8341 ggccgagcag ggcaaacgcc tgttcggctt catcggcgcc ggcggcacgg cgggcggctt
     8401 gctcggtccg ctgatcacca tcggcctttc ggtgccgttc ggcgcggtga acctcctgat
     8461 cgccgccgcg gtgctgctgg aactggcggt gttctgcgtc caccggctcg agcgcgcggc
     8521 gaccgcgcag gcagcagcgc gagggcttgt tgacgccggc ccgcagcgcg tcggcggctc
     8581 ggcctttgcg gcggtccccg aggtgctccg ctcgccttac ctcatcggcg tcggcgcctg
     8641 ggtcagcctc ctctccttct gcgc
//
LOCUS       DATMQB010000399         6563 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1125252, whole genome shotgun sequence.
ACCESSION   DATMQB010000399 DATMQB010000000
VERSION     DATMQB010000399.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6563)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6563)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6563
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1125252"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1077
                     /locus_tag="VNY79_11395"
     CDS             <1..1077
                     /locus_tag="VNY79_11395"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HWX73098.1"
                     /translation="RKHTGLLSLDVEQYYNEIVEGVAAGRTLKWTLPAGSGRTFYSTN
                     QPTPDGGWVSTHEDVTDRVRLQKEHDHASDQQRRRGAIDTAIAAFRTKMETLLKTFGD
                     SAAAMKSTAVTLSAASNHTSQCAESAVAASHEASTGVRTAAGAADELSSSIAEIARQI
                     TQTNTVVRMAVDEAQATNGEMNTLAMTTQKIGDIVKLIQTIAEQTNLLALNATIEAAR
                     AGEAGRGFAVVASEVKSLAVQTGKATEAIVGQILTVQSSTASAVESIRRITQRMQEIA
                     HYATGVAASIEEQSAATSHISSNVASAAQATQSMGTVLDDVAGAATQTSMSAEVVLDA
                     SRSVEAAIADLRGHVEAFLAGVAA"
     gene            complement(1118..3910)
                     /gene="ppdK"
                     /locus_tag="VNY79_11400"
     CDS             complement(1118..3910)
                     /gene="ppdK"
                     /locus_tag="VNY79_11400"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050242 - pyruvate, phosphate dikinase
                     activity [Evidence IEA];
                     GO_process: GO:0015976 - carbon utilization [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HWX73099.1"
                     /translation="MVKSRSKASHRPEKKSPRRAVKAKDRQKGRTTAPSAAPMGKWVY
                     AFGGGKAEGRAGMRNLLGGKGAGLAEMAHLGVPVPPGFTITTEVCTHFYQNGKTYPKE
                     LKAKVDAALAEVGRITGKKFGDEENPLLISVRSGARASMPGMMDTVLNLGLNDATVAA
                     LAKNSGDRRFAYDSYRRFVSMYADVVLGIGHHHFEEVLDEHKERNGYTLDTDLEAADW
                     EELVGVFKQRIEEETGKAFPQDPQAQLWGAIGAVFGSWMNPRAITYRRLHGIPESWGT
                     AVNVQAMVFGNMGETSATGVAFTRNPSTGEKKLYGEFLINAQGEDVVAGIRTPQEITE
                     AARQEAGSDKPSMEAALPQAFAELKRIYAALERHYRDMQDLEFTVEQGKLWMLQTRSG
                     KRTAGAALRIAVELAQEKLISKEEAVTRVDPAALDQLLHPTIDPAAERNVIATGLPAS
                     PGAASGEIVFSSEDAEALSNQGRKVILVRVETSPEDIHGMHAAEGILTTRGGMTSHAA
                     VVARGMGKPCVAGAGMLRVDYRTQTMSAGGATMKKGEILTIDGSTGQVLVGKVPMSEP
                     ELTGEFATLMQWADGARKLKVRANADTPADARTAIKFGAEGIGLCRTEHMFFDEDRIQ
                     AMREMILAEDEKTRRAALAKLLPMQRNDFVELFKIMGALPVTIRLLDPPLHEFLPHTD
                     DEIATVAAAMGADPKKLADRARELREFNPMLGFRGCRLAIAYPEIAEMQARAIFEAAI
                     EASRATGAPVVPEIMVPLIASKAELDLIKARIDAMAQTVSAEAKSEVEYQVGTMIELP
                     RAALRAGEIAATAEFFSFGTNDLTQTAFGISRDDAASFLGIYTSKGILPADPFVTLDR
                     EGVGELIRIAAERGRRARPGLKLGICGEHGGDPASIAFCHEAKLDYVSCSPFRVPIAR
                     LAAGQAALAKRTAPQE"
     gene            complement(3987..4148)
                     /locus_tag="VNY79_11405"
     CDS             complement(3987..4148)
                     /locus_tag="VNY79_11405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3096 domain-containing protein"
                     /protein_id="HWX73100.1"
                     /translation="MLVTATDLSPAVALVAGILILIMPRLLNFIVAIYLIFIGLVGLN
                     SVHHWVNLH"
     gene            complement(4350..>6563)
                     /gene="glyS"
                     /locus_tag="VNY79_11410"
     CDS             complement(4350..>6563)
                     /gene="glyS"
                     /locus_tag="VNY79_11410"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015668567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009345 - glycine-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004820 - glycine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006426 - glycyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HWX73101.1"
                     /translation="ELFSEEIPARMQAQAAADLRKLVTGRLVDAGLVYDGAKAFVTPR
                     RLALSVHGIPARQADSREEKKGPRVGAPENAIAGFLKAAGLKSIADAKIQSDKKGDFY
                     VAVVERPGRAALDVLGEILPGVIKSFPWPKSMRWGVQSKEPGALDWVRPLHSIVATFG
                     PETEEPEIVPFAVDGIAAGNATRGHRFLAPAPFTVRRLGDYMDKLDKAKVVLDAERRR
                     DIIAAEAKQLAFAQGLQLVADDGLLAEVAGIVEWPVVLMGSFDASFLQIPEEVIRATI
                     RNNQKCFVLRDAAHAKLVNKFILVSNMEAADGGKAIVAGNERVIRARLSDAKFFYETD
                     LKTRLEDRLPKFEDIVFHEKLGTQAERIERIERLAAELAPLVGADVEKAKRAARLCKA
                     DLLTEVVGEFPELQGVMGKYYAEAQGEDEAVAHASEDHYRPKGPDDLVPSDPVSVAVA
                     LADKIDTLVGFWAINEKPTGSKDPYALRRAALGALRLILSNRLRVRIFKWLFAHMVVV
                     KTQMAGADIDQPYSEHMPPDNLIIVELDAGKRIVQDIRQHGTPEALSKQSIGPKLADL
                     MIFFADRLKVQLREQGARHDLVDAVFALAGQDDLLLIVRRVEALGKFLDTEDGKNLLA
                     GYKRATNIIRIEEKKDNRPYTGAPDPGLYAQAEEKALAQAIELAKAEAERAVAAEDFA
                     AAMRAMAKLRPHVDAFFDKVTVNVDDKTLRENRLKLLNEIRAATRAVADFSRIEG"
BASE COUNT         1081 a         2154 c         2138 g         1190 t
ORIGIN      
        1 cgcaagcaca ccgggcttct gagccttgat gtcgagcaat actacaacga gatcgtggaa
       61 ggggtcgcgg ccggcagaac gttgaagtgg accctcccag cgggcagtgg ccgcacgttc
      121 tattccacca accagccgac acctgatggc ggctgggttt cgacccatga ggatgtgacc
      181 gatcgcgtgc gtctgcagaa ggaacacgat cacgcctccg accagcagcg ccggcgcggc
      241 gccatcgata cggcgattgc ggcgttccgc accaagatgg agacgctgct caagacattc
      301 ggcgacagcg ccgcggcgat gaagtcgacc gcggtcacgc tttccgccgc ctccaatcac
      361 acctcgcaat gcgcggaaag tgcggtcgcg gcctcgcacg aggcctcgac cggagtgcgg
      421 acggcggcgg gcgccgccga cgagctgtcg agctccattg ccgagatcgc gcggcagatc
      481 acgcagacca acaccgtcgt gcgcatggcg gtcgacgagg cacaggcgac caacggcgag
      541 atgaacacgc tcgccatgac gacgcagaag atcggcgaca tcgtcaagct catccagacc
      601 atcgccgagc agaccaacct tttggcgctc aacgccacga tcgaagcggc gcgcgccggc
      661 gaggcgggac gcggctttgc ggtggtggcg tcggaagtca aatcgctggc ggtgcagacc
      721 ggcaaggcca ccgaagcgat cgtcggacag atactgacgg tgcagagctc gaccgcgagc
      781 gccgtagaat cgatccgccg catcacccag cgcatgcagg agatcgcgca ctacgccacc
      841 ggcgtcgccg cctcgatcga ggagcagagc gccgccacga gccacatctc gtccaatgtc
      901 gcgagcgcgg cccaggcgac gcagagcatg ggcacggtgc tcgacgacgt cgccggcgcc
      961 gccacgcaga cctccatgtc agcggaagtc gtgctcgacg cctcgcgctc ggtcgaagca
     1021 gccatcgccg atctccgcgg ccacgtcgaa gccttcctgg ccggcgtcgc ggcgtagcct
     1081 tcgccctcac ctgctcgctc gctgcgggcg aacaagatca ctcctgcggt gcggtcctct
     1141 ttgcgagcgc ggcctgtccc gcggcgaggc gtgcgatcgg cacgcggaac ggcgagcacg
     1201 agacgtagtc gagcttggcc tcatggcaga acgcgatcga agcaggatcg ccgccatgct
     1261 cgccgcagat gccgagcttc aggcccggac gcgcgcggcg gccgcgctcg gcggcaatgc
     1321 ggatgagttc gccgacgccc tcgcggtcga gcgtcacgaa cggatcggcc ggcaagatgc
     1381 ccttcgacgt gtagatgccc aaaaagctcg ccgcatcgtc gcggctgatg ccgaaggcgg
     1441 tctgcgtcag gtcgttggtc ccgaaggaga agaactcggc ggtagcggcg atctcgccgg
     1501 ccctgagcgc agcgcgcggg agctcgatca tggtgccgac ctgatattcg acctcgctct
     1561 tggcctcggc ggagaccgtt tgcgccatgg cgtcaatgcg tgccttgatg agatcgagtt
     1621 ccgccttgct ggcgatgagc ggcaccatga tttccggcac gaccggcgcg ccggtggcgc
     1681 ggctggcctc gatcgcggcc tcgaagatgg cgcgggcctg catctccgcg atttccggat
     1741 aggcgatcgc cagccggcag ccgcggaagc cgagcatcgg attaaactcg cgcagctcgc
     1801 gcgcgcggtc cgcgagtttt ttcggatcgg cgcccatcgc cgcggcgacc gttgcgatct
     1861 cgtcgtcggt gtgcggcagg aactcgtgca gcggcggatc gaggagccgg atggtcaccg
     1921 gcagggcgcc catgatcttg aacagctcga cgaaatcgtt gcgctgcatc ggcaggagct
     1981 tggcgagcgc ggcgcggcgc gtcttctcgt cttcggccag gatcatctcg cgcatcgcct
     2041 ggatgcggtc ctcgtcgaag aacatgtgct cggtgcggca gagcccgatg ccctcggcgc
     2101 cgaatttgat cgcggtgcgc gcgtcggccg gcgtgtcggc gttggcgcgc actttcagct
     2161 tgcgcgcgcc gtcggcccat tgcatcagcg tcgcgaattc accggtgagc tccggctcgc
     2221 tcatcggcac cttgcccacg agcacctgtc cggtcgagcc gtcgatcgtc aggatctccc
     2281 ccttcttcat cgtcgcaccg cccgcggaca tggtctgcgt gcgatagtcg acgcgcagca
     2341 tgccggcgcc ggcgacgcag ggcttgccca tgccgcgcgc gaccacggcg gcgtgcgagg
     2401 tcatgccgcc ccgcgtggtc aggatgccct cggcggcgtg catgccgtgg atgtcctccg
     2461 gcgaggtctc cacccgcacc agaatgacct tgcgcccctg gttgctgagc gcttccgcgt
     2521 cctcggacga gaacacgatc tcgccggagg cggcgcccgg cgaggccggc aggccggtcg
     2581 cgatcacgtt gcgctcggcg gccggatcga tggtcggatg caggagctgg tcgagcgcgg
     2641 cgggatcgac gcgcgtcacc gcttcctcct tgctgatcag cttctcctgg gcgagctcga
     2701 cggcgatgcg gagcgccgcg cccgcggtgc gcttgccgct gcgcgtctgc agcatccaca
     2761 gcttgccctg ctccaccgtg aattcgaggt cctgcatgtc gcggtagtgc cgctcaagcg
     2821 cggcatagat gcgcttgagc tcggcgaagg cttgcggaag cgccgcctcc atcgacggct
     2881 tgtccgaacc cgcttcctgc cgcgccgctt cggtgatctc ctgcggggtg cggataccgg
     2941 cgacgacgtc ctcgccctgg gcgttgatga ggaattcgcc gtaaagcttc ttctcgccgg
     3001 tcgagggatt gcgcgtgaag gcgacaccgg tcgccgaggt ctcgcccata ttgccgaaca
     3061 ccatcgcttg cacgttgacc gcggtgcccc agctttccgg aatgccgtgc aggcggcgat
     3121 aggtgatcgc gcgcgggttc atccacgagc cgaatacggc gccgatggcg ccccatagct
     3181 gcgcctgcgg gtcctgcgga aacgccttgc cggtctcctc ctcgatgcgc tgcttgaaca
     3241 cgccgaccag ctcctcccag tcggccgctt cgaggtcggt gtcgagcgtg tagccgttgc
     3301 gctccttgtg ctcgtcgagg acttcctcga agtgatggtg gccgatgcca agcaccacgt
     3361 cggcatacat gctgacgaag cgccggtagc tgtcgtaagc gaagcgccgg tcgcccgaat
     3421 tcttcgccag cgccgcgacg gtggcatcgt tgaggccgag attgagcacg gtatccatca
     3481 tgcccggcat tgacgcgcgc gcccccgagc gcaccgatat gagcagcgga ttttcctcgt
     3541 cgccgaattt cttcccggtg atgcggccga cctcggcgag ggcagcgtcc accttcgcct
     3601 tgagctcctt cggataggtt ttgccgttct gataaaaatg cgtgcacacc tcggtggtga
     3661 tggtaaagcc gggcggcacc gggacgccga gatgcgccat ctcggcaagg ccggcgccct
     3721 tgccgccgag gaggttgcgc atgccggcgc ggccctcggc cttgccgccg ccgaaggcgt
     3781 acacccattt gcccatcggc gcggcagacg gcgccgtggt tcgtcctttt tggcgatcct
     3841 tcgccttcac ggcgcgccgc ggcgatttct tctccggtcg atgcgatgct ttggagcgag
     3901 acttgaccat gggatgatgc gttcgatttc cccggctcgt cgttacccaa cggccgccat
     3961 tcgacgtaac gccgcagcgg cgtcaatcag tgtaaattga cccagtgatg aacgctgttg
     4021 aggcctacga ggccgatgaa aatgagatag atggcgacga tgaagttcag cagccggggc
     4081 atgatcaaga tcaggatgcc ggcgacgagg gcgacggccg gcgacaggtc ggtggcggtg
     4141 acgagcattg gattttcctg tggtttcgat gaatttgcgc gaaaagggca acgggcgcgg
     4201 ctgcacaacc tacgcataac gcgcagaccg ccgtccggtt ctaggcgaca agggcggcgg
     4261 attccagccc gtgcgcaacg gcggtccctg gaatcgcgcg gcggcaaatc ccttccccgc
     4321 ttgcgcggcg cgtgctgggg aggggaatgt tatccctcga ttcgggagaa atcggcgacc
     4381 gcgcgcgtcg ccgcccggat ttcgttgagg agcttcagcc ggttctcgcg cagcgtcttg
     4441 tcatcgacgt tgacggtcac cttgtcaaag aacgcatcga cgtgcggccg cagcttcgcc
     4501 atggcgcgca tggcggcagc gaaatcctcg gccgcgaccg cacgctctgc ttccgccttc
     4561 gctagttcaa tcgcctgcgc cagcgccttt tcttcggctt gcgcgtaaag cccgggatca
     4621 ggcgccccgg tatatgggcg attgtccttt ttctcctcga tgcggatgat gttggtcgca
     4681 cgcttgtagc cggcgagcag gttcttgccg tcctcggtgt cgaggaattt tcccaatgcc
     4741 tcgacgcggc ggacgatgag cagaagatcg tcctggcctg ccagtgcgaa caccgcgtcg
     4801 acgagatcgt gccgcgcgcc ttgctcgcgc agttggactt tcaagcgatc ggcgaagaaa
     4861 atcataagat ccgcgagctt ggggccgatg ctctgcttcg acaacgcttc cggagttccg
     4921 tgttgtcgaa tgtcttgaac aattctctta ccagcatcga gttcgacaat tatcaagttg
     4981 tccgggggca tatgttcgct gtacggctga tcaatatcag cgccggccat ttgtgtcttg
     5041 acaactacca tgtgagcaaa aagccatttg aaaattcgaa ctcgaagtcg attgcttaga
     5101 atgagtcgca acgcccctag tgccgccctt cgtaaggcgt atgggtcttt gctcccggtc
     5161 ggcttctcgt tgatggccca gaacccgacg agcgtgtcga tcttgtcggc gagcgcaacg
     5221 gcgacggaaa ccggatcgct cggcaccaga tcgtccggcc ccttcggcct gtagtgatct
     5281 tcgctggcgt gggcgacggc ttcgtcctcg ccctgggcct cggcgtagta tttccccata
     5341 acgccctgca actcagggaa ttcgccgacc acttcggtga gcagatcggc cttgcatagc
     5401 cgtgccgcgc gcttcgcctt ctccacatcg gcgccgacca atggcgccaa ttccgcggcc
     5461 aatcgttcaa tgcgttcaat gcgctcggcc tgggtgccca acttctcgtg aaagacgatg
     5521 tcctcgaact tcggcagccg gtcctcgagc cgcgtcttca gatcggtctc gtaaaaaaac
     5581 ttcgcgtccg agaggcgcgc tcggatgacg cgttcgttgc cggcgacaat cgccttgccg
     5641 ccgtccgccg cctccatgtt ggaaacgagg atgaacttgt tgacgagttt tgcatgcgca
     5701 gcatcgcgca ggacgaagca tttctggttg ttgcggatgg tggcgcggat cacctcctcg
     5761 gggatttgca ggaagctcgc gtcgaacgat cccatcagca ccacgggcca ctcgacgatg
     5821 ccagcgacct cggccaggag gccgtcgtcg gcgacgagtt ggagcccctg cgcgaaggca
     5881 agctgctttg cttccgccgc gatgatgtcg cgccgccgct cggcgtcgag cacgaccttg
     5941 gccttgtcga gcttgtccat gtagtcgccg agccggcgca ccgtgaatgg cgccggcgca
     6001 agaaagcgat ggccgcgcgt cgcattgccg gcggcaatgc cgtcgacggc aaacggcacg
     6061 atctcgggct cctcggtctc cggcccgaac gtcgccacga tcgaatgcag cggccgcacc
     6121 cagtcgagcg cgcccggctc cttcgattgc acaccccagc gcatggattt cggccacggg
     6181 aagcttttga tgacgccggg caggatttcg ccgagcacgt cgagcgcggc gcggcccggc
     6241 cgttcgacga cggcgacgta gaaatcgcct ttcttgtccg actggatttt cgcgtcggca
     6301 atcgacttca gtccggctgc cttgagaaat ccggcgatcg cgttctccgg tgcgccgact
     6361 cgcggcccct tcttctcttc gcgcgaatcg gcctggcgcg cgggaatgcc gtggacggag
     6421 agcgcgagac ggcgcggcgt cacgaacgcc ttggcgccgt cgtagacgag accggcgtcg
     6481 accagccggc cggtcacgag cttgcgcaga tccgccgccg cctgcgcctg catgcgggcg
     6541 ggaatttcct cggagaaaag ctc
//
LOCUS       DATMQB010000400         6544 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_817928, whole genome shotgun sequence.
ACCESSION   DATMQB010000400 DATMQB010000000
VERSION     DATMQB010000400.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6544)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6544)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6544
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_817928"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(564..1244)
                     /locus_tag="VNY79_11415"
     CDS             complement(564..1244)
                     /locus_tag="VNY79_11415"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HWX73102.1"
                     /translation="MGAELDKDAVAKAYARWAPIYDFVFGAVFERGRKASVAAAERIG
                     GRILEVGVGTGISLPEYRWTTRVVGVDLSMPMLRRAKARVREHGLSNVDGLAVMDAQN
                     LGFEEASFDVVVAQYVITAVPDPEATLDEFARVLRPGGEIVLVNHLGAEAGLRSAFEQ
                     LLAPLARRLGWRPEFPWERLARWAARHGGVRVVERRAMPPLGHFSLIRFARTSRFAGD
                     LAPAGAAR"
     gene            complement(1278..2462)
                     /gene="mnmA"
                     /locus_tag="VNY79_11420"
     CDS             complement(1278..2462)
                     /gene="mnmA"
                     /locus_tag="VNY79_11420"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018235503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA];
                     GO_function: GO:0016783 - sulfurtransferase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HWX73103.1"
                     /translation="MLNGLDIEGRPSDTRVVVAMSGGVDSSVTAALLADAGYDVVGIT
                     LQLYDHGAARHRKGACCAGRDIHDARAVAERLGIPHYVLDYENRFKEAVIDRFAESYV
                     AGETPVPCVECNQSIKFRDLLATARELGAKVLATGHYVASRALPGGGRALYCAREAER
                     DQSYFLFATTGAQLELLRFPLGDRTKAETRELARRFGLAVADKHDSQDICFVPSGHYA
                     DVIERLRPGAAAPGEIVDLDGRALGGHDGIIHFTVGQRRGLGIATGAPLYVVRLDAPS
                     RRVVVGPREALRTSLIQLREVNWLGDGTLDEAMERRPEVYVKVRSTRPPQPAWLRRRA
                     DGDVEVELLAGEDGVSRGQACAFYDAAAGQARVLGGGIIAGTTAAVAAKATLGADLAA
                     AQ"
     gene            3122..3376
                     /locus_tag="VNY79_11425"
     CDS             3122..3376
                     /locus_tag="VNY79_11425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73104.1"
                     /translation="MAKPDAAGPSPTALSSSGKASADDAQGAPGTDGGAASAAAGQAQ
                     GATDPTQPVVAAIVLDAAGVGQAAVKLHLERSPQQRRDLA"
     gene            3681..3956
                     /locus_tag="VNY79_11430"
     CDS             3681..3956
                     /locus_tag="VNY79_11430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011156827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1153 domain-containing protein"
                     /protein_id="HWX73105.1"
                     /translation="MTEPHRPRVKYVIGPDGSPLTIADLPAPGTKRWVIRRKAEVVAA
                     VRGGLLSLEEACSRYTLTVEEFLSWQYSIDQHGLAGLRTTRIQQYRQ"
     gene            4217..4534
                     /locus_tag="VNY79_11435"
     CDS             4217..4534
                     /locus_tag="VNY79_11435"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73106.1"
                     /translation="MGPPAWTQSTSEPVVAPAPRTINLTQEQRFIIKEVVFKDLHVPK
                     ARADAPETIGDAVPKNIDLHPMPPVLADKVPQGRSHSFFVKDDNVIVLVSPNDHRVAD
                     VIR"
     gene            4754..4987
                     /locus_tag="VNY79_11440"
     CDS             4754..4987
                     /locus_tag="VNY79_11440"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73107.1"
                     /translation="MQGVLEFLKTLGASRIAAMGAFTVALVGFFAFLILRVTAPRMTS
                     LFTDLAFEDSAAVVLVEEKLGVTMTEIIKVERA"
     gene            5199..6407
                     /locus_tag="VNY79_11445"
     CDS             5199..6407
                     /locus_tag="VNY79_11445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013912842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA];
                     GO_process: GO:0015074 - DNA integration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-type recombinase/integrase"
                     /protein_id="HWX73108.1"
                     /translation="MPRMRLTKSAIDALPPAKSDVVYWDAGSPGFGVKITPKGRKVFI
                     VLYRAGGAGSKLRKYTIGPYGRVTLHQARVAAQKVFAAKLEGRDPAAEKREARRRLVA
                     DRVEDLLESFITQRLARNRSAGEIARLLRREVGKPLAGRSIHEISKRDVVEVVAAIEQ
                     RGAPVAANKTLKSLKTFLRWCVGQAVLDQSPAEGVPPPGKEVTRDRVLNDQELAQAVL
                     AARKMGGPYSGIVEFLALTGQRREEVARMKWNELDLAQRVWTIPKSRTKNAKEHVVHL
                     SEQSMAVLKRADKKEPFVFSLLGAKPFQQFSKGKRKLDQLSGVTEWRLHDLRRTCVSG
                     MARLGIAPHVADKILNHQAGTISGVAAVYQRHEFLSERREALDRWGAHIGAILRDKPG
                     EHRIDLRIVA"
BASE COUNT         1170 a         2159 c         2133 g         1082 t
ORIGIN      
        1 atcgcgtcag cgtcagcgcc ggcgagaccg gcttcacgat tgaactcgtc ggggagatcg
       61 ccaacatggt gcggctctcc gccggcgcgg aaagcctagg aaacgagccc tatcggagtt
      121 cggtaaaggt ggttgcgggg gtaggatttg aacctacgac cttcaggtta tgagcctgac
      181 gaccgagtac gcttccctgt cggatttgcg atcggcgcgc cggcgagatc gatttgcaga
      241 tttagctcag aacaaaggtc gaactgattg ctaccatttt gctacccaac tcggtagcac
      301 gggccagtgc ggaccaggat aggagcggac tctcacccaa aattctttcg ataattcagt
      361 acttgctgag atagaacagg ataggaagag acggccgcaa ccgaattatg attccgctgc
      421 tctaaccaac tgagctactc cgccaaagca ggtgacatgc gccggccgga gatttaaggg
      481 aattcagcag gctttccaag gggccgcatt ttccaggagc ggtacccggc cgcgagccct
      541 catcgcgggt gcgcaggctc atctcacctt gccgcgcccg ctggggcgag atcgcccgcg
      601 aagcggctgg tgcgggcgaa gcggatgagc gagaaatggc cgagcggcgg catggcgcgc
      661 cgttcgacga cgcgcacgcc gccatgccgc gccgcccagc gcgcgagccg ctcccacggg
      721 aattccggcc gccagccgag ccggcgggcc agcggcgcga gcagctgctc gaacgccgag
      781 cgcagccccg cttcggcgcc gagatgattg accagcacga tctcgccgcc gggccgcagg
      841 acgcgtgcga attcgtccag cgtcgcctcc gggtccggca cggcggtgat gacgtattgc
      901 gcgacgacga catcgaagga ggcttcctcg aagccgaggt tctgcgcgtc catcaccgcg
      961 agcccgtcga cattgctgag cccatgctcg cgcacccgcg ccttcgctct gcgcagcatc
     1021 ggcatcgaaa gatcgacgcc gaccacgcgg gtcgtccagc ggtattcggg cagcgaaatg
     1081 ccggtgccga cgccgacttc aaggatgcgt ccgccgatcc gctcggccgc ggcgaccgag
     1141 gccttgcggc cgcgctcgaa caccgcgcca aacacgaaat cgtagatcgg cgcccagcgc
     1201 gcataggcct tggcgacggc gtccttgtcg agttcagccc ccatcgctcc cgccgccgcg
     1261 ccgtgatcac tatgccgtca ctgtgccgcc gcgagatcgg cgccgagcgt ggccttcgcc
     1321 gcgaccgcgg cggtcgtgcc ggcgatgatg ccgccgccaa gcacccgggc ttggcccgcg
     1381 gccgcatcgt agaaggcgca agcctgtccg cgcgacacgc cgtcctcgcc ggcaagcaat
     1441 tcgacctcga catcgccgtc ggcgcggcgg cgcagccacg ccggctgtgg cggccgggtc
     1501 gagcgcactt tcacgtaaac ctcggggcgg cgctccattg cctcatcgag cgtgccgtcg
     1561 ccaagccagt tgacctcgcg gagctggatc agactcgtgc gcagcgcctc gcgcgggccg
     1621 accacgacgc ggcgcgaggg cgcgtcgagc cgcacgacgt aaagcggcgc cccggtcgca
     1681 atgccgagcc cgcgccgctg gccgacggtg aaatgaatga tgccgtcgtg accgccgagc
     1741 gcgcggccat cgagatctac gatctcgccc ggcgccgccg cgcccggccg taggcgctcg
     1801 atcacgtcgg catagtggcc gctgggcacg aagcagatgt cctggctgtc gtgcttgtcg
     1861 gcgacggcaa gaccgaagcg ccgcgccagc tcgcgcgtct ccgccttggt gcggtcgccg
     1921 agcgggaagc gcagcagctc gagctgcgca cccgtcgtgg cgaacaggaa gtagctttgg
     1981 tcgcgctcgg cctcgcgcgc gcaataaagc gcgcggccgc cgcccggcag cgcgcgcgag
     2041 gcgacgtagt ggccggtcgc cagcaccttc gcgccgagct cgcgcgcggt ggcgaggagg
     2101 tcgcggaact tgatcgactg gttgcactcg acgcagggca ccggcgtctc gccggcgacg
     2161 tagctttcgg cgaaacggtc gatcaccgct tccttgaagc ggttttcgta gtcgagcacg
     2221 taatgcggga tgccgaggcg ctcggccacc gcgcgagcgt cgtggatgtc gcggccggcg
     2281 cagcaggcgc ccttgcgatg cctcgccgcg ccatggtcgt aaagctgcag cgtgatgccg
     2341 accacgtcgt agccggcatc ggcgagcagc gccgccgtga cggaggaatc gaccccgccc
     2401 gacatggcga cgacaacgcg cgtgtcggac ggccggccct cgatatcgag cccgttgagc
     2461 atggccatac tataagcgcc gcgcaccggc ggcgccacgg ttgcccgttc actgccccct
     2521 gtaccggtga gttcctccgg ccggcaaaat tgccgcccgc gcgcaagggc tgccgcgctt
     2581 cgcccgccgc ggccgccgcg caaagccttg aacggacgtg gtttgtcgcg cgtgcgccgt
     2641 ttggcccgcc ggttgcacgt ttgcgcgcgt ccgatcgcga tagcgcagag gttttttgcc
     2701 gtgccgcgta tcctgtcaga agtcagcgcc gttctcgcca gcgttctcgc cgcggcaaca
     2761 aacgctcacg attgttgcgg aaggggacgc gcagccgttc tcggcgttgc ttgatgccgc
     2821 cgcgcccgcg ccaccgccga cgcccgcacc gcccccgcca acgccaaaga cggctcaccg
     2881 cgcgcttctt cgccaagccg gtagaccggc cgtgaggcgg gccgcagcca gggctcagcc
     2941 gacgccgtaa ggcatgcgac aaacagccgg agcgccgcga agagtacaag ttcggccgcc
     3001 aaggcatcga ccggcgcgca ctcccctgcg aaggacggcg caagcgccgc caaggccgag
     3061 caacggccag caaggttcgc agagcgatgc cgccggcagc gcggcgagcg attcccacgc
     3121 cgtggcgaag ccggacgccg ccggtccatc cccaaccgcg ctgtcgtcgt cgggcaaggc
     3181 atctgcggac gacgcccagg gtgctccggg caccgacggc ggcgcggcct ccgcggccgc
     3241 cggccaagct cagggcgcga ccgatccaac gcagccagtg gtggcggcga ttgtccttga
     3301 cgccgccggc gtcgggcagg ccgcggtaaa gcttcacctg gaacggtcgc cgcaacaacg
     3361 gcgtgacctg gcctgacggc agctacacca tctcgatcag cgcgaccggc gccaacggcc
     3421 agccgggtcg gcgtctcgac gcatgtgcaa ggcgttgcaa ggtgttatca gcgccgtcga
     3481 tgtcagccag aacccgcctc ggctcaccgt cggcgggcaa aaggtgccga tcagccagat
     3541 ccaatcgatc agccgctgac tatccccgta ccattcccag gcgccggcaa aacccctgtg
     3601 atccgcggtt ccgcttaggc aaattttaag cggcggtgcg taaggtccgg gtttgtggtg
     3661 ttcgagttcg tgagagtgca atgacagagc cccatcgccc gagggtcaaa tacgtcatcg
     3721 ggccggacgg ttctccgctg acgatcgctg atttgccggc gccgggaacg aagcgttggg
     3781 tcatccgccg caaggcggag gtggtcgccg cggtccgcgg cggacttctt tcgcttgaag
     3841 aggcatgcag ccgttacaca ctgacggtcg aggaatttct ttcctggcaa tactcgatcg
     3901 accagcacgg ccttgccggc ctgcgcacga cccgcattca gcagtaccgt cagtaacgcg
     3961 cgattgatcg atccggctga ggccgcaaga cggccagcgc ggaaggcggc tacttcccgc
     4021 ggccgcgatc gctcgttgcg tgccgcttcc tcgatcagcg cagggatcgc atagccgcat
     4081 cgaccggcgc gcggcggtgg aaccgcgcgc cccgccgcgc gtttgacgta aacgccgaac
     4141 tctgcagacg gggaccgcca tgcctggacc tctgaaagct ctccttttcg tgctcgcagg
     4201 cctatctggt ttagcattgg gcccgcccgc gtggacgcaa agcaccagcg agccggtcgt
     4261 cgcgccggcg ccgcgcacca tcaatctcac ccaggagcag cgtttcatca tcaaggaggt
     4321 cgtgttcaag gatctccacg ttccgaaagc gcgggccgac gcgccggaga cgatcggtga
     4381 cgccgtgccc aagaatatcg acctgcatcc catgccgccg gtgctcgcgg acaaggtgcc
     4441 gcaaggccgt tcgcattcct tcttcgtcaa ggacgacaac gtgatcgtgc tcgtcagtcc
     4501 gaacgaccac cgcgtcgccg acgtgatccg ctagcgctct ccgctcattc ccgcgcaggc
     4561 gggaatccag acgacgaccc cagaggacgc tgagctgagt gaactcctgg tccccggttt
     4621 tcgccggggc caggagttgt cgcgtcgcgc caaggtgcgc ccgcgaataa gcatcttaac
     4681 cgggcgctaa ccataagccg ggcaaatcct gccgagcggg acgcgcggcg tcgtccgtcg
     4741 ggggagcagc tcggtgcagg gtgtgcttga gtttctaaag acgctcggcg cctcgcgcat
     4801 cgcggcgatg ggtgccttca ctgtcgctct ggtcgggttt ttcgcttttc tcattctgcg
     4861 cgtgaccgcg ccgcggatga cctcgctgtt caccgacctc gccttcgagg actccgccgc
     4921 cgtcgtcctg gtcgaggaga agctcggcgt gacgatgacg gaaatcatca aggtggagcg
     4981 ggcgtgatct acgcccctgc acacggcaac tcttcccttc ctccccttgc gttctcgggg
     5041 ccgtgtttcc ctgagatgga tgttgattgc tggcggttca taacgcgctg atttgtcttg
     5101 catcaacgca gacggcgggt cacgttcaat cctgtcattt catttgcggt gctacctatg
     5161 tgaagtggag gtagcacctt ctgagaggac ctaattccat gcctcgcatg agattaacca
     5221 agagcgcgat cgacgctctt cctccggcta aatcagatgt cgtgtactgg gatgccggct
     5281 ctcccggctt cggcgtcaaa atcacgccga agggccgcaa agtgttcatc gtgctctacc
     5341 gcgcgggcgg tgccggctcg aagctgcgca aatacaccat cgggccatat ggacgcgtaa
     5401 ccctccacca ggcccgcgta gccgcgcaga aggtgttcgc ggccaagctc gaggggcgcg
     5461 atcccgcggc agaaaagcgg gaggcgaggc gacgattggt ggcagatcgc gtggaggatc
     5521 tgctggagag cttcattacc cagcggctgg cccggaaccg gtctgccggc gagattgcgc
     5581 ggcttctgcg tcgagaggtg ggaaagccct tggccggcag gagcattcat gagatcagca
     5641 aacgagatgt ggttgaggtc gttgcggcga tcgagcagcg gggcgctcct gtcgccgcca
     5701 acaagacctt gaagtcgctc aagacgtttc tgcgctggtg cgtgggccag gccgtgctcg
     5761 atcaatcccc ggccgaaggc gtccccccgc cgggaaagga agtcaccaga gacagggttc
     5821 taaacgacca ggaactcgcg caggccgtcc tggcggccag aaagatgggc ggtccctata
     5881 gtggcatcgt ggaatttttg gccctcacgg ggcaacgccg cgaagaggtc gcacggatga
     5941 aatggaacga actggatctc gcgcagcgag tctggaccat tcccaaatca cggaccaaga
     6001 atgccaagga gcatgtcgtg cacctgtctg aacaatcaat ggctgtgctc aagcgagcag
     6061 acaagaagga gccgttcgtt ttctcgctgc tcggagccaa accatttcaa cagttcagca
     6121 agggcaaacg caagttggat cagctctcgg gtgtgaccga atggcgcctt cacgacttgc
     6181 gccggacctg tgtgtccggg atggcccggc tcggaattgc gccgcacgtg gcggacaaaa
     6241 tcctcaacca tcaggctggc acaatctcag gagtcgcggc cgtatatcaa cgacacgagt
     6301 tcctttcgga acgtcgagag gcgctcgacc ggtggggagc ccatatcggg gcaattctca
     6361 gggacaaacc cggcgagcac cgtatcgacc taagaatcgt cgcatgagca ctgctctgca
     6421 aagtaggatg tatttaacgg cgtgaactca tagacgcgtc aacgtacctt aattcctggc
     6481 gtcgtcgagg gcggaccgac ggttggtgca agctgcttga gcctgatggc agcgtacatg
     6541 cagg
//
LOCUS       DATMQB010000401         2860 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1733877, whole genome shotgun sequence.
ACCESSION   DATMQB010000401 DATMQB010000000
VERSION     DATMQB010000401.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2860)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2860)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2860
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1733877"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..419)
                     /gene="msrA"
                     /locus_tag="VNY79_11450"
     CDS             complement(<1..419)
                     /gene="msrA"
                     /locus_tag="VNY79_11450"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008113 - peptide-methionine (S)-S-oxide
                     reductase activity [Evidence IEA];
                     GO_function: GO:0033744 -
                     L-methionine:thioredoxin-disulfide S-oxidoreductase
                     activity [Evidence IEA];
                     GO_process: GO:0006979 - response to oxidative stress
                     [Evidence IEA];
                     GO_process: GO:0030091 - protein repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HWX73109.1"
                     /translation="MSTLRKKLEMPAADDALPGRPTPMATAREHFLTGRPLKGPYPEG
                     LAMAMFGLGCFWGAERKFWELGDGIYVTAVGYAGGLTPNPTYEEVCSGRTGHNEAVLV
                     VYDPKKISYERLLKAFWENHDPTQGMRQGNDVGTQYRS"
     gene            832..1344
                     /locus_tag="VNY79_11455"
     CDS             832..1344
                     /locus_tag="VNY79_11455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018644712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-binding protein"
                     /protein_id="HWX73110.1"
                     /translation="MPRMLALAGALVALALAAGPATAQQPAGTAQAPPPPYGPPITLD
                     QAKRVMAAAELEAAKNSWQVAIAILDSGGNMVMFHKFDNTQLASIGASEGKANTALRF
                     KRPSKALDDAIAAGGAGLRLLAVKDITPLEGGLPVMLDGKIIGAIGVSGALSSQDAQV
                     ARAGVAAVVK"
     gene            complement(1498..2001)
                     /locus_tag="VNY79_11460"
     CDS             complement(1498..2001)
                     /locus_tag="VNY79_11460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF892 family protein"
                     /protein_id="HWX73111.1"
                     /translation="MAAKEKALDDLFEETLKDIFYAENKILKALPKMAKAAHSEELKA
                     AFEKHLKETEGQVSRLEKVFDMIEVAPRGKKCEAIEGMIEEGAEIMKEFKGAPALDAG
                     LVSAAQAVEHYEIARYGTLKRWAEQLGLDEAAGLLEETLEEEKNTDEALTELAEATIN
                     EHAQAAE"
     gene            complement(2208..>2860)
                     /locus_tag="VNY79_11465"
     CDS             complement(2208..>2860)
                     /locus_tag="VNY79_11465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013504209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="UvrB/UvrC motif-containing protein"
                     /protein_id="HWX73112.1"
                     /translation="ESVRKGIADILDSVYERDHVLISTGAGSGGEFAEAATIGHNFEA
                     VIGDLETRMRAAAADLDFEEAARLRDELKRLRSTELAVIDDPTSKYPASPSPRARGEG
                     RGEGASRRAQNRGGARSPGSLRDPTSPRAAGRGEAGRGEGSKVHKPALDEMGIALYHE
                     VAPHRADAARRGSPRKPNLDEMGPAVESVPGKRDPSGPRSTLGRPGMRGGWKPRRR"
BASE COUNT          406 a         1000 c          928 g          526 t
ORIGIN      
        1 gagcggtatt gcgtgccgac gtcattgccc tgccgcatgc cctgcgtcgg gtcgtggttc
       61 tcccagaacg ccttgagcag ccgctcgtag gagatcttct tcggatcgta gaccacgagc
      121 actgcctcgt tgtggccggt acggccgctg cacacctcct cgtaggtagg attgggcgtg
      181 aggccgccgg catagccgac cgcggtcacg tagatgccgt cgccgagctc ccagaatttc
      241 cgttcggcgc cccagaagca gccgagcccg aacatcgcca tggcgagccc ttcgggatag
      301 ggtcccttga gcgggcgccc ggtaagaaaa tgctcccggg cagtggccat gggcgtcgga
      361 cgccccggca aggcatcgtc ggccgccggc atttcaagct tcttccgcaa cgtggacatg
      421 tcggcacctc ctgcgtaccg gcgaaatata agccttggcg ggttgcggcg cagccgcaat
      481 tgcgatcacg tttttcgctt ggcagccgag ccaccgcgat tcgcggcctc gccggaaagt
      541 atgccggctg cggccctcgc tccggcgcaa tcctgcctcc gacgatcgac aaggagcaag
      601 cggtgtttct cgcggccctg acgaaagttt gttctcgccg tcaagccgtt cgcggttctc
      661 tctccgctag aggttgatgg gggcacactg ctttctcgca cccacaacag cacgtgcgct
      721 tcgagcgtga gcggccaacg tgcgcggtag cgaccgcttc caccagccgg atttgccgct
      781 tattgtgcgg cggagccgcg gagagcggcg cgcccagtgg aggtgctgca gatgccccgg
      841 atgctcgccc tcgcaggcgc gttggtcgcg ttggcgctgg ccgccgggcc cgctacagcc
      901 cagcaacccg ctggcacggc gcaggcgcca ccgccgccct acggaccgcc gatcacgctc
      961 gatcaggcca agcgggtgat ggcggcggcc gagctcgagg cggcgaagaa ttcctggcag
     1021 gtggcgatcg ctatcctcga cagcggcggc aacatggtga tgttccacaa gttcgacaac
     1081 acccagctcg cctcgatcgg cgcctctgag ggcaaggcca acaccgctct gcgcttcaag
     1141 cggccgagca aggcgctcga cgacgccatc gccgccggcg gcgccgggct gcggctgctc
     1201 gcggtgaagg acatcacccc gctcgaaggc ggcctcccgg tcatgctcga cggcaagatc
     1261 atcggcgcga tcggcgtctc cggcgccctt tcctcgcagg acgcgcaggt ggcgcgcgcc
     1321 ggcgtcgcgg cggtggtgaa gtagatcgac gccttcattt cttcatccac acccatctct
     1381 tcatcgacac ccattccggc gacctacagc cgcatacgca accgcgcccg gcgcttcggc
     1441 ggcgccgggc gcgtcgcgtt cgggatgtgc gcagggcaag atcgggcggc ggtcagtcta
     1501 ttccgctgcc tgcgcgtgct cgttgatcgt cgcttcggcg agttcggtca gcgcctcgtc
     1561 ggtgttcttt tcctcttcca gcgtctcctc cagcagcccc gcggcctcgt cgaggccgag
     1621 ttgctcggcc caacgcttca gggttccgta gcgcgcgatc tcgtagtgct cgacggcctg
     1681 ggcggccgag accagcccgg catcgagcgc gggggcgccc ttgaactcct tcatgatctc
     1741 ggcgccctcc tcgatcatgc cttcgatcgc ctcgcatttc ttgcctctcg gggcgacctc
     1801 gatcatgtcg aacacctttt ccagccgcga cacctggccc tcggtttcct tcaagtgctt
     1861 ctcgaaggcc gccttgagtt cctcggagtg tgccgccttc gccatcttcg gcagcgcttt
     1921 caggatcttg ttctcggcgt agaagatgtc cttgagagtc tcctcgaaca ggtcatcgag
     1981 cgccttctct tttgccgcca tttccgggtc tctcctctcg catgtgttcg gtggtcgctg
     2041 ggccaacgcg acctgcacgg cttggttcct aacaacgcgc ctggcggatt tttgttgaag
     2101 ttcgcggcaa gcacctctcc ccgcggcgcg gggagagggg aagcgggatg cttcgccctc
     2161 tgcgcggtca gatcgacgac cgagcggagc gggccgaacc gcccgtccta acgccgccgc
     2221 ggcttccagc cgccgcgcat gccggggcgg ccgagggtcg agcgcgggcc ggaaggatcg
     2281 cgcttgccgg gcaccgactc aacggcgggg cccatctcgt cgagattcgg cttgcgcgga
     2341 ctgccgcgcc gagccgcgtc ggcccggtgc ggcgcaacct cgtggtagag cgcgatgccc
     2401 atctcgtcga gcgcgggctt gtggactttg cttccttcac ctcgccccgc ttcacctcgc
     2461 cccgccgcgc ggggagaggt cggatcgcga agcgatccgg gtgagcgtgc gccgccgcga
     2521 ttctgagctc tcctcgaagc cccctcaccc cgaccctctc cccgcgcgcg gggagagggc
     2581 gaagcaggat atttggaagt cgggtcgtcg atcaccgcga gctcggtgga acgcaggcgt
     2641 ttgagctcgt cgcgcagccg cgccgcctcc tcgaagtcga gatcggcggc ggcagcgcgc
     2701 atgcgcgtct ccaggtcgcc gatcaccgcc tcgaaattgt ggccgatggt cgcggcttcc
     2761 gcgaactcgc cgccgctgcc ggcgccggtc gagatcagca cgtggtcgcg ctcgtagacg
     2821 ctgtcgagaa tgtcggcgat gcccttgcgc acgctctccg
//
LOCUS       DATMQB010000402         2432 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3286397, whole genome shotgun sequence.
ACCESSION   DATMQB010000402 DATMQB010000000
VERSION     DATMQB010000402.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3286397"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(421..1230)
                     /locus_tag="VNY79_11470"
     CDS             complement(421..1230)
                     /locus_tag="VNY79_11470"
                     /EC_number="3.1.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008441 - 3'(2'),5'-bisphosphate
                     nucleotidase activity [Evidence IEA];
                     GO_process: GO:0006790 - sulfur compound metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3'(2'),5'-bisphosphate nucleotidase CysQ"
                     /protein_id="HWX73113.1"
                     /translation="MSNFDSAACAALLEELTAISIAAAEAIRSMPADRGVRLKADGSP
                     VTAADEAAEAVIRDGLARLGLPLPVISEESADLAGASIAAPSFILVDPLDGTREFIAG
                     RDEYAINIGLVADGAPAAGVITAPALGRIWRGVVGRGAERLQFFAGRTSPPERIRTRP
                     RPGADLLVMVSRSHLDARTEAYLKRWPGARRVASGSAIKFCRVAEGGADLYPRLGPTH
                     DWDVAAGHAIVAAAGGCVVGPTGQPLAYGSAGLKIPAFLACGDPADVPAEA"
     gene            1381..2031
                     /locus_tag="VNY79_11475"
     CDS             1381..2031
                     /locus_tag="VNY79_11475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphotransferase family protein"
                     /protein_id="HWX73114.1"
                     /translation="MSAPVSGPIAVGALDLAALLCSRVCHDLISPVGAIVNGIEVLDE
                     GKDEETKTFALDLIRKSAAQASAKLQFCRMAFGAAGSAGAQIELGDAEKTARGLLEDG
                     KITLVWNLPCELMPKNRVKLLMNMLMLAAAAIPRGGVLTADPIAGAEGGAGFAVRASG
                     LNARLPAATAELVSGSPAQAVDAHVIQPFYAGILARDCGLVLSAGSEGEAVVLTAR"
     gene            2205..>2432
                     /locus_tag="VNY79_11480"
     CDS             2205..>2432
                     /locus_tag="VNY79_11480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73115.1"
                     /translation="MDDLLREFLTETNESLDRVDAELVLDLQSAAGVGTAFTIKIPLT
                     LAIVSSLLVEAGGERFAMPQLSVLELVQAGNG"
BASE COUNT          389 a          816 c          821 g          406 t
ORIGIN      
        1 gccggcatcg atgacctcgt tcgacgagta ttggttggcg ggtggtggcc cctgcggcgg
       61 cggcgaatcg gtctgcgcca gcccgggagc ggcgccgagg ccgacaacga gcccggcaat
      121 ggcggcaaag cgcgcggcga agttcatcag gcgtccccca agttagccgg ttactcaccc
      181 acccggcata cctcccggtt ccactcccca tttcaagttt ggcgcgagtt caatgcgaat
      241 cattccattt tttgccaaca ctatgaccgc agcacggcga caacgaaagg gataccgcgt
      301 ttatggtgca gcgctcggcg ctctgatgtt tgcgtttcgc gcacgctaag ccgttgattt
      361 ggcggcagcg aacccagggt tccgtaggtg gtcgatgagc ttttcgtact tcgccggccg
      421 ttaggcttcg gcgggtacgt ccgccggatc gccgcaggca aggaacgcgg ggattttcag
      481 ccccgcactg ccgtaagcga gcggctggcc ggtcggacca acgacacatc ctccagccgc
      541 cgccacgatg gcgtggccgg ccgccacgtc ccagtcgtgc gtcggcccga gccgcggata
      601 gaggtcggcg ccgccttcgg ccacccggca gaatttaatt gctgaaccgg acgccacccg
      661 ccgcgctccg ggccagcgct tgagataggc ctccgtccgg gcatcgaggt gcgatcggct
      721 caccatgacc agcaggtcgg cgccggggcg gggccgcgtt cggattctct ccggcggaga
      781 cgttcgtccg gcgaaaaatt gcaaccgctc ggcgccgcgg ccgacgacgc cgcgccagat
      841 gcgcccgagc gccggcgccg tgatgacgcc ggcggcgggg gcgccgtcgg caactaggcc
      901 tatattgatt gcgtactcgt cgcggccggc gatgaactcg cgcgtgccgt cgagcggatc
      961 gaccagaatg aagcttggcg ccgcgatgct cgccccggcg aggtcagcac tttcctcgga
     1021 gatgaccgga agcggaagcc cgagccgtgc caggccgtcg cggatcacgg cttcggcggc
     1081 ctcatccgcc gcggtcaccg gcgagccgtc ggccttgagc cgaacgcccc tgtccgcggg
     1141 catgctgcgg atcgcttccg ccgcggcaat gctgattgcg gtcagctcct ccaggagcgc
     1201 ggcacaggcg gcagagtcga aattggacac ggggcgctcc cggcttccgg ccgcagcaat
     1261 atcgaggcgc gccggcaaag ggggagccgt ttaccatagc ccggcgcaaa cggcacgatt
     1321 gccgaatcgc gccggttatg acaggcacgc ccttggcgtc ctgctcaagc ggagctgctc
     1381 atgtccgccc ctgtttccgg tcccatcgcg gttggagccc tcgatcttgc ggcgctgctg
     1441 tgctcgcgcg tctgccatga cttgatcagt ccggtgggcg cgatcgtcaa cggcatcgaa
     1501 gtcctcgatg aaggaaaaga cgaggagacg aagacatttg cgctcgacct gatccgcaag
     1561 agcgcggcgc aagcgtccgc caagctgcaa ttttgccgga tggcgttcgg cgccgccggt
     1621 tccgccggcg cccagatcga actcggtgac gcggaaaaga ccgcccgcgg gctcctcgag
     1681 gacggcaaga tcaccctggt ctggaatctg ccgtgcgagt tgatgccgaa gaatcgggtg
     1741 aaactcctca tgaacatgct catgctcgcg gcggccgcca tcccgcgcgg cggcgtactg
     1801 acggccgatc cgatcgccgg cgcggagggg ggagcggggt tcgcggtgag agcgtccggc
     1861 cttaatgccc gtttgcccgc cgccaccgcg gaactggtca gcggcagccc ggcacaggcc
     1921 gtcgatgccc atgtcatcca gccgttttac gccggcatcc tggcccggga ctgcgggctc
     1981 gtcctttccg ccggcagcga gggcgaggcc gtcgtgctaa cggcgcgctg acggttttcc
     2041 gcggtcgcag agcgggcggt agcgtactcc ttctccgcaa ccgaaattaa accctttggc
     2101 aacacactgg ccatggatgg ccgggcgccg cttcgcgccc ggcggcgaaa gcgcgcgcaa
     2161 tgcgggcgcc gacgggtagc gtgagtcgtg cgaggcgcca gtagatggac gacctgctcc
     2221 gggaattcct caccgagacc aatgagagtc tcgatcgggt cgatgccgag ctggtgctcg
     2281 atctgcagtc cgcggccggc gtcggcaccg cctttacgat caagattcct ctcaccctgg
     2341 cgatcgtctc ctcgctcctc gtcgaggccg gcggcgagcg cttcgccatg ccgcagctct
     2401 cggtgctcga gctcgtgcag gcgggcaatg gc
//
LOCUS       DATMQB010000403         5303 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_178076, whole genome shotgun sequence.
ACCESSION   DATMQB010000403 DATMQB010000000
VERSION     DATMQB010000403.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5303)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5303)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5303
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_178076"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..443)
                     /locus_tag="VNY79_11485"
     CDS             complement(<1..443)
                     /locus_tag="VNY79_11485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M24 family metallopeptidase"
                     /protein_id="HWX73116.1"
                     /translation="MTYVDAALAPLRKTGQIKIHGPAAFDGMRKAGALAAECLDMLAG
                     EIRPGITTERVDRLVYEFGHDHGALPATLMYRGYRKATCTSINHVVCHGIPVEKPLRE
                     GDIVNVDVTLILDGWHGDSSRMYSIGEIPRRAERLLEVTYEAMMRG"
     gene            complement(571..1287)
                     /gene="sfsA"
                     /locus_tag="VNY79_11490"
     CDS             complement(571..1287)
                     /gene="sfsA"
                     /locus_tag="VNY79_11490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019401241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000023 - maltose metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA/RNA nuclease SfsA"
                     /protein_id="HWX73117.1"
                     /translation="MRYSSTLIPGTLARRYKRFLADVVLESGEMTTVHVANPGAMTGL
                     DRPFSRVWLSGSDNPLRKLPLTWELVETDLGSGIEFVGVNTQQPNTLVAEALKEGLIP
                     ELRHYTSVRPEVKYGARSRVDFLLESPSRRPCCLEVKNVHLMRKPRVAEFPDCVTDRG
                     AKHMEELAAAIGSGARAVVLFVIQIASADRFAVARDIDPAFAAAFHVARGQGVQMLAW
                     RCNVNLNGIEIAAPVPIIDE"
     gene            complement(1372..2127)
                     /locus_tag="VNY79_11495"
     CDS             complement(1372..2127)
                     /locus_tag="VNY79_11495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012335666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HWX73118.1"
                     /translation="MSGRLQGKVALVTAAGQGIGRAIAEKFAGEGAKVIATDLDPNKL
                     EGLRAKLRKLDARSQDDIDALGRDVGREFGPLDILVNCAGYVHHGTVLDCGDKDWEFS
                     FDLNVKSMHRTIKTFLPAMLEKKAGSIVNIASTASSIRGIPNRYVYGTTKAAVIGLTK
                     AVAADFIKQGIRCNAICPGTIESPSLEERITEQSRQTGRSPDLVRQDFVARQPMGRLG
                     RPEEVAWLALFLSSDEASYITGQAYLVDGGMAM"
     gene            complement(2135..2848)
                     /locus_tag="VNY79_11500"
     CDS             complement(2135..2848)
                     /locus_tag="VNY79_11500"
                     /EC_number="2.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family protein"
                     /protein_id="HWX73119.1"
                     /translation="MTAFEAHPRTGQPVGLPVAKTTPAPRPGPVTLKGRYGRLEKLAL
                     AHATDLWSAFAGHDHVWTYIARDGPFADAAAFLSFLGERAASQDPYAYAIIDTADRAV
                     GYVTLLRIVPDMRVIEVGHVLYSPALQRTPLGTETQYLLARYVFETLGYRRYEWKCDA
                     LNAASRRAALRYGFVYEGTFRQYMIAKGRNRDNAWYSMLDGEWPKRKRNFERWLAPEN
                     FDSEGLQRTSLAALNGQKA"
     gene            complement(2845..3693)
                     /locus_tag="VNY79_11505"
     CDS             complement(2845..3693)
                     /locus_tag="VNY79_11505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HWX73120.1"
                     /translation="MDNLRPSVADKRQTFRKLHEAGCFVIPNPWNVGSARYLQGLGFK
                     ALATTSSGHAHAQGHPDGAQNRNDVLAHFRELVEATDIPVNGDFENGFADDPSGVAEN
                     VTRCIATGVAGLSIEDSPKSTTPLYDLDLAVARVKAARAAIDSAGGDVVFTARAENFI
                     RGVPDLDDAIRRLKAYKAAGADCLYAPGIATREQIEAVVKAVAPTPVNFLNGGALGFT
                     VNDIAAMGVRRISVGGSLARVAMDAFVRTATAIAKEGRFDGFAGLISNAELNRFFRED
                     RKKLSS"
     gene            complement(3708..>5303)
                     /locus_tag="VNY79_11510"
     CDS             complement(3708..>5303)
                     /locus_tag="VNY79_11510"
                     /EC_number="4.2.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019402170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016836 - hydro-lyase activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="IlvD/Edd family dehydratase"
                     /protein_id="HWX73121.1"
                     /translation="LAKRVRAGIHDAGGLAFEFPVHPIQETGKRPTASLDRNLAYLGL
                     VEVLYGYPLDGVVLTTGCDKTVPACLMAAATVNTPAIVLSGGPMLDSYRDGERAGSGV
                     VVWQARQDLAADKIDYKRFIDIVAASAPSIGHCNTMGTASTMNAMAEALGMSLPGCGA
                     IPAPYRERGQIAYETGRRAVEIVREDLKPSDILTRAAFENAIVACSAIGGSTNAPIHL
                     VAIARHVGVKLTVEDWETVGYDVPLLLNMQPAGEYLGEEYYRAGGLPAVMSELLAAGR
                     LNGNALTINGKTVAENVAKAKVTNAEVIRPYNKPLRAKAGFKVLRGNLFDSAIMKTSG
                     ISEEFQQRYLNDPKDPNAFEGRAVVFDGPEDYHHRIDDPKLAIDERTILFMRGAGPIG
                     HPGAAEVVNMQPPAALIKRGITSLPCIGDGRQSGTSASPSILNASPEAAAGGGLALLK
                     TGDRVRIDLNKGTADILIPPAELESRRAALKKNGGYPYPPSQTPWQEIQRAMVDQLGE
                     GMVLEPAVKYQHVAQKYVPRDNH"
BASE COUNT          856 a         1703 c         1813 g          931 t
ORIGIN      
        1 ccgcgcatca tcgcttcgta ggtcacttcc agcaggcgct cggcgcggcg cggaatctcg
       61 ccgatcgagt acatgcggct cgaatcgccg tgccagccgt cgaggatcag cgtcacgtcg
      121 acattgacaa tgtcgccctc gcgcaggggc ttctcgaccg ggatgccgtg gcagaccacg
      181 tgattgatcg acgtgcaagt cgccttgcgg tagccgcggt acatgagcgt tgccggcagg
      241 gcgccgtggt cgtggccgaa ctcgtagacc agccgatcga cccgctcggt ggtgatgccg
      301 ggcctgatct cgccggcgag catgtcgaga cattcggccg ccagcgctcc cgccttgcgc
      361 atgccgtcga acgcggcggg gccgtgaatc ttgatctgtc cggtcttgcg cagcggcgcg
      421 agggccgcgt cgacataggt catgacgctc tggaggttca gccgcaacga aagcggccgc
      481 gagccgccgc tcgacccgca atgtaagcat gcgcgcgtcc aacgcaagca atctgcgacc
      541 gctgcaggag cgcccgcctg gaggcgcaat ttactcgtcg atgatcggaa cgggcgcggc
      601 gatctcgatg ccgttgaggt tcacattgca gcgccacgcc agcatctgca ccccttgccc
      661 gcgcgccacg tggaaggccg cggcaaaggc cgggtcgatg tcgcgggcga cggcgaagcg
      721 atccgcggac gcgatctgga tgacgaacag cacgacggcg cgcgcaccgc ttccgatcgc
      781 cgcggcgagt tcctccatgt gcttggcgcc gcggtcggtc acgcaatcgg gaaattcggc
      841 cacacgcggc ttgcgcatga ggtgcacgtt cttgacctcg aggcagcagg gccgccgcga
      901 tgggctttcg agcagaaaat cgacgcgcga tctggcgccg tatttcactt ccgggcgcac
      961 cgacgtgtaa tggcgcagct ccggaatgag cccctctttg agggcctcgg cgacaagcgt
     1021 attgggctgc tgggtgttga ccccgacgaa ctcgatgccg ctgccgaggt cagtctcgac
     1081 gagttcccac gttagcggga gcttccgcaa cggattgtca gaaccggaca gccacacccg
     1141 cgagaacggc cggtcgaggc cggtcatggc gcccggattg gcgacatgga ccgtggtcat
     1201 ctcgccgctt tcgagcacca cgtcggcgag gaatcgcttg tagcggcggg cgagcgtgcc
     1261 ggggatgagg gttgaactgt atcgcatcac agcacatcag cgccggcggc aggcgacgga
     1321 ggcgctttat gctcgggatc tagggttgat gccggagccc ggcgaccttt gttacatcgc
     1381 catgccgcca tcgacaagat aggcctgccc ggtaatgtag ctcgcctcgt cactgctgag
     1441 gaagagtgcg agccacgcga cctcctcggg ccgccccagc cggcccatcg gctggcgcgc
     1501 gacgaagtcc tggcgcacga gatcaggcga gcgcccggtc tggcgcgact gctcggtgat
     1561 gcgctcctca agcgagggcg attcgatcgt tccggggcag atggcattgc agcggatgcc
     1621 ctgtttgatg aaatcggcgg cgacagcctt ggtgaggccg atgactgcgg ccttcgtggt
     1681 gccgtagacg tagcggttgg gaatgccgcg aatcgacgag gccgtggagg cgatgttgac
     1741 gatcgacccg gccttctttt ccagcatggc cggcaagaaa gtcttgattg tacggtgcat
     1801 cgatttcacg ttgagatcga aggaaaactc ccagtccttg tcgccgcaat cgagcaccgt
     1861 gccgtgatgg acatagccgg cgcagttgac cagaatatcg agcggcccga attcgcggcc
     1921 gacgtctctg ccgagcgcgt cgatgtcgtc ctgcgagcgc gcgtcgagct tgcgcagctt
     1981 ggcgcgcaat ccctcaagct tgttcgggtc gagatcggtc gcgattacct tggcgccttc
     2041 gccggcgaat ttctccgcga tggcgcggcc gatgccctgc ccggcggcgg tgacgagcgc
     2101 gacctttccc tgcagcctgc cgctcatgcg cgccttacgc cttttgcccg ttcaacgccg
     2161 cgagacttgt gcgctgcagg ccttcactat cgaaattctc cggcgcgagc cagcgctcga
     2221 agttgcgctt gcgcttcggc cattcgccgt cgagcataga gtaccaggcg ttgtcgcggt
     2281 tgcggccctt ggcgatcatg tactggcgga acgtcccttc atagacgaac ccgtagcgca
     2341 gggcggcgcg ccgtgaagct gcgttgagag cgtcgcattt ccactcgtag cgccggtagc
     2401 ctagagtctc gaagacgtaa cgcgccaaca ggtattgggt ttctgtgccg agcggcgtgc
     2461 gctgcagcgc cggcgagtag agcacatggc ccacctcgat gacccgcatg tccggcacga
     2521 tccgcagcaa tgtcacgtag cccacggcgc gatcggcggt gtcgatgatc gcataggcat
     2581 aagggtcttg cgatgctgcg cgctcgccca gaaaagataa gaacgcggcc gcgtcggcga
     2641 acggcccgtc gcgcgcaata taggtccaca cgtgatcgtg cccggcgaac gccgaccaca
     2701 ggtccgtagc gtgcgcaagc gcgagcttct ccaatcgtcc gtagcggccc ttgagcgtca
     2761 ccgggccggg acgcggcgcc ggtgtcgtct tcgcgaccgg cagaccgacc ggctggccgg
     2821 ttcgcggatg ggcttcgaag gcggtcaaga cgaaagcttc ttgcggtctt cgcggaagaa
     2881 cctgttcagc tccgcattgg aaatcagccc ggcgaagccg tcgaaccggc cttccttcgc
     2941 gatcgcggtc gcggtgcgga cgaaggcgtc catcgccacg cgcgccagcg agccgccgac
     3001 actgatccgg cgcacgccca tcgcggcgat atcgttcacc gtgaagccga gcgcgccgcc
     3061 gttgaggaaa ttcaccggcg tcggcgccac cgccttgacc accgcctcga tctgctcgcg
     3121 cgtggcgatg cccggcgcgt acaggcaatc ggcgccggcc gccttgtagg ccttgagccg
     3181 gcggatagcg tcgtcgaggt cgggcacccc gcgaatgaag ttttccgcgc gcgcggtgaa
     3241 caccacgtcg ccgccggcgc tgtcgatggc ggcacgcgcg gccttcacgc gggcgaccgc
     3301 gaggtcgagg tcgtaaagcg gcgtcgtgct cttcggcgaa tcctcgatcg acaggccggc
     3361 caccccggtt gcgatgcagc gggtgacgtt ctcggcgacg ccgctcggat catcggcaaa
     3421 gccgttctcg aaatcgccat tcacgggaat gtcggtcgcc tccacaagct cgcggaaatg
     3481 cgccagcaca tcgttacggt tctgtgcgcc gtcggggtgg ccttgcgcgt gggcgtggcc
     3541 ggaactcgtc gtcgccaaag ccttgaagcc gaggccctgg agatagcgcg cgctgccgac
     3601 attccacggg ttggggatga cgaagcagcc ggcctcatgg agcttgcgaa acgtctggcg
     3661 cttgtcggcg acggaaggcc gaagattgtc catcggaggc ccgctggtca gtgattgtcg
     3721 cgcggcacgt acttctgcgc cacgtgctgg tatttcaccg ccggctcaag caccatgcct
     3781 tcgccgagct gatcgaccat ggcacgctgg atctcctgcc acggcgtctg gctcggcggg
     3841 taaggatagc cgccgttctt cttcaacgcc gcgcgccgcg actcaagctc cgccggcggt
     3901 atcagaatgt cggcggtgcc cttgttgaga tcgatacgga cgcggtcgcc ggtcttgagc
     3961 agcgcgagtc cgccgccggc cgccgcctcg ggcgaggcgt tgaggatcga aggcgaggcc
     4021 gacgttcccg attggcggcc gtcgccgatg catggcagcg aagtgatgcc gcgtttgatc
     4081 agcgcggccg gcggctgcat gttcaccacc tcggctgcgc ccgggtggcc gattggcccg
     4141 gcgccgcgca tgaacaggat cgtgcgttcg tcgatcgcga gcttcggatc atcgatgcga
     4201 tggtgatagt cctcgggccc gtcgaacacc acggcgcggc cttcgaaggc attcggatcc
     4261 ttcgggtcgt tgagatagcg ctgctgaaac tcctcggaga tgccgctcgt cttcatgatc
     4321 gcggaatcga acagattgcc gcggagcacc ttgaaacccg ccttcgcccg cagcggcttg
     4381 ttgtacgggc ggatgacctc tgcgttggtg accttggcct tggcgacgtt ctcggcgacg
     4441 gtcttgccgt tgatggtgag cgcgttgccg ttgagccggc cggccgcgag cagttcgctc
     4501 atcaccgccg gcagcccgcc ggcgcgataa tattcttcgc cgagatattc gcccgccggc
     4561 tgcatgttga ggagcagcgg cacatcgtag ccgaccgtct cccagtcctc gaccgtgagc
     4621 ttgacgccga catggcgcgc gatggcgacg aggtgaatgg gcgcgttggt cgagccgccg
     4681 atggccgagc aggcgacgat cgcgttctcg aatgcagccc gggtgagaat gtcggagggc
     4741 ttgaggtctt cgcgcacgat ctcgaccgcg cgccggccgg tttcgtaggc gatctgcccg
     4801 cgctcgcgat agggcgccgg gatcgcgccg cagccgggga gcgacatgcc gagcgcctcg
     4861 gccatggcgt tcatggtcga ggcggtgccc atcgtgttgc agtgaccgat cgagggcgcg
     4921 gaggcggcga cgatgtcgat gaaccgcttg tagtcgatct tgtcggcggc gaggtcctgg
     4981 cgcgcctgcc agacgaccac gcccgaaccg gcacgctcgc cgtcgcggta gctgtcgagc
     5041 atcggcccgc cggagagcac gatcgccggc gtgttgaccg ttgccgcggc catgaggcag
     5101 gcggggacgg tcttgtcgca gcccgtggtc agcaccacgc cgtcgagcgg atagccgtac
     5161 agcacctcga ccaggccgag gtaggcgagg ttgcggtcga gcgacgcggt cggccgcttg
     5221 ccggtctcct ggatgggatg gaccggaaat tcgaaggcaa ggccgccggc gtcgtgaatg
     5281 cccgcgcgga cgcgcttggc gag
//
LOCUS       DATMQB010000404         5866 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2347150, whole genome shotgun sequence.
ACCESSION   DATMQB010000404 DATMQB010000000
VERSION     DATMQB010000404.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5866)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5866)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5866
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2347150"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            222..1703
                     /gene="cysS"
                     /locus_tag="VNY79_11515"
     CDS             222..1703
                     /gene="cysS"
                     /locus_tag="VNY79_11515"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0004817 - cysteine-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006423 - cysteinyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HWX73122.1"
                     /translation="MELKLYDTLTREKRVFTPLDPADVRMYVCGPTVYDFAHIGNARP
                     VIVFDVLFRLLRHLYGADHVTYVRNITDVDDKINARAAEGYPGQPLNEAIRKVTEATD
                     RQFHEDVAALGCLPPTVEPRATEHIAEMRALIERLVASGHAYVANDHVLFSVASMPDY
                     GRLSKRPLDEMIAGARVEVAPYKRDPMDFVLWKPSKPGEPDWPSPCGISAPGRPGWHI
                     ECSAMSDKWLWTEALSKLSASGRAHPHQFDIHGGGIDLVFPHHENEIAQSRSAFHTPA
                     MANFWMHNGFLQVEGEKMSKSLGNFVTIHELLHTAKFGSNQWHGHVLRLAMLMTHYRQ
                     PIDWTVDRLVEARRTLKEWIDCAEGFDQYPAPVPTELISALSDDLNSPAALTVTSQLF
                     RDTRRRTNPEASIQLAAALKWLGIWNGEYSNEVYTYGIEVGAGPAEADVRPFIEARNA
                     ARKAKDFKEADRIRNELAKMHVMVKDSKDPNTGEPVTTWEYVP"
     gene            1730..2218
                     /locus_tag="VNY79_11520"
     CDS             1730..2218
                     /locus_tag="VNY79_11520"
                     /EC_number="2.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HWX73123.1"
                     /translation="MRPMLPQDVPLLAEIFRASIQELTGDDYSEAQQEAWAQAADDVE
                     AFGARLAVELTLVATHGGSPVGFAALADNVRIDMLYVHPAAAGQGAGNMLCDALEKLA
                     AARGTKELTVEASDTARSFFERRGFAARTRNTVLSAGEWLANTTMVKPLAAAAAAKRS
                     AS"
     gene            2215..2337
                     /locus_tag="VNY79_11525"
     CDS             2215..2337
                     /locus_tag="VNY79_11525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73124.1"
                     /translation="MKRRDVPFQRHWLYYVILKYAVIAVAVAVTFYTALRLYSG"
     gene            2343..3938
                     /gene="cimA"
                     /locus_tag="VNY79_11530"
     CDS             2343..3938
                     /gene="cimA"
                     /locus_tag="VNY79_11530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043714 - (R)-citramalate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009097 - isoleucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citramalate synthase"
                     /protein_id="HWX73125.1"
                     /translation="MPRERLYLFDTTLRDGAQTNGVDFTLADKLAIARMLDELGVDYV
                     EAGYPGANPIDTSLFAERRPLRAKVTAFGMTRRPGRSAANDPGLAALLAAEADAVCFV
                     AKSSDYHVRVALETSAEENLAAIRDSVRAATAKGREVLLDCEHFFDGYKANLPYALAC
                     ARAAYDAGARWVVLCDTNGGTLPHEVEKIVGEVCRQIPGDRVGIHAHNDTEQAVANSF
                     AAVRAGARQIQGTLNGLGERCGNANLASIIPTLKLKAEYAERFEIGVSDAALGQIARV
                     SRALDDLLNRAANRHAPYVGESAFATKAGIHASAIMKEPATYEHIAPERVGNKRKLLV
                     SDQSGRSNLIAELERIGLAVDRDDPRLSRLLDAVKEREALGYAYESADASFELLARRL
                     LGKVPRYFDVEKFDVNVEQRINAKGERVTVSMAVVKVKVGGEALISAAEGNGPVNALD
                     LALRKDLGKYQSYIAGLELTDYRVRILNAGTEAVTRVLIESADEDGDHWTTVGVSANI
                     IDASFQALMDSIVYKLVKSGAPA"
     gene            4012..4401
                     /locus_tag="VNY79_11535"
     CDS             4012..4401
                     /locus_tag="VNY79_11535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HWX73126.1"
                     /translation="MIDHVSVAVRDIHAAESFYSALLAPLGMTKLHEWPNAAVGFGKK
                     YPEFWINARAAMDRVAEDSGAHVCLRAPDAEAVDAFHAAALRAGGTSYGAPGLRPAYH
                     QTYYATFIRDQDGNRIEAVTFLRDSPR"
     gene            4641..5554
                     /gene="ltnD"
                     /locus_tag="VNY79_11540"
                     /pseudo
     CDS             4641..5554
                     /gene="ltnD"
                     /locus_tag="VNY79_11540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011925581.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="L-threonate dehydrogenase"
     gene            5766..>5866
                     /locus_tag="VNY79_11545"
     CDS             5766..>5866
                     /locus_tag="VNY79_11545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015888097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldolase"
                     /protein_id="HWX73127.1"
                     /translation="MPHLNESKLREEICRLGESLFTRGLTFGSAGNI"
BASE COUNT         1096 a         1877 c         1869 g         1024 t
ORIGIN      
        1 ggcgccgtga cattcgcgcc acgcggcgaa cgacgcgcgg cgaatggctt gacgcgctcg
       61 ccgtcctcga ccattgtgcg cgccatgagc ggccttaact caatctgcgg catttgccgg
      121 gagattattc gctagcgatc aacgctggct gcggccgtct tttctcagca tcgagaccaa
      181 tgacgccggg ccagcagggc cgaggtgcgt ggttcgattc gatggaactc aagctctacg
      241 acacgctgac acgcgagaag cgggtcttta ccccgctcga tcccgccgac gtgcgcatgt
      301 atgtgtgcgg gccgacggtc tacgactttg cccatatcgg caatgcgcgg ccggtcatcg
      361 tgttcgacgt gctgttccgc ctgctgcgcc acctctacgg cgccgatcat gtcacctacg
      421 tacgcaacat caccgacgtc gacgacaaaa tcaacgcgcg cgcggcggag ggatatcccg
      481 gccagccgct caacgaggcg atccgcaagg tcacggaagc aaccgaccgc cagtttcacg
      541 aggacgtggc cgcgctcggc tgcctgcccc cgaccgtcga gccgcgcgcg accgagcaca
      601 ttgccgagat gcgcgcgctg atcgagcggc tcgtcgcctc cggccatgcc tatgtcgcga
      661 acgatcacgt gctgttcagc gtggcttcga tgccggacta cggccggctg tcgaagcggc
      721 cgctcgacga gatgatcgcc ggcgcccgcg tcgaggtcgc gccctacaag cgcgacccga
      781 tggatttcgt gctgtggaag ccatcgaagc cgggcgagcc agactggccg tcgccgtgcg
      841 gcatcagcgc gcccgggcgc cccggctggc atatcgaatg ctcggcgatg tccgacaaat
      901 ggctgtggac cgaagcgctt tccaagcttt cggcgagcgg ccgcgcgcat ccgcatcagt
      961 tcgacatcca cggcggcggc atcgatctcg tgttcccgca ccacgagaac gaaatcgccc
     1021 agtcgcgctc cgcttttcac accccggcga tggccaattt ctggatgcac aacggcttcc
     1081 ttcaggtcga aggcgagaag atgtcgaagt cgctcggcaa tttcgtgacg attcatgaac
     1141 tgcttcacac tgccaagttt ggatcaaacc aatggcatgg tcatgtactg cggcttgcaa
     1201 tgctgatgac tcactatcgg caacctatcg attggacggt cgaccggctg gtggaagcga
     1261 gacgcacact gaaggaatgg atcgattgcg cagaaggatt tgatcagtat cctgcgccgg
     1321 tgccaactga actgatttcg gctctctctg atgacttaaa ctctccagca gcattgaccg
     1381 tcacgtctca actttttcgg gacacgcgtc gtcgcacgaa tcccgaagcc tcaatccagc
     1441 tagcggcggc cttgaagtgg ctaggcattt ggaacggaga gtattcgaac gaggtctata
     1501 cctatggaat agaagttgga gccggaccgg cggaggcgga cgttcgtccc tttattgaag
     1561 cacggaatgc cgcgcgcaaa gcaaaagact tcaaagaagc agatcgcata cgtaacgaac
     1621 ttgcaaaaat gcatgtgatg gtgaaagaca gcaaagatcc aaatactgga gaacccgtca
     1681 ccacgtggga atacgttcca tgacccgccg cacgcaggaa aaactcgcga tgcgccctat
     1741 gctgccgcaa gatgtgccgc tcctggcgga gattttccgg gccagcatcc aggaattgac
     1801 cggcgacgat tacagcgagg cgcagcagga ggcgtgggcg caggcggcgg acgatgtcga
     1861 ggcgttcggc gcgcggcttg ccgtcgagct gacgctggtc gccacccatg gcggctcgcc
     1921 ggtcgggttt gccgcgctcg ccgacaatgt gcgcatcgac atgctctacg tgcatccggc
     1981 ggcggccggg cagggcgccg gcaacatgct ctgcgacgcg ctggagaagc tcgccgccgc
     2041 gcgcgggacc aaagagctca ctgtcgaggc aagcgacacc gcccgcagct tcttcgagcg
     2101 gcgcggcttt gccgcgcgca cgcgcaacac ggtccttagc gccggcgaat ggctcgccaa
     2161 caccacgatg gtcaagccgc tcgccgcggc tgccgccgcc aaacggagcg cgtcatgaaa
     2221 cgccgcgacg tgccgttcca gcgccattgg ctctattatg tgatcctgaa atacgcggtg
     2281 atcgcggttg cggtcgcggt gaccttctac accgcgcttc ggctctattc gggctgaaga
     2341 gcatgccgcg cgagcgtctt tatctgttcg acaccacgct gcgcgacggc gcgcagacga
     2401 atggcgtcga tttcaccctc gccgacaagc tcgccatcgc ccgcatgctc gacgaactcg
     2461 gcgtcgacta cgtcgaggcc ggctatcccg gcgccaatcc gatcgacacg agtttattcg
     2521 ccgagcggcg gccgctcagg gcaaaagtca ccgcattcgg catgacgcgc cggcccggcc
     2581 gttcggcggc gaacgatccg ggccttgccg cgctccttgc cgccgaggcc gacgcggtct
     2641 gcttcgtcgc caaatcctcc gactaccacg tgcgcgtcgc gctcgagacc agcgcggagg
     2701 agaacctcgc cgcgatccgc gacagcgtgc gcgcggccac ggcaaagggc cgcgaggtgc
     2761 tgctcgattg cgagcatttc ttcgacggct acaaggcgaa cttgccctac gcgcttgcct
     2821 gcgccagggc cgcctacgat gccggcgccc gctgggtcgt gctctgcgac accaacggcg
     2881 gcacgctgcc gcacgaggtc gagaagatcg tcggcgaggt ctgccggcag attcccggag
     2941 accgtgtcgg cattcacgcc cacaacgaca ccgagcaggc ggtggcgaac agctttgccg
     3001 cggtgcgtgc cggcgcgcgg cagatccagg gcacgctcaa tggcctcggc gaacgctgcg
     3061 gcaacgccaa tctcgcctcc atcattccga cgctgaagct caaggccgaa tatgccgagc
     3121 gcttcgagat cggtgtatcg gacgcggctc tcggccaaat cgcgcgcgtg tcgcgcgcgc
     3181 tcgacgacct cctcaatcgc gccgccaacc gccacgcgcc ctatgtcggc gagagcgcct
     3241 tcgcgaccaa ggcgggcatc catgcctccg ccatcatgaa ggagccggcg acctacgagc
     3301 acatcgcgcc cgagcgcgtc ggcaacaagc gcaagctcct cgtctcagat caatccggcc
     3361 gctcgaacct catcgccgag ctcgagcgca tcggcttggc ggtggacagg gacgatccgc
     3421 ggctttcgcg cctgctcgac gcggtcaagg aacgcgaggc gctgggttac gcctatgagt
     3481 cggcggacgc ctcgttcgag ctcttggcgc ggcggctcct cggcaaggtg ccgcgctact
     3541 tcgacgtgga gaaattcgac gtcaatgtcg agcaacgcat caacgccaag ggcgagcgcg
     3601 tcaccgtgag catggcggtg gtgaaggtga aggtcggcgg cgaggctctg atctcggccg
     3661 ccgaaggcaa tggcccggtc aacgcgctcg acctcgcgct gcgcaaggac ctcggcaagt
     3721 atcaaagcta catcgccggg ctcgaactca ccgattatcg agtccgcatc ctcaacgccg
     3781 gcacagaggc ggtgacgcgc gtgctcatcg agagcgccga cgaggacggc gatcactgga
     3841 ccacggtcgg cgtgtccgcc aacatcatcg acgcctcgtt ccaggcgctg atggattcga
     3901 tcgtctacaa gctcgtgaag tcgggggcgc cggcgtgagg agaaagccgt cattccgggg
     3961 cgccgcttcg cggctccgga atgaccggtg agtgaattcg cgaggacttt catgatcgac
     4021 cacgtctccg tcgcggtgcg cgatatccat gcggccgaat cgttctacag cgcgctgctc
     4081 gcgccgctcg gcatgacgaa gctgcacgaa tggccgaacg cggccgtcgg ctttggcaag
     4141 aaatatccgg aattctggat caacgcccgc gcggcgatgg accgcgtcgc cgaggacagc
     4201 ggcgcgcatg tttgcctgcg cgcgcctgac gccgaagcgg tcgacgcctt ccacgccgcc
     4261 gcactcaggg ccggcggcac ctcttatggc gcgcccggcc tgcggcccgc ataccaccag
     4321 acctactacg caaccttcat ccgcgatcaa gacggcaacc gcatcgaggc ggtgacgttt
     4381 ctgcgcgaca gcccgcgtta gcaggcccgg gagcaccgga ttggcgcagg cggtgcgttc
     4441 ctgcgcgaca gtgaagctca gtgtcatttg ctgccccatg acgtggtgta ttgcgacgaa
     4501 ggaaagctaa agcctcagcg gcctgctgcc atcggtccgc caacaccgca gacatcccgg
     4561 gtcgaccacg ctaaagtaat tgcgcggtaa aactaacctg ggacccccag cgcgatctcc
     4621 aggcgcaatt ggtgtgagca atgaaagctg ctgttgtgag ccgggcggcg gtgatcggcc
     4681 tcggttcgat gggaatgggc atcgcgcatt cgcttcgacg tgccgggttc gacgtcgttg
     4741 gctgcgacgc caatcgggtt actgtcgagc gcttcgtgcg agagggaggg cagggcgtac
     4801 cggacccggc gtcggcggcc gccaacgttg acgtactgat ttgcgtagta gtgaacgcgg
     4861 cgcagacgga agccgtgttg ttcggcgaaa atggggtggc cgcaagtatg cccgagggcg
     4921 cagtcttcat ctcgtcagcg acgatggatc caggtgccag cctgcgcctc gcaagccggc
     4981 tagaggccgg cgggcgcctt tacctggatg ctcctatcag cggcggcgcg gcgcgcgcgg
     5041 ctgacggcac gctaaccgtt ctcgcgtcgg gggcgcgcgc tgctttccgg cgctcgaggc
     5101 catggcggct aaggtgcacg atcttggctc ggaagtcggc ctcggctcgg ccttcaagat
     5161 gatcaatcaa cttctcgctg gggtgcacat cgcggtcgcg ggtgaggcaa ttgcttttgc
     5221 cgccaagcag ggcctcgacc tgcgcaaggt gtacgaggtc attaccggat cggctggcaa
     5281 ttcctggatg ttcgaaaacc gcatacccca tgtgctcgac ggtgattacg cgccgcgaag
     5341 cgcagtcgat atcttcgtga aggatctcgg cattgtccag gacatggcgc gggagttcag
     5401 ataccccgtg ccgctggctg cagcggccct gcaggtgttc ttgatggcat cgggtgccgg
     5461 catgggccgc gatgacgatg cctcggttgc gcgaatctac gcgcgcctca ctggcacgac
     5521 gctgccgcaa gagttcgtca ccgaccagag ttgaaattgt cgcccccgcg aactcgctgt
     5581 agaacgtcgg ctcgacttcg agatgacctg ctcgacaaca tcggcattga gacgattgag
     5641 cggacgagtt ggcgaacatg ctgaataacg gcgacgacga ggatgaagcc agacggccgc
     5701 acaccgtttc gcagtggttg gggattcgcc attgaccgcg aggtgttctt catgagggca
     5761 ttcacatgcc tcatctaaac gaatcaaaat tgcgcgagga aatttgccgg cttggcgaat
     5821 cgctgtttac gcgcggactg accttcggca gtgccgggaa catcag
//
LOCUS       DATMQB010000405         5975 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3292814, whole genome shotgun sequence.
ACCESSION   DATMQB010000405 DATMQB010000000
VERSION     DATMQB010000405.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5975)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5975)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5975
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3292814"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..383)
                     /locus_tag="VNY79_11550"
     CDS             complement(<1..383)
                     /locus_tag="VNY79_11550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018428950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HWX73128.1"
                     /translation="MKPGHMHLPADCRAVSDVLARIGDKWSVLVVSRLGDGPLRFSEL
                     RRSIRGISQRMLTLTLRGLERDGLITRTVFPTIPPRVDYALTPLGRDLLNPVSALGAW
                     AIRNQPKIARARERFDENCAASGKSP"
     gene            462..1037
                     /locus_tag="VNY79_11555"
     CDS             462..1037
                     /locus_tag="VNY79_11555"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012047493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HWX73129.1"
                     /translation="MAKSNLAVIVGSNRRDSINRKLAHALAKLGAGSFDANFPRIDDL
                     PMFNQDLEGNLPAEVVRYKNELARADAVLIVTPEHDRSIPALLKNAVDWGARPYGKNS
                     WVGKPAFITGTSPGAIGSALAQHHLRSIMVGLGATLLGGEAYVTFKPDLVDEAGNIAD
                     EGTRQFLQGFIDRFATLVRRLTSPESARSAA"
     gene            complement(1050..1598)
                     /gene="ilvN"
                     /locus_tag="VNY79_11560"
     CDS             complement(1050..1598)
                     /gene="ilvN"
                     /locus_tag="VNY79_11560"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007196700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:1990610 - acetolactate synthase regulator
                     activity [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HWX73130.1"
                     /translation="MNAPTATTHYPAAAVSQAVESRTLCVLVDNEPGVLARVIGLFSG
                     RGYNIDSLTVSETEHEKHLSRITIVTRGTPMVIEQIKNQLERLVPVHRVIDLTTAGPA
                     LQRELAMVKVRGKGEQRMEALRLADAFRARVIDATNESFVFEITGASDKIESFISLML
                     PLGLVEVSRTGVVAISRGAEGM"
     gene            complement(1611..2252)
                     /locus_tag="VNY79_11565"
     CDS             complement(1611..2252)
                     /locus_tag="VNY79_11565"
                     /inference="COORDINATES: protein motif:HMM:NF015747.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-binding domain-containing protein"
                     /protein_id="HWX73131.1"
                     /translation="MKLAIIGAGSVGGTLGTAWAQKAGHEIFFGVRDPKSDKVRALLR
                     TLGGKAQAGTPAEAAAFGDMIVLATPWNGAEAAIRSMGNLNGKIILDATNPLAMGPDG
                     LGLEIGHDTSAGEKVQGWARGAVVFKTLNTTGYGNMADPVFRGVKSVMFVAGDDAAAK
                     PKVIALLTVLGFEVIDAGPLRNARLLEAHAMLWIELALNRGLGRDFAFAIVRR"
     gene            complement(2379..4169)
                     /locus_tag="VNY79_11570"
     CDS             complement(2379..4169)
                     /locus_tag="VNY79_11570"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012113509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003984 - acetolactate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0009082 - branched-chain amino acid
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase 3 large subunit"
                     /protein_id="HWX73132.1"
                     /translation="MVGARKKAEQAMTEMTGAEMVITALADQGVEHLFGYPGGAVLPI
                     YDALFHQNKVQHILVRHEQGAVHAAEGYARSTGRVGAVVVTSGPGATNAVTGLTDALC
                     DSIPLVVITGQVPTHLIGNDAFQECDTVGITRPCTKYNYLVKNIADLPRALHEAFHIA
                     ASGRPGPVVVDIPKDIQFAKGEYFRPREFQHRGYRPKVKGDLDKIKQAIDMMASAKRP
                     LFYTGGGLINSGRAASDLLRELLKLTGFPITSTLMGLGAFPAADRQWLGMLGMHGTWE
                     ANWAMHDCDVMIAVGARFDDRITGRLDAFSPGSKKIHIDIDPSSINKNVKVDLAIVGD
                     CAHVLEDMVRLWRASAVVPDKKAIEAWWAQIDKWRAKNSLAFRNSNEIIKPQYAIQRL
                     YELTKDRDVYITTEVGQHQMWAAQFYQFQEPNRWMTSGGLGTMGYGLPAAVGVQLAHP
                     GSLVIDIAGEASVLMTMQEMSTAVQYDLPIKIFIINNQYMGMVRQWQELLHGKRYAHS
                     YTEALPDFVKLAEAYHAHGIRCTHPGDLDEKIREMIEVKKPVLFDCVVDPAENCFPMI
                     PSGRAHNEMLLGDAAVRIEDAITEEGKVMV"
     gene            4597..5667
                     /locus_tag="VNY79_11575"
     CDS             4597..5667
                     /locus_tag="VNY79_11575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020084571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73133.1"
                     /translation="MVAEGLLCRSWPRAAAAAFAILALTVVLAAPAGATPRPVPTLTS
                     TDAMLKWINAYRGRPEPDGLPVLVRALSDLQAFKDAESSGAYVGFIAGVLSANPDHAE
                     VLVARMLPIAPADHWVLVRAIAYSGLPNWREVLATFVDRMPTRRAMIDKYLDGKLPTL
                     DQIIYRPAKPGMLDKIGEVLRINNNGKKEVAIDPSPQLIDVLWGFYLATGAYKPIERI
                     VKLLPLANDKDSVDNLTTGSAAKFTLASNAVRDLHLLALLKFAVKRQPAEDAAVLNDV
                     IETAETVDTTRMRKESLAAIDELKQKGPNSKRELTGWGQIGQGALSMGCVVAAATGQI
                     ELGIPCVIGGAAYSAGLQYIAH"
     gene            complement(5795..>5975)
                     /locus_tag="VNY79_11580"
     CDS             complement(5795..>5975)
                     /locus_tag="VNY79_11580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HWX73134.1"
                     /translation="RHLKGEMTLTQAAVEAKRDTRQYTKRQATWFRNQLPEFAWVEPQ
                     NALATVEAQLRALAK"
BASE COUNT         1011 a         1992 c         1907 g         1065 t
ORIGIN      
        1 ggagacttgc cgctcgccgc gcaattctcg tcgaaccgct cgcgggcgcg ggcgatcttc
       61 ggctgattgc ggatcgccca ggcgccgagc gccgagaccg ggttcaagag gtcgcgcccg
      121 agcggcgtca acgcatagtc gacgcgcggg ggaatggtcg gaaacacggt acgcgtgatc
      181 aggccgtcgc gctcgagccc gcgcagcgta agcgtcagca tgcgctgcga aatgccgcgg
      241 atcgagcgcc gcaactcgct gaagcgcagc ggcccgtcgc cgagccggga gacgacgagc
      301 accgaccatt tgtcgccgat ccgcgccagc acgtcgctga cggcgcggca atccgcgggc
      361 aaatgcatgt ggcctggttt catcggtgtg ccttcttgcg tgccgcctgc gcaggcacct
      421 atttagcgtc ggttatcaat tttaaccaga ggatcggcgc catggccaag tccaatctcg
      481 ccgtcatcgt cggcagcaac cgccgcgatt cgatcaaccg caagctcgcc catgcgctcg
      541 ccaagctcgg cgccggcagc ttcgacgcga atttcccgcg catcgacgat ctgccgatgt
      601 tcaaccagga cctcgaaggc aacctgcccg ctgaggtcgt gcgctacaag aacgagctcg
      661 cccgcgccga cgccgtcctg atcgtcaccc cggagcacga ccgctcgatc ccggcgttgc
      721 tgaagaacgc cgtcgattgg ggcgcccgcc cctatggcaa gaactcgtgg gtcggcaagc
      781 ccgccttcat caccggcacc tcgcccggag cgatcggcag cgcgctggcg cagcatcatc
      841 tgcgctcgat catggtcggg cttggtgcaa cactccttgg cggcgaagcc tacgtcactt
      901 tcaaaccgga cctagtcgac gaggcgggca acatcgccga cgaaggcacg cggcagtttc
      961 tgcaaggttt tatcgatcgg ttcgcgaccc tggtgcgacg cctgacatca ccggagtccg
     1021 cacgctcggc ggcgtagcag ccggcgaact cacatcccct ccgccccgcg gctgatggcg
     1081 acaacgccgg tgcgcgagac ctcgaccagg ccgagcggca gcatcaggct gatgaagctt
     1141 tcgatcttgt cggaagctcc ggtgatctcg aatacgaagc tttcgttggt ggcgtcgatg
     1201 acccgggcgc ggaaggcatc ggcgaggcgc aacgcctcca tgcgctgctc gcccttgccg
     1261 cgcaccttga ccatggcgag ttcgcgctgc agcgccggcc cggccgtggt caggtcgatg
     1321 acgcggtgca ccggcaccag ccgctcgagc tgattcttga tctgctcgat caccatgggc
     1381 gtgccgcggg tgacgatggt gatgcgcgaa agatgcttct cgtgctcggt ctcggagacc
     1441 gtgagcgagt cgatgttgta gccgcggccg gaaaaaagcc cgatgacgcg ggcgagcacg
     1501 ccgggctcgt tgtcgacgag gacgcaaagc gtgcggctct cgaccgcctg gctgaccgcg
     1561 gctgctggat agtgagtggt cgcagtgggg gcattcatgg cgggctccct tcagcgcctg
     1621 acgatcgcaa acgcaaagtc gcggccgagc ccgcggttga gtgcaagctc gatccacagc
     1681 atggcgtggg cttcgagcag gcgggcgttg cgcaacggac cggcatcgat cacctcgaag
     1741 ccgagcacgg tgaggagcgc gatcaccttc ggcttggcgg ccgcatcgtc accggcgacg
     1801 aacatcaccg acttcacgcc gcgaaacacc gggtcggcca tgttgccgta gccggtggtg
     1861 ttgagggtct tgaacaccac ggcgcccctg gcccagccct gcaccttctc gccggcggag
     1921 gtgtcgtgcc cgatctcgag gccgaggccg tccggtccca tcgccagcgg gttggtggcg
     1981 tcgaggatga tcttgccatt gaggttaccc atggagcgga tggccgcttc ggcgccgttc
     2041 cacggcgtcg ccaagacgat catatcgccg aaggccgcgg cttccgccgg cgtgccggcc
     2101 tgcgccttgc cgccgagcgt gcgcagcagt gctcgaactt tgtcggactt gggatcgcgc
     2161 acgccgaaga aaatctcgtg gccggctttc tgcgcccagg cggtgccgag cgtcccgccg
     2221 acactgccgg caccgatgat ggcgagtttc attcgactag tcctctcact tgctgcttct
     2281 tgtcgttgcg aggagcccaa gcgacgaagc aatccaaagc gtgcgacgaa agtctggatt
     2341 gcttcgcttt gctcgcaatg acgcgggccg cgattctcct acaccatcac cttgccctcc
     2401 tcggtgatcg cgtcctcgat gcgcacggcg gcatcgccga gcagcatctc gttgtgggcg
     2461 cggccggagg gaatcatcgg gaagcagttt tccgccgggt cgaccacgca gtcgaacagc
     2521 accggcttct tcacctcgat catttcgcgg atcttctcgt ccagatcgcc cggatgcgtg
     2581 cagcggatgc cgtgcgcatg gtaggcctcg gcgagcttga cgaaatcggg cagcgcctcg
     2641 gtgtaggaat gggcgtagcg cttgccgtgc agcagctcct gccactgccg caccatgccc
     2701 atgtattgat tgttgatgat gaatatcttg atcggcaggt cgtactgcac cgccgtcgac
     2761 atctcctgca tggtcatcag caccgacgcc tcgccggcga tgtcgatgac cagcgaaccc
     2821 ggatgcgcga gctgcacgcc gaccgcggcc ggcagcccgt agcccatggt gccgagcccg
     2881 cccgaggtca tccagcggtt cggctcctgg aactgataga actgcgccgc ccacatctgg
     2941 tgctggccca cctcggtggt gatgtagacg tcgcgatcct tggtcagctc gtagaggcgc
     3001 tggatcgcgt attgcggctt gatgatctca ttggaattgc ggaacgcgag cgagttcttc
     3061 gcccgccatt tgtcgatctg cgcccaccac gcctcgatcg ccttcttgtc gggaacgacg
     3121 gcgctggcgc gccacagccg caccatgtcc tcgagcacgt gcgcgcagtc gccgacgatc
     3181 gccaggtcga ccttcacgtt cttgttgatc gaggacggat cgatgtcgat gtggatcttc
     3241 ttcgaaccgg gcgagaaggc atcgagccgg ccggtgatgc ggtcgtcgaa gcgcgccccc
     3301 accgcgatca tcacgtcgca atcgtgcatc gcccagttgg cctcccaggt gccgtgcatg
     3361 ccgagcatgc cgagccactg ccgatcggcc gccggaaagg cgccgagccc catcaaggtc
     3421 gaggtgatgg gaaagccagt gagcttgagg agttcgcgca agaggtcgct ggcggcacgg
     3481 ccggaattga tcaggccgcc gccggtgtag aacagcggcc gcttggccga cgccatcatg
     3541 tcgatggcct gcttgatctt gtcgaggtcg cccttgacct tcggccgata gccgcggtgc
     3601 tggaattccc gcggccggaa atattcgccc ttggcgaact gaatgtcctt gggaatgtcg
     3661 accacgaccg ggcctggccg gccgctggca gcaatatgga acgcctcgtg cagcgcgcgc
     3721 ggcaagtcag cgatgttctt gaccaggtag ttgtatttcg tgcacggccg ggtgatgccg
     3781 accgtgtcgc attcctggaa cgcatcgttg ccgatgagat gggtcggcac ctgcccggtg
     3841 atgacgacga gcgggatcga atcgcacaag gcgtcggtga gcccggtcac cgcgttggtg
     3901 gcgcccggcc ccgaggtgac gaccaccgcg ccgacccggc cggtcgagcg cgcatagcct
     3961 tcggcggcat gcacggcgcc ctgctcgtgc cgcaccagga tgtgctgcac cttgttttgg
     4021 tggaagagcg cgtcatagat cggcaacacc gcgccacctg gatagccgaa aagatgctcg
     4081 accccctgat ccgctagcgc cgttatcacc atttctgcgc cggtcatctc cgtcatggct
     4141 tgctccgctt tctttcttgc tccgaccagt ccttcgcaac ccggccggag gaaggaattc
     4201 cggaaataaa aaaggggctt aagagcccct gatccgcgca ccgcctcgtc tcgtgggtgg
     4261 gtcatccacc cccggcggtg cgcctcgata cgagaatcag cgatgcaaca acaaaagtcc
     4321 gcacggggcg cgcctttcta tgcctagtgt gccgtttttg ctgatttgaa acttatatgc
     4381 gctgcggcat gacgtcaagc cggatgcccg caaacgatgg ccgttaactg atgaggccgg
     4441 gaaggaaccc gccccgccag gatcgccaca tctcagcccc gatttcgcgc cggaggggcc
     4501 tgcaaatcgc ccgcgcggcc tgttcagctc cgttctgctt ccaagcggca cgcgcgtgat
     4561 gtctcgcgcc gccggctttc tccgctggag ggagacatgg ttgcagaagg cttgctttgc
     4621 cggtcttggc cccgcgccgc cgccgctgca ttcgctatcc ttgcgctgac ggttgtcctc
     4681 gctgcgcccg ccggcgccac gccgcggccc gtcccgacgc tcacttcgac cgacgccatg
     4741 ctcaaatgga tcaacgccta tcgcggcagg ccggagccgg acgggctgcc ggtgttggtg
     4801 cgcgcgctca gcgatctgca ggcattcaag gacgccgaga gctcgggcgc ctacgtcggc
     4861 ttcatcgccg gggtcctcag cgccaatccc gaccatgccg aagtgcttgt cgcccggatg
     4921 ctgccgattg cgccagccga tcactgggtg ctggtgcgcg ccatcgccta ttccggccta
     4981 ccgaactggc gcgaggtact cgcgaccttc gtcgaccgca tgccgacgcg gcgggcgatg
     5041 atcgacaaat atctcgacgg caagctgccg acgctcgacc agatcattta tcggccggcc
     5101 aagcccggca tgctcgacaa gatcggggag gtgctgagga tcaacaacaa cggcaagaag
     5161 gaggtggcga tcgatccgag cccgcagctc atcgacgtgc tgtggggctt ctacctggcg
     5221 accggcgcgt acaagccgat cgagcgcatc gtcaagctgc tgccgctcgc caacgacaag
     5281 gacagcgtcg acaacctcac caccggcagc gccgccaaat tcacactcgc cagcaatgcc
     5341 gtgcgcgacc tgcacctgct cgccctgctc aaattcgcgg tcaagaggca gcccgcggag
     5401 gacgctgccg tgctcaatga cgtgatcgaa acggccgaaa cggtcgacac cacgcgcatg
     5461 cgcaaagagt cgctcgccgc catcgatgag ctcaagcaga aggggccgaa ctctaagcgc
     5521 gaactcaccg gctggggcca gatcggccag ggcgcgctgt ccatgggctg cgttgtcgcc
     5581 gccgcgaccg ggcagatcga gctcggcatc ccttgcgtca tcggcggcgc cgcctattcg
     5641 gccgggctgc agtatatcgc gcactaggaa cgcgcgcttt tgccgtcatt ccggggcgac
     5701 gcacggcggc gatcccggaa tccatatccg ccgaatccgg gaccatggat tccgcgcgcg
     5761 ctcgcttcgc tcggccccgg aatgacggcg gcggtcactt cgccaacgcg cgcaactgcg
     5821 cctcgaccgt ggctagcgcg ttctgcggct cgacccaggc aaactccgga agctggttgc
     5881 ggaaccaggt cgcctgccgc ttggtgtatt ggcgcgtgtc gcgcttcgcc tctaccgctg
     5941 cctgcgtcag tgtcatttcc cccttgaggt ggcgg
//
LOCUS       DATMQB010000406         7295 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4206849, whole genome shotgun sequence.
ACCESSION   DATMQB010000406 DATMQB010000000
VERSION     DATMQB010000406.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7295)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7295)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7295
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4206849"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1485
                     /locus_tag="VNY79_11585"
     CDS             <1..1485
                     /locus_tag="VNY79_11585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxyl transferase domain-containing protein"
                     /protein_id="HWX73135.1"
                     /translation="RFRARGQLLPRERVALLIDPGAPWLELSTLAGLRMHDDDGAEGI
                     QGGGGISGIGYVSDIRCIVSANDSAIKGGTSTPMGVKKHLRIQQIALENKLPFVRLVE
                     SGGANLLYQAEMFVEGGRGFANQARMSAAGIPQVTVVHGSSTAGGAYLPGLSDYVILV
                     RGRAKVFLAGPPLLRAATGEIATDEELGGAEMHATVSGLGEYLAEDDADGIRIAREVM
                     AKLPWNEQLPPRPQKSFKEPRYPAEELDGVVPSDYRKPYDVREVIARIVDESDFLDFK
                     ALYGPHTVCGHAEIEGHAIGLIGNNGPIDADGAAKAAQFIQLCCQANMPIVYVQNTTG
                     YMVGREAERAGIIKHGSKMIQAVANATVPQLTIHVGASFGAGNYGMCGRAYDPRFIFA
                     WPSNRIAVMGGEQAAKVMAIVTEEKLKREGKPVDKARIEVMEKAIVTRMEGESTALYA
                     TARLWDDGLIDPRDTRRVLGFCLSICREAEIRPLKPNTFGVARM"
     gene            1501..2694
                     /locus_tag="VNY79_11590"
     CDS             1501..2694
                     /locus_tag="VNY79_11590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015689255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX73136.1"
                     /translation="MAFTPEHDELRRSLQKFIAAEINPHVDQWEEDEIFPAHEVFKKM
                     GDLGFLGLTKPVAYGGQELDYSYAMVMAEELGNITCGSVPMAIGVQTDMATPALARFG
                     SDEVKREFLAPSISGDFVACLGVSEVGAGSDVASIKTTARKDGGEGGDYVINGGKMWT
                     TNGTQADWMCLLANTSDGPVHRNKSLICLPMKTKGVQIARKLDKLGMRSSDTAQIFFD
                     DVRVPQRYLIGEEGKGFIYQMLQFQEERLWSAAACLKSSERLIEQTIDYTRNRKAFGK
                     SILDNQVVHFRLAELSTEIELLRSLVYRACELYVAGTDVTRLASMAKLKAGRMRREVS
                     DACLQYFGGMGFMNETPVSRAFRDGRLTSIGGGADEVMLTIICKLMGTLPGTSNAPEQ
                     KAANA"
     gene            2687..3517
                     /locus_tag="VNY79_11595"
     CDS             2687..3517
                     /locus_tag="VNY79_11595"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HWX73137.1"
                     /translation="MPDLPRTSHIKLERRGPVLHLWLDRPEVRNALSAQMAREILATF
                     AAIADDRSVRVVVLRGAGGTFCAGADLKNLAVAGEPTAAAAAGAADELKESNRRFGTM
                     METVNAAPQAVIAAVEGYAMGGGFGLACVADITIATVDARFAMTEVTIGVVPAAISPF
                     VVKRIGLTAARRFGVSGARLTGAEACAIGVAHLVVPDAAALDAAVRDASNQILKCAPV
                     AVAATKRLMLRAAGPTPLSELLDDAADCFAAAVRSDEGREGTKSFVEKRKPSWAVQVE
                     "
     gene            complement(3600..4262)
                     /locus_tag="VNY79_11600"
     CDS             complement(3600..4262)
                     /locus_tag="VNY79_11600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73138.1"
                     /translation="MDTLEALSRIDPMVFPNWEVMDFPAIESLPLATARPRIAAIIDN
                     NVSRDDFGQPEPYGGYSAGAYTSHSFSPRGMNLRIRAGGKNAGETDLEAGEYDMFPDP
                     AVVTYPVFKAALLAINAIWPSAWACAYAFRMDYDKVPLFPGAALFPYSRFHIPWLAYL
                     SAPLAAGIELPPEIKSERSPDNGLLMIAADGRLEPTDPEHLRRARIVADIMIAHTGYR
                     SS"
     gene            complement(4339..5640)
                     /locus_tag="VNY79_11605"
     CDS             complement(4339..5640)
                     /locus_tag="VNY79_11605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73139.1"
                     /translation="MPDRQLGDAARVPGSIVPISTVLHLTSEGLVLGAGTLLVAADVA
                     RGLSSRRGQEARVLALLSAAYNRAVPPSVLGNIERAAKSWREGDDSLAYIHLAHAGLP
                     ELQEPRNAARRLFLADELMKAGGKPRTIFEILDLDAAFIDALEKRYNPAEPRLPAGSG
                     RISGEWTRLLSWLGNLTAAQAAELDVFAARFSAWAAVFGLLFVPSINNLGVEGEVPGL
                     PGLRYGWNRDETLLHFTYDSPDGRRRAFTAQLEDDLFRDPHGRVVGRVLPGGSIAIDR
                     AAVSPDLVDENEPRLCPEPGPDKAGGSEMGRKYEDYVKKFVNPEPRTPSGYGVQLANP
                     AENGALVFYDDCQRSTGMMVEAKGGYAGVLKFPEGRKSITKDWSNQSGRQVAARGWRR
                     LCWYFAEPATAAFAEDLFRTTDQGRETIDIKVLPWPEKGNE"
     gene            5847..>7295
                     /locus_tag="VNY79_11610"
     CDS             5847..>7295
                     /locus_tag="VNY79_11610"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HWX73140.1"
                     /translation="MIAFTKILIANRGEIACRITRTAKALGYRTVAVFSDADAGALHV
                     RAADEAVRIGPPPAQESYLNIEALLAAAKLAGADAVHPGYGFLSENAAFAEACTKAGL
                     IFIGPPAAAIDAMGNKARAKALMEAAGVPVVPGYRGADQSDETLIVEGRRIGFPLMVK
                     AAAGGGGRGMRLVTAAEDLPQALARSRSEAASAFGSDELILEQAIAGARHVEIQVFAD
                     RHGNVIHLGERDCSIQRRHQKVIEETPSPAVSTELREQMGEAAVAAARDIGYVGAGTV
                     EFLLDQSQKFYFLEMNTRLQVEHPVTEAVTGLDLVAWQLRIAAGEKLPLTQQEVRFDG
                     HAFEARLYAEDPLQNFLPQSGVLVDWRPASGEGVRIDHGLARGQNVSPFYDPMLAKVI
                     AHGATREEARRRLIAALEDTVALGLTTNRSFLIDVLRQPAFAAGEATTAFIDRHFPAG
                     SDAMRRAAPDARLLGLAAVLMFEARARATEVSS"
BASE COUNT         1311 a         2398 c         2325 g         1261 t
ORIGIN      
        1 cggtttcgcg cccgcggcca gcttctgccg cgcgagcgtg tcgcgctgct gatcgatccg
       61 ggtgcgccgt ggctcgaact gtcgacgctc gccggcttgc gcatgcacga cgatgacggc
      121 gccgagggca tccagggcgg cggcggcatc tccggcatcg gttacgtgtc ggacatccgc
      181 tgcatcgttt ccgccaatga cagcgccatc aagggcggca cttcgacgcc catgggcgtg
      241 aagaagcacc tgcgcattca gcagatcgca ctcgaaaaca agctgccgtt cgtgcgcctc
      301 gtcgaatccg gcggcgccaa tctcctttat caggcggaga tgttcgtgga aggcgggcgc
      361 ggcttcgcca accaggcgcg catgtcggcc gccggcattc cgcaggtcac cgtggtgcat
      421 gggtcctcga ccgcgggcgg cgcgtatctt cccggcctct ccgactacgt gatcctggtg
      481 cgcggtcgcg ccaaggtctt tctcgccggc ccgccgctct tgcgcgctgc gaccggcgag
      541 atcgctaccg acgaggaact cggcggcgcc gaaatgcacg cgaccgtatc ggggctaggc
      601 gaatacctgg ccgaggacga tgccgacggc atccgcatcg cgcgcgaagt catggccaag
      661 cttccgtgga acgagcagct cccgccgcgc ccgcaaaagt ccttcaagga gccgcgctat
      721 ccggccgagg agctagacgg cgtcgtgccg agcgactacc gcaagcctta cgacgtgcgc
      781 gaggtcatcg cccgcatcgt cgacgaatcc gatttcctcg atttcaaggc gctctacggt
      841 ccgcacacgg tatgcggcca cgccgagatc gaagggcacg ccatcggcct catcggcaac
      901 aacgggccga tcgatgccga cggcgcggcc aaggcggcgc agttcatcca actctgctgc
      961 caggccaaca tgccgatcgt ctacgtgcag aacacgaccg gctacatggt cggccgcgag
     1021 gccgagcgcg ccggcatcat caagcacggc tcgaagatga tccaggcggt cgccaacgcc
     1081 acggtgccgc agctcaccat tcacgtcggc gcctcgttcg gcgccggcaa ttacggcatg
     1141 tgcgggcgcg cctacgatcc gcgcttcatc ttcgcctggc cgagcaaccg catcgcggtc
     1201 atgggcggcg agcaggcggc gaaggtcatg gcgatcgtca ccgaggagaa gctcaagcgc
     1261 gaaggcaagc cggtcgacaa ggccaggatc gaggtgatgg aaaaggctat tgtcacgcgc
     1321 atggagggag aatccactgc gctttacgcc acggcccggc tgtgggacga cggcttgatc
     1381 gatccgcgcg acacgcgcag ggtcttgggc ttctgcctct ccatctgccg cgaggccgaa
     1441 attcgcccgc tcaagcccaa cactttcggc gtcgcgcgca tgtaacgagg agcaacgacg
     1501 atggcattca cgcccgagca tgacgagctg cgccgcagcc tgcagaaatt catcgccgcg
     1561 gagatcaacc cgcacgtgga ccagtgggag gaggacgaga tcttccccgc ccacgaggta
     1621 ttcaagaaga tgggcgacct cggtttcctc ggcctcacca agccggtggc ctatggcggg
     1681 caagagctcg actattccta cgccatggtg atggccgaag aactcggcaa catcacctgc
     1741 ggcagcgtgc cgatggcgat cggcgtgcag accgacatgg cgacaccggc gctcgcccgc
     1801 ttcggctccg acgaggtcaa gcgcgaattt ctggcgccgt cgatttccgg cgacttcgtc
     1861 gcctgcctcg gcgtctccga agtcggcgcc ggctccgacg tcgcctcgat caagaccacg
     1921 gcgcggaagg acggtggcga gggcggcgac tacgtcatca acggcggcaa gatgtggacc
     1981 accaacggca cccaggccga ctggatgtgc ctcctcgcca acacgtccga cggtccggtg
     2041 cacaggaaca aatcgctgat ctgcctgccg atgaaaacca agggcgtgca gatcgcccgc
     2101 aagctcgaca agctcggcat gcgctcctcc gataccgcgc agatcttttt cgacgacgtg
     2161 cgagtgccgc agcgctatct gatcggggaa gagggcaagg gctttatcta tcagatgctg
     2221 cagttccagg aggagcgcct gtggagtgcg gcggcatgcc tgaaatcgtc tgagcggctg
     2281 atcgagcaga ccatcgacta cacccgcaac cgcaaggcct tcggcaaatc gatcctcgac
     2341 aatcaggtgg tgcatttccg gctggcggag ctgtcgaccg agatcgagct gttgcgctcg
     2401 ctcgtctacc gcgcttgcga gctttatgtc gccggcaccg acgtgacccg cctcgcctcc
     2461 atggccaagc tcaaggccgg gcgcatgcgc cgcgaggtga gcgacgcctg cctgcaatat
     2521 ttcggcggca tgggcttcat gaacgagacg ccggtgagcc gagccttccg cgacgggcgg
     2581 ctcacgtcga tcggcggcgg cgccgacgag gtcatgctga ccatcatctg caagctcatg
     2641 ggaacgctac caggcacctc gaacgctccg gagcagaagg cagccaatgc ctgacctgcc
     2701 gcggacgtcg cacatcaagc tcgaacggcg cggcccggtc ctgcacctct ggctcgaccg
     2761 ccccgaggtc cgcaatgcgc tcagcgccca gatggcgcgc gagattctgg cgaccttcgc
     2821 ggctatcgct gacgaccgtt ccgtgcgcgt ggtggtgctg cgcggggccg gcggcacgtt
     2881 ctgcgccggc gccgatctga agaacctcgc ggtcgcgggc gaaccgaccg cggcggctgc
     2941 cgcgggtgca gccgacgagc tcaaggagag taaccggcgc ttcggcacga tgatggagac
     3001 ggtgaacgcc gctccgcagg cagtcatcgc cgccgtcgaa ggctacgcca tgggcggcgg
     3061 cttcggcctc gcctgcgttg ccgacatcac tatcgccacc gtcgacgccc gctttgccat
     3121 gaccgaagtg acgatcggcg tcgtaccggc ggcaatctcg ccgttcgtgg tcaagcgcat
     3181 tggccttacc gccgcgcggc gcttcggcgt ctccggcgcg cgcctcaccg gcgccgaggc
     3241 gtgcgccatc ggcgtcgcgc atctcgtggt gccggatgcc gccgcgctcg acgccgccgt
     3301 gcgcgacgcg agcaatcaga tcctcaaatg cgccccggtc gcagtcgccg ccaccaagcg
     3361 gctgatgctg cgcgccgccg ggcccacccc gctgtcggag ctcctcgacg acgcggccga
     3421 ctgcttcgcc gccgctgttc gcagcgacga gggccgagaa ggcacgaagt cgttcgtcga
     3481 gaagcgcaag ccgtcctggg cggtgcaggt ggagtgattg aagtggcacg ctcactagtt
     3541 cttcgttcat tcccgcgcta acgggaatct ggagaggcac taacttctgg gcggcaagcc
     3601 tacgaagagc gatagccggt gtgagcgatc atgatatctg cgacaatgcg cgcgcgccgc
     3661 aggtgctccg ggtcggtggg ttcaagccga ccatccgcgg cgatcatcag gagcccattg
     3721 tccggcgatc gctcggactt tatttccggc gggagttcga tgccggcggc aagcggtgct
     3781 gaaagatagg caagccacgg gatgtggaag cgcgaatagg gaaacaaagc ggcgccgggg
     3841 aacagtggca ccttgtcgta gtccatcctg aaggcatagg cgcaggccca agcggaaggc
     3901 caaatcgcgt tgatcgcgag cagcgcggcc ttgaagactg gatacgtcac caccgctgga
     3961 tcggggaaca tatcgtactc tccagcctcc agatcagtct cgcccgcgtt ctttccgccg
     4021 gcgcgtatcc tcagattcat cccacgcggg ctgaagctat ggctggtata ggcaccagcg
     4081 ctgtaacccc catatggctc cggttggccg aaatcgtcgc gactgacatt gttgtcgatt
     4141 atggcagcga tgcgcggtcg cgctgtcgcg agtggcagtg actcgatggc aggaaaatcc
     4201 atcacctccc aattggggaa aaccatcgga tcgatgcggc tcaaagcctc gagtgtgtcc
     4261 acgaacttcg cgccaatgga ggccgggctt tccggatggg ctggaaggtt ggagcgaatg
     4321 gaatacctga agtttagact actcattgcc tttttccggc cagggtagga ccttgatgtc
     4381 gatcgtctcg cgaccctgat ctgttgtcct gaaaagatcc tcggcaaaag ccgccgtcgc
     4441 cggctcggcg aagtaccagc acagccggcg ccagccgcgc gcagcgacct gccgcccgga
     4501 ttgattcgac cagtctttgg tgatcgactt tctaccctcc gggaacttca aaacccccgc
     4561 atatccccct ttggcttcga ccatcatgcc ggtcgaacgc tggcaatcgt cgtagaaaac
     4621 caaagcgccg ttttccgcgg ggttggcgag ttgcacgccg taaccgcttg gggtcctggg
     4681 ctccggattg acgaacttct tcacatagtc ctcgtatttt cggcccattt cgctcccgcc
     4741 agccttgtct ggtcccggtt cgggacagag tctcggctcg ttctcatcca ccaaatctgg
     4801 cgagaccgct gcccggtcga tggcgatgct ccctccggga agcacgcgcc caacgacccg
     4861 gccatgcgga tcgcgaaaca gatcgtcctc caattgcgca gtgaaggcgc gccgcctccc
     4921 gtcagggctg tcgtacgtaa agtgaagcaa tgtctcgtcg cgattccaac cgtatcgcag
     4981 cccgggcagg ccgggcactt cgccttcaac accaaggttg tttatggatg ggacaaacaa
     5041 cagcccgaat actgccgccc acgcgctgaa gcgcgccgcg aacacatcga gttccgcagc
     5101 ctgcgcggct gtgagattgc caagccaaga gagaagccgc gtccactcgc cgcttatcct
     5161 gccgctaccg gccggcaagc gaggctctgc tgggttgtag cgcttctcaa gggcgtcgat
     5221 gaacgcggcg tcgagatcga gaatttcaaa aatcgtccgc ggctttccgc ccgccttcat
     5281 cagttcgtcg gcaaggaaga gccgccgtgc cgcgttgcgc ggctcttgca gttcgggcag
     5341 acccgcatgc gcaagatgga tgtaagccag cgaatcgtcg ccttccctcc aactcttagc
     5401 ggcgcgttcg atattgccca gcactgaggg cggcacggct cgattgtaag ccgcggacaa
     5461 cagcgccagg acgcgtgctt cctgacctct ccggctgctc agtcctcgcg ccacatcggc
     5521 cgcgactagc aatgtgccag ccccgagcac caggccctct gaagtaaggt gcagcactgt
     5581 gctgataggg acgatgctcc ccggcacacg ggccgcgtca cccagctggc ggtccggcaa
     5641 gcggtttcct cgttatgttg tctctgaaac tgtgacggtc accatatcag ggataggaaa
     5701 atagtcaaga acaaaggagg aaatgaccga ttgtcatatt ctccccagtc taccccgtct
     5761 atcgtattga tattattgtc aattcctctt gcgggcgtgc ggtcggagct gctatggctt
     5821 tgtccgctgg cacagcggcc gctacaatga ttgctttcac gaaaatcctc atcgccaacc
     5881 gcggcgagat cgcttgccgt atcacgcgca ccgcgaaggc gctcggctac cgcacggttg
     5941 cagttttcag cgatgccgat gccggcgccc tgcatgtgcg cgcggccgac gaagccgtgc
     6001 gcatcggccc gccgccggcg caggagagct acctcaacat cgaggcgttg ctggcggccg
     6061 caaagctcgc gggcgccgat gcggtacatc ctggctacgg attcctgtcc gagaatgccg
     6121 cgttcgccga agcctgcacc aaggcgggcc tcatcttcat cggcccgccg gcggcagcga
     6181 tcgacgccat gggcaacaag gcgcgcgcca aggccttgat ggaggcggcc ggcgttccgg
     6241 tcgtgcccgg ctatcgcggc gccgaccagt ccgacgaaac gttgatcgtg gaaggccgcc
     6301 gcatcggctt tccgttgatg gtcaaggccg cggcgggcgg cggcggccgc ggcatgcggc
     6361 tcgtgactgc tgccgaggac ctcccgcagg cgctggcgcg cagccgttcc gaagcggcaa
     6421 gcgccttcgg ctcggacgaa ctgatcctgg agcaggcgat cgccggcgcc cgccacgtcg
     6481 agattcaggt ttttgccgat cggcacggca acgtcatcca tctcggcgag cgcgactgct
     6541 cgatccagcg ccggcaccag aaagtcatcg aggagacccc ctccccggct gtctcgaccg
     6601 aactgcgcga gcagatggga gaagccgcgg tcgcggcggc acgcgacatc ggctacgtcg
     6661 gcgccggcac cgtcgagttt ctgctcgatc agtcgcaaaa attctacttt ctggaaatga
     6721 atacgcggct gcaggtcgag catcctgtga ccgaggcagt gaccggtctg gatttggttg
     6781 cctggcagtt gcgcatcgcc gccggcgaaa agttgccgct gacgcagcag gaggttcgct
     6841 tcgacggcca cgccttcgaa gcgcgcctct acgccgaaga cccgctccag aattttctgc
     6901 cgcagagcgg cgttctcgtt gattggcgtc cggcctcggg cgagggcgtg cgcatcgacc
     6961 atggacttgc gcggggccag aatgtgagcc cgttctacga tccgatgctc gcgaaggtaa
     7021 tcgcccatgg ggcgacgcgc gaggaggcgc gacggcggct gatcgcggcg cttgaggata
     7081 ccgttgcgct cggactgact accaaccgca gtttcctgat cgacgttctc cgccaaccgg
     7141 cgttcgccgc cggcgaggcg acgaccgcgt tcatcgaccg gcattttcct gcgggaagcg
     7201 acgccatgcg ccgcgcggcg ccggacgcac gcctgctcgg gctcgcggcg gtactgatgt
     7261 tcgaggcgcg cgcacgcgcg acggaggttt cgagc
//
LOCUS       DATMQB010000407         4449 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3611644, whole genome shotgun sequence.
ACCESSION   DATMQB010000407 DATMQB010000000
VERSION     DATMQB010000407.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4449)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4449)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4449
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3611644"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            77..640
                     /locus_tag="VNY79_11615"
     CDS             77..640
                     /locus_tag="VNY79_11615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016839704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HWX73141.1"
                     /translation="MGTSTLIVLAVIVVAALWVISIYNGLVSMRQRVNQAFADVDVQL
                     RQRHDLVPNLVETVKGYAAHERGTLDEVVKARNAAVAAQGPEQKAAAETMLSGALRQL
                     FALSEAYPDLKANANFQALQAELSDIENKIAAARRFFNNAVQEYNSGTQRFPAALFAS
                     SLGFAPKEFFDLGEERKTVGEAPQVKF"
     gene            826..2004
                     /locus_tag="VNY79_11620"
     CDS             826..2004
                     /locus_tag="VNY79_11620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M48 family metallopeptidase"
                     /protein_id="HWX73142.1"
                     /translation="MAAYGLYSHIQSNRRRSAALLAGLFFLVYLLVYAGALIAEALSV
                     NADLETLMRRALSDLISAAPLATIGTVLWIVIAYFFHQNMIDAMTGGQEVTRREEPRL
                     YNILENLCISRGIPMPKLKVMESDALNAFATGMNQRQYSITVTSGLLRLLDDAEIESV
                     LGHELTHVRNGDVRMMVVAVIIAGVVSFFAELFFRLWFYGGFRGSRSSDERRGGGASF
                     AILIAVALIVLAYLLSFIIRLALSRSREFLADAGSVELTKKPDAMISALRKIEGRGEL
                     PGATSAVMEMCIDNPRQGFGELFDTHPTVESRVAALVKFAGGHDPGPLALSPAGESGE
                     EVPSELPAPGGPWESAPARGPWNAAAENGAEDGASGTPPPADIDTSSVPGPWGPHRNR
                     "
     gene            2329..3105
                     /locus_tag="VNY79_11625"
     CDS             2329..3105
                     /locus_tag="VNY79_11625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73143.1"
                     /translation="MAKPTVVVVGADKGGVGKTTVARTVLDYFTAHHVPARAFDSEAP
                     KGTLKRFHPDVTDIVDVTSVSDQMRIFDTLTEASVTVIDVRAGMLSPTLRSLRDIGFL
                     DSVKKGQITFVVLHILGSSIASLNEIEDTASFIGDANYFLVKNFINNTSFFEWDQATH
                     SSYFKKKDAVAITIPKLNEMAFEQVELASVPFLTFVANKGPKGETANYSFVLRGYVRH
                     WLGNVWGEYDRIKLNDIVATAAPQQPQQASGARVQVVGRS"
     gene            3178..3915
                     /locus_tag="VNY79_11630"
     CDS             3178..3915
                     /locus_tag="VNY79_11630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73144.1"
                     /translation="MTQPHHPLYIVASPRPRVGKTLLARLLIEFFYASDRALIGYDLN
                     AREPALAGRFPHLVWPVDITETLGQMELFDRLIADNSRTQIVDLGYAPFEQFFGVLNE
                     IGFVPEARRRLIEPIVLFVTDPAPATVSIYAELRHRLPGATFVPVHNELVSVMFEKED
                     FPATRSECSLIYIPRLSPIVRGVIDRPSFSFATYMTSQPGGPTEVHQWIAQIFTAFRD
                     LELRLLMGRLTSSFGGAAAAPQFRGVR"
     gene            complement(3975..>4449)
                     /locus_tag="VNY79_11635"
     CDS             complement(3975..>4449)
                     /locus_tag="VNY79_11635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73145.1"
                     /translation="VQPGVLQEKSGPSIATEFGALLPAIGGSGVGASWTGIVSQRWDW
                     GTVHFNLAANLTPDQHAEVFVDTIIEGPHKWEVRPVAEFYFDNVFNGEQTYSALVGAI
                     WQVNDKLSFDVAVRYALVDGRPVSEFRAGLTFGFPLNFGKPSSAQMPNPALIGRR"
BASE COUNT          759 a         1465 c         1440 g          785 t
ORIGIN      
        1 cgccgcggtt atgtcccgcg gctaagatgc ggccgcgaaa ccgaattgat cttgcggcac
       61 gccgaaggat tttccgatgg gcacctcgac actgatcgtt ctcgccgtga tcgtggttgc
      121 ggccttgtgg gtgatctcga tctacaacgg cctcgtctcc atgcgtcaac gcgtgaacca
      181 ggcctttgcc gatgtggacg tgcagttgcg gcagcggcat gacctcgttc ccaacctggt
      241 cgagacggtg aagggctatg ccgcgcacga gcgcggcacg ctcgacgagg tggtaaaggc
      301 gcgcaacgcc gcggtcgccg cgcaggggcc ggagcagaag gcggcggccg agaccatgct
      361 ttcgggcgcg ctgcgccagc tcttcgccct ctccgaggcc tatcccgacc tcaaggccaa
      421 cgcgaatttc caggcgctgc aggcggaact gagcgacatc gaaaacaaga tcgcggcggc
      481 gcggcgcttc ttcaacaacg cggtgcagga atacaatagc ggcacgcagc gattccccgc
      541 cgccctgttc gcctcctcgc tcggttttgc gccgaaggag ttcttcgatc tcggcgagga
      601 gcgcaagacc gtgggcgagg cgccgcaggt gaagttctag cgccgtcgcg ccggctatga
      661 cgcacaaacg ctcggcagac tccgcgtgtc cttctccccc ctgtggggag gggttagggg
      721 tcggggtcgt tgagactttt gtcgcccgcg aggatgccgc ctcaccttgc tgcccccctt
      781 cccgaccgtc ctcgacaagc tcgcaggaag caggctgagt gcacgatggc cgcatacggt
      841 ctctacagcc acatccagtc gaaccggcgc cgttccgccg cgctcctggc cggcctgttc
      901 ttcctcgtct acctgctcgt ctatgccggc gcgttgatcg ccgaggcgct gtcggtcaat
      961 gccgatctcg agacgttgat gcggcgcgcg ctgagcgatc tcatcagcgc ggcgccgctg
     1021 gccacgatcg gcacggtact ctggatcgtc atcgcctatt tcttccacca gaacatgatc
     1081 gacgcgatga ccggcgggca ggaggtcacg cgccgggagg agccgcggct ctacaatatt
     1141 ctggaaaatc tctgcatctc gcgcggcatc cccatgccca agctcaaggt gatggagagc
     1201 gacgcgctca atgccttcgc gaccggcatg aatcagcggc aatattcgat cacggtcacg
     1261 tccgggctgt tgcgtctgct cgacgacgcc gagatcgagt ccgtgctcgg ccacgagctc
     1321 acccacgttc gcaacggcga tgtgcgcatg atggtcgtcg ccgtcatcat cgccggcgtc
     1381 gtttcctttt tcgcggaact gttcttccgg ctctggttct acggcgggtt ccgcggttcg
     1441 cgatcctccg acgagcgccg cggtggcggc gccagcttcg cgatcctgat cgcggtggcg
     1501 cttatcgtgc tcgcctacct gctctccttc attatccgcc tcgcgctatc acgctcgcgc
     1561 gagttcctcg ccgatgccgg atcggtcgag ctgaccaaga agccggacgc gatgatctcg
     1621 gcgctgcgca agatcgaagg ccgcggcgag ctgccgggcg cgacctccgc ggtgatggaa
     1681 atgtgcatcg acaacccgcg ccaaggcttc ggcgagctgt tcgacacgca tccgacggtc
     1741 gagagccggg tggcggcgct ggtcaagttt gccggcgggc acgatcccgg cccgctcgcg
     1801 ttgtcgccgg ctggcgagag cggcgaggag gtcccatccg agctgcccgc gccgggcggc
     1861 ccgtgggaat cagcgcccgc gcgcggaccc tggaatgcgg ccgccgagaa cggcgccgaa
     1921 gacggcgcca gcggcacgcc gccgccggcg gacatcgaca cttcttcggt accgggaccg
     1981 tgggggccgc accgcaaccg ctagcgcgcc aagcgcgaaa cccgtgccag gcgatacgtt
     2041 cggccgcagc ggaacctcgt tgcggggcag cgccatgcct cggaaaatct cccgctcggg
     2101 gtgcgatcag cgttccgcct cacgtcgcaa tggcgccaca atgcgctcgc ggacgctcat
     2161 aaataaaagc gcgtgctacg tcgggcttcc aaacagcacg caggatgtgt agaaccgaat
     2221 cgggggaaag agggcgcgac gccctcgatt ttgctgctgt cttctgccgg aattgcggag
     2281 cccgacgggt tgagtatggg gcggcgcggc gtcagcgagg ggtcgatcat ggcgaagcca
     2341 acagtggtcg tggtgggtgc ggacaagggc ggcgtcggca agacgacggt cgcgcgcacc
     2401 gtgctcgact atttcacggc gcatcacgtg ccggcacgcg ccttcgattc ggaggcaccc
     2461 aaaggcacgc tgaagcgctt tcatcccgac gtcaccgata tcgtcgacgt gacttcggtc
     2521 tccgaccaga tgcgcatctt cgacacgctg acagaagcga gcgtgaccgt gatcgacgtg
     2581 cgcgccggga tgctgtcgcc gacgctgcgc tcgctgcgcg acatcggctt cctcgactcg
     2641 gtgaagaagg ggcagatcac cttcgtggtc ctccacatcc tcggctcgtc gatcgcctcg
     2701 ctcaacgaga tcgaggatac cgcctcgttc atcggcgacg ccaactattt cctggtgaag
     2761 aacttcatca acaacaccag cttcttcgaa tgggaccagg cgacgcactc atcctatttc
     2821 aagaagaagg atgcggtcgc gatcactatc cccaagctca acgagatggc gttcgaacag
     2881 gtggagctcg cctcggttcc gttcctcacc ttcgtcgcca acaaaggccc gaagggcgag
     2941 acggcgaact attcctttgt gctgcgcggt tacgtccggc actggctcgg caacgtctgg
     3001 ggcgagtacg accgcatcaa gctcaacgac atcgtcgcca ccgcggcgcc gcaacagccg
     3061 cagcaggcga gcggggcgcg cgtgcaggtc gtcggccggt cgtgatcgcg gcgcgcttcg
     3121 ggcgggcgcc cggcgcggag tgggttgaga tcggcggcag ggggagcgat cgccgccatg
     3181 acgcagccgc atcatccact ttacatcgtc gcctcgccgc ggccgcgcgt gggcaagacg
     3241 ctgctggcgc gactgttgat cgaatttttc tacgccagcg accgcgcgct catcggctac
     3301 gacctcaatg cgcgcgagcc ggcgctcgcg gggcgcttcc cgcacctggt ctggccggtc
     3361 gacataactg aaacgctcgg ccagatggag ctgttcgacc gcctgatcgc ggacaattcc
     3421 cgcacccaga tcgtcgacct cggctacgcg ccgttcgagc agttcttcgg cgtcctgaat
     3481 gaaatcggct tcgtgccgga ggcgcggcgg cgtttgatcg agccgatcgt gctgttcgtg
     3541 accgacccgg cgccggccac cgtcagcatc tatgcggagc tgcggcaccg gctgccggga
     3601 gcgacgttcg tcccggtgca caacgagctg gtttcggtca tgttcgagaa agaggatttc
     3661 ccggcgacgc gcagcgaatg cagcttgatc tacattccgc gtctgtcgcc gatcgtgcgc
     3721 ggcgtgatcg atcggccgag cttctcgttc gccacctaca tgacctcaca gccgggagga
     3781 ccgaccgagg tccaccaatg gatcgcgcaa atcttcacgg cgttccgtga cctggagctg
     3841 cggctgctca tggggaggct cacctcctcg ttcggcggcg cggcggcggc gccgcagttc
     3901 cgcggcgtgc gctgaacacg atccgcgaac ggagccgcct ctgcacaagc gcgtgtctga
     3961 gccgcgggac agcctcaacg ccggccgatc agcgccgggt tcggcatttg cgcggaggac
     4021 ggcttgccga aattgagcgg gaaaccgaac gtgagccccg cgcgaaactc gctaaccggc
     4081 cggccatcga cgagggcata acgtacggca acgtcaaaag aaagcttgtc gttcacttgc
     4141 cagatggcgc cgaccaaggc ggagtacgtc tgctccccgt tgaaaacgtt gtcgaaatag
     4201 aactccgcga ccggccggac ctcccatttg tgcggcccct cgataatcgt gtcgacaaat
     4261 acctcggcat gctggtctgg ggtgaggttg gctgcgaggt tgaagtgcac tgtcccccaa
     4321 tcccaccgtt gcgagacgat tccggtccaa ctggcgccga caccagagcc gccgattgcg
     4381 ggtagcagcg cgccgaactc ggtggcgatg ctcggtccgg acttctcctg gaggacgccg
     4441 ggctgaacg
//
LOCUS       DATMQB010000408         5336 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1447693, whole genome shotgun sequence.
ACCESSION   DATMQB010000408 DATMQB010000000
VERSION     DATMQB010000408.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5336)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5336)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5336
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1447693"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(6..1616)
                     /locus_tag="VNY79_11640"
     CDS             complement(6..1616)
                     /locus_tag="VNY79_11640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxyphenylacetate 3-hydroxylase N-terminal
                     domain-containing protein"
                     /protein_id="HWX73146.1"
                     /translation="MSTTVKGDKEAVGKSGAKPGAETRITRPQNGSEYLDSLRDDRTI
                     FIYGERVKDVTTHPAFRNTARMVARLYDALHDPKHADKIIVPTDTGNGGKTHAFFKAP
                     KSLADLLAGRSAIAEWAKITYGWLGRSPDYKASFLATLGANAEFYDPYQENARRWYKL
                     SQERVPFVNHAIIHPPVDRDRPPNEVGDVCCHVEKETDAGIIVSGAKVVATGSVLTNY
                     TFVAHHGLIPVQDKKFAVVFMVPTNHPGVKFVCRTSYEMTSTVMGSPFDYPLSSRIDE
                     NDAVFILDKVLVPWENVFVYGDLEKANNFFPRTGFLPRFVVHGCTRLAVKLDFIAGLL
                     LKAVEASGTKDYRGVQANVGEVIAWRNLFWALSDAMVRDPKPWIGDYVLPNMDPGNAY
                     QIIATMAYTKVKYIIEQTVASGLIYLNSHARDFKNAEIRPYLDRYMRGSNGYKAEERV
                     KLMKLLWDCLATEFGGRHELYEINYGGSTEEIRRYCLFGAQASGNADRFKGFAEDCMA
                     EYDLDGWKVPDLTDPGELSYHVMRGAGR"
     gene            complement(1758..2537)
                     /locus_tag="VNY79_11645"
     CDS             complement(1758..2537)
                     /locus_tag="VNY79_11645"
                     /inference="COORDINATES: protein motif:HMM:TIGR02431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IclR family transcriptional regulator C-terminal
                     domain-containing protein"
                     /protein_id="HWX73147.1"
                     /translation="MMRARDGGRDDKEFMATLAKGLAVLGTFDKARPAMTLSQAAQAT
                     GLSRATARRILRTLTELGYVLQNGRQFSLSSGILKLGFAYLATQNWIEQASPLMRQLG
                     EQFHESCSAAILQGSEIVYVARFPAGRIMSVTLAVGTRLPAFHTALGRIQLGFLDEAE
                     VWCRLKSARVEAYTPSTITDIQALFDRVREDHAQGFSIVDEELERGLRAIAVPIVDRD
                     GQTVAALNLSTHSTRTTRNEMRDRFLPSLRAVAEQISASVV"
     gene            2734..4059
                     /locus_tag="VNY79_11650"
     CDS             2734..4059
                     /locus_tag="VNY79_11650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018247088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX73148.1"
                     /translation="MVKTRDIVRVNRRAFMKASAATGAALAAGSVFAPAVHAAKSIKI
                     GYVSPQTGPLAAFAEADNFVISNFLEAVKAGVKVGSATYPVEVAVKDSQSNPNRAAEV
                     AKELIVGNKIDLMLVASTPETTNPVATQCEIEEVPCVSSVAPWQPYFIGRQGNPGDPK
                     SWKPFNYTYHFFWGLEDVIAVFTNMWGQLKTDKSVGGLFPNDGDGNAWGDKTVGFPPV
                     LDKLGYKLTDPGRYQNLTDDFSAQINAFKKANCDIITGVVLPPDFTTFWNQAQQQGLK
                     PKAASIGKAILFPVAVEALKGNGNNLSSEVWWSPNHPFKSSLTGMSAKALADAYQNAS
                     GKQWTQPIGFIHALFEVAVDVMKRSPDVGDNKAIVKAIAATNLNTVVGNIEWANQKLP
                     PFAQKNIAKTPLVGGQWRLRAGGNKYDIVITDNKTAPEIPVGGHMEPIA"
     gene            4318..5043
                     /locus_tag="VNY79_11655"
     CDS             4318..5043
                     /locus_tag="VNY79_11655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018448887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73149.1"
                     /translation="MGGVILRLDNLTRSFGSLKAVDGVSLDVAPGEALGIIGPNGAGK
                     STLFNLITGLIRPDGGAVWFDGRDITQAPPRARCIAGIGRSFQIPHPFENLTVFENLL
                     VAAVHGRRQREAQVTDACGEILERTGLIAFANRRAGTLNLLGRKRLELARALAGAPRL
                     LLLDEIAGGLTEAECAELVHLMRAINDAGITIVWVEHVVHALLAVVSRLAVLNFGRKI
                     VEGEPRTVMASAEVREIYMGIAA"
     gene            5040..>5336
                     /locus_tag="VNY79_11660"
     CDS             5040..>5336
                     /locus_tag="VNY79_11660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014129309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HWX73150.1"
                     /translation="MTQPGGTAVLETSELTAFYGDFQALFGITFALGEGETVAIIGAN
                     GAGKSTFLKAIAGLLPRPAAAVRLNGRDIGALPAFEIVKLGVALVPEGRRLFPSL"
BASE COUNT          929 a         1703 c         1760 g          944 t
ORIGIN      
        1 tcggcctacc gtccggcgcc gcgcatgaca tgatagctga gttcgccggg atcggtgagg
       61 tccgggacct tccagccgtc gagatcatat tccgccatgc agtcctcggc gaagcccttg
      121 aagcggtcgg cgttgccgga cgcctgcgcg ccgaacaggc agtagcggcg gatttcctcg
      181 gtcgagccgc cataattgat ctcgtagagc tcgtggcggc cgccgaattc ggtcgccagg
      241 cagtcccaca aaagcttcat cagcttgacg cgctcctcgg ccttgtagcc gttggagccg
      301 cgcatgtagc ggtcgagata gggacggatc tcggcgttct tgaagtcgcg ggcatgggaa
      361 ttgaggtaga tgagtcccga ggcgacagtc tgctcgatga tgtatttgac cttggtgtag
      421 gccatggtgg cgatgatctg ataggcgttg ccggggtcca tgttcggcag cacgtagtcg
      481 ccgatccagg gttttggatc gcgcaccatc gcgtcggaca gcgcccagaa caggttgcgc
      541 caggcgatga cctcgccgac gttggcctgc acgccgcggt aatccttggt gcccgaggcc
      601 tcgaccgcct tgagcagcag gccggcgatg aagtcgagct tgaccgcaag ccgcgtgcag
      661 ccgtggacaa cgaagcgcgg caggaagccg gtgcgcggga agaagttgtt ggccttttcc
      721 aggtccccgt agacgaagac gttctcccag gggacgagca ccttgtcgag aatgaagacc
      781 gcgtcgttct catcgatccg gctcgacagc ggatagtcga acgggctgcc catcaccgtc
      841 gaggtcatct cgtaggaggt gcggcagacg aatttcaccc cgggatggtt ggtcggcacc
      901 atgaacacca cggcgaattt cttgtcctgc accgggatga ggccgtgatg ggcgacgaag
      961 gtgtagttgg tcagcaccga tccggtggcc accaccttgg cgccggagac gatgatgccg
     1021 gcgtcggtct ccttctcgac gtgacagcag acgtcgccga cctcgttcgg cgggcggtcg
     1081 cggtcgactg gcggatggat gatggcgtgg ttgacgaacg gcacgcgctc ctggctcaat
     1141 ttgtaccagc gtctcgcgtt ctcctgataa ggatcgtaga actcggcgtt ggctccgagc
     1201 gttgccagga acgacgcctt gtagtcgggt gagcggccga gccagccgta ggtgatcttc
     1261 gcccattcgg cgatggcgct gcgcccggcc aggagatcgg cgagcgactt cggcgccttg
     1321 aagaaggcat gcgtcttgcc gccgttgccg gtgtcggtcg gcactatgat cttgtcggca
     1381 tgcttggggt cgtgcagcgc atcgtacagg cgcgccacca tgcgggcggt gttgcggaag
     1441 gcgggatgcg tggtcacgtc cttcacgcgc tcgccgtaga tgaagatggt gcggtcgtcg
     1501 cgcagcgagt cgagatattc gctgccgttc tgcggcctgg tgatgcgggt ctcggcgccc
     1561 ggttttgctc ccgacttgcc aaccgcttcc ttgtcgccct tcacggttgt gctcatgacg
     1621 cgtgtccctc tccagctata tttgttcggc tatcgaactg ccgtccggta ttcgaccgtt
     1681 ggcgcaaacg atacccggcg gatgtgctgc aagcaaggcg cggatttcca gtcggccgca
     1741 gtcgctcacg gcagcgctca caccaccgaa gcggaaatct gctcggctac ggcgcgcagg
     1801 ctgggcagga agcggtcgcg catctcgttg cgcgtggttc gcgtcgaatg ggtgctgaga
     1861 ttgagcgcgg cgaccgtctg gccgtcacgg tcgacgatcg gcaccgcaat cgcgcgcagc
     1921 ccgcgttcaa gctcctcgtc gacgatggag aacccctggg cgtgatcctc gcgcacgcgg
     1981 tcgaacagcg cctggatgtc ggtgatcgtc gacggcgtgt aggcctcgac gcgcgccgat
     2041 ttcagccggc accagacttc cgcttcgtcg agaaagccaa gctgtatccg tcccagcgcg
     2101 gtgtgaaacg ccggcagccg tgttccgacc gccagcgtca ccgacatgat gcggcccgcg
     2161 ggaaagcgcg cgacgtagac gatctcgctg ccctgaagaa tcgccgcaga gcacgattca
     2221 tggaattgct cgccgagctg ccgcatcagc ggcgaagcct gctcgatcca gttctgcgtt
     2281 gcgagatagg caaagcccag cttgagaatg ccggacgaaa gcgagaactg ccgcccgttc
     2341 tgcagcacgt agccgagctc ggtgagcgtg cgcaggatcc gccttgcggt cgcgcgcgac
     2401 aggccggtcg cctgcgccgc ctgcgagagc gtcattgccg gccgcgcctt gtcgaacgtg
     2461 ccgaggacgg cgaggccctt ggcgagcgtc gccatgaact ccttgtcgtc cctgccgccg
     2521 tcgcgtgcgc gcatcatggc tcgcgccgcc gtcgcgccgg caattgacag aaactcggct
     2581 gtcggcaaca ctgtctcaca gtgcgaacct tcgttcgata atcgaactta accggcatcc
     2641 ttgcatggtg caagacggag attcgcttcc agggtgaaac gtcaaccggc acggcccgac
     2701 gcgggcgcag tgcgatcgga cagggaggac ggcatggtga agacgagaga catcgtgcgc
     2761 gtgaaccggc gcgccttcat gaaggcgtcg gccgcgacgg gtgcagcgct cgccgcaggt
     2821 tcggtgttcg ctcccgccgt gcacgccgcg aaaagcatca agatcggcta tgtgagtccg
     2881 cagaccgggc cgcttgccgc cttcgccgaa gcggacaatt tcgtcatctc gaattttctc
     2941 gaggcggtga aagccggcgt caaggtcggc agcgcgacct atccggtcga agtcgcggtg
     3001 aaggacagcc agtcgaatcc caaccgcgcc gccgaggtgg cgaaggagtt gatcgtcggc
     3061 aacaagatcg acctgatgct cgtcgcctcg acgccggaga cgaccaatcc ggtggcgacg
     3121 caatgcgaga tcgaggaagt gccctgcgtc tccagcgtcg cgccgtggca gccttacttc
     3181 atcggccggc agggaaatcc gggcgatccg aagtcctgga agccgttcaa ctacacctat
     3241 cacttcttct gggggctcga ggacgtgatc gccgtcttca ccaacatgtg ggggcagctc
     3301 aagaccgaca aatccgtcgg cggcctgttc cccaatgacg gcgacggcaa cgcctggggc
     3361 gacaagacgg tcggcttccc gccggtgctc gacaagctcg gctacaagct caccgatccc
     3421 ggccgctatc agaacctcac cgacgacttc agcgcgcaga tcaacgcgtt caagaaggcg
     3481 aactgcgaca tcatcaccgg cgtggtgctg ccgcccgact tcaccacttt ctggaatcag
     3541 gcgcagcagc aagggctcaa gccgaaggcg gcctcgatcg gcaaggccat tctgttcccg
     3601 gtggcggtcg aagcgctcaa aggcaacggc aacaatcttt cctccgaggt ctggtggtcg
     3661 cccaatcatc cgttcaagtc gtcactgacc ggcatgtcgg caaaggcgct cgccgacgcc
     3721 tatcagaacg cctcgggcaa gcagtggacg cagccgatcg gcttcatcca cgcgctgttc
     3781 gaggtcgccg tcgacgtgat gaagcgctcg cccgacgtcg gcgacaacaa ggcgatcgtc
     3841 aaggcgattg ccgcgaccaa tctcaacacg gtcgtcggca acatcgagtg ggcgaaccag
     3901 aaactgccgc cgttcgcgca gaagaatatc gcgaagacgc cgctcgtcgg cggccagtgg
     3961 cggctgcgcg ccggcggcaa caagtacgat atcgtcatca ccgacaacaa gaccgcgccg
     4021 gaaatcccgg tcggcggcca tatggagccg atcgcctgag gcaggtccgc ctcaatttac
     4081 gcgtggccga cgtccggccc gggtgagctg gaatttccgc cgccctttcc cgcgcaagcg
     4141 ggaatccaag ggctggcgct accgtgcgga aactggcggg tcggcgtctg cgcgcggaag
     4201 agtctctgga gcgcaatcgc ttcaagccga aatgattgcg ctctggcttt ctctggtgga
     4261 gcgtgatgtc ttcggaaaac cggctttgat ttttccgaac cgtgctctga cggcgggctg
     4321 ggcggcgtga tcctgaggct cgacaatctg acccgatcgt tcggctcgct gaaggctgtc
     4381 gacggcgtca gcctggacgt cgcaccgggc gaggcgctgg gcatcatcgg accgaacggc
     4441 gccggcaaat cgacgttgtt caacctgatc accgggctca tccggccaga cggcggtgcc
     4501 gtctggttcg acggccgcga catcacgcag gcgccgccgc gcgcgcgctg catcgccggc
     4561 atcggccgct cgttccagat tccgcacccg ttcgagaacc ttaccgtgtt cgagaacctg
     4621 ctcgtcgccg cggtccacgg ccgcaggcag cgcgaggctc aggtcaccga cgcctgcggc
     4681 gaaatcctgg agcgcaccgg cctcatcgct ttcgccaatc gccgagccgg cacgcttaac
     4741 ctgctcggcc gcaaacggct cgagctcgcc cgcgcgctcg ccggcgcgcc gcggctcttg
     4801 ctgctcgacg agatcgccgg cgggctgacc gaggccgaat gcgccgagct ggtgcacctc
     4861 atgcgcgcca tcaacgacgc cgggattacc atcgtgtggg tcgaacacgt cgtgcatgcg
     4921 ctgctcgccg tggtatcgcg gctcgcggtg ctcaacttcg gccgcaagat cgtcgagggc
     4981 gagccacgca cggtcatggc ctcggccgag gtcagggaga tctacatggg catcgcagcg
     5041 tgacgcagcc cggcggcacg gcagtgctcg agacaagcga actcaccgcc ttctacggcg
     5101 acttccaggc gctgttcggc atcaccttcg cgctcggcga aggcgagacg gtcgcgatca
     5161 tcggcgcgaa cggggcgggg aaatcgacct tcctgaaggc gatcgccggc ctgttgccgc
     5221 ggccggccgc ggcggtgcgg ctcaacgggc gcgacatcgg cgcgctgccg gcgttcgaga
     5281 tcgtcaagct cggcgtcgcc ctggtgccgg aaggccggcg gctctttccc tcgctg
//
LOCUS       DATMQB010000409         4082 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2349021, whole genome shotgun sequence.
ACCESSION   DATMQB010000409 DATMQB010000000
VERSION     DATMQB010000409.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4082)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4082)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4082
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2349021"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            205..924
                     /locus_tag="VNY79_11665"
     CDS             205..924
                     /locus_tag="VNY79_11665"
                     /inference="COORDINATES: protein motif:HMM:NF013468.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003725 - double-stranded RNA binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Sua5/YciO/YrdC/YwlC family protein"
                     /protein_id="HWX73151.1"
                     /translation="MTTATTETTRLTSDPIPPELLRVDIARLFEAMAAGGIGIVPLDV
                     AYAVVATTPGGIRRIFEAKRRSYDKPSGMFGSWRLSREVHRLDERRHAMVRELVEEER
                     IPFSVVAPFRTDHPLFAVVDPFVMQNSSKGGTLDMLINAGQFHDAIAEGAIAHGTAVF
                     GSSANLSLTGSKYRYADIDAPVREAAAIHFDYGQSKYAHKDGLASTIIDFGDFSVIRV
                     GHCFDRLKQAFTARFGITLRT"
     gene            939..1571
                     /locus_tag="VNY79_11670"
     CDS             939..1571
                     /locus_tag="VNY79_11670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012334405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HWX73152.1"
                     /translation="MSDPYKDIGFDSNRIGFGKRAGVVVVDFQKGFTESRFPLGGRPM
                     VERAVNNTAQLLAAARKAGLPVASCYTAYSSARDAPLWKIPTVVNEFHHGHPCTELDE
                     RIYDRAYDMVVCKTGPSIFFNTPVATFFVKEGVDTVIVSGCNTSGCVRASINDAFSYG
                     FRVIVPEPCCGDVDEGPHRDNLRDVGRRYADVVSLEEVLAYIETSGRRND"
     gene            1638..>4082
                     /locus_tag="VNY79_11675"
     CDS             1638..>4082
                     /locus_tag="VNY79_11675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014496256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HWX73153.1"
                     /translation="MAADRDDGDAGQRATRWVGRSVPRVEDAALLTGRGRYIDDLGVR
                     PGTLQTAILRSPHAHAEIEAIDCQAARAADGVFAVLTGADIVALTSSLVVGIKAPIDC
                     WPIATDRVRYVGEPVAIVVASDRYRAEDALDLIEVRYRQLPAIVDPVAAAAPDAPLLH
                     PRAQSNVVGERVFRYGDPEGAFAAAAHRVRVDVRYPRNSCTPIETYGVVAEYDAAEDA
                     YDILANFQGPFSLHPVMARALKVPGNRLRLRTPPDSGGSFGVKHAIFPYIVLIAAAAR
                     ATGRPVKWIEDRLEHLCGSVSATNRETTLEAAVGSDGRIAALAWDQLEDCGAHLRAPE
                     PATLYRMHGNLTGAYDIRHVKVRNRIVLTNKTPTGLNRGFGGPQMYYPLERLMQRIAI
                     ELKLDPLEVMRRNLVPATAMPYRTATGALLDSGDFAAALAAAVADGRLEALQARRDAA
                     RAQGRHYGIGFAAVVEPSVSNMGYITAALTPEERRRAGPKNGAQSTATISLDPLGAVS
                     VQVASTPQGQGHRTVLAQVVADALGLKPQDIRVVADVDTAKDAWSIASGNYSSRFAPA
                     VAGAAEIAAVRLRDRLARLAAAQLNVSPAEIVFADGRIAARANPDNAISFARIAAAGH
                     WAPGTIPAELDQTIRETVFWTPPELTAPNEADEVNSSLCHGFIFDFCGVEIDAASGAA
                     NIDSYVTMHDCGRILHPAMVAGQINGGFAQALGAALYEEYVYTPEGDFLSGTFADYLL
                     PTTMEVPEPIVLHRESPSPFTPLGAKGVGEGNCMSTPVCIANAIADALGLDALDLPAT
                     PAKLAAHIHGPEPPRAA"
BASE COUNT          654 a         1443 c         1333 g          652 t
ORIGIN      
        1 actgatcgcg gggacgaccc gtcgtcattc cggggccgag cgaagcgagg agcccggaac
       61 ccataaccgc gatccgtgaa tatggattcc gggctcgcgg cctgcggccg cgccccggaa
      121 tgacgacggg tctattccca aaccacaaag actgccgcga tcatccgcgt tataaggggg
      181 atgtccgcac gcgaggcgcc cccgttgacc actgcaacga ccgaaacaac aaggctgacc
      241 tccgacccca taccgccgga gttgctgcgt gtcgacattg cacgcctgtt cgaggcgatg
      301 gccgccggcg gcattggcat cgtgccgctc gacgtcgcct atgcggtggt cgcgaccacg
      361 cctggcggca tccggcgcat tttcgaggcc aagcggcgct cctatgacaa gccgtcgggg
      421 atgttcggca gctggcggct gagccgcgag gtgcatcgcc tggacgagcg ccggcatgcc
      481 atggtgcgcg aactcgtgga ggaggagcgg atcccgttct cggtggtggc gccgttccgc
      541 acagaccatc cgctgttcgc cgtggtcgat ccgttcgtga tgcagaactc gtcgaagggc
      601 gggacgctcg acatgctcat caacgccggc cagttccacg acgccatcgc cgaaggtgcg
      661 atcgcacacg gcaccgccgt gttcggctcg tccgccaacc tgtcgctcac cggcagcaag
      721 taccgctatg ccgacatcga cgcgccggtg cgcgaagccg ccgccatcca tttcgactat
      781 ggccagtcga aatacgcgca taaggacggg ctcgcgagca cgatcatcga tttcggcgat
      841 ttctcggtga tccgcgtcgg ccattgcttc gaccgcctga agcaggcgtt caccgcgcgg
      901 ttcggcatca cgctcaggac ttgagcccgg aggctgcgat gagcgaccct tacaaggaca
      961 tcggcttcga ctccaaccgc atcggtttcg gcaagcgcgc cggcgtcgtc gtggtcgatt
     1021 tccagaaggg ttttaccgag agccgctttc cgcttggcgg gcgcccgatg gtcgagcggg
     1081 cggtcaacaa tacggcgcag ctcttggcgg cggcgcgcaa ggccggcctg ccggtcgcct
     1141 cctgctacac cgcctattcg agcgcgcgcg acgcgccgct gtggaagatc ccgaccgtgg
     1201 tcaacgaatt ccaccacggc cacccctgca ccgaactcga cgagcgcatc tacgatcgcg
     1261 cctacgacat ggtcgtgtgc aagaccggcc cgtcgatctt cttcaacacc ccggtcgcca
     1321 cattcttcgt caaggaaggc gtcgataccg tcatcgtctc cggctgcaac acttccggct
     1381 gtgtgcgcgc gagcatcaac gacgcattct cctacggctt ccgcgtcatc gtgccggagc
     1441 cttgctgcgg cgatgtcgac gaaggcccgc accgcgacaa tctgcgcgac gtcgggcgcc
     1501 gctacgccga cgtcgtcagc ctcgaggagg tgctcgccta tatcgagacg tcgggacggc
     1561 gcaatgactg agccgcgtcc gttcgtgcgc cgcgaaggag cgcagcccgg ccgtcatcgc
     1621 cgctgatggc aagcccgatg gccgcggacc gcgacgacgg cgatgccggg caaagggcga
     1681 cgcgctgggt cggccgctcg gtaccgcgag tcgaagatgc ggcgctgctg accggccggg
     1741 gccgctatat cgacgatctg ggtgtgcgcc ccggcacctt gcagaccgcg atcctgcgct
     1801 cgccgcatgc gcacgccgag atcgaagcga tcgactgcca ggcggcgcgg gcggcggacg
     1861 gcgtgttcgc ggtcctcacc ggggccgaca tcgtggcgct cacctcgagc ctcgtggtcg
     1921 ggatcaaggc gccgatcgat tgctggccca tcgccacgga tcgcgtgcgc tacgtcggtg
     1981 agccggtcgc catcgtcgtc gcctccgacc gctaccgcgc cgaggatgcc ctcgacctca
     2041 tcgaggtccg ctatcgccag ttgccggcga tcgtcgatcc ggttgccgct gccgcgccgg
     2101 atgcgccgct gctgcatccg cgcgcacaaa gcaacgtcgt cggcgagcgc gtgttccgct
     2161 atggcgatcc ggagggcgcg ttcgccgcgg ccgcgcatcg cgtccgcgtc gatgtgcgct
     2221 atccgcgcaa ttcctgcacg ccgatcgaga cctatggcgt cgtcgccgaa tacgacgcgg
     2281 cggaggacgc ctacgacatc ctcgccaact tccaggggcc gttcagcttg cacccggtca
     2341 tggcgcgagc gctgaaggtc cccgggaacc gcctgcggct gcgcacaccg ccagactcgg
     2401 gcggcagctt cggtgtcaag cacgcgatct ttccctacat cgtgctgatc gcggccgcgg
     2461 cgcgggcgac cgggcggccg gtgaaatgga tcgaagaccg cctcgagcat ctgtgcggat
     2521 cggtgtcggc caccaaccgg gagacgacgc tcgaagccgc agtcgggagc gacggccgca
     2581 tcgccgcgct cgcctgggac cagctcgaag attgcggtgc gcacctgcgc gcgccggagc
     2641 cggccacgct ctaccgcatg cacggcaatc tgaccggcgc ctacgacatc cgccacgtca
     2701 aggtgcgcaa ccgcatcgtg ctcaccaaca agaccccgac cgggctcaac cgcggcttcg
     2761 gcgggccgca aatgtattac ccactggagc ggctgatgca gcggatcgcg atcgagctga
     2821 aactcgatcc gcttgaggtc atgcgccgca atctcgtccc tgctacggcc atgccgtacc
     2881 ggacggccac cggggcgttg ctggattcgg gagatttcgc cgccgcgctc gcggccgccg
     2941 tcgcggatgg ccggcttgaa gcgttgcagg cgcgccgcga tgcggcgcgc gcacagggca
     3001 ggcattacgg catcggcttt gccgcggtcg tcgagccgag cgtttccaac atgggctaca
     3061 tcaccgcggc gttgactccc gaggagcgcc gccgcgctgg gccgaagaac ggcgcgcaat
     3121 ccaccgcgac gatcagcctc gatccgctcg gcgccgtctc ggtgcaggtc gcctcgaccc
     3181 cgcagggcca gggccatcgc accgtgctgg cacaggtcgt cgccgacgcc cttggcctga
     3241 agccgcagga catccgcgtc gtcgccgacg tggataccgc caaggacgcc tggtcgatcg
     3301 cctcggggaa ttattccagc cgcttcgcgc ccgcggtcgc cggcgccgcc gagattgccg
     3361 ccgtgcgctt gcgcgaccgg ctggcgcggc tcgccgccgc gcaactcaac gtatcgcccg
     3421 cggagatcgt cttcgccgac ggccgcatcg ccgcgcgcgc aaatccggac aacgccattt
     3481 ccttcgcgcg catcgccgcg gccgggcatt gggcgccagg cacgatcccc gccgaactcg
     3541 atcagacgat ccgggagacg gtattctgga cgccacccga actcaccgcg ccgaacgaag
     3601 cagacgaggt caacagctcg ctgtgccacg gcttcatctt cgatttctgc ggcgtcgaga
     3661 tcgatgcggc ttccggcgcc gcgaacatcg acagctatgt caccatgcac gattgcggcc
     3721 gcatcctgca tccggccatg gtggcgggcc agatcaacgg cggctttgcg caggcgctcg
     3781 gcgcggccct gtacgaggaa tacgtctaca cgcccgaggg cgattttctc tccgggactt
     3841 tcgccgatta tctgctgccg accacgatgg aggtgccgga gccgatcgtc ctgcatcgtg
     3901 aatcgccttc gcccttcacg ccgctcggcg cgaaaggcgt cggcgaaggc aattgcatgt
     3961 cgacgccggt gtgcatcgcc aatgcgatcg cggatgcgct ggggctcgac gcgctcgatc
     4021 tgccggcgac gcccgcgaag ctcgcggccc acattcacgg gcccgagccg ccgcgcgccg
     4081 cg
//
LOCUS       DATMQB010000410         6120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1449073, whole genome shotgun sequence.
ACCESSION   DATMQB010000410 DATMQB010000000
VERSION     DATMQB010000410.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6120
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1449073"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            106..1071
                     /gene="mdh"
                     /locus_tag="VNY79_11680"
     CDS             106..1071
                     /gene="mdh"
                     /locus_tag="VNY79_11680"
                     /EC_number="1.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016616 - oxidoreductase activity, acting
                     on the CH-OH group of donors, NAD or NADP as acceptor
                     [Evidence IEA];
                     GO_process: GO:0005975 - carbohydrate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HWX73154.1"
                     /translation="MARNKIALIGAGQIGGTLAHLIGLKELGDVVLFDIMEGVPQGKA
                     LDLIQSSPVEGFDARFGGTNSYEGIEGAAVCIVTAGIPRKPGMSRDDLLGINLKVMEQ
                     VGAGIKKYAPNAFVICITNPLDAMVWALQKCCALPKSMVVGMAGVLDSARFRYFLADE
                     FNVSVEDVTAFVLGGHGDSMVPLVRYSAVAGIPLPDLVKMGWTTAARLDGIVERTRNG
                     GGEIVGLLKTGSAFYAPASAAIAMAESFLRDRKRVLPAAAWLNGEYGVKDLYVGVPVV
                     IGAKGVERIVEIELNGAERTMFENSAKAVESLVEACKKIAPDLGK"
     gene            1136..2305
                     /gene="sucC"
                     /locus_tag="VNY79_11685"
     CDS             1136..2305
                     /gene="sucC"
                     /locus_tag="VNY79_11685"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019170971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-forming succinate--CoA ligase subunit beta"
                     /protein_id="HWX73155.1"
                     /translation="MNIHEYQAKAVLREFGVPVPRGIAAFSVAEAVAAAKELGGPVWV
                     VKAQIHAGGRGKAGGVKVVKSVEDVGREAERLLGSTLVTHQTGPQGKEVRRLYIEEGS
                     NIDREYYLSALVDRTTGRVAFVASTEGGMEIEEVARTQPEKIRSFSIDPVTGFMVHHA
                     HEVAQALRFGREVAKQAEAMLPKLYQAFLAKDMNLLEINPLVVTKAGELVCLDAKIGF
                     DDSALYRHPDIAVLRDLNEEDAKEIEASRYDLSYVALDGTIGCMVNGAGLAMATMDII
                     KLYGEKPANFLDVGGGASKDKVTAAFKIITSDPQVKGILINIFGGIMRCDIIAEGVVA
                     AVKDVGLRVPLVVRLEGTNVALGKEIIAKSNLNVTSADDLDDAARKIVEAVRGGE"
     gene            2307..2828
                     /locus_tag="VNY79_11690"
     CDS             2307..2828
                     /locus_tag="VNY79_11690"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73156.1"
                     /translation="MVRSATFVCFMFVGTAYANERSAELVKSFQAFCASAPLDFAALD
                     AKATAMKLAVRKDVGTPQQTGKFARSKSWQVPLDSRQHELIASETRGPDGETASCGIG
                     AEDVDGEEVRRDLVEAMKLGAPLRQTATADGAQRVTTWKYADDTTVLLADGTPMKIPG
                     IFLTLQRRRNASR"
     gene            2908..3792
                     /gene="sucD"
                     /locus_tag="VNY79_11695"
     CDS             2908..3792
                     /gene="sucD"
                     /locus_tag="VNY79_11695"
                     /EC_number="6.2.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="succinate--CoA ligase subunit alpha"
                     /protein_id="HWX73157.1"
                     /translation="MPILVDRKTRVICQGITGRNGTFHSEQAIAYGTKMVGGTSPGKG
                     GTTHLGLPVFDTVAEAREKTDCNASVIYVPPAGAADAICEAIDAEIPLIVCITEGIPV
                     LDMVRVKRALCGSTSRLIGPNCPGVITAGQCKIGIMPGSIFQPGKVGIVSRSGTLTYE
                     AVFQTTNEGLGQTSAVGVGGDPVKGTDFVEILQMFLADKKTEAIVMIGEIGGSSEEDA
                     AQFLMDEARRGRKKPVVGFIAGRTAPPGRRMGHAGAIIAGGKGDAESKIAAMEAAEIR
                     ISPSPARVGKTVAEALRS"
     gene            3960..>6120
                     /locus_tag="VNY79_11700"
     CDS             3960..>6120
                     /locus_tag="VNY79_11700"
                     /EC_number="1.2.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006609293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004591 - oxoglutarate dehydrogenase
                     (succinyl-transferring) activity [Evidence IEA];
                     GO_function: GO:0030976 - thiamine pyrophosphate binding
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate dehydrogenase E1 component"
                     /protein_id="HWX73158.1"
                     /translation="MSRQDANAAFALTSFLYGGNARYIEDLYARYEADPAAVDAEWRS
                     FFQSLKDDARDVAESARGASWGRPDWPLADGGELAQAPGEWAEAGRAISGKVNAQAQT
                     KGVALSAADVERATRDSIRALMLIRAYRARGHFHANLDPLHLTPPHNEEELDPRTYGF
                     TESDLDRPIFLDHVLGLEFGTLREIIAILRRTYCQTLGVEFLHISDGAQKGWIQERIE
                     GPDKEITFTREGKRAILNKLVEAEGFEKFCDAKFTGTKRFGLDGAESMIPALEQIIKR
                     GGALGVREIVIGMSHRGRLNVLAQVMGKPHRAIFHEFKGGSSTPNEVEGSGDVKYHLG
                     ASSDREFDSNTVHLSLTANPSHLEIVDPVVLGKVRAKQDQHQCTPEDRICVMPLLIHG
                     DAAFAGQGVVAECFGLSGLRGHRTGGSLHFIVNNQIGFTTNPRYARSSPYPSDVAKMI
                     EAPIFHVNGDDPEAVVFAAKVATEFRQKFQKPVVIDMFCYRRHGHNEGDEPSFTQPRM
                     YKAIANHPGALEIYANRLVGEGVITEREVEKMKADWRGRLDAELESAQNYRANKADWL
                     DGRWAGFKSTADGDDPRRGRTGVEIGTLQDIGRRITTLAPDFHLHRTLTRFLENRRRA
                     IETGTNIDWATAEALAFCSLLLDGHRVRLSGQDSERGTFSQRHAVLFDQETEKRYTPF
                     NHLAEGQARFEVINSMLSEEAVLGFEYGYSLAEPNALT"
BASE COUNT         1123 a         2005 c         1988 g         1004 t
ORIGIN      
        1 gccgtgctgg ttccggaatg aaggaacggc ggctgcggct tgaacgcgcc tcgcgaacgg
       61 gctaatgacc cgcgggcgat ttcgaccagt tcaggggtct tcaaggtggc gcgaaacaag
      121 attgcgttga ttggcgcggg ccagatcggc ggcactctcg ctcatctgat cggcctcaag
      181 gagctcggcg acgtcgtcct cttcgacatc atggaggggg tgccgcaagg caaggcgctc
      241 gacctcattc agtcgtcgcc ggtcgagggc ttcgatgccc gcttcggcgg taccaattcc
      301 tacgaaggga tcgagggcgc cgcggtgtgc atcgtcaccg ccggcattcc gcgcaagccg
      361 ggcatgagcc gtgacgacct gctcggcatc aacctcaagg tgatggagca ggtcggcgcc
      421 ggcatcaaaa aatacgcgcc caacgccttc gtcatctgca tcaccaatcc gctcgacgcc
      481 atggtctggg cgctgcagaa gtgctgcgcg ctgcccaaat ccatggttgt cggcatggcc
      541 ggcgtcctcg attcggcgcg cttccgctat ttcctcgccg atgagttcaa tgtctcggtc
      601 gaggatgtca ccgccttcgt cctcggcggg cacggcgaca gcatggtgcc gctggtgcgc
      661 tattcggcgg tcgccggcat tccgctcccg gatctcgtga agatgggctg gaccacggcg
      721 gcgcggcttg acggcatcgt cgagcgcacg cgcaacgggg gcggcgagat cgtcggcctg
      781 ctcaagaccg ggtcggcctt ttacgcgccg gccagcgcgg cgatcgccat ggccgagagc
      841 tttctgcgcg accggaagcg cgtgctgccg gccgccgcct ggctcaacgg cgagtacggc
      901 gtcaaggacc tctatgtcgg cgtgcccgtg gtgatcggcg ccaaaggggt ggagcgcatt
      961 gtcgagatcg agctcaacgg cgctgagcgc accatgttcg agaactcggc gaaggccgtg
     1021 gagagcctgg tcgaagcctg caagaagatt gctcccgatc tcggcaagtg atctattcgg
     1081 tgtcccacct tctcgtttcc cgctgcacgg ccgccgggat acgtgagcca gccgcatgaa
     1141 tatccacgaa taccaggcga aagcggtgct gcgcgaattt ggcgtgccgg tgccgcgcgg
     1201 cattgccgcg ttcagcgtcg ctgaagccgt tgcggccgcc aaggagctgg gcgggccggt
     1261 ctgggtcgtg aaggcgcaga tccacgccgg cggccgcggc aaggccggcg gcgtgaaggt
     1321 ggtcaagtcg gtcgaggacg tcgggcgcga ggccgagcgc cttctgggct ccacgctggt
     1381 gacgcatcag accgggccgc agggcaagga ggtacgccgg ctctacatcg aggaaggctc
     1441 gaacatcgac cgggaatatt acctctcggc gctggtcgat cgcaccaccg gccgcgtcgc
     1501 ctttgtcgcc tcgaccgagg gcggcatgga aatcgaggag gtggcgcgta cccagccgga
     1561 gaaaatacgc tcgttctcca tcgatccggt gaccggcttc atggtccatc atgcccacga
     1621 ggtggcgcag gcgctgcggt ttggccgcga ggtcgccaag caggccgagg ccatgctgcc
     1681 gaagctctac caggcgttcc tcgccaagga catgaatctc ctggaaatca acccgctcgt
     1741 cgtcaccaag gccggggagc ttgtctgtct cgacgccaag atcggctttg acgacagcgc
     1801 gctctatcgc catcccgaca tcgccgtgct gcgcgatctc aacgaggagg atgccaagga
     1861 gatcgaggcg tcgcggtacg atctcagcta cgtcgccctc gacggcacca tcggctgcat
     1921 ggtcaatggc gccggcctgg cgatggcgac catggacatc atcaagctct acggcgagaa
     1981 gccggccaac tttctcgatg tcggcggcgg cgccagcaag gacaaggtga ccgccgcctt
     2041 caagatcatc acctccgacc cgcaggtgaa gggaattctg atcaacattt tcggcggcat
     2101 catgcgctgc gacatcattg ccgaaggcgt ggtggcggcg gtcaaggacg tcggtctgcg
     2161 ggtgccgctg gtggtgcggc tcgaaggtac caacgtcgcg ctcggcaagg agatcatcgc
     2221 caagtccaac ctcaacgtca cctcggccga cgaccttgac gacgccgcgc gcaagatcgt
     2281 cgaggcggtg cggggaggcg aatgacatgg tccgctctgc caccttcgtc tgtttcatgt
     2341 tcgtcggcac ggcctatgcg aacgagcgaa gcgcggaact tgtgaaatcc tttcaggcct
     2401 tctgcgcctc ggcgccgctc gatttcgccg cgctcgacgc caaggcaacg gcgatgaaac
     2461 ttgccgttcg caaggacgtc gggacgccgc agcagaccgg aaaattcgcc cgctcgaagt
     2521 cctggcaggt gccgctcgac agccggcagc acgagctcat cgccagcgag acgcgcggcc
     2581 ccgacggcga gactgcgtcc tgcggcatcg gcgccgagga cgttgacggc gaagaagtaa
     2641 ggcgcgatct cgtcgaggcg atgaagctcg gcgccccgct tcgccagact gcgacggcgg
     2701 atggcgccca gcgggtgacc acctggaaat atgccgacga cacgaccgtg ctgcttgctg
     2761 acggcacgcc catgaaaatc ccgggcatct ttctgacatt gcagcggcga aggaacgcga
     2821 gccgctgacc cgcacttcga aaagggcaag cgcgtcaacc gtgatgagat ccgggatcag
     2881 agaagaccgg cgaagcagag taggataatg cccatcctcg tcgacaggaa aacgagagtc
     2941 atctgccagg gcatcaccgg caggaatggt acgttccatt ccgagcaggc aatcgcctac
     3001 ggcaccaaga tggtcggcgg tacctcgccc ggaaaaggcg gtaccaccca tctcggcttg
     3061 ccggtgttcg ataccgttgc cgaggcgcgc gaaaagaccg actgcaacgc cagcgtcatt
     3121 tacgtgcctc ccgccggcgc ggcggacgcg atctgcgagg cgatcgatgc ggaaattccg
     3181 ctcatcgtct gcatcaccga gggcatcccg gtgctcgaca tggtccgcgt caagcgcgcc
     3241 ctctgtgggt cgacgtcccg cctgatcggg ccgaattgtc cgggcgtgat caccgccggt
     3301 cagtgcaaga tcggcatcat gccgggcagc atcttccagc cgggcaaggt cgggatcgtg
     3361 tcgcgctcgg ggacgctcac ctacgaggcg gtattccaga ccacgaacga gggcctgggg
     3421 cagacctccg ccgtcggcgt cggcggcgat ccggtcaagg gcaccgattt cgtcgagatc
     3481 ctgcagatgt tcctcgccga caagaagacc gaggcgatcg tcatgatcgg cgagatcggc
     3541 gggtcgtcgg aggaggatgc cgcccagttc ctcatggacg aggccaggcg gggccgcaag
     3601 aagccggtcg tcggcttcat cgctggccgt acggcgccgc cggggcggcg gatgggccac
     3661 gccggtgcga ttatcgccgg cggcaagggt gacgccgaat cgaagatcgc cgccatggag
     3721 gctgcggaaa tcaggatttc gccctcgccg gcgcgcgtgg gcaagacggt cgctgaagca
     3781 ttgcggtctt gattcattcc ttgtgtcttt tggctgccgt atcccgctat taaatgaggt
     3841 acgaagacgt gcccgccgcc ggggtgggtt gatccgcttt tgaccatcta ggcgttccta
     3901 gatcgcgctc aacgccaccc caggctgaaa ccgccggccc atcgctcagg aaatcgctca
     3961 tgtctcgcca ggacgcgaac gctgccttcg ctctcacctc cttcctgtac ggcggcaatg
     4021 cccgatacat cgaagacctc tacgcacgct acgaagccga tcccgccgcc gtcgacgccg
     4081 aatggcggtc gttcttccag agcctgaaag acgacgcccg cgacgtggcc gaaagcgccc
     4141 gcggcgcgtc ctggggacgg ccggactggc cactggccga cggcggcgag ctcgctcagg
     4201 cgcccggcga gtgggccgag gccggccgag caatcagcgg caaagtgaac gcgcaggcgc
     4261 agacgaaagg cgtcgcgcta tccgcggccg acgtcgagcg tgcgacccgc gactcgatac
     4321 gcgcgctcat gctgatccgc gcctaccgcg cccgcggcca tttccacgcc aacctcgatc
     4381 cgctccacct gacgccgccg cacaacgagg aggagcttga tccgcgcacc tacgggttca
     4441 ccgagtccga tctcgaccgc ccgatctttc tcgaccacgt gctcggcctc gaattcggca
     4501 cgctgcgcga gatcatcgcc atcctgcgac gcacctattg ccagacgctg ggcgtcgaat
     4561 ttctgcacat ctccgatggc gcgcagaaag gctggattca ggaacgcatc gaggggcccg
     4621 acaaggagat caccttcacc cgcgaaggca agcgcgccat cctcaacaag ctcgtcgaag
     4681 ccgaagggtt cgagaaattc tgcgacgcca aattcaccgg taccaagcgc ttcggacttg
     4741 acggcgccga gtcgatgatc ccggcgctgg agcagatcat caagcgcggc ggcgcgctcg
     4801 gcgtgcgcga aatcgtcatc ggcatgtccc accgcggacg gctcaacgtg ctggcgcaag
     4861 tcatgggcaa gccgcaccgc gccattttcc acgagttcaa aggcggctca tcgaccccga
     4921 acgaggtcga aggctccggc gacgtgaaat accatctcgg cgcctcgtcg gatcgtgagt
     4981 tcgacagcaa cacggtgcac ctgtcgctga ccgccaatcc ctcgcatctg gaaatcgtcg
     5041 acccggtcgt gctcggcaag gtgcgcgcca agcaggatca gcatcagtgt acgccggagg
     5101 accgcatctg cgtgatgccg ctcttgatcc acggcgacgc cgcgttcgcc gggcagggcg
     5161 tggtcgcgga gtgcttcggg ctgtcggggt tgcgcggtca ccgcaccggc ggctcgctgc
     5221 atttcatcgt caacaatcag atcggcttca ccaccaatcc gcgctatgcg cgctcgtcgc
     5281 cttatccctc cgacgtcgcc aagatgatcg aggcgccgat cttccacgtc aacggcgacg
     5341 atccggaggc ggtcgtgttc gcggccaagg tcgcgaccga attccggcag aaattccaga
     5401 agccggtcgt gatcgacatg ttctgctacc ggcgccacgg ccacaacgag ggcgacgagc
     5461 cctcgttcac ccagccgcgg atgtacaagg ccatcgccaa ccatcccggc gcgctggaaa
     5521 tctacgccaa caggctcgtc ggcgagggcg tgatcaccga gcgcgaagtc gagaagatga
     5581 aggccgactg gcgcggccgc ctcgacgcgg aacttgaatc cgcgcagaac taccgcgcca
     5641 acaaggccga ctggctcgac ggccgctggg cgggattcaa gagcaccgcc gacggcgacg
     5701 atccgcgccg cggacgcacc ggcgtcgaga tcggcacgct ccaggacatc ggccgcagga
     5761 tcacgacgct cgcgccggac ttccacctgc accgcacgtt gacccgcttc ctggaaaacc
     5821 ggcgccgcgc gatcgagacc gggaccaaca tcgactgggc cacggccgag gcgctggcct
     5881 tctgctcctt gctgctcgac gggcatcggg tgcggctttc cggccaggac agcgagcgcg
     5941 gcaccttttc gcagcgtcac gccgtgctgt tcgatcagga gaccgagaag cgctacacgc
     6001 cgttcaatca tctcgccgag ggacaggcgc gcttcgaggt catcaactcg atgctgtcgg
     6061 aggaggccgt gctcggcttc gagtacggct attcgctggc cgagcccaat gcgctcacca
//
LOCUS       DATMQB010000411         8212 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1742461, whole genome shotgun sequence.
ACCESSION   DATMQB010000411 DATMQB010000000
VERSION     DATMQB010000411.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8212)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8212)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8212
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1742461"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..346)
                     /locus_tag="VNY79_11705"
     CDS             complement(<1..346)
                     /locus_tag="VNY79_11705"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018094850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HWX73159.1"
                     /translation="MEAFFHDYIWPFAVIVAESVLLLVILLIAVAYVIYADRKIWAAV
                     QIRRGPNVVGPWGLFQSFADLIKFVLKEPVIPAGANKGVFLLAPLVTCTLALAAWAVI
                     PVNAGWVIADINV"
     gene            complement(354..2432)
                     /gene="nuoG"
                     /locus_tag="VNY79_11710"
     CDS             complement(354..2432)
                     /gene="nuoG"
                     /locus_tag="VNY79_11710"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050136 - NADH dehydrogenase (quinone)
                     activity [Evidence IEA];
                     GO_process: GO:0006120 - mitochondrial electron transport,
                     NADH to ubiquinone [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoG"
                     /protein_id="HWX73160.1"
                     /translation="MTKLLVDGREIDVPPEYTLLQACEAAGAEIPRFCFHERLSIAGN
                     CRMCLVELVGSPKPVASCAWGVRDCRPGPKGEPPEVKTRSPMVRKAREGVMEFLLINH
                     PLDCPICDQGGECDLQDQAMAYGVDQSRFRENKRAVEDKYLGALVKTSMNRCIQCTRC
                     VRFATEVAGVPELGAIGRGEDMEITTYLEEAMVSELQGNVVDLCPVGALTSKPYEFAA
                     RPWELNKTESIDVMDALGSAIRIDTRGREVMRILPRVNDDINEEWISDKTRHVVDGLR
                     TQRLDQPYLRENGRLRPASWSEAFAAIAARVERAKAGRVGALVGDLAAVEEIFALKDL
                     MTRLNVTNLDCRQDGSVLDPQWGRATYRFNATITGIDLADALLIVGSNPRREAAVLNA
                     RIRKRWRTAKSFPIGVIGGKAPLTYSYDYLGAGPETLATITRHSFGDVMRHAERPLIL
                     IGAQVFARTDAAAVAALAAKAAIDLGAVKEGWNGYSVLHGAASRVGALDLGFVPGEGG
                     LSARQMAAAGTLDLVFLLGIDEIDIGPGAFAVYIGTHGDRGALRADVVLPGAAYPEKS
                     AIYVNTEGRVQMATRASFPPGDAREDWAILRALSDVVGKRLPYDSLAQLRKALYQAHP
                     YLMRIGEIAPGDPADLHKLAARGGSPDRAPFRASVSSFYFTNPIARCSAVMAECSALA
                     ERRAAAAAAL"
     gene            complement(2429..2920)
                     /locus_tag="VNY79_11715"
     CDS             complement(2429..2920)
                     /locus_tag="VNY79_11715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006933302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3291 domain-containing protein"
                     /protein_id="HWX73161.1"
                     /translation="MTAIRHLAQLNIGRLRYPTDDPRVADFMNNLDLVNSLAERSKGF
                     VWRLKDDSGNATDIRPFADPTMIVNMSVCENVETLERFVWQTIHKRFYGRRPEWFEKM
                     EKPHFVMWWVAAGHRPTIEEAKERLEYLTAHGPSDHAFGWESVPAAQLWKAARCAPDG
                     QAA"
     gene            complement(2935..4260)
                     /gene="nuoF"
                     /locus_tag="VNY79_11720"
     CDS             complement(2935..4260)
                     /gene="nuoF"
                     /locus_tag="VNY79_11720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoF"
                     /protein_id="HWX73162.1"
                     /translation="MLADKDRIFKNLYGRRDWGLAGARARGAWDGTKAILEKGRDAII
                     AEMKASGQRGRGGAGFPTGLKWSFMPKQPVEGRPHYLVVNADESEPGTCKDREIMRHD
                     PHLLVEGCLIAGFAMGVHACYIYIRGEFIRERERLEAAVAQAYEGNLIGKNNLHGYDF
                     AIIVHHGAGAYICGEETALLESLEGKKGMPRLKPPFPANMGLYGCPTTVNNVETIAQV
                     PDIMRRGAAWFAGIGRPNNTGTKLYCISGHVERPCTVEETMGIPLRALIDTHAGGVRG
                     GWSNLLAVIPGGSSMPLVPAGPDQADTLLMDFDGCREKKSALGTAAVIVMDKSADIVR
                     AMARISYFYKHESCGQCTPCREGMGWMWRVLTRMAEGRAFRREIDMLWEVTTQIEGHT
                     ICAFGDGAAWPVQGLLRHFRPEIERRIDEYTANPGAGGVLDPVVPEAAE"
     gene            complement(4260..4952)
                     /gene="nuoE"
                     /locus_tag="VNY79_11725"
     CDS             complement(4260..4952)
                     /gene="nuoE"
                     /locus_tag="VNY79_11725"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoE"
                     /protein_id="HWX73163.1"
                     /translation="MSVRRLAEKQPTSFAFTPANLEWAKAQIAKYPPGRQQSAVIPIL
                     WRAQQQAGGWLPQKAIEAVAELLGMANIRVLEVATFYTMFNLDPVGRFHVQLCGTTPC
                     MLRGSEELKNVLRRVIGEAHHVSTDGTFSWIEVECLGACVNAPMVQINADYYEDLTPE
                     TLTRILNDLAAGKTPKPGPQINREFSAPVGGPSTLTDPSLYAKKPGEAANVHEAAAPK
                     PPIADATDPGRH"
     gene            complement(4949..6139)
                     /locus_tag="VNY79_11730"
     CDS             complement(4949..6139)
                     /locus_tag="VNY79_11730"
                     /EC_number="7.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit D"
                     /protein_id="HWX73164.1"
                     /translation="MNDVPTRNFTINFGPQHPAAHGVLRLVLELDGEVVERVDPHIGL
                     LHRGTEKLIEHKTYLQAIPYFDRLDYVAPINQEHAFCLAAERLLGLTLPKRAQVIRVL
                     YCEIGRLLSHLLNVTTQALDVGALTPPLWGFEEREKLMGFYERASGSRLHAAYFRVGG
                     VHQDLPPQLIDDIEAFCDPFLKVCDDLEELLTENRIFKQRNVDIGVVKLADAWARGFS
                     GVMVRGSGAVWDLRKAQPYECYSEFDFDIPVGKNGDCYDRYCVRMEEMRQSVRIMRQC
                     VEKLRSADAQGAIVVDDNKIVPPRRAVMKRSMEALIHHFKLYTEGFHVPAGEVYAAVE
                     APKGEFGVYLVADGSNRPYKCKIRAPSFPHLQAMDFLSRGHMLADVSAILGSLDIVFG
                     EIDR"
     gene            complement(6201..6647)
                     /locus_tag="VNY79_11735"
     CDS             complement(6201..6647)
                     /locus_tag="VNY79_11735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020087290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioesterase family protein"
                     /protein_id="HWX73165.1"
                     /translation="MKPTLKTGLTHRFAYKVPASKTVPHTYPEAPEIASMPNVFATGF
                     MIALMEWTCMQLLAPHLDPGEGSVGVHVDVSHLAATPIGMTVTVDVECVEIVGPRIAF
                     RVKAHDGADLIGEGRHERFVVEWDKFKARVTAKAEKVGEWRMASGA"
     gene            complement(6649..7302)
                     /locus_tag="VNY79_11740"
     CDS             complement(6649..7302)
                     /locus_tag="VNY79_11740"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit C"
                     /protein_id="HWX73166.1"
                     /translation="MDDTLEILGRTIADALAPAVKAYSVAHQELTLSADAGDIPSVMR
                     FLRDDPRCLFWSIIDVTAVDWPGRERRFDVVYHLLSPKHNVRIRVKAPAEEAVPVPSI
                     VEVFPGADWFEREIYDLYGIVFAGHPDMRRILTDYGFEGHPLRKDFPLTGFVELRYDD
                     ELKRVVYSPVRLAQEFRSFDFLSPWEGTDYVLPGDEKAQRKERPEEIGKAGGGGQGS"
     gene            complement(7305..7877)
                     /locus_tag="VNY79_11745"
     CDS             complement(7305..7877)
                     /locus_tag="VNY79_11745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002969417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit B family
                     protein"
                     /protein_id="HWX73167.1"
                     /translation="MELSGPGTLAPRQGLAAARPGEVPGADDPYFAGINGELADKGFL
                     VAAADDLIAWARTGSLMWMTFGLACCAVEMMQMSMPRYDAERFGFAPRASPRQSDVMI
                     VAGTLCNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIY
                     VPGCPPTAEALLYGVLLLQKKIRRTATIER"
     gene            complement(7868..>8212)
                     /locus_tag="VNY79_11750"
     CDS             complement(7868..>8212)
                     /locus_tag="VNY79_11750"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0016655 - oxidoreductase activity, acting
                     on NAD(P)H, quinone or similar compound as acceptor
                     [Evidence IEA];
                     GO_function: GO:0048038 - quinone binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit A"
                     /protein_id="HWX73168.1"
                     /translation="YLPLVIFIGVAAVIGLALLLSAFVVAYKQADPEKLSAYECGFNA
                     FDDARMKFDVRFYLVAILFIIFDLEVSFLFPWAVAFDKLGLFGFGSMMLFLAVLTIGF
                     IYEWKKGALEWN"
BASE COUNT         1412 a         2684 c         2705 g         1411 t
ORIGIN      
        1 cgacattgat gtcggcgatg acccagccgg cgttgaccgg gatgaccgcc caggcggcga
       61 gcgccagcgt gcaggtgacg agcggcgcga gcagaaacac gcccttgttg gcgccggcgg
      121 gaatgaccgg ctccttgagc acgaacttga tgagatcggc gaacgattgg aacaatcccc
      181 agggtccgac cacgttcggc ccgcgccgga tctggacggc ggcccagatc ttgcggtcgg
      241 catagatgac gtaggcgacg gcaatgagca ggatgacgag cagcagcacg ctttccgcca
      301 cgatgacggc gaacggccag atgtagtcgt ggaagaacgc ttccatcctg tcctcaaagg
      361 gccgccgcgg cggccgcgcg gcgttcggcc agcgccgaac actctgccat caccgccgag
      421 cagcgcgcga tcggattggt gaaatagaaa ctgctgacgc tcgcgcgaaa cggcgcgcgg
      481 tcgggactgc cgccccgcgc tgcgagcttg tgcagatcgg ccggatcgcc cggcgcgatc
      541 tccccgatgc gcatcagata tggatgcgcc tggtagagcg ccttgcggag ctgcgccagc
      601 gaatcgtagg gaagccgctt cccgacgacg tccgagagcg cgcgcagaat cgcccaatcc
      661 tcgcgcgcgt cgccgggggg aaaggaggcg cgcgtcgcca tctggacgcg gccctcggtg
      721 ttcacgtaga tcgccgattt ctccggatag gcggcgcccg gcagcaccac atccgcgcgc
      781 aacgcgccgc ggtcgccgtg ggtgccgata taaaccgcga atgcgcccgg cccgatgtcg
      841 atctcgtcga tcccgagcag aaagacgaga tcgagcgtgc ccgcggccgc catctgccgc
      901 gcgctcaagc cgccctcgcc gggcacgaag ccgagatcga gcgcgccgac gcgcgaggcg
      961 gcgccgtgga ggacgctgta gccgttccag ccctccttca cggcgccaag atcgattgcc
     1021 gccttggccg ccagcgccgc gacggccgct gcgtccgtcc gcgcaaagac ttgcgcgccg
     1081 atgaggatga gtgggcgctc ggcatggcgc atgacgtcgc caaagctgtg ccgggtgata
     1141 gtggcgagcg tctccggccc ggcgccgaga tagtcgtagc tgtaggtgag cggcgctttc
     1201 ccgccgatga ctccgatggg aaagctcttg gcggtgcgcc agcgcttgcg gatgcgggcg
     1261 ttgagtaccg ccgcctcccg gcgcgggttt gacccgacaa tgaggagcgc gtcggcgagg
     1321 tcgatcccgg tgatggtcgc gttgaaccgg taggtcgcgc ggccccattg cgggtcgagc
     1381 accgagccgt cctgccggca atcgaggttg gtcacgttga gccgggtcat cagatccttg
     1441 agcgcaaaga tctcctcgac cgcggcaaga tcgccgacca gcgcgcccac gcggccggct
     1501 ttggcccgct ccacccttgc ggcgatcgcg gcgaacgctt cgctccacga ggccggacgc
     1561 aggcggccgt tctcgcgcag atacggctga tcgagccgct gcgtccgcag cccgtcgacg
     1621 acgtggcgcg tcttgtcgga gatccactcc tcgttgatgt cgtcgttcac ccgcggcagg
     1681 atgcgcatca cctcgcggcc gcgcgtgtcg atgcggattg ccgagccgag cgcgtccata
     1741 acatcgatcg actcggtctt gttgagctcc cacgggcgcg ccgcgaactc atagggtttc
     1801 gaggtgagcg ccccgaccgg gcagagatcg acgacgttgc cctgcagctc ggagaccatc
     1861 gcctcttcga gataggtggt gatctccatg tcctcaccgc gcccgatggc gccaagttcg
     1921 ggcacgccgg cgacttcggt ggcgaagcgg acgcaccgcg tgcactggat gcagcggttc
     1981 atcgacgtct tgaccagggc gccgagatac ttgtcctcaa ccgcccgctt gttctcgcgg
     2041 aagcggcttt gatcgacacc gtaggccatc gcctggtcct gcaggtcgca ttcgccgccc
     2101 tggtcgcaga tcgggcagtc gagcggatga ttgatgagca ggaattccat caccccttcg
     2161 cgcgctttgc gcaccatcgg cgagcgggtc ttgacctccg gcggctcccc cttggggcca
     2221 gggcggcagt cgcgcacgcc ccaggcgcag ctcgcgaccg gcttcggcga gccgaccagc
     2281 tcgaccaggc acatgcggca attgccggcg atcgacagcc gttcgtggaa gcagaagcgc
     2341 gggatctcgg cgcccgccgc ctcacacgcc tgcagcagcg tgtactccgg cggaacatcg
     2401 atttcccttc cgtcgacgag aagcttggtc atgccgcctg cccgtccggc gcgcaacgcg
     2461 ccgccttcca tagttgcgcc gccggcacgc tctcccagcc gaaggcgtgg tcggaaggac
     2521 cgtgcgcggt cagatattca agccgttctt tcgcctcctc gattgtcggc cggtggccgg
     2581 ccgccaccca ccacatcacg aagtgcggct tttccatctt ctcgaaccac tccgggcgcc
     2641 ggccgtaaaa gcgcttgtga atggtctgcc aaacgaagcg ctcaagcgtt tcaacgtttt
     2701 cacagaccga catgttaacg atcatggttg gatcggcgaa cggccggata tcggtcgcgt
     2761 tgccgctgtc gtccttaaga cgccagacga atcccttgct gcgctcggcc aggctgttca
     2821 ccagatcgag gttgttcatg aaatcggcga cccgcggatc gtcggtcggg tagcgcagac
     2881 ggccgatgtt gagttgggca agatgcctga tcgccgtcat gccgcgctgc tcccctactc
     2941 cgccgcctcg ggcacgaccg gatcgagcac gccgccggca ccgggattgg cggtatattc
     3001 gtcgatgcgc cgttcgatct ccggccggaa atggcgcagc agcccctgca ccggccaggc
     3061 ggcgccgtca ccgaaggcgc agatagtgtg gccctcgatc tgggtcgtca cctcccacag
     3121 catgtcgatc tcgcgcctga aggcgcgtcc ctcggccatg cgcgtgagca cgcgccacat
     3181 ccagcccatg ccctcgcggc agggcgtaca ctggccgcag ctctcgtgct tgtagaagta
     3241 ggagatgcgc gccatcgcgc gcacgatgtc ggccgacttg tccatgacga tgaccgccgc
     3301 ggtgccgagc gccgatttct tctcgcggca gccgtcgaaa tccatgagca gcgtgtcggc
     3361 ctggtcgggt cccgccggca ccagcggcat cgacgatccg ccagggatga cggcgagcag
     3421 attgctccag ccgccgcgca cgccgccggc atgggtgtcg atgagcgcgc gcagcggaat
     3481 gcccatcgtc tcttcgacag tgcacggccg ctcgacgtgg ccggaaatgc aataaagctt
     3541 cgtgccggta ttgttcggcc ggccgatgcc ggcgaaccag gcggcgccgc ggcgcatgat
     3601 gtcgggcacc tgggcgatgg tctcgacgtt gttgacggtg gtcggacagc cgtagagccc
     3661 catattggcc gggaacggcg gtttcagccg cggcattccc ttcttgcctt cgaggctttc
     3721 gagcagcgcc gtctcctcgc cgcagatgta ggcgccggcg ccgtggtgaa cgatgatggc
     3781 gaagtcgtag ccgtggaggt tgttcttgcc gatgaggttt ccctcatagg cctgcgccac
     3841 ggccgcctcc agccgctcgc gctcgcggat gaattcgccg cggatgtaga tgtagcaggc
     3901 gtgaacgccc atggcgaagc cggcaatgag gcagccctcc accagcagat gcggatcgtg
     3961 ccgcatgatc tcgcgatcct tgcacgtgcc gggctccgac tcgtcggcgt tgacaacgag
     4021 gtagtgcggc cgcccctcca ccggctgctt gggcatgaac gaccatttga gtccggtcgg
     4081 gaacccggcg ccgccgcggc cgcgctgacc cgaggccttc atctcggcga tgatggcgtc
     4141 gcggcctttc tccaggatcg ctttggtgcc gtcccaggcg ccccgcgcgc gtgcgccggc
     4201 aaggccccaa tcgcgccggc cgtatagatt cttgaaaatg cgatccttgt cggcgagcat
     4261 cagtggcgtc ccgggtcggt ggcgtcggcg atcggaggtt tgggagcggc cgcctcgtgg
     4321 acgttcgcgg cttcgcccgg cttcttcgcg taaagcgacg ggtcggtcag cgtcgacggt
     4381 cctccgaccg gggcggagaa ctcgcgattg atctgcgggc ccggcttcgg cgtcttgccc
     4441 gccgccaggt cgttgaggat acgggtcaac gtctcgggcg tgaggtcctc gtaatagtcg
     4501 gcattgatct ggaccatcgg cgcgttgacg caggcgccga ggcattccac ctcgatccag
     4561 gagaaggtgc cgtcggtgct tacgtgatgc gcttcgccga tcacgcggcg caggacattc
     4621 ttcagttctt cggagccgcg cagcatgcac ggggtcgtgc cgcaaagctg cacgtggaag
     4681 cgcccgaccg gatcgagatt gaacatcgta tagaaggtcg caacctcgag cacgcggatg
     4741 ttggccatgc cgagaagctc ggccacggcc tcgatcgcct tctgcggcag ccagccgccc
     4801 gcctgctgct gcgcacgcca caggatcggg atcaccgcgg actgctgacg cccgggcgga
     4861 tatttggcga tctgcgcttt cgcccattcg agatttgccg gcgtgaaggc aaagctagtc
     4921 ggctgttttt cggcgagccg gcggacgctc atcggtcgat ctcgccgaaa acgatgtcga
     4981 gcgaaccgag aatcgcggag acatccgcga gcatgtggcc gcgggagaga aaatccatgg
     5041 cttggagatg ggggaagctc ggcgcgcgga tcttgcactt gtagggccga ttgctgccgt
     5101 cggccacgag atagacgcca aactcgccct tgggcgcctc gaccgcggcg tagacttcgc
     5161 cggcaggcac atgaaagccc tcggtataga gcttgaagtg atggatcagc gcctccatcg
     5221 agcgcttcat cacggcgcgg cgcggcggca cgatcttgtt gtcatcgacc acgatcgcac
     5281 cctgcgcatc ggccgagcgc aatttctcca cgcactgcct catgatgcgc accgattggc
     5341 gcatctcctc catgcgcacg cagtagcggt cgtaacaatc gccgttcttg cccaccggaa
     5401 tgtcgaaatc aaactcggag tagcattcgt agggctgcgc cttgcgcaga tcccagacgg
     5461 cgcccgagcc gcgcaccatg acgccggaga atccccgggc ccaggcgtcc gcgagcttga
     5521 ccacgccgat atcgacgttg cgctgcttga agatgcggtt ctcggtgagc agttcctcga
     5581 gatcgtcgca taccttgagg aacgggtcgc agaacgcttc gatgtcgtcg atgagctgcg
     5641 gcggcaggtc ctgatgcacg cccccgacgc ggaaataggc ggcgtgcaag cgtgatcccg
     5701 aggcccgctc gtagaaaccc atgagctttt cgcgctcctc gaagccccac agcggcggag
     5761 tgagcgcgcc gacgtccagg gcctgcgtgg tgacgttgag gagatgcgaa agcaggcggc
     5821 cgatctcgca atagagcacg cggattacct gcgcgcgctt gggcagtgtg aggcccagga
     5881 gccgctccgc cgcgaggcag aaagcatgct cctgattgat cggcgcgaca tagtcgagcc
     5941 gatcgaagta cgggatcgcc tgcagatagg tcttgtgctc gatcagcttc tcggtgccgc
     6001 ggtgtaggag gccgatatgc gggtcgacgc gctcgaccac ctcgccgtcg agttcgagta
     6061 cgaggcgaag cacgccgtgc gccgccggat gctgcgggcc gaagttgata gtgaaattgc
     6121 gggtgggcac gtcattcatg agagcgcgat attcctacgc ctgttgcttt ccctattcgc
     6181 cactcgctac tcgccattcc ctatgcgccg ctggccatcc gccattcgcc gaccttctcg
     6241 gctttcgccg tgacccgcgc cttgaacttg tcccactcca cgacaaagcg ttcgtggcgc
     6301 ccttcgccga tgaggtcggc cccgtcgtgc gctttgaccc tgaaagcgat gcgtggcccg
     6361 acgatttcca cgcactcgac atcgactgtc acggtcattc cgatcggggt cgccgcgagg
     6421 tggctcacat cgacgtgcac gccgacgctg ccttcgccgg gatcgaggtg gggggccaga
     6481 agctgcatgc aggtccattc catcagcgcg atcatgaagc cggtggcgaa gacgttcggc
     6541 atggatgcga tttctggcgc ctcggggtag gtgtgcggca cggtcttgct cgcgggcacc
     6601 ttataggcga agcggtgggt aagcccggtc ttgagcgtcg gcttcatctt acgacccctg
     6661 cccgccgccg ccggccttgc cgatttcctc cggcctttcc ttccgctgcg ccttttcatc
     6721 gcccggcagc acgtaatcgg ttccctccca gggcgagagg aaatcgaagc tgcggaattc
     6781 ctgggcaagc cgcaccggcg aatacaccac gcgcttgagt tcatcgtcgt agcgcagctc
     6841 gacaaagccg gtgagcggaa agtccttgcg cagcggatga ccctcaaagc catagtcagt
     6901 gaggatgcgg cgcatgtccg gatggccggc aaacacgatg ccgtagagat cgtagatctc
     6961 gcgctcgaac caatccgcgc cggggaagac ctcgacgatc gacggcaccg ggacggcctc
     7021 ttcggcgggc gccttcacgc ggatgcgcac gttatgtttc ggcgagagca ggtgatagac
     7081 cacgtcgaac cgccgctcgc ggcccggcca gtcgaccgcg gtcacgtcga tgatgctcca
     7141 gaacaggcac cgcgggtcgt cgcgcaggaa gcgcatgacg gaggggatgt cgcccgcgtc
     7201 ggcgctcagg gtcagctcct gatgcgcgac cgaataggcc ttcacggccg gggccagcgc
     7261 atcggcaatg gtccggccga ggatttcgag cgtgtcgtcc atgatcagcg ctcgatcgtg
     7321 gcggtgcggc ggattttctt ttgcagcagg agcacgccgt agagcagcgc ctcggcggtc
     7381 ggcgggcagc cgggcacgta gatgtcgacc ggtacgatcc ggtcgcagcc gcgcaccacc
     7441 gagtaggaat agtgatagta gccgccgccg ttggcgcacg atcccatcga gatgacgtag
     7501 cgcggctccg gcatctggtc gtagaccttg cgcaaagccg gcgccatctt gttgcacagc
     7561 gtgccggcaa cgatcatcac gtcggactgg cgcggcgaag cgcgcggcgc aaagccgaag
     7621 cgctcggcgt cgtaacgcgg catcgacatc tgcatcatct cgacggcgca gcaggcaagc
     7681 ccgaacgtca tccacatcag cgagccggtg cgcgcccagg cgatgagatc gtccgcggcg
     7741 gcgaccagaa atcccttgtc ggcgagttcg ccgttgatgc cggcgaaata cggatcgtca
     7801 gcgccgggca cctcacccgg gcgcgcggca gcaagccctt ggcgcggcgc gagagtgccg
     7861 ggtccgctca gttccattcg agcgctccct tcttccattc atagataaat ccaatcgtga
     7921 gcaccgcaag aaacagcatc atcgagccga agccgaacag gccgagcttg tcgaacgcca
     7981 ccgcccacgg aaacagaaag ctgacctcga ggtcgaagat gatgaagagg atggcgacca
     8041 ggtagaagcg cacatcgaac ttcatgcgcg cgtcgtcgaa agcgttgaag ccgcactcat
     8101 aggcggaaag cttttccggg tcggcctgct tgtaggcgac gacaaaggcc gagagcagga
     8161 gcgcgagccc gatgaccgcc gccaccccga tgaagatgac gagcggcagg ta
//
LOCUS       DATMQB010000412         3538 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4524076, whole genome shotgun sequence.
ACCESSION   DATMQB010000412 DATMQB010000000
VERSION     DATMQB010000412.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3538)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3538)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3538
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4524076"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..213)
                     /locus_tag="VNY79_11755"
     CDS             complement(<1..213)
                     /locus_tag="VNY79_11755"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73169.1"
                     /translation="MNEAPSSLPADAPAHDRSAINRLLLFFAIVYVVEGLGQVGGLIA
                     QPLSYYLKQEQGWTPSQVSAYLTIFNF"
     gene            complement(498..719)
                     /locus_tag="VNY79_11760"
     CDS             complement(498..719)
                     /locus_tag="VNY79_11760"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73170.1"
                     /translation="MTELSGSPGFAPPLAGKKLSRRRAVAFELVATVTLTISLVVAAT
                     AVSLGNRSLLERPSAAAPAAPQLDHAQGR"
     gene            complement(930..1559)
                     /locus_tag="VNY79_11765"
     CDS             complement(930..1559)
                     /locus_tag="VNY79_11765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HWX73171.1"
                     /translation="MFTLYSMQRSGNSYKARLALAQLRVPYRLIEVDILKGESHTPEF
                     LTKNPNGQVPLLEVAPGRYLAESNAILWYIAGGTPLAPEDRIDRADALQWMFFEQHSL
                     EPNLGAAYFWLTLIKGGRDLQRHAFEEWMEEGHRALGVMDKHLARHDFFAAGRYTVAD
                     IALYAYTHVAHLCDYDLKPFPAVRTWLKRVAAVPGHVAMDWRPEPALAM"
     gene            complement(1602..2993)
                     /locus_tag="VNY79_11770"
     CDS             complement(1602..2993)
                     /locus_tag="VNY79_11770"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 87 protein"
                     /protein_id="HWX73172.1"
                     /translation="MERARQLLRSGDWLTRERMRLVALAVLIASAAGFLYLIVTAHGL
                     VDFQGRPLGTDFSNVYAAGTHVRDGDPEAPFDLSRQHAREQQIFGDATPFYGWHYPPF
                     FLFVAATLALMPYGVALAVWQAVTFGLYLLTIWAIIGSSFRGARSAIPESIATALPRS
                     APSRVDDPSHGTGAGADPLWLLLAVAFPAVLINIGHGQNGFLTAALIGGALVMLDRRP
                     LLAGVLFGLLTYKPQFGLMVPLVPAVSGRWRCFAAAAATVALLALATTAAFGPQIWHA
                     FLDSTRFTRLIALEQGNTGWYQIQSVFSWARMWGASIPLAYMFQGALAAALAAALVAV
                     WRGAAPYRLKAAALCLAAILATPYTFDYDMVVLAPAIAFLAADGFARGFRPWEKTALA
                     TLWMAPLVARSVTQATLVPFGVAAMLAMFILLLRRTTSDFISPLAFSDSTTRIADDAS
                     GTARGHDIAAFKS"
     gene            3256..>3538
                     /locus_tag="VNY79_11775"
     CDS             3256..>3538
                     /locus_tag="VNY79_11775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008547844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0009058 - biosynthetic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HWX73173.1"
                     /translation="MAFLADRLSRIKPSATIAVTDKARALKAAGRDVIGLGAGEPDFD
                     TPENIKEAAIKAIRDGKASKYTAVDGIPELKAAVARKFQRENGLAYKPSQ"
BASE COUNT          649 a         1096 c         1242 g          551 t
ORIGIN      
        1 aaaattgaag atcgtcaggt aggcgctgac ctgcgacggc gtccagccct gctcctgttt
       61 caggtagtag ctcagcggct gggcgatcag cccgccgacc tggccgaggc cctcgacgac
      121 gtagacgatc gcaaagaaca gcagcagccg gttgatcgcg ctgcggtcat gcgccggagc
      181 gtcggccggg agcgaggaag gcgcctcgtt cataggatcg cagctcgcag gagtcggtcg
      241 cgcaatctgt gaactggtca gcgccaccgg ttaggttcac gccgatccta tcgagcggcg
      301 gcggcgctgt cgcttgttgt gccaagtctg ccctgcgcga ctcgtcattc cggggcgcgg
      361 gcgctcgccc gcgtgcgcgg aatccatagt cactgcccgt ggtcatggat tgcggacggc
      421 cacgcggagc cttgtcatcg ggccggccac ttcgggccgg gccgttggct cggcttccag
      481 aatgaccgca gaaagcgcta ccgcccttgc gcgtgatcga gctgcggcgc cgccggcgcg
      541 gcggccgagg gccgctccaa cagcgacctg ttgccgagcg acacggcggt cgccgcgacg
      601 acgagtgaaa tggtgagagt gacggtcgcg accagttcga atgcgaccgc gcgtcgcctc
      661 gatagtttct tgccggcaag cggtggtgcg aaaccggggc tgccggagag ctctgtcatc
      721 ggggtcatcc ttgggggtca tcctcgcgaa tcgaatcagg tgttgcttgc atcatcgccg
      781 cggatgccgg cgcgcgtccg gctggacttg ggcgaagtca ttgaagaagc acggcgattt
      841 cgtgagttct gtttaatgga tggttaacgg gagggccgaa aaggacgatt gttcgccact
      901 gtgactttgg cgtcacttcg atgggcgaat cacatcgcaa gcgccggttc cggccgccag
      961 tccatggcca catgaccggg caccgcggcc acgcgcttga gccaggtgcg caccgcgggg
     1021 aagggcttga ggtcgtagtc gcacagatgc gcgacgtgcg tataggcgta gagcgcgata
     1081 tcagccacgg tgtaacgccc ggcggcaaag aagtcgtgcc gcgccaggtg cttgtccatc
     1141 acgccgagcg cgcggtggcc ttcctccatc cattcctcga aggcgtggcg ttgcaggtcg
     1201 cgcccgccct tgatcagggt aagccagaaa taggccgcgc ccagattggg ctcgaggctg
     1261 tgctgttcga agaacatcca ttgcagcgcg tcggcacgat cgatgcggtc ctccggtgcg
     1321 agcggtgttc cccccgcgat gtaccagagg atggcgtttg attcggcgag gtagcggccc
     1381 ggcgcgactt caaggagcgg cacctgcccg ttcggatttt tcgtcaggaa ctccggggtg
     1441 tggctctcgc ccttgaggat gtcgacctcg atcagccgat aagggacgcg cagctgcgcc
     1501 aaggcgagcc gcgccttgta gctgttgccg gaacgctgca tcgaatagag cgtaaacatg
     1561 gcgagccgcc aatccctcgc atgacatggc cttgttgcgc tctacgactt gaacgcggcg
     1621 atgtcatgac cgcgcgccgt gccactcgcg tcgtctgcaa ttctagtggt ggagtcagag
     1681 aaagccagcg gcgagatgaa atcgctcgtg gtgcgccgca acaagagaat aaacattgcg
     1741 agcatcgccg caacgccgaa aggaacaagt gtcgcttgtg tgacactgcg cgccacgagc
     1801 ggcgccatcc aaagcgtggc cagcgccgtc ttctcccacg gtcggaaccc gcgcgcgaat
     1861 ccgtcggcgg cgaggaaggc gatggcaggc gcgagcacca ccatgtcgta gtcgaaggtg
     1921 tagggcgtcg cgaggatcgc agcgaggcag agcgccgccg ccttgagccg atagggcgcg
     1981 gcgccgcgcc acaccgcgac cagcgcggcg gcgagcgcgg ccgccagtgc gccctggaac
     2041 atgtaggcca gcgggatcga tgcgccccac atgcgcgccc aggagaacac gctttgaatc
     2101 tggtaccagc cggtgttgcc ctgttcgagc gcgatgagac gcgtgaaacg ggttgagtcg
     2161 aggaatgcgt gccagatttg cggaccgaag gcggcggtag ttgcgagcgc gagcagcgcc
     2221 accgtcgccg cggcagcggc aaagcaacgc cagcgcccgc ttaccgccgg cacgagcggg
     2281 accatcagcc cgaattgcgg tttgtaggtc agaagcccga acaggacgcc ggcaagaagc
     2341 ggccggcgat cgagcatgac cagcgcgccg ccgatgagcg cggcggtgag gaacccgttc
     2401 tggccgtgac cgatgttgat cagcacggca ggaaaggcga cagcgagcag gagccagagc
     2461 ggatcggcgc cggcgccggt tccgtgcgag gggtcgtcga ccctgcttgg cgctgatctc
     2521 gggagcgcgg tggctatgga ttccgggatc gcgctgcgcg cgccccggaa tgacgagccg
     2581 atgatcgccc agatcgtgag aagataaagg ccgaacgtga ccgcctgcca gactgcgagc
     2641 gcaaccccgt agggcatcaa cgccaaagtc gcggcgacga acagaaagaa cggcggatag
     2701 tgccagccgt agaacggcgt cgcgtcgccg aagatttgtt gctcgcgcgc gtgctggcgg
     2761 gagaggtcga acggcgcctc cgggtcgcca tcgcgcacat gggtgccggc ggcatagacg
     2821 ttggagaagt cggttccgag cggccggccc tggaaatcga cgagcccgtg cgcggtgacg
     2881 atcagataga ggaagccggc ggcggaagcg atgagcaccg cgagcgcgac cagccgcatg
     2941 cgttcgcggg tgagccagtc accgcttcgc agaagttggc gcgcccgctc catgttggct
     3001 ccgtggtggg acgagtggcg ccggcattag gccagccgac gcttaatgga gcattgagcg
     3061 gcctccgctc tcgtgcggca cagggagccg ccccgccccg cggcctcagg gattgattgc
     3121 atcgtgctcc gctgcttgca gaccatgcct tggggaaagc gcgcacacga tttggcgagc
     3181 aggcgggact aagccttgcc tgtgcgctac gggcgcttta ggaagcacgc gcctcaaggc
     3241 agctggagac gagcaatggc cttcctcgcg gaccgcctgt cgcgcatcaa gccgtcggcg
     3301 acgatcgcgg tcaccgacaa agcgcgcgcg ctcaaggcgg ccggccgcga cgtcatcggg
     3361 ctcggcgccg gcgagccgga cttcgacacg ccggagaaca tcaaggaagc ggcgatcaag
     3421 gcgatccgcg acggcaaggc gtcgaagtac accgccgtcg acggcatccc ggagctcaag
     3481 gccgcggtcg cgcgcaagtt ccagcgcgag aacgggctcg cctacaagcc ctcgcaga
//
LOCUS       DATMQB010000413         5122 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2671779, whole genome shotgun sequence.
ACCESSION   DATMQB010000413 DATMQB010000000
VERSION     DATMQB010000413.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5122)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5122)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5122
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2671779"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..234
                     /locus_tag="VNY79_11780"
     CDS             <1..234
                     /locus_tag="VNY79_11780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73174.1"
                     /translation="AARNRNFRLLHMACLAENRRMQQLARKFDAELSFDFGGVIGEVE
                     SSRHAAVADARIHGRRPRLRDRDARPAVALLRA"
     gene            complement(263..826)
                     /gene="thpR"
                     /locus_tag="VNY79_11785"
     CDS             complement(263..826)
                     /gene="thpR"
                     /locus_tag="VNY79_11785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008664 - 2'-5'-RNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RNA 2',3'-cyclic phosphodiesterase"
                     /protein_id="HWX73175.1"
                     /translation="MPRLFTGLEIPPQVAQSLAMMRGGLPGARWIDPENYHLTLRFIG
                     DIDDALARDIASLLGGVQRAPFELRLDGLSSFGGRKPRALVAAAAPVAPLMDLHAEHE
                     RLLQRLGLEPEGRKYTPHVTLARLRDSSSRQVAEYLTARAHYRSLPFEVSRFVLFSSR
                     SSVGGGPYVVEAAYPLASMQARWAYGR"
     gene            complement(910..1551)
                     /locus_tag="VNY79_11790"
     CDS             complement(910..1551)
                     /locus_tag="VNY79_11790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arylesterase"
                     /protein_id="HWX73176.1"
                     /translation="MLRVAAAAALCCILLAAGAAIPSAYGATPVKIVALGDSLTAGLG
                     LPSNDGFVPRLQAALSAKGVAAELENAGVSGDTASGGLTRLDWSVPPNTDAVILELGA
                     NDMLRGIDPQVTYTALDGILQRLSQRHIAVLLCGMRAMPNLGAEYARSFERIYPELAA
                     KYGVLLYPFFLAGTAADLTLRQVDGLHPNAAGVNAIVAHIFPKVQELIAQIRN"
     gene            1625..2377
                     /locus_tag="VNY79_11795"
     CDS             1625..2377
                     /locus_tag="VNY79_11795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018318878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73177.1"
                     /translation="MNDTSGLPFAGDAVALSGVNLSLGRGAARVHILRDIHVNIGRGQ
                     AVGLLGPSGSGKSTLLMVMTGLERADSGSVVVAGEDLQKLSEDGLARFRGKNIGIVFQ
                     AFHLIPTMTALENVAVPLELAGERDAFARAAHELTAVGLAARLHHYPTELSGGEQQRV
                     AIARALAPNPAIVVADEPTGNLDEATGADIIELLFRGHRERGSTLVLVTHDTALTAHC
                     DRVLHLHSGRIVDASSSPVPAGARHEQMAKNE"
     gene            2374..4911
                     /locus_tag="VNY79_11800"
     CDS             2374..4911
                     /locus_tag="VNY79_11800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HWX73178.1"
                     /translation="MSALALRFAWRELRGGPRGFGVFVACIVLGVMAIAGVGSVAKSL
                     SDGLSSAGRVILGGDLAFSLVQREASGEEQAFLGAHGVFSVAATLPTMARTDDGRAAL
                     VEIKAVDGAYPLFGAVATNPAMPPPELFARQGDAFGAAVDPALLSRLDLKPGDRIAIG
                     NAAIELRAVLTGEPDKLAGGIGFGPRVLISEAALRASGLLQPGSIVRWQYRLRLPDRE
                     ASDGAVASVEKAARSAHPNAGWDIRTRSKASPQLERNVERFSQYLTLVALTALLVGGV
                     GVANAVASHLARKRDSIGTMKALGATGAGVFAVYCTQIVLVALFATLLGAVLGAALPF
                     VIAKAFGSLIPLPVAPSLYPSTLVLSIAYGMLTALAFALWPLGRAHDISVSMLFRDQI
                     AAERRWPRRRYVIATVSIIAALAALAVLFTYDHRLAAIFLASAALVFVALRLVAMLVM
                     AVARRLPRPRSTPLRLAIANIHRPGALTPSVVLSLGLGLCLLVTLIEIDGNLHRQFTA
                     GLPEKAPSFFFLDIPSADAERFDGVVRAQAPRSTLERVPMLRGRIVAANGIKAEDLKP
                     GEGSAWVLRGDRGITYATAVPDGSRVVAGDWWGADYAGAPLVSLESKTAADLNLKVGD
                     SVTVNVLGRNITARIANLRAVDWQNLGINFVLVFSPGIFDGAPHSDIATLTFADGGTT
                     AEEATLIKALAVSFPSVTAVRVKDALDAVDTLVGKLVLALRGASAITLVAAALVLGGA
                     LAASQRFRIYDAVILKTFGATRARLTAAYALEYLLIGLATAIFAVGAGTLAAYFVVTG
                     IMEFPFEWVAAAAIETAAAALAVTVAIGLAGTFGALGRKPAEVLRNL"
BASE COUNT          811 a         1756 c         1688 g          867 t
ORIGIN      
        1 gccgcgcgca accgcaactt ccgactgctg cacatggcct gtctggccga gaaccgccgc
       61 atgcagcagc tcgcgcgcaa gttcgacgcc gaactgtcct tcgatttcgg cggcgtcatc
      121 ggcgaagtgg agtcctcacg ccacgccgct gtcgctgatg cgcgaattca tggccgacgg
      181 ccacggcttc gcgaccgcga tgctcgacct gcagtcgcgc tgctgcgcgc gtgacggtgc
      241 gccgcttcca gagaacaata cctcagcgcc catacgccca tcgcgcctgc atcgaggcga
      301 gcggataggc cgcctcgacg acatagggtc cgccaccgac cgacgagcgc gaggagaaca
      361 gcacgaagcg cgacacctcg aacggcaatg aacgatagtg cgcgcgcgcc gtgagatact
      421 cggcaacctg gcggctcgag gaatcgcgca gccgcgccag cgtgacatga ggcgtgtatt
      481 tgcgtccctc gggctcgagg ccgagccgct gcagcagccg ctcgtgttcc gcgtgcaggt
      541 ccatcagcgg cgcgaccggc gccgccgcgg cgaccaatgc gcgcggcttg cggccgccga
      601 acgaggaaag cccgtcgagg cgaagctcga acggcgcgcg ctgcacgcct ccgaggagac
      661 tggcaatgtc gcgcgccagg gcgtcgtcga tgtcgccgat gaagcgcagc gtgaggtgat
      721 agttctccgg atcgatccag cgcgcacccg gcagcccgcc gcgcatcatg gcaagcgact
      781 gggcgacctg aggcggaatt tcgagaccgg tgaacagacg tggcatgaca cctgcgcctc
      841 gtggccggcg attcgcagca aggcgcagca tgagggcatc gctcacgccg cgcaagtctg
      901 cggcggctgt tagttgcgga tctgggcaat gagttcctgc actttaggga agatgtgcgc
      961 gacaatcgca ttcacgccgg cggcgttggg gtgcagcccg tcgacctgcc gcagcgtaag
     1021 gtcggcggca gttccggcca ggaagaaggg atagagcagc accccgtatt tggcggcgag
     1081 ctccggatag atacgctcga aggagcgcgc atactcggcc ccgaggttgg gcatggcccg
     1141 catgccgcac aagagaacgg cgatatggcg ttggctcagc cgctgcagaa tcccgtcgag
     1201 cgccgtatag gttacctgcg gatcgattcc gcgcaacatg tcgttggcgc ccagctcgag
     1261 gatcacggca tcggtgttcg gcggcactga ccagtcgagc cgcgtgagcc cgccgctcgc
     1321 cgtatcgccg gagacgccgg cattttctag ctctgcggcg acgcctttgg ccgacagtgc
     1381 ggcctgtagc cgcggcacaa agccatcgtt gctcggcagt cccaaacccg ccgtcaagga
     1441 gtcgccgagc gccacgatct tgacgggcgt cgcaccgtaa gctgatggga tagccgcacc
     1501 ggctgcgagc agtatgcaac aaagcgccgc cgcggcggca acgcgcagca tttggcgcaa
     1561 gccgctcccg taaccatatg agctgccacg catcgcccat gagaggcgcg ggtcggctgc
     1621 agacatgaat gacacgtcgg ggcttccttt cgctggcgat gcggtggcgc tgagcggggt
     1681 caatctctcg cttggccggg gcgccgcccg ggtgcatatc ctaagagaca tccacgtgaa
     1741 tataggtcgc ggacaggccg tgggcctgct cggtccgtca ggatcgggca aatcgacgct
     1801 gctcatggtg atgaccggcc tcgagcgcgc cgacagcggc tcggtcgtcg tcgccggcga
     1861 ggatctgcag aagctcagcg aggacggtct cgcgcgcttc cgcggcaaaa atatcggcat
     1921 cgtcttccag gcgttccacc tgataccaac catgacggcg ctggaaaacg tcgcggtgcc
     1981 gctcgaactc gccggtgaac gcgacgcttt cgcgcgcgcc gcgcatgagc tgacggcggt
     2041 cggcttggca gcgcgcctgc atcactatcc caccgaactc tcaggcggcg agcagcagcg
     2101 cgtggcgatc gcccgggcgc tggcgcccaa tccggccatc gtcgtcgccg acgaaccgac
     2161 cggcaatctc gacgaagcga ccggcgccga catcatcgag cttctgttcc gcggtcatcg
     2221 cgagcgcggc agcacgctcg tcctcgtcac ccacgatacc gcactcaccg cccattgcga
     2281 tcgcgtgctg cacctgcatt cgggacggat cgtcgacgcc tcctcctcgc ccgtccccgc
     2341 gggagcgcgg cacgagcaaa tggcaaagaa cgaatgagcg cgctggcgct gcgtttcgcc
     2401 tggcgcgagc tgcgcggtgg gccgcgcggc ttcggcgttt tcgtcgcctg catcgtgctt
     2461 ggcgtcatgg cgatcgccgg ggtcgggtcg gtggccaaga gcctctccga cggcctctcc
     2521 agcgccggcc gtgtgattct cggaggcgat cttgccttct cgctggtaca gcgcgaggcg
     2581 agcggcgagg agcaggcgtt tctcggcgcg cacggtgttt tctcggttgc ggcgacgctg
     2641 ccgaccatgg cacggacgga tgacgggcgg gcggcactgg tcgagatcaa ggccgttgac
     2701 ggcgcctacc cgctgttcgg agcagtcgcc acgaatccgg ccatgccgcc tcccgagttg
     2761 tttgcgcggc aaggagacgc gttcggcgcc gcggtcgatc cggccctcct cagccggctc
     2821 gatctcaagc ccggcgaccg catcgcgatc ggcaatgcgg cgatcgagct gcgcgccgtg
     2881 ctcacgggcg agcccgacaa gctcgccggc gggatcggct tcggcccgcg cgtcctcatc
     2941 agcgaggcgg cgctgcgcgc gagcggcctc ctccagcccg gcagcatcgt gcgctggcaa
     3001 taccggctgc ggctacccga tcgcgaggcg agcgacggcg cagtggcgtc ggtcgagaag
     3061 gcggcgcgga gcgctcaccc caatgccggc tgggatatcc gcacgcgcag caaggcctcg
     3121 ccgcagctcg aacgcaatgt cgagcgtttc agtcaatacc tcacgctggt cgccttgacc
     3181 gcgctgctcg tcggcggcgt cggcgtcgcc aatgcagtcg cgagccatct cgcgcgcaag
     3241 cgcgactcga tcggcacgat gaaggcgctt ggggcgaccg gcgccggcgt ctttgccgtc
     3301 tattgcacgc agattgtgct ggttgcgttg tttgctacgt tgcttggggc ggtgctcggc
     3361 gcggcgctgc cgttcgtgat cgcaaaggcg ttcggttcgc ttattccgct gcccgtcgcg
     3421 ccctctctct atccaagcac gctcgtcctt tcgatcgcct acggcatgct cacggctctc
     3481 gcctttgccc tgtggccgct cggacgggcc catgacattt cggtgtcgat gctgttccgc
     3541 gaccagatcg ccgccgagcg acgctggccg cgacgccgct acgtcatcgc caccgtatcg
     3601 atcatcgccg cgttggcggc gctggcggtt ctgttcactt atgaccatcg ccttgcggcg
     3661 atcttcctgg cctccgccgc gctcgttttc gtcgcgctac gcctcgtcgc catgctggtg
     3721 atggcggttg cgcgccggct gccgcgcccg cggtcgacgc cgctccgcct cgccatcgcc
     3781 aatatccacc ggccgggggc gctgacgccg agcgtcgtgc tctcgctcgg cctcggtctt
     3841 tgcctgctgg tcaccctgat cgagatcgac ggcaacctgc atcgccagtt caccgccggg
     3901 ctgccggaaa aggcgccctc gttcttcttc ctggacatcc catcggccga tgccgaacgc
     3961 ttcgatggcg tggtgcgcgc acaggcgccg cgctccaccc tggagcgcgt gcccatgctg
     4021 cgcggccgca tcgtcgccgc gaacggcatc aaggcggaag acctcaagcc cggcgaggga
     4081 tcggcctggg tgctgcgcgg cgaccgcggc atcacctacg cgacggccgt cccggacggg
     4141 tcgcgtgtcg tcgccggcga ctggtggggc gccgactacg ccggggcgcc gctcgtttcg
     4201 ctcgaaagca aaaccgccgc cgatctcaac ctcaaggtcg gcgacagcgt caccgtcaac
     4261 gtgctcggcc gcaacatcac ggcacggatc gccaacctgc gcgccgtcga ctggcaaaac
     4321 ctcggcatca atttcgtgct ggtgttctcg cccggcattt tcgatggtgc accgcacagc
     4381 gatattgcca cgctgacctt tgccgacggc ggcacgaccg ccgaggaggc gacgctcatc
     4441 aaggcgctcg cggtttcctt tccgagcgtc accgcggtgc gggtgaagga cgcgctcgac
     4501 gcggtagata cactggtcgg caaactcgta ttggcgttgc ggggtgcgag cgcgatcacg
     4561 ctcgtcgccg cagccttggt gctcggcggc gcgctcgccg ccagccagcg cttccgcatc
     4621 tatgacgccg tgatcctgaa aaccttcggc gcgacgcggg cgcgcctgac cgcggcctat
     4681 gcgctcgaat atctcctgat cgggctggcc acggccattt tcgcggtcgg cgccggcacg
     4741 ctcgccgcct attttgtcgt gactggcatc atggaatttc ccttcgaatg ggtggcggcc
     4801 gccgccatcg aaacggcggc cgcggcgcta gcggtgaccg tggcgatcgg gctcgctggc
     4861 acgttcggtg cgctcggccg taagccggcc gaggtgctgc gcaatctcta agcctttccc
     4921 ggacctagcc accaatgcgt actgcaccgc attcggaaaa aggcacgtta gaaccgtgaa
     4981 aacagcatga aaaacttgta accagccgga aaatatggct ttgcgcccat ctggcgcgga
     5041 ctgccctttc gcattagatt cttgccacac caattccggc tttcgccgga tacagccccg
     5101 gcctgagcgc cgggacaaaa ca
//
LOCUS       DATMQB010000414        13703 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4524696, whole genome shotgun sequence.
ACCESSION   DATMQB010000414 DATMQB010000000
VERSION     DATMQB010000414.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 13703)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13703)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13703
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4524696"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..321)
                     /locus_tag="VNY79_11805"
     CDS             complement(<1..321)
                     /locus_tag="VNY79_11805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007760602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrilase-related carbon-nitrogen hydrolase"
                     /protein_id="HWX73179.1"
                     /translation="MERFINVAGAQTGPIARDESRQQVVSRLLELMREAKARGSDIVV
                     FPELALTTFFPRWWMEDDAEIDSFFEREMPSAATRPLFEAAQSLGIGFYLGYAELAKE
                     NGATH"
     gene            complement(395..1396)
                     /locus_tag="VNY79_11810"
     CDS             complement(395..1396)
                     /locus_tag="VNY79_11810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012456062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxoglutarate and iron-dependent oxygenase
                     domain-containing protein"
                     /protein_id="HWX73180.1"
                     /translation="MDSIPVVDIAPFAEGGARDREAVARQVDSACSSLGFLIISGHGV
                     ADRLIDDMRGVSLAYFDRPLEEKLKLRMPPDRYRGYIALGSEALSYSLDQESPPDFKE
                     SFSIGPVDFPDDDYHRAAAPGKFFAANLWPESLRDFRPVWETYYREMERVATALMRIF
                     AVGLGMDQHYFDDKIDRHITNFSVLHYPEQPKEPLPGQLRAGAHTDYGSLTILKPDNA
                     PGGLQVLNKDGQWIDVPTLPGTFVVNLGDLMAEWTNNRWVSTLHRVVNPPRDKASGSR
                     RLSMAFFHQPNYDALIECLPTCCGADRPPRYGRTTSGEHVWMKINKHRTPELVPAKA"
     gene            complement(1472..2587)
                     /locus_tag="VNY79_11815"
     CDS             complement(1472..2587)
                     /locus_tag="VNY79_11815"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73181.1"
                     /translation="MSEYDVVLEHVSKTFPGAARAVIDFNAELRHGEFIAMLGPSGCG
                     KTTTLRMIGGLEEATAGKIFVAGKDVTDLPPALRDTSMMFQSFALFPHRTVFQNVEFS
                     LKMKGMEKIARDRRVWEMLEMVGLASFAERRPRDLSGGQQQRVALARALISRPTVLLL
                     DEPLGSLDFNLRQAMMIELKKVQQELNITFIMVTHSQQEALSLADKVIVMSDAVIQQI
                     GTSREVHETPRTKFVAEFIGNNNLFQGRIRSRSGSIVFVESLGQLLYIKVPPGVRHVP
                     IGKEVWFSVRADLMNTGDKQDMANRVEGKYIASEFLGSLETDVFEVAPGHYVHVEQHR
                     HAQDRIYKRGAREMLCWPAEAGILLEDSRRPETLDAA"
     gene            complement(2600..5362)
                     /locus_tag="VNY79_11820"
     CDS             complement(2600..5362)
                     /locus_tag="VNY79_11820"
                     /inference="COORDINATES: protein motif:HMM:NF013324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SPFH domain-containing protein"
                     /protein_id="HWX73182.1"
                     /translation="MLELVITLFVIAVILVAIFYIVSIWIYKRAPSNMGFIRTGFLGT
                     KVCLGKGAIVLPVFHEITWVSLETIKLAVSRAREQAILTSDNIRIDVNAELYAHVGHT
                     EAAVLTASRTLGEKTFDADKVRNLLEAKVVGALRSFAATKTLKQLHENRDGFAREIKE
                     SVSESFVANGLVLEEVTIVALEQSTKEYFRSDNVFDAEGLKVITEITSEARRKVHTTE
                     KQTTVAIRQKDLTTQLELLEIERQEAVARASQDKEVANEQAKQLREKQTFVLDQRLAV
                     EQKELENEKTLEQLRTERDIAVTAEAKRREIVQVQKELALEQERIQRSLAIEKAEKDR
                     EIELIDKAREAEIAEISRNLARERAQRDKDIDLAAKERERQEAEIARATAVAAAEERA
                     RDQRHMASEETALAVRRRSLETRLGILDVDRDEAVAAAKQEKEISDERARILSEQQRY
                     VLDRRWEVEQEEIRKQQALEAAQIQKDVAIIEEAKRREAAEIRRALARSQEERDREIA
                     LVAKAEELERAEIRRVLAREQEDRERQIALVAKDAELQQAEVRSALATQLEELNRDIA
                     LIGKEGERERTDIERFLGREQAERDREIALVGKTRELESAEVKRLAATAERERAEHGA
                     ESVRIVADAERGRQIEIIDAGKAAESRRIDEESKAAVTRMHMITQSETRKAAAQLEAE
                     ATLIRARASTEAQKIGAEGLEREAGARGRAEMEVETLRIANTQRLLEAEATGLEAKAE
                     ALKKYNDAATFLELAKLRIEAERDVHIDQAKAMGSALSQAQIRMYGGGDGTMDTIRGL
                     FTQGFGIGEVLEGIAQSIPEGLRQRLSANGIQGLLGRPYNGGSLKQTYEHLNALVQEH
                     LRTKKAREVPFPEAIARLGEHAGANEDLRQAVKVLAEFNQEGALNDVPFDSVWNMLNA
                     VAKAAG"
     gene            complement(5417..7732)
                     /locus_tag="VNY79_11825"
     CDS             complement(5417..7732)
                     /locus_tag="VNY79_11825"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HWX73183.1"
                     /translation="MANLSPLSTNVTFDDLLEANRKQFDLIFSAQTKELGLVGSTHRP
                     PTAADLDSASLSSQPRGEASDLYAMLNGRFGSRWSSEVVEHKAERGAVTVLCKLTVDG
                     AAKMQFGSARANGDEGAALRRATEAALRNCADMFGDEAAVEARAPAPAAARPAGARPS
                     GAARAREAAAPAPGESRRLDTVALDLIENALRNARYEMDAVLFRSAMSPVIREQHDEF
                     PMITDPKGRMIVGQFGSYVNEMLAENKFDLEPGDVILQSDPYKCGGAISHINDWMVLV
                     PVFHEGELVGFTSMFGHLMDVGGWVPGSMPTDATSIFGEGIRIPPLLLYKRGELNKAV
                     LDLIMNNTRTPEMNYSDLMAIIAGCRAGEKRVIEICNRFGRDTYKQACEALLERTNRA
                     MRKLIVQNLPEEPKSFEDYVDDDGRGNGPFKMKLTVWREGDHAFFDWTGTSPQAPGPI
                     NFYLHEGMFKMFIGVYMIMVFDPQILFNDGFYDLIHVTLPKGSLLHPDFPAALGSRTH
                     ALSRQFDVLGGALSYNAPEMATAAGYGSSPHFLYSGVDKSGRPFQLMEILYGGIPGRP
                     IGDGMDGHSWWPLFQNIPSEYLETYYPMLVEGYSTIMDTGGAGKHRGGNGVEKIYLLL
                     EEGDVSIHDDRHQSQPWGILGGRPGACSEKWLVRKDGTRQPVPSKVDSVRVRAGDRVL
                     FRTAGGGGWGDPLERDIKRTRDDVARRLMSETKAREEYGVVLTGSGLDIDRRATEEMR
                     DSMRRNRKTPKLFDFGERKGNASMTRAAHAG"
     gene            complement(7752..9806)
                     /locus_tag="VNY79_11830"
     CDS             complement(7752..9806)
                     /locus_tag="VNY79_11830"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HWX73184.1"
                     /translation="MSSRLGIDVGGTFTDLLLFDESSGAMRLLKTPSTPSDQSVGILE
                     GIQQLVAETGITASSVAALLHGTTVSTNIVLEAKGAKVGLLVTENFEQVLHLARSQTP
                     GPLAGWIIMQKPDPLADLELTRGIRERINARGEVVTPLDEGSARRAVRELIELGAESI
                     TVSLLHSYANPQHEQRVKAIVEEIDAGMPVSLSSEILPEFREYERALVTVMNAYVRPS
                     MRRYLSGFEEKLHRVQFQPSVNIVRSDGGLMSVERASQSPVHTMLSGPAGGVSGAAFM
                     ASLAGYPQALGFDMGGTSTDVSLIQDGKPTISRQTTIGYYPIKVPSVDVHSVGAGGGS
                     IAHVPMTGALRVGPESAGAVPGPACYGKGGDRPTVTDANVVLGRLPPRLLGGKMVLDT
                     KAAEEAVGKIARSLSLDLHHAAQGILDIVNENMFGALRLVTVQKGLDPRDFALVAFGG
                     AGPMHGNAMAMLAGCYPAIVPPTPGVLSALGFLYSDVKNEFGQTFVRNIDDADLGQVG
                     EILARLGREARVWLREEGIEEGRQRLRYEADVRYFRQGYEFSLEIDPDRLGSGGLNDL
                     AGRFGLAHERIYGFKLDQPVELVNLRAVGVGAVQKIDLPKFEKEGADAAAAVVEQHRA
                     YFDGSFSSVNVYDRTRLRAGNRVRGPAIVVQMDATTVIHPSHTGEVDEYLNILIKPDK
                     AS"
     gene            10079..10582
                     /locus_tag="VNY79_11835"
     CDS             10079..10582
                     /locus_tag="VNY79_11835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73185.1"
                     /translation="MAEDTTRQQQLWIGVVAVIIVLIFLYFYRPFETYLVAHIPLIHF
                     SNVVFWFASLVGIAVYAIAHWQSFHNEIFRNVSELNVDTLVFDTLQAAILAIVIFCAG
                     ATLQAIETLGEYFVNRGPIFDSAFGEKLLAIFLLIILAVIFYLLHYVVRALRTGWRPQ
                     SAPPRAR"
     gene            complement(10614..11681)
                     /locus_tag="VNY79_11840"
     CDS             complement(10614..11681)
                     /locus_tag="VNY79_11840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012654167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HWX73186.1"
                     /translation="MTSYGDLTAVNIITGFLGSGKTTLLQRLLRSPQLSDVLVLVNEF
                     GEIGLDHHLLQGVAESTLLLENGCLCCAVRGDLQKALREQLSRRTRGEVPHFRRVVIE
                     TSGLADPAPIAYTLLSEAVLRHHFRLSGIVTTVDAVNGAAQIGGFPEAAKQVAMADRM
                     VLTKTDLCDGQLVAALRARLRALNVSALILDTSEIGGAPHRLLTDDIYDAEGKFREAS
                     HWTAEEIGEHANGPHDHTEAVQSFVVTFDRPLDWTAFGVWASMLLHRHGADVLRLKGL
                     LNVAGVPTPVLINGVQHIVHPPSHLEQWPDADRRSRLIFIVHGLQRGRIERSLAVFND
                     LVNAPAASPAGSAAHATAKRA"
     gene            complement(11678..12022)
                     /locus_tag="VNY79_11845"
     CDS             complement(11678..12022)
                     /locus_tag="VNY79_11845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018181375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73187.1"
                     /translation="MCALCGVLGGKGHWSDSASATAAFAGRAEPQTRLRERQARTRLL
                     NVVLKHYGVVVSDWSGNAYLLSSRTGRTAIVETISEIWSAAERLGGRICDPLDEGYLA
                     KLADGAGSTQAR"
     gene            complement(12042..13097)
                     /locus_tag="VNY79_11850"
     CDS             complement(12042..13097)
                     /locus_tag="VNY79_11850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015343751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide deacetylase"
                     /protein_id="HWX73188.1"
                     /translation="MTDDNRTRPPSGAARAGYAPRYQPRSLVPSRTAQSVRSARSSPR
                     TGGGGKKEIFCAIGVDVDAVAGWLGSYGGENSPCDISRGLFAGEIGVPRLVKLFDRLG
                     IRTSWFIPGHSIDTFPTQCKMVVDAGHEIGMHGYSHENPIAMTPEQEEAVMDRCIELI
                     ERISGRRPTGYVAPWWEFSTVTNELLLKRGIKYDHSLMNDDFHPFYVRVGDSWTPIDY
                     SKHPNEWMRPLVRGEETDLIDIPGSWYLDDLPPMMFIKSAPNSHGFIKPRDIEELWCD
                     QFDWVYREYDYAVFTMTIHPDVSGRPQVLLMLERMYDYISKHAGVKFCTFDEIADDFR
                     RRCPRQSAPVAEAARAR"
     gene            13336..>13703
                     /locus_tag="VNY79_11855"
     CDS             13336..>13703
                     /locus_tag="VNY79_11855"
                     /inference="COORDINATES: protein motif:HMM:NF013053.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismatase family protein"
                     /protein_id="HWX73189.1"
                     /translation="MNDWQNGTRADYERKGFAGRSGYGKSPVLLVVDFINGFTDPSTP
                     LGGNFAWEINATRQLQEAFRRGRLPIIYTTIGYAPDLRDGGIFVKKVPSLAILQKGSP
                     LVEVDQRIRPAPGERVIEKK"
BASE COUNT         2162 a         4534 c         4473 g         2534 t
ORIGIN      
        1 gtgggtcgcg ccgttctctt tcgccagttc ggcatagccg agataaaagc cgatgccgag
       61 cgattgcgcg gcctcgaaca gcggccgcgt cgccgcgctc ggcatttcgc gctcgaagaa
      121 gctgtcgatc tcggcgtcgt cttccatcca ccagcgcgga aagaaggtag tcagggcgag
      181 ttccgggaag accacgatgt cgctgccgcg cgccttggcc tcgcgcatga gctcgagcag
      241 ccgcgatacc acctgctggc gcgattcgtc gcgggcgatg ggcccagtct gggcaccggc
      301 gacgttgatg aagcgttcca tggcgcacct ctcgtttcag cccacggcac aatcgacctg
      361 acgttcgtgg ctcaccctga cgtcgatggg ccggtcacgc cttcgccggc acaagctcgg
      421 gggtgcgatg cttgttgatt ttcatccaca catgttcgcc ggaagtcgtg cggccatagc
      481 gcggcgggcg gtcggcaccg cagcaggtcg gcaggcattc gatcaaggcg tcataattgg
      541 gttgatggaa gaacgccatc gacagccggc ggctgcccga cgccttgtcg cgcggcggat
      601 tgaccacgcg gtgcagagta gaaacccagc gattgttggt ccactcggcc ataaggtcgc
      661 cgaggttgac cacgaaggta ccgggcagcg tcggcacgtc gatccattgg ccgtccttgt
      721 tcaacacctg cagaccgccc ggcgcgttgt cgggcttcag tatggtaagg ctgccatagt
      781 cagtgtgcgc acccgcgcgc aactgtccgg gcagcggctc ctttggctgc tcggggtagt
      841 gcaggacgct gaagttggtt atgtggcggt cgattttgtc gtcgaagtag tgctggtcca
      901 tgccaaggcc gacggcaaaa atgcgcatca gcgccgtcgc cacgcgctcc atctcgcggt
      961 agtaggtctc ccagaccggc cgaaagtcgc gcagagattc cggccacagg ttggcggcga
     1021 agaactttcc cggcgccgcg gcgcggtggt agtcgtcatc gggaaagtcg accgggccaa
     1081 tggaaaaaga ttccttgaag tccggcggcg attcctggtc cagcgaataa gacagggctt
     1141 cgcttccgag cgcgatgtaa ccgcgatagc ggtccggcgg catccgcagc ttcagctttt
     1201 cctccagcgg ccgatcgaaa taggccagcg ataccccgcg catgtcgtcg atgaggcgat
     1261 cggccacgcc atgtcccgag atgatcagga agccgaggct ggagcaggcg ctgtctactt
     1321 gacgcgccac ggcttcccgg tcccttgcac cgccttctgc gaacggcgcg atgtcaacga
     1381 ccgggatgct gtccatttcg cctactccgc tgcggcccaa tcctcgaaat aacccgaaac
     1441 gccttagccc gcgcgccgcg agcacggatc gctaggccgc atcaagcgtc tctggccggc
     1501 gcgaatcctc aagcagaata ccggcctcgg cgggccagca cagcatttcg cgggcgcccc
     1561 tcttgtagat gcggtcctgc gcgtgccggt gctgctcgac gtggacgtaa tgccccggcg
     1621 ccacctcgaa cacgtcggtc tcgagcgagc cgagaaactc gctggcgata tacttgcctt
     1681 cgacgcggtt ggccatgtcc tgcttgtcgc cggtgttcat caagtcggcg cgcaccgaaa
     1741 accacacttc cttgccgatc ggcacgtggc gcacgcccgg cggcaccttg atgtagagca
     1801 gctggccgag cgattcgacg aacacgatcg agccgctgcg cgagcggatg cggccttgga
     1861 acagattgtt gttgccgatg aactcggcca cgaacttggt gcgcggggtc tcgtggacct
     1921 cgcgcgaggt gccgatctgc tggatgacgg cgtcgctcat gacgatgacc ttgtcggcga
     1981 gcgacagcgc ttcctgctgc gaatgggtga ccatgatgaa ggtgatgttc agctcctgct
     2041 gcaccttctt gagctcgatc atcatcgcct ggcgcaggtt gaaatcgagc gagccgagcg
     2101 gctcgtcgag cagcagcacg gtcggccggc tgatgagggc gcgggcgagc gcgacgcgct
     2161 gctgctggcc gccggagagg tcgcgcggcc gccgctcggc gaagctcgcg agcccgacca
     2221 tttccagcat ctcccagacg cggcggtcgc gggcgatctt ctccatgccc ttcatcttca
     2281 ggctgaactc gacgttctga aacaccgtgc ggtggggaaa gagcgcgaag ctctggaaca
     2341 tcatcgaggt gtcgcgtagc gccggcggca ggtcggtgac gtccttgccg gcgacgaaga
     2401 tcttgcccgc cgtcgcctcc tcgaggccgc cgatcatgcg caaggtcgtg gtcttgccgc
     2461 agcccgacgg cccgagcatg gcgatgaatt cgccgtgcct gagctcggcg ttgaagtcga
     2521 tcacggcgcg ggcggcgccg ggaaaggtct tggaaacgtg ctccaggacg acgtcgtact
     2581 cgctcatagc cgagccgcgt cagcccgccg ccttggcgac ggcattgagc atgttccaga
     2641 ccgagtcgaa gggcacgtcg ttgagcgcgc cttcctggtt gaactcggcc agcaccttga
     2701 ccgcctggcg caagtcctcg ttcgcgccgg catgctcgcc gagccgcgcg atcgcctcgg
     2761 ggaatggcac ttcccgcgcc ttcttggtgc gcagatgctc ctgcaccagc gcgttgaggt
     2821 gctcgtaggt ctgcttcagc gagccgccgt tgtacggccg gccgagcagg ccctggatgc
     2881 cgttggcgct gagccgctgc cgcagcccct cggggatcga ttgcgcaatg ccttcgagga
     2941 cctcgccgat gccgaagccc tgggtaaaca ggccgcgaat ggtgtccatg gtgccgtcgc
     3001 cgccgccata catgcggatc tgcgcctgcg acagcgcgct gcccatcgcc ttcgcctgat
     3061 cgatgtgaac gtcgcgctcg gcctcaatcc gcagtttcgc caactcgagg aaggtcgcgg
     3121 cgtcgttgta cttcttgagc gcttcggcct tggcttcgag gccggtcgcc tcggcctcca
     3181 agagccgctg cgtgttggcg atacgcagcg tctcgacctc catctcggcg cgcccgcgcg
     3241 cgccggcctc gcgctcgagg ccttcggcgc cgatcttctg cgcctcggtc gaggcacggg
     3301 cgcggatcaa ggtcgcctcg gcttccagtt gcgccgcggc cttgcgcgtc tccgactgcg
     3361 tgatcatgtg catgcgcgtg accgcggcct tgctctcctc gtcgatgcgc cgcgactcgg
     3421 cggccttgcc ggcatcgatg atctcgatct ggcgcccgcg ctccgcgtcc gccacgatgc
     3481 gcactgactc ggcgccatgc tcggcgcgtt cgcgctccgc ggtcgccgcc aggcgcttga
     3541 cttcggccga ctcgagctcg cgggtcttgc cgacaagcgc gatctcacgg tcgcgctcgg
     3601 cctgctcgcg gccgaggaag cgctcgatat cggtgcgctc gcgctcgccc tccttgccga
     3661 tcagcgcgat gtcgcggttg agttcctcga gctgggtggc caacgcgctg cgcacctcgg
     3721 cctgttgcag ctccgcatcc ttggcgacga gggcgatctg ccgctcgcgg tcctcctgct
     3781 cgcgcgccag cacgcggcgg atctcggcgc gctccagctc ctcggccttg gcgacgagcg
     3841 cgatctcgcg gtcgcgctcc tcctgcgagc gggcgagcgc gcggcggatt tccgcggcct
     3901 cgcggcgctt cgcttcctcg atgatggcga cgtctttctg gatctgcgcc gcttcgagcg
     3961 cctgctgctt gcggatctcc tcctgctcga cctcccagcg ccggtcgagc acgtaacgct
     4021 gctgctcgct caggatgcgc gcgcgctcgt cggaaatctc cttctcctgc ttggcggcgg
     4081 cgaccgcttc gtcgcgatcg acatccagga tgccgaggcg ggtctcgagg ctgcgccggc
     4141 gcaccgcaag cgcggtttcc tcgctcgcca tgtggcgctg atcgcgcgcg cgctcttcgg
     4201 ccgcggcgac tgcagtcgcg cgcgcgatct cggcctcctg ccgctcgcgc tccttggcgg
     4261 cgagatcgat gtccttgtcg cgttgggcgc gctcgcgcgc gaggttgcgg ctgatttcgg
     4321 cgatttccgc ctcgcgcgcc ttgtcgatca gctcgatctc gcggtccttc tccgccttct
     4381 cgatcgccag actgcgctgg atgcgctcct gctcgagcgc cagctccttc tgcacctgca
     4441 cgatctcgcg ccgcttcgct tcggcggtga cggcgatgtc gcgctcggtg cgcaactgct
     4501 cgagcgtctt ctcgttctcg agctccttct gctcgacggc gaggcgctgg tcgagcacga
     4561 aggtctgctt ctcgcgcagc tgcttggcct gctcgttggc gacctccttg tcctggctgg
     4621 cgcgcgccac cgcctcctgg cgttcgatct ccaggagttc gagctgggtg gtgaggtcct
     4681 tctggcggat cgcgaccgtg gtctgcttct cggtggtgtg caccttgcgc cgcgcctccg
     4741 aggtgatctc ggtgatgacc ttgagacctt cggcatcgaa cacgttgtcg gagcggaaat
     4801 actccttggt cgactgctcc agcgcgacga tggtcacctc ctcgagcacc aggccgttgg
     4861 cgacgaagct ttcgctgacg ctctccttga tctcgcgggc aaacccatcg cggttctcat
     4921 gcagctgctt gagcgtcttg gtggcggcaa agctgcgcag cgcgccgacc accttcgctt
     4981 cgagcaggtt gcgcaccttg tcggcatcga acgtcttttc gccgagcgtg cggctggcgg
     5041 tgaggaccgc cgcctcggtg tggccgacgt gcgcgtacaa ttccgcgttt acgtcgatgc
     5101 ggatgttgtc ggacgtgagt atcgcctgtt cgcgcgcccg gctgaccgcg agcttgatcg
     5161 tctccagcga gacccaggtg atctcgtgaa agaccggaag cacgatggcg cccttgccca
     5221 ggcacacttt ggtgccgagg aagccggtgc ggatgaagcc catgttggag ggcgctcgct
     5281 tgtagatcca gatcgagacg atatagaaga tcgcgacaag gatcaccgcg atgacgaaca
     5341 gagtgattac gagctcaagc atcgtgcact agtcccattt gtccaagctc ttgcattgcc
     5401 agctgccgct ggtcactcat cccgcgtgag cggcgcgggt cattgacgcg ttgcctttgc
     5461 gctcgccgaa atcgaacagc ttcggggtct tgcgattgcg gcgcatgctg tcgcgcattt
     5521 cctcggtggc gcggcggtcg atgtcgagac cgctaccggt gaggaccacg ccatattcct
     5581 cgcgcgcttt cgtttcgctc atcagccggc gcgcgacatc gtcgcgggtg cgcttgatgt
     5641 cgcgctcgag cggatcgccc cagccgccgc cgccggcggt gcggaagagg acgcggtcgc
     5701 cggcgcgcac gcgcacactg tcgaccttgg acggcaccgg ctggcgcgtg ccgtccttgc
     5761 gcaccagcca tttctccgag caggcgccgg gccggccgcc gagaatgccc cagggctgcg
     5821 actggtgccg gtcgtcgtgg atcgagacgt cgccttcttc gagcagcaga tagatttttt
     5881 ccacgccgtt gccgccgcgg tgcttgccgg cgccgccggt gtccatgatc gtgctgtagc
     5941 cctcgacgag catcgggtag taggtctcga ggtattcgct cggaatgttc tggaacagcg
     6001 gccaccagga atgcccgtcc atgccgtcgc cgatcgggcg cccgggaatg ccgccataga
     6061 gaatttccat gagctggaac ggccggccgg acttgtcgac gccggaatag aggaaatgcg
     6121 ggctcgaccc gtagccggcc gccgtcgcca tttccggcgc gttgtagctc agcgccccgc
     6181 cgagcacgtc gaactgccgc gacagcgcgt gggtgcgcga gccgagggcg gccggaaagt
     6241 cgggatgcag cagcgagccc ttgggcaggg tgacgtgaat gaggtcgtag aagccgtcgt
     6301 tgaacaagat ctgggggtcg aacaccatga tcatgtagac cccgatgaac atcttgaaca
     6361 tgccttcgtg cagatagaag ttgatcggcc ccggcgcctg cggcgaggtg ccggtccaat
     6421 cgaagaaggc gtggtcgcct tcgcgccaga ccgtgagctt catcttgaac ggcccgttgc
     6481 cgcggccgtc gtcgtcgacg tagtcctcga acgacttcgg ctcctcgggc aggttctgca
     6541 cgatgagctt gcgcatggcg cgattggtgc gttcgagcag cgcctcgcag gcctgcttgt
     6601 aggtgtcgcg gccgaagcgg ttgcagatct cgatcacgcg cttctcgccg gcgcggcagc
     6661 cggcgatgat cgccatgaga tcgctgtagt tcatctccgg cgtgcgcgtg ttgttcatga
     6721 tgaggtcgag caccgccttg ttgagctcgc cgcgcttgta gagcagcagc ggcggaatgc
     6781 ggatgccctc gccgaagatc gaggtcgcgt cggtcggcat gctgcccggc acccagccgc
     6841 cgacgtccat cagatggccg aacatcgagg tgaagccgac cagctcgccc tcgtgaaaca
     6901 ctgggaccag caccatccag tcgttgatgt ggctgatggc gccgccgcat ttgtacggat
     6961 cgctctgcag gatgacgtcg ccgggctcca ggtcgaactt gttctcggcg agcatctcgt
     7021 tcacgtagga gccgaactgg ccgacgatca tccgcccctt gggatcggtg atcatcggga
     7081 actcgtcgtg ctgttcgcgg atcaccggcg acatggccga gcggaacagc accgcatcca
     7141 tctcgtagcg ggcgttgcgc aacgcgttct cgatgagatc gagcgcgacc gtatcaagcc
     7201 ggcggctttc gcccggcgcc ggggcagccg cctcgcgggc gcgggcggcc ccgctcgggc
     7261 gcgcaccggc gggacgtgcc gcggccgggg ctggcgcgcg cgcctcgacc gcagcctcgt
     7321 cgccgaacat gtcggcgcag ttgcgcagcg ccgcttcggt cgcgcgccgc agggcggcgc
     7381 cctcgtcgcc attcgcccgc gccgagccga actgcatctt cgcggcgccg tccaccgtca
     7441 gcttgcaaag tacggtcacc gcgccgcgct cggccttgtg ttcgacgact tcggacgacc
     7501 atcgcgagcc gaaacggccg ttgagcatcg cgtagagatc ggaagcctcg ccgcgcggct
     7561 gcgacgacag gctcgccgag tccagatccg ccgccgtggg cggccggtgc gtggagccga
     7621 ccagacccag ttccttcgtc tgcgccgaaa agatgagatc aaactgcttc ctgttggcct
     7681 cgagcaggtc gtcgaacgtt acattggtgc tcagcgggct taagttcgcc atcgcgtagt
     7741 ctccgcgccc ttcaggacgc cttgtcgggt ttgatcagga tattcaggta ctcgtcgact
     7801 tcgccggtgt ggctcggatg gatcacggtc gtcgcgtcca tttgcaccac gatggcgggg
     7861 ccgcggacgc gattgcccgc ccgcagccgg gtgcggtcgt acacattaac cgaagagaag
     7921 ctgccgtcga agtaggcgcg atgctgctcg acgacggcgg ccgccgcatc ggcgccctcc
     7981 ttctcgaatt tcggcagatc gatcttttgc accgctccga ccccaaccgc gcgcaggttg
     8041 acgagctcaa ccggctggtc gagcttgaac ccgtagatgc gctcgtgggc gaggccgaaa
     8101 cgaccggcga gatcgttgag cccgccactg cccagccggt cgggatcgat ctcgagggag
     8161 aattcgtagc cctggcggaa atagcgcacg tcggcctcgt agcgcaggcg ctgtcgcccc
     8221 tcctcgatcc cctcttcgcg cagccagacc cgggcctcgc ggccgagccg cgccaggatc
     8281 tcgccgacct ggccgagatc ggcgtcgtcg atgttgcgca cgaaggtttg gccaaattcg
     8341 ttcttcacgt cggaatagag gaaccccagg gcggacaaca cgccgggggt cggcggcacg
     8401 attgccggat agcatccggc gagcatcgcc atggcgttcc cgtgcatcgg gccggcgccc
     8461 ccgaatgcca ccagcgcaaa atcccgcgga tcgaggccct tctgcacggt gaccaggcgc
     8521 aacgcgccga acatgttctc gttgacgatg tcgaggatgc cttgcgccgc gtggtgcaag
     8581 tcgaggctga gcgaccgcgc gatcttcccc accgcctctt cggccgcctt ggtgtcgagc
     8641 accatcttgc cgccgaggag ccgcggcggc aggcggccca gcaccacgtt ggcatcggtg
     8701 acagtcgggc ggtcgccgcc tttgccgtag cacgccggac ccggcaccgc gccggcgctt
     8761 tccggaccga cgcgcagggc gccggtcatc ggcacgtggg caatcgagcc gccgccggcg
     8821 cccacgctgt gcacgtcgac cgacggcacc ttgatcggat aatagccgat cgtcgtctgc
     8881 cgcgagatcg tcggcttgcc gtcctggatc agcgagacgt cggtcgacgt tccgcccata
     8941 tcgaagccga gcgcctgcgg atagccggca agcgacgcca tgaaggcggc gccggaaacg
     9001 ccgcccgccg ggccggacag catggtgtgg accggcgatt ggctggcgcg ctcgacgctc
     9061 atcaggccgc cgtcggagcg cacgatgttg acgctgggct ggaactggac gcggtgcagc
     9121 ttctcctcga agccgctcag gtagcggcgc atgctcggcc ggacataggc gttcatgacg
     9181 gtgaccagcg cccgctcata ttcgcggaat tccggcagga tttccgacga cagcgacacc
     9241 ggcatgcccg catcgatctc ctcgacgatg gccttgaccc gctgctcgtg ctgcgggttg
     9301 gcatacgaat gcagcaacga cacggtgatc gattcggcgc cgagctcgat cagttcgcgc
     9361 acggcgcgcc gcgccgatcc ctcgtcgagc ggcgtgacca cctcgccgcg cgcattgatg
     9421 cgttcgcgga tgccgcgggt gagttcgagg tcggcgagcg gatcgggctt ctgcatgatg
     9481 atccacccgg ccagcggtcc gggcgtttgc gaacgcgcca ggtgcaggac ctgctcgaag
     9541 ttctcggtga ccagcaggcc gaccttggcg cccttggcct ccaacacgat gttggtcgac
     9601 acggtcgtac cgtgcagcag ggcggcgacg gacgaggcgg tgatgccggt ttctgcgacc
     9661 agttgctgga tgccttcaag aatcccgacc gattggtcgc tgggcgtcga cggcgtcttt
     9721 agcaaacgca tcgcgccgga gctctcgtcg aacagaagca ggtccgtaaa cgtcccgccg
     9781 acatcaattc cgagccggct gctcatatct ccccctgcgt tggccgtttc ggggcccttc
     9841 ttgcaccgaa gccggtacca atcctctcgt cttcactggc acagggttcg cgccttcccg
     9901 gcacgtgaag agacgcgttc tggacgccgt ctccgcgcca atagtcccgg agcagggcct
     9961 cgttgtcaac tcgttaaccg cgcgcaccgc ggcgccggaa tcgccgccgc atggaggttt
    10021 tgacatcacg atggaatgat ttaccatctt ctcaggaact caaaaccaag acgtgaacat
    10081 ggcggaagac actacccggc aacagcagtt gtggatcggt gttgttgccg tcatcatcgt
    10141 cctcatcttt ctctatttct atcgcccgtt cgagacctat ctggtcgcgc acataccgct
    10201 catccatttc agcaacgtgg ttttctggtt cgcgtcgctg gtcggcatcg ccgtctacgc
    10261 gatcgcccat tggcaatcgt tccacaacga gattttccgc aacgtcagcg aactgaacgt
    10321 cgacacgctg gtattcgaca ccctgcaggc ggcgatcctg gcgatcgtga tcttctgcgc
    10381 cggcgcgacg ctgcaggcga tcgagacttt gggcgagtat ttcgtcaacc gcggtccgat
    10441 cttcgactcc gccttcggcg agaagctcct tgccatattc ctgctgatca tcctcgcggt
    10501 gatcttctat ctgctgcact atgtcgtgcg cgccctgcgc accggctggc gcccgcaaag
    10561 tgcaccgccg cgggcgcgct gaccggctgg ccacgacgcc ccgcaagccg cgctcaagcc
    10621 cgcttcgccg tcgcgtgcgc cgccgatccg gccggcgagg ccgccggcgc attgacgaga
    10681 tcgttgaaca cggcaagtga gcgctcgatg cgcccgcgtt gcaggccgtg cacgatgaag
    10741 atgagacgcg agcggcggtc ggcgtcgggc cactgttcca ggtggctcgg cggatggacg
    10801 atgtgctgaa cgccgttgat cagcacgggc gtcggcacgc cggcgacgtt caacagaccc
    10861 ttgaggcgca gcacgtcggc gccgtgtcgg tgcagcagca tgctcgccca gacgccgaac
    10921 gccgtccaat ccagggggcg gtcgaacgtg accacgaagg attgcaccgc ctcggtgtga
    10981 tcgtgcggcc cgttcgcgtg ctcgccgatt tcctccgcgg tccagtggct cgcctcgcga
    11041 aatttgcctt ccgcgtcgta gatgtcgtcg gtgagcagac gatggggcgc gccgccgatt
    11101 tcactcgtat caaggatgag tgcggaaacg tttagcgccc gcagccgtgc gcgcagcgcc
    11161 gccactaatt gtccgtcgca caaatccgtc ttggtcagaa ccatccggtc ggccatcgct
    11221 acttgtttgg ccgcctcggg aaagccgccg atctgggccg cgccgttgac ggcgtcaacc
    11281 gtggtgacga tgccggagag acggaaatgg tggcgcagga cggcctcgga caacagcgtg
    11341 taggcgattg gcgccggatc cgccaatccg gaagtttcga tgacgacccg gcgaaaatgc
    11401 ggcacctcgc cgcgcgttcg ccgcgacagc tgctcccgca gcgccttctg cagatcgccg
    11461 cgcaccgcgc agcacaggca gccgttttcc agcaacagcg tgctttcggc gacgccctgc
    11521 agcagatgat ggtcgagccc gatctcgccg aactcgttga cgaggaccag aacgtcggac
    11581 agctgcggcg agcgcagcag acgctgcagc agcgtggttt tgccgctgcc gagaaagccg
    11641 gtgatgatgt tgaccgccgt aaggtcgccg tagcttgtca tcgtgcttgc gtcgagccag
    11701 cgccgtcggc gagcttggcc aaatagcctt cgtcgagcgg atcgcagatg cgtccgccga
    11761 gccgttccgc cgcgctccag atttcgctga ttgtctcgac aatcgcggtg cggccggtgc
    11821 ggctgctcag caaataggcg ttgcccgacc aatcgctgac cacgacgccg tagtgcttga
    11881 ggacaacgtt gagcaggcgc gtgcgcgcct ggcgctcgcg cagcctggtc tgcggctcgg
    11941 cccgaccggc aaaagccgcc gtcgcactgg cgctgtcgct ccaatgcccc ttgccgccga
    12001 gcacgccgca cagcgcgcac atgaaagccc gccctcgccg ttcagcgcgc gcgcgccgct
    12061 tcggcgacag gcgcgctctg ccgcgggcag cggcggcgga aatcgtcggc gatctcgtcg
    12121 aaggtgcaga acttcacgcc ggcatgtttg gaaatatagt cgtacatccg ctccagcatc
    12181 agcaggacct gcgggcgccc ggaaacatcg gggtggatgg tcatggtgaa caccgcgtag
    12241 tcgtactccc gatagaccca gtcgaactgg tcgcaccaga gctcttcgat gtcgcgcggc
    12301 ttgatgaagc cgtggctgtt gggcgcgctc ttgatgaaca tcatcggcgg cagatcgtcg
    12361 aggtaccagc tgccgggtat gtcgatcagg tcggtctcct cgccgcggac cagcggccgc
    12421 atccattcgt tgggatgctt cgagtagtcg atcggcgtcc agctgtcccc gacccgcacg
    12481 tagaacgggt gaaagtcgtc gttcatcagg ctgtggtcgt atttgatgcc ccttttcagc
    12541 aagagctcgt tggtgaccgt gctgaattcc caccacggcg ccacatagcc ggtcggccgc
    12601 cggccgctga tacgctcgat gagctcgatg caccgatcca tcaccgcctc ttcctgctca
    12661 ggcgtcatgg cgatcgggtt ctcgtgggaa tagccgtgca tgccgatctc gtggccggca
    12721 tcgactacca tcttgcactg cgtggggaag gtgtcgatcg agtggccggg gatgaaccag
    12781 ctggtgcgaa tgccgaggcg gtcgaacagc ttgacgagcc gcggcacgcc gatttcgccg
    12841 gcaaagaggc cgcgcgagat gtcgcaaggc gaattctcgc ccccgtacga gccgagccaa
    12901 ccggcgacgg cgtcgacgtc gacgccgatg gcgcaaaata tctccttctt gccgccaccg
    12961 cccgttcgcg gcgacgagcg cgcgctgcgt accgattgcg ccgtgcgcga cggcaccagc
    13021 gagcgtggtt gatagcgcgg cgcgtagccg gctcttgcgg ccccggaggg cggacgtgtg
    13081 cggttatcgt cggtcatgat ggtgctcggc cgcgctggat gaaacacgcg aggaaacaca
    13141 aaaaacaatc cgctcggcgg cgatcgaacg gacgcatgca acgcaacagt cccacgttgc
    13201 attcgcaccg gcaagaggta gcgccgacgg ctttcccgat gcgaccaggt acccgctgct
    13261 ggtcggagat cgttgacaag cgggcgtcgg cgacgccatc cttggtcatc ctcatcggcg
    13321 tggtggaaga aggtcatgaa cgactggcaa aacggcacgc gggcggacta cgagcgcaag
    13381 ggctttgccg gccgatccgg ctacggcaag agcccggttc tgctcgtggt cgatttcatc
    13441 aacggcttca ccgacccctc gacgccgctc ggcggcaact tcgcgtggga gatcaacgcc
    13501 acgcgccagt tgcaggaggc gttccggcgc gggaggctgc cgatcatcta cacgacgatc
    13561 ggctatgcgc cggacttgcg cgacggcggc attttcgtga agaaagtgcc ctcgctcgcc
    13621 atcctgcaga aaggttcgcc gctcgtcgag gtcgatcaga gaatacgccc ggcgcccggc
    13681 gagcgcgtca tcgagaaaaa gta
//
LOCUS       DATMQB010000415         2257 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3616730, whole genome shotgun sequence.
ACCESSION   DATMQB010000415 DATMQB010000000
VERSION     DATMQB010000415.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2257
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3616730"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..88
                     /locus_tag="VNY79_11860"
     CDS             <1..88
                     /locus_tag="VNY79_11860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016847806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HWX73190.1"
                     /translation="QSGFTRFFAANVGMAPTDYRRAAKVLRP"
     gene            284..1294
                     /locus_tag="VNY79_11865"
     CDS             284..1294
                     /locus_tag="VNY79_11865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011927610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX73191.1"
                     /translation="MNRFIERHPAWALIALVVAAVLLWLIFVVWPPGLEAAIGRKRVF
                     LNAVFNGITLGGLYFLVASGFTLIFGLMRNVNLAHGSLYLFGGYVGYAISAWTGSWIL
                     SFVVAFLAVALVGVLLQIFVFRRMEGQDLRQTMVTIGLSIVFADLMLWVFAGDFYQIQ
                     TPSWLIGPIELPLVTAVKSSGEPVYLQYPLVRLVIFAGSVVVGVAMWLALNRTRIGMI
                     VRAGVDDRDILAATGVQIQLVFVLVFALGGGLAGVAGVVGGTFQSISPGEDTRFLLAS
                     LVVVIVGGMGSIPGAALGAVIIGLAEQLGSVYIPTYAIVVTFLIMVLVLALRPQGLLA
                     RR"
     gene            1296..>2257
                     /locus_tag="VNY79_11870"
     CDS             1296..>2257
                     /locus_tag="VNY79_11870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX73192.1"
                     /translation="MSLTQGAELQANQPASAARRAIIRAWPELDNPAAWLVALILVIM
                     PLIANGFFLIEIFGTTLILGVVALSLMFLAGYGGMVSLMQLTIAGFAGYMVAVFGVSG
                     NANISLSWPWWLATPMALALATLFGTLGGALAVRTEGIYTIMITLAIGAAFYYFTNQN
                     WAIFNGHTGINTVATPQFWGVDWRSDIPFYYVTLGAAALCYFAVQYLSRAPFGLALQG
                     VRDNPRRMAALGFNVNAHRVAAYAFASFVAGLGGVLQVWNYRQISPGSVSVGACIDIL
                     IIAVVGGITRPVGPFIGAFIFVILRTFALDLLVKFGLDGNRFRL"
BASE COUNT          306 a          735 c          714 g          502 t
ORIGIN      
        1 gcagagcggg ttcacccgct tcttcgccgc caatgtcggg atggcgccga ccgattaccg
       61 ccgtgcggcc aaggtgttgc gtccctgagg ggcgcccttt ggagcgataa aagatactct
      121 cgatcaagtc cgccgctttc cgtcccgtta ggatgcccaa agcgcgatcc caaagaaggt
      181 cgcggccctc gggaggatgc acgtcgatgg caaggcatgc ggcggatttt gcggcaccgg
      241 cggtcaccgg accgggcgct gccggcgcga ccggactggt ttcgtgaaca ggttcatcga
      301 acgccacccg gcgtgggcgc tgatcgccct cgttgtggcc gcggtcctac tgtggctgat
      361 ctttgtggtc tggccgccgg ggctcgaggc cgccatcggc cgcaagcggg tctttctcaa
      421 cgctgtcttc aacggcatta cgctcggcgg gctttacttc ctggtggcga gtggcttcac
      481 cctgatcttc ggcctgatgc gcaacgtcaa tctggcccat ggctcgcttt atctgttcgg
      541 cggctacgtc ggttacgcca tcagcgcgtg gaccggttcc tggatcctca gcttcgtcgt
      601 cgcgttcctg gccgtggcgc tggtcggcgt cctcctgcag atcttcgttt tccgacgcat
      661 ggaaggccag gatctgcgtc aaaccatggt cacgatcgga ctctcgatcg tgtttgcaga
      721 cctgatgctg tgggtatttg ccggggactt ctatcagatc cagacaccga gttggctgat
      781 cggaccgatt gaactgccac tcgtcaccgc ggtgaagtcc tccggcgagc cggtctatct
      841 gcaatatccg ctggtacggc tggtgatctt cgccggctcc gtcgtggtcg gcgttgcgat
      901 gtggctcgcg ctcaatcgca cgcggatcgg catgatcgta cgcgccggcg tcgacgatcg
      961 cgacatactg gcggcgaccg gcgtgcagat acagctcgtc ttcgtgctcg tcttcgccct
     1021 cggtgggggc cttgccggcg tcgccggtgt cgtcggcggc acgttccagt cgatttcgcc
     1081 gggtgaggac acgcgcttcc tgctcgcctc gctggtggtg gtgattgtcg gcggcatggg
     1141 ctcgattcca ggtgcggcgc tcggcgccgt catcattggt ctcgccgagc aactcggctc
     1201 cgtctacatc ccgacctacg cgatcgtcgt gactttcctg atcatggtgc tggtgctggc
     1261 gctgcggccg cagggcctgc tcgcgaggcg atgacatgtc gttgacccag ggcgccgagc
     1321 ttcaagcgaa ccaacccgcc tcggcggcgc ggcgcgcgat catccgtgcc tggccggaac
     1381 tcgacaatcc cgccgcctgg ctggtcgcgc tgatccttgt gatcatgcca ctgatcgcca
     1441 acggcttctt tctgatcgag attttcggca ccacgctgat cctcggcgtc gtcgccctca
     1501 gtctgatgtt cctcgcgggc tatggcggca tggtcagcct gatgcagctc accatcgccg
     1561 gcttcgcggg ctacatggtc gcggtgttcg gcgtcagcgg caacgccaat atcagcctca
     1621 gctggccgtg gtggctcgcc accccgatgg cgctcgcgct tgcaacgctc ttcggcacgc
     1681 ttgggggcgc gctcgcggtg cgcaccgagg gcatctacac catcatgatt acgctggcga
     1741 tcggcgcggc gttctactac ttcacgaacc agaactgggc gatcttcaac ggccataccg
     1801 gaatcaacac cgtcgccacc ccgcaatttt ggggcgtcga ctggcgctcg gacattccct
     1861 tttattacgt gacgctcggc gccgcggcgc tgtgctattt cgcggtgcag tacctctcgc
     1921 gcgcgccgtt cggcctcgcg ctgcagggcg tgcgcgacaa tccccgccgc atggccgcgc
     1981 tcggctttaa tgtcaatgcg catcgagtgg cggcctatgc gttcgcgtcg ttcgttgccg
     2041 ggcttggggg agtcctgcag gtctggaact accggcagat ctcgcccggc tcggttagcg
     2101 tcggagcctg catcgacatt ttgatcattg ccgtggtcgg cggcatcacg cggccggtcg
     2161 gtcctttcat cggcgccttc atcttcgtca tcctgcgcac ctttgcgctc gacctgctgg
     2221 tcaagttcgg gctcgacggc aatcgcttcc ggctttt
//
LOCUS       DATMQB010000416         5723 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_831637, whole genome shotgun sequence.
ACCESSION   DATMQB010000416 DATMQB010000000
VERSION     DATMQB010000416.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5723)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5723)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5723
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_831637"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..416
                     /locus_tag="VNY79_11875"
     CDS             <1..416
                     /locus_tag="VNY79_11875"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=3
                     /transl_table=11
                     /product="1,4-butanediol diacrylate esterase"
                     /protein_id="HWX73193.1"
                     /translation="APDYLTFTRMLLAGGTLDGVQVLKPETVKLMGRNAIGDIEVPKL
                     RSNNPAMALEVEMFPGQVKKWGLSFIINTQDVQGGRAAKSLAWAGVHNTFFWIDINRR
                     ITAVVMMQILPAADPHVLETMVNFEQALYVARSRA"
     gene            complement(405..2336)
                     /locus_tag="VNY79_11880"
     CDS             complement(405..2336)
                     /locus_tag="VNY79_11880"
                     /inference="COORDINATES: protein motif:HMM:NF014585.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase B/oxoprolinase family protein"
                     /protein_id="HWX73194.1"
                     /translation="MLHAPSPRVLGPIELEVIHGTIRAAELEIEAAVERTSRSPMIRD
                     QHDYRVALFDARGRKLTGRSYSAIVEPVFEYFGADDIHPGDVFFWNDPYNSSGGIGHV
                     PDLCTTVPIFVGERLIGFSQVFGHHDDVGGSVPGSLPVHATDSWMEGMLIPPIKLYEK
                     GKRNEAAFRIIVRNSRLSEHLKGDLDAEQGAARLGCRRIEALAQRYGVDTLEQAFDQL
                     LQNTAAIFRREILPKIKDGVYHFEDYIEADGVDEPRLHTLRLTMTKTQDKILLDFTGT
                     DPEAKGPINWALDEAEGRYFRKWLAPTLRSLAGSPERAAEIDSNEGVLDVIEVKFPPK
                     GTLITPHFGRPTGMRFFLMLRSLGAFAACLSKATGGAMPADHETIRIWGLSGGKTQDD
                     FFLFREVLGGGGPGRPWADGSDVVHVVPNSRNLPAEFAETRYPVLVEQLGLKEDSGGP
                     GYRRGGFGYDKRIRALSEARLISNADRSVLSCYGVNGGRAGKPYAVAVTSPDGVTVSH
                     PGMCDTVIIPAGSTVRIVTTGGGGWGDPLLREIDKVVYDVECGLVSPDSARDEYGVVL
                     FKVGRKWQSDAAKTAQRRRQLAQSRGKPPMFDRGAYFEAEKRRGRIKYPEGWLDPDVG
                     WYANSVREADAGSERALGP"
     gene            complement(2349..4400)
                     /locus_tag="VNY79_11885"
     CDS             complement(2349..4400)
                     /locus_tag="VNY79_11885"
                     /inference="COORDINATES: protein motif:HMM:NF014071.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HWX73195.1"
                     /translation="MGLRIAIDTGGTFTDVVAIDEATGDIASTKTPSTPEDLSVGLIE
                     GVRKVLAAVGAGPVDVHMLLHGSTVATNAVLEHKFDGLGLLVTKGFRHLIEIARQSVP
                     DGYGNSFFWVKPHRLVPLHLVREVPGRMRFDGSVLEPLDEAVVIDAVRELVEDGVRCI
                     AVCLLHSYANDAHEKRVGEIVARHFPEVFVSLSSVVLPEYREYERAMTTLIDVLVKPF
                     CRTYLRRAAEKITAASGDIPFLIMRSNGGIVKHSTAGERPVTMLLSGPAAGVLGSVHT
                     AQLAGYRDILTIDVGGTSTDVSIIENYQPRYTSTSMVENYPVKTPMLDIVTVGAGGGS
                     IVWTDSYGQLKVGPQSAGANPGPICYSKGGTKPTVTDAAVILGRLPAALVGGEIELDA
                     RAARRAFVLLGEEVGLDPDELAAGALEVAAANQVFGIRQVTTVRGREPGDYAMVAFGG
                     AGGLFATEVADFLGINTVISPPDPGNLCAFGLHVCDVTRDYIRTLVRRQSSADADEII
                     AAWRELERLGFADIEGEGIGRDAIAVHFIGDVRYFGEGHEVQVEIPRELSGRAALDFM
                     WEEFHQVHDRTFGFNYRGQQDVELVNLRVRAVGRQDRPQLKAAEDARPPAAPFARRKV
                     YWRSTGWIDVPLFRRAELALDQHIGGPAIVEEYGATTVMPPSWSLHTDRYRNLILVSG
                     R"
     gene            complement(4479..5414)
                     /locus_tag="VNY79_11890"
     CDS             complement(4479..5414)
                     /locus_tag="VNY79_11890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012456057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX73196.1"
                     /translation="MLQFIVNWLAGTPSFAAPYALAALGLIIGERAGVLSLGAEGFML
                     VGALAGVAADLELGGYPAISLAVAMLAAAVVSLLFALLVVVLRVNQVIAGLAIVFFCQ
                     GLTSLVGTLAGWTNRAIGGLHEVAIWPLSDIPIVGRILFTQNLVVYLTVPIFFAVNNI
                     LSRSMLGLRLRSVGENPEAADAVGVSVPAYRLGAVVAGSALIGLAGGYLSVVDVKIWI
                     PDMTGGRGWIAIALVIFARWQPWRALFGALLFGCIEALIPRIAAAGIQLPQYFLLMTP
                     YLATIAVMIWAGLSKFGRSNEPAALGQPHVREERR"
     gene            complement(5429..>5723)
                     /locus_tag="VNY79_11895"
     CDS             complement(5429..>5723)
                     /locus_tag="VNY79_11895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012456058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX73197.1"
                     /translation="LSALAGFVIATAQEGRLTQSFFEGYGFSGILIAFLARNNPIAAM
                     IVAVLVAVLFVSGRSLQVFCQIPFAMVQLIQAIIVICVAASEFLMRHRLHWVR"
BASE COUNT         1090 a         1887 c         1847 g          899 t
ORIGIN      
        1 ccgctccgga ctacctcacc ttcacgcgca tgctgctcgc gggcggcacg ctcgacggcg
       61 tgcaggtgct caagccggag acggtgaagc tcatggggcg caacgccatc ggcgatatcg
      121 aggtgccgaa gctgcgcagc aacaacccgg caatggcgct cgaagtcgag atgtttcccg
      181 ggcaggtcaa gaaatggggc ttgagcttca tcatcaacac gcaggacgtc caaggcggcc
      241 gcgcggcaaa gagcctggcg tgggcgggag tccacaacac cttcttctgg atcgacatca
      301 accggcggat caccgccgtc gtcatgatgc aaattctgcc ggccgccgac ccgcatgtgc
      361 ttgagaccat ggtgaacttc gagcaggcgc tttacgtcgc gcgatcacgg gcctagcgcg
      421 cgctcgcttc cggcgtctgc ctcgcgcacg gaattggcgt accaaccgac gtccggatca
      481 agccaaccct cagggtattt gatccgccca cgccgcttct cggcctcgaa ataggcgccg
      541 cgatcgaaca tcggcggctt gccgcgcgac tgcgccagct gacggcggcg ttgcgccgtc
      601 ttggccgcat ccgactgcca cttgcggccg accttgaaga gcacgacgcc atattcgtcc
      661 ctcgcgctgt cgggagagac gaggccgcac tcgacatcgt agaccacctt gtcgatttcg
      721 cgcagcagcg gatcgcccca cccgccgccg ccggtggtga cgatgcgcac ggtcgaaccg
      781 gctgggatga tgaccgtgtc gcacatcccg ggatgactga ccgtgacgcc gtcaggcgag
      841 gtcaccgcca ccgcgtaggg cttgccggcc ctgccgccgt tgacgccgta gcagctcaga
      901 accgagcggt cggcattgga gatgaggcgc gcctcgctca gggcacgaat gcgtttgtcg
      961 tagccgaagc cgccgcgacg ataaccgggc ccgccggaat cctccttgag gcccaactgc
     1021 tcgaccagca ccgggtagcg cgtctcggcg aattcggccg ggagattgcg cgagttcggc
     1081 acgacgtgga cgacgtcgga cccgtcggcc cacggccggc cgggtccgcc gccgcccaaa
     1141 acttcgcgga acaggaagaa atcgtcctgc gtcttgccac ccgagaggcc ccaaatgcga
     1201 atcgtctcat ggtcggcggg catggcgccg ccagtcgcct tcgagagaca tgcggcgaac
     1261 gcgccgagcg accgcagcat caggaaaaag cgcatgcccg tcgggcgccc gaaatgcggc
     1321 gtgatcagcg tgcccttggg cggaaacttc acctcgatca cgtcgagcac gccctcattc
     1381 gagtcgatct cggcggcccg ttccggactg ccggcgagcg agcgcagcgt cggcgcgagc
     1441 cacttgcgaa agtagcgccc ctcagcctcg tccagcgccc agttgatcgg ccccttggcc
     1501 tccggatcgg tgccggtgaa gtccagcagg atcttgtcct gcgtcttggt catggtgagg
     1561 cgcagggtgt gcaagcgcgg ttcgtcgacg ccgtcggcct cgatgtagtc ctcgaaatga
     1621 taaacaccgt ccttgatctt cggcaggatc tcgcggcgga agatcgccgc cgtgttctgc
     1681 agaagctgat cgaaggcctg ctccagcgta tcgacgccat agcgttgcgc cagcgcctcg
     1741 atccgccggc atccgagccg ggccgcaccc tgttcggcgt cgagatcgcc cttgagatgc
     1801 tcagacagcc gcgaattgcg cacgatgatg cggaaggccg cttcattgcg cttccctttc
     1861 tcgtacagct tgattggcgg tatgagcatg ccctccatcc agctgtcggt ggcgtggacg
     1921 ggaaggctcc cgggtaccga accgccgacg tcgtcatgat ggccgaatac ctgactgaag
     1981 ccgatcagac gctcgccgac gaagatcggg acagtggtgc aaagatcggg cacgtgaccg
     2041 atgccgccgc tcgaattgta gggatcattc cagaagaaca cgtcgccggg atgaatgtcg
     2101 tcggcgccga aatattcgaa caccggctcg acgatcgccg aataggagcg gccggtgagc
     2161 ttgcggcctc tggcgtcgaa cagcgcgacg cgataatcgt gctggtcgcg gatcatcggc
     2221 gaacgcgacg tgcgctcgac cgcggcctcg atctcgagct cggcggcgcg aatggtgccg
     2281 tggatgactt caagctcgat cgggccgagc acgcggggtg acggggcatg cagcatcgcg
     2341 tgttcctctc agcgtccact gaccaggatc agattgcggt atcgatcggt gtgcagcgac
     2401 catgagggcg gcatcactgt cgtggcgccg tactcctcga cgatcgccgg tccgccaatg
     2461 tgctggtcca aggcaagctc ggcgcggcgg aacagcggta cgtcgatcca gccggtcgat
     2521 ctccaataga ccttgcgccg cgcgaaggga gcagcaggcg gacgggcgtc ctcggcagcc
     2581 ttgagctgcg gacgatcctg cctgccgaca gcacgcacgc gcaaattgac aagctcgacg
     2641 tcctgctggc cgcgatagtt gaaaccgaag gtgcggtcat gcacctggtg gaactcctcc
     2701 cacatgaaat ccagcgcggc gcggcccgac aattcgcgcg gaatttcgac ttggacctcg
     2761 tggccttcgc cgaaatagcg gacgtcgccg atgaaatgca cggcgatcgc gtcccttccg
     2821 atcccctcgc cctcgatgtc ggcgaatccg agccgttcga gctcacgcca ggccgcgatg
     2881 atctcgtcgg cgtcggctga actctgccgc ctaaccaggg tgcggatgta gtcgcgggtg
     2941 acatcgcaga cgtgcagacc gaacgcgcac agattgcccg ggtcgggcgg cgagatcacc
     3001 gtattgatgc cgagaaagtc ggcaacttcg gtagcaaaca aaccgccggc gccgccgaac
     3061 gcgaccatcg catagtcgcc gggctcgcgg ccgcggacgg tcgtcacttg gcggataccg
     3121 aacacctggt tggcggctgc gacctcgagc gcgccggccg caagttcgtc cggatcgagg
     3181 cccacttcct cgccgagcag gacgaacgcg cggcgcgcgg cgcgggcgtc gagttcgatc
     3241 tcgccgccga caagagcggc cggcagccgt ccgaggatga cggccgcatc ggtaacggtc
     3301 ggcttggtgc cgcccttgct gtagcagatc gggcccgggt tggcgccagc gctctgcggg
     3361 ccgaccttga gctggccgta cgagtcggtc cacacgatcg agccgccgcc ggcgccgacg
     3421 gtgacgatat caagcatcgg cgtcttcacc ggataattct cgaccatcga ggtcgaggtg
     3481 tagcgcggct ggtagttctc gatgatggag acgtcggtcg aggttcctcc gacgtcgatc
     3541 gtcaggatgt cgcgataacc ggcgagctgc gcggtatgta ccgagccgag cacgcccgcg
     3601 gccggtccgg acagcagcat ggtgaccggc cgctcgccgg cggtcgagtg cttcacgatc
     3661 ccgccgttcg accgcataat caggaacggg atgtcgccgg aagctgcggt aatcttctcg
     3721 gccgcgcgcc gcaggtaggt ccggcagaaa ggcttgacca gcacatcgat gagcgtcgtc
     3781 atcgcccgct cgtactcgcg atattccggc agcacgaccg aagacagcga cacgaacacc
     3841 tccggaaagt gccgcgcgac aatctcgccg acgcgcttct catgcgcgtc attcgcatag
     3901 gagtgcagca ggcagactgc aatgcagcgc acaccgtcct cgacgagttc gcgcacggca
     3961 tcgatcacca cggcctcatc gagcggttcg agcacgctgc cgtcgaagcg catccgaccc
     4021 ggcacctcgc gtaccaggtg cagcggcacc aggcggtgcg gcttcaccca gaagaacgaa
     4081 ttgccgtagc cgtcgggcac cgactggcgc gcgatctcga tcaggtggcg gaagcccttg
     4141 gtgaccagca gccccaatcc gtcgaacttg tgctcgagca ccgcgttggt agcgactgtc
     4201 gatccatgca gcagcatgtg cacgtcgacc gggccggcgc cgaccgccgc cagcaccttt
     4261 cgtaccccct cgatcaggcc gacgctgagg tcctccggcg tggagggcgt cttggtcgag
     4321 gcgatatcgc cggtcgcctc atcgatcgca acgacgtcgg tgaacgtccc gccggtatcg
     4381 atcgcgattc gcaagcccat gttcatgtcc atcatgcgga tactgtatcc gcatacgata
     4441 tattggacgc aaagcccctc ccgccgcaag cgcttccgtt atcgccgctc ctcgcgcacg
     4501 tgcggttgcc cgagcgcggc cggctcgttg gagcggccga acttcgacaa cccggcccag
     4561 atcatgaccg cgatggtggc gagatacggc gtcatcagca ggaaatactg cggcagctga
     4621 atccccgcgg cggcgatgcg cggaatgagc gcttcaatgc agccgaacaa cagcgccccg
     4681 aacagcgcgc gccatggttg ccagcgggcg aagatgacga gagcgatcgc gatccagccg
     4741 cggccgccgg tcatgtccgg gatccagatc ttgacgtcga cgacggagag atagccgccg
     4801 gcaagcccga tcagcgccga cccggcgacc accgcgccta accggtaggc cggaacgctc
     4861 acgcctacgg catcggcggc ctccggattc tccccaaccg atcgcagccg cagcccgagc
     4921 atcgagcgtg acaggatgtt gttgacggca aagaagatcg ggacggtgag gtagaccacg
     4981 agattctgcg tgaagagaat gcggccgacg atgggaatgt ccgacaacgg ccagatcgcc
     5041 acctcatgca gtccgccgat ggcgcgattg gtccagcccg caagcgtccc gaccaggctg
     5101 gtgaggccct ggcaaaagaa cacgatcgcc agtccggcaa tgacctggtt gacgcgcagc
     5161 accacaacga gaagcgcgaa cagcaacgac accacggccg cggccagcat tgcgaccgca
     5221 agcgagatcg ccggataacc gccgagctcg aggtcggcgg cgacgccggc cagcgcgcca
     5281 acgagcatga acccttcggc accgagcgag agaaccccgg cgcgctcacc gatgatcagg
     5341 ccgagtgccg ccagggcata gggcgcggca aagctcggcg taccagccaa ccagttgacg
     5401 atgaactgca acacccgttt ttctctcttc aacgcaccca gtggagccga tgccgcatca
     5461 agaactccga ggcggcgacg cagatcacga tgatcgcctg gatgagttga accatggcga
     5521 agggtatctg gcagaagacc tgcagactgc ggccgctgac gaacagcacc gccaccagca
     5581 ccgcgacgat catggcggcg atcgggttgt tgcgggcaag aaaggcgatg aggatcccgg
     5641 aaaagccgta gccctcgaag aaagactggg tgagccgtcc ctcctgggcc gtggcgatga
     5701 cgaagccggc gagcgcggat aag
//
LOCUS       DATMQB010000417         3900 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1454562, whole genome shotgun sequence.
ACCESSION   DATMQB010000417 DATMQB010000000
VERSION     DATMQB010000417.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3900)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3900)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3900
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1454562"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1554
                     /gene="recG"
                     /locus_tag="VNY79_11900"
     CDS             <1..1554
                     /gene="recG"
                     /locus_tag="VNY79_11900"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008876142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003678 - DNA helicase activity [Evidence
                     IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HWX73198.1"
                     /translation="KLAEWQDGAWLQRNAFPAFADALRSIHRPATPDDLLPDSAAWSR
                     LAYDELLAGQLALALLRAHLRKRAGRGSAAEGLLRARIVGALPYTLTPSQQRAVEDIV
                     ADLAQPHRMLRLLHGDVGSGKTLVALLAAATVIEAGRQAAFMAPTEILARQHYATIAP
                     LARAAGIRLAILTGRERGRERGEILSALAAGDIDLIVGTHALFQEEVGFHDLALAVVD
                     EQHRFGVHQRLALARKGEAVDLLVLTATPIPRTLVLSYFGDMDVSELREKPAGRQKID
                     TRALPLERLSEVIDAVKRALDQGRRVYWVCPLVEESEIVDMAAAEERYRDLQKRFGDG
                     AELVHGRMRGAEKDRAMARFAAGAARILVATTVIEVGVDVPEASVMVIEHAERFGLAQ
                     LHQLRGRIGRGSERSTCLLLYKAPLGETAKARLAILRETDDGFRIAEEDLKLRGEGDV
                     LGTRQSGVPGFHIARIEVHGAFLKAARQDAMLVLGRDPRLASAHGAALRQLLYVFARD
                     EAIRLLGAG"
     gene            complement(1532..1918)
                     /locus_tag="VNY79_11905"
     CDS             complement(1532..1918)
                     /locus_tag="VNY79_11905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HWX73199.1"
                     /translation="MNFGEAIASGFSNYVNFSSRAARSEYWYWVLFNVLAQVVTGIID
                     NAVIGMSLTTAIFSLAVLLPGIAVAARRLHDVDRTGWWLLLAFVPVVGLIVLLIWFCT
                     KGTDGPNRFGPDPLPGGGQVNPRPAV"
     gene            complement(1985..2758)
                     /locus_tag="VNY79_11910"
     CDS             complement(1985..2758)
                     /locus_tag="VNY79_11910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF502 domain-containing protein"
                     /protein_id="HWX73200.1"
                     /translation="MTNDSDQSAGFPGGGAKAGIISRVRNYFLTGLVVAGPVAVTLWL
                     IWWFVTWVDNFVRPLIPTAYRPETYLPVKVPGLGLIIAFVALTVLGFFTANLIGSRLV
                     DFGQSLLSRMPIVRPIYRTTKQIFETLFSSSESSFRRVGLVEFPAPGMWSLVFLTQSP
                     TAAIAAHLPDTEHVSAFMPCTPNPTTGFFFYVPRRDVIDLDVTVEQAMTLLISAGIIQ
                     PGAGPEAQGKLAALAETARAAQTARAAEPPPRGAATPAQ"
     gene            3019..3411
                     /locus_tag="VNY79_11915"
     CDS             3019..3411
                     /locus_tag="VNY79_11915"
                     /inference="COORDINATES: protein motif:HMM:NF024750.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Arm DNA-binding domain-containing protein"
                     /protein_id="HWX73201.1"
                     /translation="MTDKTIAALTIPAGKSELFVWDDRLAGFGIRLRGGGSQTWIYQY
                     RVGSKQHRMKIGAVGSMTAGRARSEAEDLAAKVHLGADPQHEKAESRSRITHTFGRAV
                     DDYFAFRQREWRPASLRAARRYLSGTSC"
     gene            complement(3660..>3900)
                     /locus_tag="VNY79_11920"
     CDS             complement(3660..>3900)
                     /locus_tag="VNY79_11920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73202.1"
                     /translation="IPVGGACRCGPTLIGQVSLAVGLNDTQAVLDALKYSRLAGAHEE
                     RALARSREAPSDPIDTAIAAHDGRIANRSERQDVV"
BASE COUNT          667 a         1294 c         1310 g          629 t
ORIGIN      
        1 aagctcgcgg aatggcagga cggggcctgg ctccagcgca acgcctttcc ggccttcgcc
       61 gacgcgctgc gcagtatcca ccgcccggcg acgcccgacg accttctgcc ggacagcgcg
      121 gcatggtcac ggcttgccta tgacgaattg ctcgccggcc agctcgcgct tgcgctcttg
      181 cgcgcgcatc tgcgcaagcg cgccggccgc ggcagcgccg ccgaaggcct gttacgcgca
      241 cggatcgtcg gcgccctccc ctatacgctc acgccctcgc agcaacgggc ggtcgaggac
      301 attgtcgccg acctggcgca gccgcaccgc atgttgcggc ttctccacgg cgatgtcggc
      361 tcgggcaaga ccctcgtcgc cctgctcgcc gccgcgaccg tgatcgaggc cggccgccag
      421 gcggcgttca tggcgccaac cgaaatcctg gcgcgccagc actacgctac gatcgcgccc
      481 ctcgcccgcg ccgccggcat tcgccttgcc atcctcaccg gccgcgaacg cgggcgcgag
      541 cgcggcgaga ttttgtccgc actcgcggcc ggcgacatcg accttatcgt tggtacgcac
      601 gcgctgttcc aggaggaggt gggcttccac gatctcgcgc tggccgtcgt cgacgagcag
      661 caccgcttcg gcgtgcacca gcgcctggcg ctcgcgcgca agggtgaggc ggtcgacctt
      721 ctggtgctta ccgcgacgcc gatcccgcgc acgctggtgc tcagctattt cggcgacatg
      781 gacgtttccg agctgcgcga gaagccggcc ggccggcaga agatcgacac tcgcgcgctg
      841 ccgctcgagc ggctttccga agtgatcgac gcggtcaagc gcgcgcttga tcagggccgg
      901 cgggtgtact gggtgtgccc gctggtcgaa gaatccgaga ttgtcgacat ggccgccgcc
      961 gaggagcgct accgcgacct gcagaagcgg ttcggcgacg gcgccgaact cgtccacggc
     1021 cgcatgcgcg gcgcggaaaa ggaccgcgcc atggcgcgct ttgccgccgg cgcggctcgc
     1081 atcctggtcg cgaccaccgt gatcgaagtc ggcgtcgacg tgcccgaggc gagcgtgatg
     1141 gtgatcgagc atgccgaacg cttcggcctc gcgcagctcc atcaactgcg cggccgcatc
     1201 ggccgcggct ccgagcgctc gacctgcctc ctcctctaca aggcgccgct cggcgaaacg
     1261 gcgaaggcgc ggcttgcgat cctgcgcgag accgatgatg gcttccgcat cgccgaggag
     1321 gatctgaaac tgcgtggcga aggcgacgtg ctgggcacgc ggcagagcgg cgtgcccggc
     1381 ttccacatcg cccgcatcga ggtgcacggc gcgtttctca aggcggcgcg gcaggatgcc
     1441 atgctcgtgc tcggccgcga tccacgcctc gcctccgcgc atggcgcggc gttgcggcag
     1501 cttctctatg tgttcgcgcg cgacgaggcg atcagactgc tgggcgcggg ttgacttgcc
     1561 ctccgcctgg caacggatcg gggccaaacc tgttcgggcc gtccgtgcct ttggtgcaga
     1621 accagatcag cagcacgatg aggccgacga cgggaacgaa ggccagcagc agccaccacc
     1681 cggtgcggtc cacgtcatgc agccggcggg ccgccacagc gatgcccggc aggagcacgg
     1741 cgagagagaa gatggcggtt gtcagcgaca ttccgatcac agcgttgtcg atgatccccg
     1801 tcaccacttg ggcgaggacg ttgaacaaca cccagtacca atattcggac cgggcagccc
     1861 gacttgagaa attgacatag ttggaaaatc ccgatgcgat cgcttctccg aagttcatgg
     1921 cgtcctcccg cggaaccgta cttccaagtc agaatagcag atccggggaa caaaatgctg
     1981 gtccctattg cgccggcgtg gcggcgccgc gcggcggcgg ctccgcggcg cgcgccgtct
     2041 gtgccgcgcg ggcggtttcg gcgagcgcgg cgagcttgcc ctgcgcttcg gggccggcgc
     2101 ccggctgaat gatgccggcg gagatcagga gcgtcatcgc ctgctcgacg gtaacgtcga
     2161 ggtcgatcac gtcgcgccgc ggcacgtaaa agaagaagcc ggtggtcggg ttcggcgtgc
     2221 acggcatgaa ggccgagaca tgctcggtgt cgggcagatg cgcggcaatc gcggcggtcg
     2281 gcgactgcgt cagaaacacg agcgaccaca tgcccggcgc cgggaactcg accaggccta
     2341 cccggcgaaa gctcgactcc gagctggaga acaaagtctc gaagatctgc ttggtggtgc
     2401 ggtagatcgg ccgcacgatc ggcatgcggc tcaacaggct ctggccgaaa tcgacaagcc
     2461 tgctgccgat caggttggcg gtgaagaacc cgaggaccgt gagcgccacg aaggcgatga
     2521 tcaggccgag gcccggcact ttgaccggca agtaggtctc cggccggtac gccgtcggga
     2581 tgaggggccg gacgaaattg tccacccagg tgacgaacca ccagatcagc cacagcgtca
     2641 ccgccaccgg tccggcgacg accagcccgg tgaggaaata gttgcgcacg cggctgatga
     2701 tcccggcctt ggctccgccg ccgggaaagc ctgcgctctg gtcgctgtcg ttggtcatcg
     2761 ctcccgctgg gcgtggcttg gcgcccgcgt acatctatac cgcggcgccc cggggcccaa
     2821 ggggcagcag gcggcgccaa gcgccgctat tccaccgaca tcaaacctat cgaggcgtat
     2881 gacagctttg ggaagcttta ggcttgaaaa tcccgagcct ataggcgaaa tccggtgcct
     2941 tatcgacagt ttgaggagta cagagaggga gcttcctgct tcccacgtgc ttcccaaaga
     3001 ggggcaacgg atatgcgatt gaccgacaag accatcgcgg cgctcacgat tccggcgggc
     3061 aaatcggaac tattcgtttg ggatgacagg ctcgccggat tcggcatccg ccttcgaggg
     3121 ggcggatcac agacttggat ttatcaatat cgcgttggct cgaagcagca ccgcatgaag
     3181 atcggcgcag tcggttcgat gaccgcaggg agggcgagat cggaggccga agacttggcc
     3241 gccaaagttc acctcggcgc cgatccgcag cacgagaagg ccgagtcccg ttcgcggatc
     3301 acgcacacgt tcggccgggc ggtcgatgac tactttgcgt ttcgccagcg cgagtggcgg
     3361 ccggcgtcgt tgcgcgccgc tcggcggtat ctatccggga cgagctgctg acacaagcgc
     3421 gcgataagct gaaaggcttc gacatcgccg ccgccggcgt cccggtgcgt ggcgcgggct
     3481 catcgggcag ggcgtcgcgt tcaagcacgg tcacttgttc aaggtagggc gagatcgcct
     3541 gagccgccgc cagacctccc attccggcgc cgatgacgac gccgcgcctc ccgattcggt
     3601 tcggcatcga gcccctccgg cttgggtgtc acaagtctca gacgcctgcc ataaacagat
     3661 catactacgt cttgacgttc gcttcgattg gcgatgcggc cgtcatgggc ggcgatggca
     3721 gtgtcgattg ggtcactggg cgcctccctt gagcgcgcaa gcgcccgctc ctcgtgtgcg
     3781 cccgcaagcc ggctgtattt tagggcatca aggacggcct gagtatcgtt gaggccaacc
     3841 gccaagctga cctgcccaat cagcgtggga ccgcaacggc aggcgccgcc tacgggtatt
//
LOCUS       DATMQB010000418         3570 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1749862, whole genome shotgun sequence.
ACCESSION   DATMQB010000418 DATMQB010000000
VERSION     DATMQB010000418.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3570)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3570)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3570
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1749862"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..682)
                     /locus_tag="VNY79_11925"
     CDS             complement(<1..682)
                     /locus_tag="VNY79_11925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component sensor histidine kinase"
                     /protein_id="HWX73203.1"
                     /translation="MVAAAPVRAEEAPVLALREVVVSASRSIDRHEIVTLVLILGLLF
                     FAVVTAIMLLRARVRAARQEAAADETIAALRADLDRANALLQSEPQVLVDWAAASDEP
                     SIEGDPAMVGASAPHRVLAFGSWLDAGKARAMEDAVDALRAHGEGFAMTLTTLAGSAI
                     EAQGRAVTGRAVLRLKDLSGVKRELLELAGRHEALLTEVASLRALVERLPSPVWMRDA
                     AGRLAFVNA"
     gene            complement(952..1434)
                     /gene="dut"
                     /locus_tag="VNY79_11930"
     CDS             complement(952..1434)
                     /gene="dut"
                     /locus_tag="VNY79_11930"
                     /EC_number="3.6.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012169238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0004170 - dUTP diphosphatase activity
                     [Evidence IEA];
                     GO_process: GO:0006226 - dUMP biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0046081 - dUTP catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HWX73204.1"
                     /translation="MSLQVRVVRLPHAADLPLPQYQSAQAAGLDLLAAVPADAPVELA
                     PGARAMIPTGVAIALPAGTEGQVRPRSGLAVRDGVTVLNSPGTIDADYRGELQVILVN
                     LGAEPFIVRRGMRVAQLIVAPVQRAEMVEVASLDVTGRAAGGFGSTGVVSKPAGGGGD
                     "
     gene            complement(1431..2642)
                     /gene="coaBC"
                     /locus_tag="VNY79_11935"
     CDS             complement(1431..2642)
                     /gene="coaBC"
                     /locus_tag="VNY79_11935"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011995757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004632 - phosphopantothenate--cysteine
                     ligase activity [Evidence IEA];
                     GO_function: GO:0004633 - phosphopantothenoylcysteine
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0015937 - coenzyme A biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0015939 - pantothenate metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HWX73205.1"
                     /translation="MLANRRILLIIGGGIAAYKSLDLIRRLQERGARVRCILTGAAQH
                     FVTPLAAGAFCGERAYTDLFDAQSEFDVGHIRLARDTDLIVVAPATADLMAKMAGGNA
                     ADLATAVLLATDKPILIAPAMNPHMWAAKATQRNLAQLKTDGVRIVGPNSGEMAERGE
                     AGVGRMAEPNEIVAAAAAILHGTGVLAGKRVLVTSGPTSEPIDPVRFIANRSSGKQGH
                     AIATAAAAAGAEVVLVSGSVSLPDPPGVSVVRVETAQQMLEAVENALPADVAVFAAAV
                     ADWRPRQVSGGKIKKGGSGPPTLELVENPDILATIAHRKSGRPNLVIGFAAETDDVLA
                     HAQAKLKKKGCDWILANDVSPATGIMGGDDNTVHLVSAAGVEAWPSQSKESVARMLVE
                     RIGAQLRKKKR"
     gene            complement(2651..3034)
                     /locus_tag="VNY79_11940"
     CDS             complement(2651..3034)
                     /locus_tag="VNY79_11940"
                     /inference="COORDINATES: protein motif:HMM:NF013970.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HWX73206.1"
                     /translation="MNVEGASVVLEWVDAIPKNDMFTTALNCAEIWYGIALRDEGRKK
                     RQLIRRAEEMFNEDFRGRILPFDERSALHFADITARRKRLGRRVGTLYSQIAAIARAN
                     EMTVATRNVSHFRDCDFPLVDPWAR"
BASE COUNT          580 a         1236 c         1162 g          592 t
ORIGIN      
        1 cggcgttgac gaaggcgagc cgtccggccg cgtcgcgcat ccacaccggc gacggcagcc
       61 gttcgaccag cgcgcgcagc gaggcgacct cggtgagcaa cgcttcgtgg cgcccggcaa
      121 gctccagcag ctcgcgcttg acgccgctca gatccttgag gcggagcacg gcgcgccccg
      181 tgacggcgcg gccttgcgcc tcgatcgccg aaccggcgag cgtcgtcagc gtcatcgcaa
      241 acccttcacc atgcgcacgc agtgcgtcga ccgcatcttc catcgcccgc gctttgccgg
      301 catcgagcca gctgccgaag gcgagcacgc ggtgcggcgc ggaggcgccg accatggcgg
      361 gatcgccttc gatcgagggc tcatccgacg ccgccgccca gtcgaccaga acctgcggct
      421 cggactgcag cagcgcgttg gcgcggtcta ggtcggcgcg caatgccgcg atcgtctcat
      481 cggccgcagc ttcctggcgc gccgcgcgca cccgcgcccg cagcagcatg atcgcggtaa
      541 cgacggcaaa gaagaggagg ccgaggatga ggacgagcgt cacgatctcg tgccggtcga
      601 tgctgcgcga ggcgctgacg acaacttcgc gcagagcgag caccggcgct tcttcggcac
      661 gtaccggcgc ggccgcaacc acgccaatgg ctgcgaggat tcctcgtcgc cacgggtgaa
      721 cgcagccccg gctcgtccgg aactcctccg gcatgcccct tgtgccctcc gctggccgcc
      781 accgccatca agccagccgg tcgcgggtaa gcccgcgaat catgcaactt tactctcatg
      841 gggattcgag ccaaagagtc cagatcgtga acggcgtttc gccgacggca cgccccggcg
      901 gccggcgggt aacgcgggcg attttcccca ctccccgatg ccgagtgctg ttcagtcgcc
      961 gccgccgccc gcaggcttcg acacgacgcc ggtcgagccg aagccccccg cggcgcgccc
     1021 cgtgacgtca aggcttgcaa cttcgaccat ttcggcgcgc tggacgggcg cgacgatgag
     1081 ctgcgcgacg cgcatgccgc ggcggacgat gaacggttcg gcgccgagat tgaccaggat
     1141 cacctgcaat tcgccgcggt aatcggcatc gatcgtgccg ggagaattaa gcacggtgac
     1201 gccgtcacgg acggccaggc ccgagcgcgg ccgcacttgc ccctcggtgc ccgcgggcag
     1261 tgcgatcgcg acaccggtcg gtatcatcgc gcgtgcgccg ggcgcgagct cgaccggcgc
     1321 atccgccggc accgcggcga ggagatcgag gccggcggcc tgcgcgcttt gatattgcgg
     1381 cagcggcagg tcggcggcgt gcggcagccg gacgacgcgc acctggaggc tcaccgcttc
     1441 tttttcctca gctgggcgcc gatccgctcg accagcatgc gcgcgacact ctccttcgac
     1501 tgcgatggcc atgcttcgac gccggccgcg ctgacgaggt gaaccgtgtt gtcgtcgccg
     1561 cccatgatgc cggtcgccgg cgaaacgtcg ttggcgagga tccagtcgca gcctttcttc
     1621 ttgagcttcg cctgggcgtg agcgaggacg tcatcggtct ccgccgcgaa tccaatgacg
     1681 agattcgggc ggccggactt gcggtgcgcg atcgtggcga gaatgtcggg attctccaca
     1741 agctcgagcg tcggcgggcc gctgccgcct ttcttgatct tgccgccgct cacctgccgc
     1801 ggacgccagt cggcgacggc ggcagcgaac acggcgacat cggccggcag cgcgttctcc
     1861 accgcttcca gcatctgctg cgccgtttcc acccgcacca cggaaacgcc gggcggatcg
     1921 ggcagactca ccgaaccgct gaccagcacc acctcggcgc cggcggcggc cgcggccgtg
     1981 gcgatggcgt ggccctgctt ccccgacgag cggttggcga tgaagcgcac cggatcgatc
     2041 ggctcgctgg tcggccccga agtgaccagc acgcgcttcc ctgcaagcac tcccgtcccg
     2101 tgcaaaatcg cggcggcggc ggcgacgatt tcgttcggtt cggccatccg cccgacgccg
     2161 gcttcgccgc gctcggccat ttcgccgctg ttcggcccga cgatgcgaac cccgtcggtc
     2221 ttgagctgcg ccaggttgcg ctgcgtcgcc ttcgccgccc acatgtgcgg attcatcgcc
     2281 ggcgcgatca ggatcggctt gtcggtcgcg agcaggaccg cggtggcgag gtcggcggcg
     2341 ttgccgcccg ccatcttcgc catgaggtcg gcggtcgccg gcgccacgac gataaggtcg
     2401 gtgtcgcggg cgaggcggat atggccgacg tcgaactcgc tctgcgcatc gaacaggtcg
     2461 gtataggcgc gctcgccgca gaacgcgccg gccgcgagcg gcgtcacgaa gtgctgcgcg
     2521 gcgccggtga gaatgcagcg cacccgcgcg ccgcgctcct gcagccgccg gatgaggtcg
     2581 agcgacttgt aggcggcgat gccgccgccg atgatgagca ggatgcgcct gttagccagc
     2641 atgccgctcc tcacctcgcc cacggatcca cgagcggaaa atcgcaatcg cgaaaatgcg
     2701 acacgttacg agtggcgacg gtcatttcgt tcgccctggc gatggcagcg atttgtgagt
     2761 agagagttcc aacacgccgc cccagtcttt tgcgccgagc ggtgatatca gcgaaatgca
     2821 aggccgaccg ctcatcaaac ggcaggattc gtccacgaaa atcctcgttg aacatttctt
     2881 ccgcacgcct gatgagttgc cttttcttcc gcccttcgtc cctcagtgca attccatacc
     2941 aaatttccgc gcagttaagc gccgttgtga acatgtcgtt cttgggaatg gcgtcgaccc
     3001 actcgaggac gacgctcgca ccttcgacgt tcatgagttc ggagagcaca ttcgtgtcga
     3061 gaataaatat ttatttgaat tttggcggct tgcgcacgcg ttcgcgcggc aacggttata
     3121 gcgagaggcc gccgagagac gcaaagcgcc ggcggatggc ggtgcccaat cctgcttcct
     3181 tggttgtgga cgttcgcacc gcggccgcca gcacggcgcg cctcttcccc catcgagcgg
     3241 ccgttcctgg ccgctcgcat gcggatcttg gtttttaccc gatcatcgag attgcgaata
     3301 gtcaggtttc ccatgcccac ctcatccatc tgaaattttg gcacagcctc cctagagcat
     3361 aagcattgat tgcaccgcaa tcaatgcaat catcagagca aaaacacgat ccacagcagc
     3421 agcgccgcga tgacccagag cgccgcgacc gtagagcggt tgcgccgcgc ctcggccttg
     3481 tcgatctcgg cgatggtttg cggcgacagc acgaggccgt cgcgggtgat ctcgtcgagc
     3541 tgatcgagca cgcgggcgcc gcgggtcagc
//
LOCUS       DATMQB010000419         3817 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_838539, whole genome shotgun sequence.
ACCESSION   DATMQB010000419 DATMQB010000000
VERSION     DATMQB010000419.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3817)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3817)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3817
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_838539"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VNY79_11945"
     CDS             <1..724
                     /locus_tag="VNY79_11945"
                     /inference="COORDINATES: protein motif:HMM:NF024825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="transporter substrate-binding protein"
                     /protein_id="HWX73207.1"
                     /translation="PRFYFVGSDYVYPRESNRVMRDLLRRRGCTVVGETYLDLRSKRN
                     DFGPVMRQIKNAGADVIFSTVVGYSTIYLYQAFLEAGLDARVTPIASLTTTESEVRAM
                     SFDIAAGHITAAPYFQSVSGERNDSFVKCYKARYGEDEPTNMCAEAAYFQVHLFANAL
                     AQTNSLDTDLIKQCVLGSDFDAPQGRVSVSAATSHTNLWSRVGRVDRRGQFEIMQQSE
                     MPVWADPFLVGRGAVSALAVGL"
     gene            721..1350
                     /locus_tag="VNY79_11950"
     CDS             721..1350
                     /locus_tag="VNY79_11950"
                     /inference="COORDINATES: protein motif:HMM:NF044448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ANTAR domain-containing protein"
                     /protein_id="HWX73208.1"
                     /translation="MKEPPQKVTGGGGSAREPAGAAAEISSLEILVAVPRDEEGDMLA
                     RELLRTRSGVRRLWPLPPRLPDGVDVMFCELTPELPQCLPWVPGQPLAALVVVTPAVH
                     MPPLKLLRNCAPHAVLHRPFTTGTVLTSLAVARAQFLYEQRLRARIDKLDETLRSFRS
                     VERAKNILMEKRNLDEEAAYHFMRRQAMSQRVSVGAVAAAIIDSRDILG"
     gene            1571..2611
                     /locus_tag="VNY79_11955"
     CDS             1571..2611
                     /locus_tag="VNY79_11955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004040 - amidase activity [Evidence IEA];
                     GO_process: GO:0006807 - nitrogen compound metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aliphatic amidase"
                     /protein_id="HWX73209.1"
                     /translation="MLHGDITSSNDTVGVAVVNYKMPRLHTKAEVLANARQIAEMLVG
                     MKIGLPGMDLVIFPEYSTHGIMYDSKEMYETAASVPGEETKIFADACKKAKVWGVFSL
                     TGERHEDHPNKAPYNTLILMNDKGEIVQKYRKIMPWVPIEGWYPGNCTYVSEGPKGLK
                     TSLIICDDGNYPEIWRDCAMKGAELIVRCQGYMYPAKDQQVLMAKAMAWANNVYVAVA
                     NASGFDGVYSYFGHSAIIGFDGRTLGECGEEDMGIQYAQLSKSLIRDARRNLQSQNHL
                     FKLVHRGYTGKINSREDIRGEAICPYDFYKKWITDPEGTRTMVEALTRSTVGTDECPI
                     EGIPNQKAAAHR"
     gene            2731..3528
                     /locus_tag="VNY79_11960"
     CDS             2731..3528
                     /locus_tag="VNY79_11960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CbbQ/NirQ/NorQ/GpvN family protein"
                     /protein_id="HWX73210.1"
                     /translation="MELDDFRIGEEPYYRGIGDEVRLFTAAYAERMPIMLKGPTGCGK
                     TRFVEYMAWKLERPLVTVACHEDMTASDLVGRYLLDAQGTVWHDGPLTIAVRHGAICY
                     LDEIVEARQDTTVVIHPLTDDRRVLPLEKRGELVRAHPDFQLVISYNPGYQSVLKDLK
                     ESTKQRFGAMDFGYPPTAIEAEIVAHEAKIDIAVAGKLVEIGQRSRNLKGHGLDEGAS
                     TRMLIQAGRLIAHGVSIEAACQIALVLPITDDADIRGALTAAIAASI"
     gene            3535..>3817
                     /locus_tag="VNY79_11965"
     CDS             3535..>3817
                     /locus_tag="VNY79_11965"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73211.1"
                     /translation="MARTLSEQQQTLIASLGDQPELAGTLELVWRQARASIPPALLDD
                     WVAACRTINARIGSDAAMSFIRNSPSVAATARPEAVMVLAAFAPDFARLA"
BASE COUNT          690 a         1252 c         1219 g          656 t
ORIGIN      
        1 gccgcgcttc tatttcgtcg gctcggacta tgtgtatccg cgtgaatcga accgggtgat
       61 gcgcgacctg ctgcgccggc gcggctgcac ggtggtcggc gaaacctacc tcgacctgcg
      121 ctccaagcgg aacgacttcg gtccggtcat gcggcagatc aagaacgccg gcgccgacgt
      181 gatcttctcg acggtcgttg gctactcgac gatctatctc taccaggcgt tcctcgaggc
      241 cgggctcgat gcgcgggtga cgccgattgc gagcctcacc actacggagt ccgaggtgcg
      301 cgccatgagc ttcgatatcg ccgccggcca catcaccgcg gctccctatt tccagtcggt
      361 gagcggtgag cgcaacgact ctttcgtcaa gtgctacaag gcgcgttacg gcgaggacga
      421 gccgaccaac atgtgcgcgg aggcggcata ttttcaggtg cacctcttcg ccaacgcgct
      481 ggcgcagacg aattcgctcg acaccgacct gatcaagcag tgcgtgctcg ggtctgattt
      541 cgacgcgccg caaggccgcg tctcggtcag cgctgccacc agccatacca atctgtggtc
      601 gcgcgtcggc cgcgtcgacc gccgcggcca gttcgagatc atgcagcaat cggaaatgcc
      661 ggtgtgggct gacccgtttc ttgtcggccg tggcgccgtg agcgccctgg cggtcgggct
      721 gtgaaagagc cgccgcaaaa ggtcaccggc ggcggcgggt cggcgcgaga accggccggc
      781 gccgcggccg agatatcttc cctggaaatc ctcgtcgccg tcccgcgcga cgaggaaggc
      841 gacatgctgg cgcgcgagct gttgcgcacg cgcagcggcg tgcgccgcct ctggccgctg
      901 ccgccgcgct tgccggacgg cgtcgacgtc atgttctgcg agctcacccc cgagctgccg
      961 caatgtctgc cctgggttcc ggggcagccg cttgcggcac tcgtggtggt gacgccggcg
     1021 gtgcacatgc cgccgctgaa gctcctgcgc aactgcgccc cgcacgcggt gttgcaccgg
     1081 ccgtttacca ccggaacggt gttgaccagc ctcgccgtcg cgcgcgcgca attcctctac
     1141 gagcagcggc tgcgcgcgcg catcgacaag ctcgacgaga ccctgcgctc cttccgcagc
     1201 gtcgaacgtg ccaagaacat tctcatggaa aagcgcaatc tggacgagga agctgcgtat
     1261 catttcatgc gccggcaagc catgagtcag cgcgtttccg tcggggcggt cgcggccgct
     1321 atcattgact cgcgtgacat tctcggctag cgtttttgcc tgctcctcaa cttaggggcg
     1381 cggcagcggc gccgcataaa aaatctcaat gggcaacgat gccccgctac gaccacggcc
     1441 gtggcgaagc gggctttttt gtgcttcggc actcggccgc gctggcgagt ggcgaaggca
     1501 cgagcagccg ccggccaaca agtacagcga gagggcgcga gggcgacaat ccagcgatca
     1561 ggagatccac atgcttcacg gtgatatcac cagcagtaac gacacggttg gcgtagccgt
     1621 cgtcaactac aagatgccgc gcctccacac caaggcggag gtgctggcca atgcccgtca
     1681 gatcgccgag atgctcgtcg gcatgaagat cggcctgccg ggcatggatc tggtcatctt
     1741 cccggaatac agcacgcacg gcatcatgta cgactcgaaa gagatgtacg agaccgccgc
     1801 gagcgtgccc ggcgaggaga ccaagatctt cgccgacgcc tgcaagaagg cgaaggtgtg
     1861 gggcgtgttc tcgttgaccg gcgagcgtca cgaggatcac ccgaacaagg cgccctacaa
     1921 cacgctgatc ctgatgaacg acaagggtga gatcgttcag aagtatcgca agatcatgcc
     1981 gtgggtgccg attgaaggct ggtatccggg caattgcacc tacgtctcgg aagggccgaa
     2041 ggggctcaag accagcctca tcatctgcga tgacggcaac tatcccgaga tctggcgcga
     2101 ctgcgccatg aagggcgccg agctcatcgt gcgctgccag ggttacatgt atccggccaa
     2161 ggaccagcag gtgctcatgg ccaaggccat ggcctgggcc aacaacgtct atgtcgcggt
     2221 cgcgaacgcc tccggcttcg acggcgtcta ctcctacttc ggccactcgg cgatcatcgg
     2281 cttcgacggc cggacgctcg gcgaatgcgg cgaggaggac atgggcattc aatacgccca
     2341 gctgtcgaaa tcgctgatcc gcgatgcgcg ccgcaatctc cagtcgcaaa accacctgtt
     2401 caagctggtg caccgcggct acaccggcaa gatcaattcc cgcgaggaca tccgcggcga
     2461 ggcgatctgc ccgtacgact tctacaagaa gtggatcacc gatcccgaag gtacccgcac
     2521 catggtcgag gcgctcacgc gttcgaccgt cggcaccgac gaatgcccga tcgaaggcat
     2581 tccgaatcag aaggcggcag cccatcgctg acgcggccgc gctttagagg cagcggcgcc
     2641 ttccttccgc ctctcgaccc tccctcgcct ccgggggagg ggccggaggt cgcgacaacg
     2701 gcgcccgctt gttctatagg ttccagcaga atggagctcg acgacttcag gatcggcgag
     2761 gagccgtatt accgcggcat cggcgatgaa gtgcgcctgt tcacggcggc ttatgccgag
     2821 cgcatgccga tcatgctcaa ggggccgacc ggctgcggca agacgcggtt cgtcgagtac
     2881 atggcctgga agctcgagcg cccgctggtg acggtcgcct gccacgagga catgaccgca
     2941 tccgatctgg tcgggcgcta cctgctcgac gcccagggca ccgtctggca tgacggtccg
     3001 ctcacgatcg cggtgcgcca cggcgccatc tgctatctcg atgaaatcgt cgaggcccgg
     3061 caggacacga ccgtcgtcat ccatccgctc accgacgacc gccgcgtgct gccgctggag
     3121 aagcgcggcg agctcgtgcg cgcccatccc gatttccagc tcgtcatctc ctacaacccc
     3181 ggctaccaga gcgttctcaa ggatctcaag gaatcgacca agcagcgctt cggtgcgatg
     3241 gacttcggct atccgccgac cgcgatcgaa gcggagatcg tcgcccacga ggcgaaaatc
     3301 gatattgcgg tggcgggaaa gctcgtggaa attggccaac gctcgcgcaa tctcaagggc
     3361 cacgggctcg acgagggcgc gtcgacccgc atgctgatcc aggcgggacg gctgattgct
     3421 catggcgtct cgatcgaggc tgcatgccag atcgcgctag tgctgccgat caccgacgac
     3481 gccgatatcc ggggggcgct gacggccgcg atcgccgcct cgatctaacg gtctatggcc
     3541 cggaccctct cagaacagca gcaaacgctg attgcgtctc tcggcgacca gccggagctt
     3601 gccggcacgc tggaattggt gtggcgacag gcgagggcga gcatcccgcc tgcgctgctg
     3661 gacgattggg tggcggcatg ccgcaccatc aacgcgcgca tcggttccga cgcggccatg
     3721 agcttcattc gtaattcccc gtccgtcgcc gccactgccc ggcccgaggc ggtgatggtg
     3781 cttgcggcgt ttgctcccga tttcgcccgt ttggcgg
//
LOCUS       DATMQB010000420         2562 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_505548, whole genome shotgun sequence.
ACCESSION   DATMQB010000420 DATMQB010000000
VERSION     DATMQB010000420.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2562)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2562)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2562
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_505548"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1296
                     /gene="ligA"
                     /locus_tag="VNY79_11970"
     CDS             <1..1296
                     /gene="ligA"
                     /locus_tag="VNY79_11970"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018640928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0003911 - DNA ligase (NAD+) activity
                     [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HWX73212.1"
                     /translation="ALLKFHSEIEAQRSTLDYDIDGVVYKVDRIDWQERLGFVSRTPR
                     WAIAHKFPAEQATTVVKEIEIQIGRTGALTPVAKLEPVTVGGVVVQNATLHNEEEIKR
                     LDVRKGDTVTIQRAGDVIPQVLDVVLEKRLLDAKPYKFPTKCPCPLHTDVVRETIAGG
                     AEGARARCTGEFACPYQALGHLEHFVSRRAFDIDGLGEKQIAFFYEQGWVKEPADIFT
                     LRERNGKLVLQGTDDKIRLEDVEGFGETSVRNLFSAIEARREITLERFIYSLGIRHVG
                     ETTAVALARGYGSWNAFHDACLRLARGNAEAEEEMDALDQIGDTVIESLRTYFGEAHN
                     RRRIERLAAQVRVRDAEKPRADSPIAGKTVVFTGTLEKMTRDEAKASAERLGAKVSGS
                     VSKKTDYVVAGPGAGSKLAEAKKLGVAVLTEDEWAKLIR"
     gene            complement(1446..>2562)
                     /locus_tag="VNY79_11975"
     CDS             complement(1446..>2562)
                     /locus_tag="VNY79_11975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011663550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0004177 - aminopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0070006 - metalloaminopeptidase activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="aminopeptidase family protein P"
                     /protein_id="HWX73213.1"
                     /translation="LYVDGRKFGNDVRHRLEELADVRASAEFEHGLAALGGERRKVRL
                     DPSATPEAIARLLAESGGTILRGGDPIAPMKAVKNAAEIAGAHTAQLRDGAAVTRFLA
                     WFDREAPAGRLTEIDAVEALESFRRDTGLLKDVSFPTIAGAGANGAVVHYRVTRRSNR
                     SIAPGELFLIDSGAQYEDGTTDITRTIAVGAPGAEMRGNFTRVLKGHIAIARAVFPEG
                     TTGAQLDSFARQYLWQAGLDFDHGTGHGVGSYLSVHEGPARISKLGSAALKRGMILSN
                     EPGYYRTGAYGIRIENLVLVVEAPPVAGAEKPLNAFETLTLAPIDTRLVEPAMMTADE
                     TAWLDAYHARVRETLAPAIDAPTREWLIKATAPIVRG"
BASE COUNT          441 a          820 c          888 g          413 t
ORIGIN      
        1 gcgctgctga agtttcacag tgagatcgag gcgcagcgct cgacgctcga ctacgacatc
       61 gacggcgtcg tctacaaggt cgaccgcatc gactggcagg agcggctcgg cttcgtatcg
      121 cgcaccccgc gctgggcgat cgcgcacaaa ttcccggccg agcaggcgac gaccgtggtc
      181 aaggaaatcg agatccagat cggccgcacc ggcgcgctta ccccggtcgc caagctcgaa
      241 ccggtcaccg tcggcggcgt cgtggtgcag aacgcgaccc tgcacaacga ggaggagata
      301 aagcgtctgg atgttcgcaa aggcgatacc gttaccatcc agcgcgccgg cgatgttatt
      361 cctcaggttc ttgacgtggt cctggaaaag cggctgcttg acgccaagcc gtataaattc
      421 cccacgaagt gcccgtgccc gctgcatacg gacgttgtgc gcgagaccat tgcgggcggc
      481 gcggagggag cgcgtgcccg ctgcaccgga gaattcgcgt gcccatatca ggcgctcggc
      541 caccttgaac acttcgtatc tcgccgcgct ttcgatatcg acggtctcgg cgaaaagcag
      601 atcgcctttt tctacgagca ggggtgggtc aaggagccgg ccgatatttt cacgctgcgc
      661 gagcgcaatg ggaaacttgt gcttcaaggg accgacgaca aaattcgcct cgaagacgtg
      721 gaaggattcg gcgaaacctc ggtgcgcaat ctattcagcg caatcgaggc gcgacgggaa
      781 atcacgctgg agcgtttcat ctattcgctt ggcatccgtc acgtcggcga gacgacggcg
      841 gtggcgctcg cgcgcggcta cggcagctgg aatgcctttc acgacgcgtg cctcaggctc
      901 gcccgcggca atgcggaagc cgaggaggag atggatgcgc tcgaccagat cggcgacacc
      961 gtgatcgaga gcctgcgcac ctatttcggc gaggcgcaca accgccgccg catcgaacgc
     1021 ctggcggcgc aggtgcgcgt ccgcgacgcg gagaagccgc gcgccgattc gccgatcgcc
     1081 ggcaagaccg tggtgttcac cgggaccttg gagaaaatga cccgcgacga ggcgaaggcc
     1141 tccgccgagc gcctcggcgc caaggtctcg ggctcggtgt cgaaaaagac cgactacgtc
     1201 gtcgccggcc ccggcgccgg ctccaagctc gcggaggcaa agaagctcgg cgtggcggtt
     1261 ttgacggagg acgagtgggc gaagctcatt cgctgatatt ggcagcgtca ctgcgaggag
     1321 cccggagggg cgacgaggca atccatactt catgcgccga aaagctggat tgcttcgcgg
     1381 agcctgtcat cgggccggcc acttcgggcc ggacccgttg gctcgcaatg acgagattgc
     1441 gcgattcacc cgcgcacgat cggcgccgtc gccttgatca gccattcgcg cgtcggcgca
     1501 tcgatggccg gagcgagcgt ttcgcgtacc cgcgcgtgat aggcgtcgag ccaggcggtc
     1561 tcgtccgcgg tcatcatcgc cggctcgacg agccgcgtgt cgatcggcgc caaggtcagc
     1621 gtctcgaagg cgttgagcgg cttttccgct ccggcgaccg gcggcgcctc gacgaccagg
     1681 accagattct cgatgcggat gccgtaggcg ccggtgcggt agtagccggg ctcgttggac
     1741 aggatcatgc cgcgcttgag cgccgcgctg ccgagcttgg agatgcgcgc cgggccctcg
     1801 tgcaccgaga ggtagctgcc gacgccgtgg ccggtgccgt gatcgaaatc gagcccggcc
     1861 tgccagagat attgccgcgc gaacgaatcg agctgagcgc cggtggtgcc ctcgggaaac
     1921 accgcgcggg caatggcgat atggcccttg agcacgcggg tgaaattccc ccgcatctcg
     1981 gcgccgggtg cgccgaccgc gatggtgcgc gtgatgtcgg tggtgccgtc ctcgtactgc
     2041 gcgccggaat cgatgagaaa gagttcgccc ggcgcgatac tgcggttgct gcgccgggtg
     2101 acgcggtagt gcacgacggc gccgttggcg ccggcgccgg cgatggtcgg gaaggaaacg
     2161 tccttgagga gcccggtgtc gcggcgaaaa ctttccagcg cctcgaccgc gtcgatctcg
     2221 gtgaggcggc cggccggcgc ctcgcggtcg aaccaggcga gaaagcgcgt caccgccgcg
     2281 ccgtcacgca gttgcgccgt atgcgcgccg gcgatctcgg ccgcgttctt caccgccttc
     2341 atcggcgcga tcggatcgcc gccgcgcaga atcgtgccgc cgctctcggc gaggaggcgt
     2401 gcgatcgcct ccggggtggc ggaaggatcg agccgcacct tgcgccgctc gccgccgagc
     2461 gcggcgaggc cgtgttcgaa ctccgcgctc gcgcgcacgt cggcaagctc ttcgaggcga
     2521 tgacggacgt cgttgccgaa cttgcggccg tcgacataga ga
//
LOCUS       DATMQB010000421         4243 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3306533, whole genome shotgun sequence.
ACCESSION   DATMQB010000421 DATMQB010000000
VERSION     DATMQB010000421.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4243)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4243)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4243
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3306533"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1100)
                     /locus_tag="VNY79_11980"
     CDS             complement(<1..1100)
                     /locus_tag="VNY79_11980"
                     /inference="COORDINATES: protein motif:HMM:NF015905.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016829 - lyase activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MmgE/PrpD family protein"
                     /protein_id="HWX73214.1"
                     /translation="MSALAYESSSAEVDHTLADVLSQFALPLGYNDIPAAVRERAKHL
                     ILDSVGIALASTKYPFASVSLAALQELGTGTSAVIGVGRRLSLRDAVLMNGILVHGLD
                     FDDTHSRGVIHATASSFPCALALADRDDADGETLLAAYVAAMEVATRLGSVAKGGFHQ
                     VGFHPTGLIGAFGCALAAAKLLGLDPQRATMAQGIVLSMASGSLEFLEGGAWTKRMHP
                     GWAGVAGITAATLAKHGFVGPRGAYDGRFGLYASHLGSHFAQADLTLATEALGRSWQI
                     DEVAVKPIPACHFAHAAADAAVALHDKYHLPAKDIRRVRVLVPQEVVKTVCEPIANKR
                     NPANSYDAQFSIPYIVATGLLKGRFTLAELED"
     gene            complement(1838..2659)
                     /locus_tag="VNY79_11985"
     CDS             complement(1838..2659)
                     /locus_tag="VNY79_11985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018319660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate dehydrogenase"
                     /protein_id="HWX73215.1"
                     /translation="MTILPEGELTVAVGGFGAIGRRVAEALDRGIPGLRLSAVSARDI
                     DKAKRGMSAFSRQVPVLPLKALADVADVVVDAAPAHALRELAEPALRAGRQLIVISVG
                     ALLQAGDLVELARRHRAQIIVPSGALLGLDAVTAAAEGKINAVRMISRKPVKALLGAA
                     HLVAKGIDISNLKEPMKVFSGSAAEAAIGFPENLNVAAALGLAGIGAERTMIEVWADP
                     QLTRNTHRIEVDADSAIFSMTIENIPSENPKTGRITALSIIACLRKLTAPLRIGA"
     gene            complement(2735..3706)
                     /locus_tag="VNY79_11990"
     CDS             complement(2735..3706)
                     /locus_tag="VNY79_11990"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HWX73216.1"
                     /translation="MSTPNSAVLVDWFERLALLLAWAFVIIVFGAVRPNTFLTWGNFS
                     AILGSQAVLVVVALGLTLSLTAGDYDLSIASVLSLAGTVLAVLNARNGVPIGWAIAAA
                     LAVGAAVGFINGFFVIFFRINSMIVTLGIGTFVHGVTLWLGDQETISGISSGLVEAVI
                     VRRLFGVPLSFYYAFALCVLIWYVFSYTVLGRRLLFVGRGREIARLSGIRVDRLRWGC
                     FIVSGLMGAIAGILYVGTVAAADPNSGLSFLLPACAAAFLGATSINPGRFNPWGTMIS
                     VYFLVTGITGLSILGVSTFIQDLFYGGALVVSVTLSQIVRGREERLT"
     gene            complement(3782..>4243)
                     /locus_tag="VNY79_11995"
     CDS             complement(3782..>4243)
                     /locus_tag="VNY79_11995"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73217.1"
                     /translation="CPRCKVNYINIPILDFATKTQTIVQSALTADPSINYVIPLYDVL
                     SQWVVPAVTITGREDKTKIVTFNGTPFAIGFIQQGKIEMDVGENLDWIGHGVVDAEMR
                     VLCGLPMVKDPHIPLYIFDQANADTAGKPPQPSTGYGDAYIAGYRKLWKLQ"
BASE COUNT          812 a         1364 c         1387 g          680 t
ORIGIN      
        1 ttgtcttcca gctcggcgag tgtgaagcgt cccttcaaca ggccggtcgc cacgatgtag
       61 gggatggaga actgcgcgtc gtagctgttg gcgggattgc gcttgttcgc gatcggctcg
      121 cacaccgtct tgaccacttc ctgcggcacc agcacccgca cgcggcggat gtccttggcg
      181 ggcaggtggt atttgtcgtg cagcgcaacg gcggcatcgg cggcggcgtg ggcgaagtgg
      241 caggccggaa tcggtttcac cgcgacctcg tcgatctgcc agctgcggcc gagagcttcg
      301 gtcgcgagcg tgaggtccgc ttgcgcgaag tggctgccaa gatggctggc gtaaaggccg
      361 aagcgaccgt cataggcgcc ccgcggcccg acgaagccgt gcttcgcgag cgtcgcggcc
      421 gtgatcccgg ccaccccggc ccagcctgga tgcatgcgct tggtccaggc gccgccctcg
      481 agaaactcca ggctgccgct cgccatcgac agcacgatgc cttgcgccat agtggcgcgc
      541 tgcggatcaa gaccaagaag cttcgccgcg gcgagggcgc agccgaacgc gccgatcagc
      601 ccggtcgggt ggaagccgac ctgatggaag ccgcccttgg caaccgaccc cagcctggtg
      661 gcaacttcca tcgccgccac gtaggccgcc agcaaggttt caccatccgc atcgtcgcgg
      721 tcggcgagcg ccaaggcaca agggaagctg ctcgcggtcg catgaatgac gccgcgcgaa
      781 tgcgtgtcgt cgaagtcaag gccgtggacg agtatcccgt tcatgagcac ggcgtcgcgg
      841 agggacaggc ggcggccgac gccgatgacg gccgatgtgc cggtgcccaa ttcttgcaat
      901 gctgcaaggg aaacggacgc gaagggatat tttgtcgaag cgagcgcgat gccgacggag
      961 tcgaggatca aatgcttggc gcgctcgcga accgcagcgg gaatgtcgtt ataaccgagt
     1021 ggcaacgcga actgcgaaag cacgtcggca agcgtgtgat cgacctcggc cgacgaagat
     1081 tcataggcca gtgcgctcat cgggggcgtc tcctcgatct ttcagctcgg cggccggaaa
     1141 tcgactactg ttttccaggt gccgccgcgg cgcggttcca gtcgctacca tcgtagcata
     1201 cggcatcgcg gccggcgcgc tgcctgcgga ccgcttcccc acggcgcgag aaggccgctg
     1261 gtgcagcttt acggttcact gagccaggag caaaacgcaa ggttcaatgg atgcgaggcg
     1321 aaggttgcac gcacgacagt gccgcgcccg ccgcaatcac aggtcaggcc aattccttag
     1381 tgaatgcgac ggccgcgtcc ggcaacttgc cgaccgatcg aacaagtagc tccgccggcc
     1441 aacgcctaga agcttgtgct cgaccgcttt gagcaatttg gctgctaaaa cagcttggaa
     1501 accccgtatc cgagcaggcc aatccaggcc acggttacaa tcaaggcaat ggcgaggcct
     1561 ccgagcggca agacgcggtt gagcactgct tgcatggcac cgatccctgt ttaccgaata
     1621 gcgccattcg atggcgcttg gtgcacgtgt ggcaatcgct aggcaccttc atcgcactct
     1681 cgcccgagcc ggtggcgccc acagtgattt gcaacacatt tttggcggtc gggccgcccc
     1741 ccctctcggc tcagccgcag gccggtaggg tgtgaaaagg cgaggtttgc gcgagcatcg
     1801 cgcccaatct tgccgccggc gcggccgacc gcgccgctca cgcgccgatg cggagcggcg
     1861 ccgtcagctt gcgcaggcag gcaatgatgc tgagcgcggt gatgcgtccc gttttgggat
     1921 tttccgaagg aatattctcg attgtcatcg agaaaatcgc gctgtcggca tcgacctcga
     1981 tgcgatgggt gttgcgcgtg agctgcgggt ccgcccacac ctcgatcatc gtccgttccg
     2041 ctccaattcc cgccaacccc aatgcggccg ccacattgag gttctccgga aaaccgatgg
     2101 ctgcctcggc ggcactgcca ctgaagacct tcatcggctc tttcagattg gagatgtcga
     2161 tgcccttggc gacaagatgg gcggcgccga gaagcgcttt gaccggcttg cgcgaaatca
     2221 tgcgcaccgc gttgatcttg ccctccgcgg cggcagtcac ggcgtcgagc ccgaggagcg
     2281 cgccgctcgg cacgatgatc tgcgcgcgat gccggcgcgc gagctcgacg aggtcgccgg
     2341 cctgcaacag cgcgccgacg ctgatgacga tgagttggcg cccggcgcgt agggcaggct
     2401 cggccagttc gcgcagggcg tgagccggcg cggcgtcaac gaccacgtcg gcgacatcag
     2461 cgagagcctt taagggaaga acgggcacct gccgcgagaa cgcgctcatt ccccgcttcg
     2521 ccttgtcgat gtcgcgggcc gagacggcgg aaaggcgcaa ccctggaatg ccgcggtcga
     2581 gggcttcagc gacgcgtcgg ccgatggcgc cgaagccgcc gactgcgacg gtgagttcac
     2641 cttcaggtaa gatcgtcacg gccgaccttc cttttcagcg gggtcgaaaa ctacgcaagc
     2701 gccggcttgt tcggccaagc ggagcggtcc aggcctacgt gagccgctcc tcgcgcccgc
     2761 ggacgatctg cgagagcgtg accgacacca ccagcgcgcc accatagaac aggtcctgga
     2821 tgaaggtgct gacgccgaga attgaaagcc cggtgatgcc ggtgaccagg aaatagacgc
     2881 tgatcatcgt tccccagggg ttgaagcgcc ccggattgat gctggtcgca ccgagaaacg
     2941 cggccgcgca cgccggcagc aggaatgaga gacccgagtt cggatcggcc gcggccaccg
     3001 tgccgacata gaggatgccg gcaatcgcgc ccatcaggcc ggagacgatg aagcagcccc
     3061 agcgcagccg atcgacccgg atgccgctca gccgcgctat ttcgcggccg cgaccgacga
     3121 acaacaggcg ccggccgagc accgtatagg agaacacgta ccaaatgagc acgcacagcg
     3181 cgaacgcata gtagaagctg agcggcacgc cgaagagccg cctgacgatg accgcctcga
     3241 cgaggccgga cgagatgccg ctgatggtct cctggtcgcc gagccaaagc gtgacgccgt
     3301 gcacgaacgt gccgatgcca agcgtcacga tcatcgagtt tatgcggaag aagatgacga
     3361 agaatccgtt gatgaatccg accgcggcgc cgactgcgag cgctgccgcg atcgcccagc
     3421 cgatgggcac cccgttgcgc gcgttgagca ccgccagcac cgtgccggca agactcagca
     3481 cgctggcaat cgacagatcg tagtcgccgg cggtcaacga cagcgtcagg ccgagcgcca
     3541 cgacgacgag cacggcctgc gagccgagga tcgccgaaaa attcccccag gtcaggaagg
     3601 tgttcggccg caccgcgccg aagacgatga tcacgaacgc ccacgccagc agcagcgcca
     3661 ggcgctcaaa ccagtcgacg agcacggccg agttgggagt gctcatcgcc atggatcccc
     3721 cgatgggcgc gcgccgcagc cggaccggat gtccctctcg cctaccgcga cggcccggcg
     3781 ctcactgaag cttccacagc ttgcgatagc cggcgatata ggcatcgccg taaccggtcg
     3841 agggctgcgg cggcttgccg gcggtgtcgg cgttcgcctg atcgaagata tacagcggga
     3901 tatgcggatc cttcaccata ggcaggccgc acaagacccg catctcggcg tcgacgacgc
     3961 cgtggccgat ccagtcgagg ttttcgccga catccatctc gatcttgccc tgctgaatga
     4021 acccgatcgc gaacggcgtg ccgttgaagg tcacgatctt cgtcttgtcc tcgcgaccgg
     4081 tgatggtaac cgccgggacc acccattgcg acagcacgtc gtaaagcggg atgacgtagt
     4141 tgatcgacgg atccgccgtc agcgccgact gcacgatggt ttgcgtcttc gtggcgaaat
     4201 caagaatcgg gatgttgatg tagttgacct tgcagcgcgg aca
//
LOCUS       DATMQB010000422         4098 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1755810, whole genome shotgun sequence.
ACCESSION   DATMQB010000422 DATMQB010000000
VERSION     DATMQB010000422.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4098)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4098)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4098
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1755810"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..262
                     /locus_tag="VNY79_12000"
     CDS             <1..262
                     /locus_tag="VNY79_12000"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73218.1"
                     /translation="ANLGDLPTIDFDYPAKVTIFSFRDGHLLLVAMDEGEPSRLRIVI
                     SAQLNKARGTYDGQFVVDMGGNQLQLDSGPVSCRVGRRQQQK"
     gene            501..935
                     /locus_tag="VNY79_12005"
     CDS             501..935
                     /locus_tag="VNY79_12005"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73219.1"
                     /translation="MFHGKQAPTKPKRRRKALPVLGAAGLSLSLAGAASAAAIGGPTT
                     DMLTRNVAVSHEINLSEEEIADVSLATFYVVDNEGAAPSGRGARLAMGCGGCGGCGGC
                     GGCSSNSDYQAPTTWSNAGTLSVNPTRKAVRAPKRTSGQPYR"
     gene            1267..1512
                     /locus_tag="VNY79_12010"
     CDS             1267..1512
                     /locus_tag="VNY79_12010"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73220.1"
                     /translation="MMLKKFAAALLATSMIAAVATVAYGMGGGGGGSGAGAAGGAGAA
                     GGAGTPPGGSPSVTDGATVPSQPAAPAARTQHRTRSP"
     gene            complement(1557..3212)
                     /locus_tag="VNY79_12015"
     CDS             complement(1557..3212)
                     /locus_tag="VNY79_12015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019996154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004467 - long-chain fatty acid-CoA ligase
                     activity [Evidence IEA];
                     GO_function: GO:0005324 - long-chain fatty acid
                     transporter activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent acyl-CoA ligase"
                     /protein_id="HWX73221.1"
                     /translation="MSLPMSVPASAQDHDPTGPPPLARLFAPSERTLPKMLARQAERY
                     AGRRLVTIGGRALTYADTLAAAAGYAEALAGAGVKAGDRVAIMCGNRPEMLLTFLGCA
                     WLGAIAVPINTASRGAQLAHILGNCGARLLVIERELTPVLAALDRSGLEALWRVGQGD
                     ADDQPRFKSAPFPEPGMRVPPHPVEPGDTLAILYTSGTTGLSKGVCCPHAQYFWWGVY
                     TSRLLGVRENDVLLTTLPLFHTNALNSFYQALLNGAALIVEPRFSASAFMPALARHEA
                     TVTYVLGAMVPILLAQAPGDADRGHRVRVALAPAVPAHFHRQFTERFGIGLVDGYGST
                     ETNCIMGAPLSEQRPGAMGRLLSGFAARVVDAHDNEVADGEAGELVLRADEPFAFATG
                     YFGMPEETVEAWRNLWFHTGDRVVREGDGYYRFIDRMKDAIRRRGENISSFEVEQVLV
                     SHPQVENAAVFPVRSELAEEEVMAALVLRPGAQVSYAELLDFCRPRMPYFAVPRYLQF
                     VDALPVTENGKVTKYKLRERGVTAETWDREAAGYKVTSGRRGA"
     gene            3390..3647
                     /locus_tag="VNY79_12020"
                     /pseudo
     CDS             3390..3647
                     /locus_tag="VNY79_12020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014285418.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="2Fe-2S iron-sulfur cluster binding
                     domain-containing protein"
     gene            3722..>4098
                     /locus_tag="VNY79_12025"
     CDS             3722..>4098
                     /locus_tag="VNY79_12025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008968259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rieske 2Fe-2S domain-containing protein"
                     /protein_id="HWX73222.1"
                     /translation="MGQYRTNAAAVRDLVRETEVHRDVYVDQEIFDLEMEHLFANAWI
                     YVGHDSQVPNAGDYYGTTIGKQPVLMVRHTDGVVHVLYNRCPHKGTRITIDTCGNAGK
                     FFRCPYHAWSFKTDGSLLAIPLR"
BASE COUNT          754 a         1321 c         1354 g          669 t
ORIGIN      
        1 agcgaacctt ggcgatctgc cgacgatcga ttttgactat ccggccaaag tcaccatctt
       61 cagtttcaga gacggacatc ttctccttgt cgcgatggat gaaggcgagc cctctcgtct
      121 tcgcatcgtc atttccgctc aactcaacaa ggcccgcgga acttacgatg ggcagttcgt
      181 ggtcgacatg ggtggcaatc agttgcagct cgacagtggg ccggtcagtt gccgggtcgg
      241 ccgtcgacaa caacaaaaat agattggcga tcggatcgga tcagcgacat ccggttcata
      301 ccgcccgcga cggacgcaac gtcgcccttg gcgctaagcg ggcattgcgt gatgggcgag
      361 gttccgctcg tgcccgcctt gcgctgcatg gcggacattc gccggcggac gccggtcatg
      421 ccctagtgca aggccgggcg ggcgactaca tgcccagaca atcgtttcgt cgaatttcat
      481 ttcaagcatc ggaggccgac atgttccacg ggaagcaagc gcccaccaag ccaaagcgca
      541 ggcgtaaagc tctaccggtg ttgggcgccg ccgggttgtc gttatcgctc gcgggcgcgg
      601 catccgcggc ggcgatcggg gggccaacga ccgacatgct gacgcgaaac gtcgccgtga
      661 gtcacgaaat caacctctct gaggaagaaa tcgctgacgt cagcctcgcg acattctacg
      721 tcgtcgacaa cgaaggcgcg gcaccatccg ggcgcggcgc ccggctggcg atggggtgcg
      781 gcggctgcgg cggctgcggt ggctgcggcg gctgctcgtc gaacagcgac taccaggcgc
      841 cgacgacctg gagcaatgcc ggcacccttt cggtcaaccc cacgcgcaaa gccgtacgag
      901 cgcccaagcg cacatcgggt caaccatacc ggtaagctga cgagcgaagc tcccatccgc
      961 gacgagcgct gcgcgtcgcg accgacgtct ccgggcgcgc cggcgtattg cgcgcacggc
     1021 cgacccatgc ggacgacggc gcgcggcgca gcccgcgcag cgcgagcacg ccacgcgcaa
     1081 cgaaagaagc gtaagactta ccttgaactt taagttcgcg atctgactta tccgtcagaa
     1141 tctgactcat tagtaatttg gcgattttgg tttgctgcgc aaacctgcgt tcagtgacga
     1201 tcgtgctcgc cgcgccaggc tgccgcgccg cggcttgtcc gccattcgca aaacttggag
     1261 agacacatga tgttgaagaa gtttgccgct gcgttgctcg caacctcgat gatcgcggct
     1321 gtggcgaccg tcgcctacgg catgggtggt ggcggcggtg gcagtggcgc aggtgccgcg
     1381 ggtggcgccg gcgccgcggg cggcgcagga acgccgccgg gcgggtcgcc gtcggtgacc
     1441 gacggtgcca ccgtgccgag ccaaccggcc gcgccggctg cccgcacgca gcatcgcacg
     1501 cgatcgccat agtcgctggc ggcgcgccgg cgcgcgtcgc cgcggacgcg cgctttctat
     1561 gccccgcgcc ttccggaagt gactttgtag ccggccgctt cgcggtccca cgtctccgcc
     1621 gtgacgccgc gctcacgcag cttgtacttg gtgactttgc cgttctcggt caccggcaga
     1681 gcatcaacga attgcaggta gcgcggcact gcgaaatagg gcatgcgcgg ccgacagaaa
     1741 tcgaggagct cggcatagct gacctgtgcg cctggccgca gcaccaaggc cgccatcact
     1801 tcctcctcgg caagctcgga gcggaccggg aacaccgcgg cattctcgac ctgcggatgg
     1861 ctcaccagca cctgctcgac ttcgaaggag gaaatgttct cgccgcggcg gcggatggcg
     1921 tccttcatgc ggtcgatgaa tcggtagtag ccgtcgccct cgcgcacgac gcggtcgccg
     1981 gtgtggaacc agagattgcg ccaggcctcc acggtctctt ccggcatgcc gaaatagccg
     2041 gtggcaaagg cgaaaggctc gtccgcgcgc aacaccagtt ctcccgcctc gccgtcggcg
     2101 acctcattgt cgtgcgcatc gacgacacgg gcggcaaagc ctgacaacag ccgccccatc
     2161 gcgcctggcc gttgttcgct aagcggcgcc cccataatgc agttcgtttc ggtcgagccg
     2221 tagccgtcga cgagtccgat gccgaagcgt tccgtgaact gccggtgaaa atgggcaggc
     2281 actgccggcg ccagcgcgac acggacgcgg tggccgcggt cggcgtcgcc cggcgcctgc
     2341 gccagcagga tcgggaccat ggcgccgagc acgtaggtca ccgtcgcctc gtgccgcgcc
     2401 agcgccggca tgaatgccga cgccgagaag cgcggctcga cgatgagcgc cgctccgttg
     2461 aggagcgcct gatagaagct gttgagtgcg ttggtgtgga agagcggaag cgtcgtcagc
     2521 agcacgtcgt tctcgcggac gccgagaagc cgcgacgtgt agacgcccca ccagaagtat
     2581 tgggcgtgcg ggcagcagac gcccttcgag aggccggtcg tgccggaggt atagagaatc
     2641 gcgagcgtgt cgcccggctc gaccggatgc ggcggcacgc gcattcccgg ctccggaaac
     2701 ggagccgatt tgaaccgcgg ctgatcgtcc gcatctccct ggcccacccg ccacagcgcc
     2761 tcgagccccg agcggtccag tgcagcaaga acgggcgtca gctcacgttc gatcacgagg
     2821 agccgggcgc cgcaattgcc gagaatgtgc gcaagctgcg ccccccgcga ggcggtattg
     2881 atgggaacgg cgattgcgcc cagccaagcg cagccgagga aggtcaacag catttccggg
     2941 cggttgccgc acatgatggc gacgcgatcg ccggccttga cgccggcacc ggcgagcgcc
     3001 tcggcgtagc ccgcggcggc cgccaaggtg tcggcatagg tgagcgccct gcccccgatc
     3061 gtcacgaggc gacgcccggc gtagcgctcg gcctggcgcg cgagcatctt cggcagtgtg
     3121 cgttcggatg gtgcaaagag ccgggcaagc gggggcggac cggttggatc gtgatcttgc
     3181 gcgctcgcgg gcactgacat cggcagtgac atggccactc acatgaacgc tgatatcggc
     3241 gcggacattg gcgctgacct ctcaccgcag gattgcgtta ccagaaagcg gtccgttggt
     3301 ttaggcttaa atatcagaac ggacggcgga cttccgatgg cgaggcggcc atggcggcgg
     3361 gagacgagat gaccgcggat agccagatcg aggtcgtgct gcagcgttcc ggactgacct
     3421 ttattgttcc gcccgacaag agcattctgc aggtgctgat agaggaaggc atcgacccga
     3481 tgtacgattg ccagcgcggc gagtgcggta tctgccaggt tgcggtcctc gagggcgtgc
     3541 ccgatcaccg ggatcacatt ttgagcgatg acgagcgcgc cggaaacaag gtcatgcaaa
     3601 tctgcgtgtc gagagccaag acgccgcgtc ttgtgctcga cctttaggaa gcaaagatac
     3661 cgcgcaagca gcctcaatcg gtcgaaacgc acggtaagaa acgatccaga ggagacggcg
     3721 catgggccag tacaggacga acgcagcggc ggtccgcgac ctggtgcggg agaccgaggt
     3781 ccatcgcgac gtttatgtcg accaggagat cttcgacctg gaaatggagc acctgttcgc
     3841 caacgcctgg atctatgtcg gccatgacag ccaggtgccc aatgccggcg actactacgg
     3901 caccacgatc ggcaagcagc cggtgctgat ggtgcgccac accgacgggg tggtgcacgt
     3961 cctctataac cgctgtccgc acaagggcac gcgcatcacc atcgacacct gcggcaatgc
     4021 cggcaagttc ttccgctgcc cctaccacgc ctggtcgttc aagaccgacg gctcgctgct
     4081 cgccatcccg ctgcgcaa
//
LOCUS       DATMQB010000423         6200 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_841836, whole genome shotgun sequence.
ACCESSION   DATMQB010000423 DATMQB010000000
VERSION     DATMQB010000423.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6200)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6200)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6200
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_841836"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..508)
                     /locus_tag="VNY79_12030"
     CDS             complement(<1..508)
                     /locus_tag="VNY79_12030"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF044908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047617 - acyl-CoA hydrolase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HWX73223.1"
                     /translation="MRAAAGALRRGDDRPDGTSGLRQGGADSMTTRAWKTPRGPAPAL
                     DFERLAAMVENCAFHKWLGVKLRALDDAGIAIEMPWRAEFESDPVVGYTHGGILASLI
                     DLAADYAVAARLGRGVPTVDVHVDYHRAAMPGPLVAHAAVVKLGGTLGTAEARIYDER
                     DNLIASGRA"
     gene            complement(421..1422)
                     /locus_tag="VNY79_12035"
     CDS             complement(421..1422)
                     /locus_tag="VNY79_12035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011440047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HWX73224.1"
                     /translation="MKAVVFDAHGPLDNMRYRDAPDPKPGPKDVLIRVRALALNGFDP
                     MVLRGIAGLKTPLPMTPGADIAGEIVALSAEVDRAHWKVGDRVTVIPNQDHGMVGETL
                     VGGASELFATESRYLLPVPDAVSFVDAACLPVAYGAALRMMETRAQLKAGEKVLILSA
                     AGGVGTCCVQLAKAAGCEVVACASSGTRAERLKGIGADHVVDTSQQNYVAEIHKLYGK
                     PRIRGGGGVDVIVNYTGGDTWAECFRALGRHGRLLTCGATAGFDPKTDLRYIWSFEFN
                     IIGCNGWTRDDQTELLNRVADGRLKPIKYCELPLERFGEAMTDLMERRVFGKAVLIP"
     gene            complement(1419..2171)
                     /locus_tag="VNY79_12040"
     CDS             complement(1419..2171)
                     /locus_tag="VNY79_12040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004115406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73225.1"
                     /translation="MSEPSALAVADLVAGYSAEVDILKGVSIALAPREIVTVVGPNGA
                     GKSTLMKAIFGLIAPKAGRVMLAGESITGLRPSVIARRGVGYVPQRENVFPSLTVAEN
                     LEMGLVAAPNRPLNRRFDAMYALFPRLAERSRQKVDTMSGGERQMVAMARALMPEPSV
                     LLLDEPSAGLAPLLVDAMFEQIRAINREGITILMVEQNARAALALSDRGYVLDLGRNA
                     HEGRGREMIDDPRIAELYFGAAVPADNKGHPK"
     gene            complement(2168..2965)
                     /locus_tag="VNY79_12045"
     CDS             complement(2168..2965)
                     /locus_tag="VNY79_12045"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73226.1"
                     /translation="MTATRKAGEPILAVSDVTKRFGGLLAVDRATFAVAHGSITALIG
                     PNGAGKTTLLDLVSGYDRPDFGAVRFEGRRVDGLASYRVARRGVVRTFQLTRVFAAMS
                     VRDNMMLGAQRHPGEGLHRLAFSRAAVRRAEAAARERAERLLRAFALDAKASEYAGAL
                     SGGQRKLLEFARALMAEPRLVLLDEPMAGVNRALGAKLLDEVERLRREEGMTFLFIEH
                     DMDIVMQRADRVVVMAEGQVVAEGPPEFIRRDQRVIDAYLGRRGNAA"
     gene            complement(2962..3897)
                     /locus_tag="VNY79_12050"
     CDS             complement(2962..3897)
                     /locus_tag="VNY79_12050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018114847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX73227.1"
                     /translation="MSFFDLDFWVGVGIVAGIYGIFALGLQLNVGFTGLINLGQAGFM
                     CVGAYAMGMLVVDAGWPLGLAFPAAIVIAVAAGALVGLASLRLRADYFGIVTIAFSEI
                     VRYVFQNAAFAGGNQGIIGYDAEWRGFQSWASERLAAIGLGEAAEVPLLVAVWATLLL
                     CLAALRALQLSPWGRVLKAIREDEDAAAALGKNVFAFKLQSLGIAAALATIAGFFLAM
                     NVTYLYPSEFDPSFTFFGYAVLILGGFASYGGVVVGAVLLCALTEGLRFLDLPLSAGQ
                     AGSLRFIIVGLILICLSMFRPQGLLGSKAEMQLRA"
     gene            complement(3894..4904)
                     /locus_tag="VNY79_12055"
     CDS             complement(3894..4904)
                     /locus_tag="VNY79_12055"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX73228.1"
                     /translation="MTRGLEAASGAPPGAPERRFESIPAAARLAAVLIAAAILMSFAR
                     GPIAVGQTTLNGLVSAGYLALGAVGLTLVFGTLRIINFAHGDLLTLGAYLTFGISALG
                     LPFWPAAAVAVALTALIAYALDFIIWEPMRRARTSTLQLFLVAIGLAIVIRYTIQFFA
                     GSQVRGVGQDVLTSVNLGPFHLGALQALVLVVGVVAIAAVGLALAFTRLGKQIRALSD
                     NMALAEVCGIDTRRAVRLIWLIAGGLAALAGVLYAAAVGSVNPNFGFFILLGLFTAAV
                     LGGIGSAYGALAGGIVIGLAQEWSTLFFNTRWKPVVGFAILIVMLLVMPRGIFGGGRA
                     RS"
     gene            complement(4901..>6200)
                     /locus_tag="VNY79_12060"
     CDS             complement(4901..>6200)
                     /locus_tag="VNY79_12060"
                     /inference="COORDINATES: protein motif:HMM:NF013275.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX73229.1"
                     /translation="RWKRRRAIAASYDAEGGQMIGRRSLLTAMMAAALLGGLSSARAT
                     DQVSLTIGKLLELTGPLSETGPSQDKAVSIAIDYANQSAAAAGVPLKITAVSADAQGD
                     PQAALSAARALVAKGASAIVGPSITPESIAVANGLTIQKKVTLWPTGTAMRLRTIKDE
                     GTIFRTVPPDSLQAYALAAALTDKMGDPKDKLLSIAYRNEPYGEGLAKGLVAAWTAKG
                     GKVQGPVVFDPGQATFDSEAQQVVDNNPDAYVVIDYPDTFAKFGASLVRTGKYDASKL
                     VVPDALAFSTVPSNIPPQALEGARGTRGGSDMSTEAYKLFDQLWTKAGGVEHFALDAN
                     SFDSTTLVVLAAAAAHSADAGAIAGKIHDVTRSGAPKFGPTKLGEALKAAWSGEPIDY
                     VGVAGAFEFAANGDPTISRFDIYEYKGGKLDVIKQIDASK"
BASE COUNT         1080 a         2037 c         2126 g          957 t
ORIGIN      
        1 gcgcgcggcc gctggcgatg aggttgtcgc gctcgtcgta gatgcgcgcc tccgctgttc
       61 ccagtgtgcc gccgagcttt acgaccgcgg cgtgcgcgac cagcggcccc ggcatagcgg
      121 cgcgatgata atcgacgtgc acgtcgaccg tcggaacgcc gcgcccgagc cgcgccgcga
      181 cggcgtagtc ggcggcgagg tcgatcagcg aagcgagaat gccgccgtgg gtgtagccga
      241 ctaccggatc ggactcgaac tccgcgcgcc acggcatctc gatggcgatg ccggcgtcgt
      301 cgagcgccct cagcttaacg ccgagccatt tgtggaaggc gcagttctcg accatagcgg
      361 cgagccgttc gaaatcgagc gccggcgccg ggccgcgcgg agtcttccag gcgcgcgtgg
      421 tcatggaatc agcaccgcct tgccgaagac ccgacgttcc atcaggtcgg tcatcgcctc
      481 gccgaagcgc tccagcggca gctcgcaata cttgatcggt ttgaggcggc catccgcaac
      541 acgattaagc aattcggtct ggtcgtcacg cgtccagccg ttacagccga tgatattgaa
      601 ctcgaaggac cagatatagc gcaagtccgt ctttggatcg aaacccgccg tcgcgccgca
      661 ggtcagcaga cggccgtggc ggccgagcgc gcggaagcac tcggcccagg tgtcgccgcc
      721 agtatagttg acgatgacgt cgacgccgcc gccgccgcgg atccgcggct tgccatagag
      781 tttgtggatc tcggcgacat agttctgctg ggaagtatcg acgacgtgat cggcgccaat
      841 acccttgagc cgctcggcgc gcgtgcccga gctggcgcag gcgacgacct cgcaaccggc
      901 cgccttggcg agttggacgc agcaagtgcc gacgccgccc gccgccgaga ggatcagcac
      961 cttctcgcca gccttgagtt gcgcccgtgt ctccatcatg cgcagcgcgg cgccgtaagc
     1021 gacgggcaga cacgccgcgt cgacgaagct caccgcgtcg ggtacgggca agagatagcg
     1081 cgactcggtt gcgaagagtt cgctcgcgcc gccgacgagg gtctcgccga ccatgccgtg
     1141 gtcctggtta ggaatgaccg tgacgcggtc cccaaccttc cagtgcgccc gatcgacttc
     1201 ggcgctgagg gcgacgatct cgccggctat gtcggcgcca ggcgtcatcg gcaacggcgt
     1261 cttcaggccc gcaatgcctc gcaggaccat ggggtcgaac ccattgagcg ccagggcgcg
     1321 cacccggatc aagacgtctt tcggacctgg tttcggatcc ggcgcatccc gatagcgcat
     1381 gttatcgagc ggcccgtggg cgtcgaacac gacggctttc atttcggatg gcccttgttg
     1441 tcagcgggca ccgcggcgcc gaaatagagt tccgcgatgc gtggatcgtc gatcatctct
     1501 cgcccgcgcc cctcgtgggc gttgcggccg agatcgagga catatccgcg gtcggagagc
     1561 gcgagcgctg cccgtgcgtt ctgttcgacc atgagaatcg tgatgccttc gcggtttatg
     1621 gcgcggatct gctcgaacat cgcatcaacc aggagcgggg cgaggccggc cgagggctcg
     1681 tcgaggagca gcaccgaggg ctcgggcatt agcgcgcgcg ccatcgccac catctggcgc
     1741 tcgccgccgg acatcgtgtc gaccttttgg cggctgcgct cggcgagtct gggaaagagg
     1801 gcgtacattg cgtcaaagcg gcgattgagc ggtcggttcg gagcggcaac caagcccatc
     1861 tccagatttt ccgcaaccgt aagactggga aaaacattct cccgctgcgg cacgtagccg
     1921 acgccgcgcc gcgcgataac gctgggacgc aggccggtga tggactctcc ggcgagcatg
     1981 acccgtcccg ccttgggcgc gatcaggccg aagatcgctt tcatcagtgt cgacttgccc
     2041 gcgccgttgg gtccgacgac agtgacgatc tctcgcggcg cgagcgcgat cgatacgccc
     2101 ttgaggatgt cgacctccgc ggaatagcca gcgacgagat ccgcaaccgc aagcgctgac
     2161 ggttcgctca cgccgcattt cccctgcggc cgagataggc gtcgatgacc cgctgatcgc
     2221 gacggatgaa ttcgggaggg ccttcggcga cgacctgacc ctccgccatg acgacgaccc
     2281 ggtcggcgcg ctgcatgacg atgtccatat catgctcgat gaagaggaac gtcatgccct
     2341 cctcgcgccg taggcgctcg acttcgtcga ggagcttggc cccgagcgcc cggttgaccc
     2401 ccgccatcgg ctcgtcgagc agcacgagcc gcggctctgc catcagcgcc cgcgcgaatt
     2461 cgagcagctt gcgctgcccg cccgacagcg ccccggcgta ttcgctcgcc ttggcgtcga
     2521 gggcgaaggc gcgcaaaagg cgctcggcgc gctcgcgagc cgcggcctcc gcgcgtctca
     2581 cggccgcacg gctgaacgcg aggcgatgga ggccctcgcc ggggtggcgc tgtgccccga
     2641 gcatcatgtt gtcgcgcacg ctcatcgccg cgaaaacgcg cgtgagctgg aaagtgcgca
     2701 cgacgccgcg ccgcgcgaca cggtagctgg cgaggccgtc gacgcggcgg ccctcgaaac
     2761 gcacggcgcc aaaatcgggc cggtcgtagc cgctgactag gtcgagcagc gtcgtcttgc
     2821 ccgcgccgtt ggggccgatg agcgcggtga tcgagccgtg tgcgaccgcg aaggtagcgc
     2881 ggtcgacggc gagcaggccg ccgaagcgtt tggtcacgtc gctcacggcg aggatcggct
     2941 cgcccgcttt ccgggtcgcc gtcatgcgcg caactgcatt tcggccttgc tgccgagcag
     3001 cccttgtggg cggaacatgc tgaggcagat gaggatgagg ccgactatga tgaatcggag
     3061 cgagcccgcc tggcccgcgg acagcggtag gtcgaggaag cgcaggccct cggtcagcgc
     3121 gcagaggagg accgcaccga cgacgacgcc tccgtagctc gcgaaaccgc cgaggatcag
     3181 aacggcgtag ccgaagaagg tgaagctcgg atcgaactca cttgggtaga gataggtgac
     3241 gttcatggcg aggaagaacc cggcgatcgt cgccagcgcc gctgcgatgc cgagggactg
     3301 cagcttgaag gcgaaaacgt tcttgccgag cgccgccgca gcgtcctcgt cttcgcggat
     3361 cgccttgagc acgcgtcccc aggggctgag ctgaagcgcc ctgagcgcgg ccaggcagag
     3421 gagcagcgtg gcccacaccg cgaccagcag cggaacctcc gccgcctcgc cgaggccgat
     3481 cgcggcgagt cgctcagagg cccaggactg gaacccgcgc cactccgcgt cgtagccgat
     3541 gatgccctgg ttgccgccgg cgaaggcggc gttctgaaag acatagcgca cgatctcgga
     3601 gaaggcgatg gtaacgatgc cgaaatagtc ggcgcgcagg cgcaggctgg ccaggccgac
     3661 gagcgcgccg gccgcgacgg cgatgacgat cgccgcggga aaggcgagcc cgagcggcca
     3721 acctgcgtcg acgaccagca tgcccatcgc gtaggccccg acgcacatga accccgcctg
     3781 gccgagattt atgaggccgg tgaagccgac attgagttgt agcccgagcg cgaaaatgcc
     3841 gtagatgccg gcgacgatgc cgactccgac ccagaagtcg aggtcgaaga aactcaactg
     3901 cgcgcgcgcc cgccgccgaa tatgccgcgc ggcatgacga gcagcatgac gatcaggatg
     3961 gcgaagccga caaccggctt ccagcgagtg ttgaagaata gcgtcgacca ttcctgcgcg
     4021 aggccgatga cgatcccgcc ggcaagcgcg ccgtaagcgc tgccgattcc cccgagcacc
     4081 gcggctgtga agaggccgag caggatgaag aagccaaagt tcgggttcac cgagccgacc
     4141 gcggcagcgt agagcacgcc cgccagcgcc gcgaggccgc cggcgatgag ccagatgagc
     4201 cttacggccc ggcgcgtgtc gatgccgcaa acctcggcca gcgccatgtt gtcggagagt
     4261 gcgcgaatct gcttgcccaa gcgcgtgaac gcgagcgcga ggccgaccgc ggcgatggcg
     4321 acgacgccga ctaccagcac gagggcctgc agcgcgccga gatggaacgg ccccaggttc
     4381 acgctcgtga gcacgtcctg cccgacccca cggacctgac tgccggcgaa gaactggatg
     4441 gtgtagcgga tcacgatggc gagcccgatg gcgaccagga agagctgcag cgtgctcgtg
     4501 cgcgcgcgcc gcattggctc ccagatgatg aaatcgagcg cataggcgat gagcgccgtc
     4561 agggcgaccg cgaccgcggc ggccggccag aacgggagcc cgagcgcgct gatcccgaag
     4621 gtcagatagg cgcccagggt cagcagatcg ccatgagcga aattgatgat acgcaaggtc
     4681 ccgaagacga gcgtcaagcc gaccgcgccg agcgccaaat agccggccga tacgaggccg
     4741 ttcagcgtcg tctggccgac tgcaatcggg cctcgcgcaa agctcatcag aatcgcggcg
     4801 gcgatcagca cggcggcgag ccgcgccgcc gcaggaatgc tttcaaagcg gcgctccggc
     4861 gcgcccggcg gcgcgccgga ggccgcttcc aatccgcgtg tcacttcgag gcgtcgatct
     4921 gcttaatcac gtcgagcttg ccgcccttgt attcatagat gtcgaagcgg ctgatcgtcg
     4981 gatcgccgtt ggcggcgaat tcgaacgcgc cggcgacgcc gacgtagtcg atcggctcac
     5041 cgctccacgc cgccttcagc gcctcgccga gcttggtcgg gccgaatttc ggcgcgccgg
     5101 atctggtgac gtcatggatc ttgccggcga tggcgcccgc gtccgccgaa tgcgcggcgg
     5161 cggcggcgag aacgacgagc gtcgtcgagt cgaaactgtt ggcgtcgagc gcgaaatgct
     5221 cgaccccgcc cgccttcgtc caaagctggt cgaacagctt gtaggcttcg gtggacatgt
     5281 ccgagccgcc gcgcgtgccg cgcgcaccct cgagcgcctg cggtggaatg ttgcttggca
     5341 ccgtcgagaa ggcgagcgcg tcgggtacga cgagcttgct tgcatcgtac ttgccggtgc
     5401 ggaccaggga ggcgccgaac ttggcgaacg tgtcgggata gtcgatcacg acataggcgt
     5461 cggggttatt gtcgacgacc tgctgcgctt ccgaatcgaa ggtcgcctgc cccggatcga
     5521 acacgaccgg tccctgtacc ttgccgccct tggccgtcca ggcggcgacg aggcccttag
     5581 cgaggccttc gccgtagggc tcgttgcgat aggcgatcga gagcagcttg tctttcgggt
     5641 cgcccatctt gtcagtgagg gcggcggcga gcgcgtaggc ctgcaggcta tccggcggca
     5701 ccgtgcggaa gatcgtgccc tcgtctttga ttgtccgcag gcgcatggcg gtaccggtcg
     5761 gccataaggt gaccttcttc tggatggtca ggccgttggc gacggcgatc gattcgggcg
     5821 tgatcgacgg gccgacgatg gcagaggcgc ctttggcgac gagagcgcgc gccgcggaca
     5881 gcgccgcctg cggatcgccc tgcgcgtcgg cggagacggc ggttatcttg agggggacac
     5941 cggcggcggc ggcggactgg ttggcgtagt cgatcgcgat gctgaccgcc ttgtcctgtg
     6001 acggcccggt ttctgagagg ggtccagtga gttcgaggag tttgccgatg gtcagcgaaa
     6061 cctggtcggt cgccctagcc gaactcaatc cgcccaacaa cgccgcagcc atcatcgccg
     6121 tcagcaggga ccgacgtccg atcatctgac caccctccgc atcgtatgag gcggcgatcg
     6181 cgcgcctccg tttccaccta
//
LOCUS       DATMQB010000424         2749 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4537149, whole genome shotgun sequence.
ACCESSION   DATMQB010000424 DATMQB010000000
VERSION     DATMQB010000424.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2749)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2749)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2749
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4537149"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..627
                     /locus_tag="VNY79_12065"
     CDS             <1..627
                     /locus_tag="VNY79_12065"
                     /inference="COORDINATES: protein motif:HMM:NF013648.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX73230.1"
                     /translation="IGGRLADTAETLRTLGGLLDSRERAEKLAGYAAAVIAEVQKQTA
                     KIPPADRRSIYIARGPHGLESAVAGSIGSEVVDLVGANNVVSADTGPRTIVDVSPEQI
                     LAWQPDVILTIDRRFHTAIRTDPVWREVKAVQTGHVHFVPDLPFSWLDNPPAPNRLIG
                     LLWLGHLLYPAAFPQDIRAEVRRFYALFYQQEPSDAQLDSLFAEPSPG"
     gene            659..1651
                     /locus_tag="VNY79_12070"
     CDS             659..1651
                     /locus_tag="VNY79_12070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018902726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HWX73231.1"
                     /translation="MIGAVLALVLLVGIAVILGPYRIAPANLIAFLIAKLTGAASPLP
                     ASAEAVILQIRLPRIFAAMAIGAALAASGAAYQSLFRNPLVSPDILGVSSGAALGAVI
                     GIFFSLPILAIEATSFCGGLAAVLIVYGIAAAIPGRDAVLVLVLAGVVIGALFGAGVG
                     LLKFLADPYNQLPAITFWLLGSLAATHPADLTSLLPAVAIGLVPLGLLRWRIDVMTLG
                     DEEATALGVNTRVLRIVVIAAATLMTSAAVAASGIIGWVGLVVPHLTRLIVGPAFTRL
                     MPVSVLFGACYLLAVDTVARTLGSVELPLGVLTAALGTPVFLWLLAFSRRPAWS"
     gene            1669..2448
                     /locus_tag="VNY79_12075"
     CDS             1669..2448
                     /locus_tag="VNY79_12075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73232.1"
                     /translation="MEDLSYGYPGRAVGQHVNFAVAPGEVLCVLGRNGEGKSTLFKTI
                     LGLLPPLAGTVRVDGEPTSSWNSRRRALTFGYVPQSGAGAFPFTVREIVLMGRTAHRG
                     AFTAPSTADRQAAAMAIDTLGIEHLTEREWVRVSGGERQLALVARALAQEPRILILDE
                     PTASLDFGNQMRVLDAVRMLVETRALTVLLSTHHPEQAFACADKVAVLAGGELLRLGR
                     PADVITTETLHACYSVDVAVLPVADGRYRVCVPHSYLEHNG"
     gene            complement(2452..>2749)
                     /locus_tag="VNY79_12080"
     CDS             complement(2452..>2749)
                     /locus_tag="VNY79_12080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018272304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="xanthine dehydrogenase family protein
                     molybdopterin-binding subunit"
                     /protein_id="HWX73233.1"
                     /translation="EEYIYDKQGRLENPGFLDYRCPVASDMPMIDPVIVEVPNPRHPF
                     GVRGVGEVPIVPPMAAVANAIHAAIGTRLRDLPMSPPKILAEIDAEEPKRLAAE"
BASE COUNT          396 a          883 c          887 g          583 t
ORIGIN      
        1 atcggcggcc gccttgccga tactgctgaa acattgcgca ctctcggcgg acttctcgat
       61 agtcgggagc gtgccgagaa gctcgccggc tacgccgctg cggtgatcgc agaagttcag
      121 aaacagactg caaaaatccc acctgctgac cgccggagca tctatatcgc gcgcggcccg
      181 catggtctcg aaagcgccgt cgccggttcg atcggcagcg aggtcgtcga tctcgtcggc
      241 gcgaacaacg ttgtcagcgc ggataccggc ccgcgcacga tcgtcgatgt ctcgccggaa
      301 cagatcctcg cctggcagcc cgacgtgatc ctgaccatcg atcgtcgctt ccatactgcg
      361 atccgcaccg acccggtctg gcgcgaggtc aaggcggtgc agaccggcca cgtccatttt
      421 gtgcccgatt tgccgttctc atggctcgac aatcctccgg cgcccaaccg gctgatcggg
      481 ctgctatggc tcggccatct gctttatcct gcggcctttc cacaggatat ccgagccgag
      541 gtccgccgct tttatgctct cttttaccag caggagccga gcgacgccca gctcgacagc
      601 cttttcgcgg aaccgtcgcc gggttgacct tccgtcggct ctcacctgtc aggtggtggt
      661 gatcggtgcg gtgttggctc tggtactgct ggttgggatc gccgtcatcc tcggacctta
      721 ccggatcgca cctgcgaacc tgatcgcgtt tctgatcgcc aagttgaccg gtgccgcttc
      781 gcccttgccg gcttcggccg aagccgtgat cttgcagatc cgcttgccgc ggatctttgc
      841 ggcaatggct atcggcgcgg cgctcgccgc ctcgggagca gcctatcagt cgctgttccg
      901 caacccgctg gtttcacccg atatccttgg tgtttcgtca ggcgccgcgc tcggcgcggt
      961 aatcggtatc tttttttcat tgccgatact ggcgatcgaa gcgacatcct tttgcggcgg
     1021 gctggcggcg gtcttgatcg tctacggaat tgctgcagca atcccgggac gtgacgcggt
     1081 gctggtgctg gtccttgccg gcgtcgtcat tggcgcgttg tttggtgccg gtgtcgggct
     1141 tctgaaattt ctcgccgacc cttacaacca gctgccggcg atcaccttct ggctgctggg
     1201 cagcctggcg gcgacacacc cggccgatct gacgagcctg ctgccggccg tggcgattgg
     1261 cctggtgccc cttggcctgt tgcgctggcg catcgacgtg atgaccttgg gcgacgagga
     1321 ggcgaccgca cttggcgtca atacgcgggt gctgcgcatt gtcgtgatcg ccgcggccac
     1381 cctgatgacc tcggctgcgg tcgcggcgag cggtattatc ggttgggtcg gtctcgtcgt
     1441 gccgcatctg acgcgactta tcgtcgggcc ggccttcacg cgtctgatgc ctgtcagcgt
     1501 ccttttcggc gcctgttatc tgctcgccgt cgatacggtg gcgcgcactt tgggcagtgt
     1561 cgaactgccg ctcggcgtgt tgacagcggc gctcggcacg ccggtgttct tgtggctgct
     1621 cgccttcagc cgccgtccgg catggtcgtg agcgtaccgc gcctatcagt ggaggatctg
     1681 agctacggct atccggggcg cgcggttgga cagcatgtca atttcgccgt cgctcctggt
     1741 gaggtgctgt gcgtgctcgg acgaaacggc gaaggcaaat cgacattgtt caagacgatc
     1801 ctcggcctgc tgccgcctct cgccggtacg gtgcgcgttg atggcgaacc tacgtcgagc
     1861 tggaattcgc gccggcgcgc gttgactttc gggtatgtgc cgcagagcgg cgccggtgcc
     1921 ttccccttta ccgtgcgcga gatcgtattg atggggcgta ccgcgcatcg cggcgccttt
     1981 acggctcctt cgactgccga tcgccaagcc gcggcaatgg ctatcgatac cctgggcatt
     2041 gaacatctca ccgaacggga atgggtacgc gtcagcggcg gcgagcggca gctcgcgttg
     2101 gtcgctcgcg ccctagcgca ggagccgcgg atcctaatcc tcgatgagcc gactgcgagc
     2161 ctcgatttcg gcaaccagat gcgggtactc gatgccgtcc gtatgcttgt cgagactcga
     2221 gcactgaccg tgctgctctc gacccaccac ccggagcagg ccttcgcgtg cgcagacaag
     2281 gtcgcagtgc tggccggcgg agagctgttg cggctcggga ggccggctga cgtgattacc
     2341 accgagacat tgcacgcgtg ctattcggtc gatgtcgcgg ttttgccggt ggcggacggc
     2401 cggtaccgcg tttgcgtgcc gcactcctat cttgaacaca acggctaggc ctcattcggc
     2461 ggcgaggcgc ttgggctcct cggcgtctat ctcggcgaga atcttgggcg gcgacatcgg
     2521 caggtcgcgc agccgcgtcc caatcgcggc atggatcgcg ttggcgaccg cggccatcgg
     2581 cggcacgatc ggcacctcgc cgacaccgcg gaccccgaac ggatggcgcg ggttcggcac
     2641 ctcgacgatc acgggatcga tcatcggcat gtcggacgcg accggacagc ggtagtcgag
     2701 aaacccgggg ttctcgagcc ggccctgctt gtcgtagatg tattcctca
//
LOCUS       DATMQB010000425         7165 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1153164, whole genome shotgun sequence.
ACCESSION   DATMQB010000425 DATMQB010000000
VERSION     DATMQB010000425.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7165)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7165)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7165
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1153164"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..816
                     /gene="accD"
                     /locus_tag="VNY79_12085"
     CDS             <1..816
                     /gene="accD"
                     /locus_tag="VNY79_12085"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase, carboxyltransferase
                     subunit beta"
                     /protein_id="HWX73234.1"
                     /translation="GQLVFYKDVEANQFVIPGSNYHMRMSAGARLKSMFDNETWFDIA
                     VPEVPLDPLKFRDERRYADRLKDARSKTGLNDAIKLGYGKLDGLATVIAAQDFDFMGG
                     SLGMAAGEAVIKGLDTAVEKGCPFVLFAASGGARMQEGILSLMQMPRTTIAVERLHET
                     RRPYIVVLTNPTTGGVTASYAMLGDVHIAEPGALIGFAGPRVIEQTIREKLPEGFQRA
                     EYLRDHGMVDMVVHRRDLRATIARLCQLLMKAPTAAAPAAGLPQPHFSLPASA"
     gene            909..2183
                     /locus_tag="VNY79_12090"
     CDS             909..2183
                     /locus_tag="VNY79_12090"
                     /EC_number="6.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004326 - tetrahydrofolylpolyglutamate
                     synthase activity [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0008841 - dihydrofolate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0006730 - one-carbon metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="folylpolyglutamate synthase/dihydrofolate
                     synthase family protein"
                     /protein_id="HWX73235.1"
                     /translation="MHPKRIDLSLGRIQRLLPALGHPERRLPPVIHVAGTNGKGSTIA
                     FMRAILEAAGQRVHVYTSPNLVRLNERFRIGRAGGGKLVTDDELSGALAECEAANGEA
                     PITLFEIETAAAFLLFARHPADVLLLEVGLGGRLDATNVVERPLACVITRLALDHADF
                     LGGTIEQVAAEKAGILKRGVPAVVVSQPRDALAVVERQAARMRAPLSVAGEDWTATEE
                     RGRLVYQDSDGLLDLPAPKLYGRHQFENAGAAIAALRASGLKLPAPAFEAGMVRVDWP
                     ARMQRLTQGPLVGLLQPESELWLDGGHNPDCGRAIAAALADLEERVSRPLVLVVGMMA
                     TKDGEGFLRNFSGLARRVITVPIHQEKALPAAALAEIAQNAGIPALARDDVESALMVA
                     ARLELAPAPRVLITGSLYLAGEVLAANGTPPE"
     gene            complement(2546..3469)
                     /locus_tag="VNY79_12095"
     CDS             complement(2546..3469)
                     /locus_tag="VNY79_12095"
                     /inference="COORDINATES: protein motif:HMM:NF024946.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transporter"
                     /protein_id="HWX73236.1"
                     /translation="MATRLSILKASTFSYVQRRGDALAVLVALLVGCSTISAAAAQNG
                     GSGQSPTGPQQSGADPAALNYNGLDYTRPQQNANLRLQFRTSSAPTTQTERELLYLRL
                     TTKIDLPADWKLGLLGQAAFVGKETTSTAPPSTAREAGLGDSVFQAALLHTFDAHWAY
                     GFGARLVSPTAEDSLGNGKWEVMPGFGVRYSFLEINRETYFVPVLRWAVSFAGDPSRR
                     NINEPQIAPTLNIALPERWFVTFYPSNDIRINYGDPVAGQTGRLFLPFDAAIGRNITD
                     RVTAYLEMSVPMISNYPVYKFKTELRISVKF"
     gene            complement(3721..4713)
                     /locus_tag="VNY79_12100"
     CDS             complement(3721..4713)
                     /locus_tag="VNY79_12100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formylglycine-generating enzyme family protein"
                     /protein_id="HWX73237.1"
                     /translation="MGRETITDLVFVAGGTFRMGSDKHYPEEAPAHRVAVDGFWIDRT
                     PVTNRQFRKFVNETGHVTFAEIPPDAKDYPGALPEMLKAASLVFTPPKHPVDLRDWSQ
                     WWTFKAGANWRRPYGPRSSISGLDDHPVVHVACRDAEAYAKWAGKELPTEAEWEFAAR
                     GGLDSAEFAWGDDFTPGGQHRANTWQGDFPHENRCDDGFPRTSPVAAFPPNGYGIYDM
                     IGNTWEWTADWYAARHEVDAERPCCAPENPRGGREDQSYDPCQPEIRIPRKVIKGGSH
                     LCAPNYCRRYRPAARHAEAVDTSTSHLGFRCVVRKASEPWPKATEPHLTPPTAG"
     gene            complement(5032..5772)
                     /locus_tag="VNY79_12105"
     CDS             complement(5032..5772)
                     /locus_tag="VNY79_12105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015665374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73238.1"
                     /translation="MATDDRTPALLLDNVVKTYGPIRAVDGVSLKAFAGEFIALLGPN
                     GAGKSTLFQLLSGLFVPDSGRIEVMGHDMRRNPVPALAKLGIVFQQPTLDLELSLTGN
                     LLFHAGLHGLARAVAKSRIESELARLGLIKRARDKVAQLSGGNRRRVELARALLHEPR
                     VLLMDEATVGLDPASRNDLRKLILSLRAERSVAVLWATHLCDEVEDADRVIVLHHGKV
                     LADTTPAELVAKAGTATIEQAFLAMTGG"
     gene            5849..6817
                     /locus_tag="VNY79_12110"
     CDS             5849..6817
                     /locus_tag="VNY79_12110"
                     /inference="COORDINATES: protein motif:HMM:TIGR03866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PQQ-dependent catabolism-associated
                     beta-propeller protein"
                     /protein_id="HWX73239.1"
                     /translation="MRIFALALLCVLAIDPAAAKDTGLIFVSNEKSNDIIVIDPNSYK
                     VVNDIKVGRRPRDLHFNADHTKLYVACGDDDVITILDVATVKVTGKLKTGPSPEAFVI
                     DETRRRIYISQEEGSSLAIIDMDHDAILKEVPTGAEPEGVLLSDDGKILYVTSEAGDL
                     VHEVDTASAAITRDVVVGLRPRRFAATPDGKDLWVTGELSGAAYIVDRAKFVVAGSVP
                     FLPPGMRKADVTPVGIAMTKDGKTAYVALGHAAHVAIVDVAARKVLGYVLVGKRAWGL
                     TLSRDEKTLYVANGLGDDISIIDTASRKAKVSVPVGRVPYGIVVDE"
     gene            6810..>7165
                     /locus_tag="VNY79_12115"
     CDS             6810..>7165
                     /locus_tag="VNY79_12115"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73240.1"
                     /translation="MSSAGVISFLRSSGGGEAGRGVRLVLAFAALIALAGAPRALAQT
                     TPSAGQPEQHLKIGFVTIENDPRYEPLRAYERIILKTREHPLTGAEVGIDEATALKRV
                     LNTDFTLERIVAKSPA"
BASE COUNT         1227 a         2345 c         2325 g         1268 t
ORIGIN      
        1 ggccagctcg tgttctacaa ggatgtcgag gcgaaccagt tcgtcattcc cggctccaac
       61 tatcacatgc gcatgagcgc cggcgcgcgc ctgaaatcga tgttcgacaa cgagacctgg
      121 ttcgacatcg ctgtgccgga agtgccgctc gatccgctga agttccgcga tgagcggcgc
      181 tacgccgacc gtctcaagga tgcgcggagc aaaaccggcc tcaatgatgc gatcaagctc
      241 ggctatggca agctcgacgg tctcgcgacc gtgatcgccg cgcaggattt cgacttcatg
      301 ggcggttccc ttggcatggc ggcaggcgag gcggtgatca agggcctcga caccgcggtg
      361 gagaagggct gtccgttcgt cctgttcgcc gcctcgggcg gcgcccgtat gcaggagggc
      421 atcctctcgc tgatgcagat gccgcgcacc accatagcgg tcgagcgcct gcacgagacg
      481 cgccggccct atatcgtcgt cctcaccaat ccgacgaccg gcggcgtcac cgcctcctac
      541 gcgatgctcg gcgacgtgca cattgccgag ccgggcgcgc tgatcggctt cgccggcccg
      601 cgggtcattg agcagacgat ccgcgagaag ctgccggagg gttttcaaag agccgagtac
      661 ctgcgcgacc acggcatggt cgacatggtc gtgcatcgcc gtgatctgag ggcgaccatc
      721 gcgcggctat gccagctgct gatgaaggcg cccactgccg cggccccggc tgccggcctc
      781 ccgcaaccgc atttcagcct gccggcatcg gcgtgagcgc gccgggcgtc ggcggaggct
      841 ccggccccgc cgcctctgac gagccgggga agcaacgctg ggagcccgtc ctcgcccgac
      901 tgctggtcct gcacccgaag cgcatcgatc tctcgctcgg ccgcatccag cgcctcctcc
      961 ccgcgctcgg ccatccggaa cggcgcctgc caccggtgat ccacgttgcc ggcaccaacg
     1021 gcaagggctc gaccatcgcg tttatgcgcg cgatccttga ggctgcgggg cagcgcgtgc
     1081 acgtctacac ctcacccaat ctggtgcgcc tcaacgagcg cttccgcatc ggccgcgcgg
     1141 gcggcggcaa gctggtcacc gacgatgaac tttccggcgc gctcgccgaa tgcgaagccg
     1201 cgaacggcga ggcgccgatc accttgtttg agatcgagac ggcggcggcg tttctgctgt
     1261 tcgcgcggca tccggccgat gttctcctgc tcgaagtggg gctcggcggc cggctcgacg
     1321 ccaccaatgt cgtcgagcgc ccgctcgcct gcgtgatcac gcgcctcgcc ctggaccacg
     1381 ccgatttcct cggcggcacg atcgagcagg ttgccgctga gaaagccggc atcctcaagc
     1441 gcggggtgcc ggcggtcgtg gtgagccagc cgcgcgacgc gctggccgtc gtcgagcgcc
     1501 aagccgcgcg aatgcgagcg ccgctgtcgg tcgccggcga ggattggacc gcgaccgaag
     1561 agcgcggccg gctcgtctat caggacagcg acgggttgct cgacctgccg gcgccgaagc
     1621 tttacggccg gcatcagttc gagaacgccg gcgccgcaat cgcggcgctg cgcgcaagcg
     1681 gcctgaagct gcccgctccg gcattcgagg ccggcatggt ccgcgtcgac tggccggcgc
     1741 gcatgcagcg cctcacgcag gggccgctcg tcggcttgct gcagccggag agtgaactgt
     1801 ggctagatgg cggccacaat cccgactgcg gccgcgccat cgccgcggcc ctcgccgacc
     1861 tcgaagaacg ggtgtcgcgg ccgctcgtcc tcgtcgtcgg catgatggcg accaaagacg
     1921 gcgaaggatt tctgcgcaat ttctccggcc tcgcgcgccg cgtcatcacg gtcccgattc
     1981 atcaggagaa ggcgctgccc gcggccgcct tggcggaaat cgcccagaat gccggcattc
     2041 ccgcgctcgc ccgcgatgat gtcgaaagtg cgcttatggt ggccgcgagg ctcgaacttg
     2101 ccccggcgcc gcgcgtcctc atcaccggct cgctgtacct cgccggcgag gtcttggccg
     2161 ccaacggcac gccgccggag tgagtattgc cggttgtacg gagcgaaatc cgagcggcag
     2221 ttctgcaagg ctctgagcgt ttgttgccga tatgtcttca taattccgcc tagttcgccc
     2281 attcaactgc ttgccgggtt gtcgggtact ttgagtgtga gggtacccat gtcgtacagg
     2341 cagatagtca agcgctatga cgccgccgag attttgatgc tgacgagtgg cgtcatcctg
     2401 gtcgttgcca tcgtgttcgc gatccagtgg tagcaatcct cagagctcaa gcgttttagc
     2461 gtccgagtgc cctggcgagc gagtgcgccg acacagcccc ggtcttcggg gctttttgtt
     2521 ttggagaccc ccagtccctt gcggctcaga actttaccga gatgcgcagc tcggtcttga
     2581 acttgtaaac gggatagttg ctgatcattg ggacactcat ttcgagatag gcggtgacgc
     2641 ggtccgtgat gttacggccg atcgccgcat cgaacggcag gaacaacctg ccggtttggc
     2701 cggcgacagg atcgccgtaa ttgatgcgga tgtcgttgct tggatagaag gtgacgaacc
     2761 aacgttccgg cagggcgatg ttcagagtgg gagcgatctg cggctcattg atatttcgcc
     2821 gcgatggatc accggcaaaa cttaccgccc aacgcaagac cggtacgaaa taggtttccc
     2881 gattgatctc gagaaacgaa tagcgcacgc caaaacccgg catgacctcc cacttgccgt
     2941 ttccgagcga atcctccgca gtgggagaca cgaggcgcgc gccaaatcca taagcccaat
     3001 gtgcgtcgaa ggtgtgaagg agtgcggcct gaaaaaccga atctcctagt ccggcctcgc
     3061 gggcggtgct cggcggggcg gtgctcgtcg tttccttgcc gacaaacgct gcctggccca
     3121 ggaggccgag cttccagtcc gccgggaggt cgatcttcgt ggtcagcctc aaatacagca
     3181 gttctctctc ggtttgagtg gtgggcgccg atgatgtcct gaactggagg cgcaaattgg
     3241 cattctgctg cgggcgtgta tagtcgagac cgttgtagtt gagcgcggcc ggatcagcgc
     3301 cggactgctg cggcccggtc ggcgactggc cgctcccgcc gttttgcgcc gccgctgccg
     3361 agatagtgct gcatcccacc agcagggcga ccaacaccgc caacgcgtcg ccgcggcgct
     3421 gaacgtacga gaacgtcgaa gccttcagga tcgagagcct cgttgccatc gcgcaagctc
     3481 tccgccgcaa tcaccaaggc gcgcgctcat tctagccgct gccgacaatt ccggcgaccg
     3541 caatcggcga cggcccagtc gccggtgcca tgaaccattg ctatggctga cggccggcgc
     3601 acgtcagttg ctgggcacgg cttcaaagct cgcgctggcg gggcggatag tccttgaacg
     3661 tcgcgaggaa ttggccgacg atcgccggcc ccgccacggt cacgccggca ccgtccgaca
     3721 tcagccagcc gtaggtggtg ttagatgtgg ctccgtagct ttcggccatg gctcgctcgc
     3781 ttttcgaacg acgcacctga atccgagatg gctcgtcgac gtatcgaccg cttccgcatg
     3841 gcgcgcggcc gggcgatagc gacggcagta gttcggcgcg cataggtgcg agccgccctt
     3901 gatgaccttg cggggtattc tgatctccgg ctggcatgga tcgtagcttt gatcctcgcg
     3961 accgccgcgc gggttctctg gagcacagca cggcctttct gcgtccactt catgccttgc
     4021 cgcgtaccag tcggcggtcc actcccaggt attgccgatc atgtcgtaga tgccatagcc
     4081 gttcggcgga aacgccgcga ccggggaagt gcggggaaag ccgtcgtcgc aacgattctc
     4141 gtgcggaaag tctccctgcc acgtattggc gcggtgttgc ccgccgggtg tgaaatcgtc
     4201 gccccaggcg aactcggcgc tgtcgagccc accgcgcgcg gcaaactccc attcggcttc
     4261 agtcggcaat tccttgcccg cccatttcgc gtaggcctcc gcatcgcggc aggcgacgtg
     4321 gacgaccgga tgatcgtcga ggccactgat cgagctgcgc ggtccgtagg gccggcgcca
     4381 gttggcgccg gccttgaacg tccaccattg cgaccagtcg cgcagatcga ccggatgttt
     4441 gggcggagtg aaaaccaggg aggccgcttt cagcatttcc ggaagcgcgc cgggatagtc
     4501 cttagcgtcc ggcggtattt ccgcgaacgt gacgtggccg gtttcgttga cgaatttgcg
     4561 gaactgccga ttggtgaccg gcgtacggtc gatccagaag ccgtcaacgg caacgcggtg
     4621 ggccggcgcc tcttccgggt aatgcttgtc cgagcccatg cggaaggtgc cgccggccac
     4681 aaagacaaga tcggttattg tttcccgacc cactgaacgc cgcccctgag ccgcgccttt
     4741 ccaactcgtt gcacgcgaga aagcatgatc actgaagcag caatagggcg aagcccgtcg
     4801 aaagtccgcg acgtcgcagc gcgagcggtc agtattgctg acaggttgcc gatagaaact
     4861 gtccgcttgt cataaaaagc ggtcgatggc gacgctaaag caagaggaaa tgcaatcgcc
     4921 acaaacaagg acgcaccgaa ctgcaatgtg actggtgtct ggtctgcctt acggatcctc
     4981 ggcaattcgg cggccaagag tatcgggtct taccttcggc ctggtcccgg ttcacccgcc
     5041 cgtcatcgcc agaaacgcct gctcgatcgt tgccgtcccg gctttggcga caagctctgc
     5101 cggcgtggtg tcggccaaaa ccttgccgtg atggagcacg atgacgcgat cggcgtcctc
     5161 cacctcgtcg cacagatgcg tcgcccagag cacggcgacg gagcgttcgg cacgcaggct
     5221 gaggatcagc ttgcgcaggt cgttgcggct ggcgggatcg aggccgaccg tggcctcgtc
     5281 catgagcagc acccgcggct cgtgcaggag cgcgcgcgcg agctccacgc ggcgacggtt
     5341 gccgccgctc aactgcgcga ccttatcgcg cgcgcgcttg atcagtccga gccgggccag
     5401 ctcgctttcg atccgggact tcgcgactgc gcgcgcaagg ccgtggagtc cggcatggaa
     5461 caggaggttg ccggtcagcg acagttcgag atcgagcgtc ggctgctgga agacgatgcc
     5521 gagcttcgcc agggccggca ccggattgcg ccgcatgtcg tggcccatga cttcgatgcg
     5581 gccggaatcc ggcacgaaca gcccggaaag gagctggaac agcgtgctct tgccggcgcc
     5641 gttcgggccg agcagcgcga tgaactcgcc ggcgaacgcc ttgagactga ccccgtccac
     5701 cgcgcggatc gggccgtagg tcttgacgac attgtcgaga agcaatgccg gcgtccggtc
     5761 gtccgtggcc attcgtctcg tgctccttgc cttgcctgcc gtccttttta cggcttaggt
     5821 tgggagcgac gcaaatgaag gccctgcaat gcgcattttc gctctcgcgc tcctctgcgt
     5881 gctcgcgatc gatccggccg cggccaagga taccggcctg atcttcgtca gcaacgagaa
     5941 gagcaacgac atcatcgtca tcgatcccaa ttcctacaag gtggtcaacg acatcaaggt
     6001 cgggcggcgc ccgcgcgacc tgcatttcaa tgccgaccac accaagctct acgtcgcctg
     6061 cggcgacgac gatgtcatca cgattctcga cgtggcgacg gtgaaagtca cgggcaagct
     6121 caagaccggg ccgagcccgg aggcattcgt catagacgag acgcggcggc gcatctacat
     6181 ctctcaggaa gaggggtcgt cgctcgccat catcgacatg gaccacgacg cgatcctgaa
     6241 ggaagtgccg accggcgccg agcccgaagg cgtgctgctc agcgatgacg gcaagatcct
     6301 ctacgtcacc tcggaggccg gcgacctggt ccacgaggtg gataccgcga gcgccgcgat
     6361 cacccgcgac gtggtcgtcg gcctgcgccc gcggcgcttt gcggcgacac ccgacggcaa
     6421 ggacctttgg gtgacagggg agctttccgg cgccgcctac atcgtcgacc gcgccaaatt
     6481 cgtcgtcgcc ggcagcgtgc ctttcctgcc gccggggatg cgcaaggccg acgtgacgcc
     6541 ggtcggcatc gccatgacca aggacggcaa gaccgcctac gtggcgctgg gacacgcggc
     6601 gcatgtcgcc atcgtcgacg tggcggcgcg caaggtgctg ggctacgtcc tcgtcggtaa
     6661 gagggcctgg ggcctgacgc tctcgcgcga cgagaagacg ctctacgtcg ccaacggcct
     6721 cggcgatgac atatccatca tcgacaccgc aagccgcaag gcgaaggtct cggtaccggt
     6781 tggccgcgtt ccctatggca tcgtcgtcga tgagtagcgc cggcgtgatt tcgttcctgc
     6841 gctcctcggg cgggggcgag gcggggcgcg gcgtgcggct cgtcctcgcg ttcgccgcct
     6901 tgatcgcgct tgccggcgca ccgcgggcgc tggcgcaaac cacgccgtcg gcgggccaac
     6961 ccgagcagca cctcaagatc ggcttcgtca cgatcgaaaa cgatccgcgt tacgagccgc
     7021 tgcgagccta tgagcgcatc atcctcaaga cccgcgagca cccgctgacc ggagcggagg
     7081 tcgggatcga tgaggcgacg gcgctcaagc gcgtgctgaa cacggatttc acgctcgaac
     7141 gtattgtcgc aaaatcgccc gccga
//
LOCUS       DATMQB010000426        18422 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1153503, whole genome shotgun sequence.
ACCESSION   DATMQB010000426 DATMQB010000000
VERSION     DATMQB010000426.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 18422)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18422)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18422
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1153503"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            485..1438
                     /locus_tag="VNY79_12120"
     CDS             485..1438
                     /locus_tag="VNY79_12120"
                     /inference="COORDINATES: protein motif:HMM:NF021508.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2235 domain-containing protein"
                     /protein_id="HWX73241.1"
                     /translation="MPRNILIFSDGTGQAGGLTPDERISNIYKLYRATRIGPESPVNP
                     GEQLAYYDAGLGSRPPSGGVIETLFRMAHNFLSQATGFGLTTNIIDCYEMLIQLWRPG
                     DRIFLFGFSRGAYTVRCLAGVLAHCGIPTLLESGAPMKYDEATARRLAKIAVKKIYQH
                     AASVPRGRATPRENELMDQRLVLARLFREAYGSRQDDGSDYPYFIGVFDTVAAIASRG
                     SLLVLALATAVIAVIAATLLFLSRDRSLCGAICLRRVCGRGRIHSLCAGPVVAVVPRS
                     VRRNLSDRVRLVCHPAGQVRAGGRPETALAHAHHLVRAHEL"
     gene            1428..1655
                     /locus_tag="VNY79_12125"
     CDS             1428..1655
                     /locus_tag="VNY79_12125"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73242.1"
                     /translation="MSFEDKTLNDNVPYARHAISIDENRAAFARVGWGDLHSTRPDKD
                     ADGFHLHRSYRGCNCQPHRYGLNVSTLISTK"
     gene            complement(1792..2004)
                     /locus_tag="VNY79_12130"
     CDS             complement(1792..2004)
                     /locus_tag="VNY79_12130"
                     /inference="COORDINATES: protein motif:HMM:NF012596.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HWX73243.1"
                     /translation="MPQITIAAMETLAVGAGVAIALACDWRVLARDAYLYVPEVKIGL
                     NLQWGALPRLITLVGPGAACARCRRR"
     gene            complement(3293..3382)
                     /locus_tag="VNY79_12135"
     tRNA            complement(3293..3382)
                     /locus_tag="VNY79_12135"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(3346..3348),aa:Ser,seq:cga)
     gene            3787..4671
                     /locus_tag="VNY79_12140"
     CDS             3787..4671
                     /locus_tag="VNY79_12140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73244.1"
                     /translation="MFQTEWPVLLVDDDPDVLAVSKLAMKSFEIDGVPIKLFTATSKD
                     EAVKLLSGPLGSTALPYVSVAFIDVVMETDHAGLDLCRYIRETQMNRMTTIYVRTGQP
                     GLAPERDVIDRYDINGYFSKAETTEDKLYSLVKAGIRQFDFASMTVLEFQVIGSAMAA
                     GGSVEGLQRAIGEALGQIPMDPTGAPTRLGGYDIRVGLFEGDRLLGGNYNPAEAVAER
                     DRLIRLGLKPLNKSGDGYVQDGHHHLVKAAATDTHGDVWHLGRFPGVPSPGDTLILLN
                     FTKALASIFHNAAAATRH"
     gene            4811..6031
                     /locus_tag="VNY79_12145"
     CDS             4811..6031
                     /locus_tag="VNY79_12145"
                     /inference="COORDINATES: protein motif:HMM:NF014567.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HWX73245.1"
                     /translation="MTAETFLASVPLFAALAADHLRSIAAAGRTKTVATGETVFREGD
                     ASDGLYIVLSGKVRIYKQSDDGNEVDLHTGAAGEYFGELALIDGGPRSASVASLAPCE
                     FFVLEWETFLSLLTQSPQLLATTLANLSQAVRATSERVFREALQQQAIRSEMELARYR
                     SLAQMVAGVAHEINTPLGTVNTATSVVKGRLNAPVFAPLAGDPKARAAIEDVREAIDL
                     IEGNIRRAHKLVQDFKQLSVGQIRDTKEMLDLVAVVEEVVGLFKINARQAKLTIELRN
                     DLPDAAARAWFGYRGYLSQVLLNLLSNIERYAYPDGQGGRVEIAVAADSRRTDEWFVV
                     TVSDFGRGIAADDLPRIFEPFFTTGRSKGGTGLGMAIVQNIVTTALKGQIELASAPGS
                     GTKVTLRFPRTIAD"
     gene            complement(6066..6419)
                     /locus_tag="VNY79_12150"
     CDS             complement(6066..6419)
                     /locus_tag="VNY79_12150"
                     /inference="COORDINATES: protein motif:HMM:NF037472.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rap1a/Tai family immunity protein"
                     /protein_id="HWX73246.1"
                     /translation="MTSFRLSAAVLFAIFATAAQADPPANPRALSATTYLRGCKDFVA
                     GRSNFFSGRCVGVVEVLDAANADSKTFCAPPETNNLQRVRAIVAYIETHPDRGAEDFR
                     LLANEAMAKAWPCKT"
     gene            complement(6454..7245)
                     /locus_tag="VNY79_12155"
     CDS             complement(6454..7245)
                     /locus_tag="VNY79_12155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009737108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HWX73247.1"
                     /translation="MTQTDKMLSRKEGGVGIVTFNNPERHNAVSLDMWEATKRILDDF
                     AADEEVRVVVLTGAGGKAFVSGADISKFASERASLEDTRTYNIKTEAAFVGIYEFPKP
                     TIAMIRGYCIGGGLGLATCCDLRICSDNSRFAVPAAKLGLGYGYGGLKRLIDVVGHSS
                     AKEIFYTARQFNAQEAYDMGLVNRVVPAAELEGAVKNITDMICANAPLTIEAVKFTAG
                     EILKDESKRNVARVNEMVEQCFASRDYTEGRTAFMEKRKPAFTGT"
     gene            complement(7263..8462)
                     /locus_tag="VNY79_12160"
     CDS             complement(7263..8462)
                     /locus_tag="VNY79_12160"
                     /EC_number="2.8.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HWX73248.1"
                     /translation="MPFPRASKALTRFTVLDLTRVRAGPTCARQLADWGANVIKIEAP
                     PGPEEPMGGPREGSDFQNLHRNKRSVTLNLKAPEGLAAFKRMVRKADVVVENFRPGVK
                     KRLGIDYKALARINPRLVYASISGFGQDGPYADRPGFDQIAQGMGGLMSITGLPGNGP
                     VRVGIPVADLSAGLFAALGILVALLEREKSGKGQQIATSLLQAQIFMLDFQAARFLVE
                     SEVAQQAGNNHPTNIPTGVFKTRDGYINIAASGQRMWERLCRALDAEPLLHKPEYRTA
                     AARSDNRDALTADMESHLKNRSSAEWVDRLNHAGVPCGPIYSIAEVFADPQVRHLGMA
                     QSVSGNGKGKGKGKLRLVGQPVSLSRTPSRLAVRPPEAGEHTDAVLKEFGFSAREIAA
                     LHKAGAV"
     gene            8736..10259
                     /locus_tag="VNY79_12165"
     CDS             8736..10259
                     /locus_tag="VNY79_12165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015341261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase"
                     /protein_id="HWX73249.1"
                     /translation="MVDFRRTVLALLTAVAATAAFAQEQPGRPAGERGHAEPGRQEQN
                     APGVLSLLPGDAVTEHSIDTARGKLTYTATAGTFSLFDQSGERSAAIFYTAYVAKTNA
                     ERRPLTFVFNGGPGAASAFLHLGLVGPRVAEFGMAGHDGANVRLVDNPDTWLAFTDLV
                     LIDPVGTGWSRAARPDGAGAFWGVHRDAESMAKVIALYVGKNGRGSSPKYILGESYGG
                     FRAAKVAGDLQSDQGIAVTGILMVSPMLEGAFQFGGDRFALGAALQLPSLIATELERS
                     GTFSKEALEQAEHFALTEYLTTLAGPPPSGDAAKAFYARVAQMTGLPEEVVARSRGFI
                     RDAYVKNLRAGEHKIVSHYDATFAADDPHPETASPRGPDPLLDGVVRAYGGAFVGYAR
                     DELGFKTEMTYHLLASEISGKWDWHDGSGRAPPSAAEDLRELLALTPSFRLMIAHGYS
                     DMATPYAVSRYVLDHLPPSVEEERAELKLYRGGHMFYIDPQSRKAFTADARTMYPPP"
     gene            10256..11551
                     /locus_tag="VNY79_12170"
     CDS             10256..11551
                     /locus_tag="VNY79_12170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009031743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TMEM143 family protein"
                     /protein_id="HWX73250.1"
                     /translation="MSDVARQAGGDAADNRFVPVRKSDILEALIAHGGFADDAEREKF
                     RRLCAMIASIYHYEYFAALERLRSDYYYFNPEIAPHAALDHASLERAYADLVATLDTV
                     LKDANFVELPHAEIGAAHSGRSVLRVEVKAPLDDFREVRFYRRGRHVEPFEVAEWFGL
                     RRRKIEAEVYDDVVMIAAMKPQAEIGSRRELKALERRKMRPGSVLLKCFRNVASGDLN
                     ALFPNVRVVMSSVDKVFLGLPAIAGGIPILINIYTTITVLFLVLGFYLGVSATVEDKD
                     MKAALAALSGLVALGGFVLRQWVKYQRQSLRYQIELTDNIYYRNVNNNAGVFDYLIGA
                     AEEQECKEAFLAYHFLRTASAPPTADELAGCVGEWLRATFGVDVAFNVGEAAARLEEL
                     GLLTRHGGRLSVLPLDAALAGLHRAWDDFFPRAPQLAAQ"
     gene            11802..13064
                     /locus_tag="VNY79_12175"
     CDS             11802..13064
                     /locus_tag="VNY79_12175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX73251.1"
                     /translation="MIRPIAALDRRTVVKAGAALGLAQIAAPFVISARGETPIRIGVD
                     NPLTGTYAAPGKNENTGMLLAVDQLNAKNGILGRKIELQIEDSTSGDAGAAVQKARKL
                     IERDNVDFLVGNVNSALAQAMAQVSNEKGVLHIVPGGHTDGITGVNCKWNVFRVCNTT
                     RMEANSICPLLFSTYGKKWHFITPDYAFGHTLFEGCEANLKKLGGTVTGNELTPLGIT
                     DFSAYLIKARAANPDVLLVLVQGNDMVNCLKQISQFGIDKQIHVAGTQQELEPVEAMP
                     PEARVGIWMFEWYWKQPGNTPGLDQFIADVRKRSDGKVPTARTWFGYVTIHAYALACE
                     KAKTIEAKAVAKALADLEMPPEIKMQPNKVYFRGGDHQLMLSAFIGELMHKGDGDPEN
                     LFKVNHIVAGDSVAPPVSETGCTMQMPA"
     gene            13140..14009
                     /locus_tag="VNY79_12180"
     CDS             13140..14009
                     /locus_tag="VNY79_12180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX73252.1"
                     /translation="MLQLTFFNVTNGLIIGAFYALMAIGLSLILNLSGVINFAHGGFL
                     VIGGYLAYTLRPYIGFWGALLVAPFLTALIGLAVERLLIRRMYGRDPLYSLLLTFGLA
                     FIIEDATRQMWGANGLPFSVPEALTSPLSSEFFFITGYRMFMVAMVAIVVAILFVLLR
                     YTRIGVRIRAGTLDLETVSALGVNVRALRSLNFAVGIFLAGLAGVLAAGQIGLEPTMG
                     DGLLMPSFIAIIVGGVGSLTGTLLGGLLIGVASGLTAVVFPSASEAVIFVMMALVLLV
                     RPRGLLGEEGMMT"
     gene            14006..14977
                     /locus_tag="VNY79_12185"
     CDS             14006..14977
                     /locus_tag="VNY79_12185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002716559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX73253.1"
                     /translation="MTPDLQKRAAPWLHVAALAAIWAALIAAPFWMPLFGGYTALGSR
                     VLVLGLAAMSLNFLLGFTGVLSFGHAAWFGLGAYGAGFVLKWAVLSSPVAVIAGTLFG
                     GIVGALLGMLLVRRRGVYFAMVTIAFGQVFYYIAFQWSSVTGGDDGLRGFERQPLDFG
                     AFRVDLLHDDRAFYYFALVCFAIAVTLMAFILRSPFGRTMIAIRENERRARFLGIPIE
                     FHIWAAFSLSCFFMAFAGALYALLNNFADPRVFHYSLSGDFVIMAVMGGMRTFWGPLL
                     GAIVFVVLQDYISSVTVNWMSFIGMLIVLIVLFFPRGILGLVERRTA"
     gene            14974..15723
                     /locus_tag="VNY79_12190"
     CDS             14974..15723
                     /locus_tag="VNY79_12190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73254.1"
                     /translation="MSTLEVKSLTKRFGSLVAVRDVSMTVAKGELRAVIGPNGAGKTT
                     FFNLVSGFFAPTSGSILFEGRDVAGFSAHERVGMGMARTFQITEIFPELTVFENVRIA
                     AEVAAGYRLRPWLSRADTAELRRRVEETLALAGLTGKANRLVGELAHGDQRAAEIAMA
                     LALKPRLLLLDEPTAGMGDQETYEITQLVRRLHKDGNLTIVLIEHDMRVVFHLADRIT
                     VLDQGTFLAEGTPQEIATNDAVQTAYLGKAA"
     gene            15720..16442
                     /locus_tag="VNY79_12195"
     CDS             15720..16442
                     /locus_tag="VNY79_12195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73255.1"
                     /translation="MSAALKVEGLNTYYGKSHILHGVSLEAAEGKVTALLGRNGAGKT
                     TTLRSLMGLTPPREGRVSVFGRETTRWPPFRIAALGVGYVPEGRKIFPNLTVNENLMV
                     PLERPGPWTPESIYRLFPRLAERRSSRGRQLSGGEQEMLSIARALLINPKLLILDEPS
                     QGLAPLITREVFRIVAQMRTEGISVLLVEQNVRMSLEISDHAYVLDDGHVVYSGPARE
                     LAADQARVESLAGASAEEWTPH"
     gene            complement(16622..17053)
                     /locus_tag="VNY79_12200"
     CDS             complement(16622..17053)
                     /locus_tag="VNY79_12200"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73256.1"
                     /translation="MVAVLAACVAVAGCTSSPPSPEVAAAAENAPPAVAGGPQRDLTP
                     QEKRVIVDAIALSIRDAGSAKYRWAKFPVAAADKVNYCGTVDAKSPFPAYSGHQAYIV
                     EARVVGGRVSSAVVGLIAGGKDAALVSKMCAKYGLNPNDAT"
     gene            complement(17085..17891)
                     /locus_tag="VNY79_12205"
     CDS             complement(17085..17891)
                     /locus_tag="VNY79_12205"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73257.1"
                     /translation="MQEKLRFGRSPAWLTGLISLAILAGAGIFPALAQDADAAGAKPA
                     AAASGGGQYFVEFRARYAWDYGHTFIVHGRVGEPLTKASVAGLSPVGDDSTAWVIGHY
                     VPVPAETGWTDGDLEDKYISARYRVYMSKAQYDRVMVFVRQLQASKKVWSAELYNCNA
                     FVGDIAQFMGLRVPKSSLIYPRVFINNMRQINTHPGMADNLIEDNVKEMGSATRDGRS
                     MITTGIRTVHADRSTAPPPPPSGGPTVTIGRVHVTNSSADSVAAAVPSAQ"
BASE COUNT         3090 a         6062 c         5945 g         3325 t
ORIGIN      
        1 tcgcgtccaa acaggaactc aaggatcgga tcatggctgc catggactat ttcaatcagg
       61 agcccgtcgt tcacacctgg gcctataagc tcgacaaggc ggcctgatat gattcgaact
      121 tcgaaaacgc tggtctagtg aaaaggctga cagcctggcg tcggcagtcc tggtcggcgc
      181 ttgcggcggc ctcgtagccg tgccccgcaa tcacgcggag atcgtcctcg ctcacgccaa
      241 tcgtgaatct ccgaagtccg cggcgctctc attcgctcgg ccgacgtcgc catctccttc
      301 cggacgaggt agccacggaa ggggttcgta aggcctgaac gggcccgaag gggcgccaca
      361 tggcgctaag tatgcgctga ggccaggatt gcagtcagtc gctcatcagg ctgtaatcga
      421 cgaaagcctc gtcaccatgc gggctttctc gtgcaaaatt agttcggcgc agatggtaac
      481 gcaaatgccg agaaacatcc tgatcttttc cgacgggacg gggcaggcgg gcgggctcac
      541 gcccgacgag aggatcagca atatctacaa actctaccgg gcgacgcgga ttggcccaga
      601 gtcgccagtc aatccgggcg agcagcttgc ctattatgat gcgggtctcg gctcgcgacc
      661 gccgagcggc ggcgtgatag agaccctgtt tcgcatggcg cacaacttcc tgagccaggc
      721 gaccggcttc gggctgacca ccaacatcat cgattgctac gagatgctga tccagctctg
      781 gcgtccgggt gaccgcatct ttctgttcgg cttcagccgc ggcgcgtaca cggtgcggtg
      841 ccttgccggg gtgctcgccc attgcggcat ccccacgctc ctcgagagcg gcgcgccgat
      901 gaaatacgac gaagcgaccg cgcggcggct ggcaaagatc gccgtcaaga agatctatca
      961 gcacgcggcc tcggtaccgc gcggcagggc gacgccgcgc gaaaacgagc tgatggacca
     1021 gcggctcgtg cttgcccgcc tgttccgcga ggcctacgga tcgcggcagg atgacgggtc
     1081 cgactatccg tattttatcg gcgtcttcga cacggtcgcc gcgatcgcaa gccgcggctc
     1141 tctcctggtt ctcgcgcttg caactgcggt catcgccgtg attgccgcga ccctgctttt
     1201 tttatcccgc gatcggtctc tttgcggggc catatgcctc agacgcgttt gcgggcgcgg
     1261 ccgcattcat tcactttgcg ccggcccggt ggtggccgtg gttcctcgca gtgttcgccg
     1321 taatctttct gatcgtgttc gcctggtatg tcatccagca ggtcaagttc gcgccggagg
     1381 ccgacccgaa acggccctgg cgcacgctca ccatctggtt cgggcgcatg agctttgagg
     1441 acaagacgct caacgacaat gtcccctacg cgcggcatgc gatctcgatc gacgagaacc
     1501 gcgccgcgtt cgcgcgcgtc ggctggggcg acctccattc aacccggccg gacaaagatg
     1561 cggacgggtt tcaccttcat cgcagctatc gcggttgtaa ttgtcagcct catcggtatg
     1621 ggcttaatgt ttctacattg atatcgacaa agtaaaattg cgcatcctcc gatgagttga
     1681 tgatgcgccg tgcgcgaaca cgctgggcca gtacattagc tcgaaacaag cttctcgctt
     1741 tggcggcgcg cggcttgggt cgacgcagcg ctatttcatt gtgtgtctgc gtcaccgccg
     1801 ccgacaacgc gcacatgctg cgcctggacc gaccagcgtg atgagccgtg gcaaggcacc
     1861 ccattgcagg ttcaggccga tcttgacctc tggtacgtac aggtaggcgt cccgcgccaa
     1921 cacccgccaa tcgcacgcca gcgctatggc gacgcccgca ccaacggcca gcgtctccat
     1981 ggccgcgatg gtgatctgcg gcatcgcctc ccagagcctt ggcctccttt aggtcgagcg
     2041 tatcgaagcc ctcagtgaac cagccgtaga ccggagcgag aagctcgcga gcttcatccc
     2101 gcttcccctg gtcgcgccag agcccgcgcc atgctcattg cggcgcgcag ttcccaagac
     2161 ttcgcttctt gttggcgcgc aacggccagc gcacgcttag gatagcggcc gcgtcagact
     2221 gacgaggtac gatgtctctg gcgccttctt gcgctggtgt atttggagga cccgcccact
     2281 cggcctctgc gatgagtgcg gtggcgccgc tgccgttcgt cgcgcagttt gcctgcgggc
     2341 ttatcctcgt ggacttccca ccccagtcgt tcgcagagag caacaagcgt atccaggtca
     2401 gccaactgga gcggaatctc gccagtatgt cggtcgacgg cggcgtagat ataggtctcg
     2461 ccaggtctat cgattatctt aatgctgcga tgcataacgc atcagagaac gccgctcccg
     2521 aaaggtggtt ccgcggagac gcggtgactt tgacgcgggc gacacggtca gcgacgagcg
     2581 catccctcgc ggtcatggcg gggtccggtg gaaaaagtcg gagcagtcgc agccgatgaa
     2641 ggaagcttgc gaccatgcga agatcacgcc tgcgggtctc gttccacatc ccgcgccata
     2701 cctggcagta cgctggtgac ccgccgtctg cggctaacgt taagagaaag cgcggcaaca
     2761 ctcccgcaag cgaccatctc tcagtccgtc cactgggcgt cgcggatggg accttctttg
     2821 ttttgccgcg taaccgagtt tgtggcggaa aaatgctgtg aagcgctata atcggcgtta
     2881 ggagcttcgc ggcaaaaccc cccgacgccg gatcatgaac gcccggtcga cttcccaacg
     2941 tcgccaaaaa tctaaggcaa taccgccatc gcgatgttgg ccgccggccg ctgcggcaat
     3001 ccatgcgacc gcggcaccaa gcataagcga tgcgcctacc ataaaagcca aaataacggc
     3061 gcttcgtctg gcctttgcaa ccgcatcgct agacgaactg ctacgagcag agggtaaggc
     3121 gcgcaacgat ctgacaatgg tcgacaagcg cgaacctgac aacccaaaac ggaggcccgc
     3181 tggcggtcga gcgcgagcct tcgaaaggcg agggctatag aggctcccca catgggctgc
     3241 ggcatgggca aggtgccatt aagttagaaa atctagcgtt ttcaacacga tatggcggag
     3301 agggagggat tcgaaccccc gatacggttg cccgtacgcc gcatttcgag tgcggtgctt
     3361 tcaaccactc agccacctct ccgcaggctg acaagtcgac aaggtgatgg ttgagcgtcg
     3421 ccgtatttag cggccgtcaa cggtcgaaac aaggccgcaa ggcgaaagat cacccgcgtc
     3481 cgggacgccg ccgtgttcgc gtccgcgtca gcgcggccct cgggtagcgg cgagagcgcg
     3541 gtcctcggcc gccggcaaaa gcgtgccccg ggcgttggta aacgccgcct tgcacggtgc
     3601 aacgagccca ttgccgacac accttcggcc tggagccgag ggtcgcgcct atgtacagtt
     3661 gccgcgcgaa cagagcgggg gacgcggcaa gcgcaatcgg agggcgcagc cggccccacg
     3721 aatacggctg catgtttttt gggacggcga tcgtccactt caatcctgac agcggaggaa
     3781 acaggcatgt tccagaccga atggccagtc ttgctggtcg atgacgaccc tgacgtgctc
     3841 gcggtctcga aactggcgat gaagagcttc gagatcgacg gtgttccgat caaattgttc
     3901 actgccacca gcaaggacga ggcggtgaaa ttgctcagcg gcccgctcgg cagcacggcg
     3961 ctcccctatg tcagcgtcgc cttcatcgac gtggtgatgg aaaccgacca cgccgggctc
     4021 gacctctgcc ggtacatccg cgaaacgcag atgaacagga tgacgacgat ctacgtgcgc
     4081 accggccagc ccggcctggc gccggagcgc gacgtcatcg accgctacga catcaacggc
     4141 tacttctcca aggcggagac gaccgaggac aagctctact ccctggtcaa ggcgggcatc
     4201 cggcagttcg attttgccag catgacggtg ctcgagttcc aggtgatcgg cagcgccatg
     4261 gctgccggcg gctcggtcga aggcctgcag cgcgccatcg gcgaggcgct cggtcagatc
     4321 cccatggatc ctaccggcgc cccgacccga ctcggcggct acgacattcg cgtcgggctg
     4381 ttcgaagggg accgcttgct gggcggcaac tacaaccccg cggaagctgt ggcggaacga
     4441 gatcgtctca tccggctcgg gctcaagccg ctgaacaagt cgggggacgg ctacgtccag
     4501 gacgggcacc atcatctcgt caaggcggcg gcgaccgaca cgcacggaga cgtctggcat
     4561 ctcggccgct tcccgggtgt gcccagcccg ggcgacacct tgatcctgct gaacttcacc
     4621 aaggcgctgg cgtcaatctt ccacaacgcc gccgctgcaa cgcgtcactg aaggagtgcc
     4681 gatcggcttg atcgggtttg ggccggcttg gggcggcagc gcctgtctgg aaggatggga
     4741 cgctcgccgc tcctcgccgt gcctgatggg tcatcggctg cgccgcctat ccggggagtg
     4801 agccgtgccc atgaccgcgg aaaccttcct ggcgtcggtc cccttgttcg ccgcgctcgc
     4861 ggcggatcac ctacggtcga ttgccgccgc cggccgcacc aagacggtgg cgacgggtga
     4921 gaccgtcttc cgcgagggag acgcttccga tggcctctat atcgtccttt ccgggaaagt
     4981 ccggatctac aagcagagcg atgacggcaa cgaggtcgat cttcacaccg gcgcggcggg
     5041 cgagtatttc ggcgaactcg cgctgatcga cggcgggccg cgttcggcga gcgttgcgag
     5101 cctcgcgcca tgcgagttct tcgttctcga gtgggaaacc ttcctgtcgc tcttgaccca
     5161 atcgccgcag cttctggcca cgacgctcgc gaatctgagc caggcggtgc gcgcgaccag
     5221 tgaacgcgtg ttccgcgaag ccctgcagca gcaggcgatc cgcagcgaga tggaattggc
     5281 gcgataccgg tcgctcgcgc agatggtcgc cggggtggcg cacgagatca acacgccgct
     5341 cggcaccgtc aacacggcga ccagcgtggt caaggggcgt ctcaatgcgc cggtgttcgc
     5401 gccgctcgcg ggcgacccga aggcgcgcgc cgccatcgag gacgtgcgcg aggccatcga
     5461 cctgatcgag ggcaacatcc ggcgcgccca caagctggtc caggacttca agcagttgtc
     5521 cgtcggccag atccgcgaca ccaaggagat gctcgatctg gtcgcggtgg tcgaggaggt
     5581 cgtcggcctg ttcaagatca acgcccggca agcgaagctg accatcgagc tccgcaacga
     5641 cctgcccgac gcggcggcgc gggcctggtt tggctatcgc ggctatctta gccaggtcct
     5701 gctcaatctg ttgagcaata tcgagcgcta cgcctatccg gacggtcagg gcggcagagt
     5761 ggagatcgcc gttgctgcag acagcaggcg gaccgacgaa tggttcgtcg tcacggtcag
     5821 cgattttggg cgcggcatcg ccgccgatga cctgccgcgg attttcgaac ccttcttcac
     5881 gacggggcgc agcaagggcg gcaccggcct ggggatggcg atcgttcaga acatcgtcac
     5941 caccgccttg aaggggcaga tcgagcttgc gtccgcgccc ggctcaggca cgaaggtgac
     6001 gctgcgcttc ccgcggacga ttgccgattg atgccggctt cgcaacgtgg aggcggccga
     6061 cgtcgctaag tcttgcacgg ccaggccttg gccatggctt cattggccaa aaggcggaaa
     6121 tcctcggccc cccgatccgg atgggtctcg atgtaagcga caatggcccg cacccgctgc
     6181 aggttgttgg tctcgggcgg agcacaaaac gtcttgctgt cggcgttcgc cgcatcaaga
     6241 acctcgacta cgcccacgca acggccgctg aagaaattgg acctgcccgc tacaaaatcc
     6301 ttgcagccgc gcaaataggt ggtcgcgctc aaggcgcgcg gattggccgg cgggtctgcc
     6361 tgcgcagccg tggcgaatat tgcaaacagg acggcggcgg aaagtctgaa gctggtcatc
     6421 tgttcacgct cgcggtgcgt tgcggttggc acctcaggtg ccggtaaatg ccggcttgcg
     6481 cttctccatg aaagcggtgc ggccttcggt gtagtcgcgg ctggcgaagc actgctcgac
     6541 catttcgttc acgcgggcga cgttgcgctt cgattcatcc ttgaggattt cgccggccgt
     6601 gaacttgacc gcctcgatgg tgagcggcgc gttggcgcag atcatgtcgg tgatgttctt
     6661 caccgcgcct tcgagctcgg ccgcaggcac gacgcggttg accaggccca tgtcataggc
     6721 ttcctgcgcg ttgaactggc gcgcagtata gaagatttcc ttggcagacg aatgaccgac
     6781 gacgtcgatg aggcgcttga gcccgccgta gccgtagccc agcccgagct tcgccgccgg
     6841 caccgcgaag cgcgaattgt cggagcagat gcgcaggtcg cagcaggtgg cgaggccgag
     6901 gccgccgccg atgcaatagc cgcggatcat cgcgatcgtc ggcttgggga attcgtaaat
     6961 gccgacgaac gccgcctcgg tcttgatgtt gtaggtgcgg gtgtcctcga gcgaggcgcg
     7021 ttcgctggcg aatttggaga tgtcggcgcc ggaaacgaag gccttgccgc cggcgccggt
     7081 gagcaccacg acgcgcacct cctcgtcggc ggcgaaatcg tcgaggatgc gtttcgtcgc
     7141 ctcccacatg tcgagcgaca ccgcattgtg ccgctcggga ttgttgaagg tcacgatgcc
     7201 gacgccgcct tccttgcgcg agagcatctt gtcggtctgc gtcatccggt actcctgctt
     7261 ccttacaccg cgccggcctt gtgcagcgcg gctatttcgc gcgcggagaa gccgaattcc
     7321 ttgagcacgg catcggtgtg ctcgccggcc tccggcggcc gcacggcaag gcgcgaaggc
     7381 gtccgcgaca gcgagaccgg ctggccgacg aggcgcagct tgcctttgcc tttgcctttg
     7441 ccgttcccgc tcacgctctg cgccatgccg aggtgccgca cctgcggatc ggcaaaaact
     7501 tcggcaatcg agtagatcgg gccgcacggc acgccggcgt ggttgaggcg atcgacccat
     7561 tcggcgctgc tgcggttctt gagatggctt tccatgtcgg cggtgagcgc gtcgcggttg
     7621 tcggagcggg ctgcggcggt ccggtattcg ggcttgtgca gcagcggctc ggcgtcgagc
     7681 gcgcggcaga gccgctccca cattcgctgg ccgctcgcgg cgatgttgat gtagccgtcg
     7741 cgggtcttga acacgccggt cgggatgttg gtcggatgat tgttgccggc ctgctgcgcc
     7801 acttcgcttt ccacgaggaa gcgcgcggcc tggaaatcga gcatgaagat ttgcgcctgc
     7861 aggagcgagg tcgcgatctg ctggcccttg ccggactttt cccgctcgag gagggcgacg
     7921 aggatgccga gcgctgcgaa cagtccggcg ctcaagtcgg ccaccggaat gccgacgcgc
     7981 accggcccgt ttcccggcag gccggtgatc gacatcagcc cgcccatgcc ctgcgcgatc
     8041 tggtcgaagc cgggccggtc agcgtaaggc ccatcctggc cgaagccgga gatgctggcg
     8101 tagacgaggc gcggattgat gcgcgccagc gccttgtagt cgatgcccag gcgcttcttc
     8161 acgccgggcc ggaaattctc cacgaccacg tccgccttcc tcaccatgcg cttgaacgcg
     8221 gcgaggcctt ccggcgcctt gagattcagc gtcacgctgc gcttgttgcg gtgcaggttc
     8281 tggaagtcgg agccctcgcg cgggccgccc atcggctctt ccggcccagg cggtgcttcg
     8341 atcttgatga cgttggcgcc ccagtcggcg agctggcggg cgcaagtcgg cccggcccgc
     8401 acgcgggtga ggtcgaggac ggtgaaacgg gtcagggctt tcgacgcccg cgggaacggc
     8461 attcggcgac tccagcgccc cgcgtccggt cgaagggcga cggcctcagg gctgcggcga
     8521 tcgatccttc gcggccgcgc ggcgcgcggg cgctccgatc acgggcgcac ggccattggg
     8581 gccgagaact tccccgatcc tgtcgcggtt gtctaccggc acgcgaggcg tgccggccgg
     8641 cgctccatct tgcggagcgg ggcggccgac agccatcttt ccggcactat cgccggacga
     8701 tgtggatgca ctcagtttca taaggaacaa aacagatggt cgattttcgc cggaccgtcc
     8761 tcgcgctgct gaccgcggtc gcggcgacgg cggcattcgc gcaggagcaa cccggacgcc
     8821 cggccggcga gcgcggtcat gcggagccgg ggcggcagga gcagaacgcg ccgggcgtgc
     8881 tctcgctgtt gcccggggac gcggtcaccg agcacagcat cgacacggcg cgcgggaagc
     8941 tgacgtatac cgcgaccgcg ggcacgtttt cgctgttcga tcaatcgggc gagcgttcgg
     9001 ctgcgatctt ctacaccgcc tatgttgcca agacgaacgc cgagcggcgg ccgctgacct
     9061 tcgtgttcaa cggcgggccg ggcgccgctt cggccttcct tcatctcggc ctcgtcggtc
     9121 cgcgcgtcgc cgagttcggc atggccgggc acgacggcgc caatgtccgc ctcgtggaca
     9181 acccggacac ctggctcgcc ttcaccgatc tcgtcctcat cgatccggtc ggcaccggct
     9241 ggagccgggc ggcgaggccg gacggcgccg gcgccttctg gggcgtccac cgcgatgccg
     9301 aatcgatggc caaggtgatc gcgctctacg tcggcaagaa cggccgcggc agctcgccga
     9361 agtacatcct cggcgaaagc tacggcggct ttcgcgccgc caaggtcgcc ggcgatctgc
     9421 agagcgacca gggcatagcg gtgaccggca tcctcatggt gtcgccgatg ctcgaaggcg
     9481 cgttccagtt cggcggcgac cggttcgccc tcggcgccgc cctgcaattg ccgtcgctca
     9541 tcgccaccga gctcgagcgc tcgggcacct tcagcaagga ggcgctggag caggccgagc
     9601 atttcgcgct gaccgagtat ctgaccacgc tcgccgggcc gccgccgagc ggcgacgccg
     9661 cgaaagcgtt ttacgcgcgg gtcgcgcaga tgaccggatt gccggaagag gtcgtcgccc
     9721 ggtcgcgcgg ctttatccgc gacgcctacg tcaagaacct gcgggcgggc gagcacaaga
     9781 tcgtcagcca ctacgatgcg acgttcgcgg ccgacgatcc tcatcccgag acggccagtc
     9841 cgcgcgggcc cgacccgctg ctcgacggcg tggtgcgcgc ttatggcggc gcctttgtcg
     9901 gctacgcgcg cgacgaactc ggcttcaaga ccgagatgac ctaccacctg cttgcctcgg
     9961 aaatctccgg caaatgggac tggcacgacg gctccgggcg cgcgccgccg agcgccgccg
    10021 aagatctgcg cgagctgctc gcgctcaccc cgtcgttccg gctgatgatc gcccacggct
    10081 acagcgacat ggcgacgccc tacgcggtct cgcgctacgt gctcgaccat ctgccgccgt
    10141 cggtcgagga ggaacgcgcc gagctcaagc tctatcgcgg cggccacatg ttctacatcg
    10201 atccgcagtc gcgcaaggct ttcaccgccg acgcccgcac gatgtacccg ccgccatgag
    10261 cgacgttgcg cggcaggccg ggggcgacgc cgccgacaac cggttcgttc cggtgcgcaa
    10321 gagcgacatt cttgaagcgc tgatcgcgca cggcggattt gccgacgacg ccgagcggga
    10381 aaaattccga cggctgtgcg cgatgatcgc ctcgatctat cactacgagt atttcgcggc
    10441 gctcgagcgc ctgcgcagcg actattacta tttcaacccc gagatcgcgc cgcatgcggc
    10501 gctggaccac gcgtcgctcg aacgcgccta cgccgatctc gtggccacgc tcgacacggt
    10561 gctcaaggac gcgaacttcg tggagctgcc gcatgcggag atcggtgcgg cgcacagcgg
    10621 gcgcagcgtg ctgcgcgtcg aggtcaaggc gccgctcgac gatttccgcg aggtacgttt
    10681 ctaccggcgc ggccggcacg tcgagccttt cgaggtcgcc gaatggttcg ggctgcgccg
    10741 gcgcaagatc gaggccgaag tctacgacga cgtcgtcatg atcgcggcaa tgaagccgca
    10801 agccgagatc ggctcacggc gcgagctgaa ggcactcgaa cggcgaaaga tgcggccggg
    10861 ctcggtgctg ctcaaatgct tccgcaacgt cgccagcggc gatctcaatg cgctgtttcc
    10921 caatgtgcgc gtggtgatga gcagcgtcga caaggtgttc ctcggtcttc cggcgatcgc
    10981 cggcggcatt ccgatcctga tcaacatcta caccaccatc accgtgctgt tcctcgtgct
    11041 cggcttctac ctgggcgtca gcgccaccgt cgaagacaag gacatgaagg cggcgctcgc
    11101 cgcgctgagc gggctcgttg cgctcggcgg cttcgtgctg cggcaatggg tgaaatacca
    11161 gcgccagtcg ctcagatatc agatcgagct caccgacaac atctactacc gcaacgtcaa
    11221 caacaacgcc ggcgtcttcg actacctgat cggagcggcc gaggagcagg aatgcaagga
    11281 ggcgtttctc gcctaccatt tcctgcgcac cgcatcggcg ccgccgacgg ctgacgaact
    11341 tgccggctgc gtcggcgaat ggctgcgtgc gaccttcggc gttgacgttg ccttcaacgt
    11401 cggcgaggcc gcggcgcggc ttgaagaact gggcctgctc acgcgccacg gcgggcggct
    11461 ctcggtcttg ccgctggatg ccgccctcgc cgggcttcac cgcgcctggg acgatttctt
    11521 tccgcgcgcg ccgcagctcg cggcgcaatg atcggacgat ggaactgccg gccgctcgcg
    11581 agcgcgccgc tcgcgacacg gcccatgccg gcccaatctc acccccgggt cgacgcccgc
    11641 cctcttgacg accggcggtc gcgctgggct tggccgctgc cgctcacggc cacgaacggc
    11701 gcgcgtgcgt ccgccggtcg cgcgccggcg cgggctcttg ccggcgctgg acagccaagc
    11761 caaaatcgcg cacagaaaac gtccccgtcc gggaggaatg aatgatcaga cctatcgctg
    11821 cccttgatcg tcgtaccgtg gtcaaggccg gcgccgcgct cggcctcgcg caaatcgccg
    11881 ctcccttcgt catctcggcg cgcggcgaga cgcccatcag gatcggcgtc gacaatccgc
    11941 tgaccggcac gtatgcggcg ccgggcaaga acgaaaatac cggcatgctg ctcgccgtcg
    12001 atcagctcaa cgccaagaac ggcatcctcg gccgcaagat cgagctgcag atcgaggact
    12061 cgaccagcgg cgacgccggc gcggcggtgc agaaggcgcg caaattgatc gagcgcgaca
    12121 atgtcgactt cctggtcggc aacgtgaatt cggcactggc ccaggcgatg gcccaggtgt
    12181 cgaacgaaaa gggcgtcctg cacatcgtgc ccggcggcca caccgacggc atcaccgggg
    12241 tcaactgcaa gtggaacgtg ttccgcgtct gcaacacgac acgcatggaa gcgaactcga
    12301 tctgccccct gctgttcagc acctacggca agaaatggca cttcatcacg ccggattatg
    12361 cgttcggcca caccctcttt gagggctgcg aagcgaacct gaagaagctc ggcggcacgg
    12421 tgaccggcaa cgagcttacc ccgctcggca tcaccgactt ctccgcctac ctgatcaagg
    12481 cgcgggcggc gaacccggac gtgctgctcg tgctggtgca gggcaacgac atggtgaact
    12541 gcctcaagca gatctcgcag ttcggtatcg acaagcagat ccatgtggcc ggcacccagc
    12601 aggagctgga accggtcgag gcgatgccgc ccgaggcgcg ggtcggcatc tggatgttcg
    12661 agtggtactg gaagcagccg ggaaatacgc cgggcctcga ccagttcatc gccgacgtgc
    12721 gcaagcgcag cgacggcaag gtgccgaccg cgcgcacctg gttcggctac gtcaccatcc
    12781 acgcctacgc gctcgcctgc gagaaggcga agacgatcga agccaaggcg gtggccaagg
    12841 cgctcgccga cctggaaatg ccgccggaga tcaagatgca gccgaacaag gtgtatttcc
    12901 gcggcggcga tcatcagctc atgctgtcgg cctttatcgg cgaactgatg cacaagggcg
    12961 acggcgatcc ggagaacctg ttcaaggtca accacattgt cgccggcgac agcgtcgccc
    13021 cacccgtatc ggagaccggc tgcaccatgc agatgccggc ctgatcccgt cccctcgcgc
    13081 ccctcacttc gctcgccgtc gcggtcgcaa gtgcggggct ttctcatgac cgctcggcga
    13141 tgctccagct caccttcttc aacgtcacca acggcctgat catcggcgcg ttctatgcgc
    13201 tcatggcgat cggcctgtcg ctcatcctca acctgtcggg cgtcatcaac ttcgcgcacg
    13261 gcgggttcct ggtcatcggc ggctatctcg cctacacgct gcggccctat atcggcttct
    13321 ggggcgcgct gctcgttgcg ccgttcctta cggcgctcat cggacttgcc gtcgagcgcc
    13381 tgctgatccg ccgcatgtac gggcgcgatc cgctctacag cctgctgctc accttcggcc
    13441 tcgccttcat catcgaggac gcgacgcgcc agatgtgggg cgccaacggg ctgccgttct
    13501 cggtccccga ggcgctgacc tcgccgctga gctccgagtt cttcttcatc accggctatc
    13561 gcatgttcat ggtggcgatg gtcgcgatcg tggtcgccat cctgttcgtg ctgctgcgct
    13621 atacccggat cggcgtgcgc atccgcgccg gcacgctcga cctcgagacc gtctcggcgc
    13681 tcggcgtcaa tgtgcgggcg ctgcgctcgc tcaatttcgc cgtcggcatc tttctcgccg
    13741 ggctggccgg ggtgctcgct gccggccaga tcgggcttga accgaccatg ggcgacggcc
    13801 tgctgatgcc gagcttcatc gccatcatcg tcggcggtgt cggttcgctc accggcacgc
    13861 tgctcggcgg attgctgatc ggcgtcgctt ccggcctcac cgcggtggtt tttccctcgg
    13921 cgagcgaggc ggtcatcttc gtgatgatgg cgctcgtgct tttggtgcgc ccgcgcggcc
    13981 tgctcggcga agaaggcatg atgacgtgac gccggatcta cagaaacggg cggcgccctg
    14041 gttgcacgtc gccgcgctcg cggccatctg ggcggcgctc atcgcggcgc cgttctggat
    14101 gccgctgttc ggcggctaca ccgcgctcgg cagccgcgtg ctggtgctcg gcctcgccgc
    14161 gatgtcgctc aatttcctgc tcggcttcac cggcgtgctg tcgttcggtc acgccgcctg
    14221 gttcgggctc ggcgcctacg gcgccggctt cgtcctcaaa tgggcggtgc tgagctcgcc
    14281 ggttgcggtc atcgccggca cgctcttcgg cggcatcgtc ggcgcgctgc ttggcatgct
    14341 gctggtgcgc cgccgcggcg tctatttcgc catggtgacg atcgccttcg gccaggtgtt
    14401 ttattacatc gcgttccagt ggagctcggt gaccggcggc gacgacggct tgcgcggctt
    14461 cgagcgccag ccgctggatt tcggcgcgtt ccgcgtcgac ctgctgcacg acgaccgcgc
    14521 tttctactac ttcgcgctcg tctgtttcgc gatcgccgtc acgctgatgg cattcatcct
    14581 gcgctcgccg ttcggccgca ccatgatcgc cattcgcgag aacgagcgcc gcgcccgctt
    14641 tctcggcatt ccgatcgagt ttcacatctg ggccgccttc tcgctgtcgt gcttcttcat
    14701 ggcctttgcc ggcgcgctct acgcgctgct caacaatttc gccgatccgc gcgtgttcca
    14761 ctacagcctg tcgggtgatt tcgtcatcat ggcggtgatg ggcggcatgc ggacgttctg
    14821 ggggccgctg ctcggcgcca tcgtgttcgt cgttctccag gattacattt cgagcgtcac
    14881 cgtcaactgg atgtcgttca tcggcatgct gatcgtgttg atcgtgttgt tcttcccgcg
    14941 cggcattctc gggctggtgg agcggcggac ggcatgagca cgctcgaggt caagagcttg
    15001 accaagcgct tcggcagcct cgtcgccgtg cgcgacgtat cgatgaccgt tgccaagggc
    15061 gagttgcgcg cggtgatcgg accgaacggc gccggcaaga ccaccttctt caacctggtc
    15121 agcggctttt tcgcgccgac gtcgggctcg atcctgttcg agggccgcga cgtggccggc
    15181 ttttccgccc acgagcgggt cggaatgggc atggcgcgca ccttccagat cacggagatc
    15241 tttcccgagc tcaccgtgtt cgagaacgtc cgcatcgccg ccgaggtcgc tgccggctac
    15301 cgtctgcgcc cgtggctcag ccgcgccgac acggcggaac tgcgccggcg cgtcgaggag
    15361 acgctggcgc tggccgggct taccggcaaa gccaacaggc ttgtcggcga attggcgcac
    15421 ggtgaccagc gcgccgccga gatcgcgatg gcgctcgcgc tcaagccgcg cctccttctg
    15481 ctcgatgagc cgaccgccgg catgggcgac caggagacct acgagatcac ccagctcgtc
    15541 cgccggctgc acaaggacgg caacctgacc atcgtgctga tcgagcacga catgcgcgtc
    15601 gtcttccatc tcgccgaccg catcacggtg ctcgatcaag ggaccttcct tgccgagggt
    15661 acgccgcagg agatcgccac caacgatgcg gtgcagaccg cctatctggg caaggccgca
    15721 tgagcgcagc actcaaggtg gaagggctca acacttacta cggcaagagc cacatcctgc
    15781 acggcgtcag cctcgaagcc gccgaaggca aggtcacggc gctgctcggc cgcaacggcg
    15841 ccggcaagac cacgacgctg cgcagcctga tggggctcac cccgccgcgc gagggccgcg
    15901 tctcggtgtt cggccgcgag accacgcgct ggccgccgtt tcgcatcgcc gcgctcggcg
    15961 tcggctatgt ccccgaaggc cgcaagatct ttcccaacct caccgtcaac gaaaatctca
    16021 tggtgccgct ggagcgtccc ggcccgtgga cgccggagag catctaccgg ctgtttccgc
    16081 ggcttgccga gcgccgctcc agccgcggcc ggcaactgtc cggcggcgag caggagatgc
    16141 tgtcgatcgc ccgcgcgctg ctgatcaatc cgaagctcct gattctcgac gagccatcgc
    16201 aggggctggc gccgctcatc acgcgcgaag tcttccgcat cgtggcgcag atgcgcaccg
    16261 agggaatctc ggtgctgctg gtcgagcaga acgtgcgtat gagcctcgaa atctcagacc
    16321 acgcctacgt gctcgacgac ggtcatgtcg tctattccgg cccggcgcgc gagcttgccg
    16381 ccgatcaggc ccgcgtcgaa tcgctcgccg gcgccagcgc cgaggaatgg acgccgcact
    16441 agcgtgggat tgcgacggcc cctgcacgtt cttgtgcgac gcagaatcca agaccgtgga
    16501 tgcccgcgac aagcgcgaca aggcgggcat gacggcttca atcaaacact ttgggcgttt
    16561 tgccggcgat tgggccgccg cattgccccg gccgctcgat gccgcgtgat ggtcgccgct
    16621 gtcaggtcgc gtcgttgggg ttgaggccgt acttcgcgca catcttgctg acgagggcgg
    16681 catccttgcc accggcgatg aggccgacca ccgccgagga aaccctgccg ccgacgactc
    16741 tcgcttccac gatgtaggct tggtggccgc tgtaggcggg gaaggggctc ttggcgtcca
    16801 cagtgccgca atagttgacc ttgtcggcgg cggccaccgg aaacttggcc caccgatact
    16861 tggcgctccc cgcgtccctg atcgaaagcg cgatggcgtc gacgatcacg cgtttttcct
    16921 gcggcgtgag atcgcgctgc gggccgccgg cgactgccgg aggcgcattc tcggcggcgg
    16981 ccgccacttc cggcgacggc ggtgaactcg tgcatcccgc aaccgcgacg cacgctgcca
    17041 atacggcaac cacacagcgt tccattactg ccaagctgcg cccgtcattg cgctgagggc
    17101 acggcggccg cgaccgagtc cgccgaactg ttggtgacgt gaacacgacc gatggtcacc
    17161 gtcggtccgc cgctcggcgg cggcggcggc gccgtgctgc gatccgcatg aacggtgcgg
    17221 atgccggtgg tgatcatcga acggccgtcg cgcgtcgcgc tgcccatctc cttgacattg
    17281 tcttcgatga ggttgtcggc cattcccggg tgcgtgttga tctggcgcat attgttgatg
    17341 aacacccgcg ggtagatgag cgacgatttc ggtacccgca aacccatgaa ctgcgcgatg
    17401 tcgccaacga aggcgttgca attgtagagc tccgcactcc acactttctt gctggcctgg
    17461 agctgccgga caaagaccat gacgcgatcg tattgcgcct tgctcatgta cacgcgatag
    17521 cgggcggaga tgtatttgtc ctcgagatcg ccatcggtcc agccggtctc ggcgggcacc
    17581 ggcacgtagt ggccaatcac ccaggcggtc gagtcgtcgc cgaccggcga aagaccggcg
    17641 acactggctt tggtgagcgg ctcgccgaca cggccgtgga caatgaaggt gtggccatag
    17701 tcccaggcgt agcgcgcgcg aaactcgacg aagtactggc cgccgccgct ggccgcggcg
    17761 gcaggttttg caccggcggc gtcggcatcc tgcgctagtg ctgggaagat tccggccccg
    17821 gccaaaatag cgagcgaaat caggcccgtg agccaggcgg gactgcgccc aaacctcagc
    17881 ttttcttgca tcgtgccctc cgcatccccg gcgaaagccc gctaggcgac gattcgcgcg
    17941 tcttccgcct cgtttcaacg tcccggatcg taccaaacta ttcagtcttg ctcggtggca
    18001 attgttcggc agaccatgtg gatttccggc aatgcggcat atttgcaacg gttgccgcgt
    18061 tctgaacggt gaaagcatac cctatcatgc tgcagatatt gagtttttct ctcggccgtg
    18121 aagccggaaa aggttcgttt ccatcgccgt ggggtaccgc tttcgccgaa cgcggccggc
    18181 aattgcggtc aatcgtcggc gaaacggtgc aaacaaacgg cgggtgtgtc ttttcagcac
    18241 tagagggtcg gtccggccgc atgtatggtt aagcggtcat gacaaagggg gagtttcttt
    18301 catgaaaaag ctcgctctag caacggccgc ggtgcttgct ctcctgagca tcgctggctg
    18361 cgctaatgta ggcaaaggca aggccccgcc gcccgtagtg acgaaggggt aaagccgtac
    18421 aa
//
LOCUS       DATMQB010000427         8156 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4224136, whole genome shotgun sequence.
ACCESSION   DATMQB010000427 DATMQB010000000
VERSION     DATMQB010000427.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8156)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8156)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8156
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4224136"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..133)
                     /locus_tag="VNY79_12210"
     CDS             complement(<1..133)
                     /locus_tag="VNY79_12210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HWX73258.1"
                     /translation="MTPLSVLDLSPVTTATPGSAALRNSLDLARLADRLGYARYWLAE
                     "
     gene            complement(212..1300)
                     /locus_tag="VNY79_12215"
     CDS             complement(212..1300)
                     /locus_tag="VNY79_12215"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73259.1"
                     /translation="MFPNFRLMIAAVAASVVALSCGFGVFAALRVNHEPLARLPAATA
                     PLQLVPDKVAGPALLSASPSPVGEPEIAAAAPDVPAGESAPHESDQTPSAASAAEPEA
                     VASIAEAKTEAAAQPAEPPATRSAALAADDHPSSAAEPEPVPVAAGSATPAASGEAAV
                     AAAGDKANIEKPADATGEPVPAATPNVAALERPAADTDQTAPADQTQPVERTVSTEQA
                     APVEQTARLQTAEAEQTARAEQSAPRGQPVPGEQIGPTEQTTSPMKIARPNLEDDAAD
                     AAPTPTEKIARKKHAKTRVAAKTHRKHRESQRAPTMPDSMFLQPRFVSAPRAFQSPTG
                     MWRVKVTSRRTSSPGSAVGGPFVRTPSR"
     gene            complement(1548..2612)
                     /locus_tag="VNY79_12220"
     CDS             complement(1548..2612)
                     /locus_tag="VNY79_12220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HWX73260.1"
                     /translation="MRLSNSFVVVALSLAGSLGMAAAQDHPPPMVEYNPAPPAVYPSD
                     EPPSYSRPPLPPLETGAELTDPAGSHYGHAPSAHRDANGVPPQPYDPRYDEQAREMGP
                     PPYPPSGQQYAVPAGRPGQQPMPGGDAVPRPPVDVGGSAPPDVTGAVHNPGDGAAAAG
                     DRATVIAALPPEDQPEQGPAKQLPPQFRRQLVDYPTSEPAGTIIIDTPHTFLYLVRGH
                     GKALRYGIGVGREGFTWAGSERVTRMSEWPDWHPPKEMIERQPYLPRFMAGGDGNPLG
                     ARALYLGNTIYRIHGTNQPSTIGSFVSSGCIRLTNPDISDLYGRVNVGTRVVVLSGPP
                     AASGPAPAPASASAQARVTR"
     gene            2754..3200
                     /locus_tag="VNY79_12225"
     CDS             2754..3200
                     /locus_tag="VNY79_12225"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73261.1"
                     /translation="MNGTVPSDRLIGFGSPRRTDYHGNRLHPSTLGDSDVYRIACGVA
                     FLLIACSSVRAQDPAIDDLKGKIFDARMAQQTLGDALKYCPELNGKSFYFRVRNRILD
                     LEEYFHSLENLVKAQTFNPDKRRRWSLQDAKERWDRRRKTRRNASW"
     gene            3376..4350
                     /locus_tag="VNY79_12230"
     CDS             3376..4350
                     /locus_tag="VNY79_12230"
                     /EC_number="3.4.21.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004252 - serine-type endopeptidase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="S1C family serine protease"
                     /protein_id="HWX73262.1"
                     /translation="MASVSDWKVPASAQPKSADYAYDLDLALSAMVALHATVPADAFT
                     AETLGTERAGNGVFIRNGVVLTIGYLITEAETIWLTLSDGRSVPGHVLGYDQETGFGL
                     VQALAKLDVPALKLGESAAASLGERVVLGGAGGRHRSVAGRIVAKQEFAGYWEYVLDE
                     AIFTAPAHPNWGGTALIGPAGDLLGIGSLQLQHAVEKGHAQNINMVVPIDLLKPILDD
                     LTKFGRRNTPARPWLGLFATEVENRLVIVGLADRGPAKRADLRTGDIVLAVAGSEVRD
                     LAGFFRGVWAQGKAGVEVPLTIFRDGHTMELRVKSGERDRFLKGPSLH"
     gene            complement(4412..5290)
                     /locus_tag="VNY79_12235"
     CDS             complement(4412..5290)
                     /locus_tag="VNY79_12235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent epimerase/dehydratase family
                     protein"
                     /protein_id="HWX73263.1"
                     /translation="MSTLVCFGLGYSAEHFVGTLGDGFERIVGTVRGAERAAVLNAHL
                     AGRLKALVFNGTSANPDVINAIGHADCALVSVPPNENGDPVLATFGDALAHARHLRTI
                     VYLSTVGVYGDHAGEWVDETTPPKPGSARGRARLDAERAWQRLGARCGAAVAILRLAG
                     IYGPGQNALVQIKQGNARRVVKPGQVFNRIHVADIAQAIDAAFARKVGGIFNIADDEP
                     SAPGDPLAFAAQLLGRDPPPEVPFEEAAPLLSPMALSFWQECRRVRNDGLKRELGVSL
                     LYPTYREGLRALFAAR"
     gene            complement(5298..6422)
                     /gene="queG"
                     /locus_tag="VNY79_12240"
     CDS             complement(5298..6422)
                     /gene="queG"
                     /locus_tag="VNY79_12240"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006023272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0052693 - epoxyqueuosine reductase
                     activity [Evidence IEA];
                     GO_process: GO:0008616 - queuosine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HWX73264.1"
                     /translation="MTPAALKSALAAAARAHGFEIVGIARPDSIPRAGERLRAFLAAG
                     EHGDMEWMAKNADRRGDPRTLWSEVRAVVMLGFNYGPADDPLAILKARTRGAISVYAQ
                     GDDYHELIKPRLKGLGRWLVENAGGDIKVFVDTAPVMEKPLAEAAGLGWQGKHTNLVS
                     REHGSWLFLGAIFTTLELPPDRPDDDHCGTCRACLDICPTGAFPAPYRLDARRCISYL
                     TIEHKGPIPRELRPLMGNRIYGCDDCLAVCPWNKFARAGREAKLAARAALRAPPLAEL
                     AGLDDAGFRALFTKSAVKRIGRARFLRNVLIAIGNSGDPTLASAAERLLADASPLVRG
                     AAVWALGRLDRPRLALCAEKRCGAESDPHVVAEWAAVLDG"
     gene            complement(6419..7108)
                     /locus_tag="VNY79_12245"
     CDS             complement(6419..7108)
                     /locus_tag="VNY79_12245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018645042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006749 - glutathione metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HWX73265.1"
                     /translation="MLTLFHHPFCPHSRFVRLAVEELGLASRLVEERVWDRREEFLIL
                     NPAGTTPVLVEEGMPPVPGAAIIAEYLDETRGAKLAQPRLLPRDAGPRVEVRRLMSWF
                     NDKFFEEVSGPLVMERVYKRFIPAGGGGPPDTETMRAARSNIRYHLSYIGWLIRKRDW
                     LAGDSLTYADFAAAAHLSAVDYLGDVPWDEDETAKAWYARIKSRPSFRTLLGDTLAGV
                     PASPSYANLDF"
     gene            7381..>8156
                     /locus_tag="VNY79_12250"
     CDS             7381..>8156
                     /locus_tag="VNY79_12250"
                     /EC_number="3.6.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0050380 - undecaprenyl-diphosphatase
                     activity [Evidence IEA];
                     GO_process: GO:0016311 - dephosphorylation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl-diphosphate phosphatase"
                     /protein_id="HWX73266.1"
                     /translation="MTFDIIRAAILGVVEGLTEFVPVSSTGHLLLLEQFFGFSDEDFG
                     KSFTVLIQFGAILALLSIYSVRLWQLAVGIFNDAQARRFVIGVLIAFLPAAVIGALAY
                     KFIKEVLFNPWVVCVSLIIGGLILLWIDRLDLKPRYHDATRFTLPMYLVIGLAQCVSM
                     IPGVSRSGATIVSAMLLGADRRAAAEFSFWLAMPTMAGAFAYDLYKNHAQMSSGNAAL
                     VAVGFIVSFISAWFVVKTFLGYVTRHGFTLFVWWRVAVGTA"
BASE COUNT         1316 a         2674 c         2816 g         1350 t
ORIGIN      
        1 gttccgcgag ccagtagcgc gcatagccga ggcggtcggc aagccgcgcc agatcgagcg
       61 agttgcgtaa tgccgccgat cccggcgttg ccgtggtgac gggcgacagg tcgaggacgg
      121 aaagcggcgt cacgcgtgct caggaggaaa atgccggcgg tgcaggagcg aacgtgggcg
      181 caagcacgcc ctgcgtcaat ccagcttcgg cttagcggct cggcgtcctg acaaacggcc
      241 cacccacggc agaacctggg ctcgacgttc ttcgcgaggt gaccttgacg cgccacattc
      301 cggtcggcga ctggaatgcc cgcggcgcgc tcacaaagcg aggctgcagg aacatcgaat
      361 caggcattgt tggtgcgcgc tgcgactctc gatgcttgcg gtgcgtcttg gcggcaacgc
      421 gcgtcttcgc gtgcttcttg cgcgcgattt tctcggtagg agtgggggcg gcatcggcgg
      481 cgtcatcttc caaattcggc cgcgcgatct tcatgggaga agtcgtctgc tcagtgggac
      541 cgatctgctc gccgggaacg ggttgcccgc gcggggcgct ctgctcggcc cgggccgttt
      601 gctcggcctc ggcagtttgg aggcgtgcgg tctgctcgac cggtgcggcc tgctcggtcg
      661 acacggttcg ctcgactggc tgggtttggt ccgccggcgc ggtctgatcc gtatccgctg
      721 ccggccgctc gagggcggcg acgttcggcg tcgcagccgg cacgggttct ccggtcgcgt
      781 cggccggctt ctctatattt gctttgtcgc ccgctgcggc aaccgccgct tctcccgagg
      841 ccgcgggtgt ggcgctgcct gcagcgacag gcaccggttc cggctcggca gcgctggatg
      901 gatgatcgtc ggcagcaagc gcggccgaac gcgtcgccgg cggctctgcc ggctgcgccg
      961 cggcctccgt cttcgcttcc gcaatggatg cgacggcttc cggctcggcg gccgaagcgg
     1021 cggacggagt ttgatcgctc tcgtggggcg cgctctcgcc cgccggaacg tctggcgcgg
     1081 cggcggcgat ttccggctcg ccgaccgggg aggggctggc ggacagcaga gcgggacccg
     1141 ccaccttatc ggggacgagt tgcagcggtg cggtcgccgc cggcaggcgc gcgagcggct
     1201 cgtggttgac gcgcaacgcc gcgaacacgc cgaagccaca gctcaatgcg accacggaag
     1261 ccgccaccgc ggcgatcatc agacgaaagt tggggaacat cgcacctcgc aatgaagggc
     1321 ccgcgcgcga ctcgcaaaag cacgcgtcac aacgggcgag agatcatcgc gagggagagg
     1381 ggttcagcgt cgacgacagc ccccttgatc gacgcatcgc tgaaaggcgg ccggttccgg
     1441 tccgccgaat caggcaggcg cgacattagc ttgagtcgcg gaaaacccaa cagaaaaaaa
     1501 ccgaagccca accgctgccg ctttgggtgg tgagcacgcc gagcgtgcta tcgcgtcacc
     1561 cgcgcttgcg ccgacgccga cgccggcgcc ggcgccggtc ccgacgcagc tggcggtccc
     1621 gacagcacga cgacgcgcgt accgacattc actcggccgt agagatccga gatgtccggg
     1681 ttggtcaggc ggatgcagcc cgaggacacg aaagagccga tggtcgatgg ctggttggtg
     1741 ccgtggatgc gatagatcgt gttgccgaga tagagcgcgc gtgctcccag cgggttgccg
     1801 tcgccgccgg ccatgaaccg cggcagatag ggctggcgct cgatcatttc cttcggcggg
     1861 tgccagtccg gccattcgct catgcgggtg acgcgctcgc tgcccgccca ggtaaagcct
     1921 tcgcgtccga cgccgatccc gtagcgcagc gctttcccgt ggccgcgcac cagatagaga
     1981 aaggtatggg gagtatcgat gatgatggtc cccgcgggtt ccgaggtcgg atagtcgacc
     2041 aactgccggc ggaactgcgg gggcagctgt ttggcgggac cttgttcggg ctgatcctcg
     2101 ggcggcaatg ccgcaatcac cgtagcgcga tctcccgccg ctgcggcgcc gtcgcccggg
     2161 ttgtggacag ccccggtaac gtccggcggc gcagagccgc cgacatccac cggcggccgt
     2221 ggaaccgcat cgcctccggg catgggctgc tggcccgggc gaccggcggg aacggcatat
     2281 tgctggccgc tcggcggata gggaggcggt cccatctcgc gcgcctgctc gtcgtaacgc
     2341 ggatcgtagg gttgcggcgg cacgccgttt gcgtcgcgat gggccgacgg cgcgtgacca
     2401 tagtgactgc cggccgggtc ggttagctcg gcgccggtct ccaatggcgg caatggtggg
     2461 cggctgtagc tcggcggctc atcggatgga tagaccgccg gcggggccgg gttgtattca
     2521 accatcggcg gcggatgatc ctgcgctgct gccatgccaa gagagccggc aagcgacaac
     2581 gcgaccacga cgaagctgtt gctgagccgc aagttgaatc ccccaggcaa tcccgcagcc
     2641 gcccttgtgc aaagaagatt tggcgggaac aaggcagcaa cgccgcgcac gcaccaatgc
     2701 gcggcgtgcg acggcacctc gagactgctt agccgattct tcgccaatga atcgtgaacg
     2761 gaaccgtgcc cagcgacaga ttaatcggat ttggctcgcc tcgccggact gactatcatg
     2821 gcaacaggct gcatccgtcg acgcttggag actctgacgt gtaccggatt gcttgcggcg
     2881 tcgcgttcct gctgatcgcc tgctcgtccg ttcgtgcgca agacccggcc attgacgacc
     2941 tcaagggcaa gatcttcgac gcccgcatgg cgcagcagac cctcggcgat gctctgaaat
     3001 attgcccgga gctcaacggc aagagcttct acttccgggt gcgcaatcgc atcctcgatc
     3061 ttgaggaata ctttcactcg ctcgaaaacc tcgtgaaggc gcagaccttc aatcccgaca
     3121 agcggcggcg gtggagcttg caggacgcga aggaacgctg ggacaggcgc aggaagacaa
     3181 ggagaaatgc gagctggtga ggagcctccc ggaactcgag aaacggctgg aggagttgca
     3241 gaagaactcc gcggcctctg gacacaagga ttgaatcgtg tgccgcgttg ccatgcggac
     3301 cgctcttcgg caactgcatc gccaggctcc gacgggcagt gccgtaggcg cgagcgcgtc
     3361 cgaaggagcg gtgagatggc ctccgtgagc gattggaaag tgccggcctc ggcgcagccg
     3421 aagtcggcgg attatgccta cgatctcgac ctcgccttga gcgccatggt ggcgttgcac
     3481 gcgacggttc ccgccgatgc gttcacggcg gagacgctcg gcaccgagcg cgccggtaac
     3541 ggcgtgttca tccgtaacgg cgtggttctg accatcggct acctgatcac cgaagcggaa
     3601 acgatctggc tgacgctcag tgacggccgc tcggtgcccg gtcatgtgct cggctacgac
     3661 caggagaccg gcttcggact ggtgcaggca ctggccaagc tcgatgtgcc cgccctcaag
     3721 ctcggcgagt cggcggcggc ctcgctcggc gaacgtgtcg tgctcggcgg cgctggcggg
     3781 cggcatcgat cggtcgccgg gcgcatcgtc gccaagcagg aattcgccgg ctattgggaa
     3841 tacgtgctcg acgaggcgat cttcaccgcg ccggcccatc ccaattgggg cggcaccgcg
     3901 ctgatcggac ccgccggcga tctgctcggc atcggctcgc tgcagctgca gcatgccgtc
     3961 gagaagggcc acgcgcagaa catcaacatg gtcgtgccga tcgacctgtt gaagccgatt
     4021 ctcgacgacc tcacgaagtt cggccggcgc aacacgccgg cgcggccctg gctcggcctg
     4081 ttcgcgaccg aggtggagaa ccgcctcgtc atcgtcggtc tcgccgaccg cggaccggcc
     4141 aagcgcgccg atctgcgcac cggggacatc gtgcttgccg tcgccggcag cgaagtgcgc
     4201 gatctcgccg gcttcttccg cggcgtctgg gcgcaaggca aggccggggt cgaagtgccg
     4261 ctgacaatct tccgcgacgg ccacacgatg gagctgcgcg taaagtcggg cgagcgcgac
     4321 cgtttcctca aggggccgag tttgcattga cgaaaaccct ccgcgtgcgg gagcgtgctc
     4381 ggcgatcgaa gtgagcgcgg cgggtgaggc ctcatcgcgc cgcgaacagc gcgcgcaaac
     4441 cttcccggta ggtcggatag agcaggctga cgccgagctc gcgcttgagc ccgtcgttgc
     4501 gcacgcgccg gcattcctgc cagaagctca gcgccatcgg cgagagcaac ggcgcggctt
     4561 cttcgaatgg cacctccggc ggcgggtcgc ggccgagcag ttgcgcggcg aaggcgagcg
     4621 gatcgccggg cgcgctcggc tcgtcgtcgg cgatattgaa gatgccgccg accttgcggg
     4681 caaaggccgc gtcgatcgcc tgcgcaatgt cggcgacgtg gatgcggttg aagacctggc
     4741 cgggcttgac gaccctgcgc gcgtttccct gtttgatctg gaccagggca ttctgtccgg
     4801 gtccgtagat gccggcgagg cgcaggatgg cgaccgcggc gccgcaccgt gcgccgagcc
     4861 gctgccacgc gcgctcggca tcaaggcgag cgcgcccgcg cgccgagccc ggctttggcg
     4921 gcgtggtctc gtcgacccat tcgccggcat gatcgccgta gacgccgacc gtcgacagat
     4981 aaacgatcgt gcgcaggtgg cgcgcgtgcg ccagcgcatc gccaaaggtc gcaagcacgg
     5041 gatcgccgtt ctcattcggc ggaaccgaga ccagcgcgca gtcggcgtgg ccgatggcgt
     5101 tgatcacgtc cgggttcgcg gaggtgccgt tgaagacgag cgctttgagc cgtccggcaa
     5161 gatgggcgtt gagcaccgcg gctcgctccg cgccgcgcac cgtgccgacg atgcgctcaa
     5221 acccgtcgcc gagcgtgccg acgaaatgtt ccgccgaata accgaggccg aagcaaacaa
     5281 gcgtggacat cgcgtcctca tccgtccagg actgccgccc attcggcgac gacgtgcgga
     5341 tcggactcgg cgccgcagcg cttctcggcg cagagggcga gacgcgggcg gtcgagccgg
     5401 cccagcgccc agacggccgc gccgcgcacg agcggcgaag catcagcgag cagccgctcg
     5461 gcagcgctgg cgagcgtcgg gtcgcccgaa ttgccgatcg cgatcagcac attgcggaga
     5521 aaacgggcgc ggccgatgcg cttgaccgcg ctcttggtga acagcgcgcg aaaacccgcg
     5581 tcgtcgaggc cggccagttc ggcgagcggc ggcgcacgca acgcggcccg cgccgcaagc
     5641 ttcgcctcgc ggccggcgcg cgcgaatttg ttccacgggc aaaccgccag gcaatcgtcg
     5701 cagccgtaga tgcggttgcc catcaacgga cgcagttcgc gcgggatcgg gcccttgtgc
     5761 tcgatggtga gataggagat gcagcgccgc gcatcgaggc gatacggcgc cgggaaggcg
     5821 ccggtcgggc agatgtcgag gcaggcgcga caggtgccgc aatgatcgtc gtccggtcgg
     5881 tcgggcggca actcgagcgt ggtgaagatc gcgccgagga acagccacga gccgtgttcg
     5941 cgcgagacca gattcgtgtg cttgccctgc cagccgaggc cggccgcttc ggcgagcggc
     6001 ttctccatca ccggcgcggt gtcgacgaat accttgatgt cgccgccggc gttttcgacg
     6061 agccagcgcc cgaggccttt gagccgcggc ttgatcagct cgtggtagtc gtcgccctgg
     6121 gcatagaccg atatggcgcc gcgcgtgcgc gctttcagga tcgccagcgg atcatcggcc
     6181 ggaccgtagt tgaagccgag catcaccacc gcgcgcacct cggaccacag cgtgcgcgga
     6241 tcgccacgcc ggtcggcgtt cttcgccatc cattccatgt cgccatgttc gccggcggcg
     6301 aggaaggcgc gcagccgctc gcccgcgcgc gggatcgaat cgggccgcgc gatcccgaca
     6361 atttcgaaac catgggcgcg cgctgcggcg gcgagcgcgc tcttgagcgc ggccggagtc
     6421 agaaatcgag attggcgtag ctcggcgacg ccggcacgcc ggcgagtgtg tctccgagca
     6481 gggtgcgaaa cgacggccgc gatttgatcc gcgcgtacca ggcctttgct gtctcgtctt
     6541 cgtcccacgg cacatcgccc agataatcga ctgcagacag gtgcgccgcc gcggcaaagt
     6601 ccgcataggt caggctgtcc ccggcgagcc agtcgcgctt gcgaatgagc cagccgatgt
     6661 agctcagatg atatctaatg ttgctgcgcg ccgcccgcat cgtctcggta tcgggcggtc
     6721 cgccgccgcc ggccgggatg aatcgcttgt agacgcgctc catgaccagc gggccgctga
     6781 cctcctcgaa gaatttgtcg ttgaaccagc tcatcagccg ccgcacctcg acgcgcgggc
     6841 cggcgtcgcg cggcagcagc cgcggctgcg cgagctttgc tccgcgcgtc tcgtcgaggt
     6901 attcggcgat gatcgccgcc ccgggaactg gcggcatgcc ctcttccacc agcaccggcg
     6961 tcgttcccgc cggattgagg atgagaaact cctcgcgccg gtcccagacc cgctcctcga
     7021 cgagccggga cgccaagccg agctcttcaa cggcgaggcg cacgaagcgg gagtgcggac
     7081 aaaacggatg atggaacagc gtcagcatgc gagcgccgtc gcgttggaac aaagtcattg
     7141 aggcgagtcg cgggagcagg ggaaccgcgc cgcgactctc aaatgatccc tcttataggc
     7201 gaagcgaagg cgcaggcaac cggtgcgggg gggccgctgt gcacggcgtc tttgtcgttg
     7261 ccagaatgcc ggccttgcgt cacaaggctg ccactggcct tgctcacaag gctgacagat
     7321 gatccggcaa agtgccctgt cgaccgcgcg cacgccgcgc gttcccgccg cggagctcac
     7381 atgacgtttg acatcatcag ggcggccatc ctcggcgtgg tcgagggcct gaccgaattc
     7441 gtacccgtct cctcgaccgg gcacctcctg ctgctggagc agttcttcgg cttcagcgat
     7501 gaggacttcg gcaagagctt caccgtcctg atccagttcg gcgccatcct ggcgctcctg
     7561 tcgatctatt cggtgcggct gtggcagctc gccgtcggca ttttcaacga tgcgcaggcg
     7621 cggcgtttcg tcatcggcgt gctgatcgcg ttcctaccgg cggcggtcat cggcgccctc
     7681 gcctacaaat tcatcaagga ggtgctgttc aatccctggg tcgtgtgcgt gtcgctgatc
     7741 atcggcggcc ttattcttct ttggatcgac cggctcgatc tcaagccgcg ctaccacgac
     7801 gcgacgcgct tcacgttgcc gatgtacctg gtgatcgggc tggcgcaatg cgtgtccatg
     7861 atccccggcg tctcccgttc cggggcgacc atcgtgtcag cgatgctgct cggcgccgat
     7921 cggcgcgcgg cggcggagtt ctcgttctgg ctcgccatgc ccaccatggc cggcgcattc
     7981 gcctacgacc tttacaagaa ccacgcgcag atgagcagcg gcaatgcggc gctcgtcgcc
     8041 gtcggcttca tcgtctcctt catctccgcc tggttcgtgg tgaagacctt cctcggctac
     8101 gtcacgcgcc acggcttcac gctgttcgtg tggtggcgtg tcgcggtggg caccgc
//
LOCUS       DATMQB010000428         2496 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1468090, whole genome shotgun sequence.
ACCESSION   DATMQB010000428 DATMQB010000000
VERSION     DATMQB010000428.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2496)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2496)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2496
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1468090"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            326..778
                     /locus_tag="VNY79_12255"
     CDS             326..778
                     /locus_tag="VNY79_12255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018184270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HWX73267.1"
                     /translation="MPRVVGIDHLVLTVGDFARSKAFYDKLMGFLGFKLKHEYAGMAG
                     WSNGKTLLWIAAADAQGRKQKYRKGDIGFHHYAFELASRGDVDKLGAFLEENGMTVLD
                     PPGEYYGRNYYAVYFGDPDGMKLEGMIWAPPAAKRKPAARGKKKSGKS"
     gene            complement(870..>2496)
                     /locus_tag="VNY79_12260"
     CDS             complement(870..>2496)
                     /locus_tag="VNY79_12260"
                     /EC_number="2.7.7.65"
                     /inference="COORDINATES: protein motif:HMM:NF014763.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HWX73268.1"
                     /translation="RRHQPILSIRARLIVLALLAIVPLMLERVHSLERARAERAELVR
                     SQLVDLARSGEAAQREIIDSARTLLRVFARTHERMPLDAPDCNRSLAELTANVPWIGG
                     LGVAGTDGRLTCATDPRAIGLNISDRPYFQEALRSHEFVLSDYLINRVQHAPGLMAAF
                     PITHEDGSLRGVVLASIRVEWIAEFARTVARRPGTSVLVIDGSGTLIGGSPDAGEFVG
                     KNFANHGLTRETLRNDEGATTVAGFDGVRRIFGHVRVPGTRARLAVGLDESVVHSGID
                     REISIAYVQLALFGMLVLLIAWFGGERLIVRPIRALVLTAARFGRGDLHVRAGDEPWL
                     AEFQPLAAALDDMAHKLAGREEELRVANQHLEALASLDGLTGLANRRGFDRALERAWQ
                     HADERREPLALMMIDIDHFKLFNDRYGHVSGDTCLRAVGETLSLVLVDEAVLVARYGG
                     EEFALLLPGLDISRATALADEARGAIEDLLITHADSPCGHVTVSVGVESIVPAPGQAA
                     ADLVEAADRALYAAKRRGRNTVIAHVPMVMSAA"
BASE COUNT          431 a          803 c          861 g          401 t
ORIGIN      
        1 gcttgctctc ctgagcatcg ctggctgcgc taatgtaggc aaaggcaagg ccccgccgcc
       61 cgtagtgacg aaggggtaaa gccgtacaac tcgatgtatg ggggaagggc cggcctcgtg
      121 ccggcccctt tctttttggg ttcccctgct cgctcgaatg tagcgccatc gggtcccggc
      181 ccaaagagtt aatttttcgc tagcgccgcc ttttacctcg ggcggcgtgc ggctgtgatc
      241 gccgcgaacg aacgtccgaa ttccggattg atctatcaag cttgcggcac gccaatacgg
      301 gactacctga cgtaacggag gtcccatgcc tcgcgtggtc ggcatcgacc atctcgtgct
      361 caccgtcggc gactttgccc ggtcgaaggc gttctacgac aagctcatgg gctttctcgg
      421 cttcaagctc aaacacgaat acgcgggcat ggcgggctgg agcaacggca agacgctgtt
      481 gtggatagcg gccgccgacg cgcagggcag aaagcagaaa taccgcaagg gcgacatcgg
      541 ctttcatcac tacgcgttcg agctcgccag ccgcggcgac gtcgacaagc tcggtgcatt
      601 ccttgaagag aacgggatga cggtgcttga tccgccgggc gagtattacg gccgcaacta
      661 ctacgccgtc tactttggcg atccggacgg catgaagctc gaaggcatga tctgggcgcc
      721 gcccgcggcg aagcgcaagc cggcggcgag ggggaaaaag aagtcgggga aatcctgata
      781 gcgcagcccc ggatgagccg ggcgcgacgc ttctcgcctg ggctgcgctc aacgcagccg
      841 cggcgtcggg tgcgtcggcg ccttcatcat catgccgcgc tcatcaccat cggaacgtgc
      901 gcgatcaccg tgttgcggcc gcgccgcttc gccgcgtaga gcgcgcgatc cgccgcctcg
      961 accagatcgg cggccgcttg gccgggcgcc ggcacgatcg attcgacgcc gacgctgacg
     1021 gtgacgtgcc cgcatggcga atcggcatgg gtgatgagca ggtcctcgat ggcgccgcgc
     1081 gcctcgtcgg cgagtgcggt tgcccggctg atatcgaggc ctggcagcag cagcgcgaac
     1141 tcctcgccgc catagcgcgc gaccagcacg gcttcgtcga cgagcaccag cgacagggtc
     1201 tcgccgaccg cgcgcaggca ggtgtcgcca ctgacatggc cgtagcggtc gttgaacagc
     1261 ttgaaatgat cgatatcgat catcatcagc gccagcggtt cgcggcgctc gtcggcgtgt
     1321 tgccacgcgc gctcgagcgc gcggtcgaag ccgcgccggt tggcgaggcc ggtgaggccg
     1381 tcgaggctcg ccagcgcttc gaggtgttga ttggcgacgc gcaattcctc ctcgcgtccg
     1441 gcgagcttgt gcgccatgtc gtcgagggcg gcggcgagtg gctggaattc ggcaagccag
     1501 ggttcgtcgc cggcgcgtac gtgaaggtcg ccccggccga agcgcgccgc cgtaagtacc
     1561 agcgcgcgga tcgggcgcac gatgagccgc tcgccgccga accaggcgat gagcagaaca
     1621 agcatcccga acagggcaag ctgcacgtag gcgatgctga tctcgcggtc gatgccgctg
     1681 tgcacgacgc tttcgtcgag gcccaccgcc agccgagcac gcgtcccggg gacgcggacg
     1741 tggccgaaga tgcgccgcac gccgtcgaag ccggcaacgg tggtcgcgcc ctcgtcattc
     1801 ctcagcgtct cccgcgtcaa accgtggttg gcgaagttct tgccgacgaa ctctcccgcg
     1861 tccggggagc cgccgatgag cgtgccgctc ccgtcgatca cgagtaccga agtgcccggg
     1921 cggcgcgcca cggtccgcgc gaactcggcg atccattcca ccctgatcga cgccaggacg
     1981 acgccgcgga gcgagccgtc ctcatgggtg atggggaacg cggccatgag tccgggcgcg
     2041 tgctgcacgc ggttgatcag gtagtcgctg agcacgaact cgtgcgaccg aagggcctcc
     2101 tgaaaatagg gccggtcgga tatgttgagc ccgatcgcgc gcggatcggt cgcgcaggtg
     2161 aggcggccgt cggttccggc aacgccaagc ccgccaatcc agggaacgtt tgcggtcaac
     2221 tcggcaagcg aacggttgca gtccggcgca tcgagcggca tcctctcatg agtacgagcg
     2281 aagacgcgga ggagggtgcg cgcggaatcg atgatctcac gctgcgccgc ttcgccgctg
     2341 cgcgccagat cgaccaactg cgagcgcacc agttcggccc gctcggcgcg ggcgcgctcg
     2401 aggctgtgca cacgttcgag catgagcgga acgatggcga ggagggcgag gacgatcaat
     2461 cgggcgcgga tgctgaggat cggctgatga cgccgc
//
LOCUS       DATMQB010000429         2432 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2690691, whole genome shotgun sequence.
ACCESSION   DATMQB010000429 DATMQB010000000
VERSION     DATMQB010000429.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2432)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2432)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2432
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2690691"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..586
                     /locus_tag="VNY79_12265"
     CDS             <1..586
                     /locus_tag="VNY79_12265"
                     /EC_number="2.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002713945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="gamma-glutamyltransferase"
                     /protein_id="HWX73269.1"
                     /translation="AEGENTTHFSVVDSFGNAVANTYTLNFSYGVGLVAAGTGVLLNN
                     ELDDFAAKPDAPNAYGLLGYQANAPGPGKRPLSSMTPTIVLKDGKPFLVTGSPGGSLI
                     INAVLQVAVDVIDRGMDIAAAVSAPRVHNQWMPDLIFAEPGVAADLIAALEARGDKVM
                     VRRLPTSANSILVAPTGLVGAADPRSRGALAAGY"
     gene            complement(603..1028)
                     /locus_tag="VNY79_12270"
     CDS             complement(603..1028)
                     /locus_tag="VNY79_12270"
                     /inference="COORDINATES: protein motif:HMM:NF015423.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TRIC cation channel family protein"
                     /protein_id="HWX73270.1"
                     /translation="MRIVIPRPRRRLAGLHSAGRQRSLLSWLVFASLSLVGVVVALDT
                     SAQPLWLWGPIAAVITASFGGLMRDLYRHDRVTANLGGELYPEIAAVCGLALAVFLGW
                     EGERLQPDEIKIGVIVTISTAFLIRMVAVARGTKGWRFV"
     gene            complement(1167..1949)
                     /locus_tag="VNY79_12275"
     CDS             complement(1167..1949)
                     /locus_tag="VNY79_12275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008967775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HWX73271.1"
                     /translation="MRIIVDGNETYVGTGGREFDPGLPAVVFLHGAGLDHSVWALLAR
                     AFAHHGCGVLAPDLPGHGRSAGAPLASIAALADWTAALVDAAGARTARLVGHSMGSLI
                     ALETAARHPDKVNGLGLIATAAAMTVSADLLNAAKANDHAAIDMVAIWGNGYHATIGG
                     SLAPGLWMLGGAERLLERARPGVLFTDLAACNEYRDALAAAAKVTVPAAVILGSRDVM
                     TPAKSGKAVAAAMPAGRVTVLDGAGHMLMSERPEEVLAALRA"
     gene            complement(1953..>2432)
                     /locus_tag="VNY79_12280"
     CDS             complement(1953..>2432)
                     /locus_tag="VNY79_12280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030170 - pyridoxal phosphate binding
                     [Evidence IEA];
                     GO_process: GO:0019346 - transsulfuration [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent transferase"
                     /protein_id="HWX73272.1"
                     /translation="FGACLSPTNAFHLLQGVETLALRMERHMENTAAVLAFLQKNAAV
                     EWVLHPSLASHPDHALAQKLLPKGAGSIVSFGIKGGRAAGRKFIEAVRLASHLANVGD
                     AKTLVIHPASTTHQQMDAAALKAAGVGEELVRLSIGLEAASDILDDFAQALRASQRA"
BASE COUNT          402 a          852 c          824 g          354 t
ORIGIN      
        1 ggcggaggga gagaacacga cccatttctc cgtggtggac agtttcggca acgcggtcgc
       61 gaatacctac acgctcaact tcagctacgg agtcggcctc gtcgccgccg ggaccggcgt
      121 cctgctcaac aacgagctcg acgatttcgc cgccaagccg gacgcgccga acgcctatgg
      181 cctgctcggc taccaggcga atgcccccgg accgggaaag cggccgctgt cgtcgatgac
      241 gccgacgatc gtgctcaagg acggcaagcc gttcctggtc accggttcgc cgggcggcag
      301 cctcatcatc aacgcggtgc tgcaggtcgc cgtcgacgtg atcgaccgcg gcatggatat
      361 cgccgccgcg gtctcggcgc cgcgcgtgca caatcagtgg atgcccgacc tgattttcgc
      421 cgagccgggc gttgccgccg atctcattgc cgcgctcgaa gcgcgcggcg acaaggtcat
      481 ggtgcggcgc ctgccgacgt cggccaactc gattctagtc gcgcccacgg gccttgtcgg
      541 cgccgccgat ccgcgctcgc gtggcgcgct cgcggcggga tattgagcgc gcgcaccagc
      601 cttcaaacga agcgccatcc cttcgtgccg cgcgcgaccg ccaccatccg gatcagaaac
      661 gcggtcgaaa tggtcacgat cacgccgatc ttgatctcgt cgggctgcag ccgttcgccc
      721 tcccagccca ggaagacggc aagggcgagc ccgcaaacgg cggcgatctc ggggtagagt
      781 tccccgccca aattcgcggt cacccggtcg tggcgataca gatcccgcat cagaccgccg
      841 aacgatgcgg tgatgaccgc cgctattggc ccccacaacc agagtggttg ggcggaggtg
      901 tccagcgcga ccacgacgcc caccaacgaa agcgacgcaa agacaagcca cgacagcaag
      961 cttcgttggc ggcctgcgct gtggagtccc gccaatcttc gtcgcggccg gggaatcacg
     1021 atccgcactc tgctgatgac cgaggatcaa gtgccaacga gagcagcgcg ccacagcgtg
     1081 tcttcaaatg gccgtcgggg caagcaatgc cggcgtcatc gcgccgggga tcggacggtc
     1141 cgcgcgtccc ggacgctgcg ctggcctcac gcgcgcagcg cggcgagtac ctcttcgggg
     1201 cgctcgctca tcagcatgtg gccggcgccg tcgagcaccg tgacgcgtcc agccggcatg
     1261 gcggcggcga cggccttgcc gctcttggcc ggcgtcatca catcgcggct gccgaggatc
     1321 acggccgccg gcacggtcac cttggcggcg gcggctagcg cgtcgcggta ttcgttgcag
     1381 gcggcgaggt cggtgaacaa cacgccgggc cgggcgcgct cgagcaggcg ctcggccccg
     1441 cccagcatcc acagccccgg cgccagcgag ccgccgatgg tcgcgtggta gccgttgccc
     1501 cagatcgcga ccatgtcgat ggcggcgtgg tcgttggcct tggcggcatt gagaagatcg
     1561 gccgaaaccg tcatcgccgc cgcggtcgcg atcaggccga ggccgttgac cttgtccggg
     1621 tggcgcgcgg cggtttccag ggcgatgagc gagcccatgg aatgaccgac gagccgcgcc
     1681 gtgcgcgcgc cggcagcatc gacgagcgcc gccgtccagt ccgccagtgc ggcaatcgaa
     1741 gcaagcggcg cgccggccga gcggccatgc cccggaaggt caggcgcgag cacgccacag
     1801 ccgtgatgcg cgaacgcacg ggcaagcagc gcccagaccg aatgatcgag gccggcgccg
     1861 tgcaggaaaa cgaccgccgg cagccccgga tcgaattcac gcccgccggt cccgacgtag
     1921 gtttcgttgc cgtcaacaat aatgcgcatg gctcaagccc gctgcgaggc gcgcagcgcc
     1981 tgggcgaaat cgtcgaggat gtcgcttgcc gcctcgagcc cgatcgagag gcgcaccagt
     2041 tcctcgccga ccccggcggc cttgagcgcc gccgcatcca tctgctggtg cgtggtgctc
     2101 gccggatgga tgaccagcgt cttggcgtcg ccgacattgg cgagatggct cgcgagccgc
     2161 accgcctcga tgaatttgcg cccggcggcg cggccgccct tgatgccgaa gctgacgatc
     2221 gagcccgcgc ccttcggcaa cagcttctgc gccagcgcgt ggtcgggatg gcttgcgagc
     2281 gaagggtgca acacccattc gaccgccgcg ttcttctgca ggaaggcgag caccgccgcc
     2341 gtgttttcca tgtgccgctc catgcgcaga gcgagcgtct ccacgccctg cagcagatgg
     2401 aaggcgttgg tcggcgacag gcaggcgccg aa
//
LOCUS       DATMQB010000430         5273 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1157817, whole genome shotgun sequence.
ACCESSION   DATMQB010000430 DATMQB010000000
VERSION     DATMQB010000430.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5273)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5273)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5273
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1157817"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..241
                     /locus_tag="VNY79_12285"
     CDS             <1..241
                     /locus_tag="VNY79_12285"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HWX73273.1"
                     /translation="TPYAAPLDRLRNYMLMLGKQGLPPERIGEAVRHALTAAKPKVRY
                     TVTPTPVQNWLATNLPKRVVDRMVGSRLGLLPKKG"
     gene            complement(348..1474)
                     /gene="dprA"
                     /locus_tag="VNY79_12290"
                     /pseudo
     CDS             complement(348..1474)
                     /gene="dprA"
                     /locus_tag="VNY79_12290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611229.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_process: GO:0009294 - DNA-mediated transformation
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-processing protein DprA"
     gene            complement(1788..2420)
                     /gene="plsY"
                     /locus_tag="VNY79_12295"
     CDS             complement(1788..2420)
                     /gene="plsY"
                     /locus_tag="VNY79_12295"
                     /EC_number="2.3.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009340931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0008374 - O-acyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0006654 - phosphatidic acid biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HWX73274.1"
                     /translation="MLQPLDWPPALAYAAALVFGYLCGSIPFGLLLTRLAGGPDIRAI
                     GSGNIGATNVLRTGRKGLAAATLIGDMLKGTVAVLLAAAALGKDAAIAAALGAFLGHL
                     FPVWLNFRGGKGVATYIGVLLGLAWPAAIVFCAIWLAVAALTRYSSLAALIASAATPV
                     FLWWQGGRLIGQAFLLLTVLLWIMHRANVARLLRGDESKIGAGAQAVGDS"
     gene            complement(2541..3983)
                     /locus_tag="VNY79_12300"
     CDS             complement(2541..3983)
                     /locus_tag="VNY79_12300"
                     /inference="COORDINATES: protein motif:HMM:NF014749.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73275.1"
                     /translation="MTKSQPLTRHIVSINDLSNKEIEIIFQVAHGFLKELADPGHAHR
                     IGRGTSIASKQILASLFYEPSTRTRLSFESAMLRLGGDKITSADPAVSSAAKGESLAD
                     TIRVIGNYADIIVIRHPRDGAARLAAEYSQIPVINGGDGSHEHPTQTLCDLFTLRSKN
                     KSFRKMKIAIAGDLKGSRTIHSFVYALARFGATIDPLPAPGMELPAHVDRRLREEFHC
                     RMISKAPGQPDGGAIDALYVTADQPHQLSLYAEPEIDYGLVLQKKIDAVYVTRFQKER
                     WTEKERPYPKIDAKFLGHPKYSEASVMHPLPRVNELDASLDTDRRAIYFRQAAYGVPV
                     RMALISLLLQLNKDKTLQRHPGGFDKAEHRLYVQPIGTGVQCANANCITCDPAERQYA
                     ANKFYLVEEPPSPGSKLRCLYCETDIDEEAAARFVVGDTVRKTYSPGLSVLARVPVEK
                     LKHLVIYGSEAEAVAAGLQQRDNGKRVRTG"
     gene            4117..>5273
                     /locus_tag="VNY79_12305"
     CDS             4117..>5273
                     /locus_tag="VNY79_12305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007611219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX73276.1"
                     /translation="MSTALQFDTHEIFNQSPPYEDIDLFSTDAPLVDAVKANGAGGET
                     AALSAFGRQWGAAEMFALGRRANENPPKLYTFNPKGFRRDVVEFHPAYHELMRASIAA
                     GLHASTMTPAGKRAAPPAEVARAARYYMAAQVESGHLCPITMTRAALAALAAEPELLA
                     QVAPKVVARSYDPTFRPWTEKSGMTLGMGMTEKQGGTDVRANTTAAAPSGDSYVVTGH
                     KWFLSAPMCDAFLVLAQAPGGLTCFFVPRFRPDGSVNALRLQRLKDKLGNRSNASSEV
                     EFAGAFALRIGAEGAGVRTIIQMVQLTRLDCALASSGFMRMALTQAVHHSRYRTVFQK
                     HLYDQPMMRAVLADLALEVEGAVALAMRLARAFDRAGEDAREAAYARLVTPA"
BASE COUNT          875 a         1731 c         1813 g          854 t
ORIGIN      
        1 caccccctac gccgcgccgc tggaccgcct gcgcaactac atgctgatgc tgggcaagca
       61 gggcttgccg ccggagcgga tcggcgaggc ggtgcgccac gcgctcaccg ctgcaaaacc
      121 caaggtccgc tacacggtga ccccgacgcc agtgcagaat tggctcgcga ccaatctgcc
      181 caagcgcgta gtcgatcgga tggttggtag ccggctcggc ctgttgccga agaaaggata
      241 acgccaagga gctgaagctt tggcccggat gagcgaagcg acatctggga ctaaggcggc
      301 gggaaactcg cacccgcatc tcgctacgct catgcggact tacgctttta cgtcagcgag
      361 accaatccgc cgccgtggcg ctcgagacgt cccgcgatct ccagctcgag caacaccatt
      421 cgcaccaccg acggcgagct tttcgacaga cgcaccagat catcgatcag caccgcggtc
      481 gggccgagca gggcgaggac gcgcgtgcgc tcgtcaggcg ccgggtccgt cccctcgaag
      541 aagccgcctt cggcgggttg cggctctgct tcctgcctgg gtacgtttct ctgctccatg
      601 atcggctgca gcacggtgac gatgtcggac gtttcagtga ctggcgtcgc gccctgtttg
      661 atgaggccat cccctcggcc cgcggatcga gcggtgagcc gggcacggcg aacacctcgc
      721 gcccctgctc gagcgcaaag cgcgcggtga tcagggagcc ggagcgcttg gccgcctcga
      781 cgatgacgac gccgagcgac agcccggaaa tcagccggtt gcgctgcggg aaatcgcgcc
      841 cgcgcggctc ccatccgagc ggcatttccg acagcgccgc gcctgcggac aaaatgtcgt
      901 cgagcagctc catatgctcg gccggataga cgcggtcgtg cccgccggcg agcaccgcga
      961 tcgttccggt cgcaagcgac gtacggtgcg ccgccgcgtc gatgccgcgc gcgaggcccg
     1021 agaccacggc gaagccggcc tcgccgagct cgcgcgcgat ccgctgggtg aatttcatgc
     1081 cggcgccgga ggcgttgcgc gaaccgacga cggcgaccat cggcagcgcg aacgccgccg
     1141 cctggccgcg gattgccacg aggggcggcg catcgtcgat catctgcagc cgcggcggat
     1201 agccgggttc gcccaaggcc acgagcgcga cgccaagctt ttccgccgcc gcgatctcgc
     1261 gctccgcgtc ggcgcgcgag cagacttgcg tcgcgccgcc ggcgccgccg cgccgcgcca
     1321 gtgacggcag cgcctcgagc gcggcgcgcg cgccgccgaa atgattgacg agggtgcgga
     1381 acgtgcgcgg gccgacattc gggctgcgga taaggcggag ccagtcgagg cgctgctcgt
     1441 cggtcaggcg gacaccctgt ctgacttggt tcacaccgcc ccacgctcac ttgaagcgca
     1501 ttcgtgcttg cggaagcata gccgaaaata tggggcgcgc ccgatcgcgg ctggcctcta
     1561 ccaagtcgtc tttcgtcgtc ctgaggtgcg agccaacggg tcccgcccga aggggcgcgc
     1621 tcgatgataa actccgcgag tctcgaagga ggaggacggc atccaagtcg gctgttgccg
     1681 acttggacac taacattttt cgaaaccgcc aaagccgatt tcgattggcg ccccggccgc
     1741 atccttcgag ggccgctttg cgggcgcctc agcatgacgg aacgcagtca tgaatcgccc
     1801 acggcttgtg cgccggcgcc gatcttgctc tcgtcgccgc gcaggagccg cgcgacgttg
     1861 gcgcggtgca tgatccagag cagcacggtg aggagcagaa atgcttggcc gatgagccgg
     1921 ccaccctgcc accacaaaaa caccggcgtc gcagcgctgg cgatgagggc ggcgagcgag
     1981 gaatagcggg tcagcgcggc gaccgcgagc cagatcgcgc agaagacgat cgccgcgggc
     2041 caggcgaggc cgaggagcac gccgatatag gtcgccaccc ccttgccgcc gcggaagttg
     2101 agccagaccg gaaagaggtg gccgagaaac gcaccgagcg ctgccgcgat ggcagcatct
     2161 ttgccaagcg cagcggcggc cagcaggacc gcaacggtgc ccttgagcat gtcgccgatg
     2221 agtgtcgcgg cagcgagccc cttgcggcca gtgcgcagca cgttcgtggc gccgatattg
     2281 ccggagccga tggcgcggat atcggggccg ccggcgagcc gcgtcagcag gagcccgaac
     2341 gggatcgagc cgcacagata gccgaagacg agggctgcgg cgtaggcgag cgcgggcggc
     2401 cagtcgagag gctgtagcat gacaccttcc gctcctcgtg cggtctcaag tctggcacga
     2461 ggcgcgcgct gcggaaaagc tggtcgccgc tttcgccggg gcagcacaag atcaggggct
     2521 tgttgcgggc ttcaccgtgg ctagccggtg cgcaccctct tgccgttgtc gcgctgctga
     2581 aggccggccg ccaccgcttc ggcttcgctg ccgtaaatga cgaggtgctt gagcttctcg
     2641 acaggcaccc gcgcgagcac gctcaatccg ggggaatagg tcttccgcac cgtatcgccg
     2701 acaacgaaac gggcggcggc ttcctcgtcg atgtcggtct cgcaatagag gcagcgcagc
     2761 ttggagcccg gcgaaggcgg ctcctcgaca agatagaatt tgttggcggc gtattgccgt
     2821 tcggctggat cgcaggtgat gcagttcgcg ttggcgcatt ggacgccggt gccgatcggc
     2881 tgcacgtaga ggcgatgctc ggccttgtcg aagccgccgg gatgccgctg cagggtcttg
     2941 tccttgttga gctgcagcag cagcgaaatc agcgccatgc gcaccggcac gccgtaggcg
     3001 gcctggcgga agtagatggc gcggcggtcg gtgtcgagcg aagcatcgag ctcgttgacg
     3061 cgcggcagcg ggtgcatgac gctcgcctcc gaatatttcg ggtggccgag gaatttggcg
     3121 tcgatcttcg ggtagggccg ctccttctcg gtccagcgct ccttctggaa gcgggtgacg
     3181 tagaccgcgt cgatcttctt ttgcaggacc agcccgtagt cgatttccgg ttcggcatag
     3241 agcgaaagct ggtgcggctg gtcggcggtg acgtagaggg cgtcgatcgc gccgccgtcg
     3301 ggctggccgg gcgccttgga gatcatccgg cagtgaaatt cctcgcgcag ccggcggtcg
     3361 acgtgcgccg gcagttccat tcccggcgcc ggcaagggat cgatggtggc gccgaaccgc
     3421 gccagcgcat agacgaagga atggatggtg cggctgccct tgaggtcgcc ggcgatggcg
     3481 atcttcattt tcctgaagct cttgttcttc gaccgcagcg taaagaggtc gcacagcgtc
     3541 tgcgtgggat gctcgtggct gccgtcgccg ccgttgatca ccggaatctg cgaatattcc
     3601 gcggcgagcc gtgcggcgcc gtcgcgcggg tggcggatga cgatgatatc ggcgtaattg
     3661 ccgatgaccc ggatggtgtc ggcgaggctc tcgcccttgg cggccgagct cacggccgga
     3721 tcggcgctgg tgatcttgtc gccgccgagc cgcagcatgg cgctctcgaa cgagagccgc
     3781 gtgcgcgtcg aaggctcgta gaacaggctc gccaggatct gcttggaggc gatgctggtg
     3841 ccgcgtccga tgcgatgggc gtggccggga tcggccaatt ccttgagaaa tccgtgggcc
     3901 acctggaaaa tgatctcgat ctccttgttg ctgagatcgt tgatcgagac gatatggcgc
     3961 gtcagcggct gggatttcgt catcaaagcg ctgctatagg cccaatcgga gcgcacgggc
     4021 aagtccgctc tggcgccctc gggcggcgat gcaccgaaaa ctcggagccg ctatgatcac
     4081 gccacgatac ctcgcccgat cccggtggag cgcgctatga gcaccgccct gcaattcgat
     4141 acgcacgaga ttttcaatca gtcgccgcct tacgaggaca tcgacctgtt ttcgaccgat
     4201 gcgccgcttg tggacgcagt caaggcgaac ggcgccggcg gagagaccgc ggccttgtcc
     4261 gccttcgggc ggcaatgggg tgccgcggaa atgttcgcgc tcgggcgccg tgccaacgaa
     4321 aatccgccga agctctacac cttcaacccg aagggctttc gccgcgacgt cgtcgagttc
     4381 catccggcct accacgagct gatgcgggcg agcatcgcag caggactgca tgcctcgacc
     4441 atgacgcctg cgggcaagcg cgccgcgccg ccggcggagg tggcgcgcgc cgcgcgctat
     4501 tacatggccg cccaggtcga gagcggccac ctctgcccga tcaccatgac gcgagccgca
     4561 ctggcggcgc ttgccgccga gccggagctg cttgcccagg tcgcaccgaa ggttgtggcc
     4621 aggagctacg acccgacgtt tcggccctgg acggaaaaat ccggcatgac gctcggcatg
     4681 ggcatgaccg agaagcaggg cgggacggac gtgcgcgcca acaccacggc cgccgccccc
     4741 tcgggcgatt cctatgtcgt taccggccac aaatggtttc tctccgcgcc gatgtgcgac
     4801 gccttcctgg tgctggcgca ggcgccgggc gggctcacct gcttcttcgt gccgcgcttc
     4861 cgtcccgatg gctcggtcaa cgcgctgcgg ctgcagcgcc tcaaggacaa gctcggcaac
     4921 cgctccaatg cgtcgagcga agtcgagttc gccggggctt tcgccttgcg catcggcgcc
     4981 gaaggcgccg gcgtgcgcac catcatccag atggtacagc tgacgcggct cgattgcgcg
     5041 ctcgcctcgt cgggcttcat gcgcatggcg ctgacgcagg cggtgcacca cagccgctac
     5101 cgcaccgtgt tccaaaagca cctctacgac cagccgatga tgcgcgcggt gctggccgat
     5161 ctcgcgctcg aggtggaagg cgcggtggcg cttgccatgc ggcttgctcg cgcgttcgac
     5221 cgcgccggag aagacgcgcg cgaggccgcc tatgcgcgcc tggtcacgcc ggc
//
LOCUS       DATMQB010000431         2534 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1158143, whole genome shotgun sequence.
ACCESSION   DATMQB010000431 DATMQB010000000
VERSION     DATMQB010000431.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2534)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2534)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2534
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1158143"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..297)
                     /locus_tag="VNY79_12310"
     CDS             complement(<1..297)
                     /locus_tag="VNY79_12310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018641785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HWX73277.1"
                     /translation="MRYLHTMLRVRNLDAALDFYCNKLGLTEVRRRIDEKNKYTLVFL
                     AAAGDGELVGKGADGRGAPTVELTYNWNAEDYGEARYFGHLAYEVDDIYALCAKL"
     gene            377..1135
                     /locus_tag="VNY79_12315"
     CDS             377..1135
                     /locus_tag="VNY79_12315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015686270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Sir2 family NAD-dependent protein deacetylase"
                     /protein_id="HWX73278.1"
                     /translation="MRDLDRPAARLREMVQAAEVIVPFTGAGISTECGIPDFRSPGGI
                     WTKYQPIPFDEFLASQDARNESWRRRFAMNEQLTAAQPGRGHHALASLYRAGKVPALV
                     TQNIDNLHQASGIAAEHVVELHGNTTYALCLDCAKRYELAWVRARMEAGNGCAPDCTD
                     CGGYIKTATTSFGQAMPDSAMRRAEELTLSCDLFLSIGSSLVVWPAAGFPLLAKRNGA
                     RLIIINREPTDFDDIADLVVHEDIGTVLEPFIVH"
     gene            1289..1885
                     /locus_tag="VNY79_12320"
     CDS             1289..1885
                     /locus_tag="VNY79_12320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005829 - cytosol [Evidence IEA];
                     GO_function: GO:0001072 - transcription antitermination
                     factor activity, RNA binding [Evidence IEA];
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003723 - RNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HWX73279.1"
                     /translation="MVSDGIESKSTSAGLRAGVDFADETATHVIEVAGVIKWFDVAKG
                     YGFIIPDNGMADVLLHVTVLRRDGYQTAYEGARVVCEVLARPKGLQAFRVVSMDESTA
                     IHPAQMPPPRTHVTVTPTSGLERAQVKWFNRLRGFGFLTRGEGTPDIFVHMETLRRFG
                     MTELRPGQFLLVRFGPGPKGLMAAEVHPEGGPLGLASH"
     gene            1948..2388
                     /locus_tag="VNY79_12325"
     CDS             1948..2388
                     /locus_tag="VNY79_12325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018457758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF192 domain-containing protein"
                     /protein_id="HWX73280.1"
                     /translation="MLAAVALVAVIAAAPVQAAGEATIEIISKSGVHAFAVELATNED
                     ERSRGLMFRKQLPDGHGMLFDFEQDRPVAFWMHNTYISLDMIFITGDGHILRIAESTE
                     PLSDRLIPSGGPVRAVLEVIAGTARKDGIAPGDRVTGSIFGGRR"
BASE COUNT          413 a          826 c          822 g          473 t
ORIGIN      
        1 gagcttggcg cacagcgcgt aaatgtcgtc gacctcgtag gcgagatggc cgaaatagcg
       61 cgcttcgccg tagtcctcgg cgttccagtt gtaggtgagt tcgaccgtgg gggcgccgcg
      121 gccgtccgcg cccttgccga cgagctcgcc atcgcccgcc gccgccagga acacgagcgt
      181 gtacttgttc ttttcgtcga tccgccggcg cacttccgta agcccgagct tgttgcagta
      241 aaagtcgaga gccgcgtcga gattacgcac gcgcagcata gtgtgcagat accgcatggt
      301 gagacctccg ctgggcgggg atgccgctcc cttcttacta ggtatgatag ggccgcggga
      361 ggtgcgaacg atgatcatgc gcgaccttga ccgaccggcg gcgcgtctgc gcgagatggt
      421 gcaggctgcc gaggtgatcg tgccgttcac cggcgccggc atctccacag aatgcggcat
      481 tcccgatttc cgctcgccgg gcgggatctg gaccaagtac cagccgattc cgttcgacga
      541 attcctggca agccaggacg cgcgcaacga atcctggcgg cggcgctttg ccatgaacga
      601 gcagctgacg gcggcgcagc ccggacgcgg ccaccacgcg ctcgccagcc tctatcgcgc
      661 cggcaaggtg ccggcgctgg tcacgcagaa catcgacaat ctgcatcaag cctcgggcat
      721 cgcggccgaa cacgtcgtcg aactgcacgg caatacgacc tacgctctgt gcctcgactg
      781 cgccaagcgt tacgaactcg catgggtgcg cgcgcggatg gaagcgggca acggttgcgc
      841 tccggactgc accgactgcg gcggctacat caagactgcg acgacctcgt tcgggcaggc
      901 gatgcccgat tccgcaatgc ggcgcgcgga agaactcacg ctgtcatgcg atctatttct
      961 gtcgatcggc tcctcgctcg tggtctggcc ggcggctgga tttcccttgt tggccaagcg
     1021 taacggcgcg cgattgatca tcatcaatcg cgaaccgacc gacttcgatg acatcgccga
     1081 tctcgtggtg cacgaggaca tcggaacggt gctcgaaccg tttatcgtcc attgactcgc
     1141 ccgctatcca ccggttttca caggctgtga ctcttttggg ccactgttgc atttttgtcc
     1201 tttcgcgcgg gatggtcggt gttatcttcg atttgcagat tcgtcgaagc gcccgtgggg
     1261 cgccaggcag ggcggcggcc acggcgtcat ggtgtcggac gggatcgaat caaaatcaac
     1321 cagtgccggg ctcagagccg gcgtcgactt cgctgacgag acggcgaccc acgtcatcga
     1381 ggtggccggc gtcatcaagt ggttcgacgt cgccaagggc tatggcttca ttattcccga
     1441 caacggcatg gccgacgtgc tgctgcacgt gaccgtcctg cgccgcgacg gctaccagac
     1501 cgcttatgaa ggcgcgcgtg tcgtctgcga agtgctggcg cggccgaaag gcctgcaggc
     1561 cttccgcgtc gtctcgatgg acgagtcaac ggcgattcat ccggcgcaga tgccgccgcc
     1621 gcgaacccat gttactgtga cgccgacgag cggtctcgaa cgggcgcagg tcaaatggtt
     1681 caatcggctt cgcggcttcg gctttctgac gcgcggcgaa gggacgccag acattttcgt
     1741 gcacatggag acgctgcgcc gtttcggcat gaccgagttg cggcccgggc aattcctcct
     1801 ggtccgcttc ggaccgggtc cgaagggcct catggccgcc gaagtgcacc ccgaaggcgg
     1861 cccgctcggt ctcgcttccc actagcggcg gcccttatcg ctggagttgc acgcagattc
     1921 gcgttttggt tgtggccggc ggccgcgttg ctcgccgccg ttgccctggt cgccgtcatc
     1981 gccgctgcgc cggtgcaggc tgccggcgag gcgaccatcg agatcatcag caagagcggc
     2041 gtccacgcct tcgcagtcga acttgccacc aacgaggacg agcgctcccg cggcctcatg
     2101 ttccgcaagc agttgccgga cggccacggc atgctgttcg atttcgagca ggaccggccg
     2161 gtggccttct ggatgcacaa cacctacatc tcgctcgaca tgatcttcat caccggcgac
     2221 ggccacatcc tgcgcatcgc cgaaagtacc gagccgctct cggaccgcct catcccctcc
     2281 ggcggcccgg tgcgcgccgt gcttgaggtg atcgccggca ccgcgcgcaa ggacggcatc
     2341 gcgcccggcg accgcgtgac cggctcgatc ttcggcggcc gtcgctgagc gggcggcgat
     2401 tcggtttcgg ggcgcggcca aggaggcgct ccgccttgct ggcagtaacc gaagcatgta
     2461 tccgttgccc cgccgagcgg ggtatagcgc agcctggtag cgcggcagtt ttgggtactg
     2521 caggtcgcag gttc
//
LOCUS       DATMQB010000432         3494 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3634595, whole genome shotgun sequence.
ACCESSION   DATMQB010000432 DATMQB010000000
VERSION     DATMQB010000432.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3494)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3494)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3494
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3634595"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..479
                     /locus_tag="VNY79_12330"
     CDS             <1..479
                     /locus_tag="VNY79_12330"
                     /inference="COORDINATES: protein motif:HMM:NF014564.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0008410 - CoA-transferase activity
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="CoA transferase"
                     /protein_id="HWX73281.1"
                     /translation="RGYYTTDGFIFIAVGNDKLFALFASVLGHPEWVQDPRFRGNPER
                     VHNSVELYRMIEEAVGTFTIAELQQALDAAGVPNAPMQSIDQALAHEQTQALGILQQS
                     PDGKIALIGSPLSFDGVRLPFRLSPPALGAHTAEILVGDAKGETNSDTKTPQKAQG"
     gene            476..1270
                     /locus_tag="VNY79_12335"
     CDS             476..1270
                     /locus_tag="VNY79_12335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase-related protein"
                     /protein_id="HWX73282.1"
                     /translation="MRRDYITLRTETVDGHVLLVTLNRPEVSNAINTQMGRDLLDLWS
                     GLIAAPGDVRAVVLTGAGDRAFCAGGDLKERDGMTREKWQAQHEIFERQYWMLLDCPV
                     PVIGAANGHAFGGGLELLLACDFFYAARTARFALTEVTLGIMPGAGGTQFLPRAAGER
                     RAKEIIFLGKPFTADDAVQWGLANRLCETSTVVAEAVSTARGVAANAPLSIRQAKKSI
                     HHGLDMDLKSALLYEIEAYNRLVITEDRLEGVRAFNEKRKPAFKGR"
     gene            1303..2247
                     /locus_tag="VNY79_12340"
     CDS             1303..2247
                     /locus_tag="VNY79_12340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA lyase"
                     /protein_id="HWX73283.1"
                     /translation="MKPGIDVSVREVGLRDGIQNISAFMPTAAKLEWLAAEARAGMSE
                     IEVCSFVPPKVIPQFADATEVAARALAIDGLTVAALIPNRKGAERGIAAGVHKLDFVM
                     SVSASHNRANVRRSREESLADFATVATLIRGLDPSKRPGLAAGLSTAFGCTIEGQIPE
                     QDVVRYAAALAETGAGEICLADTVGYADPASVRRLFTAVQAAVKPLPVAAHFHDTRGL
                     GLANALAALDTGVTRFDACLAGLGGCPFAPGASGNIVMEDLVFMLEGMGLRTGVDIDR
                     LIAVRAILERALPNVPLQGAIAKAKLPKGFYARPIAAE"
     gene            complement(2541..3011)
                     /locus_tag="VNY79_12345"
     CDS             complement(2541..3011)
                     /locus_tag="VNY79_12345"
                     /inference="COORDINATES: protein motif:HMM:NF024844.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MaoC/PaaZ C-terminal domain-containing protein"
                     /protein_id="HWX73284.1"
                     /translation="MEREPEQLFLDDFSAGQTYPGQPRTITKDDILSFAALTGDAHPI
                     HYDDEYAKSTRFGRPIVHGLHLMALTALGATPLSAQLADSMIAMLEQQATFRKPAFKD
                     DTLRPQIEIEAIDRLPGKDWGKLAMKVRLINQREEIVLEGRHVYMVRCRTESKK"
     gene            complement(3049..>3494)
                     /locus_tag="VNY79_12350"
     CDS             complement(3049..>3494)
                     /locus_tag="VNY79_12350"
                     /inference="COORDINATES: protein motif:HMM:NF014081.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HWX73285.1"
                     /translation="TTLLCARLAEEHGAFDRFIMGTDTPTGSGVMPLGLLYTIAHCAS
                     LTRMAPERFVCAATGSNARVYRLDSGFLAAGKAADIVLLDAPDGGTQRTALAAIKNGD
                     IAAIGGVVTAGVPRFIGRSRNTPAATRKARVLRSAVMQDFSAAAH"
BASE COUNT          594 a         1133 c         1182 g          585 t
ORIGIN      
        1 cccgcggtta ctacacgacc gacggcttca ttttcatcgc cgtcggaaac gacaagctgt
       61 tcgcgctgtt cgcgagcgtg ctcggccatc cggaatgggt gcaggaccca cgttttcgcg
      121 gcaatccgga acgcgtccac aacagcgtcg aactttaccg gatgatcgaa gaagccgtcg
      181 gcacgttcac gattgccgag ttgcagcaag cgctggatgc agccggcgtg ccgaacgcgc
      241 cgatgcagag catcgatcag gcgctcgccc acgagcagac ccaggcgctc gggatcctgc
      301 agcaaagtcc cgacggcaag atcgccctga tcggatcgcc gctgtcgttc gacggcgtgc
      361 gcctgccgtt ccggctctcg ccgcccgcac tcggagcgca caccgcggag atcctggtcg
      421 gcgacgccaa gggtgagacc aacagcgaca ccaagacgcc gcaaaaggcg cagggatgag
      481 gcgcgactac atcacgctgc gcacggaaac ggttgacggc catgtgctgc tggtgacgct
      541 caatcgcccg gaagtcagca atgcgatcaa cacgcagatg ggccgcgatc tgctcgatct
      601 ctggtcgggg ctgatcgcgg cgccgggcga tgtgcgcgcg gtcgtgctga ccggcgctgg
      661 cgaccgcgcc ttctgcgccg gcggcgatct caaggaacgc gacggcatga ccagggagaa
      721 gtggcaggcg cagcatgaga ttttcgaacg acaatactgg atgctgctcg attgcccagt
      781 gccggtgatc ggcgccgcga acgggcatgc gttcggcggc ggtctcgaac tcctgctcgc
      841 gtgcgacttc ttctacgccg ccaggaccgc gcgcttcgcg ctgaccgaag taacgctcgg
      901 gatcatgccg ggggcagggg ggacgcagtt cctgccgcgt gcggcgggcg agcgccgcgc
      961 caaggagatc atctttctcg gcaagccgtt cacggccgat gatgcggtcc aatggggatt
     1021 ggcgaaccgg ctgtgcgaaa cctcaaccgt cgtcgccgag gcggtatcga ccgcccgcgg
     1081 ggtcgccgcg aatgcgccgc tgtcgatccg ccaggcgaag aagtcgatcc accacggcct
     1141 cgacatggat ctcaagagcg cgcttcttta cgagatcgag gcctacaacc gtctggtcat
     1201 caccgaggat cgcctggaag gcgtccgtgc gttcaacgag aagcgcaagc cggcgttcaa
     1261 gggccgctga ccggcgccct ggcggagacg gagacaagcg cgatgaagcc gggcattgac
     1321 gtgagcgtgc gcgaagtcgg gttgcgcgac ggcatccaga acatttcggc gttcatgccg
     1381 accgccgcca agctcgaatg gctcgcggcc gaagcccgcg ccgggatgag cgagatcgag
     1441 gtctgctcgt tcgtgccgcc gaaggtgata ccgcagttcg ctgacgcaac cgaagtcgcg
     1501 gcgcgtgcgc ttgcgatcga cggcctgacc gtcgccgcgc tgatcccgaa ccgcaagggc
     1561 gccgagcgcg gcatcgccgc cggcgtgcac aagctcgact tcgtcatgtc ggtcagcgct
     1621 tcgcacaacc gcgccaatgt gcgccgctcg cgcgaggagt cgctcgccga cttcgccacc
     1681 gtggccacgc tgattcgcgg cctcgacccg tcgaagcggc cggggctcgc cgccggattg
     1741 tcgacggcat tcggctgcac gattgaaggg cagattcccg agcaggacgt ggtgcgctat
     1801 gcggcggcgc tggccgaaac cggagcaggc gaaatctgcc tcgccgatac ggtcggctat
     1861 gcggatcccg cgtcggtgcg ccggctcttc acggccgtcc aggccgcggt caagccgctg
     1921 ccggtcgccg cgcacttcca cgatacgcgc gggctcggcc ttgccaacgc gctcgccgcc
     1981 ctcgacaccg gcgtcacgcg cttcgacgcc tgtctcgccg gtctcggcgg ctgcccgttc
     2041 gcgccaggcg cgtcgggcaa catcgtgatg gaagacctgg tattcatgct ggaggggatg
     2101 ggcctgcgga ccggggtcga catcgaccgg ctgatcgccg tgcgtgcgat cctggagcgg
     2161 gcgttgccga acgttccgct gcaaggagcg atcgccaagg ccaagctgcc taaggggttt
     2221 tacgcgcggc cgattgcggc cgagtagggc tgtgtctcgg caagcacacg gggcgtcgtc
     2281 cggtcccaga cctaacgtcc tcgtccactg tgacctttgc gttacagccg ccgcgctcgg
     2341 caatgagtac agtgcagtcc aatgagacgg gggcggcggt ggtcccgtgg cgctggtgtc
     2401 gggggtgcgg cgcccgggac gaccccgcag cgataaacgt gcaagattag caagctcgct
     2461 ggatcgggtt aacttacttt catcttcgtc atgacattcg gcccgggcca gagagagccc
     2521 cgacgcagta gcgtcggggc tcactttttt gattcggtgc ggcagcggac catgtacacg
     2581 tgccggcctt cgagcacgat ttcctcgcgc tggttgatca ggcgtacttt catcgccagc
     2641 tttccccaat ccttgcccgg cagacggtcg atcgcctcga tctcgatttg cggccgcaag
     2701 gtgtcgtcct tgaacgccgg ctttcgaaaa gtggcctgct gctccagcat ggcgatcatc
     2761 gaatccgcga gctgcgcgga caatggcgtc gcgccgagcg cagtcagcgc catgaggtga
     2821 agcccgtgaa cgatcggccg gccaaatcgc gtcgatttgg cgtattcatc gtcgtagtgg
     2881 atcggatgcg cgtcgccggt cagggcggcg aacgaaagaa tgtcatcctt ggtgatcgtg
     2941 cgcggctgtc ccgggtaggt ttgcccggcg ctgaaatcgt caagaaagag ttgctcgggc
     3001 tcgcgctcca ttactgctcc taatgttggg cgcgactgtc gccttgggct aatgcgccgc
     3061 cgctgaaaaa tcctgcatca ccgctgaacg caacacccgc gccttgcgcg tggcggccgg
     3121 cgtattccgg ctgcggccga tgaagcgggg cacgccggcc gtcaccaccc cgccgatcgc
     3181 agcaatgtcg ccgttcttga tggcggcaag cgcggtgcgc tgcgtgccgc cgtcgggcgc
     3241 gtcgaggagc acgatgtcag cagccttgcc ggcggcgagg aagccggaat cgaggcgata
     3301 cacgcgcgca ttactgccgg tcgccgcgca gacgaaacgc tccggcgcca tgcgggtcag
     3361 gctcgcacaa tgcgcgatcg tgtacagcag gccgagcggc atgacgcccg aaccggtcgg
     3421 cgtgtcggtc cccatgatga agcggtcgaa ggcgccgtgt tcctcggcga gccgcgcgca
     3481 caaaagcgtg gtgc
//
LOCUS       DATMQB010000433        28558 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2093685, whole genome shotgun sequence.
ACCESSION   DATMQB010000433 DATMQB010000000
VERSION     DATMQB010000433.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 28558)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28558)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28558
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2093685"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2175)
                     /locus_tag="VNY79_12355"
     CDS             complement(<1..2175)
                     /locus_tag="VNY79_12355"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3971 domain-containing protein"
                     /protein_id="HWX73286.1"
                     /translation="MTMQHRQSAVAPLWERFADPRRLLKLFSFDRGLRPGKGASMHIY
                     WGVFARHQRLIRRGGIVIAALAALVTLGAAGLWWRLASGPIQLDVVTPWLVAAIEENF
                     GNGHHVEVGGTQIEHAESGGTAVRIRDIVVRDSEGAVVASAPKAEVRVSSLSLLRGHI
                     RAESLNLVGAEMAVRIEQDGGVTIFAGADKHPIATAAVPAAATRSGRNEPEKMAQAAA
                     AALRAAAPATVPSAEKLPPPRRASELFAGLLSRIDAIGESGLDGHDLRELGLKNGNLT
                     VNDERTGKRWTFRDISMSVERARSGGVEVTIGSDNAERPWGLTASIVPTANGYRKIDL
                     EARRVAASDLLLASRFGDGNAQIDMPLSASIAALVGPDGVPDSLSGRIVVEAGSIGGA
                     NEEDGRLAFDHAEFRLNWNAASRVLTMPFQILSGGNRITLMGQIEAPEEGAGTIWPFK
                     IGGGGTVFLTSLNGQGEPLILNHIAVTGRYDADRRRFVVDEGDLGNTDVGLAMSGNVD
                     FSGADLRLTAGLAATRMPVDTLKRVWPVFVAPKVRTWINEHLMSGSVDRLVIAVNAPY
                     ETLKESGPPIPDDGLTVDALATGCLIRPVEGLPALHDADLHVHIVGRDAVVSLGKATA
                     DLSPGRKLVLSSGVFEVPDTAPRAPPARVRFKLDGPLQAAVELLRMDRLRDVADAPFE
                     PSTMRGTISAQVTLGMPLKADLPPGSTNYAITLDATNFSADRM"
     gene            2368..2817
                     /locus_tag="VNY79_12360"
                     /pseudo
     CDS             2368..2817
                     /locus_tag="VNY79_12360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012044030.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0008379 - thioredoxin peroxidase activity
                     [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
     gene            3011..4273
                     /locus_tag="VNY79_12365"
     CDS             3011..4273
                     /locus_tag="VNY79_12365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007591578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HWX73287.1"
                     /translation="MPVAERGVPSRARSSTAPAAGAGYTITHAGRQIRFGPVVFWIAV
                     GSVVVMAGWSAATATYFAFRDDVLRGLIARQTEQQFAYEDRLAELRAQIDRTTSRQLL
                     DQEQFERKLEELARREATLESHATALGGIADSTPTGSIRGTSRGSDASGAKPSPAGDA
                     LAAPRRPDHGASIEPFRAPASGKRDAHVAVNARLDNIEASLDRVEKRQAVALREMEER
                     YQGKARKLRSVLAELGLKLGPPPPASGGPFVPVKLAGDAHDFERALSRINLARTQADQ
                     LSHALVSVPLRKPVSGEIDTTSNFGVRMDPFLHVPAMHTGIDFRGELGEPIHATAAGT
                     VTAAGWSGGYGKMVEIDHGNGLATRYGHLSQIDLYVGVKVRIGDIVGRLGSTGRSTGP
                     HLHYETRIDGEAVDPQKFLNAGAKLFGD"
     gene            4388..5014
                     /locus_tag="VNY79_12370"
     CDS             4388..5014
                     /locus_tag="VNY79_12370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010685824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase"
                     /protein_id="HWX73288.1"
                     /translation="MIRVHHLNNSRSQRVLWLLEELGVPYEITRYQRNKATMLAPDEM
                     KRVHPLGKSPVIEDEGRTFAETGLIVEYLVERYGPELAPSRDSDLHWRYRYWLHYAEG
                     SAMPPLLLKLIVDRLGILAFPARKFVNSQVKLHLDYLEAELGGGPWFLGERLSAADIM
                     LSFPLEAARVRGGLDRTRPNLFGFVERVHARPAYRRALEKGGPYRFAE"
     gene            complement(5108..6239)
                     /gene="prfB"
                     /locus_tag="VNY79_12375"
     CDS             complement(join(5108..6169,6171..6239))
                     /gene="prfB"
                     /locus_tag="VNY79_12375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502756.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HWX73289.1"
                     /translation="MRAEIDSIVAEIKQSVGLLRRHLDVDKARTRLAELNRQAEDPTL
                     WNDPQRASRVMQERTALEDQLAAIGRIEQDLDDQLTMIELGEAENDQKVVAEAEAALR
                     TLKAEVARRELEALLSGEADANNSYLEVHAGAGGTESQDWANMLLRMYVRWAEQHGFK
                     VDYIEETEGEEAGIKSATIEVKGRNAYGWLKTENGVHRLVRISPFDSNARRHTSFASV
                     TVYPVVDDRINIDVKEADVRVDTMRAGGAGGQHVNKTESAIRLTHIPTNIVVMCQNDR
                     SQHRNRAQAWQMLRAKLYELELKKREEKAAAEQAAKTDIGWGHQIRSYVLQPYQMVKD
                     LRTGVSTSNTGAVLDGEIDRFMEAALAQKAFGGEAEAVQDVE"
     gene            complement(6324..8786)
                     /locus_tag="VNY79_12380"
     CDS             complement(6324..8786)
                     /locus_tag="VNY79_12380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HWX73290.1"
                     /translation="MKILLRFLGFLFAAGTILFIVGVTAVAGMLWHFSKDLPDYSQLK
                     DYEPPVMTRVHAADGSLLAEYANERRLYLPIQAVPKLVINAFLAAEDKNFYEHGGLDF
                     YGIARATMLYVQNYGGSRRPQGASTITQQVAKNFLLTNELSVARKVKEALLALRIERT
                     YSKDKILELYLNQIYLGLGAYGVAAASLLYYDKSVHELSIAEAAYLAALPKGPNNYNP
                     FRRRDEAIARRNYVIDRMVEDGYVAADAGDKAKKEPLNIAVRPAGAHTFEAEYFAEEV
                     RRYISEKYGDKKLYEGGLSVRTTLDTKLQVLARKTMINGLVNFDEALGWRGPVTKIDT
                     GADWGVKLADVKSLSDIEPWHLAVVLEVNDQSARIGLQPARDPGGAVVKDREVGIVPL
                     DGVKWAKPANGPAKPIQRVTQVLATGDVVYVELSSKEKGEFRLRQVPEISGAMVVMDP
                     LTGRVLAMVGGFSYDQSQFNRATQALRQPGSSFKPLVYAAAIDNGYTPSSIVLDGPIE
                     VDTGAGGGAVWRPENYGGRFYGPSTLRFGLEQSRNVMTVRLAQDIGMPLISEYAKRFG
                     VYDDLPPYLSYALGAGETTVLRMVTAYSMFDNGGRRVKPTLVDRIQDRYGHTIYRHEE
                     RECRGCDGDKWRNQPEPSLVDRREQVIDPMTAYQITSMMEGVVQRGTATVVRDVGKPI
                     AGKTGTTNDEKDVWFIGYSPDIVCGVYMGYDKPRHIGRLATGGHVAAPIVRDFLKVAL
                     ADKPPIPFRVPPGIKLIRVDAKTGMRAGPGDPRAILEAFKPGTAPPDNYSVIGAETAS
                     GAPVPVSPDAGRAVRTGTGGLY"
     gene            complement(8964..10199)
                     /locus_tag="VNY79_12385"
     CDS             complement(8964..10199)
                     /locus_tag="VNY79_12385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HWX73291.1"
                     /translation="MASRALSCVLLGVLLASAASAEDRPSPPPFPDSLPIATDARLGG
                     DETQMRFVMDLSRKIDLHAFTLADPYRVVLDIPQVVFRLPPKTGEGGRGLITAFRFGL
                     VMQGGSRMVFDLAKPVRIDKAFVVDAADGAPARLVLDLAATDRENFLRRIALDNRVAR
                     SEAPPASLPEKSGGDPRPLVVLDPGHGGIDNGTKAASGELEKDIVLDFTQRLRERIDK
                     TSKYRVLMTRTDDTFVPLGERVRMARNAGAALFVSIHADALPRGEGDAQGASVYTVSE
                     TASDSEAARLAEKENRADVIAGVDLKAEPDDVADILIDLAQRETKSYSMQFAHRLVGE
                     LRAVTRVHKTPLKSAGLRVLRAPDVPSVLVELGYVSNREDLHSLLSGNWRNRTADSVA
                     QAIDGYFATRMAGARTGTK"
     gene            10873..13779
                     /locus_tag="VNY79_12390"
     CDS             10873..13779
                     /locus_tag="VNY79_12390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011926439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_process: GO:0006401 - RNA catabolic process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Rne/Rng family ribonuclease"
                     /protein_id="HWX73292.1"
                     /translation="MANKMLIDATHPEETRVVVLRGNRVEEFDFESAHRKQLRGNIYL
                     AKVTRVEPSLQAAFVDYGGNRHGFLAFSEIHPDYYQIPIADRQALIDEEERAQRDAED
                     EADRRSRRHHRGGRRRSAASRDDEVVRSELAEVPADDAIAADETAAIPAGDEGSATGP
                     GADAAAEIMEDAAGEPQAGEPPEPLADEASPRAVQPVEAPAVQTAEIATALFEASESD
                     GAVETDETAAAAGNEGNGARESVESDNGGEDGDEDEAAEEIVESVGGADALEEVPDRA
                     PRYRRQYKIQEVIKRRQVMLVQVVKEERGTKGAALTTYLSLAGRYSVLMPNTARGGGI
                     SRKITSAEDRSRLKEIAQELEVPEGMGVILRTAGAARTKTEIKRDFEYLLRLWETVRD
                     LTLKSTAPKLVYEEGSLVKRSIRDLYGKDIDEVVVAGSDACQEAKDFMRMLMPSHAKN
                     VKLYADTQPLLSRYGVESQLDGMFSPVVQLRSGGYVVLNQAEALVAIDVNSGRATREH
                     HIEDTALKTNLEAADEIARQLRLRDLAGLIVIDFIDMDEKRNNRAVERRLKECLKQDR
                     ARIQVGRISHFGLLEMSRQRIRTSVLESSTEKCPYCGGSGHVRSVSSLALQVLRALEE
                     QLMKGATHNLIARTRPDVALYVLNQKRAHLRSLEERFAITVTIAADETVTAPQAFVID
                     RGEQVHTLEAARARAELTEAQAAAPLEEEDDLEEAGALESDDAEAVAADDEAEHGEAG
                     GRRRSRRRRRGRNGGEAPLHAQPQGQEGAAEDFHAAPAEAEAEPAEDGELVEQPGELA
                     AEQRGELQRDGERRRRRRGRRGGRRNRLEREGEPAAPNDQHPHGREQHFSPMGESPPP
                     TVSHAEPEGVVGDFADFNAEPAVTAPQAVAEPMDAEGPAAPSSPPLQEQEPPRRRSTV
                     REPAPGAGSGVVTPEEPATPSPSPEQPVAAEPAESDDAARPRRTGWWSRRIAGG"
     gene            13835..15895
                     /locus_tag="VNY79_12395"
     CDS             13835..15895
                     /locus_tag="VNY79_12395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional aldolase/short-chain dehydrogenase"
                     /protein_id="HWX73293.1"
                     /translation="MKSGWVDREAALFVEDGAKSGIDRDLALRVYTTRLLGRDPKLVL
                     HGGGNTSLKTRLRDLFGEEAEVLHIKASGGDMATIEPAGLPAVRLAPLRRLRALDAIP
                     DEDLVAVERANMVEPAAPNPSVEIMLHAFLPHQFVDHTHATAVLSIIDQPNGEERCNE
                     VFAGQLAFVPYLMPGFGLAKKAIEVFERAKPSDGLILGKHGIVTFGDSAREAYERMIE
                     MVSAAEDFIARRRKSVTGVVPKAAHVAALTAVAPIVRGACSAKDEKIEGAWRRHVLDF
                     RGGDAVLNFLQNNDLARLSESGVITPDHTIRTKNWPLLLPAPQPGKLEAFARAAAEAA
                     ANFAGRYHRYFERHNKRVGGTKRALDPLPRVVLVAGLGLFGLGRSKRDAASAADIAEA
                     WVEGVVDAEAIGRFESISEAEMFDCEYWPLEQAKLGARKEPPLAGQVAAITGAAGAIG
                     AATAKAFAAAGAEVALLDVDLSAATENARGVGTTALPVRCDVTDATSVQAAFDQIAAA
                     FGGVDIAVSNAGAAWQGRIGEVDEDILRKSFELNFYGHQRVAQAAVRIMQAQGTGGCL
                     LFNVSKQAVNPGPNFGPYGIPKAAALALMRQYALDYGAEGIRANAVNADRIRSGLLTP
                     GMIASRAKARGLSEKDYMSGNLLGREVTADDVAQAFLHHALALKTTADVTTVDGGNIA
                     AAMR"
     gene            complement(16006..17217)
                     /gene="phaZ"
                     /locus_tag="VNY79_12400"
     CDS             complement(16006..17217)
                     /gene="phaZ"
                     /locus_tag="VNY79_12400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012319906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyhydroxyalkanoate depolymerase"
                     /protein_id="HWX73294.1"
                     /translation="MLYLAYQTQSDIMVPVRAWAAMAVAAGGSSLLAENSATRNLTAA
                     YELIARAGLSHTRPAFGIGSVTVGNSEVEVSEEAAAATPFGTLLHFKKHAGTAQPRVL
                     MVAPLSGHFATLLRATVRTMLPEHDVFITDWHNARDVPLTAGRFGVDEYVDHLIKFIE
                     VMGPGAHVLAVCQPCVAALAAAAAMAEAGNPAQPRSLTLMAGPIDTRVNSTRVNELAK
                     TRSIEWFERNLIASVPLRHPGAFRRVYPGFVQLAAFMSMNIDRHVKAHRELYENLANG
                     EAEKAAITKAFYDEYFAVLDLTAEFYLETVRLIFQEHALPRGRLDYRGRRVDPAAIRR
                     TMLFTVEGERDDICAVGQTVAAHDLCGNLRPYLKRHHMQAGVGHYGVFSGKRWENQIY
                     PLLKNVIMSSD"
     gene            17494..18150
                     /locus_tag="VNY79_12405"
     CDS             17494..18150
                     /locus_tag="VNY79_12405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013418610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione S-transferase family protein"
                     /protein_id="HWX73295.1"
                     /translation="MPKATLAIASKNYGSWSLRGWLLCKMAGLDFAEEQVASDDPSTR
                     AELLLLSPSFLVPCLTDNGLKIWDTLAIAEYLHEIKPKADLFPTDRGQRAHCRSICGE
                     MHSGFTNLRSALPMNLKGHYPGFKAWAGARGDIERITAIWRECLGRYEGPYLFGRDPC
                     AADAMYAPVCTRFLTYDIGLDPLSARYCRTIMALAPMQEWSAAAKLEPDELEELDMEF
                     "
     gene            complement(18152..18712)
                     /locus_tag="VNY79_12410"
     CDS             complement(18152..18712)
                     /locus_tag="VNY79_12410"
                     /inference="COORDINATES: protein motif:HMM:NF024698.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HWX73296.1"
                     /translation="MAAPTPPASQPAFATRRLLLTPRTSADNESCLEMDIDPEVVRFI
                     AVPWTDAAEHKAFIAARTRGPYPHGQGYWTVRQRSEPARFLGWILLTPLDAVGPDIEI
                     GWRFRRDAWGAGFATEAARAILDHAFGALGLAEVIADIHPENARSVRVAENIGLVLRS
                     RRFHHGEPHLRYAMTVAEYRAVGGQA"
     gene            19100..19222
                     /locus_tag="VNY79_12415"
     CDS             19100..19222
                     /locus_tag="VNY79_12415"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73297.1"
                     /translation="MPKTDNGVDYFFFLRFVVFRAVFFAAAFVFLFFAIAALLA"
     gene            complement(19797..21284)
                     /gene="gatB"
                     /locus_tag="VNY79_12420"
     CDS             complement(19797..21284)
                     /gene="gatB"
                     /locus_tag="VNY79_12420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016884 - carbon-nitrogen ligase activity,
                     with glutamine as amido-N-donor [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HWX73298.1"
                     /translation="MDAPAAKSKLIKGATGDWEVVIGMEVHAQVTSRAKLFSGASTEF
                     GGEPNAHVSLVDAAMPGMLPVINAECVRQAVRTGLGLKARINGRSVFDRKNYFYPDLP
                     QGYQISQYKSPIVGEGEVLVDMPDGHSVRVGIERLHLEQDAGKSLHDQHATMSLVDLN
                     RSGVALMEIVTKPDLRSAEEAKAFVGKLRTILRYLGTCDGDMEKGHLRADVNVSVRRP
                     GAALGTRCEIKNLNSIRFIGQAIEHEAWRQIGIVEDGGAVQQETRLFDPDKGETRSMR
                     DKEEAHDYRYFPDPDLLPLELAPSLVADLKAHLPELPDDKKERFMREHGLSVYDAGVL
                     VAERETAEYFEAVLADAGRGQPRDPKLAANWVINELAGRLNREGRNIATAPVSPAQLG
                     VILDLVADTTVSGKIAKDVFEIVWTEGGDPRAIVEARGLRQVTDLSAIEKLVDEIIAK
                     NPDKVEQVKAKPNVLGWFVGQVMKASGGKANPQAVNALVKKRMGI"
     gene            complement(21387..21635)
                     /locus_tag="VNY79_12425"
     CDS             complement(21387..21635)
                     /locus_tag="VNY79_12425"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73299.1"
                     /translation="MLAAVAGVALSFSGAAWAARMMKPAPGSCVADKRVIVASGMVCS
                     HHCNPTTQWCEQGWCLNGVWTPIVSCYEPVCSVKCGAH"
     gene            complement(21747..22817)
                     /gene="gtdA"
                     /locus_tag="VNY79_12430"
     CDS             complement(21747..22817)
                     /gene="gtdA"
                     /locus_tag="VNY79_12430"
                     /EC_number="1.13.11.4"
                     /inference="COORDINATES: protein motif:HMM:TIGR02272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0047922 - gentisate 1,2-dioxygenase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="gentisate 1,2-dioxygenase"
                     /protein_id="HWX73300.1"
                     /translation="MSVAAAKPPSSGEPDRKHNLAKMREAYYERVARHDMAPLWKVMS
                     TIITDEPVTRCAPVIWHYHDVKSLVMESGSLITAEEAKRRVLILENPGLRGESRATNT
                     LFAGIQMILPGEIAPAHRHVSSAIRFVLDGEGAYTAVEGEKAVMSPGDFVITANWAAH
                     DHGNPSDKPMLWLDVLDYPAVNFYEACFAEDFEEQKQETKRQDGDSLAFYGSGVLPDG
                     TAATNRSPVINYTYARTRPIIERMLLAGNIDPRHGARVRYANPITGGPVLPTMGAALA
                     MLPKGFHGEPCRSTDGTIFVCAEGAGSTQVDGQVLQWGPNDVFVVPPWKRYAHMAAKQ
                     SVLFSISDRPAQEALGIWREGT"
     gene            complement(22891..23466)
                     /locus_tag="VNY79_12435"
     CDS             complement(22891..23466)
                     /locus_tag="VNY79_12435"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018073559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008752 - FMN reductase (NAD(P)H) activity
                     [Evidence IEA];
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0052873 - FMN reductase (NADPH) activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HWX73301.1"
                     /translation="MADRTLNVMCICGSLRRGSYNRMVMNALPGLAPAGMNITEAPPF
                     SEFPLYNADVQEASGFPPPVQRLADAVRAADGVIFNSPEYNFSIPGGLKNAIDWVSRV
                     PNQPFAGKPVALQSAANGMLGGGRMQYDLRRAMIFLDAMTLNKPEIFIGNCSTRIDAK
                     TGEITDQQTVGFIRQQLAAFAKFIVQHGPRS"
     gene            complement(23563..24591)
                     /locus_tag="VNY79_12440"
     CDS             complement(23563..24591)
                     /locus_tag="VNY79_12440"
                     /inference="COORDINATES: protein motif:HMM:NF024772.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX73302.1"
                     /translation="MLRGKAAHRGRSRQVLRRLALVLALAVVAAPARAQEPVRIGMGF
                     GLAFLPIFLCEDLKLIEKHGKDAHLNLKATYQRFLGAGPLQDALASGAIDVAPFGVAP
                     LLAAWEKGKGSPRQILAVAGLSTLPLTLLTNRAGVRTLADFRPTDRIAVPTASSPQAY
                     LLRMQSEKTFGQFDRLQGQIVTLAHPDAVAALVAAAGPTTGYFASAPYTQVALEDGRI
                     HKVLTSADILGGKASFLVLGATRRYVTAQPKAAEAIAKAMDEAAGIIHDDPRRAAHIY
                     LTHEPSRTLDAAAVESILKEIKDEFGSAVHGVEAFAAFMGRHGDLKSPPQSWKDIVAP
                     ALVSSPST"
     gene            complement(24599..25477)
                     /locus_tag="VNY79_12445"
     CDS             complement(24599..25477)
                     /locus_tag="VNY79_12445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009465206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HWX73303.1"
                     /translation="MKIVAFEGQGGTRLGIVEGDQVIDLNAADGNLPADLGEILAKNN
                     GDTGPLADIAKRAPASARRPLADLTYRLPVGRPGKILCLGLNYLEHVKEGPQRDNIPK
                     FPTIFMRGLTSLVPHGQPIMRPQVTETLDYEAEMILVVGKRAKHLTAANALSCIAGYS
                     CGNEGSVREFQRKTTQWDMGKNFDRTGGFGPWLVTADELPPGAKGLKIESRLNGKVMQ
                     SDNTDNMMFPIVEMLVYITQGMTLEPGDVIFTGTPSGVGHARQPPVWMKNGDVCEIEI
                     AGIGVLRNPIADEKVG"
     gene            complement(25609..26514)
                     /locus_tag="VNY79_12450"
     CDS             complement(25609..26514)
                     /locus_tag="VNY79_12450"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73304.1"
                     /translation="MPICEADPWRLQYFARVETAANIPTEDSDAWQWYPRHRWIYDKL
                     AVALSQNLEAGPHGTPPPRFPVFSKPIVNLKGMGAGSRVLHSQADYDEHYAPGHFWMP
                     LLDGRHLSTDIAVVDGEPRWWRHVTGEVAGGGTFDYWTVQAASEPVIEAHCGAWVRAR
                     LPGYTGMLNLETIGGRIIEAHLRFADQWPDLYGVGWLGALVQLYEQGIWNFTDEDRRD
                     GYSVVLFGPTGVRYLHPPPALLEEVKQMAGVSSVQITFHEDRAPERHAMPPGGFRLAI
                     VNGFDLAGGLAARERLKEHFLTRPD"
     gene            complement(26596..27099)
                     /locus_tag="VNY79_12455"
     CDS             complement(26596..27099)
                     /locus_tag="VNY79_12455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6496 domain-containing protein"
                     /protein_id="HWX73305.1"
                     /translation="MPLKRTVEKARKDRREGKSPSTQAGEFVREEIDKIRRGEHGARS
                     TKQAIAIGLSEARRAGVKLPPPKRGQVTERTRKSAEYAYEAGLGKRKPRRRPRVSGAV
                     SRALKREPRNTVSHKALSRQAHTAAARRSAAQRSASARQAARTKGAVRRSAAGKKAAR
                     TRARRQG"
     gene            complement(27212..28183)
                     /gene="egtD"
                     /locus_tag="VNY79_12460"
     CDS             complement(27212..28183)
                     /gene="egtD"
                     /locus_tag="VNY79_12460"
                     /EC_number="2.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008961079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030745 - dimethylhistidine
                     N-methyltransferase activity [Evidence IEA];
                     GO_process: GO:0052699 - ergothioneine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L-histidine N(alpha)-methyltransferase"
                     /protein_id="HWX73306.1"
                     /translation="MTRAVQTARRAAPAATNDPFAADVLAGLAAKPKSLPPKYFYDLA
                     GSALFDRITGLPEYYPTRSEIGILQDNAPAIASLFPQNCALIEFGGGSSRKARILLGA
                     AATVEAYVPIDISGDFLQQDAAQLRRDFPHLAVHPVIADFTVASELPAAVASMPRVGF
                     FPGSTIGNFEPHEAAGFLRRAGHLLGVGAVLLVGVDLIKAPDILYRAYNDAAGVTAKF
                     NLNLLARINRELGADFDLAAFEHHAFYNAERRRIEMHLASTRRQKVRVCGVTGEFRAG
                     ETIHTENSYKYSVDSFQALAHGSGWSPLAVWSDGLFSVHLLRVADDR"
     gene            complement(28192..>28558)
                     /locus_tag="VNY79_12465"
     CDS             complement(28192..>28558)
                     /locus_tag="VNY79_12465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="SUMF1/EgtB/PvdO family nonheme iron enzyme"
                     /protein_id="HWX73307.1"
                     /translation="VDAAKPVCHVSYYEADAFARWSGKDLPTEGEWEVAAKSGVLNDA
                     FGVVWQWTRGAYTPYPGYKAPPGALGEYNGKFMVNQMVLRGSSLATPAGHSRSSYRNF
                     FYPSARWQFSGLRLAEYEH"
BASE COUNT         4857 a         9356 c         9471 g         4874 t
ORIGIN      
        1 catgcggtcg gcggaaaaat tcgtggcatc gagcgtgatc gcgtaattgg tcgagcccgg
       61 cggcagatcc gccttcagcg gcattcccag cgtcacctgc gcgcttatcg ttccgcgcat
      121 cgtcgagggc tcgaacggcg cgtcggccac atcgcgcaag cggtccatgc ggagcagctc
      181 gacggcggcc tgaagcggcc cgtcgagctt gaagcggacg cgcgccggcg gcgcgcgcgg
      241 cgctgtatcg ggcacctcga agacgccgga ggagagcacg agcttgcggc cgggcgacag
      301 atcggccgtc gccttgccca gcgagaccac ggcatcgcgc cccacgatgt gcacgtggag
      361 gtcggcgtcg tggagcgccg gcaggccttc gaccggccgg atcaggcagc cggtcgccag
      421 cgcgtcgacc gtaagcccgt cgtcggggat cggcggcccg ctttctttca gcgtctcgta
      481 cggagcgttc actgcgatca cgaggcggtc gacgctaccg ctcatgagat gctcgttgat
      541 ccacgtccgc accttcggtg cgacgaaaac cggccatacc cgtttcaacg tgtcgaccgg
      601 catgcgcgtg gcggcgaggc cggccgtgag gcgcaggtcg gcgccggaaa aatccacatt
      661 gccggacatg gcgaggccga cgtcggtatt gccgaggtcg ccctcgtcga cgacgaagcg
      721 gcgcctgtcc gcatcatagc gcccggtcac ggcgatgtgg ttgaggatca gcggctcgcc
      781 ctgcccgttg agggaggtga ggaagaccgt gccaccgccg ccgatcttga acggccagat
      841 ggtgccggcg ccttcctccg gcgcctcgat ctggcccatc agggtgatcc ggttgccgcc
      901 cgataggatc tggaatggca tggtcagtac gcggctggcg gcattccagt tgagcctgaa
      961 ttcggcgtgg tcgaacgcaa ggcgaccgtc ttcctcgttg gcgccgccga tcgagccggc
     1021 ctcgacgacg atgcggcctg acaacgagtc cggcacgccg tcgggcccga ccagggcggc
     1081 aatgctagcc gagagcggca tgtcgatctg cgcgtttcca tcaccgaagc gcgaggccaa
     1141 aaggagatcg ctcgccgcga cgcggcgcgc ctcgagatcg atcttgcggt agccgttggc
     1201 ggtcggcacg atcgacgccg tcaaccccca cggccgctcg gcattgtccg agccgatggt
     1261 cacctcgacg ccgccgctgc gcgcccgctc gacgctcatg ctgatgtcgc ggaacgtcca
     1321 acgcttgccg gtgcgctcgt cgttgacggt caggttcccg ttcttgaggc cgagctcgcg
     1381 cagatcatgg ccgtcgagcc cgctttcgcc gatggcatcg atgcgcgaca gcaggccggc
     1441 gaacagctcg cttgcgcgac gcggcggcgg cagcttttcc gcggacggga cggtagccgg
     1501 ggctgccgcg cgtagcgccg cagcggccgc ctgcgccatc ttttccggct cgttccggcc
     1561 ggaccgggtt gcggcggcgg gcaccgcggc ggtcgcgatc ggatgcttgt cggcgccggc
     1621 gaagatggtc acgccgccgt cttgttcgat gcgcacggcc atttcagccc cgaccaggtt
     1681 gagactttcg gcacggatat gaccgcgcag caggctcaag ctggagacgc gcacctcggc
     1741 tttcggcgcg ctggccacta ccgcgccttc ggagtcgcgc accacgatgt cgcggatgcg
     1801 caccgcggtg ccgccgctct cggcatgttc gatctgggtc ccgccgacct cgacgtgatg
     1861 accgttgccg aaattctcct cgatggccgc gacaagccac ggggtcacaa cgtcgagctg
     1921 gatgggcccg ctcgcgagcc gccaccacag gccggcggcc ccaagtgtca cgagcgcggc
     1981 gagcgcggca atgacgatgc cgccccggcg gatgagccgc tggtgccggg cgaagacacc
     2041 ccagtaaatg tgcatggatg cgcccttgcc agggcgtagg ccacggtcga aggagaaaag
     2101 cttgagcagc cggcgcgggt cggcgaaccg ctcccatagc ggagcgaccg cgctttgccg
     2161 gtgctgcatc gtcatggccc cctcgggcgt cccgtcgtcc gtggcgcctt cagaacgaca
     2221 tcaccgtcaa tcgacccccg gcgaacccca acctacctcg gaatgtcgac cttgcccgct
     2281 cgcacgtatt gtggcgaggt attgtcgcga actgagatgg ccctgcgaaa gcgtcgaaag
     2341 gaaggcatgc ccgacgagct tcagcccgga gcaaaggctc ctgccttcac cctgccgcgc
     2401 gacggcggcg gaaccgtttc gctcgcggac ttcgccggcc gcgcgctcgt gctttatttc
     2461 tatccgaagg cggacacgtc gggctgcacc aaggaagcga tcgacttctc gcggctgaaa
     2521 agcgcgtttg ccaaagcggg cgcggacatt ctcggcgtct ccgccgaccc ggtcccggca
     2581 caggacaagt tcaaggccaa gcacaagctg gcgattgcgc tcggttcgga tgaagcccat
     2641 cgcatgctcg aggcctatgg cgtttggcag cagaagtcga tgtacggccg caagttcatg
     2701 gggatcgtgc gggcgacttt cctgatcggc cccgaccagc gcattgcccg cgtgtggccg
     2761 aaagtgtccg tgaccggcca cgccgaggag gtcctcaccg ccctcaaggc actctgaggg
     2821 cccaacgcgg ctgcggtttt cgcggtcgtc gcccgcggtt gtggaagcat ttacccaagg
     2881 tcgcaaaatg ttggcgggaa ttttctgaaa attaaccata ctcggctcaa ttcccctgcc
     2941 ggcgtgggcc gatgggccgg cctggggagc gttgatgtcg gggtcgaggg cgtctcagtc
     3001 gcgacagaat atgccggttg ccgaacgcgg cgtgccgtca cgcgcgcgaa gcagcacggc
     3061 tcccgccgcc ggcgccggct acacgatcac ccacgcgggg cgacagatca ggttcggccc
     3121 ggtggtgttc tggattgccg tcgggtcggt cgttgtcatg gcgggctggt cggccgcgac
     3181 cgcgacctat ttcgcgttcc gcgacgacgt gctcagaggg ctcatcgcgc gccagaccga
     3241 gcagcaattc gcgtacgaag accgcctcgc cgagctgcgc gcgcagatcg atcgcaccac
     3301 cagccggcaa ttgctcgacc aggagcagtt cgagagaaag ctcgaggagc ttgcccgccg
     3361 cgaggccacg ctggaatcgc acgcgacggc gctgggcggc attgccgatt ccaccccgac
     3421 cggctcgatc cgcggcacct cgcgcggctc agacgcgtcc ggcgcaaagc cttcgccggc
     3481 cggtgacgcg ctcgcggcgc cccggcgccc cgaccacggc gcatcgatcg agcctttccg
     3541 cgcgccggcg agcggcaagc gcgacgcaca cgtcgccgtc aacgccaggc tcgacaacat
     3601 cgaggcttcg ctcgatcgcg tcgagaagcg ccaggccgtg gcactgcgcg agatggagga
     3661 gcgctaccaa ggcaaggcgc gcaagctgcg cagcgtcctc gccgagcttg gcctcaagct
     3721 tggcccgccg ccgccggcga gcggcggccc cttcgttccg gttaagctcg ctggcgacgc
     3781 tcacgacttc gagcgcgcgc tctcgcgcat caatctcgcg cgaacgcagg ccgatcagct
     3841 cagccatgcg ctcgtttcgg tgccattgcg caagccggtg agcggggaga tcgacaccac
     3901 ctcgaatttt ggcgtgcgta tggatccatt cctgcacgtg ccggccatgc atacgggcat
     3961 cgatttccgg ggcgagcttg gcgaaccgat ccatgcgacg gccgccggca cggtgaccgc
     4021 cgccggctgg agcggcggct acggcaagat ggtcgagatc gatcacggca acgggcttgc
     4081 gacccgttac ggccatctgt cgcagatcga cctttatgtc ggcgtcaagg tgcgcatagg
     4141 cgacatcgtc ggccgcctcg gctcgaccgg gcgctcaacc ggtccgcacc tgcattacga
     4201 gacgcgcatc gacggcgagg cggtcgatcc gcagaaattc ctcaatgccg gcgccaagct
     4261 gttcggcgac tgatagtctc tcggcgaata gcgaacggga atggcgatta acaatcgtca
     4321 ttccattgcc attcgccgct cctcattcgc tattcgccgc ctttggcctc tttcagggag
     4381 ggctcagatg atccgtgtcc accatttgaa caattcgcgc agccagcggg tcttgtggct
     4441 cctggaggag ttgggcgttc cctacgagat cacgcgctac caacgcaaca aggccaccat
     4501 gctggcgccg gatgaaatga agcgcgtgca tccgctcggc aaatcgccgg tcatcgagga
     4561 tgaggggagg acgttcgccg agaccggact gatcgtcgaa tatctggtcg agcgctatgg
     4621 acccgaactg gcgccatcgc gcgattccga tctccattgg cgctaccgct actggctgca
     4681 ttatgccgaa ggttcggcga tgccgccgct gctcctcaag ctgatcgtcg accggctcgg
     4741 aatactggcg tttccggccc gcaaattcgt gaactcccag gtaaagctcc acctcgacta
     4801 cctggaagcc gaattgggcg gcggaccgtg gttcctgggc gagcgcctct ccgccgccga
     4861 tatcatgctg agctttccgc tcgaagccgc gagggtccgc ggcgggctcg ataggacgcg
     4921 gccgaatctt ttcggctttg tcgagcgcgt ccacgctcgt ccggcctatc gacgcgcgct
     4981 cgaaaagggc ggtccctata gattcgcgga atgaaccgct gcccgcgtgg cgcgcggtga
     5041 acgcgggttc gcagcgtccg cgccgcgcga tgccgcatcg gtggcgccgc aaacgggctg
     5101 cggcaattta ctcgacgtcc tgcactgcct cggcctcgcc gccgaaagcc ttttgtgcca
     5161 gggccgcttc catgaagcgg tcgatttcgc catcgagaac ggctccggtg ttggaggtgg
     5221 aaacgccggt gcgcaggtct ttcaccatct gatagggctg cagcacgtag gagcggatct
     5281 ggtggcccca gccgatatcg gtcttggcgg cctgctcggc ggccgccttc tcttcgcgct
     5341 tcttgagttc cagctcgtag agcttggcgc gcagcatctg ccaggcctgc gcccggttgc
     5401 ggtgctgcga gcggtcgttc tggcacatga ccacgatgtt ggtcggaata tgggtgaggc
     5461 ggatcgccga ttccgtcttg ttgacgtgct ggccgccggc gccgccggcg cgcatcgtgt
     5521 caacacgcac gtccgcttcc ttgacgtcga tattgatgcg gtcgtcgacc accggataga
     5581 cggtcacgct cgcgaatgag gtgtggcggc gggcattgga atcgaacggc gagatgcgca
     5641 ccagccggtg cacgccgttc tcggtcttga gccagccata ggcgttgcgg cccttgacct
     5701 cgatggtggc cgacttgatg cccgcttcct cgccctcggt ctcctcgatg tagtcgacct
     5761 tgaagccgtg ctgctcggcc cagcgcacat acatgcgcaa cagcatgttg gcccaatcct
     5821 ggctctcggt gccaccggcg ccggcatgca cttcgaggta ggaattgttg gcgtcggcct
     5881 cgcctgaaag cagcgcctcg agctcgcggc gcgccacctc ggccttgagc gtgcgcaacg
     5941 ccgcctccgc ctcggcgacg accttctggt cgttctccgc ctcgccgagc tcgatcatcg
     6001 tgagctggtc gtcaaggtcc tgctcgatcc ggccgatcgc agcgagctgg tcctcgagcg
     6061 cggtgcgctc ctgcatcacc cggctcgcgc gctgcgggtc gttccagaga gtggggtctt
     6121 cggcctgccg gttcagctcg gcaagccgtg tccgcgcctt gtcgacgtca aagatgcctc
     6181 ctcagcagcc cgaccgactg cttgatctcg gcgacaatgg aatcgatctc ggcgcgcatg
     6241 ggttaccgat ttcagaggtc agagttcaaa tgtcagcaat cagataagct cggaaatcaa
     6301 acggtacaat cgtcgtgccg gcgtcaatac aagccgccgg tgccggtgcg caccgcacgc
     6361 ccggcgtcgg gcgagaccgg caccggggcg ccgctcgcgg tttccgcccc gatcaccgag
     6421 tagttgtcgg ggggcgcagt gccgggcttg aacgcttcga ggatcgcgcg cgggtcgccc
     6481 gggccggcgc gcatgccggt cttcgcgtcg acgcggatga gcttgatacc cggcggcacg
     6541 cggaatggaa tgggcggctt gtccgcgagc gcgactttca ggaagtcgcg cacgatcggc
     6601 gccgcgacgt gaccgccggt ggcgagccgc ccgatatggc gcggtttgtc gtaccccatg
     6661 tagacgccgc agacgatgtc cggcgaatag ccgataaacc acacgtcctt ctcgtcgttg
     6721 gtggtgccgg tcttgccggc aatcggcttg ccgacgtcgc ggaccacggt cgccgtgccg
     6781 cgctgaacga cgccctccat catcgaggtg atctggtagg cggtcatcgg gtcgatcacc
     6841 tgctcgcggc ggtcgaccag cgacggttcg ggctggttgc gccatttgtc gccgtcgcag
     6901 ccgcggcatt cgcgctcctc gtggcggtag atggtatggc cgtagcggtc ctgaatgcgg
     6961 tcgaccagcg tcggcttcac gcgccgcccg ccgttgtcga acatcgaata ggcggtgacc
     7021 atgcgcagca ccgtggtctc gccggcgccg agcgcgtagg agaggtaggg cggcagatcg
     7081 tcgtagacgc cgaaacgctt ggcatattcc gaaatcagcg gcatgccgat gtcctgcgcc
     7141 agccggaccg tcatcacgtt gcgtgactgc tcaaggccga agcgcagcgt ggagggccca
     7201 taaaacctcc cgccgtagtt ttccggccgc cacaccgccc ccccgccggc gccggtatcc
     7261 acctcgatcg gcccgtcgag gacgatgctc gacggcgtgt aaccgttgtc aatggcggcg
     7321 gcgtagacca gcggcttgaa cgatgagccg ggctgccgca gcgcctgggt ggcgcggttg
     7381 aactggctct ggtcgtagga gaaaccgccc accatcgcca ggacgcggcc ggtcagcgga
     7441 tccatcacca ccatggcacc ggaaatctcc ggtacttggc gcaaccggaa ttcgcccttt
     7501 tccttcgacg acagctcgac atagacgacg tccccggtcg cgagaacctg ggtaacgcgc
     7561 tggatcggct tcgccggccc attcgccggc ttcgcccatt tgacgccgtc gagcggcacg
     7621 atgccgactt cgcggtcttt gaccacggcg ccaccgggat cgcgcgccgg ctgcaggccg
     7681 atgcgcgccg actgatcgtt cacctcaagc accaccgcta ggtgccaagg ctcgatgtcc
     7741 gacagcgact tcacgtcggc gagcttgacc ccccaatcgg cgccggtgtc gatcttggtg
     7801 accgggccgc gccagcccag cgcctcgtcg aaattgacga gcccgttgat catggtcttg
     7861 cgcgccagca cctgcagctt ggtgtccagc gtggtgcgca ccgacagccc gccttcgtag
     7921 agcttcttgt cgccgtactt ctcggagatg tagcggcgca cctcctcggc gaagtattcg
     7981 gcctcgaagg tgtgggcgcc ggccggccgc accgcgatgt tgagcggctc cttcttcgcc
     8041 ttgtcgccgg cgtcggcggc aacgtagccg tcctcgacca ttcgatcgat gacgtaattg
     8101 cgccgcgcga tggcctcgtc gcggcgccgg aacggattgt agttgttcgg acccttgggc
     8161 agggcggcga gataagccgc ttcggcgatc gaaagctcgt gaacggattt gtcgtagtac
     8221 agaagcgagg ccgcggcgac cccgtaggcg ccgagcccga gatagatctg gttgagatag
     8281 agttcgagga tcttgtcctt cgaataggtg cgctcgatgc gcagcgcgag cagcgcctcc
     8341 ttgaccttgc gcgcgaccga cagttcgttg gtcaatagga agttcttcgc gacctgctgg
     8401 gtgatcgtcg aggcgccttg cggacggcgg ctaccgccgt agttctggac gtagagcatg
     8461 gtcgcgcggg caatgccgta gaagtcgagc ccgccgtgct cgtagaagtt cttgtcctcg
     8521 gccgcgagga acgcgttgat gacgagcttg gggactgcct ggatcgggag atagaggcgg
     8581 cgttcgttgg catattccgc gagcagggaa ccgtcggccg cgtgcacgcg ggtcatcacc
     8641 ggcggctcat aatcctttag ctgcgaatag tccggtaaat ccttggagaa atgccacaac
     8701 atgccggcga cggcggtcac gccgacaatg aacaggatcg tgcccgccgc gaacagaaag
     8761 ccgagaaacc gcaacaggat tttcattgcg aacgtctcgc cccatccgaa ccggcgcatg
     8821 cgccggatcg gcccgggctc ggtgacgcgg cgaacaccca atctgccgga accggaccga
     8881 gcccgcccaa gccccactta tacagcgtgt gtggtcgctc tgcttcttgt tcaaactgag
     8941 gccgctggag cattcggggc ctcttacttt gtaccggtgc gggcgccggc catgcgggtc
     9001 gcaaaatagc catcgatcgc ctgcgcgacc gaatccgctg tccggttgcg ccaatttccg
     9061 gaaaggagcg agtgcaggtc ctcgcggttg gacacgtagc cgagttcgac caggaccgaa
     9121 ggcacgtccg gcgcccgcaa gacccgcaag cccgccgact tcagcggcgt cttgtggacg
     9181 cgcgtcaccg ccctcagttc gccgaccagc cggtgggcga attgcatcga atagctcttg
     9241 gtctcgcgct gcgcgagatc gatcaggata tcggcgacgt cgtccggctc ggccttgaga
     9301 tcgacgccgg cgatgacgtc ggcccggttc tccttctctg caagccgcgc cgcttccgaa
     9361 tccgaggcgg tttcggagac cgtatagacg ctcgcgcctt gcgcatcccc ctccccgcgc
     9421 ggcagcgcgt cggcatggat ggaaacgaac agcgccgcgc cggcgttccg cgccatgcgc
     9481 acgcgttcgc cgagcggcac aaaggtgtcg tcggtccgcg tcatgagcac acggtatttg
     9541 ctggttttgt cgatgcgttc gcgcaggcgc tgagtgaaat cgaggacgat gtccttctcc
     9601 agttcgccgc ttgcggcctt ggtgccgttg tcgatgccgc catggccggg atcgaggacg
     9661 acgagcgggc gcggatcgcc gccgctcttt tccggcaggc tcgccggcgg cgcctcgctg
     9721 cgagcgaccc ggttgtcgag ggcgatccgg cgcaagaagt tctcgcgatc ggtcgcggca
     9781 agatcgagca ccaggcgagc gggcgcaccg tctgcggcat cgacgacgaa ggccttgtcg
     9841 atgcgcaccg gcttggcgag gtcgaagacc atccgcgagc cgccctgcat caccaggccg
     9901 aagcgaaagg cggtaatcag gccgcgcccg ccctcgccgg tcttcggcgg cagccggaac
     9961 accacttgcg ggatgtcgag gacgacccgg tagggatcgg caagcgtgaa ggcgtgcagg
    10021 tcgatcttgc ggctgagatc catgacaaaa cgcatctgcg tctcgtcgcc gccgaggcgc
    10081 gcgtcagtcg caattggaag cgaatcgggg aacggcggcg ggcttggccg gtcctcagcg
    10141 gaagcggccg aagcgaggag gacaccaaga agcacgcagc tcagcgcccg cgaagccatc
    10201 ggttctcccc gcccatcgcg ttcctcatac tccattaggc gggcgtggtt aaccgaaact
    10261 taaatgacta gatatggggc tggggagatt cgtcccgttg ctcgcgcagt gaccaatcgg
    10321 cgcaaatccc tgggcaaatc cgcggagcga cttgccaatt ccccgccgcc ggccttaaga
    10381 aggatgtgct gacaggttcc ggttctgtcc ccgtcagggc atccggcgca ttcgccgcaa
    10441 tgctcccgaa gccataaggg gtggtggacg ccgcctgcga ccgttccggc gctcatgatg
    10501 acgcgccgag ggatgcggcg cgcgcggcaa agccgatccc tcaaggagga ggcagccgga
    10561 atctggcgcg ccgccggcag cgatacgcgc ttccggagcg agccgacagc agaagcaacc
    10621 gcgtgatccc ccgcggcggc gccgagccgt cccaccacgg ttggagttca tgttcgaggc
    10681 ggaagtcgag tttcgatcga agcgatgcgg aagcgcccat gcggcgctcg cccgctcgcg
    10741 gataggtctc ggttgccgcg ctcggagttc tcgatccgtt tccctcaccg acaattgggc
    10801 ggctcgccgt cctccgtcgc catctgcggc gcggggcgag cggcgccaag ccggccctca
    10861 tgagaattgc caatggccaa caaaatgctc atcgacgcga cccatccgga ggaaacccgg
    10921 gtggtcgtcc tgcgcggtaa ccgcgtcgag gaattcgact ttgaatccgc gcaccgcaaa
    10981 caactgaggg gcaacatcta tctggcgaag gtgacgcgcg tcgagccgtc gctgcaagcc
    11041 gcctttgtcg attatggcgg caatcgccac gggtttctcg ccttcagcga aatccacccc
    11101 gactattacc agatcccgat cgccgaccgg caggcgctga tcgacgaaga ggagcgcgcc
    11161 cagcgcgacg ccgaagacga ggccgaccgg cgctcccgcc ggcaccatcg cggcggccgc
    11221 aggcgttccg cggcaagtcg cgacgacgag gtcgtgcgca gcgaattggc cgaagtcccg
    11281 gccgacgacg cgatcgcagc ggacgagacg gcggcgatac ccgccggcga cgagggctcc
    11341 gcaacggggc cgggagccga cgctgcggcc gagatcatgg aggacgccgc cggagagccg
    11401 caagccgggg agccgccgga gcctcttgcc gacgaagctt cgccacgcgc ggtgcaaccg
    11461 gtcgaggcac cagcagtgca gacggcggag atcgcgaccg cgcttttcga ggcaagcgaa
    11521 tccgatggcg ccgtggagac cgacgaaacc gcagccgcag ccggcaacga aggcaacgga
    11581 gcgcgcgaat ccgtcgagag cgacaatggc ggggaagacg gcgacgagga tgaggcggcc
    11641 gaagagatcg tcgaatcggt cggcggcgct gacgcgctcg aggaggtgcc cgaccgggcg
    11701 ccgcgctacc gccgccaata caagatccag gaagtgatca agcgccggca ggtgatgctg
    11761 gtgcaggtgg tcaaggaaga gcgcggcacc aagggcgcgg cgctgaccac ttatctgtcg
    11821 ctcgccggac gctattcggt gctgatgccc aacaccgcgc gcggcggcgg tatcagccgc
    11881 aagatcacga gcgcggaaga tcgctcgcgg ctcaaggaga tcgcgcagga gctcgaagtt
    11941 cccgaaggca tgggcgtgat cctgcgcacc gccggcgccg cccgcaccaa gaccgagatc
    12001 aaacgcgatt tcgaatacct gctgcggctg tgggagaccg tgcgcgatct gacacttaaa
    12061 tccacggcgc ccaagctcgt ctacgaggag ggatcgctgg tcaagcgctc gatccgcgac
    12121 ctctacggca aggacatcga cgaggttgtc gttgccggtt cggacgcctg ccaggaggcg
    12181 aaggacttca tgcgcatgct catgccgagc catgcgaaga acgtgaagct ctacgccgac
    12241 acgcagccgc tcttgtcgcg ctacggcgtc gaaagccagc tcgacggcat gttctcgccg
    12301 gtcgtgcaac ttcgctcggg cggctacgtc gtgctcaatc aggccgaggc gctggtcgcg
    12361 atcgacgtca attccggccg tgcgacgcgc gagcatcata tcgaggacac tgcactcaag
    12421 accaacctcg aagcggccga cgagatcgcg cgccagctcc ggctccgcga cctcgccggc
    12481 ctgatcgtca tcgacttcat cgacatggat gagaagcgta acaatcgcgc ggtcgaacgg
    12541 cggctgaagg aatgcctcaa gcaggatcgc gcccgcatcc aggtcggccg catctcgcat
    12601 ttcggcctgt tggagatgtc gcgccagcgc atccgcacca gcgtgctcga aagctcgacg
    12661 gagaagtgcc cttactgcgg cggcagcggc catgtgcgct cggtgtcttc gctggctctg
    12721 caggtgctgc gcgcgctcga agagcagctc atgaagggcg ccacgcacaa tctcatcgcg
    12781 cgcacgcgcc cggacgtggc cctctatgtc ctcaatcaga agcgggcgca tctgcgctcg
    12841 ctggaagagc ggtttgccat caccgtcacc attgccgccg atgagacggt gacggcgccg
    12901 caggccttcg tcatcgatcg cggcgagcag gtccatacgc tcgaggcggc gcgggcgcgc
    12961 gccgagctga ccgaggcgca agccgctgcg ccgctcgagg aggaagacga cctggaagaa
    13021 gccggcgcgc tggaaagcga tgacgccgaa gcggttgcgg cggacgacga agccgagcac
    13081 ggcgaagccg ggggccgccg ccggagccgc cgccgccggc gcggtcgcaa cggcggagaa
    13141 gccccactac atgcgcagcc tcaaggccag gaaggcgcgg ccgaggactt tcacgccgcc
    13201 cctgccgagg ccgaggccga gccggccgag gacggcgaac tcgtcgagca accaggcgaa
    13261 ttggccgcag agcaacgcgg cgagctccag cgcgacggcg agcggcggcg acgacgccgc
    13321 ggccgccgcg gcgggcgccg caaccgactc gagcgcgagg gcgagccggc agcgcccaac
    13381 gatcagcatc cgcacgggcg ggagcagcat ttttcgccta tgggagaatc acctccgcct
    13441 actgtgtcgc acgctgaacc cgaaggggtt gttggggact tcgcggactt caatgccgag
    13501 ccggcagtga ccgctccgca agcggttgct gaaccgatgg atgcggaagg gccagcggcc
    13561 ccctcgtcgc cgccgctcca agaacaggag ccgccgcgcc ggcgttcgac cgtgcgcgag
    13621 ccggcccctg gcgccggcag cggtgtcgtg acacctgaag agccggcaac gccgtccccc
    13681 tctccggagc agccggtcgc ggccgaaccg gccgagagcg acgacgccgc ccgcccgcgg
    13741 cggaccggat ggtggtcgcg ccggatcgcc ggtggttgat ggcggcgccg accctcgcgg
    13801 cgggaacccg ccctgaggcg gcgcggagcg cgcgatgaaa agcggctggg ttgatcgcga
    13861 ggccgccctc ttcgtcgagg acggcgcaaa atccggcatc gaccgcgacc tggcgttgcg
    13921 tgtctatacg acccggctgc tcggccgcga tcccaagctg gtgctgcacg ggggcggcaa
    13981 cacgtcgctc aagacccgcc tgcgcgatct cttcggcgag gaagcggagg ttttgcacat
    14041 aaaggcctcc ggcggggata tggcgaccat cgaacccgca ggtctcccgg ccgtgcggct
    14101 tgcgccgctg cgaaggctgc gtgcgctcga cgcgatcccg gacgaggatc tggttgccgt
    14161 cgagcgcgcc aatatggtcg agccggccgc gcccaatccc tcggtcgaga tcatgctgca
    14221 cgcgttcctg ccgcaccaat tcgtcgatca cacccatgcg acggcggtac tcagcatcat
    14281 cgaccagccg aacggcgaag agcgatgcaa cgaggtcttt gccggccagc ttgcattcgt
    14341 gccctacctc atgccgggct ttggcctcgc caagaaggcc atcgaggttt tcgaacgcgc
    14401 gaaaccgagc gacggcctca ttctcggcaa gcacggcatt gtcacgttcg gcgacagcgc
    14461 gcgcgaggcc tacgagcgca tgatcgagat ggtgtcggcc gccgaagact ttatcgcgcg
    14521 gcgtcgcaag agcgtcacgg gcgtcgtgcc aaaggccgcg cacgttgccg ccctcaccgc
    14581 ggtagcgccg atcgtgcgcg gtgcgtgcag tgcgaaggat gagaaaatcg aaggcgcctg
    14641 gcggcggcac gtgctcgatt ttcgcggtgg cgacgccgtg ttgaactttt tgcagaacaa
    14701 tgatttggcc cggctgagtg aaagcggcgt gataacgccc gaccacacca tccgcacgaa
    14761 gaactggccg cttctcctgc ccgcgcctca gcccggcaag ctcgaagcct ttgcgcgcgc
    14821 cgccgcggaa gcggcggcga actttgccgg gcgctatcac cgctatttcg aacgccacaa
    14881 caagcgcgtc ggcggtacca agcgcgcgct cgatccgctg ccgcgcgtgg tgctggtggc
    14941 cggcctcggc ctgttcggcc tcggccgttc gaagcgcgat gccgcaagcg cagccgacat
    15001 tgccgaagca tgggtcgaag gcgtggtcga cgccgaagcc atcggccggt tcgagtcgat
    15061 ctccgaagcg gaaatgttcg attgcgagta ctggccgctg gaacaggcaa agctcggcgc
    15121 gcggaaggag ccgccgctcg ccggtcaggt cgccgccata accggagcgg ccggcgcgat
    15181 cggcgcggca acggcgaaag cctttgctgc cgcgggtgcc gaagtcgccc tactcgatgt
    15241 cgatctctcg gcggcgaccg aaaacgcgcg tggcgtcggc accacggcgc tgccggtgcg
    15301 ctgcgacgtg accgatgcaa cttccgtgca ggcggctttc gatcaaatcg ccgccgcctt
    15361 cggcggcgtc gatatcgcgg tgtcgaacgc cggcgccgcc tggcagggcc gcatcggcga
    15421 agtcgacgaa gacatcttgc gcaagagctt cgaactcaat ttctacggcc accagcgcgt
    15481 ggcgcaggca gcggtcagga tcatgcaggc gcaagggacc ggcggatgcc tgctctttaa
    15541 tgtgtccaag caggcggtga atcccggccc gaatttcggg ccatacggca taccgaaggc
    15601 ggcggcgctg gcgctgatgc gccaatacgc gctcgattac ggggccgaag gcatccgcgc
    15661 caacgccgtc aacgccgacc gcatccgctc aggcctgctg acgcctggca tgatcgcctc
    15721 gcgcgccaaa gcgcgcgggc tgagcgagaa ggattatatg agtggcaacc tgctcggacg
    15781 tgaagtgacg gccgacgacg tcgcccaggc cttcttgcac cacgcgctgg cgctcaagac
    15841 gaccgcggac gtcaccaccg tcgacggcgg caacatcgcg gcggcgatgc gctgaagcct
    15901 ggcctgggtg tcccctcagg cccgcgtgcg ctcaaccgcg gctgcacggc acgtgcgggc
    15961 aacgacgggc ttgcgacggc gcttcgaact acgaacgctt cgagatcagt cgctcgacat
    16021 aataacgttc ttcagtagcg gatagatctg gttctcccag cgcttgccgg aaaacacgcc
    16081 gtaatggccg acgcctgcct gcatgtggtg gcgtttgaga tagggacgca gattgccgca
    16141 gaggtcatgc gcggcgacgg tctggccgac ggcgcaaatg tcgtcgcgct cgccctcgac
    16201 ggtgaacagc atggtgcgcc ggatcgcagc cggatcgacg cgccggccgc gatagtcgag
    16261 ccgaccgcgc ggaagcgcat gctcctggaa aatgagccgc acggtctcga gatagaactc
    16321 tgcggtgagg tcgagtacgg caaagtattc gtcatagaag gccttggtga tcgccgcctt
    16381 ttcagcctcg ccattggcca ggttttcgta cagttcgcga tgcgccttca cgtgccggtc
    16441 gatgttcatg ctcatgaagg cggcgagctg cacgaagccc ggatagaccc ggcgaaaagc
    16501 gcccggatgg cgcagcggca ccgacgcgat caggtttcgc tcgaaccact cgatcgagcg
    16561 cgtcttggca agctcgttga cccgggtcga gttgacgcgg gtatcgatcg gtccggccat
    16621 cagcgtgagg ctgcgtggct gcgccgggtt gcccgcctcc gccatcgccg ccgcggccgc
    16681 aagcgcggcg acgcagggct ggcagaccgc aagcacgtgg gcgccgggtc ccatgacttc
    16741 gatgaacttg atcagatgat cgacatattc gtcgacgcca aaacggcccg ccgtcagcgg
    16801 cacgtcgcga gcgttgtgcc agtcggtgat gaagacgtcg tgctccggca gcatcgtgcg
    16861 aacggtcgcg cgcaacagcg tggcgaaatg gcccgacagc ggcgccacca tgagcacccg
    16921 cggctgcgcc gtgccggcgt gcttcttgaa atggaggagc gtaccgaacg gcgtcgctgc
    16981 ggccgcctcc tcgctgactt ccacctcgct gttgccgacg gtgaccgagc cgatgccgaa
    17041 ggccgggcgg gtgtggctga ggccggcgcg cgcgatcaac tcatacgcgg cggtcagatt
    17101 gcgtgtggcc gaattctcgg cgagcaacga cgagccgccg gcggcgaccg ccatggccgc
    17161 ccaagcgcgc accggcacca tgatgtcgga ttgcgtctga taggcgagat acaacatccc
    17221 ctaagcccgc aagatggcga gccgcccggc acggcaacac ccccgatccc agtctcaggc
    17281 tagtgcattt tttgttgcac tgcgacaaaa ttattcagac aaaaattatt cagacacgga
    17341 gattggcgaa tatcttgcat gtgcagcgcc cgtaaggaca gcgagacaag aggcgtgctc
    17401 ggcggacctt ttcgccttgc cgcgctcatg cgctttgcca gggccgtgtt gtaagccatt
    17461 gcgaaggcgt cagttcgtta ggggacctgc ggtatgccga aagccacact cgccatcgcc
    17521 agcaagaact acgggtcgtg gtcgctgcga ggctggttgc tgtgcaaaat ggcgggtctc
    17581 gattttgccg aggagcaagt tgcctccgac gatccttcca cgcgcgcgga attgcttctc
    17641 ctttcgccgt cattcctcgt gccctgcctg accgacaacg ggctgaagat ctgggatacg
    17701 ctggcaatcg ccgagtatct gcacgagatc aaacccaaag ccgacctctt tcccaccgac
    17761 cgcggtcagc gcgcccactg ccgttcgatc tgcggcgaga tgcactccgg cttcaccaac
    17821 ctgcgctcgg ccctgcccat gaaccttaaa gggcactatc ccgggttcaa ggcctgggcc
    17881 ggcgcgcgcg gcgatatcga gcgtatcacc gcgatctggc gcgagtgtct cggccgctac
    17941 gagggaccct atctgtttgg aagagacccg tgcgccgccg acgccatgta tgcgccggta
    18001 tgcacgcgct ttctcaccta cgatatcggc ctcgatccgc tctcggcgcg gtactgccgc
    18061 accatcatgg cgcttgcacc catgcaggaa tggagtgccg ccgccaagct cgagcccgac
    18121 gagctcgaag agctggacat ggagttttga cttacgcctg accgccgacg gcgcgatact
    18181 ccgccacggt catcgcgtag cgcaaatgcg gctcgccatg atgaaagcgg cggctgcgaa
    18241 gaacgagccc gatgttttca gcaacccgga ccgatctcgc attctcggga tggatgtccg
    18301 cgatcacctc ggcgagcccg agggcgccga aggcatggtc gaggatggcg cgggctgcct
    18361 cggtcgcaaa accggcgccc cacgcgtcgc ggcgaaaccg ccagccgatc tcgatgtccg
    18421 gccccaccgc gtcgagcggc gtcaggagaa tccagccgag gaaacgtgcc ggctcggatc
    18481 tttgccgcac cgtccaataa ccctggccgt gaggatacgg gccgcgcgtg cgtgccgcga
    18541 tgaatgcctt gtgctccgct gcgtcggtcc acggcaccgc gatgaagcga acgacctccg
    18601 gatcgatgtc catctcgagg cagctctcgt tgtcggcgct cgttcgcggc gtaaggagga
    18661 gccgccgcgt tgcaaacgcc ggctgcgatg cgggaggagt tggcgctgcc atgggcttcc
    18721 gccgtgttcg cacgccttgc gccggaaggg ccgcaccatc gagtgggaac agccgtcgag
    18781 gtttcccgct cgttcggcgc gaacaaaaaa gaaggcgccg agcgttggcg cggcgccgtc
    18841 aagttctgca gagaggaaac ggctgacaca ccgagtgcgt cggcaagatg cccgagggat
    18901 cgaaacggcc ggctcttaac cacgggcgag ccggatgatc tactcctctt cttaaccacc
    18961 gcgcgctgcg cgagcgatgg cgcaagcctc cgtctcgccg acgccctccg tcgtccacct
    19021 gagccggcgc gtctcggaca atctttgatc agtcctcgac agcggccggc ccgtgtgacg
    19081 cgatcctcga caccagcggg tgccgaagac cgataacggc gtcgactact tcttcttctt
    19141 gcgcttcgtg gttttccgcg ccgtcttctt cgccgctgcc ttcgtctttc tcttcttcgc
    19201 cattgctgcc ctcctagctt gagtggatgg cgacatcgct acagtgcagt cgcgaatcga
    19261 tctgcactac catccgatta ctacagcgaa aaaaaaataa cagtgactcc acttaatttt
    19321 gtgtgtaagt gccgcgcccc gctcgccgcc cgttgcgcgt cgcgatcgtc ggcagaacgg
    19381 cgctgcgaaa gacttctgcg ccgacgcggc tgcacagcaa aaatcagcga ccgcgcagaa
    19441 gtgcccatgg aatgcgcatt tcttcgacgt atcatgttgc gatgccgcgt cgagaacgcg
    19501 cgcatcgcta cgcacccgcg cacgcgattt cgggcgcgac ggcgccgccg cagcgaaatt
    19561 caccacgcta aaaaaatttt gccgcggacg ccttccgcgg gcctgttgac ggctcgcgcg
    19621 aggcgcaaaa cgcgcaaatc gacgccaaac cgattcgcgc ggcgcggcgt tcggggaggc
    19681 gcgcggacgt ggcgcggcgt cacgccggcg agattttcgc ccgcgggacc gatcgcgagg
    19741 agcgcagtcg gaccatgttc gtgacgccag cgccggcatc agcgaagctt gcgccgtcaa
    19801 attcccatcc gcttcttgac gagcgcgttg accgcttgcg ggttggcttt gccgcccgat
    19861 gccttcatga cctgcccgac aaaccagccg agcacgttcg gcttcgcctt cacctgttcc
    19921 accttgtcgg gatttttggc gatgatctcg tcgacgagct tctcgatcgc ggacagatcg
    19981 gtcacctgcc gcaggccgcg cgcttcgacg atggcgcgcg gatcgccgcc ctcggtccag
    20041 acgatctcga aaacgtcctt ggcgatcttg ccggagaccg tggtgtcggc gacgagatcg
    20101 aggatgacgc cgagttgcgc cggtgagact ggcgcggtgg cgatgttccg gccctcgcgg
    20161 ttgagccgcc cggcgagttc gttgatcacc caattggcgg cgagcttggg atcgcgaggc
    20221 tgcccgcggc ccgcgtctgc aaggaccgcc tcgaaatatt ccgcggtctc gcgctcggcg
    20281 acaagcacgc cggcgtcgta gacggaaagt ccgtgctcgc gcatgaagcg ttccttcttg
    20341 tcgtccggca gttcgggcag atgcgccttc aggtccgcca ctagggacgg ggcaagctcg
    20401 agcggcagca ggtccggatc gggaaagtag cggtagtcgt gcgcctcctc tttgtcgcgc
    20461 atcgaccggg tttcgccctt gtccggatcg aacagccgcg tctcctgctg gacggcgccg
    20521 ccgtcctcga cgattccgat ctgccgccac gcctcgtgct cgatcgcctg gccgatgaag
    20581 cggatcgaat tgaggttctt gatttcgcag cgcgtgccca gcgcggcgcc tggccggcgc
    20641 accgatacgt tcacgtcggc gcgcaaatga cccttctcca tgtcgccgtc gcaggtgccg
    20701 aggtagcgca ggatggtgcg cagcttgccg acaaaggcct ttgcctcctc ggcggagcgc
    20761 agatccggtt tggtcacgat ctccatcagc gccacgccgg aacgattgag gtcgaccagg
    20821 gacatcgtgg cgtgctgatc gtgcagcgat ttgccggcat cctgctcgag atgcagccgc
    20881 tcgatcccga cgcgcaccga atgcccgtcc ggcatgtcga cgaggacctc gccctcgccg
    20941 acgatcggcg atttgtactg gctgatctga taaccctgcg gcaggtcggg atagaaatag
    21001 ttcttgcggt cgaaaaccga ccggccgttg atccgcgcct tgagcccgag gccggtgcgc
    21061 accgcctggc gcacgcattc cgcgttgatc accggcagca tgccgggcat ggccgcatcg
    21121 accagggaaa cgtgcgcgtt cggctcgccg ccaaactcgg tcgaggcgcc ggagaacaat
    21181 ttcgcccgcg aggtcacctg ggcatggacc tccatgccga tgaccacttc ccagtcgccg
    21241 gtcgcgccct tgatcagctt cgattttgct gccggtgcat ccatagtgag gcgagcttgt
    21301 tcgctgcggg ggcggttacg cgctcccgcg gtctacggca agcccagccc cgaagcacct
    21361 tcaaccggtg gtgctgtggt tcaggtctag tgggcgccgc acttcaccga gcagaccggc
    21421 tcgtagcagc tgacgatcgg cgtccatacc ccgttcaggc accacccctg ctcgcaccac
    21481 tgcgtggtcg ggttacagtg atgggagcag accatgccgc tggcgacgat gaccctcttg
    21541 tcggcgacgc aagagccagg tgccggcttc atcatcctcg ccgcccacgc ggcgccggaa
    21601 aagctcaagg caacgccggc cacggctgcc aacacggcca ttttcgatag tgcacttgtt
    21661 cccatgtgcg ttccccctcc ggttgcgcac cttcatgtta catcggcgcc gaaaccgcgc
    21721 aaggcgctcg gacgtcgccg gcgaggctac gtgccttcgc gccagatgcc gagcgcttcc
    21781 tgcgccggcc ggtcggagat cgagaacagc accgattgct ttgccgccat atgcgcatag
    21841 cgcttccagg gcggcaccac gaagacgtcg ttcggccccc attgcagcac ctgaccgtcg
    21901 acttgcgtcg agccggcgcc ttcggcgcag acgaagatcg tgccatcggt cgagcggcag
    21961 ggctcgccgt gaaacccttt cggcagcatg gcgagcgcag cgcccatcgt cggcagcacc
    22021 ggaccgccgg tgatgggatt ggcgtagcgc acccgcgcgc cgtggcgcgg gtcgatgttg
    22081 ccggcgagca gcatgcgctc gatgatcgga cgcgtgcgcg cataggtgta gttgatgacc
    22141 gggctgcggt tggtcgccgc cgtgccgtcg ggcagcacgc cggaaccgta gaaagcgagc
    22201 gagtcgccgt cctgccgttt ggtctcctgc ttctgctcct cgaaatcctc cgcgaagcag
    22261 gcttcataga agttgaccgc cgggtaatcg agcacgtcga gccacaacat cggcttgtcg
    22321 gaggggttgc cgtgatcgtg cgccgcccaa ttggcggtga tgacgaagtc gccgggcgac
    22381 atcacggcct tctcgccctc cacggcggtg taggcgcctt ccccgtcgag cacgaaacgg
    22441 atcgccgagg agacgtggcg atgggccggg gcgatctcgc ccggcaggat catctggata
    22501 ccggcgaaca gggtgttggt ggcgcgcgat tcgccgcgca gaccgggatt ttccaggatc
    22561 aacacgcggc gcttggcctc ctcggccgtg atcaagctgc cggattccat gaccagcgat
    22621 ttcacgtcgt ggtagtgcca gatcacgggc gcgcagcgcg tcaccggctc gtcggtgatg
    22681 atcgtgctca tcaccttcca cagcggcgcc atgtcgtggc gggcgacgcg ctcgtagtag
    22741 gcctcgcgca tcttcgcgag gttatgcttc cgatcgggtt cgcccgagct cgggggcttt
    22801 gcggccgcga ccgacatggc atcctccgtg gaaccgacag caggaatttc cgcaaatata
    22861 ccagggcgcg cctgtcggcg gaatgccggt tcaggacctg ggaccgtgct gcacgatgaa
    22921 tttggcgaag gcggcgagct gctggcggat gaaaccgacc gtctgctggt cggtgatttc
    22981 gccggtcttg gcgtcgatcc gtgtcgagca attgccgatg aagatttccg gcttgttgag
    23041 ggtcatcgcg tcgagaaaga tcatcgcccg gcgcagatcg tactgcatgc ggccgcctcc
    23101 gagcatgccg tttgcggccg attggagggc gaccggcttg ccggcgaagg gctggttggg
    23161 cacccgcgat acccagtcga tcgcgttctt gaggccgccc ggaatggaaa aattgtattc
    23221 cggcgagttg aaaatcactc cgtcggccgc acgcaccgcg tcggcgagcc tctgcaccgg
    23281 cggcggaaat ccgctcgctt cctggacgtc ggcattgtag agcggaaact cggaaaacgg
    23341 cggcgcttcc gtaatgttca tgccggccgg cgccagcccc ggcagcgcgt tcatgaccat
    23401 ccggttgtag gaaccccgcc gcaggctgcc gcaaatgcac atgacgttga gcgtccggtc
    23461 ggccatggcg tccccttctc aattgcgggc gtgagagatt cgcggtttca attcgcgtcg
    23521 cgctcaacgc ggccgcggcg agccggatgc cccggggggg cgctatgtgc tcggcgagct
    23581 gacgagcgcc ggcgcgacga tgtccttcca gctctgcggc ggcgatttga ggtcgccgtg
    23641 ccggcccatg aaggcggcaa acgcctcgac gccgtgaacg gcactgccga actcgtcctt
    23701 gatctccttc aggatcgatt cgacggcggc ggcatcaagc gtccgcgacg gctcatgcgt
    23761 gagatagatg tgcgcggcgc ggcgcggatc gtcatggatg atgcccgccg cttcgtccat
    23821 ggccttggcg atcgcctcgg ccgccttcgg ctgcgcggtc acgtatcttc gcgtggcgcc
    23881 gaggacaaga aaggaagcct tgccacccaa tatatcggcc gatgtgagca ccttgtggat
    23941 gcggccgtct tcgagcgcga cctgcgtata cggtgcggag gcgaaatagc ccgtcgtggg
    24001 cccggcggcg gcaacgagag cggccaccgc gtccggatgg gcgagggtca cgatctggcc
    24061 ctgcagccgg tcgaactggc cgaaggtctt ctccgactgc atccgcaaca gatacgcttg
    24121 cggcgaggac gccgtcggca ccgcgatgcg gtcggtcggc cggaaatcgg caagcgtgcg
    24181 cacccccgcg cgattggtca gaagcgtgag cggcagcgtg ctcaggcccg ccacggcgag
    24241 gatctgacgc gggctgccct tgcccttctc ccacgccgca agcagcgggg cgacgccgaa
    24301 cggcgcgacg tcgatggcgc ccgaagccaa cgcgtcttgc agcgggccgg cgccgagaaa
    24361 gcgctggtag gtggctttga ggttgagatg cgcgtccttg ccgtgcttct cgatcagctt
    24421 caaatcctcg cacagaaaga tcggcagaaa ggcgaggccg aaccccatgc cgatgcgcac
    24481 cggctcctgt gcgcgcgccg gtgcggccac gaccgccaat gcgaggacga gcgccaggcg
    24541 gcggagaacc tgccgcgagc gcccgcgatg cgcagctttg ccgcgaagca tcttgtactc
    24601 atcccacctt ttcgtccgcg atcgggttgc gcagcacacc gatgccggca atttcgatct
    24661 cgcagacgtc gccgtttttc atccacaccg gcggctggcg ggcgtgccca acgccggagg
    24721 gcgtgccagt gaagatgaca tcgccgggtt caagcgtcat gccttgggtg atgtacacga
    24781 gcatctcgac aatcgggaac atcatgttgt cggtattgtc ggactgcatc accttgccgt
    24841 tgagccggct ttcgatcttc agtcccttgg cgccgggcgg aagttcgtcg gcggtcacga
    24901 gccaggggcc gaagccgccg gtgcggtcga aattcttgcc catgtcccat tgcgtcgtct
    24961 tgcgctggaa ttcgcgcacc gatccctcgt tgccacagga atacccggcg atgcaggaga
    25021 gcgcatttgc ggcggtcaag tgcttggcgc gcttgccgac caccaggatc atctcggctt
    25081 cgtagtcgag cgtttcggtg acctgcgggc gcatgatcgg ctggccgtgc ggcaccagcg
    25141 aggtgagacc gcgcatgaag atggtcggaa atttcggaat gttgtcgcgc tgcggacctt
    25201 ccttcacgtg ctcgaggtaa ttcagtccga ggcaaagaat cttgccgggg cggccgacag
    25261 gcagccggta ggtcaaatcc gcgagcggcc tgcgcgcgct ggcgggagcg cgcttggcga
    25321 tatcggcaag cggcccggtg tcgccgttgt tcttcgccag gatctcgccg agatcggcag
    25381 gcaggttgcc gtcggcggcg ttgaggtcga tcacctgatc gccttccaca atgccgagcc
    25441 gcgttccgcc ctgcccttcg aatgcaacaa ttttcatgag cgttgtttcc tcgctgtcat
    25501 ggatcatccg gaaagggccg cgactatagt gcgcagcccg gattgggcga agcaaaatcc
    25561 gggagttgac cggacggcgc ccgccaagat cgcggttttt gccggcgctc aatccggtct
    25621 tgtcaaaaag tgctccttga gccgttcgcg cgcggcgagc ccgccggcga gatcgaaacc
    25681 gttgacaatg gcaagccgga agccgcccgg cggcatcgca tgacgctccg gcgcacgatc
    25741 ttcgtggaac gtgatctgca cgctgctcac accggccatt tgcttgacct cttcgagcag
    25801 ggccggcggc ggatggaggt agcgcacccc ggtcggtcca aacagcacga cgctgtagcc
    25861 gtcacggcgg tcttcatcgg tgaaattcca gatgccctgt tcgtagagct gcaccaatgc
    25921 cccgagccag ccgaccccgt agaggtccgg ccattggtcg gcgaagcgaa ggtgcgcctc
    25981 gatgatcctg ccgccgatgg tctcgaggtt gagcatgccg gtatagccgg gaagacgcgc
    26041 gcgtacccag gcgccgcagt gcgcttcgat aacgggctcg gacgccgcct gcaccgtcca
    26101 ataatcgaac gtgccaccgc cggcgacctc gccggtgacg tgccgccacc agcgcggctc
    26161 gccatcgacc acggcgatat cggttgagag atggcggccg tcgagcagcg gcatccagaa
    26221 atggccgggc gcgtagtgct catcgtagtc ggcttgcgag tgcagcacgc ggctgccggc
    26281 gcccatgccc ttgagattga cgatcggctt ggagaacaca gggaagcgtg gcggcggcgt
    26341 gccgtggggc ccggcttcga gattttggct gagcgccacc gcgagcttgt cgtagatcca
    26401 gcgatgcctc gggtaccact gccaggcatc gctgtcctcc gtcgggatgt ttgccgcggt
    26461 ctcaacccgc gcgaagtatt gcaggcgcca aggatcggct tcgcagatcg gcatggatca
    26521 gagacggagg acagagacga aggaccgcag gagtatagtc cgtggtttgg cgtgcgtcgt
    26581 ccgccttctg tttcctcagc cttggcgccg cgccctggtc cgcgccgcct tcttgcctgc
    26641 cgcggaacgg cgaaccgctc ccttggtgcg tgcagcctgg cgggcggagg cggagcgctg
    26701 tgccgcgctg cgccttgcag cggcggtgtg agcctgacgc gagagcgctt tgtgcgagac
    26761 ggtgttgcgc ggctcgcgct tgagcgcccg tgacacggcg cccgacacgc gcggccgccg
    26821 ccggggcttg cgctttccca gcccggcttc gtaggcgtat tcagcgctct tgcgggtccg
    26881 ctcggtgacc tggccgcgct taggcggcgg cagcttgact ccggcccgcc gcgcctcgga
    26941 aagcccgatg gcaattgcct gcttggtgga gcgcgcgcca tgctcaccgc ggcggatctt
    27001 gtcgatctcc tcgcgaacga actcgcccgc ctgcgtcgac ggtgatttgc cctcgcgccg
    27061 atccttgcgg gccttttcga cggttcgctt gagcggcatt tcatcctcca tgcgcccagc
    27121 cattaaagat aacgcctagg ggtgccgacg gttcggagga ggcgcgatgg aagacggcgg
    27181 atggttacgg acgcgctgct tcggcggcct ctcatctgtc gtcggccacc cgcaacagat
    27241 gaacactgaa cagaccgtcg ctccagaccg cgagcggcga ccagccgctg ccgtgagcca
    27301 gcgcctggaa ggaatcgacc gaatatttgt aactgttctc ggtgtggatc gtctcgccgg
    27361 cgcggaactc gccagtgacg ccgcacactc tgaccttctg ccgcctggtg ctggcgaggt
    27421 gcatctcgat gcgccggcgc tcggcgttgt agaaggcgtg gtgctcgaag gcggcaagat
    27481 cgaaatcggc accgagctcg cgattgatgc gggcgagcag attcaggttg aattttgcgg
    27541 tcacgccggc agcgtcgttg taggcgcgat agaggatgtc cggcgccttg atgaggtcga
    27601 ccccaaccag aagaaccgcg ccgacgccca agaggtgccc ggcgcggcgg agaaatcccg
    27661 ccgcctcatg cggctcgaaa ttgccgatgg tcgagccggg aaagaaaccg acgcggggca
    27721 tcgacgccac cgccgccggc agctcggacg ccaccgtgaa atcggcaatg accggatgaa
    27781 cggcaaggtg ggggaaatcg cgccgcagct gcgctgcatc ctgctgcagg aaatctccgg
    27841 aaatgtcgat cgggacatag gcctcgaccg tcgctgcggc gccgagcaga atgcgcgcct
    27901 tgcggctcga gccgccgccg aattcgatca gggcgcagtt ttgcggaaac agcgatgcga
    27961 tcgccggcgc gttgtcctgc agaatgccga tctcgctgcg ggtcggataa tattccggca
    28021 gcccggtgat gcggtcgaac agcgccgagc cggcaagatc gtagaaatat ttcggtggca
    28081 ggcttttcgg tttggcggcg agaccggcaa ggacgtcggc cgcgaacgga tcgttcgttg
    28141 cagccggtgc cgcgcgccgc gcggtttgga cagctcgtgt catgactttg ctcagtgttc
    28201 gtattccgcc aggcgcaatc cgctgaattg ccagcgtgcc gacggataaa agaagttgcg
    28261 atagcttgag cgcgaatgcc cggccggcgt cgccagcgac gaaccgcgca acaccatctg
    28321 gttgaccatg aacttgccgt tgtattcgcc gagtgcaccg ggcggagctt tgtagccggg
    28381 atatggggtg taagcgccgc gtgtccactg ccagacgacg ccgaacgcgt cattgagcac
    28441 gccgcttttg gcggcgactt cccattcgcc ctcggtcggc agatccttgc ccgaccagcg
    28501 cgcgaaagcg tcggcctcat aatagctgac gtgacagacc ggtttcgcgg catcgacc
//
LOCUS       DATMQB010000434         7291 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1765207, whole genome shotgun sequence.
ACCESSION   DATMQB010000434 DATMQB010000000
VERSION     DATMQB010000434.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7291)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7291)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7291
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1765207"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1093)
                     /locus_tag="VNY79_12470"
     CDS             complement(<1..1093)
                     /locus_tag="VNY79_12470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit F"
                     /protein_id="HWX73308.1"
                     /translation="MTFDALTGVLLIPAIAAALLAALPGYRATARLNVAATTLTFLCA
                     LSLFFWRPRSGSYLLVDDLNGTFIVLTTFVAFTTSVFSLSYIGHELEIGRLTPPYVRF
                     YHAMYQVLMFAMNLALVANNIGLMWVAIELATLTTVLMVGIYRTHEALEAAWKYFILG
                     SVGIALALFGTILVYMAARPVVGEGLDAMVWTVLVKRAGAFDPALLDVAFVFLLLGYG
                     TKVGLAPLHAWLPDAHAEGPTPISAVLSGLLLNVALYALLRFKMLLAVNAAALAPGPL
                     MVTLGLISLVFAAFMLYRRRDIKRLFAYSSIEHMGIITFAFGMGGPLANFAGLLHMTM
                     HSLTKSAIFFAVGHVAQVKGTQRIADMGGL"
     gene            complement(1090..1752)
                     /locus_tag="VNY79_12475"
     CDS             complement(1090..1752)
                     /locus_tag="VNY79_12475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006200993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase-4 component E"
                     /protein_id="HWX73309.1"
                     /translation="MSRIDFDIAHLLAGLLVLISFLELYQDRLYALLNVFAAHALVLA
                     ASVAWQAFVQDAPHLYVTAAIALLFKAIVIPVALHRIIVRLGIHRAIEKVVGVGTAML
                     AGIGLVALSMVVMLRVTHEADPLAREDLAFALAVVLLGLLMMVTRRNAVSQVVGFMSL
                     ENGLVLAATGAKGMPLVVEISVAFSILIAFIVIGIFLFRIRERFDTVDVQALDRHRGE
                     RR"
     gene            complement(1752..2708)
                     /locus_tag="VNY79_12480"
     CDS             complement(1752..2708)
                     /locus_tag="VNY79_12480"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011089080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HWX73310.1"
                     /translation="MVLIRDFAIQGVQMLLVLLLAPLFTGFVRKVKARLLRRQGPPLI
                     QPYLDLVRLSRKEVVLADSASWLFRVIPYLVFAATWVAASLVPTFRTGLLFSWSADLI
                     AIIALLASARFYLALAGLDVGTSFGGIGSSREVMIASLAEPAMIMIVFTLALIAGSTQ
                     LSTVAEFMASPQVGLRVSLGLAVVGLVMIAIAENGRVPVDNPATHLELTMVHEAMVLE
                     YSGRHLALIELSSSLKLILYVSLLACLFAPWGIAGASAALPALAVGVAAYGGKLAIGG
                     FLLALFETSIAKMRVFRVPEFLGVALMLGLLATLLRFVSASF"
     gene            complement(2699..4708)
                     /gene="hyfB"
                     /locus_tag="VNY79_12485"
     CDS             complement(2699..4708)
                     /gene="hyfB"
                     /locus_tag="VNY79_12485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_004119439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="hydrogenase 4 subunit B"
                     /protein_id="HWX73311.1"
                     /translation="MTLTVALACSAGLLALAAVAVAIGREAAATRFVYGASTAIAAIS
                     LVAAAANLVAGEAPASLVLPLGIPWLGAHFRLDALSAFFLLVIDLGALSASLFALGYG
                     AHEEAPERVLPFYPAFLAGMTLVVLADDAFTFLVSWEFMSLTSWALVMSHHRVAENVR
                     AGFVYLVMASFGTLSLLLAFGLLAGPDGLYAFEQMRAAHPSAMLGALALILALVGAGS
                     KAGIVPLHVWLPLAHPAAPSHVSALMSGVMTKVAVYGFVRIALELAGPPAWWWSIVVL
                     ALAGITTVMGVLYALMQHDLKRLLAYHTVENIGIIFIGLGLALAFKAHGMLFAAALAF
                     TAALLHVFNHSLFKSLLFFGAGAVLTATGERDMEHLGGLIHRMPQTAFAFLIGCAAIS
                     ALPPLNGFVSEWLTFQAILLSPQLPSWGLKLLVPAVGALLALSAALAAACFVKAYGVT
                     FLGRPRTPVAQTAAETDRFSLAAMFLLAALCLLAGILPGLFIDALAPVSAALIGERMP
                     AQIGAQWLSIVPIAASRSSYDGLLVFLFMIISGGLAASAIHRLASDRLRRAPAWDCGY
                     PDASPATQYTAMSFAQPIRRVFGTVVFSARETGEMPPPGDTRPARLTVTLSDPVWDSL
                     YAPLAAAIGFTADQLNRLQFLTIRQFLSLVFCALVALLLVLAVWS"
     gene            complement(4705..4959)
                     /locus_tag="VNY79_12490"
     CDS             complement(4705..4959)
                     /locus_tag="VNY79_12490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012385434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HWX73312.1"
                     /translation="MITAGQLRASRALLGIDRRQLAEAAGLSLPTIQRMEASEDVIRG
                     NVDSLMKLVGALEALGVELISADAASHSGGRGVRLKRPTP"
     gene            complement(5176..6132)
                     /locus_tag="VNY79_12495"
     CDS             complement(5176..6132)
                     /locus_tag="VNY79_12495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HWX73313.1"
                     /translation="MAVRCAILDDYQNVALTMADWSKVKGDVAIKVFNEHLGSADKVV
                     EALKGFAIVCAMRERTAFPRAVIEALPELKLLITTGMRNASIELEAAQARNVVVCGTP
                     SFGNATAAIATGLMLDLARHICYEQVRLKAGAPWQTTIGLDLEGMTLALLGLGRLGTR
                     MAEIGQAFRMNVIAWSQNLTPERCQKVGVEAVSRDDLFRRADFLSIHLQLSPRTRSLV
                     GARELGLMKGSAYLINTSRGPIVEEAALIAALREKRIAGAGLDVFDIEPLPVEHPLRA
                     LDNVVLTPHLGYVVEQNYRAFFGGTVDAIRGFLDGKPVRVLT"
     gene            complement(6270..6443)
                     /locus_tag="VNY79_12500"
     CDS             complement(6270..6443)
                     /locus_tag="VNY79_12500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016839693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73314.1"
                     /translation="MRAVRELWRTFGGAFDPYRPERHYMRGPGPKCHAKRAGLMAQTA
                     AAGLGANFANLPG"
     gene            6810..>7291
                     /locus_tag="VNY79_12505"
     CDS             6810..>7291
                     /locus_tag="VNY79_12505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018273360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HWX73315.1"
                     /translation="MARQFIYHMQGLSKAYPGNRKVLENVHLSFYPDAKIGVLGVNGS
                     GKSTLLRIMAGLDEEFSGEAWVAEGATVGYLAQEPQVDPAKSVRDNVMEGVAAQRAIL
                     DRYNELAANYSDETADEMTKLQDEIEAKDLWDLDSKVDQAMDALRCPADGADVAQLSG
                     G"
BASE COUNT         1463 a         2301 c         2481 g         1046 t
ORIGIN      
        1 tgaggccgcc catgtcggcg atccgctgcg tgcctttgac ctgggccacg tggccgacgg
       61 cgaagaagat cgccgacttg gtgagcgaat gcatggtcat gtgcaggagg ccggcgaaat
      121 tggcgagcgg accgcccatg ccgaatgcaa aggtgatgat gcccatatgc tcgatcgacg
      181 agtaggcgaa cagccgcttg atgtcgcgcc ggcggtagag catgaacgcg gcgaatacga
      241 gcgagatcaa tccgagcgtc accattagcg ggccaggtgc cagcgccgcg gcgttcaccg
      301 ccagcaacat cttgaagcgc agcagcgcat agagagcgac gttgagcagc agacccgaga
      361 gcactgccga gatcggcgtc gggccctcgg catgtgcatc gggcagccag gcatgcagcg
      421 gcgcgagccc caccttggtg ccgtagccga gcagcagaaa aacaaaggcg acgtcgagca
      481 gcgccgggtc gaaggcgccg gcacgcttga cgagcacggt ccagaccatg gcgtcgaggc
      541 cttctcccac caccggccgc gccgccatgt agacgaggat ggtgccgaac agggcaagcg
      601 cgatgccgac gctgccgaga atgaaatatt tccatgccgc ttccagcgcc tcgtgggtac
      661 ggtagatgcc gaccatgagc accgtggtca gtgtcgccag ctcgatcgcc acccacatca
      721 gcccgatatt gttggcgacg agcgcaaggt tcatcgcgaa catcagcacc tgatacatgg
      781 catggtagaa gcgcacgtac ggcggggtga gccgaccgat ctccagctcg tgaccgatat
      841 agctcaagct gaaaacgctg gtggtaaagg cgacgaaggt cgtcagcacg ataaaggtgc
      901 cgttgaggtc gtcgaccagc agataggagc ctgaccttgg tcgccaaaag aacagcgaca
      961 gcgcgcaaag gaatgtcagc gtcgtcgccg cgacattgag ccgggccgtc gcgcgataac
     1021 cgggcagtgc cgccaatagc gcggcggcta tcgcgggaat cagcagaaca ccggtcaggg
     1081 catcgaacgt catcggcgct ctccgcggtg acggtcgagc gcctgtacgt ccacagtgtc
     1141 gaagcgctcg cggatgcgga acagaaagat cccgatcacg atgaaagcga tgaggatgga
     1201 gaaggcgacg ctgatctcga ccacgagtgg catgcccttg gcgccggtcg ccgctaggac
     1261 cagaccgttc tcgagtgaca tgaagccgac gacttggctc acggcgttcc ttcgcgtcac
     1321 catcatcaac agccccagca gcaccaccgc gagcgcgaag gcgaggtcct cgcgcgccaa
     1381 cgggtcggcc tcatgggtca cgcgcagcat caccaccatg gagagggcga cgagccctat
     1441 gccggcgagc atggccgtac cgacgcctac caccttctcg atcgcgcgat ggatgccgag
     1501 ccgcacgatg atccgatgca gcgctaccgg aatgacgatc gccttgaaca gaagggcgat
     1561 cgccgcggtg acatagaggt gcggcgcatc ctggacgaac gcctgccagg cgaccgaggc
     1621 cgcgagcacc agtgcatgcg ccgcgaaaac attgagcagc gcgtaaagcc gatcctggta
     1681 cagctcaagg aagctgatca gcaccaacag gccggcgagc aggtgagcga tgtcgaagtc
     1741 gatccggctc atcagaagct cgccgacacg aagcgcagca gcgtcgccaa tagcccgagc
     1801 atcagcgcca cgccgaggaa ttccggcacg cggaacacgc gcatcttggc aatcgacgtt
     1861 tcgaacaggg cgagcaggaa gccgccgatg gcgagcttgc cgccataggc ggcgaccccg
     1921 acggcgagcg ccggcagcgc cgcgctcgcc ccggcgatgc cccagggcgc aaaaaggcag
     1981 gcaagcagcg agacgtagag gatgagcttg agcgagctgg acagctcgat cagcgccaga
     2041 tggcggccgg aatattcgag caccatggcc tcatgcacca tggtcagctc gagatgggtc
     2101 gccggattgt cgaccggcac gcggccattc tcggcgatcg cgatcatgac caggccgacg
     2161 acggcgaggc cgagcgaaac gcgcagtccg acctgcggcg aggccatgaa ttctgccacg
     2221 gtcgaaagct gcgtcgaacc ggcgatcagg gcgagcgtga acacgatcat gatcatcgcc
     2281 ggttccgcga gcgaggcgat catcacctcg cggctcgatc cgatgccgcc gaagctcgtg
     2341 ccgacgtcga gcccggcgag cgccagatag aagcgggcac tggcgagcag cgcgatgatc
     2401 gcgatgagat cggccgacca ggagaacagc aggccggtac ggaatgtcgg caccagcgag
     2461 gccgcgaccc acgtggcggc gaagacgaga tagggaatga cgcggaacag ccaggaggcg
     2521 gaatccgcca gtaccacctc cttgcggctg agccggacca gatcgagata cggctgaatg
     2581 agcggcgggc cctgccggcg caacagccgc gccttcacct tgcgcacgaa gccggtgaac
     2641 agcggcgcca gcagcagcac caagagcatc tgcacgccct ggatggcgaa atcgcggatc
     2701 aggaccatac ggcgagcacc aagaggagcg cgacgagggc gcagaagacg aggctcagga
     2761 actggcggat ggtcaggaac tgcaggcggt tgagctggtc ggcggtaaag ccgattgcgg
     2821 cggcgagcgg cgcgtagagc gaatcccaga ccggatccga gagcgtcacc gtgagccgtg
     2881 ccgggcgcgt gtcgcccggc ggcggcatct cgccggtctc gcgggcgctg aacacgacgg
     2941 tgccgaatac gcggcggatc ggctgcgcaa agctcatcgc cgtgtattgc gtcgccggac
     3001 ttgcgtcggg gtaaccgcag tcccaggccg gagcgcggcg caaccgatca gaggcgaggc
     3061 ggtggattgc tgacgccgcc agtccgcccg aaatgatcat gaatagaaag acgagcaggc
     3121 cgtcatagga actgcggctt gcggcgatcg gcacgatcga cagccattgc gcgccgatct
     3181 gcgccggcat gcgctcgccg atgagggcag cgctcaccgg cgccagcgca tcgatgaaca
     3241 ggccgggcag tattcccgcc agcaggcaaa gcgccgccag cagaaacatc gccgccagcg
     3301 agaagcggtc ggtttccgcc gccgtttgcg cgacgggcgt gcgcgggcgg ccgaggaagg
     3361 tcacgccgta cgctttgacg aagcaggcgg cggcgagcgc ggccgagagc gcgagcagcg
     3421 cgcccacagc tggcaccagg agcttgagcc cccatgacgg cagctgtggg ctgagcagaa
     3481 tcgcctggaa cgtcagccat tcggagacga agccgttgag cgggggcagc gccgagatcg
     3541 ccgcgcagcc gatcaggaaa gcgaacgccg tctgcggcat gcggtggatg aggccgccga
     3601 gatgctccat gtcgcgttcg ccggtcgcag tcagcacggc gccggcgccg aagaacaaaa
     3661 ggctcttgaa cagcgaatga ttgaagacgt ggagcagtgc ggcggtgaac gccagcgccg
     3721 cggcgaacag catgccgtgc gccttgaagg cgagcgcgag gccgaggccg atgaagatga
     3781 tgccgatgtt ttccaccgtg tggtaggcaa gcaggcgttt gagatcgtgc tgcatcagcg
     3841 catagagcac gcccatcacc gtcgtgatgc cggcgagcgc cagcacgacg atgctccacc
     3901 accaagccgg cggcccggcg agttcgagcg cgatgcgcac gaagccgtag acggcgacct
     3961 tggtcatcac cccgctcatc agggcggaga cgtggctcgg cgccgccggg tgagcgagcg
     4021 gcagccacac atgcagcggc acgatgccgg ccttcgagcc cgccccgacc agcgcgagga
     4081 tgagcgcaag ggcgccgagc atggcggaag gatgcgcggc acgcatttgc tcgaacgcat
     4141 aaagtccgtc aggcccggcg agcaggccga aggcgagcag cagagagagc gtgccgaagc
     4201 tcgccatcac cagatagacg aagcccgcgc gcacgttctc cgcgacacga tggtgcgaca
     4261 tcacgagcgc ccacgaggtg agcgacatga attcccagga gacgaggaac gtgaacgcgt
     4321 cgtcagcgag caccaccagc gtcatgccgg caagaaaggc gggatagaac ggcagtacgc
     4381 gctcaggcgc ttcttcgtgc gcgccgtagc cgagcgcgaa caggctggcg ctcaaggcac
     4441 cgagatcgat gacgaggagg aaaaacgcag agagcgcgtc aaggcgaaaa tgggcgccaa
     4501 gccatggtat gccgagcggc agcacgaggc tcgcgggcgc ttccccggcg acgagatttg
     4561 ccgccgcggc aacgagcgaa atcgccgcaa tcgcggtgct cgcgccgtag acgaagcgcg
     4621 tcgcagccgc ctcacgcccg atggccacgg caaccgccgc aagcgccaac aatcccgcgg
     4681 agcaggctag cgctactgtc agcgtcacgg tgtcggcctc ttgagccgca cgccccggcc
     4741 gccggaatgg ctcgcggcgt cggccgagat gagctcgacg cccagcgctt cgagggcgcc
     4801 gacgagcttc atcagcgaat ccacgttgcc gcggatcaca tcctcgctcg cttccatgcg
     4861 ctggatggtc ggcagcgaca gcccggccgc ttcggcgagc tggcgccgat caatgccgag
     4921 gagcgcgcgc gaggcccgga gttggccggc ggtgatcata gggcagatgt cagaattgat
     4981 gtctagcaca tatatactta tgactaaaat atcgcctaag gtgcagcaat cgttattctc
     5041 aaggcatgca cagcattgtg gtgccctcgg cggcgggtgg ccggcccagg ttctttttgg
     5101 ctttctcaat ttggacgggc gcgcccggta agaggcgccc gacgagcgcg aaatccggaa
     5161 aacggcaggc agggcttacg tcaaaacgcg cactggcttg ccgtcgagaa agccgcggat
     5221 cgcgtccacc gtgcccccga aaaatgcgcg gtagttctgc tccacgacgt agccgagatg
     5281 cggggtgagg acgacattgt cgagcgcgcg cagcgggtgc tcgaccggca gtggctcgat
     5341 atcgaagacg tcgaggccgg cgccggcgat acgcttttcg cgtagcgcgg cgatgagcgc
     5401 cgcttcctcg acgatcggcc cgcgcgatgt gttgatgagg taggcgctac ccttcatcag
     5461 accgagttct ctggcgccga cgaggctgcg tgtgcgcggc gacaattgca ggtggatgga
     5521 gagaaagtcg gcccggcgga acaggtcgtc gcggctcacc gcctcgacgc caaccttctg
     5581 gcaccgttca ggcgtgaggt tctggctcca ggcgatgacg ttcatccgga aggcctggcc
     5641 gatctcggcc atgcgggtcc cgagcctgcc gaggccgagg agcgccagcg tcatgccttc
     5701 gagatcgagg ccgatcgtgg tctgccaggg cgcgccggcc ttgagccgca cttgctcgta
     5761 acagatgtgt cgcgccagat cgagcatgag gccggtggcg atggccgcgg tcgcattgcc
     5821 gaaactgggc gtaccgcaga cgacaacatt gcgcgcctgc gccgcttcga gctcgatcga
     5881 ggcgttgcgc attccggttg tgatcagaag tttgagctcc ggcagcgcct cgatgaccgc
     5941 gcgcgggaac gccgtgcgct cgcgcatcgc gcagacaatg gcaaaaccct tgagtgcctc
     6001 gacgaccttg tccgcggacc cgagatgctc gttgaagacc ttgatcgcga catcgccctt
     6061 caccttcgac cagtcggcca tggtgagcgc cacgttctgg tagtcgtcga gaattgcgca
     6121 gcgaaccgcc atgtcagccc ccctcccgga cgccgccccc cgcggcaagc cggaatctac
     6181 aggcgcgggc gatggatgtc ctcggccgtt tgcgctgcag ctgcggcggc ggacgccttc
     6241 gctgcgccag gaatgacggc gtcgtgcgct tatccgggca gattggcgaa attggcgccg
     6301 agaccggcgg ctgctgtctg ggccatcagg ccggcgcgct tggcatggca tttcggcccc
     6361 gggccccgca tgtagtggcg ttccggccgg taggggtcga acgcgccccc aaaagtccgc
     6421 cacagctcgc gaacggctct catcaaatcg cgccgcatga ccgctcccgc tggctgttcc
     6481 gcgccgcggc tcccttcacg cccaggtttg ggcgcgttcg cgaaggcgcg gctttaccgc
     6541 aaattgtcgg cgtaaaatca ttaaaatttg gtgcgaaatc ttcgttaccg ggccgcggtt
     6601 gcggctaggc tttacgaaat cttgccgcga tcgcgagcgg tggcggcgct ggcggcgttc
     6661 cccggccggg cgcatggccc tgtccgacgg tccttgctct ggacgaacct gatcgctaca
     6721 tcagcgccgc attcccgaaa tcagcgcctt ctggggaccg cgtccgcgag cgtttgtcgg
     6781 gcggcgcaag caagaggatc gagcgcccga tggcgcggca attcatctac cacatgcagg
     6841 gtctctccaa ggcctatccc ggcaaccgca aggttctgga gaacgtccac ctgtcgttct
     6901 atcccgacgc caagatcggt gtgctcggcg tcaacggctc cggcaagtcg acgctactgc
     6961 gcatcatggc aggcctcgac gaggaatttt ccggcgaagc ctgggtggcg gagggcgcga
     7021 ccgtcggcta tctggcgcag gagccgcaag ttgatccggc aaagtcggtc cgcgacaacg
     7081 tcatggaggg cgtcgcggcg cagcgggcga tcctcgaccg ctacaacgag ctcgccgcga
     7141 actattccga cgagaccgct gacgagatga ccaagctgca ggacgagatc gaggccaagg
     7201 acctctggga tctcgactcc aaggtcgacc aggcgatgga cgcgttgcgc tgcccggcgg
     7261 acggcgccga cgtggcgcag ctttccggcg g
//
LOCUS       DATMQB010000435         5461 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4232917, whole genome shotgun sequence.
ACCESSION   DATMQB010000435 DATMQB010000000
VERSION     DATMQB010000435.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5461)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5461)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5461
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4232917"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..655)
                     /locus_tag="VNY79_12510"
     CDS             complement(<1..655)
                     /locus_tag="VNY79_12510"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX73316.1"
                     /translation="MHELLQQIFSGLAAGAVYASVALALVMIYRATDLVNFAQGEMAM
                     FSTYIAWSLVTVGLPFWAAFLITLVASFLGGMAIERIIIRPVENAPVLAAVIVTIGLG
                     LIFNSLAGWFYSYTVQDFPSPFPDRPLFGALMTTQELGVVGVTLVMLTLLFLFFRFTK
                     TGLAMRAAAQNPESARLCGIPVGRMLAIGWGLAAAIGATAGIMVAPVLFLDPYMMSGV
                     "
     gene            complement(667..1374)
                     /locus_tag="VNY79_12515"
     CDS             complement(667..1374)
                     /locus_tag="VNY79_12515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008135694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73317.1"
                     /translation="MAPILELHRLKAFYGQSEVVHGIDVAVEEGGMTVLLGANGAGKT
                     TTLRAICGMVRSEGEIRFAGEQLERRTTEQIAGLGVAHVPEGRGTFMALTVEENLRLG
                     GYTRAGRPDADIQRMYGYFPILAARQHQQAGSLSGGEQQMLAIARALMMGPRLLVLDE
                     PSFGLAPRIVEEIFNIVDRIRREEHVSVLLVEQNASLALELADHAYLLETGYVVTSGS
                     AKALADDPQIRRSYLGY"
     gene            complement(1374..2189)
                     /locus_tag="VNY79_12520"
     CDS             complement(1374..2189)
                     /locus_tag="VNY79_12520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018646805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73318.1"
                     /translation="MTESPPRVAVGPEGGPSPSLLEIEDVAMRFGGIVALDAVTFSVA
                     KGRIMGLIGPNGAGKTTLFNCLSRLYRQARGDIRLNGQSLRRCAPADIAALGVGRTFQ
                     APALFASMSVLDNVKVGAHARGRNGPLTDALTLPSTRREEQELDRTARAMLTFVGLEH
                     LAGRPAASLTLVDRKRVELARALAAQPLLLLLDEPAGGLNHDEVGELGSLIRSIRDQL
                     HVTVLLVEHHMGLVMSLSDQVVVLNFGRVIANGTPDDVRNNPAVTEAYLGTRH"
     gene            complement(2432..3262)
                     /locus_tag="VNY79_12525"
     CDS             complement(2432..3262)
                     /locus_tag="VNY79_12525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0032559 - adenyl ribonucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HWX73319.1"
                     /translation="MIKDILVNLSLGERGGFAGDYAISIATAFEAHVAGIAFLYDPVI
                     PLSGAGYIPADVIDSQERDNADATRAAADRFAQTAARAGVSAEPLTLSTSVAGAGEQF
                     SRLARRFDLAVIGQAEPDTNAIEEVISEAALFESGRPIIIVPYIQKAPLKLDRVMVCW
                     DGGRQAARATADAMPLLERAGRVEVVIVADESGKEDEIAGADMGQHLARHGLDVEVKR
                     MAMGDIDVADVLLSHAADIAADLMVMGGYGHSRLREFVLGGVTRSILGSMTVPVFMSH
                     "
     gene            complement(3363..3737)
                     /locus_tag="VNY79_12530"
     CDS             complement(3363..3737)
                     /locus_tag="VNY79_12530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c family protein"
                     /protein_id="HWX73320.1"
                     /translation="MVAAALIAASAGTTTAQDVEKGANSFKKCLACHAIGPGAQNKVG
                     PVLNGLDGRKSGTVPDFNYSDANKNSGIVWNEQNFEDYIKDPKAKVPKTKMIFPGIKN
                     EQETKDLWAYIKQFDAEGNIKK"
     gene            3975..>5461
                     /locus_tag="VNY79_12535"
     CDS             3975..>5461
                     /locus_tag="VNY79_12535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008965755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-linked oxidase C-terminal domain-containing
                     protein"
                     /protein_id="HWX73321.1"
                     /translation="MPVALPLADADVLARRAEIVAALKRMVPGEGVIAVESAMRPYES
                     DGLTAYRQLPMVVVLPETTEQVAAVLGFCHAQGIKVVPRGAGTSLSGGALPLSDAVLL
                     GMAKFNHIRALDFGNRVAVVEPGVTNLAISQAVEHAGFYYAPDPSSQIACTIGGNVAE
                     NSGGVHCLKYGVTTNNVLGCELALMTGEIVRLGGGHLDSGGYDLLGVVTGSEGLLGIV
                     TEVTVRILKKPECARAALIGFVASEDGGECVARIIGAGIIPGGMEMMDRPAIHAAEEF
                     VHAGYPLDVEALLIIELDGPRAEVDHLLDAVQEIARHCRAVTCRVSNSEEERLLFWAG
                     RKAAFPAVGRISPDYYCMDGTIPRAKLPLVLRRMQELSAKYGLRVANVFHAGDGNLHP
                     LILYDANTPGELERAEEFGADILRLCVEVGGVLTGEHGVGVEKRDLMPVMFSEIDLNQ
                     QQRLKCAFDGKGLLNPGKVFPTLHRCAELGRMHVHAGKVAFPDIPR"
BASE COUNT          913 a         1811 c         1800 g          937 t
ORIGIN      
        1 gcacgcccga catcatgtag ggatcgagga acaacaccgg cgccaccatg atgccggccg
       61 tggcaccgat cgcggcggcg aggccccagc cgatcgccag catgcgtccg accgggatgc
      121 cgcacaggcg cgccgattcc ggattctgcg cggcggcccg catcgcgagt ccggtcttgg
      181 tgaagcggaa gaacaggaac aggagggtga gcatcaccag tgtcaccccg accacgccca
      241 gctcctgggt cgtcatcagt gctccgaaca agggccgatc cgggaacggg ctggggaaat
      301 cctggacggt gtagctgtag aaccaccccg ccagcgaatt gaagatcagc cccaggccga
      361 tcgtgacgat gaccgcggcg agcacggggg cattctcgac cggccggatg atgatccgct
      421 cgatcgccat gccgccgagg aaggaagcca ccagcgtgat cagaaatgcg gcccagaacg
      481 gcaatccgac agtcaccagg ctccaggcga tgtaggttga aaacatcgcc atctcgccct
      541 gcgcgaagtt taccaggtcg gtcgcgcggt agatcatcac cagcgcgagc gccacgctcg
      601 catagacggc gccggcggca agacccgaga aaatctgctg cagcaattcg tgcatcggca
      661 agcccgtcaa tatccgagat aggatcggcg gatctgcgga tcgtcggcga gcgccttggc
      721 gcttcccgag gtgacgacat acccggtttc gaggaggtag gcgtggtccg ccagctccaa
      781 ggcgaggctg gcgttctgct ccacgagcag cacacttacg tgctcctcgc ggcggatgcg
      841 gtcgacgatg ttgaaaatct cctcgacgat gcgcggggcg aggccaaagg aaggctcgtc
      901 aagcaccagg aggcgcggcc ccatcatcag tgcgcgggcg atcgccagca tctgctgctc
      961 gccgcccgac aacgaaccgg cctgctggtg ctggcgcgcg gcaaggatgg gaaaatagcc
     1021 atacatgcgc tgaatgtccg cgtccggccg gccggcgcgg gtgtagccgc cgaggcgcag
     1081 gttttcttcc accgtgaggg ccatgaaggt tccacgccct tccggtacgt gggcgactcc
     1141 gagcccggcg atctgttccg tcgtgcgccg ctcgagctgc tcgccggcga agcggatttc
     1201 gccctcgctg cggaccatgc cgcagatggc gcgcagcgtg gtcgtcttgc ccgcgccatt
     1261 ggcgccgagc agaaccgtca tgccgccttc ctcgaccgcg acatcgatcc cgtgcacgac
     1321 ttccgactgg ccgtagaagg ccttgaggcg gtggagctcg aggatcggcg ccatcagtgt
     1381 cgcgtcccca gataagcctc ggtcacggcc ggattattgc gcacgtcgtc gggcgtcccg
     1441 ttggcgatca cgcggccgaa attcagcacc acgacctgat ccgacaagct catgaccaag
     1501 cccatgtggt gctcgaccag gagcacggtg acgtgaagtt gatcgcggat cgagcggatc
     1561 aagctgccga gttccccgac ctcgtcgtgg ttgaggcctc ccgccggttc atcgagcagc
     1621 agcagcagcg gctgcgcggc gagcgcgcgc gccagctcaa cgcgcttgcg atccaccagc
     1681 gtgaggctcg cggccggccg tccggcaagg tgctcgagcc cgacgaaagt cagcatggcg
     1741 cgcgcagtac ggtcgagctc ctgctcctca cgccgcgtcg acggcagcgt cagcgcatcg
     1801 gtcagcgggc cgttgcggcc gcgcgcgtgg gcgccgacct tgacgttgtc gaggaccgac
     1861 atcgaggcga acagggccgg ggcctgaaag gtgcggccga cgccgagcgc ggcgatgtcc
     1921 gccggtgcgc agcgccgcag ggactggccg ttcaggcgga tgtccccccg cgcctgccgg
     1981 tagagtctgc tcaggcaatt gaacagggtg gtcttgccgg cgccgttcgg gccgatcaat
     2041 cccatgatcc gccccttggc caccgagaaa gtcaccgcat cgagcgcgac aatgccgccg
     2101 aagcgcatgg ccacgtcttc gatctccagc aatgacgggg aggggccgcc ttcggggccc
     2161 accgctaccc tcggcgggga ttcggtcatg cgggcggaac cgccatcttg gacccatcct
     2221 cccgaatcgg cgcgtttctt gaacgctctc acgcctgttg gcgtggcacc tgagccgcct
     2281 cccgcagcgg gccgccgccc aaccaaaaaa ggtggcaggt gaacatgaca tgtcgaatgt
     2341 tcgcgcgtca acgacgggcg cgactatatt ttgccgcacg tgatcgattt ttttgttgtg
     2401 ccgaaagggt gttccatttc ggcgcaggcg cctagtggga catgaatacc ggcaccgtca
     2461 tcgagcccag gatgctgcgg gtgacgccgc cgagcacgaa ttcgcgcaag cgcgaatggc
     2521 cgtagccgcc catcaccatg aggtccgcgg caatgtccgc cgcgtgggac aggagcacgt
     2581 cggcgacgtc gatgtcgccc atcgccatgc gcttgacctc aacatcgagt ccgtggcggg
     2641 cgaggtgctg acccatgtcg gcgcccgcga tctcatcctc cttgccgctc tcgtcggcga
     2701 cgatgaccac ctcgacgcgc ccggcccgct ccaggagcgg catggcatcg gcagtggcgc
     2761 gcgccgcctg ccggccgcca tcccagcaca ccatgacgcg gtcgagcttg agcggcgctt
     2821 tctggatgta cggcacgatg atgatcggcc gccccgactc gaacaaagcg gcttcggaga
     2881 tgacttcttc gatcgcgttg gtgtcgggct ccgcctgccc gatgacggcg agatcgaaac
     2941 gccgcgccag gcggctgaac tgctcgccgg cccccgccac gctggtgctg agcgttagcg
     3001 gctcggccga cacgccggcc cgcgcggcgg tctgggcaaa gcggtctgca gcggccctgg
     3061 tggcgtcggc gttgtcgcgt tcctgggaat cgatcacgtc ggcggggata tagccggcgc
     3121 ccgacagtgg aatgaccgga tcgtacagga aggcaatccc ggcgacgtgc gcctcgaagg
     3181 ctgtggcgat cgagattgcg tagtcaccgg cgaagccgcc gcgctcaccc aggctgagat
     3241 taacgaggat gtctttgatc atgggtcgct cctcggtgcg ggccgcgccc ggcgagtcga
     3301 gggcggccca aacggcgcca ccggcatccg ggaaagaatc aaatgccggc gcgcgccggc
     3361 ccctactttt tgatgttccc ctcggcgtcg aattgcttga tgtaggccca caggtccttg
     3421 gtttcctgct cgttcttgat gccgggaaag atcatcttgg tcttggggac cttggctttc
     3481 ggatccttga tgtaatcctc gaagttctgc tcgttccaga cgatgcccga attcttgttg
     3541 gcgtcggaat agttgaaatc gggcacggta ccggacttgc ggccgtcaag gccgttgagc
     3601 acggggccga ctttgttctg cgcgcccgga ccgatggcat ggcacgccag gcacttcttg
     3661 aacgaattgg cgcctttctc gacgtcctgc gccgttgtcg tccccgcgga cgcggcgatc
     3721 agcgcagcag ccaccatcaa cgtcctcgtt ctcatcggca catctcccct tcggcattgc
     3781 cgcggccaca ctctcgggcc gtatcggccg cgcggttgca tccgcgcggc acacgtttca
     3841 agcggcccag gctcggcctg tcaacggcct attcggcggg ccgcgctgtt gatgggccgt
     3901 caaagcgacc gtcacgcccg tttccggcta tagtgatcgg cgagaatgat cgcggaaacg
     3961 gcggagagac tgtgatgcct gttgccttgc cgctcgcgga tgcggacgtg ctcgcccgcc
     4021 gcgctgaaat cgttgcggcg ctcaagcgca tggtccccgg cgagggggtc atcgccgtgg
     4081 agagcgccat gcggccgtac gagagcgatg gcctcaccgc ctatcgccag cttccgatgg
     4141 tggtcgtgct gccggaaacc accgaacagg tcgcggccgt gctcggtttc tgtcatgccc
     4201 aaggcatcaa ggtggtcccg cgcggggcgg gcacctcgct gtcggggggc gcgttgccgc
     4261 tcagcgacgc cgtccttctc ggcatggcca agttcaatca catccgcgcg ctcgatttcg
     4321 gcaaccgagt cgccgtcgtc gaaccgggcg tcaccaatct cgccatcagc caagcggtgg
     4381 agcacgccgg cttctattac gcgcccgatc cgtcgtcgca gatcgcctgc accatcggcg
     4441 gcaacgtggc ggagaattcc ggcggcgtgc actgtctcaa atacggcgtg accaccaaca
     4501 acgtgctcgg ctgcgagctg gcgctgatga ctggcgagat tgtgcggctc ggcggcggtc
     4561 atctcgattc cggcggctac gatctcctcg gcgtcgtcac cggctcggag gggctgctcg
     4621 gcatcgtcac cgaagtgacg gtgcgcatcc tgaagaaacc ggaatgcgcg cgggcggcgc
     4681 tcatcggctt tgttgcttcc gaggacggcg gcgaatgcgt cgcccgcatc atcggcgccg
     4741 gcatcattcc cggcggcatg gagatgatgg atcggcccgc gatccacgcc gccgaggagt
     4801 tcgttcatgc cggctatccg ctcgacgtcg aggcgctgct gatcatcgag ctcgacgggc
     4861 ctcgcgccga ggtcgatcat ctgctcgatg ccgtccagga gatcgcccgg cactgccgcg
     4921 ccgtgacctg ccgcgtgtcc aattccgagg aggagcggct gttgttctgg gccggccgca
     4981 aggcggcgtt ccccgctgtc ggtcgcatct cgccggacta ctactgcatg gacggcacca
     5041 tcccgcgcgc gaagctgccg ctcgtcttgc gccgcatgca ggaattgtcg gcgaaatacg
     5101 gcctgcgcgt cgccaacgtc ttccacgccg gcgatggcaa cctgcacccg ctcattctct
     5161 acgatgcgaa tacgcctggc gagctcgagc gcgccgaaga attcggcgcc gatatcctgc
     5221 ggctgtgcgt cgaggtcggt ggcgtgctga ccggtgagca tggcgtcggc gtcgagaaac
     5281 gcgacctcat gccggtcatg ttctcggaga tcgacctcaa ccagcagcag cgcctcaaat
     5341 gcgcgttcga cggcaaggga ttgctcaatc ccggcaaggt cttcccgacg ttgcaccgct
     5401 gcgccgagct cggccgcatg cacgtgcacg cgggcaaggt ggcgttcccg gatattccgc
     5461 g
//
LOCUS       DATMQB010000436         2264 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2096279, whole genome shotgun sequence.
ACCESSION   DATMQB010000436 DATMQB010000000
VERSION     DATMQB010000436.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2264)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2264)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2264
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2096279"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2223)
                     /gene="uvrA"
                     /locus_tag="VNY79_12540"
     CDS             complement(<1..2223)
                     /gene="uvrA"
                     /locus_tag="VNY79_12540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008962666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009380 - excinuclease repair complex
                     [Evidence IEA];
                     GO_function: GO:0009381 - excinuclease ABC activity
                     [Evidence IEA];
                     GO_process: GO:0006289 - nucleotide-excision repair
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HWX73322.1"
                     /translation="MIAIRGAREHNLKNIDLDIPRDRLVVFTGLSGSGKSSLAFDTIY
                     AEGQRRYVESLSAYARQFLEMMQKPDVDQIDGLSPAISIEQKTTSRNPRSTVGTVTEI
                     HDYMRLLWARVGVPYSPATGLPIESQTVSQMVDRILALPEGTRLYLLAPVARGRKGEY
                     RKELADFAKKGYQRVKIDGAFYEIAQAPALDKKFQHDIDVVVDRIVVRPDISTRLADS
                     LEQALKLADGLAVAEFADSAAPSPPPAGGRSASEARRVGVRGGADHPTPDRVPRSNPP
                     PPGEGEKRTKLAAAAASDANRLTFSEKFACPVSGFTIPEIEPRLFSFNNPFGACPKCG
                     GLGVEQHIDPELVIPDKERTLRRGAIAPWAKSSSPYYVQTLLALGKHYRFTLEAKWKD
                     LPKKTQDAILYGSGETEIRFSYDDGMRAYETKRPFEGVITNLERRFRETDSDWAREEI
                     ARYFTDVPCAACSGYRLKPEALCVKIGGAHIGEVSELSVRGAAHWFTELPQRLTAKQN
                     EIAGRILKEIRERLKFLVDVGLDYLTLARASGTLSGGESQRIRLASQIGSGLTGVLYV
                     LDEPSIGLHQRDNARLLETLRRLRDLGNTVIVVEHDEDAIRTADYVVDVGLGAGVHGG
                     NIVAQGLPADIMANPNSLTGQYLSGAREIAVPERRPKNPQRVLRLAGARGNNLKNVTA
                     EIPLGLFTCVTGVSGGGKSTLLIDTLYKALARRLNGASEAPARFDRIEGLEHLDKVID
                     I"
BASE COUNT          334 a          695 c          836 g          399 t
ORIGIN      
        1 gatgtcgatc accttgtcga ggtgctcgag gccttcgatg cggtcgaacc gggcaggggc
       61 ctcgctggcg ccgttgagcc gccgcgccag cgccttgtag agcgtgtcga tgagcaaggt
      121 cgacttgccg ccgccggaga cgccggtgac gcaggtgaac aggccgagcg gaatttccgc
      181 cgtgacgttc ttcagattgt tgccgcgggc gccggcgagc cgcagcacgc gctgcgggtt
      241 cttcggccgc cgctcgggca cggcgatttc gcgcgcgccg gagagatatt ggccggtgag
      301 cgagttcggg ttggccatga tgtcggccgg caggccctgg gcgacgatat tgccgccgtg
      361 gacgccggcg ccgagcccga cgtcgaccac gtagtcggcg gtgcggatgg cgtcctcgtc
      421 gtgctcgacg acgatcaccg tgttgccgag gtcgcgcagc cgccgcagcg tttccaggag
      481 ccgggcgttg tcgcgctggt gcaggccgat cgagggctcg tcgagcacgt agagcacgcc
      541 ggtgaggccg gagccgatct gcgaggcgag gcggatgcgc tggctctcgc cgcccgacag
      601 cgtgccggag gcgcgcgcca aggtcagata gtcgagcccg acgtcgacca gaaatttgag
      661 ccgctcgcgg atctccttga ggatgcggcc ggcgatttcg ttctgcttgg cagtgagccg
      721 ctggggtagc tcggtgaacc agtgcgctgc gcctctgacc gacagctccg agacttcgcc
      781 gatatgcgcg ccgccgatct tgacgcacaa cgcttcgggc ttgagccggt agccgctgca
      841 cgctgcgcac ggcacgtcgg tgaagtagcg ggcgatctcc tcgcgcgccc agtcgctgtc
      901 ggtctcgcgg aagcggcgct cgaggttggt gatgacgcct tcgaacggcc gtttggtctc
      961 gtaggcgcgc atgccgtcgt cgtaggagaa gcggatctcg gtttcgccgg agccgtagag
     1021 gatcgcgtcc tgcgtcttct tcggcaggtc cttccacttg gcctcaagcg tgaagcggta
     1081 gtgcttgccc agggcgagca gcgtctgcac gtagtagggc gagctcgatt tcgcccacgg
     1141 cgcaatggcg ccacggcgca aggtgcgttc cttgtcggga atgaccagct cggggtcgat
     1201 gtgctgctcg acgccgagcc cgccgcattt cgggcaggcg ccgaacgggt tgttgaacga
     1261 gaacagccgc ggctcgattt ccgggatggt gaagccggac accgggcagg cgaatttttc
     1321 cgagaaggtg aggcggttcg cgtcagaggc ggcggccgcg gcaagcttgg ttcgtttctc
     1381 gccctcccct ggagggggag ggttggatcg cgggacgcga tccggggtgg ggtgatcggc
     1441 gccgccgcgc acccccaccc ggcgagcttc gctcgccgac ctcccccctg cagggggagg
     1501 tgaaggagcg gcagagtccg caaactccgc taccgcgagg ccgtcggcga gcttgagcgc
     1561 ctgctcgagc gaatccgcga gccgcgtgga gatgtccggg cgcaccacga tgcggtcgac
     1621 cacgacatcg atgtcgtgct ggaatttctt gtcgagcgcc ggcgcttgcg cgatctcgta
     1681 gaacgcgccg tcgatcttga cgcgctggta gcccttcttg gcgaagtcgg cgagctcctt
     1741 gcgatactcg cccttgcgtc cgcgcgccac gggcgcgagc agatagagcc gcgtgccttc
     1801 gggcaaagcg agaatgcggt cgaccatctg cgagacggtc tggctctcga tcggcaggcc
     1861 ggtcgccggc gagtagggca cgccgacgcg cgcccagaga agccgcatgt aatcgtggat
     1921 ctcggtgacg gtgccgacgg tcgagcgtgg attgcgcgag gtggtcttct gctcgatgga
     1981 gatggcgggc gagaggccgt cgatctggtc gacgtccggc ttctgcatca tctccaggaa
     2041 ctggcgcgca taggccgaaa gactctcgac gtagcggcgc tggccctcgg cgtagatggt
     2101 gtcgaaggcg agcgaggatt tgccggagcc ggaaaggccg gtgaagacga cgagccggtc
     2161 gcgcggaatg tcgaggtcga tgttcttgag attgtgctcg cgcgcgccgc ggatcgcgat
     2221 cacgcggcga tcgcggcggc cgggaccttt gtcgtctctt ctgc
//
LOCUS       DATMQB010000437         2392 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1485565, whole genome shotgun sequence.
ACCESSION   DATMQB010000437 DATMQB010000000
VERSION     DATMQB010000437.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2392)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2392)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2392
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1485565"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..342)
                     /locus_tag="VNY79_12545"
     CDS             complement(<1..342)
                     /locus_tag="VNY79_12545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007755291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine methyltransferase"
                     /protein_id="HWX73323.1"
                     /translation="MLLPTSLVGSYPQPEWLIDRARLSTQVPRVRADDLWRVAPEHLE
                     AAQDDATILAIRDQERAGLDIITDGEQRRESYSNRFATALDGVDVERPGTTLSRTGKP
                     IAVPRVVGPIRR"
     gene            complement(410..1741)
                     /locus_tag="VNY79_12550"
     CDS             complement(410..1741)
                     /locus_tag="VNY79_12550"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HWX73324.1"
                     /translation="MGHHLAWPLVRRDVAGRGNVGRGATLRNISGGIAAALVVGALAV
                     APLPASAQSGEPIKIGFSMALTGPLAPNGKQALLGAKIWEEEINAKGGLLGRKVQLIN
                     YDDQSNPATVPGIYTKLLDVDKVDLVVGPYATNMNAPAMPVVMQKGKTYISLFALGLN
                     SEFHYAKYFSMLPSGPTPKQSFSDGFFQIAAAQNPKPQTVALTAEDAEFARNACEGAR
                     DSAKEYGFKIVYDKTYPPGTTDFSPIIRALQAANADLVIACSYPLSSVGILQSANELN
                     FTPKMFGGAMVGLQATVFKDRLKSKLNGIINYETWVPSPNLMAPAEAFFKTYQARAKS
                     EGVDPLGYYLGGWGYAYLQVLGEAVEGAKSINDDKLADYLHNNEFKTIMGDFRFGKDG
                     EWTKSAMLTVQYHGVTEAANLETWRGMDYQTVLTPADQKTGDVIYPYAKAK"
     gene            2133..>2392
                     /locus_tag="VNY79_12555"
     CDS             2133..>2392
                     /locus_tag="VNY79_12555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012453680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein B"
                     /protein_id="HWX73325.1"
                     /translation="MGRLTAIVLGAAAGGGFPQWNCRCPVCRLAWAGDTRVEPLTQAS
                     LAVSTDGERWVLLNASPDLRAQVQATPALQPRAGTRDTPIAAV"
BASE COUNT          376 a          777 c          785 g          454 t
ORIGIN      
        1 ccggcggatc gggccgacca cgcgcggcac cgcaatgggc ttgccggtcc ggctcagcgt
       61 cgtacccggc cgttccacgt cgacgccgtc gagcgccgtg gcgaaacggt tggagtagct
      121 ttcacgccgc tgctcgccgt cggtgatgat gtcaagcccg gcgcgctcct ggtcgcggat
      181 cgcgaggatg gtggcgtcgt cctgcgcggc ttcgagatgc tcgggcgcaa cgcgccagag
      241 atcgtcggcg cgcacgcgcg gcacctgcgt cgacagcctc gcgcggtcga tcagccactc
      301 gggctgcggg taggagccga cgagggaggt tggcagcagc ataggctttc aggtgtgcgc
      361 cgggcgcgcc ggcaagagcc gacgccccgg aatggcgtca atccaaaagc tacttcgcct
      421 tcgcgtacgg atagatgacg tcgccggtct tctgatcggc cggggtcagc accgtctgat
      481 agtccatgcc ccgccaggtc tcgaggttcg cggcttcggt gacgccgtga tactgcaccg
      541 tcagcatggc ggacttggtc cactcgccgt ccttgccgaa gcggaagtcg cccatgatgg
      601 tcttgaactc gttgttgtgc aggtagtcgg cgagcttgtc gtcgttgatg cttttcgcgc
      661 cctcgaccgc ttcgccgagc acctgcagat aggcgtagcc ccagccgccg agatagtagc
      721 cgagcggatc gacgccttcg gacttcgccc gcgcctggta ggtcttgaag aacgcctcgg
      781 ccggcgccat caggttcggc gacggcaccc aggtctcgta gttgatgatg ccgttgagct
      841 tcgatttcag ccggtccttg aacaccgtgg cctgcaggcc gaccatggcg ccgccgaaca
      901 ttttcggcgt gaagttgagc tcgttcgccg actgcaggat gccgaccgag ctcagcggat
      961 aggagcacgc aatcacgagg tcggcgttgg cggcctgcag cgcgcgaatg atcggcgaga
     1021 agtcggtcgt gcccggcgga taggtcttgt cgtagacgat cttgaagccg tactccttgg
     1081 cgctgtcgcg cgcgccctcg caggcgttgc gcgcgaactc ggcatcctcg gcggtgagcg
     1141 cgacggtctg cggcttggga ttctgcgccg ccgcgatctg gaagaagccg tcgctgaagg
     1201 attgcttcgg cgtcgggccg gatggcagca tcgagaaata cttcgcatag tggaattcgc
     1261 tgttcaaccc gagcgcgaac aggctgatgt aggtcttgcc cttctgcatg acgaccggca
     1321 tcgccggcgc gttcatgttg gtcgcatagg gcccgaccac gagatcgacc ttatcgacat
     1381 cgaggagctt ggtgtagatt cccggcaccg tcgccgggtt ggattggtcg tcatagttga
     1441 tgagctggac cttgcggccg agcaggccgc ccttggcgtt gatttcctct tcccagattt
     1501 tcgccccgag cagcgcctgc ttgccgttgg gagccagcgg cccggtgagc gccatgctga
     1561 agccgatctt gatcggctcg ccgctttgcg ccgaagccgg aagcggcgca acggcaagag
     1621 cgcctacgac cagagcggcg gcgatcccgc cgctgatgtt gcgcagagta gccccgcgcc
     1681 cgacattgcc gcgcccagcg acgtcgcgcc gcacgagcgg ccatgcaagg tgatgaccca
     1741 taaagttcct ccctctacgg cttttcgttc gcgcttcccg gcgggccggg ttcgcccctg
     1801 acgcgacagt ctccccacaa tgccccggtt cactcggcgt gaaaagaccg cgcggcaatc
     1861 ggtccgcgcg ctgcgggcca tggcccgtcg caaggaggcc cggcaaacgt cgggcaaaac
     1921 tcctattgcc ggcccgttct tttcccctta ctttgcagtc atgcgaaggc ggaactggcc
     1981 tagccggtgg gacctcgcgc ataaagagaa ggaaacgacc atgtcctgga caactcctac
     2041 cctcgttgag atctgcatcg gcctcgaaat caacggctat cttccggccg agttctgatc
     2101 tgcatttctg tatcttccga cgatccccgt gaatggggcg tctaaccgcc atcgtgctcg
     2161 gtgcagcggc gggtggcggg tttccacagt ggaattgtcg gtgtccggtg tgtcggctcg
     2221 cttgggcggg cgacacacgg gtcgagccgc tcacacaggc cagcctcgcc gtctccactg
     2281 acggcgagcg ctgggtcctc ctcaatgctt cgcccgatct gcgcgcccag gtgcaggcga
     2341 cgcctgcgtt gcagccgcgc gccggcacac gcgacacgcc gatcgccgcc gt
//
LOCUS       DATMQB010000438         6858 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1485863, whole genome shotgun sequence.
ACCESSION   DATMQB010000438 DATMQB010000000
VERSION     DATMQB010000438.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6858)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6858)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6858
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1485863"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..468
                     /locus_tag="VNY79_12560"
     CDS             <1..468
                     /locus_tag="VNY79_12560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018389111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoesterase"
                     /protein_id="HWX73326.1"
                     /translation="VIALGDSFHDGGGPLRMTAPDRAALTALQRGRDWLWITGNHDPH
                     PVDGVGGEFAAALALGPLTLRHEPSPEAGDGEIAGHLHPVARVAQRGRVVSRRCFAGD
                     GRRLVMPAFGAYAGGLNVRDRAITALFGTLAFTAHMLGARRLFAVAAERCLPD"
     gene            complement(506..1279)
                     /locus_tag="VNY79_12565"
     CDS             complement(506..1279)
                     /locus_tag="VNY79_12565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008139860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02186 family protein"
                     /protein_id="HWX73327.1"
                     /translation="MRRPFALMVALASVLAAGPAAAERLIASLTNHRVMITSSYAGVE
                     LVLFGSVERDAASVERKGPYDLVATITGPRESLRTRHKQRVLGIWVNTAARTFVDPPS
                     YLAVLATRPLDAITNAANQRRLRIGIANTPLPELIHNDIGEVANDPFRAALVRLMQER
                     GLYGEEPNAVTFLTPTLFRAAIPLPAQVPTGGYTVDVKLFADGNLVAQSNSAFEIVKV
                     GFEQFVANAAREHGLLYGLATTMMALATGWIASIAFRRD"
     gene            complement(1276..2202)
                     /locus_tag="VNY79_12570"
     CDS             complement(1276..2202)
                     /locus_tag="VNY79_12570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HWX73328.1"
                     /translation="MQIFLPIADIPVNVFLLFAMGLAVGFISGMFGIGGGFLMTPLLI
                     FIGVQPAVAVASVTTHVAASSFSGAIAYWRRNALDSTLALTLLGGGIFGSTGGVALFT
                     WLRALDQLDLVIGLSYVMLLGIVGVLMIAESVRAINRSRQGKPAELRRPGSHVWFHGL
                     PLKLRFKRSKVYVSAIPVLAIGFIIGFIGAIMGIGGGFLLVPMLIYLVRVPTATVIGT
                     SMVLTFVTMATATVLHAATNHLVDAVLALILMVGGVIGAQFGVHAGQRIRGEWLRLFL
                     GLLVLSVGLRFASELVLTPEDLYSIRLMRSGP"
     gene            complement(2418..3974)
                     /locus_tag="VNY79_12575"
     CDS             complement(2418..3974)
                     /locus_tag="VNY79_12575"
                     /inference="COORDINATES: protein motif:HMM:NF019843.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HWX73329.1"
                     /translation="MSTNARVAAPPKPVPREPVHVEPVAPPRVAAARPPIDPNLPPDH
                     PLEPGSAAGRSRPMPAAERTPAAQAAATGSTTSKPPVIPDPGGRPDYIAAARRAAQVA
                     AAASPRARATAATAAKGPPLPGHLTQRLRKLIVAAAVVVIIVGGVHIALRLFEDAGTG
                     TSPEPRPESENPPPPAAAAAPATAPTAPAASTQGPKVIQLPVPGASPAPAKEPPASAP
                     PAPVPSYLAPGTGTKPRRQSLNDDPPLPPVPDLTSVLQLAPVPPNAAPAPAPPPVTAP
                     AAAPLTDKLPATIGGPALRAAALAGDAAAEYEVGVRFADGRGVAQNGEEAARWLDHAA
                     KGGFAPAMFRLGALYEKGAGVKKDLAAARDHYRAAAEKGHGKAMHNLAVLYAEGVDGA
                     ADYRAAAEWFRKGADRGIADSQYNLGILYARGIGVEHNFAEAYKWFSLAAKEGDKDAA
                     KKRDDIAAHLDQQSLAAARSAIEQWTPLPQPADEAPKGAWDAPASPAPPAKSKPRNAK
                     TSVPEAAKLN"
     gene            complement(4076..4753)
                     /locus_tag="VNY79_12580"
     CDS             complement(4076..4753)
                     /locus_tag="VNY79_12580"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73330.1"
                     /translation="MKALAQKVDVIAAKEDPAALHQLETAIAALRSIVSHVASNDTLT
                     KVAEEVRALSAKVDGVANNAASGDALSALESRIDTLATALNASTEAGHAVPRELEKLL
                     AGLIEKLEWVQLTHTDHAALAHLEDRIAMLVKRLDASDARLGHLDGIERGLADLLVHI
                     EQMRGANGKGEAGVKAKSATGRHSPARPCGNQTIGTPHPGFARSLSRHRRARHRPPRH
                     DRKRPAR"
     gene            complement(4750..5691)
                     /locus_tag="VNY79_12585"
     CDS             complement(4750..5691)
                     /locus_tag="VNY79_12585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73331.1"
                     /translation="MKSGAPWKLKGRGPEGREIARAAARRSGTSVGEWLNRVIAAADD
                     EDEAQPPPRDVDHEPRRRRWRQGFRYQGRHNGRGSEANRSGGDSDAEEEAPARRQGGP
                     YREEPPREPADQRRRDRVRREESAAGRASRGDQNVSTHQDVSIDQAVAEIMARQRALD
                     GAAPGEREPAERQQPPAPFAHPGEGRASLRESSPTAPENTAGAAPDLGGLDRQLRQIT
                     ARIEALRPASELETAIKALRTDLTDIGRSLTEALPRRAVESLEIEIKALGQRIDHCRA
                     SGVDSTALAGLERGLQDVREALRGLTPPRAWSASMRR"
     gene            6137..6496
                     /locus_tag="VNY79_12590"
     CDS             6137..6496
                     /locus_tag="VNY79_12590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013164917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HWX73332.1"
                     /translation="MTIRDVAHQFGMTPRALRFYEAKRLIAPQRRGATRLYRRSDCER
                     LALILAGRRLGFTLAEIRDLLGRPDDTTLHLTREQCVAQINALEQQKRGLEMAIAELR
                     QIYSSFYRKLLEQAEAG"
     gene            6730..>6858
                     /locus_tag="VNY79_12595"
     CDS             6730..>6858
                     /locus_tag="VNY79_12595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018483922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase N-terminal
                     domain-containing protein"
                     /protein_id="HWX73333.1"
                     /translation="MPTYKAPVDDVMFLLSDVFHIDRYNNLPGFADATPDLLEAVLA"
BASE COUNT         1043 a         2331 c         2393 g         1091 t
ORIGIN      
        1 gtgatcgcac tgggcgacag cttccacgat ggcggcgggc cgttgcgcat gaccgcgcct
       61 gaccgcgcgg cgctcaccgc gctgcagcgc ggccgcgatt ggctgtggat taccggcaat
      121 catgatcccc acccggtgga cggcgtcggc ggggaattcg ccgcggcgct ggcgctcggc
      181 ccgctgaccc ttcgccacga gccttcgccc gaagccggcg acggtgagat cgccggccac
      241 ctgcatccgg tcgcgcgtgt cgcccaacgt gggcgcgtgg tcagccggcg ctgcttcgcc
      301 ggcgatggca ggcggctcgt catgcccgcc ttcggcgcct atgccggcgg gctcaacgtc
      361 cgcgaccggg cgatcacggc tttgttcggc acgctcgcct tcaccgccca catgctcggc
      421 gcgcgccgcc tctttgcggt cgccgcggaa aggtgcctcc ccgactgatc ccctttccct
      481 gcccgcgcac gcgcccggaa aaacatcaat cacgccggaa ggcgatgctc gcgatccagc
      541 cggtggcgag cgccatcatg gtggtcgcaa gcccgtagag caggccatgc tcgcgcgccg
      601 cgttggcgac gaactgttcg aagccgactt tgacgatctc gaacgccgag ttcgactgcg
      661 cgaccagatt gccgtcggcg aacagcttga cgtccacagt gtagcctccg gtcggcacct
      721 gcgccgggag cgggatggcg gcacggaaca gcgtcggcgt gagaaacgtc acggcgttcg
      781 gctcttcgcc gtagaggccg cgctcctgca tcagccgcac cagagccgcg cggaacgggt
      841 cgttggccac ctcgccgata tcgttgtgga tcagttcggg cagcggcgta ttggcaatgc
      901 cgatccgcag ccggcgctgg ttcgcggcgt tggtgatggc atcgagcggt cgggtcgcca
      961 gcacggcgag ataggagggc ggatcgacga acgtgcgcgc cgccgtgttg acccagatgc
     1021 cgagcacgcg ctgcttgtgc cgggtgcgca gtgactcccg cggtccggtg atcgtggcga
     1081 cgaggtcgta cggccccttg cgctcgacgc tcgcggcgtc gcgctcgacc gaaccgaaca
     1141 gcaccaactc gacgccggcg tagctcgacg tgatcatcac ccggtgattg gtcagcgagg
     1201 cgatcagtcg ctcggccgcg gccgggccgg cggcgagcac gctcgcgagt gcgaccataa
     1261 gggcgaacgg gcgtctcatg gcccgctccg catgagccgg atcgagtaca ggtcctccgg
     1321 cgtcagcacg agctcggacg cgaaacgcag gccgaccgaa agaacgagca gcccgagaaa
     1381 aagccgcagc cactcgccgc ggatgcgctg cccggcatgc acaccgaatt gcgcgccgat
     1441 cacgccgccg accatcagga tgagcgcgag cacggcgtcg acgaggtggt tggtcgccgc
     1501 atgcagcacg gtggccgtcg ccatggtgac gaaggtcagg accatggagg tgccgatcac
     1561 ggtcgcggtc ggtacccgca ccaggtagat cagcatcggc acgagcagaa acccgccgcc
     1621 gatgcccatg atcgcgccga tgaaaccgat gatgaagccg atcgccagca ccgggatcgc
     1681 cgagacgtag accttcgagc gcttgaaccg cagcttcaac ggcaacccgt gaaaccagac
     1741 atgactgccc gggcggcgca attcggcggg cttgccctgg cggctgcggt tgatggcgcg
     1801 cacgctctcg gcgatcatca acacgccgac gatgccgaga agcatcacgt aggacaggcc
     1861 gatgacgagg tcgagctgat cgagcgcgcg cagccaggtg aacagcgcga ctccgcccgt
     1921 gctcccgaaa ataccgccgc cgagcagcgt cagcgccagc gtgctgtcga gtgcgttgcg
     1981 tcgccaatag gcgatcgcgc ccgagaagga agaggccgcc acatgcgtgg tgacgctggc
     2041 gaccgcgacg gccggctgca cgccgatgaa gatcaacagc ggcgtcatga ggaatccgcc
     2101 gccaattccg aacatgccgg agatgaaccc gaccgcaagc cccatcgcga acaacagaaa
     2161 gacgttgacg ggaatgtcgg cgatgggaag gaagatttgc acggatgaac ggcccggcgc
     2221 gcggctgcgc gatcgaggct cttctactcg cgcgccggct cgcggcatac catccgcacc
     2281 ggggagcgcg cagatttgat cgtgcctggg ttacttccca gccgggccac gaggaactcg
     2341 acccataccc gacccgccgc tgatgacgtg ggtgcagggc cggagacggc cgccgcggaa
     2401 cgccgcgcga atgatcgtca gttgagcttg gcggcttcgg gcacggacgt cttggcgttg
     2461 cgcggctttg actttgccgg cggcgcagga ctggcggggg cgtcccatgc gcccttcggc
     2521 gcctcatccg ccggctgcgg cagcggcgtc cattgctcga tcgcggaacg ggcggcggcg
     2581 agcgattgct gatcgagatg agcggcgata tcgtcgcgct tcttggccgc gtccttgtcg
     2641 ccttctttcg ccgcaagcga gaaccacttg taggcttcgg cgaaattgtg ctcgaccccg
     2701 atgccgcggg catagaggat gccgagattg tactggctgt cggcgatgcc gcgatcggcg
     2761 cctttgcgaa accactcggc agcggcacgg tagtctgccg caccgtcgac gccttcggcg
     2821 tagaggacag cgagattgtg catggccttg ccgtggccct tttcggcggc ggcgcgatag
     2881 tgatcacggg ctgcggcgag gtctttcttc acgccggcgc ctttttcgta gagggccccg
     2941 aggcggaaca tcgccggcgc aaacccgcct ttggcagcgt ggtccagcca gcgcgcggcc
     3001 tcttcgccgt tctgcgcaac gccgcggccg tcggcaaacc gcacgccaac ttcgtattcg
     3061 gccgcggcat cgccggcgag tgccgctgcg cgcaacgcgg gaccgccgat cgtcgccggc
     3121 agcttatcgg tgagcggagc ggccgccggc gcggtcacag gcggcggcgc tggtgccggc
     3181 gcggcattcg gcggcaccgg cgcaagctgc agcacactgg taaggtccgg aactggaggt
     3241 agtggcgggt catcgttcag tgattgccgc cggggcttgg tgccggttcc cggcgccaaa
     3301 taggacggca ccggcgccgg cggtgcgctc gccggcggct ccttggcggg cgcagggctc
     3361 gcgccgggaa ccggaagctg gatcaccttc gggccctgcg tcgacgcggc cggcgcggtg
     3421 ggagcagtcg ccggcgccgc cgcagccgcc gggggcggcg gattctctga ctcgggccgc
     3481 ggctccgggg atgtaccggt gccggcgtcc tcgaacagcc gcaaggcgat gtgcacaccc
     3541 ccgacaatga tgactacgac cgccgcggcc acgatcaact tgcgcagacg ctgcgtcaga
     3601 tggccgggta gcggtggacc cttggcggcg gtcgcggcgg tcgcccgggc gcgcggcgaa
     3661 gccgcggcgg cgacctgcgc ggcgcggcgt gcggcggcga tgtagtccgg tctgccgcca
     3721 ggatcgggga taaccggcgg cttggaggtc gtggagccgg tcgcggccgc ctgcgcggcg
     3781 ggggtccgct ccgccgccgg catcgggcgc gagcgacccg ccgcggagcc gggttcgagc
     3841 ggatgatcgg gaggcaagtt cggatcgatc ggcggccgcg ccgcggcgac gcgaggcggc
     3901 gcgacgggct cgacgtgtac cggctccctc gggaccggct tgggcggagc ggcgacacgc
     3961 gcattcgtcg acactgccgg ctcgggttcg aacgggtttg gggggcgata gacgtggcgg
     4021 tgcggaaact ttctgcgttg ctgcaagcgc tggcgctgtc gcgggcgtcg ccttgtcacc
     4081 gcgcaggtcg ctttcgatca tggcgaggcg gtcgatgacg tgctcgacgg tgccttgaaa
     4141 ggcttcgagc gaatcctggg tgcggcgttc cgattgtttg atttccgcaa ggtcgcgctg
     4201 gactatgtcg cccggttgcg gatttcgcct tgaccccggc ctcgcctttg ccgttggcgc
     4261 cgcgcatctg ctcgatatgc acgagcagat cggcgagccc gcgctcgatg ccgtcgaggt
     4321 ggccgaggcg ggcgtcggaa gcgtctagcc gcttgaccag catggcgatg cggtcctcga
     4381 gatgggcgag cgcggcgtgg tcggtgtgcg tgagctgcac ccattcgagc ttctcgatca
     4441 gcccggcgag cagcttttcc agttcgcgag gcacggcgtg gccggcctcc gtcgaggcat
     4501 tcagcgccgt cgccagagtg tcgatgcggc tctcgagcgc tgagagcgcg tcgccgctcg
     4561 ccgcattgtt ggcaaccccg tcgaccttgg cggaaagcgc gcgcacttct tccgccacct
     4621 tggtcagggt gtcgttggaa gcgacatggg agacgatgct gcgcaaggcg gcgatcgccg
     4681 tctccagctg gtgcagcgcc gccggatcct ccttggcggc gatcacgtcc accttctggg
     4741 ccagcgcctt caccgccgca tcgacgccga ccaggctctc ggcggggtga gcccgcgcaa
     4801 cgcttcccgt acgtcctgga gtccacgctc gagaccggcg agcgccgtgg agtccacgcc
     4861 tgacgcgcgg cagtgatcga tgcgctgccc cagcgccttg atttcgatct cgagcgactc
     4921 gaccgcgcgc cgcggcagcg cttcggtcag cgagcggccg atgtcggtga gatcggtgcg
     4981 cagggccttg atcgccgtct cgagttcgct tgccggccgc agcgcctcga tgcgcgccgt
     5041 gatctgccgc aattgccggt cgaggccacc caggtcgggt gccgcacccg cggtattctc
     5101 aggcgcagtc ggcgagctct cgcgcagcga ggcgcggcct tcgcctggat gcgcgaaggg
     5161 cgccggcggt tgctgccgct cggcgggctc gcgttcgccg ggagccgcgc cgtccagcgc
     5221 gcgctgccgc gccatgattt cggccaccgc ctgatcgatc gacacgtcct gatgggtcga
     5281 cacgttctgg tcgccccgcg acgcgcgacc ggcagcgctt tcctcacggc ggacgcggtc
     5341 gcgacggcgc tgatcggcag gctcgcgcgg cggctcctcg cgataaggcc cgccttggcg
     5401 ccgggccggc gcttcctcct cggcgtcgct atcaccgccg ctccggttcg cctccgaacc
     5461 gcggccattg tgtcgaccct ggtagcgaaa accttgccgc caccgccgcc gtcgcggctc
     5521 gtgatcgaca tcgcgcggcg ggggctgcgc ctcatcctca tcgtcggccg ccgcgatcac
     5581 gcggttgagc cattcgccga cggatgtgcc cgaccggcgg gccgcagcgc gcgcaatctc
     5641 gcgcccttcc ggaccgcgtc ctttgagctt ccacggggcg cccgatttca ttcgcgtcca
     5701 acccacatcg tgaaaagcag gatgtgcacc ctgtttcgag ccgacgttcg ctaaacagac
     5761 aacgcggagg gcgcggttct ctgtccgcgg atcgactttt ccggattacg gtaaacaagc
     5821 cgttaagggc ccgtgctgcc ggtcaccgct cgttcaccat gtggggtggc cggctgtgat
     5881 gcgggcatca ccgacggccg gcgaagccgg cgggcgctcc gggtgcaaaa gttcccgtaa
     5941 ccgttaccgt tacgggtaac gcctttcccg aatgccaggc gccgtgagaa gttcgctgtc
     6001 acgcgacatc attgagtggc ggcgactcat gacgcggaac gcgggcatcc ctgcggcgga
     6061 tgcgacggcg ggcattgcta ttcgccaata ccccggttcg gccacaggcg cggccggggc
     6121 atgcgatgac tcgcccatga cgatccggga cgtggcgcac cagttcggta tgacaccgcg
     6181 ggcgttgcgc ttctacgagg cgaagcggct catcgcgccg cagcgccgcg gcgcaacacg
     6241 gctttaccgc cgcagcgact gcgaacgcct ggcgttgatc ctcgccggcc ggcgactcgg
     6301 cttcacgctc gccgagatca gggacctgct cggccgcccc gacgacacga cgctccacct
     6361 cacccgcgaa caatgcgtcg cccagatcaa tgcgctcgag cagcagaagc gcggcctcga
     6421 gatggcgatc gccgaactgc ggcaaatcta ctcgtcattc tacaggaagc tgctcgagca
     6481 ggctgaagca ggctgacggg gctttctcgc aagcaagcga gcccgcgacc tgcgcgcatc
     6541 atttgcgagc cgagcgaagc gtctcatcag aaaagcgcgg ccgggattgc accggtgctt
     6601 tcgcccggcg catgacggcc gcctccgcat tccgcgccat ttcacgtggc attgacgcag
     6661 atcggttaca cgataccttt ggccggtccg gccgacgggc aggcgggaca ctgcgccgag
     6721 gagaacgtca tgccgaccta caaggccccc gttgacgacg tgatgttcct cttgagcgac
     6781 gtgtttcaca tcgatcgcta caacaacctg cccggctttg ccgacgccac gccggatctc
     6841 ctcgaggcgg tgctcgcc
//
LOCUS       DATMQB010000439        18471 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_860040, whole genome shotgun sequence.
ACCESSION   DATMQB010000439 DATMQB010000000
VERSION     DATMQB010000439.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 18471)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18471)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18471
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_860040"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1048
                     /locus_tag="VNY79_12600"
     CDS             <1..1048
                     /locus_tag="VNY79_12600"
                     /inference="COORDINATES: protein motif:HMM:NF014542.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GTP-binding protein"
                     /protein_id="HWX73334.1"
                     /translation="MANTAVVINEFGEIGLDHLLAARSDDTIMVLENGCLCCTVFGDL
                     VTTLNNLYHAREDRAVPRFDHVVIETSGLADPSPLIQAFLSDPTLAGLYRLGTVVATV
                     DAVNGPATLDKHIESVRQAALADRILITKLDLLGAAEARGAEVALTARLRRLNPAAKI
                     SRLDDPALDIGGLLRAAGLDPGGAGAAARAWLNAAAYQQRDGGQHPAGEGHEHCDDHA
                     HPDGHAHHDHHGLHDRDIASFCFIREQPIAREALRLLLDALQQNLGPNLLRVKGLVHV
                     AEEPDRPAVIQGAQHLLHNLSWLERWPDEDRRSKLVFITQGFDRAEVEDMIAVLDRVA
                     TRTAAARARAQSRA"
     gene            1045..1191
                     /locus_tag="VNY79_12605"
     CDS             1045..1191
                     /locus_tag="VNY79_12605"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73335.1"
                     /translation="MNATMAGNLRTLLRAHAAGCSILIRLLVGLVVFLPEGLLSRDRR
                     QPPV"
     gene            1207..1692
                     /locus_tag="VNY79_12610"
     CDS             1207..1692
                     /locus_tag="VNY79_12610"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73336.1"
                     /translation="MPRARTRLLLLAATFLGGILAGTAVDRVIVGGPAWHELGAAAWL
                     EYSRRADLGTGLVAYPIEGIGAALLAIAAAVSNYFDGNRRRGTVLPLYCAAAFSIVGL
                     LLTVKAAPIMLSLAAPQDAAAAQRAFDAFFVSGLYLRGAAETLAFAALVWALSDLYRI
                     E"
     gene            1791..2993
                     /locus_tag="VNY79_12615"
     CDS             1791..2993
                     /locus_tag="VNY79_12615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012384176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HWX73337.1"
                     /translation="MTERPIRRYFAGLSRTTFLLAFASLFSDISTEMLYPVLPVFLTQ
                     TLGATGSIVGLVDGLAQAAQNIIQGLSGTLSDRLQRRKPVALAGYFLAAISKPLMGLA
                     TVWQVVFGARLLDRLGAGARSAPRDALIAASVAEAHRGRAFGLEGVGDNAGAFLGPVV
                     TLLLLYALHFDIRSVFYLAVVPGLLAFALVVLVKEPRAAVAAETKIDVSPRQFPPAYW
                     KYLGVIALFALGNSSNAFLILRTQDISASLENTILIYAAFNLVAALISYPAGSLTDRW
                     GGRNVLLAAFGIFLIGYLGFALTQNVTLIAGLFVFYGLYQGIFRTAGKALASSFVSDR
                     LRASGIGWYNTTVGLLQFVASVAAGLLWDRVGHAAVFYYGAFFAAVGMVALVLLIPSR
                     RGQRHGAA"
     gene            3000..3650
                     /locus_tag="VNY79_12620"
     CDS             3000..3650
                     /locus_tag="VNY79_12620"
                     /inference="COORDINATES: protein motif:HMM:TIGR04415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73338.1"
                     /translation="MRPAGCHAADTNRLATVLSGGTDLNEAILKGGNTTVSAAGFDSG
                     ATVSSGGKLVVASGGTEVDATVRAGGSAVISSGGLAELTGSATTSGVTLLSGAVLGVG
                     SGYTLTGFAVSKGITLDVLSGGTANSATVKAGGVEIITGGGTEHGATVSSGGIFVASA
                     APASAATPSSAGPWSNSAPASSIRSVSAPTHRAYRCRSLSCPAARSAAARSHAAMW"
     gene            3584..4804
                     /locus_tag="VNY79_12625"
     CDS             3584..4804
                     /locus_tag="VNY79_12625"
                     /inference="COORDINATES: protein motif:HMM:NF027494.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73339.1"
                     /translation="MQVIVLSGGTLSGGEVPRGYVVTVRSGGIASGLAVDSGASLIVS
                     AGGTDINATVSGGGKLIVSSGGVADPTIILAGGTEIVSAHGTDDGAHISGGTHLVFGL
                     ASGGTVFAGAQVVGSSGTAAATVVSGGTEIVSARGIASGASLFGGTELVASGGTDIGA
                     TVDGGGELDVLKGGRASGTLFTSGGLETVSAGGLVVSAKVQNIGQNSAGLGLRVLGTA
                     SGSLVGSNGQGVVSSGGVDIGATVLSGGFLTIHSGGLSISATLSGNTAGALGAEFVRS
                     GGRTSHAVIDSGGFLSVSAGGLVISTIVNSTGVGTSVGGLLLSGAAGGGAASATLVNS
                     GGQESIHFGGKDIGARSTAAATCSSSPAVSPAARRLSGWRSSPPAAPPWRTLSRVSAL
                     PAAAAPVWVCPALA"
     gene            4729..6075
                     /locus_tag="VNY79_12630"
     CDS             4729..6075
                     /locus_tag="VNY79_12630"
                     /inference="COORDINATES: protein motif:HMM:TIGR04415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73340.1"
                     /translation="MANIIQGVGATGGGGSGLGVSGFGLASGTVLKNGGEEGVFAGGT
                     DISATVSSGGGLFIHSGGIASGATIKAGGLGVVESGSVLSGTTTVTSGGTIEFIGTDA
                     SNNGLKLLSGATGELGSGAFLTDAKISKGITLVILSGGIASGGSILAGGLGILESGGQ
                     VTGDGSGSSLFIASGGTFEFASGTNGGSNIQPLSGATLEVGSGAAFPVNKIDAGITVK
                     VLSGAALTLSGATISTGALVETLSSGTIIVSGALADSGTLMASGIGSLVEIDSGAVVS
                     GGAVVVGNGLVDVLSGGSASVRFLSNGSGGLEIADTDTNPSTFSGTVSGFGGVNHTNH
                     KQFIDLVSVASAPNTISLSYVSAAANTSGTLFVSSGGVEVAAITMVGHYSAGNFHITA
                     GSGGTVEIVDPTVVNGGSVAPGPATRTFPGNGVDLPNIAFGAQTTLAYSQMPSARR"
     gene            6078..6230
                     /locus_tag="VNY79_12635"
     CDS             6078..6230
                     /locus_tag="VNY79_12635"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73341.1"
                     /translation="MSDGRHAAAIALLGNYIAGSFVAMADGHGGTLVMEAQTGQQPLL
                     THPPHQ"
     gene            complement(6276..6998)
                     /locus_tag="VNY79_12640"
     CDS             complement(6276..6998)
                     /locus_tag="VNY79_12640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018041912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0017004 - cytochrome complex assembly
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome c biogenesis protein CcdA"
                     /protein_id="HWX73342.1"
                     /translation="MTAGALALALIAGVLSVLSPCVLPILPVVLGAAASEHRWGPAVL
                     AIGLSVSFVAIGLFAATVGYSIGLDAEIFRRGAAALMVIAGTVLLVPRFQEQLALAGA
                     PLANWSDRHFAGTRGSGLAGQLSLGLLLGAVWSPCVGPTLGAASILAAQGRDLGAVAA
                     TMLAFGLGAGLPLAALGFLSRDVLARWRARLIAGGTRARAAFAVVLVAIGLLVLTGLD
                     KRIETFAVDHSPQWLTDVTTRF"
     gene            complement(7006..7398)
                     /locus_tag="VNY79_12645"
     CDS             complement(7006..7398)
                     /locus_tag="VNY79_12645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HWX73343.1"
                     /translation="MLSRRSVVLAAIAASTGLTAQALAFETKTFDAKSFAAAQKAGKP
                     ILVAIHASWCPTCKAQKPILSELTAKPEFKDLVYFVVDFDSQKDAVKYFGARAQSTLI
                     AFKGETETGRSAGDTERSSISALLHKTL"
     gene            7688..8875
                     /locus_tag="VNY79_12650"
     CDS             7688..8875
                     /locus_tag="VNY79_12650"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylacetate--CoA ligase"
                     /protein_id="HWX73344.1"
                     /translation="MSTETASGRAGTFMFDRDTEAMPRRALAALQASRLKDTLERAYA
                     LAHYRQKFDAAGVRPGDFKSLADIGRFPFTLKSDLRDNYPFGMFAVPRERLLRLHASS
                     GTTGKPTVVGYTAGDLDTWSDLMARSLACAGAAPGDIVHNAYGYGLFTGGLGVHYGAE
                     RLGCTVVPVSGGATERQVTLLADFGARVLCATPSYALNIAEVAVAMAVDLRGGPLRVG
                     VFGAEPWSEATRRDLEERLGIAAVDIYGLSEILGPGVACECHSAQAGLHGWEDHFLFE
                     VVDPETLQPLPIGESGELVITTLTREALPMVRYRTRDITRLNDEPCSCGRTHVRIMRV
                     TGRDDDMLIIRGVNVFPSQLEAAGRLPGAGAALSDRFDPRRRARRADGGGGGYARRAA
                     RGG"
     gene            8799..9017
                     /locus_tag="VNY79_12655"
     CDS             8799..9017
                     /locus_tag="VNY79_12655"
                     /inference="COORDINATES: protein motif:HMM:NF025888.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73345.1"
                     /translation="MTREGALDALTVEVEVTPDAPLAEGDRGPKARQVSAQIKSLIGV
                     TCDVVVKSSGEVPRSQGKAVRVRDERKK"
     gene            complement(9090..10298)
                     /locus_tag="VNY79_12660"
     CDS             complement(9090..10298)
                     /locus_tag="VNY79_12660"
                     /EC_number="2.7.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0008776 - acetate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006083 - acetate metabolic process
                     [Evidence IEA];
                     GO_process: GO:0006113 - fermentation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetate/propionate family kinase"
                     /protein_id="HWX73346.1"
                     /translation="METILVVNAGSSSVKFQIFAVGEAGEPRRLLWGQMDGIGVRPKL
                     RAKGEDGSSLVDKEFATNEVPDVAAAMSAVRDWLRETQKSTLVAVGHRVVHGGPDFDK
                     PVIVDEEVISRLESYVPLAPLHQPNNLAPIRLLLRTRSELPQVACFDTAFHRGHDSLA
                     DHFALPQHFYDEGIRRYGFHGLSYEYIAERLREIASAVAAGRVIVAHLGSGASMCAIA
                     DGRSVESTMGFTALDGLPMGTRPGQIDPGVLLYLIMERGMEPSAVRDLLYRESGLRGM
                     SGVSSDVRDLEASAAPAAAFAIEYFVYRIGLSAGMLAAALGGLDAFVFTAGIGENSPT
                     MRTRIAERLGWLGVSLDPAANAANKTVISRPGSRIKLYVVPTDEELAIARHTISLLSK
                     RPKVAARVAM"
     gene            complement(10305..10505)
                     /locus_tag="VNY79_12665"
                     /pseudo
     CDS             complement(10305..10505)
                     /locus_tag="VNY79_12665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601240.1"
                     /note="catalyzes the formation of acetyl phosphate from
                     acetyl-CoA and phosphate; can also act with other
                     short-chain acyl-CoAs; incomplete; partial in the middle
                     of a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
     gene            complement(10691..11494)
                     /gene="ppk2"
                     /locus_tag="VNY79_12670"
     CDS             complement(10691..11494)
                     /gene="ppk2"
                     /locus_tag="VNY79_12670"
                     /EC_number="2.7.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008976 - polyphosphate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0006793 - phosphorus metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="polyphosphate kinase 2"
                     /protein_id="HWX73347.1"
                     /translation="MTKKQPIADKMKRKAYEKELRKLQTKLCRLQAWIKRKGLRVIII
                     FEGRDAAGKGGTIKAIAERVSPRVFRVVALPSPTEREKSQMFMQRYITQFPAGGEAVV
                     FDRSWYNRAGVEYVMGFATEKEHERFLDLCPEIEKHIVDGGITLIKIWLEVGMEEQER
                     RFLARISDPLRQWKLSPMDLESYKRWYEYSKARDLMLKRTDTKHAPWHIVRTDDKRRG
                     RLNCISHILSSIPHGKPETPSVELPKRMVKNRYDDHAALRGRRFVAEKY"
     gene            complement(11553..14759)
                     /locus_tag="VNY79_12675"
     CDS             complement(11553..14759)
                     /locus_tag="VNY79_12675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0015562 - efflux transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0042908 - xenobiotic transport [Evidence
                     IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux RND transporter permease
                     subunit"
                     /protein_id="HWX73348.1"
                     /translation="MLSSLFVDRPRLAIVIAIVTTIAGLLALYAIPFAQYPDIVPPQV
                     SVTTAYPGANSTVVESTVAQVIEAQVVGVDKMIYMKSTSGDDGSYTLTASFELGTNPD
                     INTVNVNNRVQVAFPSLPPEVQRQGVTVKKKSSALLGVIAVYSPKHTHDPLFLSNYVT
                     INLLDRIKSTPGVGDAALWGPQDYAMRAWVRTDQLTGLNLTTADVINAIQTQNIQAAV
                     GRVGARPISDDQQLQLNIQTKGRLNSVEDFENIVIRTNPDGSVLRLRDIARVALGAAN
                     LDRDTRLNGGPAAAIAIYQTPGANAINTLKEVRGRIEEAQKRFPEDMAWKITYDPTVF
                     VKDTIHEVQKTLIEAFILVVIVVFLFLGSVRATLIPTLAVPVSLIGTFVALLAVGYSA
                     NTVSLLAVVLAIGIVVDDAIVVVENVERVMEEHPELTAGEATKLAMAEITAPIIAITL
                     VLLSVFVPVAFIPGISGELFRQFAVTVAVSMLLSAINALTLSPALCAVFLRRHHGPRR
                     GVMGYVMRSIDRVRDAYGAAVARLVRFSIIGLAMVAVAMVATAGLAKITPTGFLPEDD
                     QGALFVVAQLPGGSSVARTTEVVQRAEAILKEEEAVGDVTSVIGLNFIDNYSQSNAAF
                     MVVTLKPFDERKDKSLGAAALIARLGQKFRQIQGGTVVPLAPPPILGLGTGGGFAYVL
                     EDLRGGDSKALDQALRGLMVAANQDPKLNRVFSTFSATNPSIYLDIDRDKAQILGVPL
                     SNVFQSLQASLGGYYINNMNLFGRTWQVQVQAEATDRSSIDDIYRINVRSKDGSMIPL
                     RSLAEVRIAVGPPALIRYNNLRAVTVQGSPAAGVSSGQALQAMDAVAAHTLPQGYGGE
                     WTDTAFQEKRAEGKTAIILGFAILFAYLFLVALYESWTIPIPVLLSVTIGIIGSFIGI
                     VMAGLTLDLYAQIGMVVLIGLAAKNGILIVEFAKEQREKGVPLLDAATEGARLRFRPV
                     MMTSFAFILGLLPLVVASGASQLARRDVGTPVFGGMILASFIGIFAIPPLYVSFQAIR
                     EKLRPSSRPHKPAPAEAADPPPAAAASPRHDHADVAAE"
     gene            complement(14764..15954)
                     /locus_tag="VNY79_12680"
     CDS             complement(14764..15954)
                     /locus_tag="VNY79_12680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012116322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HWX73349.1"
                     /translation="MTRNLFLLRQARSLILAGRRPFRRLSAKSRSLCGIVSILICAIV
                     PAGAQQPQQPSQSVGTVYAERKPIAKTLDFVGRIEARERVVVQARVKGYLEAVLFKEG
                     EFVKKGDALYQIEKGLFQAAVDDAQGALERAKAAKVLSTVELQRKEELLEKQAGTVAA
                     RDVALAGDEQAKGAVLSAQANLETAHINLGYTEIVSPIDGKISRTSITPGNVVGPESG
                     SLTLIVSQDPMYVTFPVSQRDLLQAQVSGRQSEIKDIKVKVRFANGSTYDQQGSINFI
                     DVSVNRATDTVIARATIANPAGTLIDGQLVSVTLEAGTPEEKVIVPQAALIADQEGIY
                     LFVVEDGKAAVRRVKPGGESGPNVVINEGLKGGEQVIVEGLQGVRPGLAVQARPAAKA
                     LERS"
     gene            16073..16558
                     /locus_tag="VNY79_12685"
     CDS             16073..16558
                     /locus_tag="VNY79_12685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011509442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73350.1"
                     /translation="MASTQTKAADPNAAGSLGELPTAKDLMQQVALKEAEKASAAMRE
                     RTAGETEKQALLEKLSKPSGVDDKERLARATAIIKRAAGNGLTEVEVGRFPKELFTDR
                     GRAINQMEPGWENTLTGLPKELLEFWREFLRPHGYKLKVQVVDFPGGIPGDIGMTLSW
                     S"
     gene            complement(16843..17142)
                     /locus_tag="VNY79_12690"
     CDS             complement(16843..17142)
                     /locus_tag="VNY79_12690"
                     /inference="COORDINATES: protein motif:HMM:NF018151.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeA/HdeB family chaperone"
                     /protein_id="HWX73351.1"
                     /translation="MLSRLIALALLGAFVGSSAAHAQVTVDVAKITCRQYLTGKITTP
                     RSVANWLSGYFHGERGDTTLDYGDLGANVGKVDAFCRKHHEMPLLEAARTVFGKR"
     gene            17392..17865
                     /locus_tag="VNY79_12695"
     CDS             17392..17865
                     /locus_tag="VNY79_12695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011086266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73352.1"
                     /translation="MTTPPHPAAAHNLPIFITAPGDTDVLMVVTALFLLVAVVTFGLV
                     FFRIHTLPERMAHGSHKLQFEIVAVLGLVALFTHMHGFWIAGLLLALIDIPDFPGWLG
                     RIARAVERIAGMKPDESPVEAPPGNAVASASAEHATKVPGQAQSRSAKDEELIHA"
     gene            17858..>18471
                     /locus_tag="VNY79_12700"
     CDS             17858..>18471
                     /locus_tag="VNY79_12700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin/lipoyl-binding protein"
                     /protein_id="HWX73353.1"
                     /translation="MLELLLCSALTILPDYLYRRFVQGKRFGREITLYSVWFELRWGI
                     TLCILLTILLITVIFYNHPSTSNVTLFFRTIPILPETNGRVAEIYVNVNGAVAKGAPI
                     FKLDSSKQEAAAETAQKKIAEVDAGMVVAKVDINKADAQIEEAKASYQQAIDELETKL
                     ELRRRNSGTVAEREIEKLQVLAEGRKAAVTAATATKDAAEARLST"
BASE COUNT         3191 a         5966 c         6000 g         3314 t
ORIGIN      
        1 gatggcgaac acggcggtgg tcatcaacga gttcggcgag atcggcctcg atcacctgct
       61 ggcggcgcgc agcgacgaca ccatcatggt gctggagaac ggctgcctgt gctgcaccgt
      121 gttcggcgat ctcgtcacca cgctcaacaa tctctatcac gcccgcgagg accgggcggt
      181 gccgcgtttc gatcatgtcg tgatcgagac ctcggggctc gccgatccgt cgccgctcat
      241 ccaggccttc ctgtccgacc cgacgctcgc cgggctttat cgcctcggca cggtggtcgc
      301 gaccgtcgat gcggtgaacg ggccggcgac gctcgacaag cacatcgaat cggtgcgcca
      361 ggcggcgctg gcggatcgca ttctcatcac caagctcgac ctgctcggcg cagcggaggc
      421 gaggggggcg gaagtggcgt tgaccgcgcg gctgcgccgg ctcaacccgg cagccaagat
      481 ttctcgcctc gacgatccgg cgctcgacat cggcggcctg ttgcgggctg cgggcctcga
      541 ccccggcggc gccggcgccg ccgcgcgcgc ctggctcaac gccgccgcct accagcagcg
      601 tgacggcggc cagcatccgg ccggcgaggg ccacgagcat tgcgacgatc acgcgcatcc
      661 cgacggtcac gcacaccacg atcatcacgg cctgcacgac cgcgatatcg cctcgttctg
      721 cttcatccgc gagcagccga tcgcgcgcga ggcgctgcgc ttgctgctcg acgccctgca
      781 gcagaatctc gggcccaacc tgctgcgggt gaagggcctc gttcacgtcg ccgaggagcc
      841 cgaccgcccg gcggtgatcc agggcgcgca gcacctcctg cacaatctgt cgtggctcga
      901 acgctggccg gacgaggatc gccgcagcaa gctcgttttc atcacccagg gattcgaccg
      961 cgccgaagtc gaggacatga tcgcggtgct cgaccgggtc gcgacccgta ccgccgcggc
     1021 gcgcgcccgc gcgcagagcc gcgcatgaac gcgacgatgg caggcaactt gcgcacgctc
     1081 ctccgcgcgc acgcggccgg ctgctcgatc ctcatccgcc tgctcgtcgg cctggtggtg
     1141 ttcttgccgg aagggctgct cagccgcgat cggcggcagc ctccggtctg aagcgagtgc
     1201 cccaccatgc cgcgcgcgcg tactcgcctc ttgctgctgg cggcaacatt ccttggcgga
     1261 atattggccg gcactgctgt cgatcgtgtg attgtcggcg ggccggcgtg gcacgagctc
     1321 ggtgcggcag cttggctgga atatagccgc cgcgccgatc tcgggaccgg tcttgtcgct
     1381 tatccgatcg aaggcatcgg agccgctctg ctggccattg cggcggccgt gagcaactat
     1441 ttcgacggca atcgccggcg ggggaccgtg ctgcctctat actgtgccgc cgcgttttcg
     1501 attgtcggat tgctgctcac cgtcaaggca gcgccgatca tgctgagcct ggcggcgccg
     1561 caagacgccg ccgccgccca acgcgccttc gatgcattct tcgtgtcggg tctttatctc
     1621 cgcggcgccg ccgaaacgct ggcgtttgcc gcgctggtat gggcactctc cgacctgtac
     1681 cggatcgagt agaccggact taagtcgctt tgcaaacact ggcgaccggg cgcgatgatc
     1741 ggtgcggcct cggcgggcca gccccccaca tgggatattg ttgactcctc atgaccgagc
     1801 gaccgatccg acgatacttt gccgggctct cccggacgac gtttctcctc gctttcgcca
     1861 gcctgttctc cgacatctcg accgagatgc tctatccggt gctgccggtg ttcctgacgc
     1921 agacgctcgg ggcgaccggc agcatcgtcg gcctggtcga cggccttgcc caggcggcgc
     1981 agaacatcat ccagggtctg tcgggcaccc tgtccgaccg gctgcagcgg cggaaacccg
     2041 tcgcgctcgc cggatatttt ctcgccgcca tcagcaagcc gctgatgggg ctcgccacgg
     2101 tctggcaggt cgtgttcggc gcgcggctcc tggaccggct gggcgccggc gcgcgttcgg
     2161 cgccgcgcga tgcgctgatt gccgcttcgg tcgcggaagc gcaccgcggc cgcgccttcg
     2221 ggctcgaagg cgtcggcgac aacgccggcg cctttctcgg cccggtcgtc actctgttgc
     2281 tgctctacgc gctccacttc gacatccgct cggtcttcta tctcgcggtg gttcccggcc
     2341 tgctggcgtt cgccctggtc gtcctcgtca aggagccgcg cgcggcagtc gcggccgaga
     2401 cgaaaatcga cgtcagtccg cggcagtttc cgccggccta ttggaaatac ctgggagtga
     2461 tcgcgctgtt cgcgctcggc aattccagca acgcgtttct catcctgcgc acgcaggaca
     2521 tcagcgcatc gctggaaaac accatcctga tctacgcggc gttcaacctc gtcgccgcgc
     2581 tgatctccta tccggccgga tcgctgaccg accgatgggg cggcaggaac gtcctcttag
     2641 ctgcgttcgg catttttctg atcggctatc tcggctttgc tttgacgcag aacgtcacgc
     2701 tgatcgccgg cctgttcgtg ttctacggac tgtaccaggg catctttcgc accgccggca
     2761 aggcgctcgc atcgagcttc gtatccgacc gcctgcgcgc cagcggcatc ggttggtaca
     2821 acaccacggt cggcctgctg cagtttgtcg ccagcgtcgc cgccggcctg ttgtgggacc
     2881 gcgtcgggca cgcggccgtg ttctactacg gcgccttctt tgccgcggtt ggcatggtgg
     2941 cactggtgtt gctgatccca agtcgtcgcg ggcaacggca tggggcggcg tagcggctgg
     3001 tgcgaccggc cgggtgtcat gccgccgaca caaataggct cgccacggtt ctctccggcg
     3061 gcaccgacct caacgaggcc attctcaagg gcggcaacac gaccgtgtcc gcggccggct
     3121 tcgacagcgg cgcgaccgtc agcagcggcg gcaagctcgt cgtcgcctcc ggcggcaccg
     3181 aggtcgatgc cacggtcagg gccggcggca gtgccgtaat ctcgtccggc ggcctcgccg
     3241 aactcaccgg cagtgccacc acgtccggtg tgacgctcct gtccggcgcc gttctgggag
     3301 tgggttccgg ctacacgctg accggtttcg ccgtcagcaa gggcatcacg ctcgacgtgc
     3361 tctctggcgg cacggcgaac agtgcgaccg tcaaggccgg cggcgttgag atcatcaccg
     3421 gcggcggcac cgaacacggc gcgaccgtga gctcgggcgg cattttcgtg gcgtcggcag
     3481 cgccagcgtc ggcggcgaca ccttcctcgg cggggccgtg gtcgaactcg gctccggctt
     3541 caagcatccg ctcagtgtca gcgccaactc atcgagcgta ccggtgcagg tcattgtcct
     3601 gtccggcggc acgctcagcg gcggcgaggt cccacgcggc tatgtggtga ccgtgcgctc
     3661 cggcggcatc gccagcgggc tcgccgtcga cagcggtgcg agcctcatcg tctcggccgg
     3721 cgggaccgac atcaacgcga ccgtatcggg cggcggcaag ctgatcgttt cctcgggcgg
     3781 ggtcgccgat ccgacgatca tcctcgccgg cggcaccgag atcgtgagcg cccacggtac
     3841 cgacgacggc gcgcacattt ccggcggcac gcatctcgtg ttcggcctcg ccagcggcgg
     3901 cacggtattc gccggcgcgc aggtcgtcgg ttcgagcggc acggcggctg cgaccgtcgt
     3961 gtccggcggc accgagatcg tcagcgcccg cggcattgcc agcggcgcga gcttgttcgg
     4021 cggcactgag ctcgtagcct ccggcggcac cgatatcggc gccacggtcg atggcggcgg
     4081 cgaactcgac gtcctcaagg gcggccgggc gagcggcacg ctgttcacct ctggcggcct
     4141 ggaaaccgtt tccgccggcg gactggtggt ttcagcgaag gtccagaata tcggccagaa
     4201 cagcgccggt ctgggactgc gcgtattggg cacggcaagc ggctcgctcg tcggcagcaa
     4261 tggtcagggg gtcgtctcca gcggcggcgt cgacatcggc gccacggtct tgagcggcgg
     4321 cttcctcacc attcactccg gcggcctcag catttccgcg acgctttccg gcaacacggc
     4381 aggcgccctc ggcgctgaat ttgtgcgctc aggcgggcgg acgtctcacg ccgtcatcga
     4441 cagtggcggt ttcctatccg tctcggccgg tggcctcgtg atatcgacga tcgtgaacag
     4501 caccggcgtc ggcacgagcg tgggcgggct ccttctatcc ggcgccgccg gcggcggcgc
     4561 cgcgagcgcc accttggtga atagcggcgg ccaagagagt attcattttg gcggcaagga
     4621 catcggcgca cggtcaacag cggcggcaac ctgttcgtca agtccggcgg tatcgccagc
     4681 cgcacgacgg ttatcggggt ggagatcgtc tcctccggcg gctccgcctt ggcgaacatt
     4741 atccagggtg tcggcgctac cggcggcggc ggctccggtc tgggtgtgtc cggctttggc
     4801 ttagccagcg gcaccgtgct caagaacggc ggcgaggaag gcgtgttcgc cggcggcacc
     4861 gatatcagcg ccacggtgtc gagcggcggc ggcctgttca tccactccgg cggcatcgcg
     4921 tcgggggcaa cgatcaaggc cggcgggctg ggcgttgtcg agtccggcag cgtgctcagc
     4981 ggcacgacga cggtgacgag cggcggcacc atcgagttta tcggcaccga tgccagcaac
     5041 aacggcctga agctgctcag cggcgctacc ggcgaactcg gctccggcgc cttcctcacc
     5101 gacgccaaga tcagcaaggg gatcaccttg gtgatcctct cgggcggcat tgccagcggc
     5161 ggcagcatcc tcgccggcgg cctcggcatc ctggaatcag gcggccaagt caccggcgac
     5221 ggcagcggca gctcgctgtt catcgccagc ggcggcacct tcgagtttgc cagcgggacc
     5281 aacggggggt cgaacatcca gccgttgtcc ggcgccacgc ttgaagtggg ctcaggcgcc
     5341 gccttcccgg tcaacaagat cgatgccggc attacggtga aggtcttgag cggcgcggcg
     5401 ctgaccttga gcggcgccac gatcagcacc ggcgcactgg tcgaaacctt gagcagcggc
     5461 accatcatcg tcagcggcgc gctggccgat tccggcacgc tgatggcgag tgggatcggg
     5521 agcctggtgg agatcgacag cggcgcggtg gtcagcggcg gcgcggtcgt ggtcggcaac
     5581 ggccttgtcg atgtgctctc cggcggcagc gccagcgtca ggttcctgtc gaacggcagc
     5641 ggcgggctgg agatcgcgga cacggacacc aatccgagca cctttagcgg cacggtgtcc
     5701 ggcttcggcg gggtcaatca taccaaccac aagcagttca tcgaccttgt ctcggttgcg
     5761 tccgcgccca atacgatcag cttgagttac gtctccgccg ccgccaacac gagcggcacg
     5821 ctgttcgtgt catcgggggg cgtcgaggtc gcggcgatca cgatggtcgg ccactactcg
     5881 gcaggcaatt tccacatcac cgccggcagc ggcgggacgg tggagatcgt cgatccgacg
     5941 gtcgtcaatg gcggcagcgt cgcgcccgga cccgcaacaa gaaccttccc ggggaacggc
     6001 gtcgatctgc cgaacatcgc cttcggcgcg cagacgacgc tggcctattc gcaaatgccg
     6061 tcggcacgac gctgacgatg agcgacggcc gccacgcggc ggcgatcgcg ctcctcggca
     6121 actacatcgc cggaagcttt gtcgccatgg ccgacggcca cggcggcacg ctggtcatgg
     6181 aagcgcaaac cgggcagcag ccgttgttga cccacccgcc gcatcagtga cgccgatcgg
     6241 cgcggcgctt ggccgcgcgc aacagaccgc ggccgtcaaa accgcgtcgt gacgtcggtc
     6301 agccattgcg gcgagtggtc gacggcgaac gtctcgatgc gcttgtcgag accggtcagg
     6361 acgaggaggc cgatcgccac gagcacgacg gcaaaggccg ccctggcgcg cgtcccaccg
     6421 gcaatcaggc gcgcgcgcca gcgagcgagc acgtcgcgcg aaaggaaccc cagcgccgca
     6481 agcggaaggc ccgcgcccag cccgaaagcc agcatcgtgg ccgcaaccgc accgagatcg
     6541 cggccctgcg ccgccagaat agatgccgct ccgagcgtcg ggccgacaca ggggctccag
     6601 accgcgccga gcagcagccc cagcgacagt tgaccggcaa ggccgctccc gcgcgtgccg
     6661 gcgaagtgcc ggtcgctcca gttcgccagc ggcgcgccgg cgagcgcgag ctgctcctgg
     6721 aagcgcggta cgaggagaac ggtcccggca atgaccatca gtgccgccgc gccgcggcgg
     6781 aatatttcgg cgtccagccc gatcgaatag ccgacggtcg cggcaaataa tccgatggcg
     6841 acaaacgaga ccgagaggcc gatggcgagc accgcgggtc cccagcgatg ctccgaagct
     6901 gcggcgccga gcacgaccgg gagaatgggc agcacgcagg gtgacaggac cgagagcacg
     6961 cccgcgatca atgccagcgc cagcgcgccc gccgtcatgg cgggctcaca acgtcttgtg
     7021 caacagcgcg gagatcgagg agcgttcggt atcgccggcc gagcggccgg tttcggtttc
     7081 acccttgaag gcgatcagcg tggactgcgc gcgcgcgccg aaatatttca ccgcatcctt
     7141 ctggctgtcg aagtcgacga cgaagtagac caagtccttg aattcgggct tggctgtgag
     7201 ctcgctcagg atcggcttct gcgccttgca ggtcggacac cacgatgcat ggatggcgac
     7261 caggatcggt ttccccgctt tctgggccgc cgcaaaagac ttcgcatcga aggtcttggt
     7321 ctcgaaggcc aaggcctggg cggtaaggcc cgtgctggcg gcgatcgcgg caagaacaac
     7381 ggaacggcgg gaaagcatga tgggagcact cctcgtcctg atggcaaaga gttttgtagg
     7441 gccggcaggc gttgcgtgca cgtcacaaac ggctggctgg aaatcaaatt ccggtcattc
     7501 ggccgtttgg ggcgaaggcc aaacagcggg caggcgcgcc ggcgagccgc tggtgccggg
     7561 cgttggccgg gatcggtgcc gatctggtcg tctggtcgac cagccgcgca aatgatctac
     7621 gatcacggac cccgaagcgg agaaccgtga cgaagcgggc ctttcggggc catttggaga
     7681 ttgcgcgatg agcaccgaga cggcgagcgg ccgcgccggc acgttcatgt tcgaccgcga
     7741 caccgaggcg atgccgcgcc gggccctcgc ggcgctgcag gcgagccgcc tcaaggacac
     7801 gctggagcgc gcctacgccc ttgcgcatta tcgccagaaa ttcgacgccg cgggcgtgcg
     7861 tccgggggat ttcaagtcgc tcgccgacat cggcagattt ccgttcacgc tgaaatcgga
     7921 tctgcgcgac aactatccct ttggcatgtt cgccgtgccg cgcgaaaggc tgctccggct
     7981 gcacgcgtcg tcggggacga cgggcaagcc cacggtcgtc ggctataccg cgggcgatct
     8041 cgacacgtgg tcggacttga tggcccgctc gctcgcctgc gccggcgctg cgcccggcga
     8101 catcgtgcac aacgcctacg ggtatggact gttcaccggc ggtctcggag tccactacgg
     8161 cgccgagcgt ctcggctgca cggtcgtgcc ggtctccggc ggggccaccg aacggcaggt
     8221 gacgctgctg gcggatttcg gcgcccgcgt gctgtgcgcc acgccctcct acgcgctcaa
     8281 catcgccgag gtcgccgtcg ccatggctgt cgacctgcgg ggcgggccgt tgcgggtcgg
     8341 cgtgttcggg gcggagccct ggagcgaggc cacgcggcgc gatctcgagg agcggctcgg
     8401 gatcgcagcc gtcgacattt acggactgtc cgagatcctc gggccgggcg tcgcctgcga
     8461 gtgccattcc gcgcaggccg gcctgcatgg ctgggaggac cattttctgt tcgaggtcgt
     8521 cgacccggaa acgctgcagc cgctgccgat cggcgaaagc ggcgagctgg tgatcaccac
     8581 gctgaccagg gaagcgctgc cgatggttcg ctaccggacc agggacatca cgcggctcaa
     8641 tgacgagccc tgcagctgcg gccgcaccca tgtccgcatc atgcgcgtca ccgggcgcga
     8701 cgacgacatg ctgatcatcc gcggcgtcaa cgtctttcct tcgcagctgg aagcggctgg
     8761 tcggcttccc ggggctggcg ccgcactatc agatcgtttt gacccgcgaa ggcgcgctcg
     8821 acgcgctgac ggtggaggtg gaggttacgc ccgacgcgcc gctcgcggag ggtgatcgcg
     8881 gccccaaggc aaggcaggtg agcgcccaga tcaaatcgct gatcggcgtg acctgcgatg
     8941 tcgtcgtcaa gtcttccggc gaagtgccac ggtcgcaggg caaggccgtg cgggtgaggg
     9001 atgagcggaa gaagtagcct tggccggaac ggaatgacgc agcaccggat cacacgactg
     9061 cacgcgcctc gccacgacca ggtccagctt cacatcgcga ccctggcggc cacctttggg
     9121 cgtttcgaca gaagcgagat cgtgtgccga gcaatcgcca gctcctcgtc cgtgggcacg
     9181 acgtagagct ttatcctgct cccgggccga gagatgacag tcttgttcgc cgcattggcg
     9241 gccggatcga gcgatacgcc aagccaacca agtctctccg cgattcgtgt ccgcatggtt
     9301 ggcgagttct cgccgatacc cgcggtgaat acgaatgcgt cgagcccgcc gagcgcggcc
     9361 gccaacatcc cggcagagag tccgatgcga tagacgaaat actcgatcgc gaacgccgca
     9421 gcgggtgccg cactggcttc gaggtcccgc acgtcgctgc tgacacccga cattccgcgg
     9481 aggccgcttt cccgatacag caggtcgcga acggccgacg gctccatgcc gcgctccatg
     9541 atgagataca gcaagacgcc gggatcgatc tggcccggcc gcgtccccat cggcagcccg
     9601 tccagcgcgg taaagcccat ggtactctcg acgcttctcc cgtcggcgat agcgcacatg
     9661 gacgccccgc tgccaaggtg ggcgacgatg acgcgtccgg ccgccacggc tgacgcgatt
     9721 tcgcgcaggc gctcggcgat gtattcgtag gagagaccgt gaaagccgta gcggcggatg
     9781 ccctcatcgt aaaagtgctg cgggagggcg aaatggtccg ccagggaatc atgaccgcga
     9841 tgaaaagcgg tgtcgaaaca tgcgacctgc ggcagttcgg accgggttcg gagcagtagt
     9901 ctgatcggcg cgaggttgtt gggctggtgc aacggcgcca gcgggacgta gctctccagg
     9961 cgcgaaataa cctcctcgtc gacgatgacc ggcttgtcga aatcggggcc gccatgaacg
    10021 acgcgatggc cgaccgcgac gagggtggat ttttgcgtct cgcggagcca gtcgcgcacg
    10081 gccgacatcg ctgccgcaac atcaggtacc tcgttcgtcg caaattcctt gtcgaccagc
    10141 gaagacccgt cctcgccttt ggcgcgcaac ttcgggcgaa cgccgatacc gtccatctgc
    10201 ccccagagca ggcgccgcgg ctccccggcc tcgccgaccg cgaatatctg gaatttcacg
    10261 ctcgacgagc cggcgttgac gacgagaatt gtttccatgg caggtcacgc cgcaggtaag
    10321 gccgcgcctt tcctgcgtgc ttcggcgtaa aggaccgctg cggggcagga tgcgaggcgg
    10381 ctgcgcacgg aatccgcgcg cgatgtaagg atgatcggaa cccgtgcacc aaggacggtg
    10441 cccgccgagg ccgtcttggc cggatagaca aggttcttcg cgatcatgtt gccggcctcg
    10501 atgtcagcgt attgcttcgg ggtcatgaca cgcccgctgg cgtgatggtc gatgtccggg
    10561 tcctgccatt gacaggtgac ccgtcacgtc aatgtgccat cgcgccattc cccggaaatt
    10621 gatgtgaatc aattccggcc ggctgttgtt tgcgtcgcaa tcgtggcccg ccgcccggcg
    10681 ggagaagccg tcaatatttt tccgcaacga aacgcctgcc gcgcagcgca gcgtggtcat
    10741 catatctgtt ctttaccatt cgcttgggca gctcgacgga tggcgtctcg ggctttccgt
    10801 gtggaatcga ggaaagaata tgggagatgc agttcagccg tcctcttcgc ttgtcgtcgg
    10861 tgcgcacgat gtgccagggc gcgtgcttgg tgtccgtgcg tttcagcatg aggtcacgcg
    10921 ctttcgagta ctcgtaccag cgtttgtacg actccaggtc catcggactt aatttccatt
    10981 ggcgcaatgg atcgctgatg cgagccagga agcgccgctc ctgctcctcc atcccgactt
    11041 cgagccagat tttaatcaac gttatgccgc catcgacaat gtgcttctct atttccggac
    11101 acaaatccag aaatcgctcg tgctcctttt cagtagcaaa gcccatcacg tattcgacgc
    11161 cggcgcggtt gtaccagctg cggtcgaata cgacggcctc gccgccggcg ggaaactgcg
    11221 tgatgtagcg ctgcatgaac atctggctct tttcccgctc cgtcggcgac ggcagtgcga
    11281 cgacgcgaaa cacgcgaggg ctgacccgct cggcgatcgc cttgatcgtt ccgcctttgc
    11341 cggcggcatc ccgcccctcg aagatgatga tgaccctcaa tcctttccgc ttgatccatg
    11401 cctgcaaacg gcagagcttt gtttgcagct tgcgcagctc cttctcatag gccttgcgct
    11461 tcattttgtc ggcgatcggc tgcttcttcg tcatggcaga ctggttcttt cctgtgacat
    11521 gaggtgatcg ttgttccgtc ctcagcatgg cgctactcgg ctgcgacgtc ggcgtgatcg
    11581 tgccgtgggc tggcggccgc ggcgggcggg gggtcggcgg cctcggccgg ggccggtttg
    11641 tgcggccgcg aagacggcct gagcttttcc ctgatagcct ggaagctcac gtacagggga
    11701 gggatggcga aaatgccgat gaaggaggcg aggatcatgc cgccaaatac cggcgtgccg
    11761 acgtcgcgcc gggcgagctg cgaggcgccc gacgcgacca ccagcggaag cagcccgagg
    11821 atgaatgcaa acgaggtcat catcaccggg cggaagcgca atcgcgcgcc ttcggtcgct
    11881 gcatcaagaa gcggaacgcc tttttctctt tgctccttgg cgaattccac gatcaggatc
    11941 ccgtttttcg cggccaggcc gatcagcacc accatgccga tctgcgcgta gagatcgagc
    12001 gtcaaccccg ccatgacgat gccgatgaaa gagccgatga ttccgatcgt taccgacaac
    12061 aacactggga tcggaatggt ccagctttcg tacagtgcga ccaaaaacag atacgcaaac
    12121 aagatcgcaa agccgaggat gatcgcggtc ttcccttcgg cgcgtttctc ctgaaacgcg
    12181 gtatccgtcc attcgccgcc gtacccctgc ggcagagtgt gcgccgccac ggcatccatg
    12241 gcctggagag cctggcccga cgaaacgccc gccgcggggc tgccctggac ggtgacggcg
    12301 cgaaggttgt tgtagcggat caaggcgggc gggccgactg cgatgcggac ctccgccagg
    12361 ctccgcagcg ggatcatgct cccgtctttg ctgcgtacgt tgatgcggta gatgtcatcg
    12421 atgctggagc gatcggttgc ttcggcctgc acctgcactt gccaggtgcg gccgaacaaa
    12481 ttcatgttgt tgatgtagta acccccgagc gaggcctgca gagactgaaa gacgttgctc
    12541 aagggtacgc cgaggatctg cgccttgtcg cggtcgatgt cgagatagat cgagggattg
    12601 gtcgcggaga acgtgctgaa cacgcggttg agcttcggat cctggttggc ggcgaccatg
    12661 agcccgcgca aagcctggtc gagcgccttg gaatcgccgc cgcgcaggtc ctcgagcacg
    12721 taggcgaagc cgccgccggt gccgaggccg agaatcggcg gcggcgccag cggtacgacc
    12781 gtgccgccct gaatttggcg aaacttctgg cccaagcgcg caatgagcgc cgccgcgcca
    12841 aggcttttgt ccttgcgctc gtcgaacggc ttgagcgtga cgaccatgaa ggcggcgttt
    12901 gattgcgagt agttgtcgat gaagttcaac ccgatcaccg aggtgacgtc gccgaccgcc
    12961 tcctcttcct tcaggatcgc ctcggcgcgc tggacgactt ccgtggtccg cgctaccgac
    13021 gatccgccag gcaattgcgc gacgacgaac aaggcgccct ggtcgtcctc ggggagaaag
    13081 ccagtgggag tgatcttggc aaggcccgcc gttgccacca tggcgacggc gaccatggcc
    13141 agcccgatga tcgaaaagcg aaccaggcgg gcgacggctg cgccatacgc gtcgcgcacc
    13201 cgatcgatcg agcgcatgac gtatcccatc acaccgcggc ggggtccgtg atggcggcgg
    13261 aggaaaacgg cgcacagcgc cggtgaaagc gtcagcgcgt tgattgccga cagcagcatg
    13321 gaaacggcga cggtcacggc gaactgccgg aacagctcgc cggagatgcc gggaataaac
    13381 gccaccggca cgaagaccga cagcagcacg agggtgatcg cgataatggg cgcggtaatt
    13441 tccgccatcg ccagcttggt ggcctcgccg gcggtgagct ccggatgctc ctccatgacg
    13501 cgttcgacgt tttcgaccac cacgatggcg tcatcgacca cgatgccgat ggcgagcacc
    13561 acggccagca gcgacaccgt gttcgccgaa tagccgacgg caagcaacgc aacgaacgtc
    13621 ccgatgaggc tcaccgggac cgccaatgtc gggatcagcg tcgcgcgtac gctgccgaga
    13681 aacaggaaga cgacgatcac cacgagaatg aacgcctcga tcaaggtctt ttgcacctcg
    13741 tggatggtat ccttgacgaa caccgtcggg tcgtaggtga tcttccaggc catgtcctcg
    13801 ggaaacctct tctgggcttc ctcgattcga ccgcgcacct ccttgagcgt attgatcgcg
    13861 ttcgcgccgg gcgtttgata gatggcgatg gccgccgccg gtccgccgtt gagccgcgtg
    13921 tcgcgatcga gattcgccgc gccgagcgcc accctggcaa tgtcgcgcaa gcgcagcacc
    13981 gagccgtcgg ggttggtgcg aatgacgata ttctcgaaat cctcgacgga gttcagtcgc
    14041 cccttggtct ggatattgag ctgaagctgc tggtcgtcgg aaatcgggcg cgcgccgacg
    14101 cgacccacgg cggcctgaat gttctgcgtc tggatcgcat tgatgacgtc ggcggtggtc
    14161 aggttcaggc cggtcagctg atcggttcgc acccaggcgc gcatcgcgta gtcctgcggg
    14221 ccccacagcg ctgcatcgcc gactccgggc gtgctcttga tccggtcgag aaggttgatg
    14281 gtaacgtagt tggagaggaa caacggatcg tgggtatgct tgggcgagta gacggcgatc
    14341 acgccaagca gcgccgacga cttcttcttg acagtcacgc cctggcgctg gacctcgggc
    14401 ggaaggcttg gaaatgccac ctggacgcgg ttgttgacgt tgaccgtgtt gatgtccgga
    14461 ttagtgccga gctcgaacga agcggtcagc gtgtagctgc cgtcgtcgcc gctcgtgctc
    14521 ttcatgtaga tcatcttgtc gacgcccacg acctgggcct cgatcacctg ggcgaccgtg
    14581 gactcgacca cggtggagtt ggcgccgggg taagcggttg tcaccgacac ctgcggcggc
    14641 acgatatcgg ggtattgcgc gaagggaatc gcgtagagcg caagcaggcc ggcgatcgtc
    14701 gtgacgatgg cgatgacgat ggcgagccgc gggcggtcga cgaatagcga ggagagcatc
    14761 ggctcagctc cgttcgagcg ctttcgccgc tggtctcgcc tgcaccgcca atcccggacg
    14821 aacgccttgg agcccctcga caatcacctg ctcgccgcct ttcaagccct cgttgatcac
    14881 cacattcggc ccgctctcgc cccccggctt gacccgccgc accgccgcct tcccgtcctc
    14941 gaccacgaac agatagatgc cttcctgatc ggcgatcagc gccgcttgcg ggacgattac
    15001 tttctcttcc ggggttccgg cctcgagcgt gacgctcacc agctggccgt caatcagcgt
    15061 gccggcagga ttcgcgatcg tcgctcgagc gatcacggtg tccgtggcgc ggtttaccga
    15121 cacatcgatg aagttgatcg agccctgctg gtcataggtc gaaccgttgg caaagcgcac
    15181 tttcaccttg atatccttga tctcgctttg acggccgctc acctgcgcct gcagcagatc
    15241 gcgctgactc accggaaagg tcacgtacat cgggtcctgg ctgacgatca aagtcaggga
    15301 gccgctttcc gggcctacga cgttgccggg ggtaatgctg gtccggctga tcttgccgtc
    15361 aatgggcgac acgatttcgg tgtagccgag attgatgtgg gcggtttcga ggttcgcctg
    15421 cgcggacagt actgcgcctt ttgcctgctc gtcgcccgcc aacgccacat cgcgtgcggc
    15481 gaccgtgccc gcctgctttt ctaacagttc ctccttcctc tgcagttcga ctgtgctgag
    15541 gactttggcc gccttggctc gctccaatgc accctgcgca tcatcgaccg cagcctggaa
    15601 caagcctttt tcaatctgat acagcgcgtc gcccttcttg acgaactctc cctccttgaa
    15661 aagcacagct tcgagatagc ccttgacccg ggcctgaacg acgacacgct ctctcgcttc
    15721 gatgcgcccc acgaagtcga gcgttttcgc tattggcttg cgctcggcat agaccgtacc
    15781 gaccgactgc gatggctgtt gcggctgctg ggcacccgcc ggtacgatgg cgcagatcag
    15841 gatcgagaca atcccgcaga gcgaccgtga ctttgcgctc agacgcctga acgggcgccg
    15901 gccggcaagg atcagcgagc gagcttgcct caacaggaac aaattccttg tcatagtgtg
    15961 cgtatgttag cggcccacta ccattcgggc gaggggtata gtttgcgtta gatcaatttg
    16021 cgtcggcacg agtgtgcgtt aaagagcaca acaccgctat acggagtgtg acatggcatc
    16081 gacgcagacg aaagccgcag atccgaacgc cgctggttcc ctcggggaat tgccgaccgc
    16141 caaggatctc atgcagcaag tcgccctgaa ggaggccgaa aaggcgtcgg cggcgatgcg
    16201 cgagcgaacg gcgggcgaga cggaaaagca ggctctgctc gaaaaactgt cgaagccgtc
    16261 aggtgtcgac gacaaggagc gcctggcgcg cgccaccgcc atcatcaagc gtgccgccgg
    16321 caacggcttg accgaggtcg aggtcgggag gtttcccaag gagctcttca ccgaccgcgg
    16381 ccgcgccatc aaccagatgg agcccggctg ggagaatacg ctcaccggcc tgccgaagga
    16441 gttgcttgag ttctggcggg aatttctcag gccgcacgga tataagctga aggttcaggt
    16501 cgtcgatttt cccggtggca taccgggaga catcggcatg acactgagct ggagttgacg
    16561 gcggctgagc gctgcggtgc ggccgcaacc gttcagggtt gcgcggcgca atggggcgat
    16621 ttggcgtgcg cagaacggcc ggggtctcaa tgaagtaggc gcggtcttct cgtccgacgg
    16681 gatgaccatc caattcgatc gcggcgccgt gtgggagcag tgcgttccgc cgatggcaaa
    16741 catctagaac ttgaggttcg aggacccggc gttaccgcga ggatcgaatc gattgcctat
    16801 gcacccaccg acaaagccgc cgtcccctga cagaacccgt acctatctct tcccaaacac
    16861 agtgcgcgct gcttccagga gcggcatttc atgatgcttg cggcagaaag cgtctacttt
    16921 tcccacgttc gcgcccagat cgccgtaatc gagcgtcgtg tcgccgcgct ctccatggaa
    16981 atagccgctg agccaattgg ccacggatct aggagtcgtt attttcccag tcaaatattg
    17041 cctgcatgtg atctttgcca catccaccgt aacctgcgca tgcgccgctg aactcccaac
    17101 aaacgcgccc agcagagcca gcgcaatcag ccgcgaaagc atctcgtatt ctcccatccc
    17161 agattggtca aaaaccaacc cgtcaatact tgatcactcg ttcgagcttt gggagtattg
    17221 cagaaaagtg gtcgtctgtc ctctaaggct tcgcctgcag atggccttga tttgggtcaa
    17281 ggctactgat tcaaggctgc cgcatcgttt ttaagtgagc tatactcctg agccaccaag
    17341 cgtcagccgt gttctgagta ccccgggtag gggcctcgat tggaggaact tatgacgacc
    17401 ccgcctcacc cggctgccgc acacaatctg cccattttca tcacggcccc cggcgacact
    17461 gacgtcctga tggtcgtaac ggctctgttt ctgctggtcg ccgtcgtcac gttcggcctc
    17521 gtattctttc gcattcatac cttgcccgag cgcatggcgc atgggtctca caaactgcag
    17581 ttcgagattg tcgccgtatt gggccttgtg gccttgttca ctcatatgca tggcttctgg
    17641 attgcgggac tgctgttggc gctgatcgac attcctgact tcccgggctg gctcggacgg
    17701 atcgcgaggg cggtcgagag gattgccggc atgaagcccg acgagtcccc ggtcgaggcg
    17761 ccgcccggga acgccgtcgc aagtgcatcg gccgaacatg caaccaaagt acccggccag
    17821 gctcaaagcc gctccgcaaa ggacgaggag ctgatccatg cttgagcttc tgctctgctc
    17881 ggcgctgacg attcttcctg actacctcta ccgacgcttc gtccaaggga aacgtttcgg
    17941 cagggaaata accctgtact cggtctggtt tgagctcagg tggggcatca cactctgcat
    18001 acttctaacg attttgctga tcacggtgat attttacaat cacccgtcca ccagcaacgt
    18061 gaccttgttt ttcagaacca ttccgattct tccggaaacg aacggtcgtg ttgcggaaat
    18121 ttatgttaac gtcaacggag ccgtcgccaa gggcgcgccg atcttcaagc tcgacagctc
    18181 caagcaggaa gccgcggccg agacggctca gaaaaagatc gccgaagtcg atgccggaat
    18241 ggtggtggca aaggtggata tcaacaaagc cgacgcccag atcgaggagg ccaaggcctc
    18301 gtaccagcaa gcgatcgacg agctggagac caagctggag ctgagaaggc gcaattcagg
    18361 aaccgtggcg gagcgcgaaa tagagaagct ccaggttttg gcagagggcc gcaaggcggc
    18421 tgttaccgct gccacggcga caaaagatgc ggcggaagcg cggctctcga c
//
LOCUS       DATMQB010000440         7686 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3037482, whole genome shotgun sequence.
ACCESSION   DATMQB010000440 DATMQB010000000
VERSION     DATMQB010000440.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7686)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7686)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7686
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3037482"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..866)
                     /gene="ychF"
                     /locus_tag="VNY79_12705"
     CDS             complement(<1..866)
                     /gene="ychF"
                     /locus_tag="VNY79_12705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018648334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HWX73354.1"
                     /translation="MGFKCGIVGLPNVGKSTLFNALTETAAAQAANYPFCTIEPNVGE
                     VAVPDRRLEALAALAKSDAIVPTRLSFVDIAGLVRGASKGEGLGNQFLANIREVDAIA
                     HVVRCFEDTDVTHVEGRIDPLADIETVETELMLADLESLERRLDGLQRKARGTDKDAK
                     EAKETLDLVGRGLALLREGKPARLTERKPEEERTFHMLGLLTSLPVLYVCNVDEAAAA
                     SGNAFSREVEARAAAEGAAAIVISGKIEAEIAVLHAGERETFLSAMDLKEAGLDRLIR
                     AGYRLLDLVTFFT"
     gene            complement(1056..2231)
                     /locus_tag="VNY79_12710"
     CDS             complement(1056..2231)
                     /locus_tag="VNY79_12710"
                     /inference="COORDINATES: protein motif:HMM:NF022307.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2652 domain-containing protein"
                     /protein_id="HWX73355.1"
                     /translation="MLPKPEPACLVMADISGYTGYLAGVELDHAQDILADLIDTIVGA
                     LRPPFQLSKLEGDAAFVYLVAPGFDGSHLQDTIESAYFTFRRRQRDIKQASICECDAC
                     RLIPTLDLKFIAHYGQIAKQTMSGQEELIGRDVILVHRLLKNNVEAKLARHAYILYTD
                     AFAQRTGMNPQAQGLIEHHETVEIIGDVRCWLRDLEAGWQADAARKRVEVSAAEAIAS
                     FVIDVEAARQTTWEFLTAPGHRVMWTAGATGVEEDVANGRRGAGTVNHCMHGKDVIIE
                     EVLDWQPPDYLTRRIQLFDTGVNLTLTHALSDGPSGGTRIEVRVAPPPPELMERFVQI
                     GPMMQQSMQASGEALVKLLNEAAAGIRARVAAAPELPASAARFATQPVVHDRGSAPG"
     gene            complement(2533..3144)
                     /gene="pth"
                     /locus_tag="VNY79_12715"
     CDS             complement(2533..3144)
                     /gene="pth"
                     /locus_tag="VNY79_12715"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004045 - aminoacyl-tRNA hydrolase
                     activity [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HWX73356.1"
                     /translation="MQLLVGLGNPGARHAGNRHNIGFMVVQAIAKRHGIGPWRRRFQG
                     VACEGPIGSERVLLLLPGTYMNESGRAVGEAAHFYKLAPGGITVFHDEIDLVPGKVRV
                     KIGGGVAGHNGLRSITAHIGNDYRRVRIGVGHPGDKDLVHAHVLSDFAKSERGWVEAL
                     IDVLADNVGLLVRGEDASFQNKVHLAMAAKGFGEGASAPEADD"
     gene            complement(3170..3913)
                     /locus_tag="VNY79_12720"
     CDS             complement(3170..3913)
                     /locus_tag="VNY79_12720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012564320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_function: GO:0008097 - 5S rRNA binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HWX73357.1"
                     /translation="MATVNLIKAAARPRAGKGAARAERRVGRVPGIIYGDGKPPLPIS
                     LDYSDLRQRIYAGHFLTTIHDVEVDGVKHRVIPRDFQLDAVRDLPLHVDFMRLGEGAT
                     IRVNIPIRIRNADQAPGVKRGGTVSIVTHTIEVRCLAEAIPSAIEVDVSGLEINYSKH
                     LSDITLPQGVRAVAAKDLTLVTVVPPSGYAEEMKAAAEAAAAAAAAAAAAVAGAPGEG
                     AAPVGAPGAAPGAAPPAGGAGGVGAPEKK"
     gene            complement(4051..4359)
                     /locus_tag="VNY79_12725"
     CDS             complement(4051..4359)
                     /locus_tag="VNY79_12725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016844503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory factor UbiK family protein"
                     /protein_id="HWX73358.1"
                     /translation="MVQTTNRFFDEVARLMNDAAGVATGVRREFETLFRSQAERILRD
                     LDVVQREEFEAVKEMARLAREENEALKLRVATLEAALGGAKPSAGAPGGAAPGGSPGL
                     "
     gene            4554..5384
                     /gene="lgt"
                     /locus_tag="VNY79_12730"
     CDS             4554..5384
                     /gene="lgt"
                     /locus_tag="VNY79_12730"
                     /EC_number="2.5.1.145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008961 -
                     phosphatidylglycerol-prolipoprotein diacylglyceryl
                     transferase activity [Evidence IEA];
                     GO_process: GO:0009249 - protein lipoylation [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HWX73359.1"
                     /translation="MLVLPVLPFPAVDPVLISIGPLAIRWYALAYIVGIIAGWFYARA
                     LIASKRLWGGPAPLTVVDFDDFVIWITLGIILGGRIGYVLFYNFGLFAAHPLEILELW
                     NGGMSFHGGFIGCGVAIILFALRRGLPMLSLSDVITAVAPIGLFLGRLANFINGELWG
                     RPSDVWWAMVFPNGGPVPRHPSQLYEAALEGLVLFAVLAVLVWLGGLKRPGLVTGAFA
                     VGYGVARVVCELFREPDAQLGFLWGGLTMGMLLCIPVILAGAALIGLALRREPIAKNG
                     "
     gene            5377..6477
                     /locus_tag="VNY79_12735"
     CDS             5377..6477
                     /locus_tag="VNY79_12735"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SAM-dependent methyltransferase"
                     /protein_id="HWX73360.1"
                     /translation="MADERSPLESEIRRLIVAAGPMPVGDYMRLCLTHPQHGYYLTSD
                     PIGTSGDFITAPEISQMFGELIGVWMASVWKQMGAPENVRIVELGPGRGTMMVDALRA
                     AKVVRDFHAAIVLHLVEISPILQRQQQERMETLGLPVLWHATLDDVPGGPSIVVANEF
                     FDALPVHQAVKRADGWHERVIEINPSGDLVFGVANEPLAHFGTTLPRGLRQSPDGSIY
                     EWRSDRVVLELGRRVRTDGAALIVDYGHAWYGLGETLQAVADHKHADPLRSPGCIDLT
                     AHVDFRGLAVSAETIGARIHGPVSQRDFLRRLGIEKRAAALKTRVAPEKEAEIDSALS
                     RLTATGTGGMGELFKVLAISDARLGQLPGFQP"
     gene            6481..7245
                     /gene="pgeF"
                     /locus_tag="VNY79_12740"
     CDS             6481..7245
                     /gene="pgeF"
                     /locus_tag="VNY79_12740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan editing factor PgeF"
                     /protein_id="HWX73361.1"
                     /translation="MIIQAETLALPGVRHAFFTRRGGASAGVYASLNGGIGSRDSANL
                     VADNRTRMAAALGVGPDRLLTAYQIHSPHVVTIEAPWTSETRPRADAIVTGTRALAIG
                     VTTADCGPILFADPQAGVVGATHAGWRGALAGIVEATVDAMERLGAQRRQIRAVLGPM
                     IRQGNYEVGPDLMARFRAEDSTSDPFFRPAAREDHALFDLAGYIAARLHRADIRQVED
                     LGLCTYADPDRFFSFRRSTHRADPDYGRHVNAIALA"
     gene            7409..>7686
                     /locus_tag="VNY79_12745"
     CDS             7409..>7686
                     /locus_tag="VNY79_12745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_028174674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase-like
                     domain-containing protein"
                     /protein_id="HWX73362.1"
                     /translation="MASNNGAIKLVAGNSNPALSEGIGAYIGTPLTKAVVRRFADMEI
                     FVEIQENVRGADVFVIQSTSFPANDHLMELLIIIDALRRASARRITAVL"
BASE COUNT         1229 a         2597 c         2513 g         1347 t
ORIGIN      
        1 gtgaagaagg tgaccaggtc caagagccgg tagccggcgc ggatcaaacg atcgagtcca
       61 gcctccttga gatccatggc gctgagaaac gtctcccgct ctcccgcgtg caatacggcg
      121 atttccgctt cgatcttccc ggaaatgacg atcgccgcgg caccttccgc cgcagcccgg
      181 gcctcgacct cacgcgagaa ggcgttgccg cttgccgccg cggcctcgtc gacgttgcac
      241 acatagagca cgggcagcga cgtcaagagc ccgagcatgt gaaaagtccg ctcttcctcg
      301 ggcttgcgct cggtgaggcg cgccggcttg ccctcgcgga gcaacgccag cccgcggccg
      361 acgaggtcaa gcgtctcctt cgcctctttg gcatccttgt cggtgccgcg cgccttgcgc
      421 tgcaggccgt cgaggcgccg ctccaggctc tcaagatcgg cgagcatcag ctccgtctcc
      481 accgtttcga tatcggccag cggatcgatg cggccctcga cgtgcgtgac gtcggtatcc
      541 tcgaagcagc gcaccacatg cgcgatggcg tcgacctcgc ggatattggc gagaaactgg
      601 ttgccgagcc cctccccttt cgaggcgccg cgcaccagac cggcaatgtc gacgaagctc
      661 agccgcgtcg gcacgatcgc gtccgacttc gccagcgccg caagcgcttc gaggcgccga
      721 tccggcaccg cgacctctcc gacattcggc tcgatggtgc agaacggata gttcgccgcc
      781 tgcgcggcgg cggtctcggt gagcgcgttg aagagcgtcg acttgccgac attcggcagg
      841 ccgacgatgc cgcatttgaa gcccatgggc cgatgtcagt ttctggtggg ggattggcga
      901 acgtcggtgc cgtggttcgg acgaaccggt gagataggag cgctcgcggc gatttgcgag
      961 ggctcgaggt catccgcagg atggcggtgg gctgcgacag cacgccggcg gtcacctgcg
     1021 gcgaagacaa atgaaggcaa atgcgggcgc cgaggtcagc cgggggcgga gccgcggtca
     1081 tgaaccaccg gctgggtcgc gaaacgcgcg gccgaggccg gcagctccgg cgccgcggcg
     1141 acgcgggcgc ggatgccggc ggcggcctcg ttcaagagct tcaccaacgc ttcgccggaa
     1201 gcctgcatcg attgctgcat catcggccca atttgcacga aacgctccat cagctccggc
     1261 ggcggcgggg caacgcggac ttcgatgcgc gtgccgccgc tggggccgtc gctcagcgcg
     1321 tgggtgagcg tgaggttcac gccggtgtcg aacaactgaa tccgccgggt gaggtaatcg
     1381 ggcggctgcc agtcgagaac ctcttcgatg atgacgtctt tgccgtgcat gcaatggttg
     1441 accgtcccgg cgccgcgtcg cccgttcgcg acatcctctt cgacgccggt cgcgccggcg
     1501 gtccacatca cccgatgacc gggagcggtg agaaattccc aggtcgtctg ccgcgcggcc
     1561 tcaacgtcga tgacgaaact tgcaatcgcc tcggcagcgc taacctcgac ccgcttgcgc
     1621 gctgcatcgg cctgccaacc ggcctcgagg tcgcggagcc agcatcgcac atcgccgatg
     1681 atctcgaccg tctcgtgatg ctcgatcagc ccctgcgcct gcgggttcat gccggtgcgc
     1741 tgcgcgaagg catcggtgta gaggatgtag gcatgacggg cgagcttcgc ctcgacgtta
     1801 tttttcagca ggcgatgaac caggatcacg tcgcggccga tcaactcctc ctgcccggac
     1861 atggtctgct tggcgatctg tccgtagtgg gcgatgaact tgagatcgag cgtcgggatc
     1921 agccggcagg cgtcgcattc gcagattgag gcctgcttga tgtcacgctg ccgccggcgg
     1981 aatgtgaaat acgcgctctc gatcgtgtcc tgcagatgcg agccgtcgaa ccccggcgcg
     2041 acgagataga cgaaggctgc gtccccttcg agcttcgaca actggaaagg cgggcggagc
     2101 gcgccgacga tcgtatcgat caggtcggcc aggatgtcct gggcgtgatc gagctcgacc
     2161 ccggcgagat aaccggtgta gccggagatg tcggccatga cgagacatgc gggttcgggc
     2221 ttgggcagca tggcatcacc gatcagctcg aaagaggggg cacgcatcgc ggcggaaccg
     2281 acggcccgtc gcagtctagg ccgacggagc cacggcactc aacgtgccga ggatcgtccg
     2341 cacctcaata tacgcggccg aggccgcagg gtttcatttc gaccgcgtga agctcatccg
     2401 ccgcgaggac tggaacctcg gatcgaaatt gaaaggctca acaccatctg cgccggcgga
     2461 aatgtccaga taagcgccga tggcagtcgg tcggtcatct tgttagtccg gagtccggat
     2521 tcccgttgcg ggctaatcgt cggcctccgg tgccgaggcg ccttccccaa aacccttcgc
     2581 cgccatggcg aggtgcacct tgttctgaaa gctcgcatcc tcgccgcgca ccagcaggcc
     2641 gacattgtcg gcgagcacgt cgatgagcgc ctcgacccag ccgcgctcgc tcttggcgaa
     2701 atcgctgagc acgtgcgcgt gcaccagatc cttgtcgccg ggatggccga caccgatgcg
     2761 aacccgccga tagtcgttgc caatgtgcgc ggtgatcgaa cggagcccgt tgtggccggc
     2821 aacgccgccg ccaatcttta ccctcacctt gcccggcacc agatcgatct cgtcgtggaa
     2881 gacggtgatg ccgcccggcg cgagcttgta gaaatgcgcc gcctcgccga cggcgcggcc
     2941 cgactcgttc atgtaggttc cgggcaggag cagaaggacg cgttcgctgc cgatcgggcc
     3001 ctcgcaggca acaccttgaa agcggcgacg ccacggcccg atgccgtggc gcttggcgat
     3061 cgcctggacg accatgaagc cgatgttgtg ccggttgccg gcgtggcgcg cccccggatt
     3121 gcccagaccg accaggagct gcatcggctt ccgccccgca cgggaggcgt cactttttct
     3181 ccggcgcgcc cacaccaccc gcaccgccgg caggcggggc cgcgccgggc gcggcacccg
     3241 gtgcccccac aggcgctgcg ccttcccccg gcgctcctgc aaccgcagcc gccgcagcag
     3301 cggccgctgc agccgccgct tccgcggccg ccttcatttc ttccgcatag cccgacggcg
     3361 gaacgacggt gaccagcgtg aggtccttcg ccgccacggc acgcacgccc tgcggcagcg
     3421 tgatgtcgct cagatgcttg gaatagttga tttcgagccc gctcacatcg acctcaatgg
     3481 cgctcgggat ggcctcggcc aggcagcgca cctcgatcgt gtgggtgacg atgctgaccg
     3541 tgccgccgcg cttgaccccg ggcgcctggt cggcgttcct gatccggatc gggatgttga
     3601 cgcggatcgt cgcaccctcg ccaagccgca tgaaatccac atgcaacggc aggtcgcgga
     3661 cggcgtcgag ctgaaagtca cggggaatga cgcggtgctt cacgccgtcg acctcgacgt
     3721 cgtgaatggt ggtgagaaag tgtccggcat agatgcgctg gcgcaggtcg ctgtagtcca
     3781 gcgagatcgg caacggcggc ttgccgtcgc cgtagatgat tccgggtacg cggcccacgc
     3841 gacgctcggc ccgggcggcc cccttgccgg cccgcggacg cgccgccgct ttgatgagat
     3901 tgacggtcgc catgatgtga gttcctcgtc taccgcttgt atgcaggaaa gagccgcggc
     3961 agcctccagg ggtgctggag ccgcggtggc gggcttatag cggcgcgagt gatgaaaaac
     4021 aagaaagcgg cggcgcagcg actggccgca tcaaagcccg gggcttcctc ccggagcagc
     4081 gccgcccggt gcaccggctg acggctttgc tccgccaagc gccgcttcaa gcgtggcgac
     4141 acggagcttg agcgcttcgt tctcttcgcg cgcaaggcgg gccatctcct tgaccgcctc
     4201 gaattcctcg cgctggacaa cgtccaggtc gcggagtatg cgctcggcct gactgcggaa
     4261 cagtgtctcg aattcgcgcc gcacgcccgt ggcgacaccg gcggcgtcgt tcatcagccg
     4321 ggcgacttcg tcgaaaaacc ggttcgtcgt ctggaccatg actgcctccg aaccctgctg
     4381 gcggcggctg ctcgccactc aagcttgcga tcctcgcaaa caatggcaat ggtgcggcgc
     4441 ggccgcaagg ggagcggcgg cgaaggaccg gcgcttcgcg cccgcttgga aggaccggcg
     4501 cttcgcgccg cttggaagga ccggcgcttc gcgcccgctt ggaagccgat ttgatgcttg
     4561 ttctgcctgt cctgccgttt ccggcggtcg atccggtgct gatttccatc gggccgcttg
     4621 ccatacgctg gtatgccctc gcctatatcg tcggcatcat cgccggctgg ttttacgccc
     4681 gcgcgctcat tgcctcgaag cggctatggg gcggaccagc gccactcacc gtcgtcgatt
     4741 tcgatgattt cgtcatctgg atcacgctgg gaattatcct cggcggccgc atcggctatg
     4801 tgctgttcta caatttcggg ctcttcgccg ctcacccgct cgaaatcctc gaattgtgga
     4861 acggcggcat gtcgttccat gggggcttca tcggttgcgg tgtcgccatc atcctgttcg
     4921 cgctgcgccg cggcttgccg atgctttcgc tgagcgacgt gatcaccgcc gttgcgccga
     4981 ttggcttgtt tctcggccgc ctcgccaact tcatcaacgg cgagctctgg ggccggccaa
     5041 gcgacgtgtg gtgggccatg gtctttccca acggcggccc ggtcccgcgc caccccagcc
     5101 agctctatga ggcggcgctc gaagggttgg tcctgttcgc ggtgcttgcg gtgctggtgt
     5161 ggctgggagg cctcaagcgg cccggccttg tcaccggcgc ttttgccgtg gggtatggcg
     5221 tcgcacgcgt cgtctgtgaa ctgttccgtg agcccgatgc ccaactcggc ttcctttggg
     5281 gcgggctgac catggggatg ctgctctgca ttccggtgat cctggccggc gccgccctga
     5341 tcggcctggc cttgaggcgc gaaccgatag cgaaaaatgg ctgacgaacg ttcgccgctc
     5401 gagagcgaaa tccgccggtt gatcgtcgct gccggaccaa tgcccgtcgg tgactacatg
     5461 cggctatgcc tgacccaccc ccagcacggc tattacctga ccagcgatcc gatcggcacc
     5521 agcggcgatt tcatcacggc accggagatc agccagatgt tcggcgagct gatcggggtg
     5581 tggatggcgt ccgtctggaa gcagatgggc gcacccgaga atgtgcgcat cgtcgaactc
     5641 ggccccgggc gcgggacgat gatggtcgac gcgctgcggg cggccaaggt cgtccgggat
     5701 ttccacgctg cgatcgtcct gcatctggtc gaaatcagcc ccatcctcca gcgccagcag
     5761 caggagcgga tggaaactct cggtctgccg gtcttgtggc acgcaacgct cgacgacgtg
     5821 ccgggcgggc cgagcatcgt tgtcgccaac gaattctttg atgccctgcc ggttcatcaa
     5881 gccgtcaagc gcgccgacgg ctggcatgag cgcgtcatcg aaatcaaccc gagcggcgat
     5941 ctcgtcttcg gagtcgcaaa cgaaccgctg gcgcatttcg gcaccacgct gccgcgcgga
     6001 ttgcgccaat cgcccgacgg ctcgatctac gaatggcgct cggacagggt ggtgctcgaa
     6061 cttggccgcc gcgtgcgcac ggacggcgcg gcgctcatcg tcgactatgg ccacgcctgg
     6121 tacgggctgg gcgagaccct gcaggccgtg gccgaccaca agcacgccga cccgttgcgc
     6181 tcgcccggct gcatcgatct caccgcccac gtcgatttcc gcgggctcgc ggtgagtgcc
     6241 gaaacgatcg gcgcgcgcat ccacggcccg gtttcccagc gcgacttcct ccgccgcctg
     6301 ggcattgaga agcgcgcggc ggcgctcaag acgcgcgtcg cacccgagaa ggaagccgag
     6361 atcgacagcg cgctctcgcg cctcacggcg acgggaacgg gtggaatggg cgaattgttc
     6421 aaggtgctcg ccatctccga cgcccgtctc ggccagcttc cgggcttcca gccgtaagcc
     6481 atgatcatcc aggccgagac cctcgcactt cccggcgtcc gccatgcgtt ctttacgcgg
     6541 cgcggcggcg cctccgccgg ggtctatgcc agcctcaatg gcggcatcgg ctcgcgggac
     6601 agcgccaatc tagtcgccga caaccgcacc cgcatggcgg cggccctcgg tgttgggccg
     6661 gatcggctgc tcaccgccta ccagatccac tcgccgcacg tcgtgaccat cgaggcgccc
     6721 tggacctccg aaacgcgccc ccgcgccgac gcaatcgtga cggggacccg cgcgctggcc
     6781 atcggcgtga ccacggccga ttgcggaccg atcctctttg ccgacccgca agcgggcgtc
     6841 gtcggtgcga ctcatgccgg ctggcgcggg gcgcttgccg gaatcgtcga ggcaacggtc
     6901 gatgccatgg aacggctcgg cgcccagcgc cggcagatcc gcgccgtcct cggcccgatg
     6961 atccgccagg gcaattacga ggtcggcccc gatctcatgg cccgtttccg cgccgaggat
     7021 tccacgagcg atccgttctt tcggcccgca gcgcgcgagg accatgccct gttcgacctc
     7081 gccggctata tcgcggcgcg gctccaccgc gccgatatcc gccaggtgga ggatctcggg
     7141 ctgtgcacct acgccgatcc ggaccgcttt ttcagcttcc ggcgttcgac ccaccgcgcc
     7201 gatccggact acggccgcca cgtgaacgcg attgcgctgg cttgagcgcg cgaatggatg
     7261 aatgacgttc ggcgaattgg cgatctcccg cgatccaaat tgttcaccat ctcgcccctt
     7321 cgcggggact attcacaagg cccgaattca tgttgccagc ccggtaagcg gcttgtatca
     7381 ggtccgggcg cgcgcgtagg agagtgggat ggcgagcaac aacggagcaa tcaagctcgt
     7441 tgccggcaac tccaatcccg ccctgtccga gggcatcggc gcctatatcg gcacgccgtt
     7501 gaccaaggcg gtcgtgcgcc gcttcgccga catggagatc ttcgtcgaga tccaggaaaa
     7561 cgtgcgcggc gccgacgttt tcgtcattca gtcgacctcg ttcccggcga acgaccacct
     7621 gatggagctg ctcatcatca tcgacgcgct gcggcgcgcc tcggcgcggc gcatcacggc
     7681 ggtgct
//
LOCUS       DATMQB010000441        10600 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3643734, whole genome shotgun sequence.
ACCESSION   DATMQB010000441 DATMQB010000000
VERSION     DATMQB010000441.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10600)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10600)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10600
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3643734"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(151..226)
                     /locus_tag="VNY79_12750"
     tRNA            complement(151..226)
                     /locus_tag="VNY79_12750"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(191..193),aa:Lys,seq:ttt)
     gene            365..1528
                     /locus_tag="VNY79_12755"
     CDS             365..1528
                     /locus_tag="VNY79_12755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_function: GO:0016810 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="M20 aminoacylase family protein"
                     /protein_id="HWX73363.1"
                     /translation="MPIVNRVADLHDEITEWRRDLHAHPELQYDVHRTAGSVSERLKS
                     FGCDDVVAGIGRTGVVGVIRGRKPGAKVIGMRADMDALPIEEATTVAYKSTVPGKMHA
                     CGHDGHTAMLLGAAKYLAETRNFAGTAVVIFQPAEEGGAGARAMMDDGLFDRFGIEEV
                     FGMHNYPGMPIGQFAIRSGPMMASTDTIGIDLEGVGGHAAWPHFGVDTVLVGAQIVNQ
                     LQSIVARNVDPLQAAVISICMFQAGHADNVIPQQAKLRGTARALSPKVRDLLQKRVRE
                     VVEGTARAYGAKAELTYTTGYPVLVNEELKTAFAAGVACEVAGKDKVNTDCAPLMGAE
                     DFAFMLQERPGAFIYIGNGNSAQLHNPAYDFNDEAIPVGTSYWVRLAETALAG"
     gene            complement(1537..4179)
                     /locus_tag="VNY79_12760"
     CDS             complement(1537..4179)
                     /locus_tag="VNY79_12760"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HWX73364.1"
                     /translation="MRTVAVVLALVTCVHVGLWASLRTKETAPDFTGQLASISYAPFV
                     ASQHPDYGDRPTVEQIRTDLRAIAPYTRAIRTYSATGGAELVPPIAAEFGLKVTVGAW
                     IDKNQERNEREIRSALDLARRYNNVNAIVVGNETTLRAEMSVADLMQLIQRVKRSSPV
                     PVTTGEIWTVWIDHPELASAVDFIAAHILPYWEGLDVSRAVDQTIEFYDKLRRAHPGK
                     RIVIAEFGWPSAGYNFHDANPGRVEQAMVIRDFVARAEAYGIDYNIVEAIDQPWKTFE
                     GGVGPYWGLFDASRQAKFSWTGAITDPDYLKRAGLAVLLGLLLCLPILTINGATATQT
                     LMLAAAANLVGAWFAAIVAFWKGHYFVPGAAFALALGILLLVPLVVIALARIDEIAAV
                     AFGRPPRRFAGAPPLVPEVFLPKVSIHIPACNEPAAMLTATLDAVARLDYANFECVLV
                     INNTPDPALWRPVEEHCRVLGDRFKFVRVEELAGYKAGALRLALAHTAADAEIIGVLD
                     ADYAVDPAWLKDLVPLFADARVGMVQSPQDHRDGDRSPMHRALNAEYAGFFDIGMVQR
                     NEVNAIIMHGTMCLLRRAAIESTGGWSSDTIVEDTDLGLAVLERGWLAHYTNHRYGYG
                     LLPDTFEAYKRQRHRWAFGGLQLVRKHWQHLLPWAEGLTREQKREYGLGWLNWLGADS
                     IGVVVALLNIVWVPVVAFANIAVPDRILTLPILAAFMVAVAHFTALYRLRVKVPIVHM
                     LGAVFAAMAMQWTVARAVGSGVLKERLPFLRTAKGGATRKGDFPAFWEAVIAALLLIG
                     AATLVVTNYKQVHEINIFAAVLVVQSLPFLSAVAIALIEGTRLNSFEFWRRIEAKTAA
                     LLPRSQVIAEPPKVPAENHVEAAQ"
     gene            complement(4385..4861)
                     /locus_tag="VNY79_12765"
     CDS             complement(4385..4861)
                     /locus_tag="VNY79_12765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002715776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-1-3, beta-1-6-glucan biosynthesis protein"
                     /protein_id="HWX73365.1"
                     /translation="MSNRLLRAAGGLSLAAWLLWTPLAFAQGNEPKPPEKPPAAGQEP
                     AKEPQKADEFAEAQRAVTGAAGNPECVWLGRRVVNLLWRDDLDTAFRHLDLYDRFGCP
                     SAHIQASFRCLILHGNNIDPKAADSLNGRIHACWINPAAPAMPPPAPPAANTPPKG"
     gene            5069..6688
                     /locus_tag="VNY79_12770"
     CDS             5069..6688
                     /locus_tag="VNY79_12770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-(1-6) glucans synthase"
                     /protein_id="HWX73366.1"
                     /translation="MPNAKAVGPALASFALTALAIGIVWWWLGAGMALPPSPLPARAK
                     LYCVSYAPFRAGQDPLVEGTRVEPWQIEEDLALLSKYSNCVRTYSIDDGAESVLASAR
                     RHGLKVLHGVWLSNKADKNRRQIATTAALAKEYADVISAVIVGNEVLLRGEMSATDLM
                     AAIREVKAQVAKPVTYADVWEYWLRYADVRNAVDFVTIHILPYWEDFPIPASLAAAHV
                     AAIHARVAAAIPGKDILIGEFGWPSAGRMRERARPSPWNQARVISETLALAEREHFKV
                     NIIEAFDQPWKRALEGAVGGYWGIFDRATDGLKFRFGGTVSEHPQWPWQAAAGIALAA
                     LSFAGAFAAGRTKGISPYLWPEVAALSFLPAVMFGWTIETVPVESFSVGSWLRSLAFA
                     ATAGAAPVVCAIACAAGRAVPAFSSFLGPGRKRPDGLDWVLGGSLIALMLVSIEAALG
                     LVFDPRYRDIAFAPLTAAALPFLVVLVSTPRPAGARAMAETVGAAVLALSSGYVLFNE
                     GFANWQSVWFCAGLFGLAFILALARDAPSPG"
     gene            complement(6648..7055)
                     /locus_tag="VNY79_12775"
     CDS             complement(6648..7055)
                     /locus_tag="VNY79_12775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009339531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73367.1"
                     /translation="MIVGVTAIDQPRSLFRPTARQLNWLLVIGFLSVGEALYLRYLAI
                     ENGTVSLACQAGLDTWLCRTFRLTIVLFNHQVFGGAALVAALLNLVRPSLVLVAVALA
                     AAAFGVVLHNADLSALAVGILILGLARPAPVPE"
     gene            complement(7066..7329)
                     /locus_tag="VNY79_12780"
     CDS             complement(7066..7329)
                     /locus_tag="VNY79_12780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73368.1"
                     /translation="MDLGSAVSIQTLKARWSGTRSAHPQLFVGLQAVATLKEIPRSRR
                     AELRLVVGPLPSPGAAVELCATLASFRVSCQPTNFDGQHLALQ"
     gene            complement(7293..7997)
                     /locus_tag="VNY79_12785"
     CDS             complement(7293..7997)
                     /locus_tag="VNY79_12785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73369.1"
                     /translation="MAGQAQTANAAAKKVTQPAFTMQSLCRIALWGTTAATALLVAIL
                     TSRSDAGSQRIATTPGATHGAPRQFDAESAARQLTQAVRGLTEDRDRLIARLAALEHS
                     LGDITGAIAGQSEKATPPAAEGATQTGDLKTANAPAANAPEADALGADAPAANSAAVP
                     PPWSAGDLPEAGMASSTAAAAPVVPPFAGLPSRLPVIFDAPSPRQATSALTGAAEGPQ
                     SAAYAWTSAAPSPFRR"
     gene            8178..9545
                     /gene="glmU"
                     /locus_tag="VNY79_12790"
     CDS             8178..9545
                     /gene="glmU"
                     /locus_tag="VNY79_12790"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003977 - UDP-N-acetylglucosamine
                     diphosphorylase activity [Evidence IEA];
                     GO_function: GO:0019134 - glucosamine-1-phosphate
                     N-acetyltransferase activity [Evidence IEA];
                     GO_process: GO:0000902 - cell morphogenesis [Evidence
                     IEA];
                     GO_process: GO:0006048 - UDP-N-acetylglucosamine
                     biosynthetic process [Evidence IEA];
                     GO_process: GO:0009252 - peptidoglycan biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HWX73370.1"
                     /translation="MKARTCLAIVLAAGEGTRMRSAVPKVLHAIAGRPLIAHLLAAIA
                     EAGITDTAVVIGPGQEAVTAAARRVLPHAAAFVQHEQRGTAHAALAAKAAITRLEADD
                     VLIVYGDTPLVRPATLKRLRAPLAAGAALAVLGFRAADPFGYGRLVVADGKLVAIREE
                     ADASAGERAINLCNGGLMALAGTHALAILERIGNDNRKREFYLTDAVEIARGMKLDVV
                     AVEVEEDDVRGINTKAQLAEAESVAQQRLRKSALDAGVTLVAPETVFLSADTKFGKDV
                     VVEPYVVFGEKVTVEDGAVIHSFSHIAGAHIGRGASVGPYARLRPGARLGDGARIGNF
                     VEVKEAVIEAGAKANHLSYIGDAFVGANANIGAGTITCNYDGTAKHRTEIGEGAFIGS
                     NSALVAPVRIGQRAYIGSGSVITANVPDDALALGRGRQVIKEGWASRLRGLKSLGKGK
                     AHSRD"
     gene            9705..>10600
                     /locus_tag="VNY79_12795"
     CDS             9705..>10600
                     /locus_tag="VNY79_12795"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495162.1"
                     /note="Catalyzes the first step in hexosamine metabolism,
                     converting fructose-6P into glucosamine-6P using glutamine
                     as a nitrogen source; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate
                     aminotransferase"
                     /protein_id="HWX73371.1"
                     /translation="MCGIIGIIGDGSRPVAPQLVEALKRLEYRGYDSAGVATLERGAL
                     ARRRAEGKLKNLEAKLAREPLAGTIGIGHTRWATHGRPTENNAHPHATDRLAVVHNGI
                     IENFSELRRELEGKGARFATETDSEVIAHLVTDGIKNGLSPVEAVAAALPRLRGAFAL
                     AFLFAGEENLLIGARKGSPLAVGFGEGAMFIGSDAIALAPFTDTVCYLEEGDWVVVTR
                     ENAEVHDAGGKVARRPVLKSQASVMLIDKGNHRHFMAKEIYEQPEVVGHTLAKYLDMT
                     TERVALPMALPFDFGALKRISIA"
BASE COUNT         1808 a         3432 c         3620 g         1740 t
ORIGIN      
        1 ggctcgtcag cttcatgcac tatgatctag gctatatcga cctggagcag aggaccttgc
       61 agaccatcga caatccgttc ggcacgagat tgtcacccat gtcttaggta cgttccgtca
      121 cccatgtctc cgggccggac acggttttat tggtgagccc ggcgggactc gaacccgcga
      181 ccccatgatt aaaagtcacg tgctctaccg actgagctac gggctcacgc gagcgttcag
      241 atagcgaaaa ggcgcttcgg tttccagtct cctgcactcg gcgccgggag gggtcaatcg
      301 cggcgcggcc ggcgttctgc tagactgtgc gcacagcctg gatgccccag caaggatgaa
      361 cgccatgccg atcgtcaacc gcgtcgccga cctgcacgat gaaatcaccg aatggcgccg
      421 cgacctgcac gcccatccgg agcttcagta tgacgtccac cgcaccgcgg ggtcggtgtc
      481 ggaaaggctc aagagcttcg gctgcgacga cgtcgttgcc ggcatcggcc gcaccggcgt
      541 cgtcggcgtc atccgcggcc gcaagccggg cgccaaggtg atcgggatgc gcgccgacat
      601 ggacgctctg ccgatcgagg aggcgacaac tgtcgcctac aaatcgactg tgcccggcaa
      661 gatgcacgcc tgcggccacg acggccacac cgccatgctg ctcggggccg ccaaatatct
      721 tgcggagacg cgcaatttcg ccggcaccgc agtggtcatc ttccagccgg cggaggaggg
      781 cggcgccggc gcccgggcga tgatggacga tggcttattc gaccgcttcg gcatcgagga
      841 ggtcttcggc atgcacaatt atcccggcat gccgatcggc caattcgcca ttcgttccgg
      901 tccgatgatg gcctcgaccg acacgatcgg catcgacctc gagggtgtcg gcgggcacgc
      961 cgcatggccg catttcggcg tcgacacggt gctggtcggg gcgcagatcg tcaaccagct
     1021 gcagtcgatc gtggcccgca acgtcgaccc gctgcaggcc gcggtcatct cgatctgcat
     1081 gttccaggcc gggcacgccg acaacgtcat cccgcagcag gcgaagctcc gcggcaccgc
     1141 gcgtgcgctg tcgccgaaag tccgcgacct gctgcagaag cgggtgcgcg aagtggtcga
     1201 ggggacggcg cgcgcctacg gcgccaaggc ggagctgacc tatacgaccg gctatccggt
     1261 cctggtgaac gaggagctca aaaccgcgtt cgccgccggc gtggcatgcg aggtcgccgg
     1321 caaggacaaa gtcaacaccg attgtgcgcc gctgatgggc gccgaggatt tcgccttcat
     1381 gctgcaggaa cggccgggcg cgttcatcta catcggcaac ggcaacagcg cgcagctgca
     1441 caacccggcc tacgacttca acgacgaggc gatcccggtc ggcacctcct actgggtgcg
     1501 actggcagag accgccctcg cgggctgacg ccgaggctac tgcgccgctt ccacgtggtt
     1561 ctcggcggga accttcggcg gctcggcgat gacctgcgag cgcggcagga gcgcggcggt
     1621 cttggcctcg atccggcgcc agaactcgaa tgagttgagc cgggtgccct cgatcagggc
     1681 gatcgcaacc gcggacagga agggcaggct ctgcaccacg agcacggcgg caaaaatgtt
     1741 gatctcgtgg acctgcttgt aattggtcac gacgagggtc gcggcgccga tgaggaggag
     1801 tgcggcgatc accgcctccc agaaggccgg gaagtcgccc ttgcgggtcg cgccgccctt
     1861 cgccgtacgc aggaagggca ggcgttcctt cagcaccccc gatccgaccg cacgcgcgac
     1921 cgtccattgc atcgccatcg cggcaaacac cgcgccgagc atgtgcacga tgggcacctt
     1981 gacgcgcagg cgatagagcg ccgtgaaatg ggcgactgcg accatgaagg cggcaaggat
     2041 cggcaatgtc aggatgcggt cgggcaccgc gatattggcg aacgcgacca ccggcaccca
     2101 gacgatgttg agcaaggcca cgacgacgcc gatgctgtcg gcgccaagcc agttgagcca
     2161 gccgaggcca tactcgcgct tctgctcgcg cgtcaggccc tcggcccagg gcaaaaggtg
     2221 ctgccagtgc ttgcgcacca gttgcaggcc gccgaacgcc caacggtgcc gttgccgttt
     2281 gtaggcttcg aaagtatccg gaaggagccc gtagccgtag cggtgattgg tgtagtgcgc
     2341 gagccagccg cgctcgagga cggcgaggcc gagatcggtg tcttcgacga tggtgtcgct
     2401 cgaccagccg ccggtgctct cgatcgccgc gcggcgcagc aggcacatcg tgccgtgcat
     2461 gatgatggcg ttgacctcgt tgcgctgaac catgccgata tcgaagaacc cggcatattc
     2521 cgcgttcagc gcgcggtgca tcggcgagcg gtcgccgtcg cgatggtcct gcggcgattg
     2581 caccatgccg acgcgcgcgt cggcgaacag cggcaccaga tccttgagcc aggctggatc
     2641 gaccgcgtag tcggcgtcga ggacgccgat gatctccgca tctgccgcgg tgtgcgccag
     2701 cgccagccgt aaggcgccgg ccttgtaacc ggcgagctct tccaccctga cgaatttgaa
     2761 gcggtcgccg agcacacggc aatgctcttc gaccggccgc cacagggccg gatcgggagt
     2821 attgttgatg accaggacgc attcgaaatt ggcgtagtcg agccgcgcca cggcatcgag
     2881 cgtcgccgtc aacatggccg ccggttcgtt gcaggccggg atgtggatcg acaccttcgg
     2941 aaggaagacc tcgggaacga gcggcggagc gccggcaaaa cggcgcggcg gccggccgaa
     3001 ggcgacggcg gcgatttcgt cgatgcgcgc gagcgcgatg acgaccagcg gtaccaggag
     3061 caggatgccc agagcgagcg cgaaggcggc gcccggcacg aagtagtgcc ccttccagaa
     3121 cgcgacgatg gccgcgaacc acgcgccgac gagattggcc gcggccgcaa gcatgagcgt
     3181 ctgcgtggcc gtggcgccat tgatggtcag gatcggcagg cagaggagga ggccgagaag
     3241 gacggcgaga cccgctcgct tgaggtagtc cggatcggta atggcgccgg tccaggagaa
     3301 cttggcctgg cgcgaggcgt cgaacaggcc ccaataaggg ccgacgccgc cctcgaacgt
     3361 cttccagggc tggtcgatcg cctcgacgat gttgtagtcg atgccatagg cctcggcgcg
     3421 cgcgacgaag tcgcggatga ccatcgcctg ctcgacgcgg ccggggttgg cgtcatggaa
     3481 attgtagcca gcgctcggcc aaccgaactc ggcgatgacg atgcgctttc cggggtgggc
     3541 gcggcgcaac ttgtcgtaga actcgatggt ctggtcgacc gcccgcgaga catccaagcc
     3601 ctcccagtag ggcaggatgt gcgcggcaat gaagtcgacg gccgaggcga gctccggatg
     3661 gtcgatccag actgtccaga tttcacccgt agtaacaggc actgggctcg acctcttcac
     3721 gcgttggatg agctgcatga ggtcggccac gctcatctcc gcccgcaatg tcgtctcgtt
     3781 accgacgact atcgcgttga cgttgttgta acggcgcgcg aggtcgagag cggagcggat
     3841 ttcccgctcg ttgcgctctt ggttcttgtc gatccacgcg ccgaccgtga ccttgaggcc
     3901 gaattccgcg gcgatcggcg ggaccagttc ggcgccgccg gtcgcagaat aagtgcggat
     3961 ggcacgggtg tagggcgcaa tcgccctcag gtcagtgcgg atctgctcga cggtggggcg
     4021 atcgccatag tcgggatgct gcgaggctac gaacggagcg tatgagatgc tggcaagctg
     4081 cccggtgaaa tccggcgccg tctctttggt tcgtagtgaa gcccacaggc cgacatgcac
     4141 gcacgttaca agcgcgagca caacagcgac ggtgcgcatc gaatctaacc acgcgggcaa
     4201 tgaaagaacg ggtccgaaac ctgcccaggg ttcagtgatc ggccgtcggg gtgaggcact
     4261 tatgagcggt gccggtgaat tagcgatcgg acgtggcaaa ttcaagacaa ggaactgaca
     4321 ggcgcgtttt ttgttccctg tgcctccggc gttcggcaag tgcgctgccg gcggcggcgc
     4381 tgcgctagcc tttcggcggc gtattcgccg ccggcggggc aggcggcggc atcgccggcg
     4441 ccgccgggtt gatccagcag gcatggatgc gcccgttcaa gctgtcggcg gccttgggat
     4501 cgatgttgtt gccatgcagg atcaggcagc ggaagctcgc ctggatgtgg gcgctcggac
     4561 agccaaagcg gtcgtagaga tcgagatgcc ggaaggcggt gtcgaggtcg tcgcgccaca
     4621 gcaggttcac gacacggcgg ccgagccaca cgcattcggg attgccggca gccccggtga
     4681 cggcgcgctg ggcctcggcg aactcatcgg ctttctgcgg ttcttttgcc ggttcctgcc
     4741 cggccgccgg aggcttttcc ggcggtttgg gttcattgcc ttgggcgaaa gccaggggag
     4801 tccagaggag ccacgcagct agcgacagcc ctcctgcagc ccgaagcaag cggttggaca
     4861 ttgttcgatt gagttgaaaa accgacacga gccgagagtg acgcttccct ggtctagctg
     4921 attgggcctc gcccggcgtt gtattgtccg ggcgaagccg caatgagaac accccaactg
     4981 cgccgatttg tccagcgtgc atcgcgccgc gaaccgtcgc atcttggcac agcgcgtcgt
     5041 caaggctaat gcgaggcgcg tgtcttcctt gccaaacgca aaggcagtcg gcccggcgct
     5101 tgcgtcattt gcgctcacgg cgctcgcaat cggcatcgtg tggtggtggc tcggcgccgg
     5161 catggcgctg ccgccgtccc cgctcccagc cagggcaaag ctctactgcg tctcctatgc
     5221 gccgttccgc gccgggcagg atcccctggt ggaggggacc cgggtcgagc cctggcagat
     5281 cgaagaggac ctggcgctgc tgtcgaagta cagcaactgc gtgcgcacct attcgatcga
     5341 tgacggcgcc gagagcgtcc ttgccagcgc ccggcggcac gggctgaagg tgctgcacgg
     5401 cgtctggctc tccaacaagg cggacaagaa ccggcggcag atcgcgacca cggccgcgct
     5461 cgccaaggaa tatgccgacg tcatcagcgc cgtcattgtc ggcaacgaag tgctgctgcg
     5521 cggggagatg tcggcgacgg acctcatggc cgcgatccgc gaggtcaagg cgcaggtggc
     5581 aaagccggtc acctacgccg acgtctggga atactggctg cgctatgccg acgtgcgcaa
     5641 cgccgtcgat ttcgtcacga tccatattct gccgtactgg gaggattttc cgatcccggc
     5701 ctcgcttgcg gccgcccacg tcgccgcgat ccacgcgcgg gtcgcggccg ccattcccgg
     5761 caaggacatc ctcatcggtg aattcggctg gccgagcgcg gggcgcatgc gcgagcgcgc
     5821 gcggccttcg ccctggaacc aggcgcgcgt catcagcgaa acgctggctc tcgccgagcg
     5881 cgagcacttc aaggtcaata tcatcgaggc gttcgatcag ccctggaagc gtgcgctcga
     5941 aggggcggtc ggtggctact ggggcatttt cgaccgcgcg acggacgggc tcaaattccg
     6001 cttcggcggc acggtttccg agcatccgca gtggccttgg caggcggccg ccggcatcgc
     6061 gcttgcggcc ctttcctttg ccggcgcctt tgctgccggg cgcactaagg gcatttcccc
     6121 ttatctgtgg ccggaagtag cggcgctgtc gttccttccc gccgtgatgt tcggctggac
     6181 cattgagacg gttccggtcg aaagcttcag cgtcggcagt tggctccgct cgctcgcctt
     6241 cgccgcgact gccggagccg ccccggtcgt ctgcgccata gcctgcgccg cgggtcgcgc
     6301 cgttccggcg ttctcgtcat ttctcgggcc cggccgcaag cgccctgacg gcctcgattg
     6361 ggtgctcggc ggcagcttga tcgcgctgat gctggtttcc atcgaggccg cgctcggcct
     6421 ggtgttcgac ccgcgctacc gcgacatcgc cttcgcgcca ctgacggccg cggcgctgcc
     6481 gttcctggtg gtcttggtgt cgacgccgcg gccggcggga gcgcgcgcaa tggccgagac
     6541 ggtcggcgcc gcggtcctgg cgctgtcgag cggctacgtc ctgttcaacg aaggctttgc
     6601 caactggcag tcggtctggt tctgcgcggg actgttcggg cttgccttca ttctggcact
     6661 ggcgcgggac gcgccaagcc caggatgagg attccgaccg cgagcgccga cagatcggcg
     6721 ttgtgcagca ccaccccgaa agccgccgcc gcaagcgcga cggcaacgag caccagcgac
     6781 ggccgcacga gattgagcaa ggcggcgaca agtgcggcgc cgccgaacac ctgatgattg
     6841 aagagcacga tggtcagccg aaacgtccgg cacagccagg tatcgagccc ggcctggcag
     6901 gcgagcgaca cggtgccgtt ctcgatcgca aggtagcgca gatagagggc ctcccccacg
     6961 gagaggaagc cgatcaccag cagccagttc agctggcgtg cggtcggccg aaacagcgaa
     7021 cggggctggt cgatggcggt cacgccgacg atcatagtcg gcgagctact ggagcgcgag
     7081 gtgctggccg tcaaagttcg tcggctgaca ggacacgcgg aacgacgcca gtgtggcgca
     7141 caattcgact gccgctccgg ggctcggcag cggcccgacg acgagccgca gctcggcacg
     7201 cctcgatcga gggatttcct tgagcgtggc gaccgcctgc agacccacga agagctgcgg
     7261 gtgagccgag cgcgtcccgg accagcgcgc cttcagcgtc tgaatggaga cggcgctgcc
     7321 gaggtccacg cgtatgccgc cgattgcggc ccctcagccg cgcccgtcag ggctgacgtc
     7381 gcttgcctcg gcgatggcgc atcgaaaatg acgggaagcc gggacggcaa tccggcgaac
     7441 ggcggcacca ccggtgcggc ggcagccgtg ctggacgcca tccccgcttc tggcagatcg
     7501 ccggccgacc aaggcggcgg tacggcggcg ctatttgcgg ccggggcatc cgctccgagc
     7561 gcatccgctt cgggcgcgtt cgctgccggg gcattcgcgg ttttgagatc gcccgtctga
     7621 gtcgctccct cggcggctgg aggcgtggct ttctcgcttt gtcccgcgat tgcaccagtg
     7681 atgtcaccca ggctgtgctc gagcgcagca agacgcgcta tcaaccggtc acggtcctcg
     7741 gtcagaccac gcaccgcctg agtcagctgc cgggcagcgg actccgcgtc gaactggcgc
     7801 ggcgcgccgt gggttgcgcc tggcgtcgtg gcgatccgtt gcgaaccggc atcactccga
     7861 ctcgtgagaa tggcgacgag cagggcggtc gcagccgtcg tgccccacag cgcgattcgg
     7921 cataggctct gcatggtgaa tgcgggctgc gtaacctttt tggccgcggc attcgcggtc
     7981 tgcgcctgac ctgccatgct gccgctccga gcctcctaaa agcgaatcga tggtaaaaat
     8041 aacagattcg cgtttgcgcc actgttgctt agcgaaaagc atggcgacgc gaggcggtcg
     8101 ccagccgttt gggcgcggca ccacgatcgc gactttcagc cgccaaccgg ctatgagagc
     8161 gcccgcggag ttgctcgatg aaggctcgga cttgtctggc gatcgtgctc gcggccggcg
     8221 agggcacccg catgcgctct gccgttccca aggtcttgca tgccatcgcc gggcgcccgc
     8281 tgatcgccca tctgcttgcc gccatcgccg aagccgggat caccgacacc gcagtcgtca
     8341 ttggtcccgg gcaagaggcc gtcactgccg cagcgcggcg cgtgctgccc catgccgctg
     8401 cctttgtgca gcacgagcag cgcggaacgg cccacgcggc gctcgcggcc aaggcggcca
     8461 tcacgcggct tgaggccgat gacgtcctca tcgtctacgg cgataccccg ctcgtgcggc
     8521 cggcaacgct gaagcggctc cgcgcgccgt tggccgcggg cgcggcgctc gccgtgctcg
     8581 gattccgcgc cgccgacccg ttcggctacg gccggctcgt cgtcgccgac ggcaagctcg
     8641 tcgccatccg cgaggaagcc gatgcaagcg ccggcgagcg cgcgatcaat ctctgcaacg
     8701 gcgggctgat ggcgctcgcc ggaactcatg cgctggcgat cctggagcgg atcggcaacg
     8761 acaatcgcaa acgcgaattc tatctgaccg atgcggtcga gatcgcccgc ggcatgaagc
     8821 tcgacgtcgt ggcggtcgaa gtcgaggagg acgacgtgcg cggcatcaac accaaagccc
     8881 aactcgccga agcggagagc gtagcacagc agcgcctgcg caagtcggcg ctcgacgccg
     8941 gcgtcacgct cgttgcgccg gagacggtgt ttctcagcgc cgacaccaaa ttcggcaagg
     9001 acgtggtggt cgagccctac gtggtgttcg gcgagaaggt taccgtcgag gacggcgcgg
     9061 tgatccattc attctcgcac atcgccggcg cccatatcgg caggggcgcg tcggtcggac
     9121 cgtacgccag gctgcggccg ggggcgcggc tcggcgacgg cgcgcgcatc ggcaacttcg
     9181 tcgaggtcaa ggaagcggtg atcgaagccg gcgccaaggc caatcacctg agctatatcg
     9241 gcgacgcctt cgtcggcgcc aacgccaaca tcggcgccgg caccatcacc tgcaactacg
     9301 acggcaccgc gaagcatcgc accgagatcg gcgaaggcgc cttcatcggc tctaactcgg
     9361 cgctggtcgc tccagtgcgc atcggccagc gcgcttatat cggttccggc tcggtgatta
     9421 ccgccaacgt cccggacgac gcgctggcgc tcgggcgcgg gcggcaggtc attaaggaag
     9481 gttgggcgtc gcgcttgcgc gggctcaaat cgctcggcaa aggaaaggcg cattcgcgcg
     9541 attgaacgca gcacgaacga cgccgcgccg gtcgatttgc aaactccggg tcgaaacgcc
     9601 ggtgacggaa cgaaaactat tttgattttg ttttctcgga tggctgcgct ttaaccgtta
     9661 acggctggac ccgcggcgcg gggcctgagg agcatccaac ccggatgtgc ggcatcatcg
     9721 ggatcatcgg cgacggcagc cggccggttg cgccgcagct cgtcgaagcg ctcaagcgcc
     9781 tcgagtaccg cggctacgat tcggccgggg tggcgacgct ggagcgcggc gcgctggcgc
     9841 ggcggcgtgc tgaaggcaag ctcaagaacc tggaagcaaa gctcgcgcgc gaaccgctcg
     9901 ccggcacgat cggcatcggc cacacccgct gggcaacgca cgggcgtccg accgagaaca
     9961 acgctcatcc gcacgcgacc gaccggcttg ccgtcgtgca caacggcatc atcgagaact
    10021 tcagcgagtt gcgccgcgag ctggaaggga agggcgccag gtttgcgacc gagaccgata
    10081 gcgaggttat cgcgcatctg gtcaccgacg ggatcaagaa cgggctgtcg ccggtcgagg
    10141 cggtggccgc cgcattgccg cggttgcggg gggcttttgc gctcgccttc ctcttcgccg
    10201 gcgaggagaa tttgctgatt ggcgcgcgca aaggctcgcc gctcgcggtc ggtttcggcg
    10261 agggcgcgat gttcatcggc tccgacgcga ttgcgctcgc gcccttcaca gacaccgtct
    10321 gctatctcga ggagggcgac tgggtggtcg tcacccgtga gaatgccgag gttcacgatg
    10381 ccgggggcaa ggtggcgcgg cgcccggtgc tcaagtcgca agcttcggtg atgctcatcg
    10441 acaagggcaa tcaccgccac ttcatggcca aggagatcta cgagcagccg gaagtggtcg
    10501 gccacacgct ggcgaaatac ctcgacatga cgacggaacg cgtcgcgctg ccgatggcgc
    10561 tgccgttcga tttcggcgcg ctcaagcgca tttcgatcgc
//
LOCUS       DATMQB010000442         9450 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2382730, whole genome shotgun sequence.
ACCESSION   DATMQB010000442 DATMQB010000000
VERSION     DATMQB010000442.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9450)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9450)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9450
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2382730"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..315
                     /locus_tag="VNY79_12800"
     CDS             <1..315
                     /locus_tag="VNY79_12800"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73372.1"
                     /translation="VGELAHGQRQLVEIGTVLANKPWLVLLDEPAAGLTNAETDRLVA
                     IIKRINQTATLIVVDHDMHFVRTLDSWITVFHQGAILVEGHADKVLTDPSVREVYLGN
                     RA"
     gene            312..857
                     /locus_tag="VNY79_12805"
                     /pseudo
     CDS             312..857
                     /locus_tag="VNY79_12805"
                     /inference="COORDINATES: protein motif:HMM:NF012235.4"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
     gene            1293..2816
                     /locus_tag="VNY79_12810"
     CDS             1293..2816
                     /locus_tag="VNY79_12810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009030224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HWX73373.1"
                     /translation="MSTVRRPTLEQMHDVVGSLHLSMSQGEVAEYLEVLEGTFQAYDR
                     VNELPDYLPPVRYPRTPGYRPGANENPLNAWAVKTEVRGAAHGPLSGKRVVLKDNICL
                     AGVPMMNGASTLEGYVPDIDATVVTRILDAGGTIVGKAHCEYFCLSGGSHTSALGPVH
                     NPYKYGYSAGGSSSGCGALVGAGEVEMAIGGDQGGSIRMPASYSGCYGMKATHGLVPY
                     TGVMPIEATIDHTGPMTATVGDNALLLEVIAGADGLDPRQYDVQVEKYSYTTGLGRGV
                     SGMRIAMVTESFGWPSSEPDVDAKVREAAERLRAAGAIVEPVSIPMHRDGGAIWTPIA
                     LEGLMAQMMHGNGMGFNWKGLYTTSLLDAHANWRSRADELSRTLKISMLAGEYFIKHH
                     RGHFYAKAQNLGRLLRKTYDDVLARHDLLLMPTLPMKATPLPPANAPLALWCQRGFEM
                     LPNTCPFDVTGHPAMNIPCGMSDGLPIGMMLVGKHYAETTIYRAAHAFEQLGDWRNF"
     gene            2970..4589
                     /locus_tag="VNY79_12815"
     CDS             2970..4589
                     /locus_tag="VNY79_12815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012332188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HWX73374.1"
                     /translation="MTIPQLLDRACARFSSRPAAIFADAHLRLSWYDLRARADDVAAG
                     LLALGIGRGDRVGIWAPNRAEWLYVQFGTARIGAILVNINPAYRASELEHALNKVGCK
                     ALVLARRHKSSDYVDMLRTLAPELDDGAGTLRAARLPHLRHVVVLGEGPLPRAARSFA
                     ALVSLAGPGHRSRLEALSAALDPDGAINIQFTSGTTGSPKGATLSHFNIVNNARYSAK
                     SMALTAEDRLCIPVPLYHCFGMVLGVLCCTAVGATMVFPGESFDAEATLSAIARYRCT
                     ALHGVPTMFIAELEHPNFSSYDLSTLRTGIMAGAPCSVETMRQVAQRMHMGEVTIGYG
                     MTETSPISFQSRTDDPLERRVATVGRIHPHVEVKIVDAAGDVVPLGASGELCTRGYSV
                     MRGYWEDRERTAEAIDASGWMHSGDLATIDGQGYCSIVGRLKDMLIRGGENIYPREVE
                     EFLIRHPQVQAAQVFGVPDQRLGEEVCAFIVLKPGQSATAEDIRLFCQGQIAHHKVPR
                     HIRFVTEFPMTATGKPQKFVMREQIMAELGA"
     gene            complement(4641..6011)
                     /locus_tag="VNY79_12820"
     CDS             complement(4641..6011)
                     /locus_tag="VNY79_12820"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HWX73375.1"
                     /translation="MRQMKLIGFLQAQNCSNYPASWRHPLAQANWASREYYEQIGRTL
                     EAGKFHLAFFDDRLAIPDRLGDDFSETVRHGIRAAKLDPGAVALTMGLATEKLGIGVT
                     YSTTYYEPFHVARVFATVDLLLKGRAAWNVVTSLNDSEAANFGLAKHLEHDLRYDRAD
                     EFMEVVLGHWDTWEDDAIVFDRESGTFADPGKIHRLDHKGRFFSSRGPFTVPRSPQGH
                     PVIIQAGQSGRGKEFAARWGELLFVIHPHLATAQKHYRELKESPAGRGREITIAAAFY
                     PVVAETQAEAEDRFALVDGLAKPIDSLVLLSEVLNFDFAAKAPDEPLSDEELRAMTGI
                     QAVRDRVMQFSGKPNPTVKDFLAYSGRGTLRELPTFVGTPTKIADQMEAWFAGGACDG
                     FVIAATHVPGTYEDFVRLVVPELQRRRLFQREYQGDTLRANLGLPRPQRGYLLQRDPA
                     KLEALG"
     gene            6277..7254
                     /locus_tag="VNY79_12825"
     CDS             6277..7254
                     /locus_tag="VNY79_12825"
                     /inference="COORDINATES: protein motif:HMM:NF016292.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX73376.1"
                     /translation="MRRRELLQVFGGALAWPLAARAEQPGPVIGLLHAASARYFAQLA
                     PSFAQGLKESGYTPGQNVAIEYRWAEGHYDRLPALAAELVARQVAVIVAGGGTTPAKA
                     AKAATSTIPIVFISAADPVKAGIVDSLNRPGGNVTGVSLIGSALEAKKLGLLHEVAPG
                     ASTVAALINPNYADAQMQVDEVAAAAARVGVELVTLRAGNAAEIDTAFATLLERGAGA
                     LLVGEDVEFAALRRQIVALAARHAIPTIYFQKEFVAAGGLISYGPHFTDGYRQAGIYV
                     SRILKGEKPAELPIVQPTKFEMVINLKTAKALGVEIPPMLLATADEVIE"
     gene            7459..8889
                     /locus_tag="VNY79_12830"
     CDS             7459..8889
                     /locus_tag="VNY79_12830"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HWX73377.1"
                     /translation="MIAAAGAIGFAIGIAGFARLGLDGIFRILNDLPAAAVGAGLSVT
                     LALAGLAIAAVFAVVRERQYGGAATVAIDNMTQGLSMFDGAARLVLCNSRYIEMSQLP
                     PENFREGTPLREILIRRARDGKFAGDPDQYVADALKQAAAGRTETKTFELADGRTISL
                     IVRPLSDGGWVSTHTDVTQQRLAERERDSLRQREERRAAVDAAIADFRARIESMLTTV
                     GQSAAAMKAAAKSLLATSDHTLQRTEGAVHGSNEASANVETVAAAAEELSASIKEISR
                     QLVQANEIVRSATAHATVTNDDIAALARVAQRIGDVVKLIQDIAEQTNLLALNATIEA
                     ARAGAAGRGFAVVASEVKSLAVQTAKATEEITREISLVQGSTEAAVTAIGAITRRMQE
                     INAHTSEVAGAVEQQELATGQISHNVASAAAGSKAVVAALGDVATGVTQTRSSAQTVL
                     AASEEVEKATVKLRAEVEGFLSTVAA"
     gene            complement(9228..>9450)
                     /locus_tag="VNY79_12835"
     CDS             complement(9228..>9450)
                     /locus_tag="VNY79_12835"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73378.1"
                     /translation="YTCADFHSNCHAAPYRSCDSAHFDDHQLHDDLQFAGGQLSNSLS
                     YPRRVVWNGVVWNHDIERYGKYSVFVNVL"
BASE COUNT         1615 a         3138 c         3103 g         1594 t
ORIGIN      
        1 gtgggcgagc tcgcgcacgg gcaacgccaa ttggtggaga tcggcaccgt tctcgccaac
       61 aagccgtggc tcgttctgct cgacgagccc gcggccggcc tcaccaatgc cgagaccgac
      121 cggctcgtcg ccatcatcaa gaggatcaac cagacggcga cgctgatcgt cgtcgatcac
      181 gacatgcatt tcgtgcgcac gctcgattct tggattaccg tgttccacca gggcgccatt
      241 ctcgtcgagg gtcacgccga caaggtcctc actgatccga gcgtgcgcga agtctatctg
      301 ggaaaccgcg catgagcatt cgccagacgg acgatgcgga tagccgtgag gcggttcgcg
      361 gcgaggatgc cgataccgac ggcgtagtgc tcgagatcac cgacctgcat ggcggctacg
      421 gggaagtgcc ggtgctgcgc ggcgtgtcgt tgcagctcca cgagggcgaa gccatcggca
      481 tcgtcggcca caacggcatg ggcaagacga cgctgctgcg cacgatcatg ggcttattgc
      541 cgtcaaccgg cggcaagatc gtggtcgacg gcgtcgatgt gaccacgtgg gcggcccatg
      601 aaagaagccg cctcggcatc gcctacgtgc cgcaaggtcg cggcatcctc ccaggcctga
      661 gcgcgcacga gaacctgcgc ctcgcttgga ccccggactc aggggagacc gaagagcgtg
      721 cgatcgagcg cgtggtcggg attttcccgc gcctgaaccg gcttctgaat cggcgcgggg
      781 gcgcattgtc gggcggcgag cagcagatac tggcgctcgc gcgcgcgctc gtgtcgctgc
      841 cgtggctgct cgttctcgac gagccctccg agggcatcca gccgtccatc gtccaggaga
      901 tcggcgaact tctggcggcg ctgcgcgaaa agcaccgtct ctccatgctc atcgtcgagc
      961 agaacctcga actcgtgctc gatgtggcca gtcgcatcgt gctggtcgag cgcggccgca
     1021 ttatccgcga actcgactcc agtgcagtgc gcgccggcgc cattgccgat ctggtcggtc
     1081 tcggcaattc gcggctggcg ccgccgccgg ccacggcgag agccccgcgt acgaacggtc
     1141 cgctgcccct ctcttcgcca agcaacggcg cggtccgtcc gccggcgagc ggcgggcggg
     1201 cgccggtttc ggcggcgaac ggaccacgcg tcgcgccatc gcgaaaatcc gcgcctgccg
     1261 cgccggccag cgccacatca ttagggggtc ccatgtccac cgtcagacgg cccacgctcg
     1321 aacagatgca cgacgtcgtc ggttcattgc acttgagcat gtcgcaaggc gaagtcgccg
     1381 aatacctgga ggtgctggaa gggaccttcc aggcctacga tcgggtcaat gagctgcccg
     1441 actatctgcc gccggtgcgc tacccacgca cacccggcta ccggccgggc gccaacgaaa
     1501 acccgctcaa tgcctgggcg gtcaagaccg aagtgcgcgg cgccgcgcac ggaccgctat
     1561 cgggcaagcg cgtcgtcctc aaggacaata tctgcctcgc cggcgtgccg atgatgaacg
     1621 gcgcctcgac gctcgaaggc tacgtgcccg acatcgatgc gacggtcgtt acccgcatcc
     1681 tcgacgccgg cggcaccatc gtcggcaagg cgcattgcga gtatttctgc ctgtccggcg
     1741 gcagccacac ctcggcgctg ggtccggtgc acaaccctta caaatacggc tactccgccg
     1801 gcggctcctc gtcgggctgc ggggcgctcg tcggcgccgg cgaggtcgag atggcgatcg
     1861 gcggcgacca gggcggctcg atccgcatgc cggcgtccta ttccggctgc tacggcatga
     1921 aggccacgca cggtctcgtc ccctataccg gcgtcatgcc catcgaggcc acgatcgacc
     1981 ataccggacc gatgacggcg accgtcggcg acaacgcgct gctcttggaa gtgatcgccg
     2041 gagccgacgg cctcgatccg cgccagtatg acgtgcaggt cgagaagtac agctatacga
     2101 ccgggctcgg ccgcggcgtc tccggcatgc gcatcgccat ggtcaccgag agcttcggct
     2161 ggccgtcgag cgaacccgat gtcgacgcca aggtgcgcga ggccgcggag cgcctgcgcg
     2221 ccgccggagc gatcgtcgag ccggtatcga ttccgatgca ccgcgacggc ggcgccatct
     2281 ggacgccgat tgcgctcgaa ggcctgatgg cgcagatgat gcacggcaac ggcatgggct
     2341 ttaactggaa gggtctctac acgaccagcc tgcttgacgc ccacgccaac tggcgctccc
     2401 gcgccgacga gctttcacgt acgctgaaaa tatcgatgct cgccggcgag tatttcatca
     2461 agcatcaccg cggccatttc tacgccaagg cgcagaacct cgggcggctg ctgcgcaaga
     2521 cctacgacga cgtgctggcg cgccacgatc tgcttttgat gccgactttg ccgatgaagg
     2581 cgacgccgct gccgccggcc aatgcgccgc tcgcgttgtg gtgccagcgc gggttcgaga
     2641 tgctgccgaa cacctgtcct ttcgacgtga ccggccatcc ggccatgaac attccctgtg
     2701 gcatgagcga tgggttgccg atcggcatga tgttggtcgg caagcactac gcagagacca
     2761 cgatctaccg tgcggcgcat gccttcgagc aactcggaga ctggcggaat ttctgaccta
     2821 tagtcggccc gggacggagg ccgccgatgc cggcaaacag ccacaacccg ttcagctcgg
     2881 atttcttgcg cggcaatgcc gaagaccggc tgcggccgcc gggaacgcgt tcctacgttg
     2941 ccggcgcgac cgacgatccg ctgaagttca tgaccatccc gcaattgctg gaccgggcct
     3001 gcgcccgctt cagcagccgt ccggcggcga tctttgccga cgcccacctg cggctgtcgt
     3061 ggtacgacct gcgggcgcgc gcggacgacg ttgctgccgg cctcctcgcg ctcggcatcg
     3121 gtcgcggcga ccgcgtcggc atctgggcgc ccaatcgcgc cgagtggctc tacgtgcaat
     3181 tcggtacagc gcgtatcggc gccatcctgg tcaacatcaa tcccgcctat cgcgcctcag
     3241 agctcgaaca cgcgctcaac aaggttggct gcaaggcgct ggtgctcgcc cgccgccaca
     3301 agtcgagcga ctatgtcgac atgctgcgca cgctcgctcc cgagctcgac gacggcgcgg
     3361 gaacgttgcg ggcggcgcgg cttccgcacc tgcgacacgt cgtcgtgctc ggcgaggggc
     3421 cgctgccgcg ggccgcccgg tcgttcgccg ccctcgtctc gctcgccggt cccggccacc
     3481 gtagccgcct cgaggcactg tcggcggcgc tcgatcccga cggtgcgatc aacatccagt
     3541 tcaccagcgg cacgaccggg tcgcccaagg gggcgacgct ctcccatttc aacatcgtca
     3601 acaatgcgcg ctatagcgcg aaatcaatgg cgctcaccgc cgaagaccgg ctttgcattc
     3661 cggtgccgct ctaccactgc ttcggcatgg tgctcggcgt gctgtgctgt acagccgtcg
     3721 gcgccaccat ggtgtttccc ggcgaaagct tcgatgccga ggcgactctg tccgccatcg
     3781 cgcgctaccg ctgcacggcg ctccacggcg tgccgacgat gttcatcgcc gagctcgagc
     3841 atccgaattt ctcgagctac gacctgtcca cgctccgcac cggcatcatg gcgggcgcgc
     3901 cgtgctcggt cgagacgatg cgccaggttg cccagcgcat gcatatgggc gaggtcacca
     3961 tcggctacgg catgacggaa acgagcccga tctcgttcca gtcgcgcacc gacgacccgc
     4021 tcgagcggcg ggtcgcgacc gtcggccgca tccacccgca cgtcgaggtc aagatcgtgg
     4081 acgcggcggg cgacgtcgta ccgctcggag cctccggcga attgtgcacc cgcggctaca
     4141 gcgtgatgcg cggctactgg gaagatcgcg aacgcacggc cgaggcgatc gatgcctcgg
     4201 gctggatgca ttcgggcgat ctcgcgacca tcgacgggca gggctattgc agcatcgtcg
     4261 gccgcctcaa ggacatgctc atccgcggcg gcgaaaacat ctacccgcgc gaggttgagg
     4321 aatttctgat ccgccatccg caggttcagg ccgcccaggt cttcggcgta cccgatcagc
     4381 gcctcggcga ggaggtttgc gcgttcatcg tgctcaaacc cggccagtcg gcgacggcgg
     4441 aagacatacg cctcttctgt cagggacaga tcgcccacca caaggtgccg cggcacatcc
     4501 gcttcgtgac cgaattcccg atgaccgcga ccggcaagcc gcagaaattc gtgatgcgcg
     4561 agcagatcat ggcggagctc ggggcgtgaa gcggccggcg ccggcgctgc gccaggcgtc
     4621 gccggttgcg gccgggcgcg tcatccgagc gcctcgagct ttgccggatc acgttggagc
     4681 agatagccac gctgcggtcg cggcaggccc aaattggcgc gcagcgtatc gccctgatac
     4741 tcgcgctgga acaggcggcg ccgctgcagc tcgggcacga cgagccgcac gaagtcctcg
     4801 tacgttcccg gcacgtgagt cgcggcaatg acaaatccgt cgcaggcgcc gccggcaaac
     4861 catgcttcca tctgatcggc gatcttggtc ggggtgccga cgaaggtcgg gagttcgcgc
     4921 agcgtgccgc gaccgctgta tgcgaggaaa tccttgactg tcggattcgg cttgccgctg
     4981 aactgcatca cgcggtcgcg aaccgcctga atcccggtca tcgcgcgcag ctcttcgtcc
     5041 gacagcggct catccggcgc tttcgcggcg aaatcgaagt tgagcacttc cgaaaggagc
     5101 acgagcgagt cgatcggctt ggcaagcccg tcgacgaggg caaagcggtc ttcggcttcg
     5161 gcctgggttt ccgcgacgac cggatagaag gcggccgcga tggtgatctc ccggccccgg
     5221 ccggccggtg actccttcag ctcgcgatag tgtttctgcg cggttgcgag atgggggtgg
     5281 atgacgaaaa gcaattcgcc ccagcgtgcc gcaaattcct tgccccgccc gctctgcccg
     5341 gcttggatga tgaccggatg gccctgcggc gagcgcggca cggtgaacgg tccgcgcgaa
     5401 ctgaagaacc ttcccttgtg atcgaggcga tggatcttgc cgggatcggc gaaggtgcca
     5461 ctctcgcgat cgaacacgat cgcgtcgtcc tcccacgtgt cccagtgccc gagcacgacc
     5521 tccatgaatt cgtccgcgcg gtcgtagcgc agatcgtgtt cgagatgctt ggcgaggccg
     5581 aagttggcgg cctccgagtc gttcaacgag gtgacgacgt tccaggcagc ccggcctttg
     5641 agcagcaggt cgaccgtggc aaacacgcgc gcgacgtgga acggttcgta gtaggtcgtc
     5701 gaataggtca ccccgatgcc gagtttctcg gtggcgaggc ccatggtgag agcgaccgcc
     5761 cccggatcga gctttgccgc gcgtatgccg tgccgcaccg tctcgctgaa gtcatcgccg
     5821 agacgatccg gaatggcgag ccggtcatcg aagaaggcaa gatgaaattt gccggcttcg
     5881 agtgtgcggc cgatctgttc ataatattcg cgcgacgccc aattcgcctg tgccagcgga
     5941 tggcgccacg acgccgggta gttcgaacaa ttctgcgcct gcaggaagcc gatcagcttc
     6001 atttgcctca tcgctgtttc ctcccggagg ccgacgggcg gtgcatggct tctgccgctg
     6061 ccttgccgcc ccggatcgcg gcgaaaaaat tacggcaagc tccgcgagaa cgccaggagc
     6121 cccgcgccat ccggcgtcgt ttggacttgc acgcggcccc aagcgtgccg tgcggctctc
     6181 cacgcgacac ctcgttccgt cgcgcgcgtc aacccccttc agggtcctcg aattgacggt
     6241 tacgatgctc gtgcgtgtcg ggctcgagag gtgcgcatgc ggcgtcgcga attgctgcag
     6301 gtgttcggcg gggcgctggc gtggccgctc gccgcgcgcg ccgagcagcc cggaccggtg
     6361 atcggtctgc ttcacgccgc gtcggcgagg tattttgcgc aactcgcccc gtcattcgcg
     6421 caaggcctga aagagtccgg gtacactccg ggccagaacg tcgcgatcga ataccgctgg
     6481 gcggaaggtc actatgaccg cctgccggcc ttggcggcgg aattggttgc tcgtcaggtc
     6541 gcggtgatcg tcgccggcgg cggtaccact ccggcgaagg cagcaaaggc ggcgacgtcc
     6601 accatcccga tcgtgttcat cagcgctgcc gatccggtca aggccggcat cgtcgacagc
     6661 ctcaatcgtc ctggcggcaa tgtcaccggc gtcagcctga tcggctcggc cttggaagcc
     6721 aagaaattgg gcctgctgca cgaagtggcg cccggcgctt cgaccgtcgc cgcgctcatc
     6781 aacccgaact atgcggacgc gcaaatgcag gtcgacgagg ttgcggccgc ggcggcccgc
     6841 gtcggcgttg agttggtcac gctccgcgcc ggcaacgcag ccgagatcga caccgccttc
     6901 gcgacactcc ttgaacgcgg cgccggcgcg ctgctggtcg gcgaggacgt cgagtttgcc
     6961 gcgctgagac ggcagatcgt ggcgctggcg gcgcgtcacg ccataccgac aatctacttc
     7021 cagaaggagt tcgtcgcggc cggcggactg atctcctatg ggccgcattt taccgacggc
     7081 taccggcagg ccggcatcta cgtgagccgc attctcaaag gcgaaaaacc cgccgagttg
     7141 ccgatcgtgc agccgaccaa attcgagatg gtgatcaacc tcaagaccgc aaaggcgttg
     7201 ggagtcgaga ttccgccgat gctgctcgcc accgccgacg aggtgatcga atagcggctt
     7261 tgtccgccgg cgtttgtatg ggagctggtt cggcgcgctc acacacggaa aggtcctccg
     7321 ccgttaaccg acggcaggcg gtcggtcggc atttattaac gtcaaaacaa tatttgcccg
     7381 aatagtctca attcgctcgc acggacgccg ccgatgcttc gaggtcccac tctgactaac
     7441 cccgttcgcc gatggggcgt gatcgccgcc gcgggcgcca tcggtttcgc gatcggcatc
     7501 gccggttttg cgcggctcgg cctcgacgga atcttccgaa tattgaacga tctccccgct
     7561 gcggcggtgg gtgccggcct atccgtgacg ctggcgcttg ccggtttggc gattgccgct
     7621 gtcttcgccg ttgtccggga acgccagtac ggcggggcgg caacggtcgc gatcgacaac
     7681 atgacccagg ggctgagcat gtttgacggc gccgcccggc tcgtcctctg caatagccgc
     7741 tacatcgaaa tgtcacagct gccgcccgag aatttccgcg aggggacgcc gctgcgcgag
     7801 atccttattc gccgcgcgcg ggacggcaaa ttcgcgggcg accccgatca atatgtcgcc
     7861 gacgccctca aacaagcggc cgcgggccgt accgagacaa agaccttcga gctggcggac
     7921 ggccgcacga tttcgttgat cgtgcgacca ttgtccgacg gcggctgggt atcgacgcat
     7981 accgacgtta cgcagcagcg gctcgcggag cgggagcgcg actcgctgcg tcaacgcgag
     8041 gagcgccgcg ccgccgtcga tgcggcgatc gccgattttc gcgcccgcat cgagagcatg
     8101 ctcacgacgg tcgggcagag tgccgcggcc atgaaggccg cggccaagtc gttgctggcg
     8161 acatcagacc atacgttgca gaggaccgag ggagcggtgc acggctccaa cgaggcatcg
     8221 gccaacgtcg agaccgtcgc tgcggcggcc gaggaactct ccgcttcgat caaggagatc
     8281 agccgccagc tcgtgcaggc gaacgaaatc gtgcgcagcg ccaccgctca cgcgaccgtc
     8341 acgaacgacg acatcgcagc gcttgcccgc gtcgcgcaga ggatcggcga cgtggtgaaa
     8401 ctcattcaag acatcgccga gcagacgaat cttctggcgc tcaacgccac gatcgaggcg
     8461 gcgcgcgccg gcgccgccgg ccgcggcttt gccgtggtag cttcggaggt gaagtcgctg
     8521 gcggtgcaga cggcgaaggc gactgaggaa atcacccggg agatttcttt agtccagggc
     8581 tcgaccgagg ctgcggtcac cgcgatcggc gcgatcacgc gccggatgca ggagatcaat
     8641 gcccacactt ccgaggttgc cggcgccgtc gagcagcagg aattggcgac cgggcagatt
     8701 tcgcacaacg tcgccagtgc cgccgcgggc agcaaggcgg tggtcgccgc gctgggcgac
     8761 gtcgcgaccg gggtgacgca gacgcgcagc tcggcgcaga ccgtccttgc cgcttccgag
     8821 gaggtcgaga aggcgaccgt gaaactccgt gcggaagtcg agggcttcct cagcaccgtt
     8881 gccgcttagt acgcaacgtc ccgcataagc cgctatgcca cgcggatcgg aggctgcgcg
     8941 gcggccttcg cgtgcgcgtc gcgtgagcgg cgcctgccta tcatgccttg cctctgacag
     9001 cttcggcagc ttctcggtgt tgccggcgat gcgcagggtc ccgtcgcagg tgagcagctt
     9061 ggccgccgct cggcgccccg ctcatcttcg aaatagacat acgccagcgc gcccattggc
     9121 gtcgctccac ggcgggggga cgcggcggtt catgcccgcg cgggcccaat ttaagctatc
     9181 gcgaagggga aacctgcgcg catacagtct gacaggtgag atgggtgcta gagcacgtta
     9241 acaaacacgc tgtacttccc gtagcgttcg atgtcgtggt tccagacgac gccgttccag
     9301 acgacacggc ggggataaga caggctgttc gacagttggc cacctgcgaa ttgcaagtca
     9361 tcatgcaatt ggtggtcgtc gaagtgagcg gagtcgcaag acctgtaagg ggcggcgtga
     9421 cagttggaat ggaagtctgc gcaagtgtat
//
LOCUS       DATMQB010000443         5151 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3329896, whole genome shotgun sequence.
ACCESSION   DATMQB010000443 DATMQB010000000
VERSION     DATMQB010000443.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5151)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5151)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5151
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3329896"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(5..826)
                     /gene="fabI"
                     /locus_tag="VNY79_12840"
     CDS             complement(5..826)
                     /gene="fabI"
                     /locus_tag="VNY79_12840"
                     /EC_number="1.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009025942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HWX73379.1"
                     /translation="MPGLMHGKRGLIMGVANDHSIAWGIARTLAAHEAKLAFTYQGDA
                     LAKRVKPLAASVGADLILPCDVEDIASVDQVFAEIGRAWGMLDFLVHAIAFSDKTQLT
                     GRYSDTTRDNFLRTMLISCFAFTEAAKRAAALMPDGGAMLTLTYNGGERAMPNYNAMG
                     PAKAALEASVRYLAVDFGARKIRVNAISSGPIRTLAGAGIGDARMMFAFQQRHSPLHR
                     GVTLDELGGAALYLLSDLSTGVTGEIHFVDSGYNVIAMPHPEALRGDREGRDDGH"
     gene            complement(830..2047)
                     /gene="fabB"
                     /locus_tag="VNY79_12845"
     CDS             complement(830..2047)
                     /gene="fabB"
                     /locus_tag="VNY79_12845"
                     /EC_number="2.3.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009796638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004315 - 3-oxoacyl-[acyl-carrier-protein]
                     synthase activity [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase I"
                     /protein_id="HWX73380.1"
                     /translation="MRRVVVTGMGIVSSIGNNTQEVLASLREAKPGIVRADKYAELGF
                     RCQVHGAPTLDPGESVDRRAMRFLGGGAGWNHVAMEQAIRDAGLEGSEISNPRTGIIM
                     GSGGPSARTIVEAADTARTKGPKRVGPFAVPKAMSSTASATLATWFKIKGVNYSISSA
                     CATSNHCIGNAFETIQVGKQDLVFAGGCEELDWTLSVLFDAMGAMSTSFNQTPEKASR
                     AYDADRDGFVIAGGAGVLVLEELEHARARGAKIYAEVAGYGATSDGMDMVQPSGEGAV
                     RCMQMALAPVKPPVDYINPHATSTPIGDLREIEAIREVFGAKCPPIAATKSLTGHSLG
                     AAGAQEAIYSLLMMNNGFICESANIDNLDPAFTDMPIVRERRDGVRLGCVLSNSFGFG
                     GTNACVVFKRLDA"
     gene            complement(2063..2590)
                     /gene="fabA"
                     /locus_tag="VNY79_12850"
     CDS             complement(2063..2590)
                     /gene="fabA"
                     /locus_tag="VNY79_12850"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009338784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0019171 -
                     (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-[acyl-carrier-protein] dehydratase
                     FabA"
                     /protein_id="HWX73381.1"
                     /translation="MQERRSNFDYEDLLACGRGELFAEGPQLPLPPMLMFDRISEIAE
                     VGGEYGKGLVRAVLELKPDLWFFPCHFKGDPVMPGCLGLDALWQMLGFFLGWLGSSGR
                     GRALGTGEIKLSGQVLPTMKNVVYGIDIKRVMRSKLVLGIADGWLSADGSVIYRALDL
                     KVGLFRDAEPQAARG"
     gene            2791..3294
                     /locus_tag="VNY79_12855"
     CDS             2791..3294
                     /locus_tag="VNY79_12855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="Fur family transcriptional regulator"
                     /protein_id="HWX73382.1"
                     /translation="MTQSRPVVSDASRLLAPILQLQAAGARTDLNGCPWHDVKAKLRE
                     VGLRPTRQRMALGWILFAKGDRHVTAEMLYEEATRAKVPVSLATVYNTLHQFTEVGLL
                     RQVAVDGSKAYFDTNNSEHHHFFIEDQNDLMDIPSSDVVVGKAPIPPEGYEIARIDVV
                     VRLRRKK"
     gene            complement(3381..3854)
                     /locus_tag="VNY79_12860"
     CDS             complement(3381..3854)
                     /locus_tag="VNY79_12860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015927132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SH3 domain-containing protein"
                     /protein_id="HWX73383.1"
                     /translation="MLAPLAAARAGNDAATSGLPVPRFVSVKADRVNVRGGPDKDHDV
                     SWVYTRVGWPVEIIAEFENWRRIRDSDGAEGWVYHSMLSGKRTAAVQLKAKSDLAPLY
                     AKPDAHSGETARLQSGVLGSVKHCTGIWCRFVGDGFDGWIAQEQLWGVYPNEKVE"
     gene            4152..>5151
                     /locus_tag="VNY79_12865"
     CDS             4152..>5151
                     /locus_tag="VNY79_12865"
                     /EC_number="1.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011083589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008465 - glycerate dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0051287 - NAD binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="D-glycerate dehydrogenase"
                     /protein_id="HWX73384.1"
                     /translation="MAAAKKPLVVITRRLPESVETRMRELFDARLNLDDKPMSQIELT
                     EAAKVADVLVPTVTDQIDRSVLSHSGEKLKLIANFGNGVDNIDVATALQRGITVTNTP
                     GVLTEDTADMTMALILAVPRRLAEGAQVLTSDSAWTGWSPTWMLGHRIWGKRLGIVGM
                     GRIGQAVARRAKAFGLQIHYHNRRRVAPRIEEELNATYWESLDQMLVRMDIVSINCPH
                     TPATYHLLSARRLKLIRPQAYIVNTARGEVIDENALARLIEAGEMAGAGLDVFEHEPA
                     VSPKLVKLARAGKVVLLPHLGSATLEGRVDMGEKVIVNIRTFMDGHRPPDRVLPSML"
BASE COUNT          889 a         1742 c         1704 g          816 t
ORIGIN      
        1 tgattcagtg cccgtcgtcg cgtccctcgc gatcgccgcg cagcgcctcc gggtgcggca
       61 tggcgatgac gttgtagccg gaatcgacga agtggatttc gccggtcacg ccggtggaga
      121 ggtcggacaa caggtagagc gcggcgccgc cgagctcgtc gagggtgacg ccgcgatgca
      181 gcggcgaatg ccgctgctgg aaggcgaaca tcatgcgcgc gtcgccgatg ccggcgccgg
      241 cgagcgtgcg gatcggcccg gaggagatgg cgttgacgcg gatcttccgc gcgccgaagt
      301 cgaccgcgag ataacgcacc gaagcttcga gcgccgcctt ggcgggaccc atggcgttgt
      361 agttcggcat cgcccgctcc ccgccattgt aggtcagcgt gagcatggcg ccgccgtcgg
      421 gcatcagcgc ggccgcgcgt ttggcggctt cggtgaaggc gaagcaggag atcagcatgg
      481 tgcgcaaaaa attgtcgcgc gtggtgtcgg aatagcgccc ggtgagctgc gtcttgtcgg
      541 agaaggcgat ggcgtgaacg agaaagtcga gcatgcccca cgcccgcccg atctccgcaa
      601 acacctggtc gacggacgcg atgtcctcga cgtcacaggg gaggatgaga tcggcgccta
      661 ccgaggcggc gagcggcttt acccgcttgg ccaacgcgtc gccctgatag gtgaatgcta
      721 gcttcgcttc gtgcgcggcg agcgtccggg cgatgcccca ggcgatcgag tggtcgttcg
      781 cgacccccat gatcagcccg cgcttgccgt gcatcaggcc cggcatgcgt cacgcatcca
      841 gccgcttgaa cacgacgcag gcgttggtgc cgccgaagcc gaacgaattg gagagcacgc
      901 agcccagtct cacgccgtcg cggcgctcgc gcacgatcgg catgtcggtg aaggcgggat
      961 cgagattgtc gatattggcg ctctcgcaga tgaagccgtt gttcatcatc agcagcgagt
     1021 agatcgcctc ctgtgcgccg gcagcaccga gcgaatgccc ggtcagcgat ttcgtcgccg
     1081 cgatcggcgg acatttcgcg ccgaacacct cgcggatcgc ctcgatctcc cgcagatcgc
     1141 cgatcggcgt cgaggtggca tgcgggttga tatagtcgac cggcggcttg accggggcca
     1201 gcgccatttg catgcagcgc accgcgccct cgcccgaggg ctgcaccatg tccatgccgt
     1261 cggaggtggc gccgtagccg gcgacctcgg cgtagatttt tgcgccgcgc gcccgagcat
     1321 gctcgagttc ctcgagcacc agcacgccgg cgccgccggc aatgacgaag ccgtcgcggt
     1381 cggcgtcgta ggcgcgcgag gccttttccg gggtctggtt gaagctcgtc gacatggcgc
     1441 ccatggcgtc gaacagaacc gacagcgtcc aatcgagctc ctcgcagccg ccggcaaaga
     1501 ccaggtcctg cttgccgacc tggatcgttt cgaacgcatt gccgatgcag tggttcgacg
     1561 tcgcgcaggc cgaggagatc gaatagttga cgcccttgat cttgaaccag gtggcgagcg
     1621 tcgccgatgc ggtcgacgac atcgccttgg gcacggcgaa gggtccgacg cgcttcgggc
     1681 ccttggtgcg ggcggtgtcg gcggcctcga cgatggtgcg cgccgaggga ccgcccgagc
     1741 ccatgatgat gccggtgcgc ggattggaga tttcgctccc ttcgaggccg gcgtcgcgga
     1801 tcgcctgctc catggcgacg tggttccagc cggcgccgcc gccgagaaag cgcatggcgc
     1861 ggcgatcgac ggactcgccc ggatcgagcg tgggcgcgcc gtgcacctgg cagcggaagc
     1921 caagctcggc gtatttgtcg gcgcgcacga tgcccggctt ggcctcgcgc aacgaggcca
     1981 gcacctcttg cgtgttgttg ccgatggacg agacgatgcc catcccggtg acgaccaccc
     2041 gcctcatctt gctccgccct gactagcccc gggccgcctg cggctcggcg tcgcgaaaca
     2101 accccacctt gagatcgagc gcacggtaga tcaccgagcc gtcggcagag agccagccgt
     2161 cggcgatgcc gagcacgagt ttcgagcgca tcacgcgctt gatatcgatg ccgtagacga
     2221 cgtttttcat ggtcggcagc acctggcccg agagcttgat ctcgcccgtg ccgagcgcgc
     2281 ggccgcggcc ggaagagccg agccacccga gaaagaagcc gagcatctgc cacagcgcgt
     2341 cgaggccgag acagccgggc atcaccggat cgcctttgaa atggcagggg aagaaccaaa
     2401 ggtccggctt aagctcgagc acggcgcgca ccaggccctt gccgtattca ccgcccacct
     2461 ccgcgatctc ggaaatgcgg tcgaacatca gcatcggcgg cagcggcagc tgcgggcctt
     2521 ccgcgaaaag ctcgccacgc ccacaggcga gcaggtcttc gtagtcgaag tttgaacgcc
     2581 gctcctgcat ccgccctctc cgccccgccc ggccgcgcga ttccctaaca tatgggaaca
     2641 tagcggcaaa gccgcacccc cgacgatgcg ccgcccgccg acgggccgcg gcctattgcc
     2701 ttcagtgttg cggcaggcgc cgggcggcgt ataatgattt cacttgcaac gatcttgccg
     2761 ggcccaccaa cgggccctcc gggtgccgca atgacacagt cgcgtccagt cgtttccgac
     2821 gccagcaggc tgctcgcacc aatcctccag ctgcaggcgg caggcgcgcg caccgatctc
     2881 aacggctgtc cctggcacga cgtcaaggcg aagctgcgcg aggtcgggct gcgcccgacg
     2941 cggcagcgca tggcgctcgg ctggatactt ttcgccaagg gcgaccgcca cgtgacggcg
     3001 gaaatgctct acgaggaagc gacccgcgcc aaggtgccgg tctcgcttgc gaccgtttac
     3061 aacaccttgc accagttcac cgaggtcggg ctgttgcgcc aggtcgccgt cgacggttcg
     3121 aaggcttatt tcgacaccaa caattccgaa caccaccact tcttcatcga ggatcagaac
     3181 gacctcatgg atattccctc ctcggacgtg gtggtgggca aggcgccgat cccgccggag
     3241 ggctacgaga tcgcccgcat cgatgtcgtc gtgcggctgc ggcggaagaa gtagtcgtca
     3301 ttccggactt gccgcggagc ttgccatcgg gccggccact acgggctgga cccgttggcc
     3361 gcaattcgga atgacgagga ctactcgacc ttctcgttgg gatagacgcc ccagagctgc
     3421 tcctgcgcga tccagccgtc gaagccatcg ccgacaaagc ggcaccagat cccggtgcag
     3481 tgcttgaccg agccgagcac gccggactgc aatcgcgccg tttcgccgct gtgcgcgtcg
     3541 ggcttggcgt agagcggcgc gagatcgctc ttcgctttca gctgcaccgc ggcggtgcgc
     3601 tttcccgaca gcatcgaatg gtagacccag ccttccgcgc cgtcggagtc acggatgcgc
     3661 cgccagtttt cgaactcggc gatgatttcg accggccagc cgacgcgcgt gtagacccag
     3721 gaaacgtcgt ggtccttgtc cggcccgccg cggacattga cccggtccgc cttgacgctg
     3781 acaaagcgcg gcaccggcag accgctggtc gccgcatcgt tcccggcccg cgctgctgcg
     3841 agaggcgcga gcatgaggag gaccgcaatc gcggccctca ccccaacgat catcagcccg
     3901 ctacgccgca atgcgacacg ccccacgccg agatgattgc ccccgccgcg ccgggaaccc
     3961 ggcgcgcttt gtgagagcgc agccatctgc tagagagaaa attgatgtac cgcctcccgg
     4021 ctcagtgtcg gcgagggcgg ttaaggagac ctgaacggcg gacgcggcaa acgccccttc
     4081 gttcccctcc cgccgctcgc gggcacagaa gggagcccgg gccgtgcgct gatctgcgca
     4141 aggggcagcg aatggcagcg gcgaagaagc ccttggtcgt gatcacgcgc cggctgccgg
     4201 agagcgtcga aacgcgcatg cgcgaattgt tcgacgcccg cctcaacctt gacgacaagc
     4261 cgatgagcca gatcgagctc accgaggccg ccaaggtcgc cgacgtgctc gtgccgaccg
     4321 tgaccgatca gatcgaccgg agcgtcttga gccattccgg cgaaaagctg aagctgatcg
     4381 ccaatttcgg caacggcgtc gacaatatcg acgtcgccac ggcgctgcag cgcggcatta
     4441 ccgtcaccaa caccccgggc gtcctgaccg aggacaccgc cgacatgacc atggcgctga
     4501 tcctggcggt gccgcggcgg cttgccgaag gcgcccaggt gctcaccagc gatagcgcct
     4561 ggaccggctg gagcccgacc tggatgctcg gtcaccgcat ctggggcaaa cgcctcggca
     4621 tcgtcggcat gggccgcatc ggccaggcgg tggcgcggcg cgccaaggcg ttcggactgc
     4681 agatccacta tcacaatcgc cgccgcgtgg cgccgcgcat cgaggaggag ctcaacgcca
     4741 cctactggga gagcctcgac cagatgctgg tgcgcatgga catcgtctcg atcaattgcc
     4801 cgcacacgcc ggccacctat cacctgctgt cggcgcggcg gctcaagctc attcgtccgc
     4861 aggcctacat cgtcaacacc gcgcgcggcg aggtgatcga cgagaacgcg ctggcgcgcc
     4921 tcatcgaggc gggcgagatg gcgggcgccg gcctcgatgt cttcgagcac gagccggcgg
     4981 tgagcccgaa actcgtcaag cttgcccgtg ccggcaaggt cgtgctgctg ccgcatctcg
     5041 gttcggcgac gctcgaaggc cgcgtcgaca tgggcgagaa ggtcatcgtc aacatcagga
     5101 ccttcatgga cggccaccgc ccgccggacc gcgtgctgcc gtcgatgctg t
//
LOCUS       DATMQB010000444         2779 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1176363, whole genome shotgun sequence.
ACCESSION   DATMQB010000444 DATMQB010000000
VERSION     DATMQB010000444.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2779)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2779)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2779
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1176363"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            379..810
                     /locus_tag="VNY79_12870"
     CDS             379..810
                     /locus_tag="VNY79_12870"
                     /inference="COORDINATES: protein motif:HMM:NF022135.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4198 domain-containing protein"
                     /protein_id="HWX73385.1"
                     /translation="MLRFAFVVVFTLTTALLLAPSPSVAFDPFATHEVTVQFATQDGK
                     PLANAEVQVFAPGDAKTAVITGRTDAEGKFVFAADQDGFWSAEAKGADQLARVMIRVG
                     GESQTSQSRISPFLVIGVLAVLLALAIWYRLLRARNRRPRS"
     gene            906..1706
                     /locus_tag="VNY79_12875"
     CDS             906..1706
                     /locus_tag="VNY79_12875"
                     /inference="COORDINATES: protein motif:HMM:NF018420.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1194 domain-containing protein"
                     /protein_id="HWX73386.1"
                     /translation="MVIDKLCACLESSRRQGRGSRLSPRINSVGCRPTGKQWVHCVST
                     WLLTTAALLAKSASAAGAGLALVLAVDVSASVTPDSYLLQRDGIARAFENPRLVNAIS
                     ALPGGIEALVLEWSDPDRIAITVGWTRLADTTGATAFAAAVRATKRSSEGLTAIGPAL
                     LTAAAVFDHAPEPAARRIIDISGDGMANFGLPPAVARDRTVAAGISINGLAILTEEPW
                     LEAYYRSNVIGGPGAFVLAARDFRSFAGAMLRKLVQEVADAAPSPQMQ"
     gene            complement(1694..>2779)
                     /locus_tag="VNY79_12880"
     CDS             complement(1694..>2779)
                     /locus_tag="VNY79_12880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012112167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III PLP-dependent enzyme"
                     /protein_id="HWX73387.1"
                     /translation="TPCLVVDLDLIVAAYEALRHYLPLARIYYAVKANPAAEIVGVLS
                     RKGASFDVASRGEIALCLGNGVAPDRLSFGNTIKKEKDIAFAYQAGVRLFAFDSAHEL
                     EKLARTAPGARVFCRILVTCDGADWPLSRKFGCAPEMAVELLRQARDACLDPYGISFH
                     VGSQQTDLGQWDGAVGTAARMFSALAEADINLRMVNIGGGFPAHYSGEVPGVERYAQA
                     VMAAITRHFGNDLPEIIIEPGRSLVGDAGVIQSEVVLIAEKGGGDDRRWVYLDVGKFN
                     GLAETMDESIKYRIATPGRRGSAGPVVLAGPTCDSADILYEKTEYRLPLALRVGDKIE
                     ILSTGAYTASYASVGFNGFGPIRTYCI"
BASE COUNT          477 a          899 c          886 g          517 t
ORIGIN      
        1 atgtcaagga cacgcatacc cggtgcaaga tgggcggcgc gcaacaggaa gggcatgaag
       61 tgcgccgtga catgcgcgaa agcacggtcg tactctgccg ccgcctcgtc cttgaaggct
      121 agctcctccg ccatcccgac ctctgaatcc ttgtcctttg tccttcggat gaaatgttcg
      181 cagagccgca tcgttcattg caagctgcga gcttactact tggtcgatct ccgtgctgtg
      241 tacgtccgca gtggggcagg aagcgccgtt cccggcgcga atgttgagtg gccaagaacg
      301 gtcgaaaaag gaaattcgaa ctgaggcgtt acctggcttg tcgctagcgc caagccagga
      361 gaggactatc tttctcgcat gctcaggttc gccttcgtcg tcgtatttac tctgacaacg
      421 gcgcttctgc tcgcaccgtc gccttcggtc gccttcgacc cgtttgcgac gcacgaggtg
      481 acggtgcaat tcgcgaccca ggacgggaag ccgctggcga acgccgaggt gcaggtattt
      541 gcccctggcg acgctaagac tgcggtaatc accgggcgca ccgacgctga aggaaaattt
      601 gttttcgcag ccgaccaaga cggcttctgg agcgccgagg cgaagggcgc cgatcagctc
      661 gcgcgggtaa tgatccgtgt cggcggcgaa tcgcagacat cgcagagccg gatttccccg
      721 tttctcgtga tcggcgtcct cgccgttctt cttgctctcg cgatttggta ccgcttgctg
      781 cgcgcccgca accgccggcc gcgttcctga gaatccggct caaaatctat tgaggaattg
      841 caatagatta cactcaatcg cctccccggc gaaagccggg ctccatcgtt cccccgcacc
      901 tgcctgtggt cattgataag ctgtgcgctt gcttggaaag ttcgcggcga cagggccgtg
      961 ggtcccggct ttccccacgg atcaattccg tgggctgccg gcccacggga aagcaatggg
     1021 tacattgcgt atccacatgg ctcctgacta cggcagctct gctggcaaaa tcggcgtcgg
     1081 cggccggcgc cggtcttgcg ctggtgctcg cggtcgatgt gtccgcgagc gtgacgccgg
     1141 attcctatct gctgcagcgc gacggcattg cgcgtgcttt cgagaacccg cgcctagtca
     1201 acgcgatctc ggctcttccc gggggcatcg aagcgctggt gctcgaatgg tccgatcccg
     1261 accgcatcgc gatcacggtc gggtggacac ggctcgcgga cacgacaggc gccacggcgt
     1321 ttgctgccgc cgtccgtgcg acgaagcgca gttccgaagg gctgaccgcg atcggtccgg
     1381 cattgctcac cgccgccgcc gtgttcgacc acgcgcccga gccggcggcg cgccggatca
     1441 tcgacatctc cggcgacgga atggcaaatt tcgggctgcc tccagcggtg gcacgcgacc
     1501 gaaccgttgc ggcggggatt tcgatcaacg ggctcgcgat cctcaccgag gagccttggc
     1561 tggaggcgta ttaccgcagc aacgttatcg gcggccccgg cgcttttgtc ctcgccgctc
     1621 gggatttccg cagcttcgcc ggcgcgatgc tccgcaaact cgtgcaggag gtagccgatg
     1681 ccgcgcccag ccctcagatg cagtaagtcc ggatcggtcc gaagccgttg aacccgactg
     1741 aggcgtagct cgccgtgtac gcgccggtcg acaggatctc gatcttgtcg ccgacccgca
     1801 gggcgagcgg cagccggtac tcggtcttct cgtagaggat gtcggcactg tcgcaggtcg
     1861 ggccggcgag gacgacggga ccggccgatc cgcggcggcc gggtgtcgcg atgcggtatt
     1921 tgatgctctc gtccatcgtc tcggccagcc cgttgaactt gccgacgtcg agataaaccc
     1981 aacgccgatc gtcgccgccg cctttttcgg cgatcagcac aacctcgctc tggataacgc
     2041 cggcatcacc gaccagcgag cgtcccggct cgatgatgat ctcgggcagg tcattgccga
     2101 aatgccgcgt gatcgccgcc atcaccgcct gggcatagcg ctccaccccc ggcacttcgc
     2161 cgctgtaatg cgccgggaag ccgccgccga tattgaccat ccgcaggttg atatcggctt
     2221 cggcgagcgc cgagaacatc cgcgccgcgg tgccgaccgc gccgtcccac tgtccgaggt
     2281 cggtctgctg cgagccgacg tggaacgaaa tgccgtaggg gtcgagacag gcgtcgcggg
     2341 cttggcgcaa tagctcgacc gccatctccg gcgcgcagcc gaatttgcgc gacagcggcc
     2401 aatcggcgcc gtcgcaggtg acgaggatgc ggcagaagac ccttgcgccg ggtgcggtgc
     2461 gcgccagctt ttcgagctcg tgagcgctgt cgaaggcaaa cagccgcacc ccggcctgat
     2521 aggcgaaggc gatatccttt tctttcttga tcgtgttgcc aaaagacaac cggtcggggg
     2581 cgaccccgtt gccgaggcag agcgcgattt caccgcggct cgcgacatcg aagctggcgc
     2641 ccttccggct gagcacgccg acgatctcgg cggccgggtt ggccttgacc gcataataaa
     2701 tccgagcgag cggcaaatag tgccgcagcg cctcataggc cgcgacgatc aggtcgagat
     2761 cgacgacgag gcaaggggt
//
LOCUS       DATMQB010000445         4143 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3042516, whole genome shotgun sequence.
ACCESSION   DATMQB010000445 DATMQB010000000
VERSION     DATMQB010000445.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4143)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4143)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4143
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3042516"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(218..592)
                     /locus_tag="VNY79_12885"
     CDS             complement(218..592)
                     /locus_tag="VNY79_12885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008973022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensory rhodopsin transducer"
                     /protein_id="HWX73388.1"
                     /translation="MEPIGRKRWAIAEGYIPSRSSFSEPALVSHETACILNAGDRQAH
                     VDITLFFADREPVGPYRVTISPRRTLHLRFNDLEEPAAVPRDTDFSSVFEADVPIIVQ
                     HTRLDSRHAEVSLWSTTAYAEA"
     gene            778..1833
                     /locus_tag="VNY79_12890"
     CDS             778..1833
                     /locus_tag="VNY79_12890"
                     /inference="COORDINATES: protein motif:HMM:NF028222.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HWX73389.1"
                     /translation="MRALTVAPGIADSARLEDVADPPQSDGAVLVRTLALGVCGTDRE
                     IVSGAYGWAPPGEYRLVIGHESLGSVEEAPAGCGVEAGDHVVGIVRRPDPVPCSACAV
                     DEWDMCRNGRYTERGIKERHGYGAEFFRVEPDFLVKVDAALGIAAVLLEPTSIVAKAW
                     DHTERIGQRARSWRPRTLLVTGAGPIGLIAAMIGVQRGLDVHVVDHEDHQQKHDLVRS
                     LGAAYHAGGLAKLNGRFKPDILMECSGGAPSVVRDVLGRTAPGGIVCLVGVTAPGHDF
                     DIDVGEFNRTMVLDNDTVFGTVNANRRHYELAGEALQRADKAWLNRLITRREPLDRWT
                     QSLERQPDDIKVIVDFS"
     gene            1853..3676
                     /locus_tag="VNY79_12895"
     CDS             1853..3676
                     /locus_tag="VNY79_12895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012046184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 15 protein"
                     /protein_id="HWX73390.1"
                     /translation="MAARIEDYAIIGDCRTAALVSRDGSIDWFCCPRFDSDACFAALL
                     GTPEHGRWSIAPVAPARVTRRYRPNTLVLETHFETRDGAAMLVDFMPLRSGNPAIVRL
                     VIGTRGQVAMSTELILRFGYGAIVPWVTRLENGALRAIAGPEMMIVHTPVHLRGENMT
                     TVGEFTINQGDTIPFVLSYLQSHRPLHEPLDPTTALNETETFWREWAAKCRPAGPWTE
                     AVVRSVITLKALTYAPTGGMVAAPTTSLPEQLGGERNWDYRFCWLRDATLVLLGAMNA
                     GYYEEAQAWRDWLLRAVAGSPDQLQIMYGIGGERRLTEWVAPWLPGYENSAPVRIGNA
                     AHSQLQLDVFGEIMDVHHQARRSGLSSNESGWGAQLEFIEHLTKIWREPDQGIWEVRG
                     APRHFTHSKVMAWVAFDRAIKSAETFGLPGALDDWRKVREEICDEVCAKGFDQELGSF
                     VQSYGAKQLDASLLLLPSVGFLPVSDPRIKGTVAAIERRLLRNGFVMRYDTENADDGL
                     PPGEGAFLACSFWLADVYTLQDRAADAVRLFKRLVGLANDVGLLSEEYDPRTERLVGN
                     FPQAFSHVALVNSAYNLTRATKPVEQRAQVEHAPPEEVIAQ"
     gene            3806..>4143
                     /locus_tag="VNY79_12900"
     CDS             3806..>4143
                     /locus_tag="VNY79_12900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007603623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HWX73391.1"
                     /translation="MCELCAEANVSRSIARRSVLKLGLAAAVALAPQALAAKPKGPVK
                     PENVLSPDAALDRLMQGNARYVEGVSRRHDFKHEREPLSTGQNPFAAVLSCADSRIAP
                     EYCFDTARGDV"
BASE COUNT          685 a         1376 c         1403 g          679 t
ORIGIN      
        1 tgtttttgcc cgcgctatgc ggttggaaac gacgacgaca ctcacgttcg tcctccgact
       61 tcgttgcact gcacacgtcc aacccgttga ctcaactttt gttccatatt gttgaacaac
      121 cgttcacgga cgcgagtggc agaaaggcgc gccgcatggg gatttgccgc cattgagcgt
      181 gcgattcggc ccgggggagt gcttcggccc cattcgctca ggcctccgca tatgcggtcg
      241 tcgaccacag gctcacttcg gcgtgccgcg aatccagtcg cgtgtgctgc acgatgatcg
      301 gtacgtcggc ctcgaacacc gatgaaaagt cggtatcgcg cggaacggcg gcgggctcct
      361 cgaggtcgtt gaagcgcaaa tgcagtgtgc gccgcggcga aatggtcacc cgatacgggc
      421 cgacgggctc gcggtcggcg aaaaagagcg tgatgtcgac gtgcgcctgc cggtcgccgg
      481 cattgagaat gcacgccgtc tcgtgcgaaa cgagagccgg ttcggaaaac gaactccgag
      541 aagggatgta cccttccgca atagcccaac gcttgcgccc gatgggctcc atgtcgaggt
      601 cccgcgcccc cgggctcttt ggggcgtcgc ccggttccgg cgggcacagg aaaaccaccg
      661 aagcgccgtt tagttcccga atcggaactt tccgcagacg ccggagctta ttcacggcgc
      721 gctcggcgcg ctcgtgatga cggttgcggg aaaccaggca gtcgcgggaa cagcagaatg
      781 cgcgccctca ctgtcgcgcc ggggattgcc gattcagcgc ggctcgaaga cgttgccgac
      841 ccgccgcagt cggacggcgc agtgctggtg cgtacgctcg cgctcggtgt ttgcggcacg
      901 gaccgtgaga tcgtctccgg cgcgtatggc tgggctccac cgggcgaata ccggctggtg
      961 atcggtcatg aatcgctcgg cagtgtggag gaggcgcccg ccggttgcgg cgtggaggcc
     1021 ggcgatcatg tcgtcggcat cgtacggcgg ccggatccgg ttccgtgttc cgcgtgcgcc
     1081 gtcgacgagt gggacatgtg ccgcaacggc cgctacaccg aacgcggcat caaggagcgc
     1141 cacggctacg gcgccgagtt ctttcgcgtc gagcccgatt tcctggtcaa ggtcgatgcc
     1201 gcgctcggca tcgctgccgt gctgctggag ccgacgagca tcgtggccaa ggcttgggat
     1261 cacaccgagc gcatcggtca gcgtgcgcgc tcctggcgac cgcggacgct gctggtcacc
     1321 ggcgccggcc cgatcggcct catcgcggcg atgatcggcg tgcagcgcgg cctcgacgtt
     1381 cacgtggtcg accacgagga ccatcagcag aagcacgacc tggtgcgttc gctcggcgcc
     1441 gcctatcacg ccggcggcct cgcgaagctc aacggccgtt tcaagcccga cattctgatg
     1501 gagtgcagcg gcggcgcgcc gagcgtcgtg cgtgacgttc tcggccgcac cgcgcccggc
     1561 ggcatcgtct gcctcgtcgg cgtcactgca cccggccatg acttcgacat cgatgtcggg
     1621 gagttcaacc gcaccatggt gctcgacaac gacaccgtgt tcggcaccgt gaatgccaac
     1681 cgcaggcact acgagctggc cggcgaagcc ctgcagcggg cggacaaggc ctggctcaac
     1741 cggctgatca cgcggcgcga gccactcgac cgctggacgc aatcgctcga acggcagccg
     1801 gacgacatca aggtcatcgt cgatttctcc tgacgcagaa gctgagagcg aaatggccgc
     1861 gcgcatcgaa gactacgcga tcatcggcga ctgccggacc gccgcgctcg tctcccgcga
     1921 cggctcgatc gactggttct gctgcccgcg cttcgactcc gacgcctgtt tcgcggcgct
     1981 cctcggcacg cccgagcacg gccgctggtc gatcgcgccg gtcgcgccgg cccgcgtcac
     2041 ccgccgctat cggccgaaca cgctggtgct ggaaacccat ttcgagaccc gcgacggcgc
     2101 cgcgatgctg gtcgatttca tgccgctgcg ctccggcaat ccggcgatcg tccgcctcgt
     2161 gatcgggacc cgcggccagg tggcgatgtc gaccgagctg atcttgcggt tcggctatgg
     2221 cgcgatcgtg ccctgggtga cgcggctcga gaacggcgcg ctgcgcgcca tcgccgggcc
     2281 ggaaatgatg atcgtgcaca cgccggtgca tctgcgcggc gagaacatga ccaccgtcgg
     2341 cgagttcacc atcaaccaag gcgatacgat cccgttcgtc ctgagctatc tgcagtcgca
     2401 ccggccgctg cacgagccgc tcgacccgac gacggcgctc aacgagaccg agacgttctg
     2461 gcgcgagtgg gcggcgaagt gccggccggc gggaccgtgg acggaagcgg tcgtgcgctc
     2521 ggtgatcacg ctcaaggcgc tcacctacgc gccgaccggc ggcatggtcg ccgcgcccac
     2581 tacctcgctg ccggagcagc tcggcggcga gcgcaactgg gactaccgtt tctgctggct
     2641 gcgcgacgcc accctggtcc tgctcggcgc catgaacgcc ggctactacg aggaggcgca
     2701 ggcgtggcgc gattggctgc tgcgcgccgt ggccggcagc ccggaccagt tgcagatcat
     2761 gtacggcatc ggcggcgagc ggcggttgac cgaatgggtc gcgccgtggc tgccgggcta
     2821 cgagaattcc gcgccggtgc gcatcggcaa tgccgcccac agccagcttc agctcgacgt
     2881 gttcggcgag atcatggacg tgcaccatca ggcgcggcgc agcgggctct caagcaacga
     2941 atcgggatgg ggcgcgcagc tcgagttcat cgagcatctg acaaagatct ggcgcgagcc
     3001 cgatcaaggc atctgggagg tccgcggcgc accccggcat ttcacccatt ccaaggtcat
     3061 ggcctgggtc gcgttcgatc gcgcgatcaa gagcgccgag acgttcgggc tgcccggggc
     3121 gcttgatgat tggcgcaagg tgcgggaaga aatctgcgat gaggtatgcg ccaagggctt
     3181 cgaccaggag ctggggagct tcgtgcagtc ctacggcgcc aaacagctcg acgccagcct
     3241 gctgctgctg ccgtccgtcg gctttttgcc ggtttccgat ccgcgcataa aaggcacggt
     3301 ggcggcgatc gagcgccgcc tgctgcgcaa cggtttcgtc atgcgctacg acaccgaaaa
     3361 cgcggacgac ggcctgccgc cgggcgaagg cgcgtttctc gcctgcagct tctggcttgc
     3421 cgacgtttac acgctgcagg accgcgcggc ggatgccgtg cggctgttca aacggctcgt
     3481 cggcctcgcc aacgatgtcg gcttgctcag cgaggaatat gatccgcgca ccgagcggct
     3541 ggtcggcaac ttcccgcaag ccttctcaca cgtggcgctg gtcaacagcg cctacaatct
     3601 cacccgcgcc acgaagccgg tcgagcagcg tgcgcaggtc gagcacgcgc cgccggagga
     3661 ggtcattgcc cagtgatcgg ccttgggcgc cgcacgcggg tttatcggcc ggcgcgaatg
     3721 aactagtctg acggctgatg gcggcgggag ggcttaagag cgatcacgca attccgaacg
     3781 cctcgccgac gcgggagccg ggaatatgtg cgaactgtgc gctgaagcga acgtgtctcg
     3841 gtccatcgcg cgccgcagcg tgctgaagct cggactggcc gcagcggtgg cgctggcgcc
     3901 gcaggcgctg gccgccaagc cgaagggacc ggtcaagccg gaaaacgtgc tttcccccga
     3961 cgcggcgctc gaccgcctga tgcagggcaa tgcgcgttac gtcgaaggcg tcagcagacg
     4021 gcacgacttc aagcatgagc gcgaaccgct gagcacgggg cagaacccct ttgccgcggt
     4081 gctcagctgc gccgactcgc gcatcgcccc ggaatactgc ttcgataccg cgcgcggcga
     4141 cgt
//
LOCUS       DATMQB010000446         3028 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2386097, whole genome shotgun sequence.
ACCESSION   DATMQB010000446 DATMQB010000000
VERSION     DATMQB010000446.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3028)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3028)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3028
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2386097"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            588..914
                     /locus_tag="VNY79_12905"
     CDS             588..914
                     /locus_tag="VNY79_12905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73392.1"
                     /translation="MSPQAVESFFALAIGFAFAGSCANGYRLFGEHFPSFRLLESGPA
                     AARFAAIPLLVFAAPFIIMRNSVRGRRIERRRAQMVMVATVIAGLWSLMSGTVVVMAF
                     EAVIRA"
     gene            complement(988..2220)
                     /locus_tag="VNY79_12910"
     CDS             complement(988..2220)
                     /locus_tag="VNY79_12910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008143586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HWX73393.1"
                     /translation="MPPDPSPPAPHPEASQTAPPQVVSRRGLTIATLAALGIASVIVV
                     MGITTRKMADAKLREWTENQAVPVVAVALPDTRGKRTTFELPGRLEAYTQAQIFARVS
                     GYVKEWKVDIGTPVKAGDLLAEIDAPDLDQQIMQAQADLASAKANSALSDMTLTRGQS
                     LITSRAISQQDLDQRAADSSNKQGLVRSAQANLDRLRVLERYKRLVAPFDGLVTARTT
                     DVGALINAGSGGGPPMFVVSQIEKLRAYVNVPQNYVPSIRVGSTKAQISVPEHPGKSF
                     PGTVEASAQSVDAASGTTRMQLVVDNAANELMTGAFATVTFELPHPETAVNVPASALI
                     FNRSGLQVAIVDRENRIILKPITISRDLGSEVEIASGVVADDRVVINPPDGVVTGDQV
                     RVAGTPGAPGEPATASAK"
     gene            complement(2210..>3028)
                     /locus_tag="VNY79_12915"
     CDS             complement(2210..>3028)
                     /locus_tag="VNY79_12915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018270532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HWX73394.1"
                     /translation="YQVDSLNALQNLPITAPGMPPQTLGGIADFKRVAKPAVVAQYNI
                     QSMIQIYGTSQGRDLGAVAADVQKILNDTAKDAPKGAQVAMLGQVKTMNSSFSGLIFG
                     LLAAVVLIYLLIVVNFQSWADPFVIITALPAALAGIVWMLFATGTTLSVPALTGAIMC
                     MGVATANSVLVISFAKERLEQHGDAAAAAIEAGFVRLRPVLMTALAMIIGMLPMALGF
                     GEGGEQNAPLGRAVVGGLAFATIATLIFVPVVFSIIHQRRRGAGTRATGEPNAA"
BASE COUNT          489 a          965 c         1031 g          543 t
ORIGIN      
        1 tcggcgatcc aaggcggcgg gaagcggccg gcctcgggcg tgtcgatcat cggaacctga
       61 gatgagagag accccggcag tgcttggctg gagcgggaca tgccggggcc tcctgcgcgt
      121 agccgggaac ccatcccccc cggcggttca ttgaaccccg gcgcgggtta acagaatcct
      181 tcaaaatgac cgcatcgccg gccacggcta ggcctgtggt tctgggtgcg acgcagacct
      241 gagataagag agaccccggc ggggttggtg agccgaggtc tcctgcactg tctgccagag
      301 ggtccagtct ctccggcgac tctcattgaa acccggcacg gttaacagaa cctttcaaca
      361 tgaccgcatc gggcgggcca cggctaggcc aaaaagccga ttacattaat tagccggcaa
      421 ttagccggag gcaaatcttg tgtggaagaa gtccccgtgg aatcggcact tcttgcactt
      481 tcatccccta accttttctt aagcatccga tggcggcgcc gcgccggctc tgcgatgact
      541 tcgggaaagc tccggggggc tgaatgttcg caactgcgtt gccggcgatt tcgccgcagg
      601 ccgtcgagtc tttctttgcg ctcgccatcg gcttcgcgtt cgccgggtcg tgcgccaacg
      661 gctaccggct tttcggcgag cattttccga gcttccggct gctcgagagc ggcccggctg
      721 cggcgcgctt tgccgcgatc ccgctgctcg tgttcgcggc gcccttcatc atcatgcgca
      781 acagcgtacg cgggcggcgc atcgaacgcc ggcgcgcgca aatggtcatg gtggcgacgg
      841 tgatcgccgg cctgtggagc ctgatgtccg ggaccgtggt ggtgatggcg ttcgaggccg
      901 tcatccgggc ctgacggaca aacgacagac gacagattaa ccgaactacg cctcgtcgtc
      961 cgtccttcgg ctaccgtcgt ccgaatctca cttcgccgac gcggtcgctg gttcgcccgg
     1021 tgctcccggc gtgccggcga cgcgcacctg gtcgccggtc acgacgccgt ccggcggatt
     1081 gatgacgacg cggtcgtcgg cgacgacgcc cgacgcgatc tcgacctccg atccaaggtc
     1141 gcgtgaaatc gtgatcggct taaggatgat ccggttctcg cggtcgacga tggcgacctg
     1201 caggccgctg cggttgaaga tcagggcgct cgccggcacg ttcacggccg tctcgggatg
     1261 gggcaattcg aacgtcacgg tggcgaaggc gccggtcatc agttcgttgg cggcattgtc
     1321 gacgacgagc tgcatccgcg tcgtgccgga ggcggcgtcc acggattgcg ccgaggcttc
     1381 caccgtccca ggaaagctct ttcccgggtg ttccggcact gaaatctgcg ccttggtgct
     1441 gccgacgcgg atgctgggca catagttctg cggcacgttg acgtaggcac gcagcttttc
     1501 gatctgcgag accacgaaca tcggcggacc gccgccggag ccggcattga tcagcgcccc
     1561 gacgtcggtg gtgcgtgcgg tgacgagccc gtcgaacggc gcaacgaggc gcttgtatcg
     1621 ttcgagcacc cgcaggcggt cgaggttcgc ttgtgcggac cggaccagac cctgcttgtt
     1681 ggaggaatcc gccgcgcgct ggtcgagatc ctgctgcgag atggcgcggg aggtgatcaa
     1741 ggactggcca cgcgtcagcg tcatgtcgga gagcgcggaa ttggccttgg cgctggccag
     1801 atcagcttgc gcctgcatga tctgctggtc gagatcgggg gcgtcgatct cggcgagcag
     1861 gtcgcccgcc ttgaccggcg tgccgatgtc gaccttccat tccttcacat agccgctgac
     1921 gcgcgcgaag atctgcgcct gcgtgtaggc ttcgagccgg ccaggaagct cgaacgtcgt
     1981 ccgcttgccg cgggtatcgg gcagggcgac ggcgacgacc ggcacggcct ggttctcggt
     2041 ccattcccgc agcttggcgt cggccatctt tcgcgtcgtg atgcccatga cgacgatgac
     2101 ggaggcgatg ccgagcgcgg cgagagtggc gatggtgagc ccgcggcgcg acaccacctg
     2161 cggcggcgcc gtctgcgacg cctccgggtg cggagccggc ggactgggat caggcggcat
     2221 ttggttctcc cgtcgcccgg gtgccggctc cccggcgacg ttggtggata atgctgaaga
     2281 ccaccgggac gaatatcaga gttgcgatgg tcgcgaaagc aagtccgccg accacggcgc
     2341 ggccgagcgg cgcgttctgc tcgccgccct cgccgaagcc aagcgccatc ggcagcatgc
     2401 cgatgatcat ggccagcgcc gtcatcagca ccggccgcag gcggacgaat ccggcttcga
     2461 tcgcggcggc ggcggcgtcg ccgtgctgct ccagccgctc cttggcgaag ctgatgacga
     2521 ggacgctgtt ggcggtcgcc acccccatgc acatgatggc gccggtcagt gccggcaccg
     2581 acagcgtcgt gccggtggcg aacagcatcc agacgatgcc ggcgagcgct gccggcagcg
     2641 ccgtgataat cacgaacgga tcggcccagg attggaagtt gaccacaatc agcagataga
     2701 tgagcacgac cgccgccagc agcccgaaga tgagcccgga gaacgaactg ttcatggtct
     2761 tgacctgccc gagcatggcc acctgggcac ccttcggcgc atccttcgcg gtgtcgttca
     2821 ggatcttctg cacgtcggcg gcgacggcgc cgaggtcgcg gccctggctg gtgccgtaga
     2881 tctggatcat cgactggatg ttgtattgcg cgacgaccgc gggtttcgcc acccgcttga
     2941 agtcggcgat gccgcccagc gtctgcggcg gcattcccgg cgcggtgatg ggaagattct
     3001 gcagcgcgtt gagcgaatcg acctgata
//
LOCUS       DATMQB010000447         6804 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_867078, whole genome shotgun sequence.
ACCESSION   DATMQB010000447 DATMQB010000000
VERSION     DATMQB010000447.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6804
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_867078"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            284..1342
                     /gene="cax"
                     /locus_tag="VNY79_12920"
     CDS             284..1342
                     /gene="cax"
                     /locus_tag="VNY79_12920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013215984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015368 - calcium:monoatomic cation
                     antiporter activity [Evidence IEA];
                     GO_process: GO:0006816 - calcium ion transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="calcium/proton exchanger"
                     /protein_id="HWX73395.1"
                     /translation="MMNWLLLFIPAAVGLELLAPERYLLIFIASSLSILPLAWWMGRA
                     TEELAERLGEAIGGLLNATFGNAAELIIALTALQAGLHDVVKASIAGSIIGNILLVLG
                     AAMLAGGLRHPEQHFNPAGARSQATMLTLAAIALVLPATFQAAANTKTEGLNRLSVSI
                     SVVLLVAYLLNLVYALITHPALFAGSYVPEKGKANISVRRASAVLAATTAGIAWMSEI
                     MVKAIEPTVHELGLSDLFVGVFMVAVMGNAAEHATAITAARKDRMDLSLSIAIGSSVQ
                     VALLVTPVLVLSSLIFGPRPMDLAFPVGLVVTILLSVLITGQIAGDGRSDWLKGAQLL
                     VVYLVLALAFFFLPGSSP"
     gene            1545..1727
                     /locus_tag="VNY79_12925"
     CDS             1545..1727
                     /locus_tag="VNY79_12925"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73396.1"
                     /translation="MKGSFAISLLFGAAMYAALGLFGLAVFHDAGPVTRAVSDGYGIA
                     YAAIAAADTSAAQARK"
     gene            1916..2548
                     /gene="nthA"
                     /locus_tag="VNY79_12930"
     CDS             1916..2548
                     /gene="nthA"
                     /locus_tag="VNY79_12930"
                     /EC_number="4.2.1.84"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018822 - nitrile hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0050898 - nitrile metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrile hydratase subunit alpha"
                     /protein_id="HWX73397.1"
                     /translation="MAHDHDHDDHDGHASELSEMQLRVRALETVLAEKGYIDPAALDV
                     MIEAFETQIGPHNGARVVAKAWADPAFKRALIEDATKAVQSLGLINRVGDHLIAVENT
                     PGLHNVIVCTLCSCYPWEVLGLPPIWYKAAPYRSRAVNDPRGVLADFGLKLPTDTQIR
                     VWDSTAETRFIVLPMRPAGTEGWSEDKLATLVTRDCMIGTGLPKNPAEAA"
     gene            2548..3204
                     /gene="nthB"
                     /locus_tag="VNY79_12935"
     CDS             2548..3204
                     /gene="nthB"
                     /locus_tag="VNY79_12935"
                     /EC_number="4.2.1.84"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007610314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0018822 - nitrile hydratase activity
                     [Evidence IEA];
                     GO_process: GO:0050898 - nitrile metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrile hydratase subunit beta"
                     /protein_id="HWX73398.1"
                     /translation="MDGIHDMGGMHGFGKVEPEQNEPVFHAVWEARCLALNRAMGVIG
                     AWTIDEGRSGIEQLPPQVYLAHSYYGKWALRLENMVINRGLAGADEIAAGHALRPGKA
                     VKRKLGVADVPHALTRGSFGRQAPAPARFKVGQRVRTKVIHPATHTRLPRYARGRIGT
                     IEALRGCHVFPDSTAVGAGENPQWLYTVVFDGRELWGENTDPTLTVSIDAFEPYLEAA
                     "
     gene            3237..3626
                     /locus_tag="VNY79_12940"
     CDS             3237..3626
                     /locus_tag="VNY79_12940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003674 - molecular_function [Evidence
                     IEA];
                     GO_process: GO:0050898 - nitrile metabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrile hydratase accessory protein"
                     /protein_id="HWX73399.1"
                     /translation="MDSGARSLRSLGRDDGLDVPRDEDGPVFREPWEAQAFALALSLH
                     ERGVFSWQEWTAALGEEIKKAQAAGDPDTGETYYHHWLAALERLVAAKGLADAQSLAR
                     TRDAWQRACERTPHGIPIALQPEDFGE"
     gene            complement(3682..4368)
                     /locus_tag="VNY79_12945"
     CDS             complement(3682..4368)
                     /locus_tag="VNY79_12945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HWX73400.1"
                     /translation="MTLLTIDALRVKLQAVEVLRGVSLTVQSGEMVGLVGRNGAGKTT
                     TLRAVMGLVGANAGHISFAGQSLTALPTYRRAALGIGYMPEDRRLVPQLTVEENILLP
                     SWATRAPDAASRLDHAYGLMPEVATMRQRKALALSGGQQKLVALARALTIGTRLLLLD
                     EPFEGVAPALSRRLAEVIGMLRGKDVAVLIAQSDLNHSVKLLDREYLIERGTNRERRA
                     EQIQANGGSV"
     gene            complement(4365..5114)
                     /locus_tag="VNY79_12950"
     CDS             complement(4365..5114)
                     /locus_tag="VNY79_12950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002711000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73401.1"
                     /translation="MTALLETEGLQKSFGAVIAAKDISVAARRGERLGLIGNNGAGKT
                     TFVNIVTGYLRPDAGRVVLDGADITGLAPRRVRRQGVSRSFQIPQLFASLTPEENLLM
                     ALGIADDKGMSAWRPARSGAMMAGLEDLLERFRLGEYRHHTIATLPGGVRKLVDIAMA
                     VTHQPKLLLLDEPSSGVAAEEKFPLMDVIMRALEGSDATVIFVEHDMEIVGRYAERVL
                     AFYEGRVIADGTPTVVLGNAEVQRYVTGVAP"
     gene            complement(5111..6091)
                     /locus_tag="VNY79_12955"
     CDS             complement(5111..6091)
                     /locus_tag="VNY79_12955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007196055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX73402.1"
                     /translation="MTGRVGTLGAALLAFAALALLGRILPHWFVLVATLAFAKGLVAL
                     GLVVLMRGGLVSFGQGIFFCAGGYAAGLAMRSLGVTDAVLLVALGGALALILGLIIAP
                     LLAGYRGIFFATLTLALSMIAYGILDKTYSLGGSDGLNLQAPTFLTYQPQTSQEVSYA
                     LFVLASLLTAVAAALCRIHFDSIRGLLSLAARDNEIRVEYLGASVRWVSGTNFIISSL
                     LGGIGGALAALSLGHIDPDFAFWTTSGEFVFLAILSGYASVTAVFVAAVLLELVRSFS
                     SQYFPNTWQGALGIFLLLVILFLPEGLGSLVRRRRRTAVKPAPKPVESVK"
     gene            complement(6091..>6804)
                     /locus_tag="VNY79_12960"
     CDS             complement(6091..>6804)
                     /locus_tag="VNY79_12960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007196054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX73403.1"
                     /translation="GPAFLGYFVMLGAALLVAVAMGPLLERGVLRLFYRRDEVVIVLV
                     TYALFLILEDATKLIWGVNPYYAYEPYGLLGNVSVFGLSYVGYDFALVGLALLTGVLL
                     WLGLNRTISGKVVLAVIHDRDISGAMGVNVTRVFVVAFTFGVFLAALGGAFTAPKISV
                     QPGISISVILLSFAVVVIGGLGSVEGAAIAALIVGLARAAAIHLMPSAELFIVYLVMA
                     LVLALRPEGLFQRTTTRKI"
BASE COUNT         1241 a         2181 c         2236 g         1146 t
ORIGIN      
        1 cgttcaaaat cagctttttc gagcggtcca ttcggggtga caataagaat ccctcgatcc
       61 cgcaatagtt caaatttcag catgatttgt cctcctaacg ccgtagggac attcattgct
      121 ccattcgagg cacaccctca agaggatcaa ccccgctggc gctcagggcc cggtaggcgc
      181 tacgcatttt tcggggctgg cctggtagct catacaggat cctagccagg accgcgcggc
      241 atcatgaatt gcacgactgg cggctgggaa ggtatcaatt gcgatgatga actggcttct
      301 gcttttcata cctgccgcgg ttggcctgga actgctcgct ccggagcggt atctccttat
      361 ttttattgct tcttcccttt caattctgcc gttggcttgg tggatgggcc gagcaacaga
      421 ggaactggcg gagcgactag gtgaagcgat tggcggactt ttgaatgcta ccttcgggaa
      481 tgccgccgaa ctcattatcg cgcttacggc tttgcaggct gggctccacg acgtcgtgaa
      541 agcgtcaatc gccggttcca tcattgggaa tatcttgctg gtgctcggcg ccgccatgtt
      601 ggccggaggc ctgcgtcatc ccgaacaaca cttcaatccg gctggcgccc gttcgcaggc
      661 gacgatgctc acgttggcgg cgattgcgtt agtcctcccg gcgacctttc aagctgcagc
      721 gaatacgaaa acagaagggc tcaaccgact cagcgtctcg atctccgtcg ttctcctagt
      781 cgcatatttg ctcaacctgg tgtacgcgct gatcactcat ccggcgctct tcgcgggctc
      841 ctatgtgccc gaaaaaggga aagcaaatat ctctgtgagg cgtgcctcag cggtccttgc
      901 tgcaaccact gcggggattg cttggatgag cgagattatg gtgaaggcga tcgagcccac
      961 ggtgcacgaa ctcggtctga gcgatttatt cgtcggtgtg ttcatggttg ctgttatggg
     1021 aaatgcggcc gagcatgcaa cggcaatcac tgcagcgcgc aaggaccgca tggacctatc
     1081 gctctcgatt gcgatcggct caagcgtgca agtggcgctc ctcgtgacac cggtcctggt
     1141 gttatcgagc ctcattttcg gtcccaggcc aatggacctt gcttttcccg ttggcctcgt
     1201 cgtgaccatt cttttatcgg ttttaataac gggccaaata gccggcgatg gacggtccga
     1261 ctggctcaag ggcgcacaac tcctcgtggt ttacttagtg ttggcgctgg ctttcttttt
     1321 cctgcctggc agctcgccat aattcgcagg caattgtgcc atctcgcggg cgaatctttg
     1381 cctcgctcta ccggcgccgg cggagattcc ggatcggcac ccatcgcgcc cggccggcgc
     1441 gatcgcaatc gccggcgcaa cgcgtcacgc ccggaacatt cggcagcgca gcgggttctc
     1501 attaacggac accgcgtttt taatcgaaat ggaatggacg acggatgaaa ggatcattcg
     1561 ccatcagctt gttgttcggg gccgcgatgt atgccgcctt agggctgttc gggctcgccg
     1621 tttttcacga cgcgggaccg gtcacgcgcg ccgtaagcga tgggtacggt attgcctacg
     1681 ccgcgatcgc cgccgcggac acgtccgcgg cgcaggccag gaaatagcga aggcgccctc
     1741 gcccgtcgct gcgccgttta cccgcccagc cgcacggcgg acacgcaagc cgcgggcctc
     1801 tttcagccga cttcttgatc tcgcgcgcgc aagggcgtag ccggcgaccg gtggcattgc
     1861 ggtccaggcc gcactaaact ggctggcagt ccgaatgacc ggcggaatgt ttgccatggc
     1921 gcacgaccac gatcacgatg accatgacgg gcacgcttcg gagctctccg agatgcagct
     1981 gcgcgtgcgc gccctcgaaa ccgtgctggc cgagaaaggc tatatcgatc cggccgcgct
     2041 cgacgtgatg atcgaggcgt tcgagaccca gatcggcccg cacaacggcg cccgcgtcgt
     2101 cgccaaggcg tgggccgatc cggcgttcaa gcgcgcgctg atcgaggacg cgaccaaggc
     2161 ggtgcaatcg ctcggcctga tcaaccgtgt cggcgatcac ctgatcgcgg tcgagaacac
     2221 tccgggactc cacaacgtca tcgtgtgcac gctgtgctcc tgctatcctt gggaagttct
     2281 cggcctgccg ccgatctggt acaaggcggc gccgtatcgc tcgcgcgcgg tcaacgatcc
     2341 gcgcggcgtg ctcgccgatt tcggcctgaa gcttccgacc gacacgcaga tccgggtgtg
     2401 ggactcgacc gccgagaccc gctttatcgt gctgccgatg cggccggcgg gcaccgaggg
     2461 ctggagcgag gacaaactcg cgaccttggt cacgcgcgac tgcatgatcg gcaccggcct
     2521 gccgaagaac ccggcggagg ctgcgtaatg gacggcattc acgacatggg aggcatgcac
     2581 ggcttcggca aagtcgaacc ggaacagaac gagccggtct ttcacgccgt gtgggaagcc
     2641 cgctgcctcg cgctcaaccg cgccatgggc gtgatcggcg cctggaccat cgacgaaggg
     2701 cgctccggca tcgagcagtt gccgccgcag gtttatctcg cgcactccta ctacggaaaa
     2761 tgggcgttgc gactggaaaa catggtcatc aaccgcgggc tcgccggcgc cgacgagatt
     2821 gccgctgggc acgcgttgcg ccccgggaag gccgtcaagc gcaagcttgg cgtcgccgac
     2881 gtcccccacg ccctgacgcg cggctcgttc ggccggcaag cgccggcccc ggcccgcttc
     2941 aaggtcggcc agcgggtgcg caccaaggtg atccacccgg caacgcatac gcgcctgccg
     3001 cgttacgcgc gcggccgcat cggcacgatc gaagccctgc gcggctgtca tgtgttcccc
     3061 gattcgaccg ccgtcggtgc tggggagaat ccgcaatggc tctacaccgt ggtgttcgac
     3121 ggccgcgagc tgtggggcga gaacaccgac ccgacgctca cggtctcgat cgatgcgttc
     3181 gagccgtatc tggaggcggc gtagtccgtc atctgtcagt tgcgaggcga ctaatcatgg
     3241 attccggcgc gcgctctctc cgctcgcttg gccgggacga cggcctcgat gtcccgcgcg
     3301 acgaagacgg cccggtgttt cgcgaaccct gggaagcgca ggccttcgcg ctggcgctgt
     3361 cgctccacga acgcggcgtg ttttcctggc aggaatggac agccgcgctc ggcgaggaaa
     3421 tcaaaaaggc gcaggcggcc ggcgaccccg ataccggcga gacctactac caccactggc
     3481 tcgccgcgct cgagcggctc gtggcagcga aggggcttgc cgacgcacag agcttggcgc
     3541 gcacccgcga cgcgtggcag cgcgcctgcg agcgtacgcc gcacggcatt ccgatcgcgc
     3601 tgcagccgga agatttcggc gaataggttt cgcgcgtcgg tccgggacgc ttccaagcag
     3661 cgcgcgactg cgcgcggcga atcagacgct gccgccgttg gcctgaattt gctccgcccg
     3721 gcgctcgcgg ttggtgcccc gctcgatcag atactcgcga tcgaggagct tgaccgaatg
     3781 attgaggtcc gactgcgcga tgagcacggc gacatccttg ccgcgcagca tgccgatgac
     3841 ttcggcgagg cgtcgcgaca gcgccggcgc gacgccctcg aagggttcgt ccagcagcag
     3901 gaggcgcgtg ccgatcgtca gcgcgcgcgc gagcgccacg agcttctgct ggccgccgct
     3961 tagcgccagc gccttgcgct ggcgcatcgt cgccacctcg ggcatgaggc cgtaggcatg
     4021 gtcgaggcgg ctcgccgcgt cgggcgcccg cgtggcccag ctcggcagca gaatgttctc
     4081 ctcgaccgtg agctgcggca ccaggcggcg gtcctcgggc atgtaaccga tgccgagcgc
     4141 ggcgcggcga taggtcggca gcgcggtcaa actctggccg gcgaagctga tatggccggc
     4201 gtttgcgccg acgaggccca tgaccgcgcg tagcgtcgtg gtcttgccgg cgccgttgcg
     4261 gccgacaagg ccgaccatct cgccggactg gaccgtcagg ctgacgccgc gcagcacctc
     4321 caccgcctgc agcttgacgc gcagggcgtc gatggtgagg agcgtcacgg cgcaactccg
     4381 gtcacgtagc gctggacctc ggcattgccg agcaccacgg ttggcgtgcc gtcggcaatg
     4441 acgcggccct cgtagaaggc gagcacgcgt tcggcatagc ggccgacgat ctccatgtcg
     4501 tgctcgacga agatgacggt cgcatcgcta ccctcgagcg cgcgcatgat cacgtccatc
     4561 agcgggaact tctcttcggc ggcgacgccg ctgcttggtt cgtcgagcag caacagcttg
     4621 ggttgatgcg tcaccgccat ggcgatgtcg acgagcttgc gcacgccgcc cggcaaggtt
     4681 gcaatcgtgt ggtggcgata ttcaccgagg cgaaagcgtt cgagcaggtc ctcgaggccg
     4741 gccatcatcg cgcccgaacg cgccggccgc cacgccgaca tacccttgtc atcggcgatg
     4801 ccgagcgcca tcagcaggtt ctcctcgggg gtcaggctgg cgaaaagctg cgggatctgg
     4861 aaggagcggc tgaccccctg ccggcgcaca cggcgcggag caagcccggt gatgtcggcg
     4921 ccgtcaagca cgacgcgccc ggcatcgggg cgcagatagc cggtgacgat gttgacgaag
     4981 gtggtcttgc cggcgccgtt gttgccgatg agacccagcc tttcgccgcg gcgcgcggcg
     5041 accgagatgt ccttggcggc gatgaccgcg ccgaaggatt tctgcaggcc ctcggtttcc
     5101 agaagcgcgg tcatttgacg ctctcgaccg gctttggcgc cggctttacc gcggtgcggc
     5161 ggcggcgccg taccagcgag cccaatccct ccggcagaaa cagaatgacg agcaggagaa
     5221 aaatgccgag cgccccttgc caggtgttgg ggaaatattg gctggagaac gagcgcacga
     5281 gttcgaggag caccgcggcg acgaacacgg cggtcacgct cgcgtacccg ctcaggatcg
     5341 cgaggaacac gaactcgccc gacgtcgtcc agaacgcgaa gtcagggtcg atgtggccga
     5401 gcgagagcgc ggcgagcgcg ccgccgatgc cgccgagcag gctcgaaatg atgaaattcg
     5461 tgccgctgac ccagcgcaca gaggctccca gatattcgac gcggatttca ttgtcccgcg
     5521 ccgccagcga cagcagtccg cggatcgaat cgaaatgaat gcggcagagc gcagcggcga
     5581 cggcggtcag caggctcgcg aggacgaaaa gcgcgtaact gacctcttgc gaggtctgcg
     5641 gctggtaggt gaggaaagtc ggcgcttgca gattgaggcc gtcagatccg ccgagcgaat
     5701 aggtcttgtc gagaatcccg taggcgatca tcgacagcgc caacgtcaat gtggcgaaga
     5761 agatgccgcg gtatccggcc aggagcggcg cgatgatgag cccgaggatg agggcaaggg
     5821 cgccgcccag cgcaaccagc aggaccgcgt cggtgacgcc gaggctgcgc atcgcaaggc
     5881 cggcggcgta gcctccggcg cagaagaaga tgccctgacc gaacgagacg aggccgccgc
     5941 gcataagcac gaccagtccg agcgcgacca ggcctttggc gaaagccaag gtggcgacga
     6001 gcacgaacca gtggggcagg atccgaccca gcaacgccaa tgccgcgaag gcgagaagcg
     6061 cggcgccgag ggtgccgaca cggccggtca ttagatcttc cgcgtcgtcg tgcgctggaa
     6121 gagcccctcg ggccgcagcg ccagcaccag tgccatcacc agatagacga tgaacaactc
     6181 cgccgagggc atcaggtgaa tggccgcggc acgcgcgagg ccgactatca gagcggcgat
     6241 cgccgccccc tcgacgctgc cgaggccgcc gatgaccacg acggcgaagc tgagcaggat
     6301 gaccgagatg ctgatgcccg gctgcaccga gattttcggc gcggtgaagg cgccgcccag
     6361 cgccgccagg aacaccccga aggtgaaggc gaccacgaag acgcgggtga cattgacccc
     6421 catggcgccg ctgatgtcgc gatcatggat caccgccagg accaccttgc cgctgatggt
     6481 gcggttgagc ccgagccaca gcaggacacc ggtgagcagc gccaggccga ccagcgcgaa
     6541 atcgtatccg acatagctca atccgaagac cgaaacgttg ccgaggaggc cgtagggctc
     6601 gtacgcgtag taggggttga ccccccagat cagcttggtc gcgtcttcga gaatgaggaa
     6661 gagcgcgtag gtcacgagca cgatcaccac ctcatcgcgg cgatagaaga ggcgcagcac
     6721 gccgcgctcg aggagcggcc ccatcgcgac cgcgaccaag agcgccgcgc cgagcatcac
     6781 gaaatagccg aggaaggccg gccc
//
LOCUS       DATMQB010000448         4115 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4247651, whole genome shotgun sequence.
ACCESSION   DATMQB010000448 DATMQB010000000
VERSION     DATMQB010000448.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4115)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4115)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4115
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4247651"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..267
                     /locus_tag="VNY79_12965"
     CDS             <1..267
                     /locus_tag="VNY79_12965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="disulfide bond formation protein B"
                     /protein_id="HWX73404.1"
                     /translation="AALCGAALGTYHSGVEWRWWPGPTDCSGPMTDFTAKGPLLEQLQ
                     SVHVVRCDEAAWRFLGLSLAGYNVLISLALAALAVCGLRAPMHR"
     gene            420..782
                     /locus_tag="VNY79_12970"
     CDS             420..782
                     /locus_tag="VNY79_12970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014494642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YidB family protein"
                     /protein_id="HWX73405.1"
                     /translation="MGLLDSLGGVLKGAMGEAEAAALPALVNAVLAKTQYHDLNGLVA
                     ALQQGGLDTQVKSWLGNGTNLPISGEQLKAVLGSAQVQEFARHLGLPVDQTLELLAKY
                     LPEIVDKASPNGTLQPST"
     gene            841..1083
                     /locus_tag="VNY79_12975"
     CDS             841..1083
                     /locus_tag="VNY79_12975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012115362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73406.1"
                     /translation="MKTTSIIILASFCLAGGALADSCKDEAASKKLAGAAMTSFMTKC
                     KKDAQATCDAQAADKKLSGAAKTSFTKKCVSDATGT"
     gene            1157..1606
                     /locus_tag="VNY79_12980"
     CDS             1157..1606
                     /locus_tag="VNY79_12980"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73407.1"
                     /translation="MKTHLLITSGILLAALSIVPFPAHAKTMKECAAQWKDMKAANQT
                     AGMKYRDFSKQCMSGEAAPAAETAPATGTAPATAAPAPAAPPAAGTTPAAAPAAKPSP
                     GHEAMVARERTCGAEWKADKAAGKIQEGMKWPQYWSACNKRKKAEGM"
     gene            complement(1662..1736)
                     /locus_tag="VNY79_12985"
     tRNA            complement(1662..1736)
                     /locus_tag="VNY79_12985"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.12"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1702..1704),aa:Val,seq:gac)
     gene            complement(1806..2735)
                     /locus_tag="VNY79_12990"
     CDS             complement(1806..2735)
                     /locus_tag="VNY79_12990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010909131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-keto-5-aminohexanoate cleavage protein"
                     /protein_id="HWX73408.1"
                     /translation="MANKIIISCAITGSIHTPTMSEALPITPDQIATQAVDAAKAGAA
                     ILHLHARDPKDGRPSPDANVFMQFLPRIKQGCDAVVNITTGGAVTMTVEQRISAAQQL
                     SPEMCSLNMGSMNFALYPMARRYKTWKYDWEEGYLLNSDAYIFPNTFRDIEKISKLLG
                     EGHGVKFEYECYDTGHLYNLAHCIDRGLFKPPVFLQLIFGILGGIGADLDNLLFMKRT
                     ADRLFGNQYYWSVLAGGRHQMNFCTNAAMMGGNVRVGLEDSLYIGPGKLAKSNAEQVA
                     KIRRIVEELGYEIATPGEARTLLGLKGADRVQF"
     gene            3084..3683
                     /locus_tag="VNY79_12995"
     CDS             3084..3683
                     /locus_tag="VNY79_12995"
                     /inference="COORDINATES: protein motif:HMM:NF021438.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2147 domain-containing protein"
                     /protein_id="HWX73409.1"
                     /translation="MSVKVLTFAAAFASLVVVAGQALSAEPTPVGLWQAVDDDTKQPT
                     GWFLIRDHGGVYDGIIAKMFLKPGEDPNEPCVQCKDDRHNHPWLGLEIIRGMKPEGEN
                     KYGSGTILDPRDGKIYKATMKVTPDGQTLIVRGYIGFELLGQNQYWTRLPDSAYSALD
                     PAVNPNPAANPNPAVNPKRPAPPRKSETPLPKPESIVCR"
     gene            complement(3696..>4115)
                     /locus_tag="VNY79_13000"
     CDS             complement(3696..>4115)
                     /locus_tag="VNY79_13000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hopanoid biosynthesis-associated RND transporter
                     HpnN"
                     /protein_id="HWX73410.1"
                     /translation="AVLLWITLRRLGDVLLTLIPLLVAGVVTLEICVAIDMPLNFANI
                     IALPLLLGVGVAFKIYYIMAWREGQTRLLQSVLTRAVTFSACATATAFGSLYFSSDPG
                     TSSMGKLLAISLLTTMAAAALFQPVLMGKPREDQPGS"
BASE COUNT          799 a         1305 c         1293 g          718 t
ORIGIN      
        1 gcggcccttt gcggcgccgc gctcggcacc taccattccg gcgtcgagtg gcgctggtgg
       61 ccgggtccga ccgattgctc aggcccgatg accgatttca cggcaaaagg gccgctgctc
      121 gagcagttgc aatcggtcca cgtggtgcgc tgcgacgagg cggcttggcg ttttctcggc
      181 ctgtcgctcg ccggttacaa cgtcttgatc tcgctcgcat tggcggcgct cgcggtctgc
      241 ggcctgcggg cgccgatgca ccggtagtca acgattttct tcgaggtttt tgaaagatca
      301 atcggcaatc gcagcgcctc cacccggctg gcgccgctcg tcggattcga ttagccttac
      361 gtcgtgtttt tgacacggct ttgtcgtagc gatcacactc ccgtctgatg gaggccatca
      421 tgggtttgtt ggacagcctc ggcggcgtgc tcaagggcgc catgggtgag gccgaagcgg
      481 cggctttacc ggcactggtc aacgccgttc tcgccaagac gcaataccac gatctcaacg
      541 ggctcgtggc ggcgctgcag cagggcggcc tcgacacgca agtcaaatcc tggctcggca
      601 acgggaccaa tcttccaatc agcggagagc agctgaaggc ggttctcggc agcgcccagg
      661 tccaggaatt cgcccggcac ctcgggctgc cggtcgacca gacgcttgag ctgctggcga
      721 aatacctgcc ggagatcgtg gacaaggcat cgccgaacgg aacgctgcag ccgagcacgt
      781 agcgcgacgc gcacgccgaa cgtttgccga ttttgaacaa ggccaactcg ggagaagcac
      841 atgaagacca catcaattat cattctcgcc tcgttttgcc tggccggcgg cgcgctggcg
      901 gattcctgca aggatgaagc ggcgagcaag aagcttgctg gggctgcgat gacgagcttc
      961 atgaccaaat gcaagaagga cgcgcaggcg acctgcgatg cgcaggccgc cgacaagaag
     1021 ctgtcgggtg cggcgaagac gagcttcacc aagaaatgcg tgtcggacgc aaccggcacc
     1081 tgagctcggc cccaggaggc gctccgcggg gcgcgcctcc cctgtttttc acgcctcaat
     1141 accggagact tgcatcatga aaactcatct cctgatcacg tcgggaatat tgcttgccgc
     1201 tctctccatc gtgccgtttc cggcgcacgc caaaaccatg aaagagtgcg ccgcccagtg
     1261 gaaggatatg aaagcggcca accagaccgc cggcatgaaa tatcgcgatt tcagcaagca
     1321 gtgcatgtcg ggcgaggcgg cgccggcggc cgaaaccgcg ccggcgaccg gaacggcgcc
     1381 cgccacggca gcgcctgcgc ctgctgcccc accggcggcc ggaacgacgc ccgccgcagc
     1441 gccggcagcg aagccgtcgc cgggtcatga ggccatggtc gcaagggaac gcacgtgcgg
     1501 cgccgaatgg aaagcggaca aggccgccgg aaagatccag gagggaatga agtggccgca
     1561 gtactggagc gcgtgcaaca agcgcaagaa ggccgaggga atgtaagcgc cgcgatcttc
     1621 ggcgtgccgg cggcgcaact gcgagcccgg gatgaggggc gtggtgggcg gtgcagggat
     1681 cgaacctgcg accccatcca tgtcaaggat gtgctcttcc gctgagctaa ccgcccggtc
     1741 cggtctcacg atttagcgtc gccgcgcctg cggggtcaag gccgcggctg cggcgcatcc
     1801 gcggatcaaa attgcacgcg atccgcgccc ttgaggccaa gcagggtgcg cgcctcgccc
     1861 ggcgtcgcga tctcgtagcc cagctcctcg acgatgcggc ggattttcgc cacctgctcg
     1921 gcgttgctct tggcgagttt gcccgggccg atatagagcg aatcctcgag accgacgcgc
     1981 acgttgccgc ccatcatcgc ggcgttggtg cagaagttca tctggtggcg gccgccggcg
     2041 agtaccgacc agtagtattg attaccaaac agacggtcgg cggtgcgttt catgaacagg
     2101 agattgtcga gatcggcgcc gatgccgcca agaatgccga agatcagctg caaaaacacc
     2161 ggcggcttga acagcccgcg atcgatgcag tgggcgaggt tgtacaggtg tccggtgtcg
     2221 tagcattcgt actcgaactt gacgccgtgg ccttcgccga gcagcttcga gatcttctcg
     2281 atatcgcgaa aagtattggg gaagatgtag gcgtcggaat tgagcagata accttcctcc
     2341 cagtcgtatt tccaggtctt gtagcgccgc gccatcggat agagcgcgaa gttcatcgac
     2401 cccatgttga gcgagcacat ttccggcgag agctgctgtg ccgccgaaat gcgctgctcc
     2461 accgtcatgg tcaccgcccc tccggtggtg atgttgacga ccgcatcgca gccttgcttg
     2521 atccgcggca ggaactgcat gaacacgttg gcgtcgggcg acggccgccc atccttcggg
     2581 tcgcgcgcgt gcaaatgcag tatcgccgcg cctgccttgg cggcatcgac cgcttgggtc
     2641 gcgatctgat cgggcgtgat cggcagcgcc tccgacatcg tcggggtatg gatcgagcct
     2701 gtgatcgcgc aactgatgat gatcttattg gccatggtcg cagcttccct ttcgccggtg
     2761 ccctatcagt tgatctttcc ccgccggcgt cagcatcgcg ccgcctcgcg cagattgtgg
     2821 cagatttgcc gcatctggct catacccagc ccgattcacc acgtttcagc cgccctacac
     2881 aactgccgcg ccgcgatgcg tcctagcatt gtcatcggaa gcgcttatgt cattgatact
     2941 gcgcaagcat tgggctccgg gccagccggc agggagccgg gcggagaacc catagaatca
     3001 tcacgtagag cgcaataatc ggcctttccc ggtaccatac ttacgggcaa aggcttgacc
     3061 ggttcaaatc tggagcccca gccatgtcag tcaaggtttt gacctttgcc gccgcgttcg
     3121 catcgctcgt cgtcgtcgcc ggccaagctc taagcgcgga gccgacgccc gttggcctct
     3181 ggcaggcggt cgatgacgat accaagcagc ctacaggctg gttcctgatc agagatcatg
     3241 gcggcgtata cgacggaatc atcgccaaga tgttcctgaa gccgggcgag gatcccaacg
     3301 aaccctgcgt ccagtgcaag gacgaccggc acaatcatcc ctggctcgga ctggagatca
     3361 tccgcggcat gaagccggag ggcgaaaaca agtatggaag cgggacgatc ctcgatccgc
     3421 gcgacggcaa aatctataaa gcgacaatga aggtaacccc cgacggccag acgctgatcg
     3481 tgcgcggcta tatcggcttc gagctgctgg gccagaatca atattggacg cggctgccgg
     3541 attccgccta cagcgcgctc gatcccgccg tcaatcccaa tcctgccgcc aatcccaatc
     3601 ccgccgtcaa cccaaagcgc ccggcgccgc cgcgcaaatc ggaaacgccg ctgccgaagc
     3661 cggaaagcat cgtttgccgc tgaggccgct cgcgatcacg agccaggctg atcttcgcgc
     3721 ggcttgccca tcagcaccgg ctgaaacagc gccgccgccg ccatggtggt cagcagcgag
     3781 atggcgagga gcttgcccat gctcgaggtc ccgggatcgc tggaaaagta gaggctgccg
     3841 aaggcggttg ccgtcgcgca ggcgctgaac gtcaccgccc gcgtgagcac cgactgcagc
     3901 agcctggtct gcccctcgcg ccaagccatg atgtagtaga tcttgaacgc cacgccgacg
     3961 ccgagcagca gcggcagcgc gatgatgttg gcgaaattca gcggcatgtc gatcgccacg
     4021 cagatttcca gcgtcaccac gccggcgacc agcagcggga tcagggtcag gagcacatcc
     4081 ccgaggcgcc gcaacgtgat ccacaacagc acagc
//
LOCUS       DATMQB010000449         8131 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3336018, whole genome shotgun sequence.
ACCESSION   DATMQB010000449 DATMQB010000000
VERSION     DATMQB010000449.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8131)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8131)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8131
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3336018"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1275)
                     /locus_tag="VNY79_13005"
     CDS             complement(<1..1275)
                     /locus_tag="VNY79_13005"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HWX73411.1"
                     /translation="MGRHRTKSRKPAKARRHKTPKIKRFNVRSAASSEKLSVADAELR
                     EQVSTLTNELARRTADLTESLAQQTATAEVLKVISSSPGDLQPVFEAMLEKAARICDA
                     QSGSIYRWDGDVLHLAATYRTRRAFVESRRWSAVRPDPKLPMGRAVFGKTVVHVYDAA
                     ADEAYTKQRHPAFVAAVELGGVRTFLFVPLLKDSELLGVFSLYRQEVHPFTDKQIELV
                     TTFTDQAVIAIENARLLREPRERTKEVVKLNQHLEQRVADQVDEIKRTGRLRRFLPPQ
                     VADLIVASGTEKQLESHRREITALFCDLRGFTGFTEIADAEDVMALLRDYHAAIGEII
                     IKYNGTLERYAGDGVMIIFNDPIPVSNPALQAVQMALEVREAMGALTEKWGQLGHEVG
                     FGIGIAHGYATLGTIGFEGRFDYAAIGTVSNVA"
     gene            complement(1506..2450)
                     /locus_tag="VNY79_13010"
     CDS             complement(1506..2450)
                     /locus_tag="VNY79_13010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX73412.1"
                     /translation="MRRRNFITLLGGAAAWPLAARAQQAGRTHRLGWLLPLTRDAPVN
                     VAFFDELRRRGFIEGQNLTVEYRPWALHFDLVSQYAAELVKARVDVIITGGEETLRAA
                     QEATKTIPILALAEDLLGSGFVNSMARPNGNTTGVSILANVLDGKRQEILIEAVPGLR
                     HMAALADSNTTAVAKLDALQKAAGARNIELSIHQVARGEEIETAIAMAKASGATALNV
                     LASPLLYANRQLIIDRTAALRLPAIYEFPETAEEGGLVAYGSRLSELFLEVMPRQLAE
                     LFRGVKVVDIPVEQPTKFELVINLKTAKAMGVTVPEAL"
     gene            complement(2799..3713)
                     /locus_tag="VNY79_13015"
     CDS             complement(2799..3713)
                     /locus_tag="VNY79_13015"
                     /inference="COORDINATES: protein motif:HMM:NF024206.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ankyrin repeat domain-containing protein"
                     /protein_id="HWX73413.1"
                     /translation="MTRPLAVLCALVLAAPAAIATARADEDCGDLGRNYQLIEREAVS
                     VQTNMALISAADRGCEALARQLLDAGASLLARDRHGDMALAHAARGGQIKLVELFLAA
                     GAPIDARNVEGGTALYAAADAQKPSTVALLLAKGADPNLTGRTGLTPLIAAAFKGNDR
                     IAEALIAHGADPNARDTYGKGAIVYAAARGFDEIVRRLLDAGVDGSARYGNDLTALMW
                     AAGHDEGVGAASVERVVDLLLAHGGRLDDADNRGRTALMIAAELGYAPTVDLLLKRGA
                     DRTLKDREGKTALDLAKNAEVRERLAAR"
     gene            complement(3824..4492)
                     /locus_tag="VNY79_13020"
     CDS             complement(3824..4492)
                     /locus_tag="VNY79_13020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011475274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TlpA disulfide reductase family protein"
                     /protein_id="HWX73414.1"
                     /translation="MTERSAPPRAALARRRLISVAAAAVILAVLAGVYGIARLRSNPA
                     AGACAAAVAAAGRLAPLAHGEVAALAVAQAPFLVPDLAFKDADGRERTLKDWRGRTVL
                     LNLWATWCVPCRKEMPALDVLERELGGPRFEVVAVNIDTRNPDKPRSFLRSVDVKHLA
                     YYSDPSAKVFQELKSAGKAFGMPTTLIVDGNGCELGAMAGPAEWASADGVKLVSAAIA
                     GGPD"
     gene            4520..5908
                     /gene="argH"
                     /locus_tag="VNY79_13025"
     CDS             4520..5908
                     /gene="argH"
                     /locus_tag="VNY79_13025"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011160275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004056 - argininosuccinate lyase activity
                     [Evidence IEA];
                     GO_process: GO:0042450 - arginine biosynthetic process via
                     ornithine [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HWX73415.1"
                     /translation="MSNKMWGGRFGSESDPVMEEINASIDFDRHLYRQDIAASKAHAA
                     MLAQKGIITAQDAKSIAHGLDTILSEIEAGKFAFQRALEDIHMNVESRLAELIGPAAG
                     RLHTARSRNDQVATDFRLWVRDAIDEIDAALAAYQRALAQKAIDHAATVMPGFTHLQT
                     AQPVTFGHHLLAYVEMAARDRGRLADARKRLNESPLGAAALAGTSFPIDRIMTAKALG
                     FAQPMANSLDAVADRDFVLETLSASAICAVHLSRFAEEIVIWSSPLAGLVRLSDKFTT
                     GSSIMPQKRNPDAAELVRAKAGRIVGALTALLVVMKGLPLAYQKDMQEDKEGAIDAFA
                     ALRLSIAAMTGMVRDMEPDAARMRQAAAEGYATATDLADWLTRALKLPFREAHNVAGR
                     IVAKAAEAGLPLEKLPLEIMQAIEPRITKAVFGVLSAEKSVESRTVYGGTAPRNVRAQ
                     AKRWLKRLQKAP"
     gene            5961..6290
                     /locus_tag="VNY79_13030"
     CDS             5961..6290
                     /locus_tag="VNY79_13030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007615309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoprotein"
                     /protein_id="HWX73416.1"
                     /translation="MLSRGFVGWPLAFRRSIPLLGMAAVAALSLSACGRNGSLEIPPG
                     PIGFQPAPAALSAPPPGPVASAPADASAAQPTSQETIAKTGFDPHGNPAATPGQKKPF
                     LLDPLLQ"
     gene            6407..7672
                     /gene="lysA"
                     /locus_tag="VNY79_13035"
     CDS             6407..7672
                     /gene="lysA"
                     /locus_tag="VNY79_13035"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008836 - diaminopimelate decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HWX73417.1"
                     /translation="MHHFAYRDGVLSAEAVDLVTLAEAVGTPFYCYASATLERHYRVF
                     AGAFADVDALVCYSLKANSNQAVIATLARLGAGADVVSEGELLRARAAGVAREKIMFS
                     GVGKTGRELALAVEEGVLCVNVESEAELELLAAIAAGKGRSADISIRVNPDIDPKTHA
                     KIATGKAENKFGIPISRAREVYARAARLGGVRVVGVDMHIGSQITELDPFGDAFALLA
                     DFVAVLRADSHAITHLDLGGGLGIPYREDNAPPPDPDAYAAVVKRATRGLGCRLIFEP
                     GRLIVGNAGILVTRVLYVKRGEAKTFVIVDAGMNDLVRPTLYDAHHDIRPVREPAAGA
                     PRIIADIVGPVCESGDFIALDRSLVAPQPGDLLAIMSAGAYGAVQAGTYNSRALVPEV
                     LVRADEWALVRPRVTAAELIALDRLPAWL"
     gene            7862..>8131
                     /locus_tag="VNY79_13040"
     CDS             7862..>8131
                     /locus_tag="VNY79_13040"
                     /inference="COORDINATES: protein motif:HMM:NF025152.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4175 family protein"
                     /protein_id="HWX73418.1"
                     /translation="MRRARWTIFWERLWPALATLATAAGLFLAISWLGVWLWLPPVGR
                     AAAVLAFAVIALAAAVPFVFVRVPAIADGLRRLDHASGLRHRPATA"
BASE COUNT         1387 a         2684 c         2608 g         1452 t
ORIGIN      
        1 tgcaacgttg gatacggtcc caatagccgc atagtcgaag cgtccttcaa aaccaatcgt
       61 gcccagagtc gcatatccat gcgcaatgcc gataccaaag ccaacctcgt gccctaactg
      121 accccacttc tcagtcaagg cacccatagc ctcacgcacc tccagcgcca tttggacagc
      181 ttgcaaagcg gggttggata ctggaattgg gtcgttgaaa atgatcatga ccccgtcacc
      241 tgcatagcgc tcgagagtgc cattgtactt gatgatgatt tcgccgatgg ctgcgtggta
      301 gtcgcgcagc aacgccatca cgtcttccgc atccgcgatt tcagtgaacc cggtgaagcc
      361 acgcaaatca cagaagagcg ccgtgatctc acgccgatga ctttcgagct gcttctctgt
      421 tcccgacgca acgatcagat cggcgacctg aggaggcaga aagcgtcgga gtcgacctgt
      481 ccgctttatt tcgtcgactt gatcggcaac acgttgctcc aggtgctgat ttaatttcac
      541 cacctctttg gttctctcgc gcggttccct gagcaatcgc gcattctcga tggcgatgac
      601 cgcctggtca gtgaaggttg tgaccagctc aatctgctta tcagtgaagg ggtggacttc
      661 ttgacgatat aagctgaaca cgccaagcag ttcgctatct ttcagtagtg gcacaaacag
      721 aaacgtccgc acgcctccaa gttcgaccgc cgcgacgaat gccggatggc gttgcttcgt
      781 ataagcttcg tccgcagcgg catcataaac gtgaacaacg gttttgccga acaccgctcg
      841 acccatcgga agtttgggat cgggacggac cgccgaccat ctgcgagatt caacaaaggc
      901 tcgccgagta cgatacgtag cggcgaggtg cagaacatcg ccgtcccaac gatagatgct
      961 gccagactga gcgtcgcaga tccgcgccgc tttctccagc atggcttcga acacgggctg
     1021 cagatcaccc ggagaactgc tgatgacctt cagcacttcc gcggttgcgg tttgctgcgc
     1081 caacgactcg gtgaggtcgg cggtgcgtcg ggccaactca ttcgtgagcg tgctgacttg
     1141 ttctcgaagc tcagcatcag cgacagagag cttctcgctg cttgcagcgc ttcgcacatt
     1201 aaagcgcttg atcttcggag tcttgtgccg ccgcgctttc gctggcttac ggctcttagt
     1261 gcgatgccgt cccactgtgg ccctctctcg gacggcccag cctaccaatc ggcaggacgg
     1321 ttgtgcagca cagcaaatca gcgcaggcaa gtgtccagaa gggtcattca gcggcatggc
     1381 agcgagtccg cgccacttcc gctcttcccc ctcaaagcag acatgcgcga acgcgatagg
     1441 cacgccagtt tagggccaca aggcgacatc acgaccattc actcgatcac cttgtcggcg
     1501 cgtgcctata atgcctctgg aaccgtcaca cccatcgcct tagcggtctt gagattgatc
     1561 accagctcga acttggtcgg ctgttcgacc gggatgtcga caactttgac gccgcggaag
     1621 agctcggcga gctgtcgggg cattacctct aaaaagagct cactgaggcg tgatccgtag
     1681 gcgacaaggc cgccttcctc cgccgtttcg ggaaactcat agatcgccgg caggcgcaac
     1741 gctgcggtgc ggtctataat gagctgacga ttggcataga gtagcggtga cgccaaaaca
     1801 ttcagcgctg tagcgcccga tgccttcgcc attgcgatgg ccgtttcgat ttcctcgcct
     1861 ctggcgacct gatgaattga aagctcgatg ttgcgagcgc ccgctgcttt ctgcaatgcg
     1921 tcgagcttag caactgcggt cgtgttggaa tcggcaaggg cggccatatg gcgaagtcct
     1981 ggcaccgctt cgatcagtat ttcctgtcgt ttgccgtcaa gcacgttcgc gaggatgcta
     2041 acgccagttg tgttcccgtt tggccgtgcc atcgagttca cgaaaccaga cccgagcaaa
     2101 tcttctgcga gcgcaaggat cgggatcgtt ttagtcgcct cctgagcagc gcgaagtgtc
     2161 tcctccccgc cggtaatgat gacatcaacc cgagctttga ccagctccgc cgcatattgc
     2221 gaaaccagat caaagtgtag ggcccatggg cgatattcga ccgtgaggtt ttggccttca
     2281 atgaaaccgc gccgtcgcag ttcatcgaaa aaagcaacgt ttacaggtgc atcgcgcgta
     2341 aggggtaaca accagccgag acgatgggtt cgccccgctt gctgcgcccg cgccgcgagc
     2401 ggccatgcgg ctgcgccgcc gagaagagtg ataaaattgc gtcgcctcat gactcccctc
     2461 aagccgagga tcgtacccta ccacattgtc gaatgagagc cgtatggtgc atcacagcaa
     2521 acttggccgc cgatgaccgc taagggtcgt gtgcgaccga ttcagcgtgg ctccggatgt
     2581 ccgctatccc tcagattgtg ttgcaaaagt ccctgtgggg gcacccgatc aaggaaaaac
     2641 ggcaatagta gaatccgaaa ggccggttct gtgaatcaaa tttccgcgct ttggtttgct
     2701 tcgggaaaaa tgttctttgc gcaaaggcta aaaatagttt tgcaacacaa tccctcagga
     2761 accagacatc gggaccgcag gcgttatgag tacgcgcgct agcgcgccgc cagccgctcg
     2821 cgcacctcgg cgttctttgc cagatcgagg gcggtcttgc cttcgcggtc cttgagcgtg
     2881 cggtcggcgc cgcgcttgag cagaaggtcg acggtcgggg catagccgag ctcggcggcg
     2941 atcatcagcg cggtgcggcc gcgattgtcg gcgtcatcga ggcgcccgcc gtgcgcgagc
     3001 aaaagatcga cgacgcgctc gaccgacgcc gcgcccacac cctcgtcgtg tcccgccgcc
     3061 cacatcagcg cggtgaggtc gttgccgtag cgcgcgctgc cgtcgacgcc ggcgtcgagc
     3121 agccggcgca cgatctcgtc gaaaccgcgc gccgccgcat agacgatggc gcccttgccg
     3181 taggtgtcgc gcgcattcgg atcggcgccg tgcgcgatca gcgcctcggc gatgcggtca
     3241 ttccctttga aagcggcggc gatgagcggc gtcagcccgg tgcggccggt gaggttcggg
     3301 tcggcgcctt tcgccagcag caacgccacg gtcgagggtt tttgcgcgtc ggcggcggcg
     3361 tagagcgcgg tgccgccctc gacattgcgc gcgtcgatcg gcgcgccggc ggcgagaaac
     3421 agctcgacca gcttgatctg gccgccgcgc gcggcgtggg cgagcgccat gtcgccgtgc
     3481 cggtcgcgcg ccagcagcga ggcgccggca tcgaggagct gccgcgccag cgcctcgcag
     3541 ccgcggtcgg cggccgagat cagtgccatg ttggtctgca ccgacacggc ttcacgctct
     3601 atgagctgat agttgcggcc gaggtcgccg caatcctcgt cggcgcgcgc cgtcgcgatg
     3661 gcggcgggcg cggcgaggac gagggcgcaa aggacggcga gaggtctggt catggaacgt
     3721 ggctggccgg gttggagcga ttgtcgttgg cgggggtgaa gcatgacgat agccggaatc
     3781 ggcgagcgcg cgaacagccg tccgcgaccg ccgccggcgc gcttcaatcc gggccgccgg
     3841 cgatggcggc gctgacgagc ttcacgccgt cggcgcttgc ccactcggcg ggtccggcca
     3901 tggcgccgag ctcgcagccg ttgccgtcga cgatcagcgt cgtcggcatg ccgaaggcct
     3961 tgccggcgga tttgagctcc tgaaacactt tcgcgctcgg gtcggagtag taggccaagt
     4021 gcttgacgtc gacgcttctg agaaacgacc gcggcttatc gggattgcgg gtgtcgatat
     4081 tgacggcgac tacctcgaac ctgggcccgc ccagctcccg ctcgagcacg tcgagcgccg
     4141 gcatctcctt gcggcagggc acgcaccatg tcgcccacag gttgagcagc acggtgcggc
     4201 cgcgccaatc cttcagtgtc cgctcgcggc cgtcggcatc cttgaaggcg agatcgggaa
     4261 cgaggaatgg cgcctgggcg accgcgagcg cggcgacttc gccgtgcgcc agcggcgcga
     4321 gccggccggc ggccgcgacc gcggcggcgc aggcgcccgc cgccggattg cttcgcagac
     4381 gcgcaatccc gtataccccc gccagcaccg ccaggatgac ggcggccgcc gcgacggaaa
     4441 tgaggcggcg gcgcgcaaga gcggcacgcg gcggggcgga tcgctcggtc atcgacggac
     4501 aaacctcggc ggacgcatca tgagcaacaa aatgtggggc ggacgcttcg gttcggagag
     4561 cgatccggtc atggaggaga tcaacgcctc gatcgatttc gaccggcacc tctaccggca
     4621 ggacattgcc gcgagcaagg cccatgcggc aatgttggcc cagaagggca tcatcacggc
     4681 gcaggatgca aagagcatcg ctcacggtct agacacgatc ctgtcagaga tcgaggccgg
     4741 caagttcgcc ttccagcgtg cgctggagga catccacatg aacgtcgaaa gccggctcgc
     4801 ggaactgatc gggccggccg ccgggcgcct gcataccgcg cgctcgcgca acgatcaggt
     4861 cgcgaccgac ttccggctct gggtgcgcga cgccatcgac gagatcgacg ccgcgctcgc
     4921 ggcctatcag cgggcgctgg cgcagaaggc gatcgatcac gcggcgacgg tgatgccggg
     4981 ctttacccat ctgcagacgg cgcagccggt gacgttcggc catcatctgc tggcctatgt
     5041 ggagatggcg gcgcgcgacc gcggccgcct cgccgatgcg cgcaagcggc tcaacgaaag
     5101 cccgctcggc gccgcggcgc tcgccggcac gtcgtttccg atcgaccgga tcatgacggc
     5161 gaaggcgctc ggctttgccc agccgatggc gaactcgctc gatgccgtcg ccgatcgcga
     5221 cttcgtgctg gagacgcttt cggcctctgc catctgcgcc gtgcatctct cgcgctttgc
     5281 cgaggagatc gtgatctggt cctcgccgct tgccggcctc gtgcgtctgt ccgacaagtt
     5341 caccaccggc tcctcgatca tgccgcagaa gcgcaacccg gacgcggcgg agctcgttcg
     5401 cgccaaggcc ggccgcatcg tcggcgcgct cacggcgctg ctcgtggtga tgaagggcct
     5461 gccgctcgcc tatcagaagg atatgcagga ggacaaggaa ggcgcgatcg acgccttcgc
     5521 ggcgcttagg ctttcgatcg cggccatgac cggcatggtg cgcgacatgg agcccgacgc
     5581 cgcgcgcatg cgccaggccg cggccgaggg atacgccacc gcgaccgacc ttgccgactg
     5641 gctcacgcgc gcgctcaagc tgccgttccg cgaagcgcac aatgtcgccg gccggatcgt
     5701 cgccaaggcg gcggaggccg gcttgccgct cgagaagctg ccgctcgaaa tcatgcaggc
     5761 gatcgagccg cggatcacca aggcggtctt cggcgtgctt tccgcagaaa aatccgtgga
     5821 aagccggacg gtctacggcg gcacggcgcc gcggaacgtg cgtgcgcagg ccaaacgctg
     5881 gctcaaacgg ctgcaaaaag ccccgtaaac gcgctggcaa gggttttcga caaaatgtcg
     5941 ccttggctgt gcgatctgct atgctgtcgc gaggcttcgt ggggtggccc ttggcttttc
     6001 gtcgctcgat accgcttttg gggatggccg ctgtcgcggc gctgagcctg tccgcctgcg
     6061 ggcgcaacgg ctcccttgaa attccgcccg gaccgatagg ctttcaaccg gccccggccg
     6121 ccttgagcgc gccgcccccc gggccggtcg cttccgcgcc tgccgatgca tccgcagcgc
     6181 agccaacgtc gcaggagacc attgccaaga ccggcttcga cccgcacggc aaccctgcgg
     6241 ccacgccggg ccagaagaaa ccatttcttc tcgacccgct gctgcagtag ggggtcgcga
     6301 ttccacgccg cagaggcgga cgctcgcttc tggtcccagt cgtcgatcgg cagtcccttc
     6361 ggacgaccgg tttccactct tccggctgat gctctaaaca cgcgccatgc atcacttcgc
     6421 ctatcgcgac ggcgtgctca gcgccgaggc cgtcgatctg gtcacgctgg ccgaggcggt
     6481 cggcaccccg ttctactgct atgcgagcgc gaccttggag cggcactacc gggtgttcgc
     6541 cggcgccttc gccgacgtcg acgcgctcgt ctgctactcc ctgaaggcca actccaacca
     6601 ggcggtgatc gcgacgctcg cccggctcgg cgccggcgcc gacgtggtct ccgaaggcga
     6661 gctgttgcgc gcccgcgccg ccggcgttgc gcgggagaag atcatgttct ccggcgtggg
     6721 caaaaccggg cgcgagctcg cactcgcggt cgaggagggc gttctctgtg tcaacgtcga
     6781 gtctgaagcg gagctcgagc tgttagcagc gatcgcggcc ggcaagggcc gctccgccga
     6841 catctcgatc cgggttaatc ccgacatcga cccaaaaacc cacgccaaga tcgcgaccgg
     6901 caaggccgag aacaagttcg gcattccgat cagccgcgcg cgcgaagtct acgctcgcgc
     6961 cgcccggctc ggcggcgtac gtgtcgtcgg cgtcgacatg catatcggca gccagattac
     7021 cgagctcgac ccgttcggcg acgccttcgc gctgctcgcc gatttcgtgg cggtgctgcg
     7081 cgccgacagc cacgccatca cgcacctcga tctcggcggc ggcctcggca ttccctaccg
     7141 cgaggacaac gcgccgccgc ccgacccgga cgcctatgcg gcggtggtca agcgggcgac
     7201 gcgcgggctc ggctgccggc tgatcttcga accgggccgc ctcatcgtcg gcaatgccgg
     7261 cattctggtc acgcgcgtgc tctatgtgaa gcgcggcgag gccaagactt tcgtcatcgt
     7321 cgatgccggg atgaacgatc tcgtccgccc cacgctctac gacgcgcacc acgacatccg
     7381 cccggtgcgg gagccggccg cgggcgcgcc gcgaatcatc gccgacatcg tcgggccggt
     7441 gtgcgaatcc ggcgatttca tcgcgctcga tcgttcgctc gtcgcgccgc agcccggcga
     7501 cctcctcgcc atcatgtcgg cgggcgccta cggcgcggtg caggccggaa cctacaacag
     7561 ccgcgcgctg gtcccggaag tgcttgttcg ggcggacgaa tgggcgctgg tgcggcctcg
     7621 ggtcacggct gcggagctga tcgcgctcga ccgcctgccg gcatggcttt gatcttgcat
     7681 tgcgtgcgtc ggcgatcacc gattcgtgcc cgccgggtgc cttgaacctg ccctcgtgtt
     7741 acgctgttgt catgccgaac tttccgccgc ggagatcggg ttgacggaaa tcgtgtcgag
     7801 cacccctgct gccccagggc ctggaggcat tgaacccgtc ggctcagcgc tggcgacggc
     7861 gttgcgccgc gcgcgctgga cgatcttctg ggagcgcctg tggccggcgt tggcgacgct
     7921 ggcgaccgcc gcgggcctgt tcctcgccat ctcctggctc ggagtgtggc tgtggctgcc
     7981 gccggtcggc cgcgcggcgg cggtgctcgc cttcgccgtc atcgcgctcg cggccgccgt
     8041 tcccttcgtc tttgtgcgcg tgcccgccat cgccgacggc ctgcgccggc tcgaccacgc
     8101 cagcgggctg cgccatcgtc cggcgaccgc g
//
LOCUS       DATMQB010000450         8223 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1497787, whole genome shotgun sequence.
ACCESSION   DATMQB010000450 DATMQB010000000
VERSION     DATMQB010000450.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8223)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8223)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8223
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1497787"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..289
                     /locus_tag="VNY79_13045"
     CDS             <1..289
                     /locus_tag="VNY79_13045"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="glutamate--cysteine ligase"
                     /protein_id="HWX73419.1"
                     /translation="AEERQKLRDAVPKEGLTAVVHGRAVREIATDVLKLARAGLARRR
                     QLDAFGRDETRYLEPLEDRLARRTTAAEELLAKFHGPWAGSVEPIFTEQAY"
     gene            complement(364..708)
                     /locus_tag="VNY79_13050"
     CDS             complement(364..708)
                     /locus_tag="VNY79_13050"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73420.1"
                     /translation="MDRSSIVLLAAIALAGGVLAAQAGPCTKQILEVEAQIRSAQALQ
                     PGVAGAPSAPQSVAAQLHRQPTPQSVETALNDANADGIAALNRAKKADAAGNAGECAN
                     ALTETRQLYGLE"
     gene            complement(930..2765)
                     /gene="ftsH"
                     /locus_tag="VNY79_13055"
     CDS             complement(930..2765)
                     /gene="ftsH"
                     /locus_tag="VNY79_13055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009452076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004222 - metalloendopeptidase activity
                     [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HWX73421.1"
                     /translation="MSRQTRFHVGYWIAAVLGLLALQYFYTTAQKVAAIPYSQFEQLL
                     RDHKIAEVGVSDRYIQGRLKEPLNGKSQFVTTRVDPRFADELQKYGVTFTGEVESTLV
                     TDLLSWVVPALLFFGVWMFLSRRVAQGLGGGLMSIGKSKAKIYVEADTGVRFDDVAGV
                     DEAKDELREIVEFLKNPQQYGRLGARMPKGILLVGPPGTGKTLLAKAVAGQAKVPFFS
                     ISSSEFVEMFVGVGAARVRDLFEQARTKAPAIIFIDELDALGRARGFGPYGGHDEKEQ
                     TLNQLLVEMDGFDARSGLVILAATNRPEILDPALLRAGRFDRQVLVDRPDKRGRVAIL
                     QVHLRNTRLAPGVDPEKIAALTPGFTGADLANLVNEATLLATRRGADAVTLEDFTNAV
                     ERMVAGLEKRNRLLNPKEREIVAYHEMGHAVVAVSIPGTDPVHKVSIIPRGVGALGYT
                     IQRPTEDRFLMTREELENKMSVLLGGRAAELTVFGHLSTGAADDLRRVTDVARSMVTR
                     YGMSERLGSVAYERDPRNFLTGPDLPMPHREETYAEETAAAIDQEVRSIVQSAMDRAL
                     AILRDKRDVLERSARKLLEKETLDENDLAALIGSPAGPPIRVAAE"
     gene            complement(2902..3303)
                     /locus_tag="VNY79_13060"
     CDS             complement(2902..3303)
                     /locus_tag="VNY79_13060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011992915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HWX73422.1"
                     /translation="MIFVDTSAVVAILIAEPDAASLATKLEADRERISAGHVILEASI
                     RLAGQLGLTPTVADQLVTRLLREAEIKVVPITEDIARASVEAFERYGKGRAAPANLNV
                     GDCLSYACAKAHGARLLFKGHDLSQTDIVRA"
     gene            complement(3300..3539)
                     /locus_tag="VNY79_13065"
     CDS             complement(3300..3539)
                     /locus_tag="VNY79_13065"
                     /inference="COORDINATES: protein motif:HMM:NF019324.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapB family
                     antitoxin"
                     /protein_id="HWX73423.1"
                     /translation="MALHIRDDRAAKLARRLAERKGISMTEAVIDALESALLRGERPL
                     AERLAEIAADARRLGDPRRRRPMTAQDTDALWGRP"
     gene            3855..4397
                     /locus_tag="VNY79_13070"
     CDS             3855..4397
                     /locus_tag="VNY79_13070"
                     /EC_number="2.3.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018701152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016746 - acyltransferase activity
                     [Evidence IEA];
                     GO_function: GO:0071972 - peptidoglycan L,D-transpeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0018104 - peptidoglycan-protein
                     cross-linking [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase"
                     /protein_id="HWX73424.1"
                     /translation="MSSQFREPPGTIIVDPGNHFLYLVQNNGQAVRYGVGVGGEGFGW
                     SGTATVHTKQEWPDWYPPPEMLERKPEIRQHMVQLPSGLGMHGGPDNPLGARALYLWH
                     GNKDTLYRIHGTNEPWTIGQNVSSGCIRLTNDDVADLYGRAPVGAKVVVLATGTPTAA
                     ASTTASLAPSRRLQAPPLVR"
     gene            complement(4509..6482)
                     /locus_tag="VNY79_13075"
     CDS             complement(4509..6482)
                     /locus_tag="VNY79_13075"
                     /inference="COORDINATES: protein motif:HMM:NF012245.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MHYT domain-containing protein"
                     /protein_id="HWX73425.1"
                     /translation="MFRILDCLTTQHDWRLVAVAGVVCFLASLTAITLFHRARSTKGR
                     ARTVWLAAAGAATGCGIWATHFLAMLAYQPGMPVAYDINLTIVSLLAAGVITAIGLAV
                     AVFTPRRWGAPIGGGIIGGGVAAMHYLGMEALQLPGHIHWDLALVAASIVLGMVLGMA
                     ALMVAVPWQSVRAVWASALLLALAILSHHFTAMGAVEIVPDPTRTITELSLSPGLLAI
                     AVASVTVAILGVSLISALADRRVDDKGRLLGIALDNMDQGVVMFDDAGRLVICNDRYT
                     AMYGLPPRLVKPGVMLADIVRYRAEPGSLQADPARYCADVVEAMAAGRALSMVAETPN
                     GRAISIVNRAIPGSKYWVGTHDDITERRAAERQSTLLGEQQARRAAVDEAITWFRESV
                     EGVLQTVAASVVAMKSTAMALSATSKETTAQTAGAVRTSSEAFGSVDVAATAAGELSK
                     SIAEINRQLASAAEVVRAAATEAQSTNDDIADLAQAAQKIDDVVKLIQSVAGQTNLLA
                     LNATIEAARAGAAGKGFAVVASEVKALAVQTAKATDDIGSQIAAVQTSTQSAVRAIGN
                     ITGRMQEIQQFTGAIATSVEQQNAATGEISDNVAAAASGTKSVVGVLQRVSGAIADMH
                     KAADTVLAASQAVEKAADSLRGSIDGFLHKVAV"
     gene            6782..>8223
                     /locus_tag="VNY79_13080"
     CDS             6782..>8223
                     /locus_tag="VNY79_13080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="radical SAM protein"
                     /protein_id="HWX73426.1"
                     /translation="MAGRTFKVILIKPSHYDADGYVIQWWRSLVPSNSLASMYGLMAE
                     CAAAKSLGDDVDIDIEAYDECNTVIDVKGAIRKIGSAKSGFVGLVGVQSNQFPRTLDI
                     ARELRAAGVTVVIGGFHVSGCLSMLPEMPDDLKAALDLGVILFAGEGEGRVAALLREI
                     DGGKTKPIYNYLSDMPEMAAATLPILPRWAVTRVAGHYTSFDAGRGCPFQCSFCTIIN
                     VQGRKSRYRTPDDVEAIVRANAAQGITRFFVTDDNFARNKNWEPILDRLIELREQHDF
                     NIKLLLQVDTLCHRIPNFIPKAARAGCTAVFIGLENINPESLMGTKKRQNKIWEYRDM
                     LQAWKKAKVMTYAGYILGFPTDTPESIARDIEIIKKELPIDILEFFFLTPLPGSEDHK
                     KLLMRGVPMDPDMNKYDLEHACTAHPLMAQETWERVYADAWQQYYTDEHMEKVMRRAV
                     VAGISRRKLLDSLVLFSGAARIEGVHPLQFG"
BASE COUNT         1407 a         2709 c         2666 g         1441 t
ORIGIN      
        1 cgccgaggaa cgccagaagc ttcgcgatgc agtacccaaa gagggtctca cggcggtcgt
       61 tcacggccgc gcggtgcgcg agatcgcaac cgacgtgctc aagctcgcgc gtgccgggct
      121 cgcacgccgc cgccagctcg atgcgttcgg ccgggacgag acccgctacc tcgagccgct
      181 ggaagatcgt ctcgcgcgcc ggacgacggc ggcggaggag ctgctggcaa aattccacgg
      241 gccgtgggcc ggctcggttg agccgatctt caccgagcag gcttattgac gccgcgccat
      301 cttattccga gacgcagtgc ccgaggcaac cctcccggct tcgcagcagc ttgcggcgac
      361 cgcctactcg agcccgtaga gctgcctcgt ttcggtcagc gcgttcgcgc attcgccggc
      421 gttgcctgcc gcgtcggcct tcttggcgcg attgagcgcc gcgatgccgt cggcattcgc
      481 gtcgttcaag gcggtctcaa ccgattgcgg ggtcggctgg cgatgaagct gagcggcgac
      541 cgattgtgga gcgctcggcg cgcccgccac gccgggctga agcgcttgcg cgctccggat
      601 ttgcgcttcg acctccaaaa tctgcttggt gcacggtcct gcctgcgcgg caaggacgcc
      661 gccggcgagc gctatggccg ccaacaacac gatggatgat cggtccatga tcgaacctcc
      721 gggttagcac gacgtgaaag tgggaaccga ctgtccgtaa agatcatgct ccgctggaga
      781 aatcctgagc gcaatcgatt caagttgaag cgattgcgct tttagtgtcc gccttgaagg
      841 accggagcgc cggtttcccc gcaccgccgg ccgttccaga aagactaccc gtcgcacaag
      901 cgcggaaaag cgcgcggctg gccgcgcggc tactccgctg cgactctgat cggcggcccg
      961 gcgggcgacc cgatcagcgc cgccagatcg ttctcgtcga gcgtctcctt ctcgagtagc
     1021 ttgcgggcgc tgcgctccag cacatcccgc ttgtcgcgca ggatggcgag agcgcgatcc
     1081 atcgccgact gcacgatgct gcgcacttcc tggtcgatcg ccgcagcggt ctcctcggcg
     1141 taggtctctt cccggtgcgg catcggcaga tcgggcccgg tcaagaagtt gcgcgggtcg
     1201 cgctcgtagg cgacgctgcc gagccgttcg gacatgccgt agcgcgtgac catcgaacgt
     1261 gcgacgtcgg tgacgcggcg gagatcgtcg gcggcgccgg tggacaagtg cccgaacacc
     1321 gtcaattcgg cggcgcggcc gccgagcagc accgacattt tgttttccag ttcctcgcgc
     1381 gtcatcagga agcgatcctc ggtgggccgc tggatggtgt agccgagcgc accgacgcct
     1441 cgcggaatga tcgagacctt gtgcaccgga tcggtgccgg ggatcgacac cgcgaccaca
     1501 gcgtggccca tctcgtgata ggcaacgatc tcgcgctcct tcgggttcag caggcgattg
     1561 cgtttttcga ggccggccac catgcgctcg accgcattgg tgaagtcttc gagcgtcacc
     1621 gcgtcggcgc cgcgacgggt ggcgagcagg gtcgcctcgt tgacgagatt ggcaagatcg
     1681 gcgccggtga aaccaggcgt cagcgcggcg atcttctcgg gatcgacgcc gggcgcgagc
     1741 ctggtgttgc ggagatgaac ctgcagaatg gcgacgcgcc cgcgcttgtc cggccggtcc
     1801 accagcacct ggcggtcgaa acggccggcg cgcagcagcg ccgggtcgag tatttccggg
     1861 cgatttgtgg ccgcaaggat gacgaggccg ctgcgcgcgt cgaaaccatc catctcgacc
     1921 agaagctggt tgagcgtctg ctccttctcg tcgtggccgc cataggggcc gaagccgcgg
     1981 gcgcgcccga gcgcgtcgag ctcatcgatg aagatgatcg ccggcgcctt ggtacgcgcc
     2041 tgctcgaaca ggtcgcgcac gcgcgcggcg ccgacgccga cgaacatctc cacgaactcg
     2101 gagctggaga tggagaagaa cggcactttg gcctgcccgg cgacggcctt ggcgagcagt
     2161 gtcttgccgg ttccgggcgg cccgaccagg aggatgcctt tcggcatccg cgcgccgagg
     2221 cggccatact gttgcggatt tttcagaaac tcgacgatct cgcgcagttc gtccttggcc
     2281 tcgtcgaccc cggcgacatc gtcgaagcga acgccggtgt cggcctccac gtagatcttc
     2341 gccttgctct tgccgatcga catcaagccg ccgcccaggc cctgggccac gcgccgcgac
     2401 aggaacatcc acacgccgaa gaacagcaag gccggaacga cccaggaaag gagatcggtg
     2461 accagcgtgc tttccacttc ccccgtaaag gtcacgccgt atttctgcag ctcatcagcg
     2521 aagcgcgggt cgacgcgcgt ggtcacgaac tgggatttgc cattaagcgg ttccttcagc
     2581 cggccctgga tgtaacggtc ggaaacgccg acctcagcga tcttgtggtc gcgcagcagc
     2641 tgctcgaact ggctataggg gatggcggcg accttctgcg ccgtggtgta gaagtattgc
     2701 agcgccagca gcccaagaac cgcggcaatc cagtagccga cgtggaagcg ggtctgcctg
     2761 ctcatgttct tcatcggcat ggccggaaac cttcgcgatc atcccctcca ggcgcaatca
     2821 ccgcttaggt aggagcgcgc cgggcgtttc gataggcggc aatcgtcgtc ctgggcgcga
     2881 cggcggctgg gggccggcgg ctcacgcccg gacgatgtcg gtttgcgaaa gatcgtggcc
     2941 cttgaataga agccgggcgc catgcgcctt ggcgcaggca taggagaggc agtcgcccac
     3001 gttcaggttg gccggcgccg cacgcccctt cccgtatcgc tcgaacgcct cgaccgaagc
     3061 acgcgcgatg tcctcggtga taggtacgac cttgatctcg gcctcccgca gcagccgtgt
     3121 caccagctga tcggcgaccg ttggggtgag gccgagctgc ccggctagcc gtattgaggc
     3181 ctccagaatg acgtggccgg ccgaaatccg ctcgcggtcg gcctcgagct tcgtcgccag
     3241 gctcgccgcg tccggctcgg caatcaagat cgcaacgacg gccgaggtgt cgacgaagat
     3301 cacggtcggc cccagagcgc atcagtgtcc tgcgccgtca tcggccggcg gcggcgtgga
     3361 tcgccgagac gccgcgcgtc ggcggcgatc tcggcgagac gctcggccaa cggtcgttct
     3421 ccgcgcagca acgcgctctc aagggcgtca atgactgcct ccgtcatgga aatccccttc
     3481 cgctccgcca ggcggcgggc aagctttgcg gctcggtcat ctcgaatgtg caaggccatt
     3541 gacgtatatg caatatgtgt agacgtatat cgttactgca tataccaagg acaaagatgc
     3601 cgcaatgatg caaatcggga gtccccacgc cgagaacatc aaattgtctt ggttcggcta
     3661 atactctgat cggcgatttg cgctacactg ctagttgcgt gctgttgtgg ggttggttgg
     3721 gggtgcgggc catgccgagc cgtcgttcgg ttgttgctgg actttgcgct ggtggcttgg
     3781 ttgcgggcct ttgtggctgc gccactgctc cgcaggctgc caggaccgtt gaccccgctt
     3841 atgcccgtac ggtggtgagc tcccaattcc gcgagccgcc gggcaccatc atcgtcgacc
     3901 ccggcaatca cttcctctat cttgtgcaga acaacggcca ggccgttcgc tacggggtcg
     3961 gcgtcggcgg cgaagggttc ggctggtcgg gcacggcgac cgttcacacc aaacaggaat
     4021 ggcccgactg gtacccgccg ccggaaatgc tggagcgaaa gcccgaaatc cgccaacaca
     4081 tggtccagtt gccgagcgga cttggcatgc acggcgggcc cgacaacccc cttggagcgc
     4141 gcgctctcta tctgtggcac gggaacaagg acacgctgta ccgcatccac ggcaccaatg
     4201 agccgtggac gatcggccag aacgtctcct cgggctgcat ccgcctgacc aacgacgacg
     4261 tcgccgacct ctacggccgt gcgccggtcg gcgccaaggt ggtggtgctc gccaccggga
     4321 ccccgaccgc tgccgcatca acgaccgctt ctctcgcgcc atcgcggcgc ctgcaggcgc
     4381 cgcccctcgt gcgttgagtc gcggcgcgat tgcggagggt gcggcgaccc tgggttgacc
     4441 cgccattgcc ggcggttcgt cgcgacttcc tcggatgccg gtgaaccggg ccgccagcgc
     4501 gtccctgact acactgcgac cttgtggagg aagccgtcga tgctgccgcg gaggctgtcg
     4561 gccgctttct cgacggcctg cgacgccgcc agcaccgtat ctgccgcctt gtgcatgtca
     4621 gcgatggcgc cggagacacg ctgcagcacg ccgacgaccg atttcgtgcc cgaggccgcg
     4681 gccgcgacgt tgtcggatat ttcgcccgtc gccgcgttct gctgctcgac cgacgtggct
     4741 atggccccag tgaattgctg aatttcctgc atgcggccgg tgatgttgcc gatggcgcgc
     4801 acggcgctct gcgtcgaggt ttgcaccgcc gcgatctggc tgccgatatc gtcggtcgcc
     4861 tttgccgtct gcaccgcaag cgccttcacc tcggaggcga ccacggcaaa acccttgccg
     4921 gccgcaccgg cgcgcgccgc ctcgatcgtg gcgttgagcg ccaaaagatt ggtctgtccg
     4981 gccacgctct ggatgagctt gaccacgtcg tcgatcttct gcgccgcctg cgccaagtcg
     5041 gcgatgtcgt cgttcgtcga ttgcgcctcg gtcgccgcgg cgcgcaccac ttcggcggcg
     5101 ctcgccaact gacggttgat ctcggcgatc gatttcgaca attcaccggc cgccgtcgcg
     5161 gcgacgtcga cgctgccgaa agcttcgctg gaggtacgca ccgcgccggc ggtctgtgcg
     5221 gtcgtttctt ttgacgtcgc agacagggcc attgcggtcg atttcatcgc gacaacgctg
     5281 gccgctacgg tctgcagaac gccttcgacg ctctcgcgga accaggtaat cgcctcatcg
     5341 acggcggcac ggcgcgcctg ctgctcgcca aggagggtgc tttgccgctc cgcagcccgg
     5401 cgctcggtga tgtcgtcgtg ggtcccgacc cagtatttgc tgccgggtat cgcgcggttg
     5461 acgatcgata tggcgcgccc attcggcgtt tcggcgacca tgctgagcgc cctgccggcg
     5521 gccatggctt ccacgacatc agcgcaataa cgcgccggat cggcctgcag cgagccgggt
     5581 tcggcccggt agcgaacaat gtcggcgagc ataacgccgg gcttcaccag gcgtggaggc
     5641 aggccgtaca tggccgtata ccggtcattg cagatgacca gacggccagc gtcgtcgaac
     5701 atcaccacgc cctggtccat attgtccaag gcgatgccga gcagacggcc tttgtcgtcg
     5761 acccggcggt cggcaagcgc gctgatcaag ctcacgccca atatcgcgac cgtcacgctg
     5821 gcgacggcaa tggcgagcag gcccggtgac agggagagct cggtgatcgt gcgggtggga
     5881 tcgggaacga tttccaccgc ccccatggcc gtgaagtgat gcgaaaggat ggcgagcgcc
     5941 aacaggaggg ccgaagccca taccgcgcgt acgctctgcc aaggcaccgc aaccatgagc
     6001 gccgccatgc ccaggaccat ccccaggaca atggacgcgg cgacgagagc aaggtcccaa
     6061 tggatgtggc cgggcagctg gagcgcttcc atgcccagat agtgcatcgc ggcaacaccg
     6121 ccgccgatga tcccgccgcc gattggcgca ccccagcgtc ttggcgtgaa caccgcgacg
     6181 gccaacccga tagccgtgat gacgccggcg gcgagcagcg acacgatcgt cagattgatg
     6241 tcatatgcga ccggcattcc gggctggtaa gccagcatcg ccagaaagtg tgtcgcccag
     6301 atgccgcagc cggtcgcggc tcccgccgcc gcgagccaga ccgtgcgggc acgccccttg
     6361 gtcgaacgcg cccgatggaa cagggtgatc gctgtcaggc tcgcgaggaa gcagacgacg
     6421 ccggcgaccg caaccaggcg ccagtcatgc tgcgtcgtca ggcagtcgag aatccgaaac
     6481 aaccgtagct ctcgtcaggc tgtgtccaat ctgcctattg gttagtcaac atcgttatac
     6541 gtttccttaa tgaacacagc cgcgctttac gcgtgacgca tctcgcgcgc tccgttgatt
     6601 gcgccgaccg cttcagcgag agggcgattg ctacgcgctg ccctgcgtaa acgcgcgatt
     6661 cgcccgccgc tgccggcggc gccttgcgat cgccgatcgc cgaagttcca tgaattgcgc
     6721 gctttggagc gcatgaaaac atggtatcgt cagcccggtt cggcggcggg gaggccggtt
     6781 cgtggcgggg cggaccttca aggtaatcct gatcaagccg tcgcattacg acgccgacgg
     6841 ctacgtgatc caatggtggc ggtcgctcgt tccctcgaac agcctcgcca gcatgtatgg
     6901 gctgatggcc gaatgtgcgg ctgcgaagtc gctcggtgac gacgtcgata tcgacatcga
     6961 ggcctatgac gagtgcaaca ccgtcatcga cgtcaagggc gccattcgca agatcggcag
     7021 tgccaaatcc ggcttcgtcg gtctcgtcgg cgtgcagtcc aatcaatttc cccgcacgct
     7081 cgatatcgcc cgtgaactcc gcgccgccgg ggttaccgtg gtgatcggcg gctttcacgt
     7141 gagcggctgc ctctcgatgc tgccggagat gccggacgat ctcaaagcgg cgctcgatct
     7201 cggggtcatc ctgttcgccg gcgaaggcga gggccgcgtc gccgcgctgc tgcgcgagat
     7261 cgacggcggc aagaccaagc caatctacaa ctatctgagc gacatgccgg agatggcggc
     7321 ggcgacgctg ccgatcctgc cgcgctgggc ggtgacccgc gtcgccgggc actataccag
     7381 cttcgatgcc ggccgcggct gtccgttcca gtgcagcttc tgcaccatca tcaacgtgca
     7441 ggggcgcaag tcgcgctacc gcacgcccga cgacgtcgag gccatcgtgc gcgccaatgc
     7501 cgcgcaaggc atcacccgct tcttcgtcac cgacgacaat ttcgcgcgca acaagaactg
     7561 ggagccgatc ctcgaccgcc tgatcgagct gcgcgagcag cacgacttca acatcaagct
     7621 cctgttgcag gtggacacgc tctgccaccg cattccgaac ttcatcccga aagcggcgcg
     7681 cgccggctgc actgccgtgt tcatcgggct tgagaacatc aatcccgaat cgctgatggg
     7741 cacgaagaag cggcagaaca agatctggga ataccgcgac atgctgcagg cctggaagaa
     7801 ggccaaggtg atgacctacg ccggctatat cctcggcttc ccgaccgata cgccggaatc
     7861 gatcgcgcgc gacatcgaga tcatcaagaa agagctgccg atcgacattt tggagttctt
     7921 cttcctgacg ccgctgccgg gctcggagga ccataagaag ctgctgatgc gcggggtgcc
     7981 gatggaccct gacatgaaca aatacgacct cgaacatgcc tgcaccgcgc atccgctgat
     8041 ggcgcaggag acctgggagc gggtctatgc ggacgcgtgg cagcagtact acaccgacga
     8101 gcacatggaa aaggtgatgc gccgcgccgt cgtcgccggc atcagtcgca ggaagctcct
     8161 cgactcgctg gtgttgttct ccggcgccgc gcgcatcgag ggcgtgcatc cgctgcaatt
     8221 cgg
//
LOCUS       DATMQB010000451        20359 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4249146, whole genome shotgun sequence.
ACCESSION   DATMQB010000451 DATMQB010000000
VERSION     DATMQB010000451.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 20359)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20359)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20359
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4249146"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..510)
                     /locus_tag="VNY79_13085"
     CDS             complement(<1..510)
                     /locus_tag="VNY79_13085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008836973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73427.1"
                     /translation="MASALELRRVSAGYGQTMVLEDIDLKLVPGECISVIGRNGVGKT
                     TLLATVMGHTTLHAGEVVLDGRRLNGMPSFRRALTGIGFVPQEREIFPSLSVRENLEV
                     AARPGHWTRERVFALFPRLKERLDNMGNQLSGGEQQMLSIARALLTNPTVLLMDEPTE
                     GLAPVLVETL"
     gene            complement(503..1258)
                     /locus_tag="VNY79_13090"
     CDS             complement(503..1258)
                     /locus_tag="VNY79_13090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018480827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73428.1"
                     /translation="MSAIRLETQALSRHFGALTAVSDIDFRLDAGARHALIGPNGAGK
                     TTFVNLLTGVLPPTRGRVLLAGRDITGRTQAERVKLGIARTFQINRLFRGLSVLENVC
                     ISVAERIGAASSMFYPAGRRTDVIEEAMHLLETLKLADHARRRVSELPYGRQRLIELA
                     IAIGLKPQVLLLDEPAAGVPSAESHIILDAIERLPEDIAVLIIEHDMDVVFRFARRVT
                     VMVSGAVFAEGTPKEIEANREVREVYLGQAVNG"
     gene            complement(1255..2295)
                     /locus_tag="VNY79_13095"
     CDS             complement(1255..2295)
                     /locus_tag="VNY79_13095"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX73429.1"
                     /translation="MSVAAAPAGPAAGAGPLDHPAARVLIRRHRLRWWEALPWIVALG
                     VYFIFPDYLSFGAELLIAIPFALSLDLALGYAGIITLGHAAFFGTGAYTVGLLAFHGL
                     WSEPITSLMLAGLAAAVIGLASGLVLLRTTGLTLLMLTICTMALLGEAANMAHDYTGG
                     FDGLPSLPIAPVFGVFEFNPLYANTQYLYALAVLFVCFAFVRTLVYSPFGQSLTGIRE
                     NALRMHAVGTPVRRRLVICYTISAAIAGIAGALWAQTNAYVNLSALDLDRAATVLIVL
                     ILGGYGRLYGAFIGAVVYLALEHFLAQIYPSAWQLGLGLLLVAIALFARNGILGLGAT
                     LTQRYAVWRAAS"
     gene            complement(2292..3167)
                     /locus_tag="VNY79_13100"
     CDS             complement(2292..3167)
                     /locus_tag="VNY79_13100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011665598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX73430.1"
                     /translation="MDFAGNFISILLGGLSAGTVLFIVSVGLSVTMGLMGFVNLAHGA
                     FAMFGGYVIVLAMNRAHIGFGPALALGFFATAALSAVLERLFYRRLYRAGELDQVLFT
                     IGLIFIFIAGITITVGPESQPFELPPALGGQLNLGFLRYRTYSIFLIGVGLLIVLGIW
                     LAFERTRIGAQIRATVDNRRMAESLGINVDRLFTITFAFGSGMAALGGGLGAEFLGLD
                     PQYALKYLVYFLIVVSVGGLGSVVGVYYASLLLGVLDFVLKLYLPKGGTIFIYALTIL
                     LLLWRPRGLFGRKET"
     gene            complement(3318..4523)
                     /locus_tag="VNY79_13105"
     CDS             complement(3318..4523)
                     /locus_tag="VNY79_13105"
                     /inference="COORDINATES: protein motif:HMM:NF024850.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HWX73431.1"
                     /translation="MPKRMIAAIAALAFSAGAALAQEIKVGVVLPFTGIGAEFAQQMD
                     RGMELYLKANADQVKPYTIKLIKRDSKAPNGAEAKVAVQELLTQDKVDALAGWVYSPD
                     AIASAPVVAAGKKLAVIMNAGTAFITNLAPEYVRTSFTMWHSGYAMGVATAKTLHAKT
                     AVVAYTDFPPGKDSLEAFKQGFEANGGKVIDAIPAGGPGTVPDFTPFFQRAKDEKPDV
                     LYVFVPAGDHASAAAKTYGALGMREAGIKLIGPGDITQDIKLQGMGDTAVGLVTMHHY
                     NADLDNPENKRFVAAWKKEYGADSTPDFMAVGAYDGMAAIVQAVQATKGKMDGEEAVK
                     SLLGWKFNSPQGPIMIDPATRDIVMNEYLDEVVKGSDGKLHQKVIGQIDQVKDQCKEL
                     AFGPCAPKK"
     gene            complement(4704..6965)
                     /locus_tag="VNY79_13110"
     CDS             complement(4704..6965)
                     /locus_tag="VNY79_13110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HWX73432.1"
                     /translation="MIRRLHVLPLLLASAAIALNSAGALAKVHKHGSADADGKRSTHS
                     SAGTKAKPSAGAHAKHLKHGGTEKKKSAETDGKHSKHDHASRSKSDDHCKAVVPISDA
                     AASPVIEALELIPPDEIETVKQALDLVRKHKPTEATEVEKTIHDPVAKKLVEWVILRS
                     DDMGSEFGRYAAFIRDNPGWPGITFFRRRAEVALWPDRRDAATVRRFLAGNPASARGR
                     LALARVLIADGDREGAERLIRETWWSDELSERVESEVLEAFRDFLTASDHRRRMDRRI
                     AAKDFSGAMRAAHRLGGGETAVVKACTAVAEKSSKARKLLDAVDGEARSDLGYTLCRI
                     HWLLGNKSVAEAAHVVLASPREGMEFQDTDEWWRERRILARKLLDQGDAKTAYEVVRD
                     GALPANINYRAEFHFMAGWIALRFLGDPAAAIEHFAHVGDDSTNPIVQARADYWRGRA
                     AEAAGQMQNARAYYEAASRHSTAYYGQLARARLGLGEIALRAPPELDAAVWASEVVRA
                     AAILYAAGERELVISFATDLAERSSDVRALMGLAELAARHEDARTTLSIGRTALARGF
                     ALDLYAFPNFGVPRYSPIGPAVDASITYSVVRTESSFDPQDKSPANAVGLMQVTPESA
                     RDTAGRFHATYDWKRMVCDPIYNVQMGAGELAGLLRDYRGSYMMTFAGYNAGRGRVAE
                     WVKAHGDPRDPKVDPVDWVERIPIAETRNYVQRVMENLQVYRVRFRTGQPAAAESDVS
                     HAAAAGEMGGPPP"
     gene            complement(7267..7803)
                     /locus_tag="VNY79_13115"
     CDS             complement(7267..7803)
                     /locus_tag="VNY79_13115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012383431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HWX73433.1"
                     /translation="MQAILASDPARCGVLAMVRSLGLPDCWVGAGFIRNAVWDYLHDR
                     PPSRHTGDVDVVWFCRERARPAEDKEVEAALRALDPSVDWSVKNQAWMHLRNGDAPYA
                     AAVDAIGHWPETATAVAARQTPAGSCEIAAPFGLGDLFDLVLRPTPRFAGEKRAVYLD
                     RVQSKGWLAIWPRLRVAP"
     gene            complement(7888..8328)
                     /locus_tag="VNY79_13120"
     CDS             complement(7888..8328)
                     /locus_tag="VNY79_13120"
                     /inference="COORDINATES: protein motif:HMM:NF018748.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HWX73434.1"
                     /translation="MSIQALRQGASRNPRTVEEARAFVQYVESLFMPWNIDALVDGFT
                     EDCVVRFGTVPEFRGRDALRAFFAARSAKQKGYRLKKQFRTLVNDTLTNVWAGEWEDA
                     DSGVRMRGFGVEVWVMRGGRIALWEAAFNTGRADEVSSVADVLR"
     gene            complement(8405..9547)
                     /locus_tag="VNY79_13125"
     CDS             complement(8405..9547)
                     /locus_tag="VNY79_13125"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF012517.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HWX73435.1"
                     /translation="MIKKFHVLYVGQIELDNVGINGTPANERRYSDRQLHEAFFTARD
                     VAQLMDELGFDVLWTAEHHFQREGYEVFPNLIQLGLWLATQTKRLKFGCAFNILPMWH
                     PLRMAEDYAMADVVTDGRVILGVGRGYHTREVETFGAPLLDAEKNRELFEEQLRLLLT
                     CFNEQSFHFKGKYFECPPPVDYRGYPLKDVTLVPRPKHLPVEIWMPIASGKTIELMAQ
                     YGLKAMVTLNGEKILDDVVRAYHAACLKHGRNKQLGEDVIWGAGVYLADSHDEAVRRI
                     EPAHDERYKWFAPFGFVRYADEQGRTWGSPGAPARTPHLKDGVAQKAWFCGPPAEVID
                     GIKSIEAKYPGLENFMIHWAEGLSPKEFKEQLRWFAKDVMPAFKKT"
     gene            complement(9661..11406)
                     /locus_tag="VNY79_13130"
     CDS             complement(9661..11406)
                     /locus_tag="VNY79_13130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-binding protein"
                     /protein_id="HWX73436.1"
                     /translation="MNEAVTATQDLNADPQTCAAWVARFLKTRGIDRVFGLQGGHIQP
                     LWDHVAQQGIRIIDVRDEGAAVHMAHAHAELAGGFGVALVTAGPGVTNTVTAVANAFL
                     ARAPVLLIGGCPPRPQANMGPLQGIPHVDILRPVTRTARTLNLAEQVVRELDEAVARA
                     TGDAGEPGPVYAEIPIDVLRARVPPQLVLDEWMQAKPPRRLPPEAAAIATAVEVFWAA
                     KRPLVVTGRGARGAASPLLRLLEATGALYLDTQESRGLVPADHPSVAAAVRGAAMSEA
                     DVVLLIGRRLDYQLGYGSPAVFPQARFIRLADNAGELIDNRRGQVELLASPDLALAAM
                     VEIAGNRAPAADAAWLERMRRRHRDRVAAAAAAGGRPATGADGKIHPRAIFDAIADLA
                     DPDYVAVADGGDLLSFARTGLSASTYMDAGAFGCLGVGVPFAIAAALAMPDRQVISVN
                     GDGAFGINAMEIDTAVRHGAKCVFIVSNNAAWNIERIDQEQNYGGRVVGTTLRHSDYA
                     AMARALGLYGERVEAPDGLRPALQRALRNAPALVDVVTSQSAMSSDAQKGLSFVPDFQ
                     ALTAWDEAERKRRQS"
     gene            complement(11414..12130)
                     /locus_tag="VNY79_13135"
     CDS             complement(11414..12130)
                     /locus_tag="VNY79_13135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73437.1"
                     /translation="MSDALLEVEALATGYGEVQVLWGLSLAAARGRLTTLVGANGAGK
                     TTMLRAVVGTLTPWSGRVLFKGEDVTRLPAHAKAARGLVLVPEGRQLFSTMTVDENLE
                     MGAFTRRGADSYADRLERVFTLFPRLKERRRQKAGTFSGGEQQMLAIARGLMTDPEIL
                     IIDELSLGLAPLFVYQLFAALKALKDTGLTVLLVEQNVHLAFAVSDYAYVIAEGRLFS
                     EGLPATLAAMPEIRRAYLGL"
     gene            complement(12127..12885)
                     /locus_tag="VNY79_13140"
     CDS             complement(12127..12885)
                     /locus_tag="VNY79_13140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010686693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73438.1"
                     /translation="MTALLEIDGLSKSFGGLRAVNQLSFTVREREILGLIGPNGAGKS
                     TVFNLINGVFAPDQGWVKFAGADLTGKPPYRVARHGLARTHQIVQPLTDLTVLENCTV
                     GACFGRENLPLARARAVAREVAVFVGLEDRLATPAAQLTIAGKKRLELARALAAQPLL
                     LLLDEVLAGLNPTEIERMLTVIRSIRQRGVAILIIEHLMQAIMGLSDRIVVLNSGQKL
                     AEGTPAEIANNAAVIEAYLGDPALAEKLHGGAAA"
     gene            complement(12882..13892)
                     /locus_tag="VNY79_13145"
     CDS             complement(12882..13892)
                     /locus_tag="VNY79_13145"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX73439.1"
                     /translation="MKSEKTGAIDRDRASPMLYRPFFWIIALAVAAFAVVPLIGDNVQ
                     LRESLLLAAVYITLASNLNIMLGYAGYINFGSIVFFGLGGYISVYLVSAHAWPLAAAE
                     LAAGVAVSLLALIFGLGVLRLRGAFFALATIGINQGVQAFVSNFEPWGGSAGLYLSTQ
                     IFEPLGGAMRSLWVIYFLLVAVMGLSLYLSYAIKTSKFGLGLIAIGQNEDAAVVLGVP
                     APLYKALAYSLSAFLPALAGGLYFFKSAFIQPSDAFDLSLSTEAMVIVMLGGRGTVTG
                     AAVGAYLYEELRGWLLTSETFSNFQLVVSGVLLLIIVLFVPGGLMGWIYGRWPRMKQV
                     LE"
     gene            complement(13889..14749)
                     /locus_tag="VNY79_13150"
     CDS             complement(13889..14749)
                     /locus_tag="VNY79_13150"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX73440.1"
                     /translation="MLGIIASIVDGVLIGSVYGLAAMGLTLIWGVMNVVNLTHGAAIV
                     AGMFALYLLTSALDLPPYAVLPLILLGGFLVGVGLYWIAVHRMIGQPPLMFLLSTFSV
                     NLVVIGLATAVWGTGLFNVPVSLPGVTWQRYTFPGTHLLAAALTAVIAGLLYLFLYHT
                     RLGKAVRAVADNREAAELSGIPTTRVLSLAFGLGVALAAAAGMLIATMFPFTVLAGDA
                     YQLKSFVVTALGGLGNPAGALVGGVALGLVEGFAAQFMPVSWTLVIEFVLFVLVLIIF
                     PRGVFAFTRS"
     gene            complement(14847..16049)
                     /locus_tag="VNY79_13155"
     CDS             complement(14847..16049)
                     /locus_tag="VNY79_13155"
                     /inference="COORDINATES: protein motif:HMM:NF024825.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HWX73441.1"
                     /translation="MSALRLLAAAAMFFAAPAFAEEDTLTIGMTLSQTGPLNVDSVAQ
                     QRGAELWRDQVNEAGGLKVGDKRYKLRYVTYDDQSQGGRVQQLYTRLIVQDKAQFLFS
                     PYSSGLCATAAVITEQYGRLMLITGGAEPKTYTLGNKYLVQVITSADHYLSGAIGALQ
                     SKSAHAKVAFVYSDDPFSKAVTVAAREQAKESGFSIVLDESYAPATTDFSPIINKIVT
                     ASADALLGGGHYTDGATLARQIYDQKANLKYVALLVAPDSPEFASLGEAAFGIAVPSQ
                     WEIQATYKPEFGPTGAEFVKAFQDKFKIAPDYHAASGYQGGIILQHAIEQAGSIDADK
                     VVAALNAMDVTTFFGHYKIATDAGHHGLQTAHEMVLAQWQKKNGQLEREVVWPKSAQT
                     ADILYPLH"
     gene            16287..17741
                     /locus_tag="VNY79_13160"
     CDS             16287..17741
                     /locus_tag="VNY79_13160"
                     /EC_number="1.2.1.68"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006725671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050269 - coniferyl-aldehyde dehydrogenase
                     activity [Evidence IEA];
                     GO_process: GO:0006081 - cellular aldehyde metabolic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="coniferyl aldehyde dehydrogenase"
                     /protein_id="HWX73442.1"
                     /translation="MQEALQQQFVERAAPAEPHAKLRVILETQRAAFLRAGAPSLEER
                     RADLARLGGAIRHESGRIADVISADFGHRSRHETELAEIFPVLSAIRHARSHLRRWMR
                     PKRVPVGLELRPARAAILHQPVGVVGIIGPWNYPFHLAIMPLIAALAAGNRVMVKPSE
                     LAPRTAEFLAEFLAGLFPFEKVATIVGGADAGAAFSRLPFDHLFYTGSTAVGRLVMQA
                     AAENLTPVTLELGGKSPCILGEDAHLPAAVESIVYGKLLNAGQTCIAPDYVLLPSRQL
                     DAFVELAVHAVQKFYPTLKDNADYTSIINERHYARVAQYVAEARASGARVTEINPAGE
                     TLAPDARKLPPTLVIDPGEELAVMREEIFGPVLPIKTYSWLDEAIDYVNRRPRPLALY
                     YFGTDATKRDEVLRKTISGGAAVNTTLFHIAAEGLPFGGIGASGIGAYHGEFGFQTFS
                     HRKGVLLQSRLNASRFLHPPFGRIADLMLRFLNR"
     gene            complement(17903..18790)
                     /locus_tag="VNY79_13165"
     CDS             complement(17903..18790)
                     /locus_tag="VNY79_13165"
                     /EC_number="1.14.11.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016848344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051213 - dioxygenase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="TauD/TfdA family dioxygenase"
                     /protein_id="HWX73443.1"
                     /translation="MDIVPLGPGFGAELRGVTLADVAADDAAYAAVRAAFEEHSVLVF
                     RGQDVSDDVQIAFSRRFGSLEITKVGSRGAGTNLVILTTMDENGKVVPPDHRFALRNK
                     ANQLWHTDSTFKEVPALASVLSARIIPAEGGETEYVSTRLAFARLEAALRQRLENSFA
                     WHDYAHSRSKIAPGLATPVERTALPPQCWRLVWKNPANGRSALYIASHAYGIEGMDEA
                     AAQKLLDELTDAATAPGQSYVHTWRNGDVVMWDNRATMHRGRPWPAHEARFMVRTTIS
                     AADVDGLQSVQPPSRQAAE"
     gene            19205..19990
                     /locus_tag="VNY79_13170"
     CDS             19205..19990
                     /locus_tag="VNY79_13170"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73444.1"
                     /translation="MEPKAILLAASLRLYFPENVELIAAHPALTGPLQTETLKALAAL
                     DVGKIPVRNPLRPDYPIGHKFAALMLLDGPDCGIFIDTDVLVMTAPQSLPDSLAAVPA
                     SFNHHAKPVWEHVYNRFGLTLPLASPPTLVSRDRTAPYFNSGVIVVPGPVAKRLAASW
                     IDTAMQIDGDPQVPDRSKRPNLSQLALPVAAARVGLGIEVLDPRWNFPAWSWRIAQEG
                     VPILFHYQTMERLREEEPSLRVAMQAAEIHPSVRDALAAFSYI"
BASE COUNT         3550 a         6711 c         6761 g         3337 t
ORIGIN      
        1 cagcgtctcg accagaaccg gcgcaagccc ttcggtcggc tcgtccatca gcagcaccgt
       61 gggattggtc agcagcgcgc gcgcgatcga cagcatctgc tgctcgccgc ccgagagctg
      121 gttgcccatg ttgtcgagcc gctccttgag ccgcgggaac aacgcgaaga cgcgctcgcg
      181 cgtccaatgg ccgggccgcg cggcgacctc gagattctcc cgcaccgaca gcgagggaaa
      241 gatctcgcgc tcctgtggca cgaagccaat gccggtcagc gcgcggcgaa agctaggcat
      301 gccgttgagg cggcggccgt cgagcacgac ctcgccggca tgcaaggtgg tgtggcccat
      361 gacggtcgcc aggagagtcg tctttcccac gccgttgcgg ccgatcacgc tgatgcactc
      421 gccggggacg agtttcagat cgatgtcttc gagcaccatg gtctggccgt agccggccga
      481 gacgcggcgc aattcgagcg cgctagccat tgacggcctg cccgagatag acctcgcgca
      541 cctcgcggtt ggcctcgatc tcctttggcg ttccctcggc gaacaccgcg ccgctcacca
      601 tcacggtgac gcgcctggcg aagcggaaca ccacgtccat gtcatgctcg atgatgagca
      661 cggcgatgtc ctcagggagc cgttcgatgg cgtcgaggat gatgtggctt tcggcgctcg
      721 gcaccccggc ggctggctca tcgagcaaca gcacctgcgg cttaagcccg atcgctatcg
      781 caagctcgat cagccgctgg cggccgtagg gcagctcgga gacgcggcgg cgcgcatggt
      841 cggcaagctt caacgtctcc agaagatgca tcgcctcctc gatcacgtcg gtccggcggc
      901 cggcgggata gaacatcgac gaggcggcgc cgatgcgctc ggcaacggag atgcagacat
      961 tctccagcac cgagaggccg cggaacagcc ggttgatctg gaacgtgcgc gcgatgccga
     1021 gcttgacccg ctcggcttgc gttcggccgg tgatgtcgcg gccggcgaga agcacgcgcc
     1081 cgcgcgtcgg cggcaacacg ccggtcagca ggttgacgaa cgtggtcttg ccggcgccgt
     1141 tggggccgat cagcgcatgg cgcgccccgg catcgagcct gaagtcgatg tcgctcacgg
     1201 cggtgagcgc gccgaaatgg cggctcagcg cctgcgtctc gagccgtatc gcgctcatga
     1261 cgcggcgcgc cagacggcgt agcgctgcgt gagcgtcgcg ccgaggccga ggatgccgtt
     1321 gcgcgcgaac aacgcgatcg caaccagcag cagcccgagg ccgagctgcc atgcgcttgg
     1381 atagatctgc gccagaaaat gctccagcgc caggtagaca acggcgccga tgaacgcgcc
     1441 gtagagccgc ccatagccgc cgaggatgag gacgatgagc acggtcgcgg cgcgatcgag
     1501 atcgagcgcg ctcaggttga cgtaggcgtt ggtctgcgcc cagagggcgc cggcgatgcc
     1561 cgcgatcgcc gccgagatgg tgtagcagat cacgagccgg cgccgcaccg gcgtgccgac
     1621 cgcatgcatg cgcagcgcat tttcgcggat gccggtgagg ctctggccga acggcgaata
     1681 gaccaaggtg cgcacgaacg cgaagcagac gaagagcaca gccagcgcgt agagatattg
     1741 cgtgttggcg tagagcggat tgaactcgaa gacgccgaat accggggcaa tcggaaggct
     1801 cggcaacccg tcgaagccgc cggtataatc gtgcgccatg ttggcggcct cgccgagcag
     1861 cgccatggtg cagatcgtga gcatgagcag ggtgaggccg gtggtgcgca gcaggacgag
     1921 gcccgaggcg aggccgatca cggctgccgc caggccggcg agcatgaggc tcgtgatcgg
     1981 ctcgctccac aggccgtgaa acgccagcag tccgaccgta taggcgccgg tgccgaagaa
     2041 cgccgcatgg ccgagcgtga tgatgccggc atagccaagc gcgaggtcga gcgagagcgc
     2101 gaacgggatc gcgatcagaa gctcggcgcc gaagctcaga tagtcgggaa agatgaaata
     2161 gacgccgagc gcgacgatcc agggcagcgc ctcccaccag cgcaggcgat gccgccggat
     2221 gaggacgcgc gccgccggat ggtcgagcgg cccggcgccg gcggccggcc cggccggagc
     2281 ggccgcgacg ctcacgtctc tttccttccg aacaatccgc gcggacgcca cagcaggaga
     2341 agaatggtga gcgcgtagat gaagatggtg ccccccttgg gcaggtaaag cttgagcacg
     2401 aaatcgagta cgccgagcag cagcgaggcg taataaacgc cgaccacgct gccgaggccg
     2461 ccgaccgaca ccacgatcag aaaatacacc agatatttga gcgcgtattg cggatcgagg
     2521 ccgagaaatt ccgcgccgag cccgccgccg agcgccgcca tgccgctgcc gaacgcgaag
     2581 gtgatggtga acagccggtc gacgttgatg ccaagcgatt ccgccatgcg gcggttgtcg
     2641 acggtggcgc gaatctgggc gccgatccgc gtgcgctcga aggcgagcca gatcccgagc
     2701 acgatcagga ggccgacccc gatcaaaaag atgctgtagg tgcgatagcg caggaagccg
     2761 aggttgagct ggccgccgag cgccggcggt agttcgaacg gctggctttc cggcccgacc
     2821 gttatcgtga tcccggcgat gaaaatgaaa atgaggccga tggtgaaaag cacctggtca
     2881 agctcgccgg cgcggtaaag ccggcgatag aacaaccgct cgagcacagc gctgagcgcg
     2941 gcggtggcga agaaacccaa cgccagagcc gggccgaagc cgatatgcgc gcggttcatc
     3001 gccagcacga tgacgtagcc gccgaacatg gcgaaagcgc cgtgggcgag gttgacgaac
     3061 cccatcagcc ccatcgtcac cgaaagcccg acggagacga tgaacagcac cgtgccggcg
     3121 gacaggccgc ccaacaggat gctgatgaaa ttaccggcaa aatccacggg caatcccctc
     3181 accaccgggc ggggcgaacg gcggacggcg aacagcgaat accggcaaca ttctattcgc
     3241 tagtcgcggt ttcgccattc gccgccatgg cagtaggagg cgaggcccga cacggcaact
     3301 gactgcgaat gcgccgatca cttcttcggc gcgcacgggc cgaacgcaag ctccttgcac
     3361 tggtccttca cctgatcaat ctgtccgatc accttctggt ggagcttgcc gtcggagccc
     3421 ttcacgacct cgtccagata ttcgttcatg acgatgtcgc gggtcgccgg gtcgatcatg
     3481 atcggacctt gcgggctgtt gaacttccag ccgagcagcg acttcaccgc ctcttcgccg
     3541 tccatcttgc ccttggtggc ctgcacggct tggacgatag cggccatgcc gtcgtaggcg
     3601 ccgaccgcca tgaaatccgg cgtcgaatcg gcgccgtatt ccttcttcca ggcggcgacg
     3661 aagcgcttgt tctccggatt gtcgagatcg gcgttgtagt ggtgcatggt gacgaggccg
     3721 accgcggtgt cacccatgcc ctgcagcttg atgtcctggg tgatgtcgcc gggtccgatc
     3781 agcttgatgc ccgcctcgcg catgccgagc gcgccgtagg tcttggccgc ggcgctggca
     3841 tgatcgccgg ccggcacgaa cacgtacagc acatccggct tctcgtcctt ggcgcgctgg
     3901 aagaacggcg tgaagtcggg aacggtgccg ggtcctccgg ccggaatggc gtcgatcacc
     3961 ttgccgccat tggcctcaaa gccctgtttg aacgcctcca agctgtcctt gccgggcggg
     4021 aagtcggtgt aggcgacgac cgccgttttc gcatgcagcg tcttggcggt cgccacgccc
     4081 atcgcatagc cggaatgcca catggtgaac gaggtgcgca cgtattccgg cgccagattg
     4141 gtgatgaagg cggtgccggc gttcatgatc accgcgagct tcttgccggc ggcaacgacc
     4201 ggcgccgacg cgatcgcatc gggcgaatag acccagccgg caagggcatc gaccttgtcc
     4261 tgggtgagca attcctggac cgcgaccttg gcttccgcgc cgttcggagc cttcgaatcg
     4321 cgcttgatga gcttgatggt gtagggcttc acctgatcgg cattggcttt cagataaagc
     4381 tccatgccgc gatccatctg ctgcgcaaat tcggcgccga tgccggtaaa gggcaggacg
     4441 acgcccacct ttatctcctg cgccagagcc gcgccggccg aaaaggcaag tgcggcgatg
     4501 gccgcaatca ttcgcttggg catgagcaac cctcccggtt tctttgattc cgttgatttc
     4561 aatgctggac ttgttggacg ctgatactag ggggaagggc ggaaatggca agcaaaaggc
     4621 agccgcgcgg cactgcgcgc cttcgtcgcg ccaccgcgaa tccgagcaaa atcatgcagc
     4681 gggcggcgcc cgtccctggc cggtcagggc ggcgggccgc ccatttcgcc ggcagcggcg
     4741 gcgtggctga cgtccgactc tgctgcggcc ggctgtccgg tgcggaagcg cacgcgatag
     4801 acctgaaggt tttccatcac ccgctgcacg tagttgcgcg tttccgcgat cggaatgcgt
     4861 tcgacccaat ccacggggtc gaccttggga tcgcgcgggt cgccgtgcgc cttcacccat
     4921 tcggcgacgc ggccgcgccc cgcgttgtag ccggcaaagg tcatcatgta ggagccgcgg
     4981 taatcgcgca gcaacccggc gagttcgccg gctcccattt gcacattgta gatcggatcg
     5041 cacaccatgc gcttccaatc gtaggtcgcg tggaacctgc ccgcggtatc gcgggcgctc
     5101 tccggggtga cctgcatcag gccgacggcg ttcgccggcg acttgtcctg cggatcgaag
     5161 gagctctcgg tgcgcacgac cgaataggtg atgctcgcat cgactgcggg accgatcggg
     5221 ctgtagcgcg ggacgccgaa attggggaag gcgtagaggt ccaaggcaaa tccgcgggcg
     5281 agcgccgtcc tgccgatact caaggtggta cgggcgtctt cgtggcgcgc ggcgagctcg
     5341 gcgagcccca tcaaggcgcg aacatcgctg cttcgttcgg caagatccgt ggcaaacgag
     5401 atcacgagtt cacgttcgcc ggcggcgtag aggatggccg cggcgcgtac cacctcggac
     5461 gcccagaccg cggcatcgag ctccggcggg gcgcgcaacg cgatctcgcc gagcccgagc
     5521 ctggcgcgcg ccagctgacc gtaataggcg gtcgaatgac gggaagcggc ctcgtaatag
     5581 gcccgcgcgt tctgcatttg accggccgcc tcggcggcac ggccgcgcca gtagtccgcg
     5641 cgcgcctgca cgatcggatt ggtggagtca tcgccgacgt gggcgaaatg ctcgatcgcc
     5701 gccgccggat cgccgagaaa gcgcagcgcg atccagcccg ccatgaagtg gaattcggcg
     5761 cgatagttga tgttcgccgg cagcgcgccg tcgcgcacca cttcataggc cgtcttggcg
     5821 tcgccttgat cgaggagctt gcgcgcgagg atccggcgct cgcgccacca ttcgtcggtg
     5881 tcctggaatt ccatgccctc gcgcgggctg gcgagcacca cgtgggccgc ttcggcgacg
     5941 ctcttgttgc ccagaagcca gtgaatgcgg cagagcgtgt acccgaggtc gctgcgcgcc
     6001 tcgccgtcga cggcgtcgag cagcttgcgg gctttgctgg atttctcggc cacggcggtg
     6061 caggccttga cgaccgcggt ctcgccgccg cccagccgat gggcggcacg catcgcgccg
     6121 ctgaaatcct tggcggcgat gcgccgatcc atccgccggc ggtgatcgct cgctgtcaga
     6181 aaatcgcgga aagcctcgag aacctcggac tcgactcgct ccgacagctc gtcgctccac
     6241 cacgtttcgc ggatcaggcg ttcggcgccc tcgcggtcgc cgtcggcaat gagcacgcgg
     6301 gcgagcgcca agcgccccct ggcgctcgcc ggattcccgg ccagaaaccg gcgcacggtg
     6361 gcagcgtcgc gccggtcggg ccatagcgca acttccgcgc ggcggcggaa gaaggtgatg
     6421 cccggccagc ccggattgtc gcgaatgaag gccgcatagc ggccgaattc cgaacccatg
     6481 tcgtcggagc gcaggatcac ccattcgaca agcttctttg ccaccgggtc gtggatcgtt
     6541 ttttccacct cggtggcctc ggtcggcttg tgcttgcgca cgagatcgag cgcctgcttg
     6601 accgtctcga tctcgtccgg cggtatcagc tccagcgctt cgataacggg cgaggcggcg
     6661 gcgtcgctga tcggcacgac ggccttgcaa tgatcgtccg acttcgaccg cgaagcgtgg
     6721 tcgtgcttgg aatgcttccc gtccgtttcc gccgactttt tcttctcggt accgccgtgt
     6781 tttagatgtt tggcgtgggc gccggccgat ggcttggcct tcgtgcccgc cgaactgtgg
     6841 gttgagcgct tgccgtcggc atcagccgaa ccgtgcttgt gcaccttggc gagcgcgccc
     6901 gccgagttga gggcgatcgc cgcagaggcg agcagcagcg ggagcacgtg taagcgtcgg
     6961 atcatcggcc aacgtacccc gtttcacctc accggccttc gccgactccg cctcgcggca
     7021 gtgcctccat gcgggagcga aggtttagcc gtttgcgtcc gtgcaatgct tccgtgcaat
     7081 gctattgtgg ttattttggc gggcgatgtg atgccacagt gaattttggc gactgttgca
     7141 atcgggcgac aaagtgattc gcagcttagt tccaaacgcg agcgcggaac agggttaatc
     7201 ttgtccaacc gggccgcaac gttgaggtct gagaggcccg atgccgaacg ttgcagggcc
     7261 tgaacatcac ggcgcgaccc gcagccgcgg ccagatcgcc agccaccctt tggactgtac
     7321 gcgatcgagg tacaccgcgc gcttctcgcc cgcaaagcgc ggggtcggcc gcaggaccag
     7381 atcgaacaga tcgccgaggc caaacggcgc cgcgatttcg caggaacctg caggcgtctg
     7441 ccttgccgcg acggcagtcg cggtttccgg ccaatggcct atcgcatcaa cggccgccgc
     7501 gtagggcgcg tcgccgttgc gcaaatgcat ccacgcctgg tttttcaccg accagtcgac
     7561 cgacggatcc agggctcgca gcgcggcctc cacctccttg tcttccgccg gccgggcgcg
     7621 ttcgcggcag aaccagacga cgtcgacgtc cccggtgtgg cgggacggcg ggcggtcatg
     7681 caggtagtcc cacaccgcat tcctgatgaa gcccgcgccg acccagcaat ccggcagccc
     7741 gagcgagcgg accatggcga ggacgccgca ccttgccgga tcgctcgcga ggatcgcctg
     7801 caaggcagac gcgtgtttca tgcggaagcc tcacgcaggc tgtgccaccg cggtcggcac
     7861 caagcttcgc tgattcccgg cactaattca gcgcagaacg tcggcgacgc tgctcacctc
     7921 gtcggcacgc ccggtgttga acgccgcttc ccagagcgcg atcctgcccc cgcgcatgac
     7981 ccagacctcg acaccgaagc cgcgcattcg caccccgctg tcggcgtcct cccattcccc
     8041 ggcccataca ttggtcagcg tatcgttcac cagcgtccgg aactgcttct tcagccggta
     8101 gcctttctgc ttggcgctgc gcgccgcgaa gaacgcacgc agcgcgtcac gccctcgaaa
     8161 ctccggcacc gtgccgaaac gcaccacgca gtcttcagtg aagccgtcga ccagcgcatc
     8221 gatgttccac ggcatgaaca gcgactcgac gtactgcacg aatgcccgcg cctcttcgac
     8281 cgtgcgcggg ttgcgactgg cgccctggcg caatgcctga atggacatgc cttcctcccg
     8341 tacgcggcac tcgagtggag catgatcttg tcgaaaaccg gtgtccactt ttccggatca
     8401 tgctctaggt tttcttgaac gccggcatga cgtccttggc gaaccagcgc aactgttcct
     8461 tgaattcctt gggggaaagc ccctcggccc aatggatcat gaagttctcg aggcccggat
     8521 acttcgcctc gatcgatttg atgccgtcga tcacctcggc cggcgggcca cagaaccagg
     8581 ccttctgcgc cacgccgtcc ttcagatggg gcgtgcgcgc gggcgcaccc ggcgagcccc
     8641 aggtgcggcc ctgctcgtcg gcatagcgca cgaagccgaa cggcgcgaac cacttgtaac
     8701 gttcgtcgtg cgccggctcg atgcggcgca ccgcttcgtc gtggctgtcg gcgagataga
     8761 cgccggcgcc ccagatgacg tcctcgccga gttgcttgtt gcggccgtgc ttgaggcagg
     8821 cggcatgata ggcgcgcacc acgtcatcga ggatcttctc gccgttgagc gtcaccatcg
     8881 ccttgaggcc gtattgcgcc atcagctcga tggtcttgcc gctggcgatc ggcatccaga
     8941 tttccaccgg caggtgcttg ggccgcggca ccagagtgac gtccttgagc ggatacccgc
     9001 gatagtccac cggcggcgga cactcgaagt acttgccctt gaaatggaac gactgctcgt
     9061 tgaagcaggt cagcagcagg cgcaactgct cctcgaacag ctcgcggttc ttctccgcgt
     9121 cgaggagcgg cgcgccgaag gtctcgacct cgcgcgtgtg atagccgcgg ccgacaccga
     9181 ggatgacgcg gccgtcggtg accacgtcag ccatcgcgta atcctcggcc atccgcagcg
     9241 ggtgccacat cggcagtatg ttgaaggcgc agccgaactt gaggcgcttg gtctgggtgg
     9301 cgagccacag tccgagctgg atcaggttgg gaaagacctc gtatccctcg cgttggaaat
     9361 gatgctcggc cgtccacagc acgtcgaagc cgagttcgtc catgagctga gcgacgtcgc
     9421 gcgcggtgaa gaacgcctcg tgcagctgcc ggtcggaata gcgccgctca ttggcgggcg
     9481 tgccgttgat cccgacattg tcgagctcga tctgaccgac gtagaggacg tgaaacttct
     9541 tgatcatggg ctctcaccag gacttgttcc ggagcggccg tgcggccgaa tcaacaaatt
     9601 caaggcgcgc ggcgccgcgg cggcaccccc gccaataccg cagatgagcg acgtgtgcca
     9661 ctagctctgc cgccgcttgc gctccgcctc gtcccaggcg gtcagtgcct gaaagtcggg
     9721 gacgaagctc agacccttct gcgcgtccga cgacatcgcc gattgcgagg tcacaacatc
     9781 gaccagcgcc ggcgcgttgc gcaaggccct ctgcaaggcg gggcgcagcc cgtccggcgc
     9841 ctcgacgcgt tcgccgtaaa ggccaagcgc ccgcgccatc gccgcatagt cggaatggcg
     9901 cagcgtcgtg ccgacgacgc gtccgccgta gttctgttcc tgatcgatgc gctcgatgtt
     9961 ccaggcggcg ttattggaaa cgatgaacac gcacttcgcc ccgtgccgga cggcggtgtc
    10021 gatttccatg gcgttgatcc cgaaggcgcc gtcgccgttg accgagatga cctggcggtc
    10081 cggcatggcg agcgccgcgg caatggcgaa cggcacgccg acaccgaggc agccgaaggc
    10141 gccggcgtcc atgtaggtcg acgcgctaag gccggtgcgc gcaaagctca acagatcgcc
    10201 gccgtcggcg accgccacat aatccggatc ggctaggtcg gcgatggcgt cgaagatcgc
    10261 gcgcggatgg atcttgccgt cggcgccggt cgccgggcgc ccgccagcgg cggccgcggc
    10321 ggcgacgcgg tcgcggtggc ggcggcgcat gcgctcgagc caggccgcgt cggcggcggg
    10381 cgcgcggttg cccgcgatct cgaccatggc ggcgagcgcg agatcgggcg acgcgagcaa
    10441 ttccacctgg ccgcggcggt tgtcgatcag ctcgccggca ttgtcggcaa ggcggatgaa
    10501 gcgcgcctgc gggaacaccg ccggcgatcc gtagccgagc tgataatcga gccggcgccc
    10561 gatgagcagc acgacgtcgg cctcgctcat ggcggcgccg cgcaccgcgg cagcgaccga
    10621 gggatgatcg gcgggcacca ggccgcggct ttcctgcgtg tcgaggtaga gggcgccggt
    10681 ggcctcgagg aggcgcagca gcggcgaagc ggcgccgcgc gccccgcgcc cggtgacgac
    10741 gagcgggcgc ttcgccgccc agaacacctc gaccgccgtg gcaatcgccg ccgcctccgg
    10801 cggcagccgg cgcggcggct tggcttgcat ccattcgtcg agcacgagct gcggcggcac
    10861 gcgggcacgc agcacgtcga tcgggatttc ggcgtagacc gggccgggct cgccggcatc
    10921 gccggtcgcg cgcgccaccg cctcgtcgag ctcgcggacg acctgctcgg cgaggttgag
    10981 cgtccgcgcc gtgcgcgtga ccggccttag aatgtcgaca tgcgggatgc cctgcagcgg
    11041 tcccatgttt gcctgcggac gcggcgggca gccgccgatc agcaggaccg gagcgcgcgc
    11101 cagaaaggca ttggccaccg ccgtgaccgt gttggtgacc cccggcccgg cagtgaccag
    11161 ggcgacgccg aacccgccgg caagctcggc gtgcgcgtgc gccatgtgca cggccgcgcc
    11221 ctcgtcgcgc acatcaatga tgcggatgcc ctgctgggcg acgtggtccc agagcggctg
    11281 gatatgcccg ccctgcaggc cgaagacgcg gtcgatgccg cgcgtcttga ggaagcgcgc
    11341 cacccacgcg gcgcaggtct gcggatcagc gttcaagtcc tgcgttgccg tgaccgcttc
    11401 gttcatggcg cgcctatagg ccgagatagg cccgccggat ctccggcatg gccgcaagtg
    11461 tcgccggcag tccttcgctg aacaggcggc cctcggcgat cacgtaggcg tagtcgctca
    11521 ccgcaaacgc cagatggacg ttctgctcga ccagaagcac ggtcagcccg gtatccttga
    11581 gcgccttgag cgccgcgaac agctgataga cgaagagcgg cgccagcccc agcgacagct
    11641 cgtcgatgat caggatctcc ggatcggtca tcaggccgcg ggcgatcgcg agcatctgct
    11701 gctcgccgcc ggagaacgtg ccggccttct gcctgcgccg ctccttgagg cgtgggaaca
    11761 aagtgaacac ccgctccagg cggtcggcat agctgtcggc gccgcggcgc gtgaacgcgc
    11821 ccatttccag attctcgtcg accgtcatgg tgctgaacag ctggcggcct tcgggcacga
    11881 ggacgagacc gcgcgccgcc ttggcatggg cgggcagccg ggtcacgtcc tcgcccttga
    11941 acagcacgcg cccgctccat ggcgtgagcg tgccgacgac ggcgcgcagc atcgtggtct
    12001 tgccggcgcc gttggcgccg acgagcgtgg tgaggcggcc gcgcgcggcg gcgagcgaga
    12061 ggccccacag cacctgcacc tcgccgtagc cggtggcgag cgcctcgacc tcgaggagcg
    12121 catcgctcat gccgccgcgc ctccgtgcag cttttcggca agcgccggat cgccgagata
    12181 ggcttcgatc acggcggcat tgttggcgat ctcggcgggc gtgccctcgg cgagcttctg
    12241 ccccgagttc aaaacgacga tgcgatcgga aaggcccatg atcgcctgca tgaggtgctc
    12301 gatgatcagg atggcgacgc cgcgctggcg gatgctgcgg atgaccgtca gcatgcgctc
    12361 gatttcggtc gggttgaggc cggcgagcac ctcgtcgagc agcaggagca gcggctgcgc
    12421 cgcgagcgcc cgggccaact cgaggcgctt cttcccggcg atggtgagct gcgctgccgg
    12481 cgtcgccagc cggtcttcga ggccgacgaa caccgcgacc tcgcgcgcca ccgcgcgggc
    12541 gcgcgcaagc ggcagattct cgcgcccgaa gcaggcgccg accgtgcagt tctccagtac
    12601 ggtgaggtcg gtgagcggct gcacgatctg gtgcgtgcgt gccagaccat gccgggcgac
    12661 gcgataaggc ggcttcccgg tgagatcggc gccggcgaat ttcacccacc cctggtcggg
    12721 tgcaaacacg ccgttgatca ggttgaacac ggtcgacttt ccggcgccgt tcggcccgat
    12781 caggccgagg atttcccgct cgcggacggt gaagctcagc tgattgaccg cccgcagccc
    12841 gccgaagctt ttgctcaggc cgtcgatctc gaggagggcc gtcattcgag cacctgcttc
    12901 atgcgcggcc agcggccgta gatccagccc atgagcccgc ccggcacgaa cagaacgatg
    12961 atgagcagga gcacgccgga gacgaccaat tgaaaattcg aaaaagtctc cgaggtgagc
    13021 agccagccgc gcagctcctc gtagagatag gcgccgaccg ccgcgccggt gacggtgccg
    13081 cggccgccga gcatgacgat caccatcgct tcggtcgaca ggctcagatc gaacgcgtcc
    13141 gacggctgga tgaacgcgct cttgaagaaa taaagaccgc cggcgagcgc gggcaggaac
    13201 gcggagaggc tgtaggcgag cgccttgtac agcggcgccg gcacaccgag caccacggcg
    13261 gcatcttcgt tctggccgat cgcgatcagg ccgagcccga acttcgacgt tttgatcgca
    13321 tagctcagat agagcgagag ccccatcacc gcgaccagca ggaagtagat cacccacagc
    13381 gaccgcatcg ccccgccaag cggctcgaat atctgcgtcg agagataaag gccggcggaa
    13441 ccgccccacg gctcgaagtt ggagacgaag gcctggacgc cctggttgat gccgatggtc
    13501 gcgagggcaa aaaaggcacc gcgcaggcgc aggacgccga ggccgaagat gagcgccaga
    13561 agactcacgg cgacgccggc ggcaagctcc gccgccgcca gcggccaggc gtgcgcgctg
    13621 accagataca cgctgatata gccgccgagg ccgaagaaga cgatgctgcc gaaattgatg
    13681 tatccggcat agccgagcat gatgttgaga ttgctggcga gcgtaatgta gacggcggcg
    13741 agcagcaggc tctcgcgcag ctgcacgttg tcgccgatga gcggcacgac ggcaaaggcg
    13801 gcgacggcga gcgcgatgat ccagaaaaag gggcgataga gcatcgggct cgcccgatcg
    13861 cggtcgatcg cgccggtctt ctcgcttttc atgagcgcgt gaaggcgaaa acgccgcggg
    13921 ggaaaatgat cagcaccagg acgaaaagaa cgaactcgat gaccagcgtc cagctcaccg
    13981 gcatgaactg cgcggcgaag ccctcgacca ggccgagggc caccccgccg acgagcgcgc
    14041 ccgccggatt gccaagcccg ccgagcgcgg tgacgacgaa gctcttgagc tgataggcgt
    14101 cgccggcaag cacggtgaac gggaacatgg tcgcgatcag catgccggcg gcggcggcga
    14161 gcgcgacgcc gagaccgaag gcgagcgaca gcacccgggt cgtgggaatg cccgacagtt
    14221 cggcggcctc gcggttgtcg gcaaccgcac gcaccgcctt gccgagccgc gtgtggtaga
    14281 ggaacaaata cagcaggccg gcgatgaccg cggtcagcgc cgcggcgaga aggtgcgtgc
    14341 cagggaaggt gtagcgctgc caggtcacgc cgggaagcga caccggcacg ttgaacagac
    14401 cggtgcccca gaccgcggtc gcgagcccga tcaccacgag gttcaccgaa aacgtggaga
    14461 gcaggaacat cagcggcggc tgcccgatca tgcggtgcac cgcgatccag tacagcccga
    14521 cgccgaccag gaagccgccg aggaggatca acggcaagac cgcgtagggc ggcagatcga
    14581 gcgcgctggt caagaggtac agcgcgaaca tgccggcgac gatggcggcg ccatgggtca
    14641 ggttgacgac gttcatgacg ccccagatca gcgtcagccc catggccgcc agcccgtaga
    14701 ccgagccgat cagcacgccg tcgacgattg aagcgatgat gcccagcatg cggaggactt
    14761 gaccggcccg cggcgaaagg acgggcgcgc gggagcgtcg ccgccgcccg tcccctagcg
    14821 ccgctcgcgc tcagtgtagc ggaggctcaa tgcagcggat acaggatatc ggcggtctgc
    14881 gccgacttcg gccacaccac ctcccgctcg agctggccgt ttttcttctg ccactgcgcc
    14941 agcaccatct cgtgggcggt ctgcagcccg tggtgtccgg catcggtcgc tatcttgtag
    15001 tggccgaaga aggtggtgac gtccatggcg ttgagcgccg ccacaacctt gtcggcgtcg
    15061 atcgagccgg cctgctcgat ggcgtgctgc agaatgatgc cgccctgata gccggaggcg
    15121 gcgtgatagt ccggggcgat cttgaacttg tcctggaacg ccttgacgaa ttcggcgccg
    15181 gtcggtccga actccggctt gtaggtggcc tggatctccc actgcgaggg cacggcgatg
    15241 ccgaacgccg cctccccgag gctggcaaat tccgggctgt cgggcgcgac cagcagcgcg
    15301 acgtatttga ggttggcctt ctggtcgtag atctgccgcg ccagcgtggc gccgtcggtg
    15361 tagtgtccgc cgccgagcaa cgcgtcggcc gacgcggtaa cgatcttgtt gatgatcggg
    15421 ctgaagtcgg tcgtcgccgg cgcgtaggat tcatcgagca cgatcgaaaa tccgctctcc
    15481 ttggcctgct cgcgggccgc gaccgtcacc gccttggaga acggatcgtc ggagtagacg
    15541 aacgccacct tggcatgcgc gctcttcgat tggagcgcgc cgatggcgcc gctgaggtag
    15601 tggtcggccg aggtgatcac ctggaccaga tatttgttgc cgagcgtata ggtcttcggc
    15661 tccgccccgc cggtgatcag catcagccga ccgtactgct cggtgatcac cgccgccgtc
    15721 gcgcacagcc ccgacgaata ggggctgaac aggaactgcg ccttgtcctg gacgatcagg
    15781 cgcgtgtaga gctgctgcac gcggccgccc tgcgactggt cgtcataggt gacgtagcgg
    15841 agcttgtagc gcttgtcgcc gaccttcaat ccgccggcct cgttgacctg gtcgcgccac
    15901 agctcggcgc cgcgctgctg ggcgaccgaa tcgacgttga gcggcccggt ctgcgacaac
    15961 gtcatgccga tcgtcagcgt gtcttcctcg gcgaaggcgg gcgcggcaaa gaacattgcg
    16021 gccgcggcca gcaggcgcag tgcgctcatg atttcctccc aagttccggc ggcatggttt
    16081 cggcgatgct atcccatcgg cattggcgtc gccactcgat gccgccgccg cggcatcgac
    16141 aattctcggc caggctgcgt tacaccggcg cacacaagca aagttgaatc gttccagaaa
    16201 ataaggcgac ggctgctcat ctaaggggca ctgattgcgc cgcactgtca tttttcgcag
    16261 tagtagatca gatataaaga ggcccgatgc aggaggcgtt gcaacagcag tttgtcgaga
    16321 gggccgcgcc tgcggagcct cacgctaagc tgcgcgtgat cctggaaacg cagcgcgcgg
    16381 cgttcctgcg cgccggcgcg ccctcgctcg aggaacgccg cgccgacctg gcaaggcttg
    16441 gcggcgcgat ccggcacgag agcgggcgca tcgccgacgt gatctcggcg gatttcggcc
    16501 atcgctcgcg ccacgagacg gaacttgccg aaatctttcc cgtgctgtcg gcgatccgcc
    16561 acgcgcgcag ccatctgcgg cgctggatgc ggccgaagcg ggtgccggtc ggcctcgagc
    16621 tcaggccggc tcgcgccgcc atcctgcatc agccggtcgg cgtcgtcggc atcatcggcc
    16681 cgtggaacta tccgttccac ctggcgatca tgccgctgat cgcggcgctc gccgccggca
    16741 accgcgtgat ggtgaagccc tcggagctcg cgccgcgcac cgccgagttc ctcgccgagt
    16801 tcctggccgg cctgtttccg ttcgagaagg tggcgaccat cgtcggcggc gccgacgccg
    16861 gcgcggcgtt ctcgcggctg ccgttcgacc atctgttcta caccggctcg accgccgtgg
    16921 gccggctcgt gatgcaggcg gcggcggaaa atctcacccc ggtgacgctc gaactcggcg
    16981 gcaaatcgcc gtgcatcctc ggcgaggatg cgcacctgcc ggcggcggtc gagagcatcg
    17041 tctacggcaa gctgctcaat gccgggcaga cctgcatcgc gcccgactac gtgctgctgc
    17101 cgtcccgcca gctcgacgcg ttcgtcgaac tggctgtgca tgcggtgcaa aaattctatc
    17161 cgacgctcaa ggacaacgcc gactacacct cgatcatcaa cgaacgccac tacgcgcggg
    17221 tagcgcagta tgtggccgaa gccagggcga gcggggcgcg cgtcactgag atcaatcccg
    17281 cgggcgagac gctggctccg gacgcgcgca agctgccgcc gacgctggtg atcgatccgg
    17341 gcgaagagct cgccgtcatg cgcgaggaaa tcttcggccc ggtgttgccg atcaagacct
    17401 acagctggct cgacgaggcg atcgactacg tcaaccggcg cccgcggccg ctcgcgctct
    17461 actatttcgg caccgacgcg accaagcgcg acgaggtctt gcgcaagacc atctccgggg
    17521 gcgccgcagt caatacgaca ctgtttcaca tcgcggcgga aggcctgccg ttcggcggca
    17581 tcggcgcctc gggcatcggc gcctatcacg gcgagttcgg gtttcagacc ttctcgcacc
    17641 gcaagggcgt tctgctgcag agccgcctca acgcttcacg cttcctgcat ccgccgttcg
    17701 gccgcatcgc cgacctgatg ctgagattcc tcaaccgctg acgttgctca gccgccgccg
    17761 aagcaaattt caccaagatc gacggctggt ctcacccgct cgtccccgcg aaagcggcga
    17821 cccagcgcat ttatcgctac gcaggcgcgt ccagcatgga ttcccgcatg cgcgggaatg
    17881 agcggaaagt gcagctgccg cgctactccg ccgcctggcg cgacggcggc tgcacactct
    17941 gcagtccgtc cacgtcggcc gccgagatcg tcgtgcgcac catgaaccgc gcctcatgcg
    18001 ccggccacgg ccggccgcga tgcatcgtgg cgcggttgtc ccacatgacg acgtcgccgt
    18061 tgcgccaggt gtggacgtag ctctggcccg gcgcggtcgc cgcgtcggtc agttcgtcga
    18121 ggagtttttg cgcggcggcc tcgtccattc cctcgatgcc gtaggcgtgc gaggcgatgt
    18181 agagcgcgct gcggccgttc gccggattct tccacaccag ccgccagcat tgcggcggca
    18241 gcgccgtgcg ctcgaccggg gtggcgaggc cgggcgcgat cttgctgcgc gaatgggcgt
    18301 agtcgtgcca ggcgaaggaa ttttcgagcc gctggcgcag tgccgcctcg agccgcgcaa
    18361 aggcgagacg ggtcgagacg tattcggtct ccccgccctc ggccgggatg atccgcgccg
    18421 acagcaccga ggcgagcgcc ggcacctcct tgaacgtgct gtcggtgtgc cagagctggt
    18481 tggccttgtt gcgcaacgcg aagcggtggt caggcggcac caccttgccg ttctcgtcca
    18541 tcgtcgtgag gatcacgagg ttggtgccgg cgccgcgcga gccgaccttg gtgatttcca
    18601 gcgacccgaa gcggcgcgag aacgcgatct gcacgtcgtc gctcacgtcc tggccgcgga
    18661 acaccaggac cgagtgttcc tcgaaggccg cgcgcaccgc cgcgtaggcg gcatcgtcgg
    18721 ccgcgacgtc ggcgagcgtc acgccgcgca attcggcgcc aaaaccggga cccaggggga
    18781 caatgtccat cggcgagcct ccctcgctcg gggtgttttg cggcaagttt cctccaaatc
    18841 ggctcggccg acaaggcggc gcgcgaagcc gccgctcgtc ctttttttgc gctcgctccg
    18901 gtgccctccc accgcactga cttccgggcg gcgcgcaaaa tggcgatggg cgccaagctt
    18961 cgccgatctt cgtagccgca gatcaaaaag gagaagtgat aacgcaaccg tcgggcgcct
    19021 cgcccagagc gatttaccac acttcatcat cgtgcgtgaa tgcaaccatg ggacaaagct
    19081 attctaaacg gcgcgcgatc ggttaacgtg ggtcacgcca gccgaccgac gcagtggcaa
    19141 cgattttcca aatccccgtg gtcatttttt gatgcgtatt tgttttgtgt gccaatctgg
    19201 ggttatggaa ccaaaggcga ttctcctggc agcttctctg cggctgtatt ttccagaaaa
    19261 cgtcgagttg attgccgccc atcccgctct gacgggcccg ttgcagacag agaccctgaa
    19321 agcgttggcc gcactcgatg tcggaaaaat tccggtgcgg aatccgctac ggcccgacta
    19381 tccaattggt cataaatttg cagccctgat gctgctcgac gggcctgatt gcgggatttt
    19441 tattgacacc gatgtgctgg tgatgaccgc tccccaatca ttgccggact cactcgccgc
    19501 cgtacccgca agtttcaatc accacgccaa gccggtatgg gagcatgtct acaatcgctt
    19561 tgggctgacc cttccattgg cttcaccgcc aactctcgta tcgcgggacc ggacggcgcc
    19621 ttattttaac tcgggcgtca tagtcgtacc cggacccgtt gctaaaaggc tcgccgcgag
    19681 ttggattgat acggcaatgc agatcgatgg tgatccgcag gtgccagatc ggagcaagcg
    19741 tccgaatctc tcccaactcg ccctccctgt tgcggcagct cgcgtgggcc tcggaattga
    19801 ggtgcttgat ccacgatgga atttccccgc ctggtcatgg cggattgccc aagagggagt
    19861 gccgattctt ttccactacc agaccatgga acggctgcgc gaagaggagc cgtcgcttcg
    19921 cgttgcgatg caggctgcgg aaatccatcc gagcgttcgt gatgcacttg cagctttctc
    19981 ctacatctga gcgcgccagc ctgggcggca tctttgttag agacatgcaa gaaggggctc
    20041 ccactgagat cacgacgact tagccgctag aagggaacct caccacctcc ccacctgcct
    20101 gcttcgagcc cgcgcaaagt ggcgagcggc gcgaagcctc gccccatctg cgtagccgcg
    20161 catcgaaaaa aggggaatac ttggtcgccg cgcctgcgcg cacgtaggtt ggccggaccg
    20221 agacaagtgg agacgaaaaa gagcgtccac ttcatcttca ttgccggcgc cgaaggctcc
    20281 ggcaccacac tgatgtctcg gcttctggcg gcaccaaaga ccgccgccag tctcggcggg
    20341 ctctatgtca agacgccgc
//
LOCUS       DATMQB010000452         2678 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2390525, whole genome shotgun sequence.
ACCESSION   DATMQB010000452 DATMQB010000000
VERSION     DATMQB010000452.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2678)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2678)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2678
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2390525"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1367)
                     /locus_tag="VNY79_13175"
     CDS             complement(<1..1367)
                     /locus_tag="VNY79_13175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011508692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0008519 - ammonium transmembrane
                     transporter activity [Evidence IEA];
                     GO_process: GO:0072488 - ammonium transmembrane transport
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HWX73445.1"
                     /translation="MTLKKFSRAGLVALAGAVLLAIVLSLPTFHGSYAQTSTTTEAPA
                     TPAAAAPAAAEAAPPACDAKTLEKCTPNSGDTAWMLTSMAIVLMMTIPGLALFYGGMV
                     RKKNVGDTVMTSFAITCLVSILWLFFTYSLAFRSGTPFIGGFDRAFLQGIVSNTFKDG
                     VGLNIGTPNSLAPTIPETVYSMFQLTFAIITAALIAGSFAERMKFSAMLWFIGLWAIF
                     VYSPIAHWVWGPDGIFNSANPDAKFHVLDFAGGTVVHVNSGTAGLMAALMLGKRKDAG
                     PGHNMVLTMIGASLLWVGWFGFNAGSAVTAGMQAGMAMTVTHLATATAGFTWMIVEWI
                     LRGKPTVIGICSGAVAGLVAITPASGFVGPMGAFWIGVAAGIVCYWGVTGLKHFFGYD
                     DALDVFGVHAVGGATGALLTGVFAVEQYGGTAGLIEGNPGQVLTQIVGIAAVFVYDAV
                     VTLIIL"
     gene            complement(1407..1745)
                     /locus_tag="VNY79_13180"
     CDS             complement(1407..1745)
                     /locus_tag="VNY79_13180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HWX73446.1"
                     /translation="MKIVMAIIKPFKLDEVRDALTKIGIQGLTVTEVKGYGRQKGHTE
                     IYRGAEYAVSFLPKIKLEVACPSDQVDKVIETITASAKTGQIGDGKIFVLGLDHAVRI
                     RTGEIDASAL"
     gene            complement(2033..2371)
                     /locus_tag="VNY79_13185"
     CDS             complement(2033..2371)
                     /locus_tag="VNY79_13185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018323564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HWX73447.1"
                     /translation="MKLVIAIIKPFKLEEVRDALTAIGVHGMTITEVKGYGRQKGHTE
                     IYRGAEYAVNFLPKIRIEVAVAADAADRVVEAIGTAAKTGQIGDGKIFVAPIEQAVRI
                     RTGETDADAL"
     gene            complement(2486..>2678)
                     /locus_tag="VNY79_13190"
     CDS             complement(2486..>2678)
                     /locus_tag="VNY79_13190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="acyl-CoA thioesterase II"
                     /protein_id="HWX73448.1"
                     /translation="SLDHAMWFHRPFRADEWMLYVQDSPSLAGSRGFTRGEIFASDGT
                     LVASVAQEGLLRQRRPKPK"
BASE COUNT          485 a          840 c          900 g          453 t
ORIGIN      
        1 aggatgatga gcgtcacgac cgcgtcgtag acgaacacgg cggcgatgcc gacgatctgg
       61 gtgagcacct gcccggggtt gccctcgatc agcccggcgg tgccgccgta ttgctcgacg
      121 gcgaatacgc cggtgagcag cgcgcccgtc gctccgccga ccgcgtgcac gccgaacacg
      181 tcgagcgcgt cgtcgtaacc gaagaagtgc ttgagcccgg tgacgcccca gtagcagacg
      241 atgccggcgg cgacgccgat ccagaacgct cccatcgggc cgacgaagcc ggacgccggg
      301 gttatggcga cgagcccggc caccgcgccg gagcagatgc cgatgacggt cggcttgccg
      361 cgcaggatcc actcgacgat catccaggtg aagcccgcgg tcgcggtcgc aaggtgcgtg
      421 acggtcatcg ccatgccggc ctgcatgccg gcggtgaccg ccgagccggc gttgaatccg
      481 aaccagccga cccacagcag cgaggcgccg atcatggtca gcaccatgtt atggccgggc
      541 ccggcgtcct tgcgcttgcc gagcatcagc gccgccatca ggcccgcggt gcccgaattg
      601 acgtgcacca ccgtgccgcc ggcgaagtcg agcacgtgga acttggcatc gggattggcg
      661 ctgttgaaga tgccgtccgg tccccacacc cagtgcgcga tcggcgaata gacgaagatc
      721 gcccacaggc cgatgaacca gagcatcgcc gagaacttca tgcgctcggc gaacgatccg
      781 gcgatgagcg ccgcggtgat gatcgcgaac gtcaactgga acatcgaata gacggtctcg
      841 ggaatggtcg gcgccagcga gttgggcgtg ccgatgttca gccccacacc gtccttgaag
      901 gtgttgctga cgattccctg caggaaggcg cgatcaaacc cgccgatgaa cggcgtgccg
      961 ctgcggaacg ccaggctgta ggtgaagaac agccagagga tgctgaccag gcaggtgatg
     1021 gcgaagctcg tcatcaccgt atcgccgacg ttcttcttgc gcaccatgcc gccgtagaac
     1081 agcgccaggc cgggaatggt catcatcagc acgatggcca tggaggtgag catccaggcg
     1141 gtgtcgcccg aattcggcgt gcatttctcg agcgtcttgg cgtcgcatgc cggcggcgca
     1201 gcctcggcag ccgcgggtgc ggcagccgcc ggcgtcgcgg gcgcctcggt agtcgtcgaa
     1261 gtctgcgcgt acgatccatg gaacgtcggc aggctcagca cgatggcaag cagaaccgcg
     1321 ccggcgagag cgacgagccc cgcacgcgag aatttcttca aggtcatgat ttcactcctg
     1381 tccgggcaga tggaggtgcg ggttgtctag agggctgagg catcgatctc gccggtgcgg
     1441 atgcggaccg catgatcgag gccgagcacg aagatcttgc cgtcgccgat ctggccggtc
     1501 ttcgccgagg ccgtgatggt ctcgatgacc ttgtcgacct gatcggaggg gcaggcgacc
     1561 tcgagcttga tcttcggcag gaagctcacg gcatattcgg cgccgcgata gatttcggtg
     1621 tggcccttct gtcgcccgta acccttcacc tcggtgacgg tcagcccctg aatgccgatc
     1681 ttggtgaggg cgtcgcggac ctcgtcgagc ttgaacggct tgatgatggc catgacaatt
     1741 ttcattggtt caatctccca gttgtcgatc aagcgtcgcg ctcgaccgag caacatcaac
     1801 cagcccgcag gcgtacccgc gcgcacccga cgcagcatta gaatcaagcg gcgtgccagt
     1861 tcacggaaac cggcttgccg cagtgggaaa cggcgcttgt tgggatgaga atcgcgaccg
     1921 ggtgtctcgc gcggagatac gcagcgaggg cgtccgccca aagatcggac accgtgccta
     1981 gaaactaggc gattgccgac gaagccaggt cgcaggccga ccggacgcgg ggttagaggg
     2041 cgtcggcgtc ggtctcgccg gtgcgtatgc gcacggcttg ctcgatcggc gcaacaaaga
     2101 tcttgccgtc gccgatctgc ccagtcttgg cggcagtacc gatcgcctcc acgactcggt
     2161 cggccgcatc cgcggcgacc gccacctcga tgcggatttt gggcaggaag ttcacggcgt
     2221 attccgcgcc gcggtagatt tcagtgtggc ccttctgccg gccgtagccc ttgacctcgg
     2281 tgatggtcat accgtggacg ccgatcgccg tgagggcgtc gcgcacctct tcgagcttga
     2341 agggcttgat gatggcgatg acgagcttca tgtagcgttc cccgggcgcg aagatctgat
     2401 gtccacacta tcggcaaggc gggcccgaat taagcagttt attggcggaa gtcccccgaa
     2461 ggagccgggg ctcgttcggg gggccctatt tcggcttcgg acggcgttgc cgcagcagtc
     2521 cttcctgcgc aaccgaggcg accagagtac cgtcgctggc gaagatctcg ccgcgggtga
     2581 agccgcgcga gccggcgagg ctcggactat cctgcacgta gagcatccac tcgtcggcgc
     2641 ggaacgggcg atgaaaccac atcgcgtggt cgaggctt
//
LOCUS       DATMQB010000453         3142 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4250112, whole genome shotgun sequence.
ACCESSION   DATMQB010000453 DATMQB010000000
VERSION     DATMQB010000453.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3142
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4250112"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..490
                     /locus_tag="VNY79_13195"
     CDS             <1..490
                     /locus_tag="VNY79_13195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013499853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DNA gyrase subunit B"
                     /protein_id="HWX73449.1"
                     /translation="LTEETERGWTGQFNEHGFQFERTLRGVKEVAVIDQALLGSADAR
                     RLDEFAPVLQQLYPRPTPPATLRRKDEETPIHGPVGLFEAVTGAGRKGVALQRYKGLG
                     EMNPSQLWETTLDTHARSLLQVSVKEIDEANTIFDELMGDKVEPRRVFIEQHALTASV
                     DV"
     gene            complement(685..2142)
                     /locus_tag="VNY79_13200"
     CDS             complement(685..2142)
                     /locus_tag="VNY79_13200"
                     /EC_number="6.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004356 - glutamine synthetase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006542 - glutamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine synthetase family protein"
                     /protein_id="HWX73450.1"
                     /translation="MSFVEHHGLWTGEQKRHAKDAAQAIKKNKLELVRFSFADQHGVL
                     RGKTLLAADALAAMASGVTMTTTLLAKDTAHKTVYPVFTAGGGFGMAEMQGGGDLLMV
                     ADPATFRVLPSAPNTGWLLCDIFFADGKPVPFSTRQILRDALAKLAAAGFDFRAGLEV
                     EFHLFKLENPRLAPEDATWPPCAPEVSLLNQGYQYLTESRFDQLDAALAPIWRGVVAL
                     DMPLRSLEVELGPSQCEFTFRPQTGLAAADTMVLFRAATKQIARRHGLFASFMCRPAL
                     PNLFSSGWHLHQSLLERGRKVNAFAGGERDGLSATGLYFLGGLLAHAHAAAAFTTPTV
                     NGYKRYRPYTLAPDRAIWARDNRGVMVRVLGERGDPATRLENRVGEPAANPYLYMASQ
                     IHAGLDGIAQRRDPGPSADTPYETKAQALPKNLGEALAALRADATFRKDFGAGFIDYY
                     TRLKQAEFARFTAEAGGETVGDVTAWEQNEYFDLF"
     gene            complement(2323..>3142)
                     /locus_tag="VNY79_13205"
     CDS             complement(2323..>3142)
                     /locus_tag="VNY79_13205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005488 - binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="RHO alpha subunit C-terminal catalytic
                     domain-containing protein"
                     /protein_id="HWX73451.1"
                     /translation="NWLQSLEVGIDPVHTSFLHRFFEDEDPDRGYGRMFRDKSKDSDM
                     PMTRIMRDFPRPRIEIEPTDYGFRLITLRQISDAKAHVRVTNLIFPNAFIIPMSREMT
                     ISQWHVPIDNVKHYWYAIFTSFGAAVDKDEMRRQRLELYELPDYVPRKNSSNDYGFDA
                     HEQEHATYTGMGADINVHDQWACESMGAIQDRTQEHLGTSDKAISAYRRLLRQALEPS
                     GNGARPMMVLDAAQAATITGPACVDGIGPAGDWQGYWQRTDADRRKTKTWANGR"
BASE COUNT          511 a         1013 c         1092 g          526 t
ORIGIN      
        1 cctgaccgaa gagaccgagc gcggctggac cgggcaattc aacgagcacg gttttcagtt
       61 cgagcgcacc ttgcgcggcg tcaaggaagt cgcggtgatc gaccaggcgc tcctcggctc
      121 cgccgatgcg cgccggctcg atgaattcgc gccagtgctg cagcagctct atccgcggcc
      181 gacgccgccg gcgacgctgc ggcgcaagga cgaggagacg ccgatccacg ggccggtcgg
      241 cctgttcgag gcggtgaccg gcgccggccg caagggcgtc gccctgcagc gctacaaggg
      301 cctcggcgag atgaacccga gccagctctg ggagacgacg ctcgacaccc acgcgcgctc
      361 gctgctgcag gtcagcgtca aggagatcga cgaggccaac accatcttcg acgagctgat
      421 gggcgacaag gtcgagccgc gtcgcgtgtt catcgagcag cacgcgctga ctgcaagcgt
      481 cgacgtttag tcgcacgcct tccttctcgc tgccaggatg ttaaaatgac caacttgatg
      541 gtcatttagg tcaaattgag cagtacgggc ccgttcgtca ctaacgcgcc cgccgttgcg
      601 cgagacagga cgaaggcgtc gacgtcgtcg cgtcacctca cgacccccct ccccgaccct
      661 cccccacaag gggggaggga gcggtcagaa cagatcgaaa tattcgttct gctcccaggc
      721 ggtgacgtcg cccaccgtct cgccgccggc ctcggcggtg aagcgcgcga actccgcctg
      781 tttgaggcgc gtgtagtagt cgatgaaacc ggcgccgaag tcttttctga aagtcgcgtc
      841 ggcgcgcagc gcagcgagcg cttcgccgag atttttcggc aaggcttgcg ccttggtctc
      901 gtagggcgtg tcggccgaag gtccgggatc gcggcgctgc gcgatgccgt cgaggccggc
      961 gtggatctgc gaggccatgt acagataggg attggctgcc ggctcgccga cgcggttctc
     1021 caggcgcgtc gccggatcgc ctcgctcgcc gagcacgcgc accatcacgc cgcgattgtc
     1081 gcgcgcccag atcgcgcgat cgggcgcgag cgtgtagggc cggtagcgct tgtagccgtt
     1141 gacggtcggc gtggtgaaag ccgcggccgc gtgcgcgtgc gcgagcaggc cgccgaggaa
     1201 ataaaggccg gtcgcggaaa gtccgtcgcg ctcgccgccg gcgaaggcat tgaccttgcg
     1261 gccgcgctcg aggagcgact gatgcagatg ccagccgctg gagaacagat tgggcaacgc
     1321 cggccggcac atgaagctgg cgaaaagacc gtggcggcgc gcgatctgct tggtggcggc
     1381 gcggaacagc accatcgtgt cggcggcggc aagtccggtc tgcgggcgga aggtgaactc
     1441 gcactggctc gggcccagtt cgacttcgag cgagcgcagc ggcatgtcga gcgcaacgac
     1501 gccgcgccag atcggcgcca gggcggcatc gagctgatcg aagcgcgact cggtcagata
     1561 ctggtagccc tgattgagca ggctcacttc cggcgcgcac ggcggccagg tcgcatcctc
     1621 gggggcaagc cgcgggttct ccagcttgaa gagatggaat tccacctcga gcccggcgcg
     1681 gaaatcgaag ccggccgccg caagcttcgc caaggcgtcg cggagaatct gccgcgtcga
     1741 gaacggcacc ggcttgccgt ccgcgaagaa gatgtcgcag agaagccagc cggtgttcgg
     1801 cgccgagggc agcacgcgaa aggtggccgg gtcggcgacc atgaggagat cgccgccgcc
     1861 ctgcatctcc gccatgccga agccgccgcc ggcggtgaac accggataga ccgtcttgtg
     1921 cgcggtgtcc ttggcaagga gcgtcgtcgt catggtgacg ccgctcgcca tcgccgccag
     1981 cgcatcggcg gcaaggagcg tcttgccgcg cagcacgccg tgctgatcgg cgaaggagaa
     2041 gcgcaccagt tcgagcttgt tttttttgat ggcctgcgcg gcgtctttcg cgtggcgctt
     2101 ctgctcgccg gtccacaggc cgtggtgctc gacgaagctc atcgcggcag ggcggcggcg
     2161 cgaggccatc aggcgtcgtc attccgaggc gtcgggcagc ggcgagcccg gaatccacaa
     2221 tcacgaaccg ggcttatgga ttccgaatgc ctcgcggagc ctgtcgtcgg gccgcccact
     2281 tcgggccgga cccgttggct cggctccgga atggcgaaga attcaccgcc cattcgccca
     2341 cgtcttagtc tttcgccgat ccgcgtccgt gcgctgccag tagccctgcc agtcgccggc
     2401 cggaccgatg ccgtcgacgc acgccgggcc ggtgatcgtc gccgcttgcg ccgcgtcgag
     2461 caccatcatc ggccgcgcgc cgttgccgga cggctcgagc gcctgccgca acaggcggcg
     2521 gtaggcgctg atcgccttgt cggacgtgcc gagatgctcc tgggtgcggt cctggatggc
     2581 gcccatggat tcgcaggccc attggtcgtg cacgttgatg tcggcgccca tgccggtata
     2641 ggtcgcgtgc tcctgctcgt gcgcgtcgaa gccgtaatcg ttgctgctgt tcttgcgcgg
     2701 cacgtagtcc ggcagctcgt agagctcgag ccgctggcgg cgcatctcgt ccttgtccac
     2761 ggcggcgccg aacgaggtga agatggcgta ccagtagtgc ttcacgttat cgatcggcac
     2821 gtgccattgc gagatcgtca tctcgcggct catcgggatg atgaaggcgt tggggaagat
     2881 caagttggtc acgcgcacat gcgccttcgc gtcgctgatc tggcgcagcg tgatcagccg
     2941 gaagccgtag tcggtcggct cgatctcgat gcgcgggcgc ggaaagtcgc gcatgatcct
     3001 ggtcatcggc atgtccgagt ctttcgactt gtcgcggaac atccggccgt agcccctgtc
     3061 gggatcctcg tcctcgaaga agcggtgcag gaacgaggtg tgcaccgggt cgatgccgac
     3121 ttcgagcgac tgcagccagt tg
//
LOCUS       DATMQB010000454         2278 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1499503, whole genome shotgun sequence.
ACCESSION   DATMQB010000454 DATMQB010000000
VERSION     DATMQB010000454.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2278)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2278)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2278
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1499503"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..735
                     /locus_tag="VNY79_13210"
     CDS             <1..735
                     /locus_tag="VNY79_13210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002966212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73452.1"
                     /translation="RVENLDVFYGDLQALDGVSLEVEEGAIVAIVGANGAGKTTLIRA
                     LAGMQRQVRGRVIFRDVDISGWPSHRVCDLGLGQVAEGRQVFPTLSVAENLDIGAMLP
                     RARALRGKNRERVLRLFPVLAERARQPAGTLSGGEQQMLAIARCLMGAPQLIMFDEPS
                     LGLAPNIARMVLDTIRELNSEGITCLLVEQNVVLSLKLATRAYVLENSRIVMQGTGAE
                     LLNDDRVRHAYLGIAPAAGGAAHHGG"
     gene            725..1762
                     /locus_tag="VNY79_13215"
     CDS             725..1762
                     /locus_tag="VNY79_13215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase family protein"
                     /protein_id="HWX73453.1"
                     /translation="MADDDDGHFLRVRPDWLARRVEDILEPDLPIIDPHHHLWDFPEW
                     RYLFVDLLADLQSGHNIRQTVFVQCFAMYRADGPRELRSLGETEFVNGVAAMSASGGY
                     GDVRACAGIVGMVDLRLGKEAADVLSRHVAAGGGRFKGVRQIAAWDADERIRSASRAP
                     PPDLFQRPEFRQGFSCLEAADLSFDVWAYHTQLDQVADLARAFPGTRIALDHVGGPIG
                     IGRFAGRRDEVYADWCRAIDRIAACANIVVKLGGLAMRLGGFSFHRGAEPPPSEELAA
                     AWRPYVDRCIQSFGPDRCMFESNFPVDKGSCSYAVLWNAFKRLAQGYTAAEKAALFSE
                     TARKAYRLPPH"
     gene            complement(1804..>2278)
                     /locus_tag="VNY79_13220"
     CDS             complement(1804..>2278)
                     /locus_tag="VNY79_13220"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73454.1"
                     /translation="QYYTDEHMEKVMRRAVVAGISRRKLLDSLVLFSGAARIEGVHPL
                     QFGYVRRKVRTQRRYGMPIVNPLVFYPWRAYDALRAAGQWLRRMLRYRRILKRVVADP
                     ATYTYFDEAMQPVTGDSPDHFVEVFADKIPKTHGAPTPVTPPRHVADAPQPAMAK"
BASE COUNT          346 a          773 c          756 g          403 t
ORIGIN      
        1 cgcgtcgaaa atctcgacgt cttctacggc gatctgcagg cgctcgacgg cgtatcgctc
       61 gaggtcgaag agggcgcgat cgtcgccatc gtcggcgcca acggcgccgg caagaccacg
      121 ctcatccgcg cgctcgccgg catgcagcgg caggtgcggg gccgggtgat ttttcgtgac
      181 gtcgacattt ccggctggcc cagccatcgc gtctgcgacc tcggcctcgg ccaggtggcg
      241 gaggggcggc aggtttttcc aacgctttcg gtggccgaga acctggacat cggggcgatg
      301 ctgccgcgcg cccgcgcgct gcgcggcaag aaccgcgagc gcgtgctgcg cctgtttccc
      361 gtgcttgccg agcgggcgcg gcagcccgcc ggcacgctct ccggcggcga acagcagatg
      421 ctcgcgatcg cgcgctgtct gatgggcgcg ccgcagctta tcatgttcga cgaaccctcg
      481 cttggccttg cgcccaatat tgctcgtatg gtgctcgata cgatccgcga gctcaacagc
      541 gaggggatca cctgtctcct cgtcgaacag aacgttgtcc tctcgctcaa gctcgccacg
      601 cgcgcctacg tgctggaaaa cagccgcatc gtcatgcaag gtaccggcgc cgagcttctc
      661 aatgacgacc gcgtgcgtca cgcttatctc ggcatcgcgc cggccgccgg cggagcagcg
      721 caccatggcg gatgacgacg acggccactt cctgcgcgtg cggcccgact ggctggccag
      781 gcgcgtcgag gacatcctcg agcctgatct gccgatcatc gacccgcacc accatctctg
      841 ggatttcccg gagtggcgct atctgtttgt ggacctgctc gctgatctgc aaagcggcca
      901 caacatccgg cagacggtct tcgttcagtg tttcgccatg taccgggccg atgggccacg
      961 cgaactgcgc tcgctcggcg agaccgaatt cgtcaacggt gtggccgcca tgtcggcgag
     1021 cggcggctat ggcgacgtgc gcgcctgtgc cggcatcgtc ggcatggtcg atctgcggct
     1081 cggtaaggag gccgccgatg ttctgagccg gcacgtcgcc gccggcggcg ggcgcttcaa
     1141 aggcgtccgc cagatcgcgg cgtgggacgc cgacgagcgc atacggtcgg catcgcgggc
     1201 gccgccgccg gaccttttcc agcggccgga atttcgccag ggtttctcct gtctcgaagc
     1261 cgccgatctt tcgttcgatg tgtgggcgta ccacacccag ctcgatcagg tagccgatct
     1321 ggcgcgcgcc tttcccggga cgcgaattgc tctcgatcac gtcggcgggc cgatcggcat
     1381 cggccgcttc gcgggacgac gcgacgaggt ctatgccgac tggtgccggg cgatcgaccg
     1441 catcgccgcc tgcgccaaca tcgtcgtcaa gctcggcggc cttgccatgc ggctcggcgg
     1501 cttcagcttc catcgcggtg ccgagccgcc gccatccgag gagcttgccg ccgcctggcg
     1561 cccctacgtc gaccgttgca tccaatcctt cggacccgac cgctgcatgt tcgaaagcaa
     1621 ttttcccgtc gacaagggga gttgcagcta cgcggtgctt tggaatgcgt tcaagcgcct
     1681 ggcgcagggc tatactgccg cggagaaggc cgcgctgttc agcgaaaccg cacgcaaggc
     1741 ttatcgtcta ccgccgcact gaggccgccg ccgctccgcc tcggcgtctg cacgcgccgt
     1801 ttctcactta gccatcgccg gctgcggggc gtccgccaca tggcgcggcg gtgtgacggg
     1861 ggtcggcgcg ccgtgggtct tcggaatctt gtcggcaaag acctcgacga aatgatcggg
     1921 actatcgccg gtcaccggct gcatcgcctc gtcaaaatag gtgtacgtgg ccggatcggc
     1981 gaccacgcgc ttgaggatgc ggcgatagcg caacattcgg cgcagccatt ggccggccgc
     2041 gcgcaacgcg tcgtaggcgc gccacggata gaacaccagc gggttgacga tcggcatgcc
     2101 gtagcgccgc tgcgtgcgca ccttgcggcg gacgtagccg aattgcagcg gatgcacgcc
     2161 ctcgatgcgc gcggcgccgg agaacaacac cagcgagtcg aggagcttcc tgcgactgat
     2221 gccggcgacg acggcgcggc gcatcacctt ttccatgtgc tcgtcggtgt agtactgc
//
LOCUS       DATMQB010000455         2796 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1785504, whole genome shotgun sequence.
ACCESSION   DATMQB010000455 DATMQB010000000
VERSION     DATMQB010000455.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2796)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2796)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2796
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1785504"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1644
                     /locus_tag="VNY79_13225"
     CDS             <1..1644
                     /locus_tag="VNY79_13225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HWX73455.1"
                     /translation="SREGDFWRWDGFAVAAHAPTGAARRLAERGRLQTIATELETARG
                     EVESQRRAVEAAVAALAAAAEAETRARARWREAQHSTDTAREAHAAAEREISRNAARM
                     SALKEAQQRIAADRAEATVAHGEAARALAALASPAEIEAKLAAVNALIARDRSVLAEV
                     RVEAQAIARDAELAGRRFQAIACERQAWNERKDSAAAQIAIIGRRTEEATAERSELAD
                     APQRFAAQRQALIGEIETATGERRAAADRLAMAETELAEADKAARAALEAVGEARAQA
                     ARAEERCGAARRRLADVEHEIREAFDVEPAAAAELAEIKAGAELLSIAEAEEKLDRIR
                     RERERLGAVNLRAEEELHEVEAQHAKLTSERDDLVEAIRRLRQGIHSLNQEARERLLV
                     SFATVNENFKKLFTELFGGGTAELQLIESEDPLEAGLEIMAKPPGKKTVTLSLLSGGE
                     QALTALALIFAVFLTNPAPICVLDEVDAPLDDYNVERFCDLLDEMTRSTETRFVIITH
                     NPITMARMNRLYGVTMAERGVSQLVSVDLEGAVKLREAS"
     gene            2010..>2796
                     /locus_tag="VNY79_13230"
     CDS             2010..>2796
                     /locus_tag="VNY79_13230"
                     /inference="COORDINATES: protein motif:HMM:NF025104.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73456.1"
                     /translation="MNTHPSYTLGARPETGRTLRAWAVLSHGTFSGLIFPIDVALIVA
                     MSCFTGVAYHLAAYGEPGSIPSFVQVGVLAASLFAVSNAFRGEYRLANFFAFRPHGRR
                     TVRLWNVTFVCLLVLGFLAQISVGYSRGSIVLFYIATFAGLIVLRFAIVRLTALARSA
                     GLVSAQRIFVIGTGAHVGAFVTLRAVDARRQCHRLPLSHPDRGNRLGTGAAGNARSRS
                     CRGCRRRPQPRARCDLPADALVRYRDHRALRRDVPGTPGRNSSR"
BASE COUNT          433 a         1002 c          937 g          424 t
ORIGIN      
        1 tcgcgcgaag gcgatttctg gcggtgggac gggtttgccg ttgccgccca tgcgccgacc
       61 ggggcggccc gccggctcgc cgagcgtggc cggctgcaga cgatcgcgac cgagctggaa
      121 accgcgcgcg gcgaagtcga gtcccagcgc cgtgcggtcg aggccgcggt ggccgcgctc
      181 gccgccgccg cggaagcaga gacccgggcg cgggcgcgct ggcgtgaggc ccagcactca
      241 actgataccg cgcgcgaagc gcacgctgct gcggaacgcg agatcagccg caacgcggcc
      301 cggatgtccg ccctgaagga ggcgcaacag cggatcgccg ccgatcgcgc cgaagcaacg
      361 gtggcccacg gtgaagcggc gcgggcactt gccgcgctcg cctcccccgc cgagatcgaa
      421 gccaagctcg ccgcagtcaa cgcgctcatt gcgcgcgacc gcagcgtgct cgccgaggtc
      481 cgggtcgagg cgcaggcgat cgcgcgcgac gccgagttgg ccggccgccg cttccaggcc
      541 atcgcctgcg agcgtcaagc ctggaacgag cgcaaggaca gcgccgcggc gcagatcgcc
      601 atcatcgggc ggcgcaccga ggaagccacc gccgagcgca gcgaacttgc cgatgcgccg
      661 caaaggttcg ccgcgcagcg ccaggcgctc atcggcgaga tcgagacggc gacgggcgag
      721 cgccgcgccg ctgccgaccg gctggcgatg gccgagaccg agcttgcgga agccgacaag
      781 gcggcacggg cggcgctcga ggccgtcggt gaggctcgcg cccaagcggc gcgcgccgaa
      841 gagcgctgcg gcgcggcgag acgccgtctc gccgacgtcg aacacgaaat ccgcgaggct
      901 ttcgatgtcg aacccgcggc cgcggcggaa ctcgcggaga tcaaggcggg cgcggaactg
      961 ctgtcgatcg ccgaggccga ggaaaaactc gaccgcatcc gccgcgagcg cgagcggctc
     1021 ggcgccgtca atctgcgggc tgaggaagaa ttgcacgagg tcgaggcaca gcacgccaag
     1081 ctcaccagcg aacgcgatga ccttgtcgaa gcgatccggc ggctgcggca gggcatccat
     1141 agcctcaacc aggaggcgcg cgagcggctg ctcgtttcct tcgccaccgt caacgagaac
     1201 ttcaagaagc tgttcaccga gctgttcggc ggcggcaccg ccgagttgca gctcatcgag
     1261 agcgaggacc cgcttgaggc cggccttgaa atcatggcga agcctccggg caagaagacg
     1321 gtgacgctgt cgctcctctc gggcggcgag caggcgctga ccgcactcgc gctcattttc
     1381 gcggtgtttc tcaccaatcc ggcgccgatt tgcgtgctcg acgaagtcga cgctccgctc
     1441 gacgactaca acgtcgagcg cttctgcgat ctgctcgacg agatgacgcg ctcgaccgaa
     1501 acgcgcttcg tcatcatcac ccacaacccg atcaccatgg cgcgcatgaa ccgcctctac
     1561 ggcgtcacca tggccgagcg cggcgtctcc cagctggtct cggtggatct cgaaggcgcc
     1621 gtgaagctgc gcgaggcgag ctgacggcct ccttcgcgag gccgccctgt tcggtgcggc
     1681 aggcgggacg acagccggac ggacgtccgc gacatcattc gcagcagcgc gacgcgacgg
     1741 cgtgcttcgc cgaaacttcc gcgacattcc gctcggcggc attgactgat tgccgcccgc
     1801 aagcggccaa ggtctttcca ccgccgtctt ccgcgagtac cggcgcagca cgctgaagct
     1861 caccgccgtg ggccgccccg cctacttcac cgagcgacgg cgttcattgg cacgattctc
     1921 gcgacgcatc gctttgcacc cgggcgctgt gccgtttcgg cacagcgcct ccacgtgttt
     1981 cgccaagccg gcgagagcca agcgccaaca tgaacacgca cccaagctac acgctgggag
     2041 cccggccgga gactggccgg acgctgcgtg cctgggcggt gctttcgcac ggcaccttct
     2101 ccggcctgat ctttcccatc gacgtggcgc tgatcgtggc gatgtcgtgc ttcaccggcg
     2161 tcgcttatca cctcgccgcc tatggcgagc cgggcagcat cccctccttc gtgcaggtcg
     2221 gcgtgctggc ggcgagcctc ttcgccgtct ccaacgcctt ccgcggcgaa taccggctgg
     2281 cgaatttctt tgccttccgg ccgcacggcc ggcgcacggt ccgcttgtgg aacgtgacct
     2341 tcgtctgcct gctcgtgctc ggcttcctgg cgcagatcag cgtcggctat tcgcgcggct
     2401 cgatcgtgct gttctacatc gcgacgtttg ccggactgat cgtgctgcgc ttcgcgatcg
     2461 tgcgcctgac ggcgctcgcg cgctcggccg gcctcgtctc cgcgcagcgc atcttcgtca
     2521 tcggcaccgg cgcccatgtc ggcgccttcg tcacgctacg agccgtggac gctcggcgcc
     2581 agtgtcatcg gctgccgctt tctcaccccg atcgcggcaa ccgcctcggc acaggagcgg
     2641 cgggcaacgc tcgatcgcga tcttgccgag gctgtcgccg gcgtccgcag cctcgagccc
     2701 gatgcgatct tcctgctgat gccctggtcc gctaccgaga tcatcgagcg ctgcgccgag
     2761 acgttcctgg cactcccggt cgaaattcat ctcggg
//
LOCUS       DATMQB010000456         9430 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2115231, whole genome shotgun sequence.
ACCESSION   DATMQB010000456 DATMQB010000000
VERSION     DATMQB010000456.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9430)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9430)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9430
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2115231"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..930
                     /locus_tag="VNY79_13235"
     CDS             <1..930
                     /locus_tag="VNY79_13235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012042263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="urate hydroxylase PuuD"
                     /protein_id="HWX73457.1"
                     /translation="SGFALLVLVYYLGADLFLIDKSVLDLTATQAAVIAFLSLAVSWL
                     AYEGLCRSPLGRHEVALALVGYVFLVALTFAFTRVFSGRGAYTQIGALIGTIMVANVF
                     VIIIPYQKKSVAALLAGKEPDPFWGQIGKQRSVHNNYLTLPVVFLMLSNHWPLFFATR
                     YNWLIVAIVLAIGPVIRHFYNSRHEGKGNPWWTWGVAAAGMAAIAWLSAAGPGATVTG
                     ALPTTPKFAEVANIVLSRCSMCHAAEPVWTGIAAAPKGVMLDTDEHIRVHAPLIEIVA
                     VRSNAMPPGNVTEMTDHERLVLASWLAAGAAAQ"
     gene            927..2285
                     /gene="guaD"
                     /locus_tag="VNY79_13240"
     CDS             927..2285
                     /gene="guaD"
                     /locus_tag="VNY79_13240"
                     /EC_number="3.5.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014131391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008892 - guanine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0006147 - guanine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="guanine deaminase"
                     /protein_id="HWX73458.1"
                     /translation="MNEAERNVRAIRGRLLSFLRAPHGAGDAQSYRYIEDGIVLIKDG
                     RIEAAGPAAELMPRLPAAAAVEHHADALILPGFVDPHIHYPQTQVIASYGAQLLEWLE
                     KYTFVEEQKFADPAHAARNAEFFLDELARNGTTTALAYCTAHPNSAAALFAAAHRRNA
                     GMIAGNSLMDRNAPPGLLAPAATAIADSRDLIRRWHGTGRQRYAVTPRFAITSSDEQL
                     AAAGALLNEFPTVLMQTHLAENCDEIDTVRRLFPRDASYTAVYARFGLLGPRSLFGHC
                     IHLDDAELALLRDSRSVAVFCPTSNLFIGSGLFDYARLAAAGIRIALATDVGGGTSYS
                     MLRTAAEAYKVMQVQGQNLPALIAFDLITRGNAAALGLAGEIGTITPGAFADLVVLDA
                     RATPAMAHRMAVARDLEAELFVLTTLGDDRAVRQTYIAGEPALRPKPQDDRAISRAGG
                     ST"
     gene            2286..3302
                     /locus_tag="VNY79_13245"
     CDS             2286..3302
                     /locus_tag="VNY79_13245"
                     /EC_number="3.5.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008970403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000034 - adenine deaminase activity
                     [Evidence IEA];
                     GO_process: GO:0006146 - adenine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenosine deaminase"
                     /protein_id="HWX73459.1"
                     /translation="MHDMDSLIRRLPKCELHIHIEGSLEPELMFALARRNGIRLPYAS
                     VEALRQAYQFRHLQDFLDIYYQGMSVLVTEQDFYDLAWAYLQRARDDNVRHVEMFFDP
                     QGHTARGIAFSTVIGGLHRAVVDAARELGVGASLIMCFLRHLDETDAEKTLDRALAFK
                     DKIVGVGLDSSELGNPPSKFARVFRRARDEGFFLTAHAGEEGPAAYVWEALDVLGVGR
                     IDHGNHSLDDAALVGRLARERIALTVCPLSNLRLRVIDDLSRHPLRQMMDKGLLVTVN
                     SDDPAYFGGYVNENYRAVSRALELRRDEIAATVRNGIEASLMATAAKADALAEVERVL
                     AETA"
     gene            complement(3322..4302)
                     /gene="xdhC"
                     /locus_tag="VNY79_13250"
     CDS             complement(3322..4302)
                     /gene="xdhC"
                     /locus_tag="VNY79_13250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009493910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0009115 - xanthine catabolic process
                     [Evidence IEA];
                     GO_process: GO:0065003 - protein-containing complex
                     assembly [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase accessory protein XdhC"
                     /protein_id="HWX73460.1"
                     /translation="MAKVWTRIRQTIERHGSAAMLSVIDAAGSVPRESGARIVLQPDG
                     GFFGTIGGGRLEYEAVARARATLAAGRGAAQFRDWPLGPNLGQCCGGMVRTLTETFDA
                     ADLAAVRRFEEMEQSGAFATASRLDANGRIVRVLASRAAAETGRTAFSRTSFHERFGE
                     ATTPVLLFGAGHVGRAVVLALAPLPFTVRWIDGRQDQFPRHVPQNAVALCTDDPTHEL
                     AQAPRDAMVIVMTHSHPLDFDITAAALQRDAFDFVGLIGSETKRARFASWARQVGVAE
                     SRIDWLVCPIGMPQIRGKEPAVIAAGIAAQLLMARERASAPLVSPATQPA"
     gene            complement(4314..6665)
                     /gene="xdhB"
                     /locus_tag="VNY79_13255"
     CDS             complement(4314..6665)
                     /gene="xdhB"
                     /locus_tag="VNY79_13255"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006934407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004854 - xanthine dehydrogenase activity
                     [Evidence IEA];
                     GO_function: GO:0043546 - molybdopterin cofactor binding
                     [Evidence IEA];
                     GO_process: GO:0009115 - xanthine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase molybdopterin binding
                     subunit"
                     /protein_id="HWX73461.1"
                     /translation="MPPDSPASETPLRHVHKALPHDSAAKHVQGAAEYIDDIPEPAGT
                     LHVAVGGSPVARGTIRGLDLAEVQKEPGVVAVVTAADIPGKNDVAPAFADEPVFAVDR
                     VIFHGQPVFAVVAASRDAARRAALRAHFNIEAERPNVSVEQGKASGERVLPDYAFIHG
                     DAAKAIAAAPFHSSGTLHIGGQEHFYLEGQVALAVPGEDGAMLVYSSTQHPSEVQHVV
                     ARVLALPDSFVTCSVRRMGGGFGGKETQATQWAVIAALAARATGRPCKLRLDRDADMV
                     VTGKRHDFAVAYGVGFEADGRMRAVDIELDARCGCSADLSLGVVDRAMFHADNAYFLP
                     EFRIHSRRIKTDTVSNTAFRGFGGPQGMMAIERAIDAIAWSRGLDPLDVRKANLYAAA
                     RDVTPYGQTVEDHDVAPRLIEQLERSSSYRARRKEITAFNARSPILKRGIALTPVKFG
                     ISFTLTHLNQAGALVHVYQDGSVHLNHGGTEMGQGLFQKVAQVAAEEFGIGLERVHIT
                     ATSTDKVPNTSATAASAGTDLNGMAVQQAVREIKARLARFAAESWNVEEDRISFRDDR
                     VFIGNESIPFGELTKKAFAARVHLSAAGFYKTPKLHWDREKAKGRPFFYYAYGAACSE
                     VVIDILTGEMSVRRVDILHDVGRSINPAIDIGQIEGAFVQGMGWLTTEELVYDEEGRL
                     LTHAPSTYKIPVAADVPADFRVALFDGSNREETIYRSKAVGEPPLMLAISVFAATADA
                     IHSLHPGKPVALDAPATPEAILKAVGPVDPVAALALLAARAHA"
     gene            complement(6652..8133)
                     /gene="xdhA"
                     /locus_tag="VNY79_13260"
     CDS             complement(6652..8133)
                     /gene="xdhA"
                     /locus_tag="VNY79_13260"
                     /EC_number="1.17.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014285740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004854 - xanthine dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0009115 - xanthine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine dehydrogenase small subunit"
                     /protein_id="HWX73462.1"
                     /translation="MTRDCLQFLRSGRVVRLNEFLPRTTVLDWLRESERSIGTKEGCA
                     EGDCGACATVVVREHGGRLVYVPVNSCITLLGQLDGAELITVEDLADDGELHPVQAAM
                     ARQHGSQCGFCTPGIVMSLFAHYHACNGATTREAINNVLAGNLCRCTGYRPIVDAALE
                     ACAEAADDRFIRSATARLQALRSLDDKADLFVGNDGSFFAAPVSEQSLAQLYARHPDA
                     TIVAGATDVGLWITKKLAPIEKVIHVGRVAGLSSIEATSEGYAIGAAVSLARAAPMLG
                     SIDPDVAEVLRRFGSIQVRACGTVGGNIANGSPIGDLAPMLIAMGASVELRREERVRT
                     LPLESFFLDYGKQDRQPGEFVRRLFVPKLAPGTHFRAYKISKRIDEDISAVLAAFCLK
                     IDAGRISEAKVAFGGMAGIPKRAQAVEAALRGLPLAAMLRWHEASDAVGVDFTALTDL
                     RASAAYRLRVARNLVIKALAEIAGAESDTTRIAGRRMIADAAG"
     gene            complement(8211..8612)
                     /locus_tag="VNY79_13265"
     CDS             complement(8211..8612)
                     /locus_tag="VNY79_13265"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018240220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HWX73463.1"
                     /translation="MPNIQMLNPENLGKPIAPYSNVARVKASEFLFIAGQVGTDKDGK
                     TPADFEGQCAAVFANIGAALASQGASFANVVEFTSYLVHSQDIAKYFRYRTREFPRLF
                     AGGAYPPNTLLIVDRLVREEFLLEVAAVAAL"
     gene            8859..>9430
                     /locus_tag="VNY79_13270"
     CDS             8859..>9430
                     /locus_tag="VNY79_13270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018234583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73464.1"
                     /translation="MKSILRYSAYIVVAAALLAQPAWAWHRQQDWNDGWHQPRHHLRY
                     QPGHYVWHQPRHHVWHQARHHLRSQPQHYVWYQAQRRVGYQPRQQEWYQLQQNVWYPP
                     GWYQPQRQVSYLPRRHVSDHLRHDQHYAWSHRRPSHHQAEHAAAGPGRHAGLDDLIAK
                     HAAANNLPLALVHRVVKRESDYNPRCIYAG"
BASE COUNT         1555 a         3164 c         3073 g         1638 t
ORIGIN      
        1 tcggggttcg cgctgctggt gctcgtctac tatctcggcg ccgatctgtt cctgatcgac
       61 aagtcggtgc tcgatctcac cgcgacgcag gcggcggtca tcgcctttct gagcctcgcg
      121 gtttcctggc tcgcctacga gggactctgc cgctcgccgc tcggccggca cgaggtcgcg
      181 ctggcgctcg tcggctatgt gtttctcgtc gcgctgacct tcgccttcac gcgcgtgttc
      241 agcggacgcg gcgcctacac ccagatcggc gcgctgatcg gcaccatcat ggtggccaac
      301 gtcttcgtca tcatcattcc ctaccagaag aaatccgtcg ccgcgcttct tgccggcaag
      361 gagcccgatc cgttctgggg ccagatcggc aagcagcgct cggtccataa caattatctg
      421 acgctgccgg tcgtcttcct tatgctcagc aaccattggc cgctgttctt tgccactcgc
      481 tacaactggc tgatcgtcgc catcgtgctc gccatcgggc cggtcatccg ccatttctac
      541 aattcgcgcc acgagggcaa gggcaatccg tggtggacgt ggggcgtggc ggccgccggc
      601 atggcggcga ttgcctggct ctccgccgcc gggcccggcg cgactgtgac cggcgccttg
      661 ccgacgaccc cgaaattcgc cgaggtcgcc aacatcgtgc tgtcccgctg cagcatgtgt
      721 cacgccgccg agccggtgtg gaccggcatc gccgccgcgc ccaagggcgt gatgctcgat
      781 accgacgagc acatccgcgt gcatgcgccg ctgatcgaga tcgtcgccgt gcgctcgaac
      841 gccatgcccc cgggcaatgt gaccgagatg acggatcacg agcggctggt cctggcgtcg
      901 tggcttgccg ccggcgcggc ggcgcagtga acgaggccga gcgcaacgtg cgcgccattc
      961 gcgggcggct tctgagcttt ttgcgcgcgc cgcacggcgc cggcgatgcg caaagctatc
     1021 gctacatcga agacggtatt gtgctcatca aggacggccg catcgaggcg gccggacccg
     1081 ctgccgagct gatgccgcgg ctcccggcgg cagcggcggt cgaacatcac gccgacgcgc
     1141 tgattttgcc cggcttcgtc gacccccata tccactatcc gcagacgcag gtgatcgcgt
     1201 cctatggcgc gcaactgctc gaatggttgg agaaatacac cttcgtcgaa gagcagaaat
     1261 tcgccgatcc cgcgcacgcc gcgcgcaacg ctgaattttt cttggacgag ctggcgcgca
     1321 acggcacgac cactgcgctt gcctactgca cggcgcatcc gaattcggcc gccgcgctgt
     1381 ttgcggccgc gcaccgccgc aacgccggca tgatcgcggg caattccctc atggaccgca
     1441 acgcgccgcc gggcctgctc gctcccgccg caacggccat cgccgacagc cgcgatctca
     1501 tccggcgctg gcacggcacc gggcggcagc gctatgccgt gaccccgcgc ttcgccatca
     1561 cctcgagcga cgaacagctc gcggcggcgg gcgccctgct gaatgagttc cccaccgtcc
     1621 tgatgcagac gcatctcgcc gagaactgcg acgagatcga cacggtcagg cgcctgtttc
     1681 cgcgcgacgc aagctacacg gcggtctatg cccggttcgg cctgctcggc ccgcgctcgc
     1741 ttttcgggca ttgcatccat cttgacgatg ccgagctggc gctgctgcgc gacagccgtt
     1801 cggtcgcggt gttctgcccg acctccaatc tcttcatcgg cagcggcctg ttcgactatg
     1861 cgcggctcgc cgccgcgggc attcgcattg cgctcgcgac cgatgtcggc ggcggcacgt
     1921 cctattccat gctgcgcacc gccgccgagg cctacaaggt gatgcaggtg cagggccaga
     1981 acctgccggc actcatcgca ttcgatctga tcacgcgcgg caatgccgcc gcgctcggcc
     2041 ttgccggcga gatcggcacg atcacgcccg gcgccttcgc cgatctcgtt gtgctcgatg
     2101 cgcgggcgac gccggcaatg gcgcaccgca tggcggtcgc gcgcgacctt gaagccgagc
     2161 tgttcgtgct tacgaccctg ggcgacgacc gcgcggtccg ccagacctac atcgccggcg
     2221 agcccgcgct caggccgaag ccgcaggacg accgcgctat ttcacgcgcg ggaggaagta
     2281 cctagatgca cgacatggat tcgttgatca gacggctgcc gaaatgcgag ctgcacattc
     2341 acatcgaggg cagcctcgag ccggaattga tgttcgccct ggcgcgccgc aatggcatcc
     2401 ggctgcccta tgcgtcggtc gaggcgctac gccaagcgta tcaatttcgc cacctgcagg
     2461 atttcctcga catctactat caaggcatgt cggtgctggt caccgagcag gacttctacg
     2521 atctcgcctg ggcttatctg cagcgcgccc gcgacgacaa tgtcaggcat gtcgagatgt
     2581 tcttcgaccc gcaaggacat accgcgcggg gcattgcatt ctccacggtg atcggcggcc
     2641 tgcaccgcgc cgtcgtcgat gcggctcgtg agcttggcgt cggcgccagc ctgatcatgt
     2701 gctttttgcg gcatctcgac gaaacggatg cggagaagac gctcgatcgc gctctggcct
     2761 tcaaggacaa gatcgtggga gtgggactgg attcatccga gctcggcaat ccgccgagca
     2821 agtttgcccg ggtgttcaga cgcgctcgcg atgaaggttt ctttctcacc gcgcatgccg
     2881 gcgaggaagg accggcagcc tatgtctggg aggccctcga cgtcctcggc gttggccgca
     2941 tcgatcacgg gaatcattcg ctcgatgatg cagcgctggt cgggcggctg gcgcgcgagc
     3001 gaatagcgct caccgtgtgt ccgctctcca atctgcgctt gcgggtcatc gacgatctca
     3061 gccgccaccc gctgcggcaa atgatggaca agggccttct cgtcaccgtc aattccgacg
     3121 atccggctta cttcggcggt tacgtgaacg agaactaccg cgccgtgtcg cgcgcgctcg
     3181 agctccgacg cgacgagatt gcagcgactg tccgcaacgg catcgaggct tcgctcatgg
     3241 cgacggcagc gaaggccgat gctctcgccg aggtcgagcg cgtgctcgcc gaaacagcct
     3301 gatgatgcct cgccggcgcg ctcacgccgg ctgcgttgcc gggctgacca gcggtgcgga
     3361 cgcccgctcc ctggccatga ggagctgagc ggcgatcccc gcggcaatca cggcgggttc
     3421 cttgcctctg atctgcggca tgccgatcgg acagaccagc cagtcgatcc tgctttcggc
     3481 gacgcccact tgccgggccc agctcgcgaa ccgcgcccgc ttggtctccg agccgatcag
     3541 gccgacgaaa tcgaacgcgt cacgctgcag cgccgcggcg gtgatgtcga agtcgagcgg
     3601 atgcgaatgg gtcatgacga tgaccatggc gtcgcgcggt gcctgtgcaa gttcgtgagt
     3661 tgggtcgtcg gtgcaaaggg cgacggcatt ttgcggcacg tggcggggaa actggtcctg
     3721 ccgaccgtcg atccagcgga ccgtaaaggg aagcggcgcc agcgccagca cgacggcccg
     3781 gccgacgtgg ccggcgccaa acagcagcac cggcgtggtc gcctcgccga accgttcgtg
     3841 gaacgacgtc ctggagaagg cggtccgccc ggtttctgcc gccgcgcggg atgccagcac
     3901 ccgtacgatc cgtccattcg catcgagccg gctcgcggtc gcaaaagctc ccgactgctc
     3961 catctcctcg aagcgccgta ccgcggcgag gtcggcggcg tcgaatgtct cggtgagcgt
     4021 gcgcaccatg ccgccgcagc attggccgag attgggaccc aacggccagt cgcggaactg
     4081 cgccgcgccg cgcccggcgg caagcgtggc gcgcgcccgc gccacggctt cgtactcaag
     4141 gcgcccgccg ccgatagtgc cgaaaaagcc gccgtcgggc tgcagcacga tgcgggcgcc
     4201 gctctcgcgc ggcactgatc cggcggcgtc gatcacgctc agcatcgcgg cgctgccgtg
     4261 ccgctcgatg gtttgccgaa tgcgcgtcca gaccttggcc atctcattcg tatctaggcg
     4321 tgggctctcg ccgcgagcag cgccagtgca gcgaccgggt cgaccgggcc gaccgccttg
     4381 aggatcgctt ccggggttgc gggagcatcc agtgcgaccg gtttccccgg atgcagtgaa
     4441 tgtatcgcat cggcggttgc ggcgaacacg gaaatcgcca gcatcagcgg cggctcgccc
     4501 accgctttcg agcgatagat cgtctcctcg cgattgctgc cgtcgaacaa cgccacgcgg
     4561 aagtccgccg gcacgtcggc ggcaaccggt atcttgtagg tcgagggcgc atgcgtgagc
     4621 aggcggcctt cctcatcgta gaccagttcc tcggtcgtca gccaccccat gccctggacg
     4681 aacgcgcctt cgatctggcc gatatcgatc gcagggttaa tggagcgtcc gacatcgtga
     4741 agaatatcga cgcggcggac gctcatctcg ccggtcagaa tgtcgatcac gacttcgctg
     4801 caggcggcgc cgtaggcgta atagaagaac ggccggcctt tcgctttctc gcgatcccaa
     4861 tgcagcttcg gcgtcttgta gaagccggcg gctgacaaat gcacgcgcgc tgcaaacgcc
     4921 ttcttcgtca attccccgaa cggaatgctc tcgttgccga tgaacacgcg gtcgtcgcgg
     4981 aaggagatgc gatcctcctc gacgttccag ctctccgcgg caaagcgggc cagccgcgct
     5041 tttatttcgc gcaccgcctg ctgcacggcc atgccgttga ggtcggtgcc ggccgacgca
     5101 gcggttgccg aggtgttggg taccttgtcg gtcgaggtgg cggtgatgtg cacgcgctcg
     5161 agcccgatgc cgaactcttc cgccgcgacc tgcgccacct tctgaaacag gccctggccc
     5221 atttccgtgc cgccgtgatt gaggtggacc gagccgtcct gatagacgtg caccagggcg
     5281 ccggcctggt tgagatgcgt cagcgtgaag gaaatgccga actttacggg agtaagtgca
     5341 atcccccgtt tcaggatcgg cgagcgcgcg ttgaacgccg tgatctcctt tcgccgggcg
     5401 cgatagctcg atgaacgttc gagctgctcg atgagccgcg gcgccacatc gtggtcttcg
     5461 accgtctggc cgtaaggggt gacgtcgcgt gcagcggcgt acagattggc cttgcgcacg
     5521 tcgagcggat cgaggccgcg actccaggcg atcgcgtcga tcgcgcgctc gatcgccatc
     5581 atcccctgcg gaccgccgaa cccgcggaac gccgtgttcg acacggtatc ggtcttgatg
     5641 cgccgcgaat gaatcctgaa ttcgggaagg aagtaggcgt tgtcggcatg gaacatggcc
     5701 cggtcgacca cgccgaggct cagatcggcc gaacatccgc agcgggcgtc aagctcgatg
     5761 tccaccgccc gcatgcgccc gtcggcttcg aagccgacgc cgtacgcaac ggcgaagtcg
     5821 tggcgcttgc cggtcacgac catgtcggca tcgcggtcga gccggagctt gcagggccgg
     5881 ccggtggcgc gggcggcgag agcggcgatg accgcccact gcgtcgcctg cgtctccttg
     5941 ccgccgaagc cgccgcccat gcggcgcacg ctgcaggtca cgaaggaatc cggcagcgcg
     6001 agaacgcggg cgacgacgtg ctgcacttcg ctcggatgct gagtggacga gtagaccagc
     6061 atggcgccgt cctcgcccgg cacggcgagc gcgacctggc cttccagata aaagtgttcc
     6121 tgcccgccaa tgtggagcgt accggaactg tgaaacgggg ctgccgcgat tgctttggcg
     6181 gcatcgccgt ggatgaaggc gtaatcggga agaacgcgct cgccggacgc tttgccctgc
     6241 tcgacggaga cgttggggcg ctccgcttcg atattgaaat gcgcccgcag ggccgcgcgc
     6301 cgcgccgcat cgcgcgaggc cgcaaccacg gcgaacacgg gctggccatg gaaaatgaca
     6361 cgatccaccg caaacaccgg ctcatcggca aacgccggcg caacgtcgtt cttgcccggt
     6421 atgtccgccg ccgtgacgac cgcgacgacg cccggctcct tttgcacctc ggcaagatcg
     6481 aggccgcgga tggtcccgcg cgcgaccggc gaaccgccga cggcgacgtg caaggtgccc
     6541 gccggctcgg gaatgtcgtc gatgtattcg gcggcgccct gcacgtgctt ggcggcgctg
     6601 tcgtgcggca gcgccttgtg gacgtggcgg agcggcgtct ccgatgcggg gctatccggc
     6661 ggcatcggcg atcatccggc gtcccgcgat gcgcgtcgtg tcgctttccg caccggcaat
     6721 ctcggccagc gccttgatga ccagattgcg ggcgacgcgc aggcgatagg cggcgctggc
     6781 gcgcagatcg gtgagtgcgg tgaaatccac gccgacggca tcggacgctt catgccaacg
     6841 cagcattgcg gcaagcggga gcccgcgcag cgccgcttcg acggcctgcg cgcgcttcgg
     6901 aattcccgcc atgccgccga aggcaacctt cgcttcgctg atccggccgg cgtcgatctt
     6961 caggcagaat gcggcgagca ccgcagaaat atcttcgtcg atgcgcttgc tgatcttgta
     7021 ggcgcgaaaa tgagtgcccg gagcgagctt cggcacgaag agccggcgca cgaactcgcc
     7081 cggctggcgg tcctgtttgc cgtagtcgag gaagaagctt tccagcggca aggtgcgaac
     7141 ccgctcctcg cgacgcaact ccaccgaagc tcccattgca atcagcatcg gcgcgagatc
     7201 gccgattggc gagccgttgg cgatattgcc gccgaccgtg ccgcaggcgc gcacctggat
     7261 cgagccgaac cgccgcaaca cttcggcgac atcgggatcg atcgatccca acatcggcgc
     7321 ggcgcgcgcc agtgaaacgg ccgcgccgat cgcatagccc tcgcttgtcg cttcgatcga
     7381 agaaaggcca gcgacacggc cgacatggat gaccttctcg atcggggcga gcttcttggt
     7441 gatccacagg ccgacatcgg tcgcaccggc gacgatcgtc gcatcgggat gtcgcgcgta
     7501 gagttgcgcc agggactgct cgctcaccgg tgcggcaaaa aaggagccat cattcccgac
     7561 gaaaagatcg gccttgtcgt cgagcgaacg gagcgcctgc agccgcgcgg tggcgctccg
     7621 gatgaaccga tcgtcggccg cctcggcgca ggcttccaag gcggcatcga cgatcggccg
     7681 gtatcccgtg catcggcaca ggtttccggc gagcacattg ttgattgctt cgcgggtcgt
     7741 cgcgccgttg caggcatggt agtgggcgaa caggctcatc acgatgcccg gcgtgcaaaa
     7801 gccgcattgc gagccgtgct gtcgggccat cgccgcctgg accggatgca gctcgccgtc
     7861 atcggcgagg tcttcgacgg tgatcagctc cgcgccatca agctggccga gcagcgtgat
     7921 gcacgaattg accggcacat agaccaggcg gccgccatgc tcgcgcacga ccacagtagc
     7981 gcaggccccg cagtcgcctt cggcgcagcc ttccttggtg ccgatcgaac gttcgctctc
     8041 gcgcagccag tcgaggaccg tcgtgcgcgg caaaaattcg ttgaggcgca cgacgcggcc
     8101 gcttctgaga aactgcaaac agtctctggt catctgcctg ctgcgaactg acaatagtgg
     8161 cccgcggaag ggaatgcaat tttgcgtgct cacgccgcgc gccccctccg ctacagcgcg
     8221 gcgacggcgg cgacctcgag caaaaactcc tcgcgcacca ggcggtcgac gatcagcagc
     8281 gtgttgggcg gataagcgcc gccggcaaac aagcgcggga attcgcgcgt gcggtatcgg
     8341 aagtacttgg cgatgtcctg cgaatgcacc aggtagctcg tgaattcgac gacgttggcg
     8401 aagcttgcgc cctgcgaagc gagcgcggcc ccgatgttgg cgaataccgc cgcgcattgc
     8461 ccttcgaaat cggcgggcgt cttgccgtcc ttgtccgtcc cgacctggcc ggcgatgaac
     8521 aaaaactccg aggctttgac gcgggcaacg ttcgaatagg gcgcgatcgg cttgccgaga
     8581 ttctccgggt tgagcatctg gatattgggc atggaaggcc tccgtggcgg ttgggggggt
     8641 ggctggggac aaggtctggg cggctgcatt tttgcggcga ccgtggcttc cgcgcaacgg
     8701 tatcggggac gacaaggggg taccctgggc acccggcgcg gtggctcatc ggccgcgacg
     8761 ttgcgtctgt tgcttggctc cgaggtgccc tgggcgtttg gcggccgcca taatcggccg
     8821 catgcgcgcc gagggcaaga agggggaggg aacccgcaat gaaatcgatc ctgcgctatt
     8881 cggcctatat cgtggtcgct gccgccctgc tggcgcagcc ggcttgggca tggcatcggc
     8941 aacaggactg gaacgatggc tggcatcagc cccggcacca tctccggtat cagccggggc
     9001 actatgtctg gcatcaaccc cggcaccatg tgtggcatca ggcccggcat catctccggt
     9061 cccagccgca gcactatgtg tggtatcagg cccagcgccg tgttggctat caaccccggc
     9121 agcaagagtg gtatcaactc cagcagaatg tctggtaccc gcccgggtgg tatcagcccc
     9181 agcggcaagt ctcgtacctg ccccggcgcc atgtctctga tcatctccgg catgaccagc
     9241 attacgcttg gtctcatcgc cggccttctc accaccaggc ggagcacgcc gccgccgggc
     9301 ccggccgcca cgccggtctc gacgacttga tcgccaagca tgccgccgcc aataatctgc
     9361 cgcttgcgct cgtgcatcgc gtcgtcaagc gcgagagcga ctacaatccg cgctgtatct
     9421 atgccggcaa
//
LOCUS       DATMQB010000457         8189 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4569519, whole genome shotgun sequence.
ACCESSION   DATMQB010000457 DATMQB010000000
VERSION     DATMQB010000457.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8189)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8189)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8189
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4569519"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1886
                     /locus_tag="VNY79_13275"
     CDS             <1..1886
                     /locus_tag="VNY79_13275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PAS-domain containing protein"
                     /protein_id="HWX73465.1"
                     /translation="KRELLELAGRHEALLTEVASLRALVERLPSPVWMRDAAGRLAFV
                     NAAYAQAVEARNAVDAVERSLELLDSAARENIARSRAAGGAYAGRLPAIVAGTRRSFD
                     VLDFRTETGSAGLGIDATEAETMRSAVARMVDAHRRTLDQLSTGVAMFDTDHKLSFYN
                     AAYRALWDLDAGYLDQAPTDSAVLERLRTARKLPEEQDFRQWKAELQEAYRAIEPKEH
                     TWHLPDGRTLRVVSTPNPDGGVTYLFDDVTERLDLERRFEELIRVQGETLDNLTEGVA
                     VFASDGRLRLSNPSFARMWRLPPPVLAERPHIEMITDLCRPLHGDDPTWQALRRVVTA
                     IGSREAISGRLERRDGSVVDCTTVPLPDGATLVTFHDVTDSVNVERALRERNEALEDA
                     DRIKIDFVHHVSYELRSPLTNIIGFVHLLGEPSTGPLAPKQREYLDYITVSTNTLLAL
                     INNILDLATIDAGRMQINLGPVDIRATMEAAAEGVQDRLVGAGLALDMRAPRGIGSFT
                     ADERRVRQVLFNLLANAVSFSPGGSTVTLLAERRADAVVFSVTDRGPGIPPEVLEKVF
                     DWFETHSLGSHHRGTGIGLSLVRSFVELHGGTVTITSVVGEGTTVTCTFPLGAAAKLT
                     AAE"
     gene            1898..3436
                     /gene="tsaE"
                     /locus_tag="VNY79_13280"
     CDS             1898..3436
                     /gene="tsaE"
                     /locus_tag="VNY79_13280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006400 - tRNA modification [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HWX73466.1"
                     /translation="MFPTTTGSASFTVTLRNEPATVRFAMDVGVALEPGDLVTLSGDL
                     GAGKTAFARAVIRYLAGDSSIEVPSPSFTLVQTYELPRFALVHADLYRLSGSAELAEL
                     GFDDLPEGTVVLLEWPDRAAGFLPPDRLDIAFTLAPQLGADFRNVRVVGYGRFAQRAE
                     RIGQVRTFLDEWGFGDAHRRRMQGDASTRTFERLLLDDQRTILMNAPRRADGPPVRDG
                     KPYSAIAHLAEDILPYVAVAAGLRDHGLSAPTILHADLAHGFVIMEDLGEDPIVHGDP
                     PAPIGVRYQVAVDLLASLHGQPLPAVLHVAPDLDYRLPHYDMEAFLIEAELLLDWYLP
                     SIRVTVTDRVREDFCGLWREALAPAMEEPPSWVLRDYHSPNLMWLPRREDNARIGLLD
                     FQDALMGPAAYDVASLLQDARVDVPETLEVELLSRYARFRRAEDRHFDMASFTRLYAT
                     LTVQRATKILGIFARLDRRDGKPQYLRHMPRLWAYLQRSLAHPALAPLRAWYAANVRL
                     RDGL"
     gene            3475..4188
                     /locus_tag="VNY79_13285"
     CDS             3475..4188
                     /locus_tag="VNY79_13285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016845433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase family protein"
                     /protein_id="HWX73467.1"
                     /translation="MIPKRAIVLAAGLGTRMRPYNGHIPKPLVALGGKSLIDYALDRL
                     ADAGVERAVVNVHHLADALERHLAPRTRPEIVISDERGTLLGTGGGIAKALPQLGEAP
                     FFLANSDTIWLDGVKPNLVRLAAAFDPATMDALLLLAPAADSVGYVGRGDFAMLPDGR
                     LRRRGENEVVPFVYAGAAVLSPALFADAPSGAFSLTLLFDRVGVNGRLFGLPLEGVWM
                     HVGTPEAVAAAEATLAAAR"
     gene            4304..7441
                     /gene="addB"
                     /locus_tag="VNY79_13290"
     CDS             4304..7441
                     /gene="addB"
                     /locus_tag="VNY79_13290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011500635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000724 - double-strand break repair via
                     homologous recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="double-strand break repair protein AddB"
                     /protein_id="HWX73468.1"
                     /translation="MPPRVFNIPPSVPFLPTLIDALTGGKLGFPALSDPLALAAVTLY
                     LPTRRACRLARDAFLDGLTTEAAILPRIVAIGDIDEDEIAFAEAAAGGLAAEALDLPP
                     ALGGLERRLLLTRLITEWARAPAVRGAEGIPLVAQTPTAACALADDLARLIDDMTMRE
                     VSWDALDGLVPDFLDPYWQLTLKFLQIARATWPAMLSERGAIEPAARRDALIKAEAAR
                     LAKSEAPVVAAGSTGSIPATAELIATIAHLPHGAVVLPGLDTDLDADAWRMIAGDEAP
                     IRSRRRTGETVEGAPGHPQFALSALLARIGIERHDVVQLAKPRGRERLVSEALRPAAA
                     TQVWQQRAADLAFAADARAALATMAMIEAANAEDEALAIAVALREAVENDKTAALVTP
                     DRALARRVNAALRRWNIEAEDSGGDALAETPAGIFARLAAQAALGGLAPVALLALLKH
                     PLLRLGLRDTEPAIAALERAVLRGPRPRRGSAGLSAALEAFITQLKKFRSKEAVDLHA
                     SDPRIALTDGELAAAADLVSRLAAALKPLEGLDQARRPLSDMAGRHREVLAALSSVGR
                     SERAFAGPDGSRLAEALDELAISEAAAVLAVAPSDYVELFSAALADRVVRRPPRPGLR
                     VRILGPLEARLTQSDRVILGGLVEGAWPPESRTDAWLSRPMRKKLGLDLPERRIGLSA
                     HDFAQLLGARDVVLARAAKVAGTPTVPSRLIQRLAAIAGPQWQAVVDRGNFYLACARA
                     LDHPEKITPAPRPAPTPPRAARPARLPVTDIEHWLRDPYTIYAKRILHLTPLDEVDAA
                     PGAAERGNVIHAAIGEFTQRFASALPADAVRELIALGRTHFAEVAEFPEARALWWPRF
                     ARIARWFADWERARRLGLVAIDAEIEGEISIPLGERVFKLRARADRIERQADGRYVII
                     DYKTGSARTEKQVRTGLAPQLTLEAAILRKGGFAAVPAGGSVAELAYVLLKGAVPPGK
                     HCAIKFEDGTPDTQADHALEKLTALVTRFEDKNEPYRSLVHPMWKARYGDYDHLARVK
                     EWSATGGPEDEIVIP"
     gene            7438..>8189
                     /locus_tag="VNY79_13295"
     CDS             7438..>8189
                     /locus_tag="VNY79_13295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HWX73469.1"
                     /translation="MRSPNVIPSDVRRVQAAVSDPAVSAWVAANAGSGKTHVLAQRVI
                     NLLLAGVEPEKILCITFTKAAAANMAKRVFDTLAHWTTLDDAALDAAVLDRSGLTLGT
                     SLPGAKRALARRLFARALETPGGLKVHTIHAFCAQLLHQFPFEANVTAHFNVLDETAQ
                     VQLLEQLTLAVLLEGAAAPDGPLGRALGTAMTAGADQTFRDLMREAIGRRDAISAWLM
                     STGGVDEAIAALSGALGIAPHDTIDSVEAEFFA"
BASE COUNT         1184 a         2930 c         2772 g         1303 t
ORIGIN      
        1 tcaagcgcga gctgctggag cttgccgggc gccacgaagc gttgctcacc gaggtcgcct
       61 cgctgcgcgc gctggtcgaa cggctgccgt cgccggtgtg gatgcgcgac gcggccggac
      121 ggctcgcctt cgtcaacgcc gcctacgcgc aggcggtaga agcgcgcaat gcggtcgacg
      181 cggtggagcg cagcctggag ctgctcgaca gcgcggcgcg ggaaaacatc gcgcgctcgc
      241 gcgctgcggg cggggcctat gccggccggc tcccggcgat cgtcgccggg acacggcgca
      301 gcttcgacgt gctcgatttc cgcaccgaaa ccggcagcgc cggcctcggc attgacgcca
      361 ccgaagcgga gaccatgcgc agcgcggtcg cccgcatggt cgatgcgcac cgccgcacgc
      421 tcgatcagct ctcgaccggc gtcgccatgt tcgacaccga tcacaagctt tcgttctaca
      481 atgccgccta tcgcgcctta tgggatctcg acgccggcta tctcgaccag gcgccgaccg
      541 attcggcggt gctcgaacgg ctgcgcacgg cgcgcaagct gcccgaggag caggacttcc
      601 ggcaatggaa ggcggagctg caggaggcct atcgcgccat cgagccaaag gagcacacgt
      661 ggcacttgcc cgacggccgc accttgcgcg tcgtcagcac gcccaatccc gacggcggcg
      721 tcacctacct gttcgacgac gtgaccgagc ggctcgatct cgagcgccgc ttcgaggagc
      781 tgatccgcgt ccagggcgag acgctcgaca acctcaccga gggcgtcgcg gtgtttgcga
      841 gcgacggccg cctccggctg tccaatccct cgttcgcccg catgtggcgg ctgccgccgc
      901 cggtcctggc cgagcggccg cacatcgaga tgatcacgga tctatgccgg ccgttgcacg
      961 gcgatgaccc gacctggcag gcgctgcgcc gcgtggtgac cgcgatcggc agccgcgagg
     1021 cgatttccgg acggctcgaa cgccgcgacg gcagcgtggt cgactgcacc acagtgccgc
     1081 tgccggacgg cgccaccctg gtcacgttcc atgacgtcac cgactcggtc aacgtcgaac
     1141 gcgcgctgcg cgagcgcaac gaggcgctcg aggacgccga ccggatcaag atcgatttcg
     1201 tccatcacgt gtcctacgaa ctgcgctcgc cgctcacgaa catcatcggc ttcgttcacc
     1261 tgctcggcga gccgtcgacc ggtccgttgg cgccgaagca gcgcgaatat ctcgactaca
     1321 tcacggtctc cacgaacacg ctgctcgcgc tcatcaacaa cattctcgac ctcgccacca
     1381 tcgacgccgg gcgcatgcag atcaacctcg ggccggtcga catccgcgcc accatggagg
     1441 cggcggccga gggcgttcag gaccgcctcg tcggcgccgg ccttgccctc gacatgcgag
     1501 cgccgcgcgg catcggcagc ttcaccgccg acgagcggcg tgtgcggcag gttctcttca
     1561 acctgctcgc caacgccgtg agcttctctc ccggcggcag caccgtcacg ttgctcgccg
     1621 aacggcgggc cgatgccgtc gtgttctcgg tcaccgaccg cgggccgggt attccgcccg
     1681 aggtgctgga gaaggtgttc gactggttcg agacgcattc gcttggttcc caccatcgcg
     1741 gcaccgggat aggcctttct ctggtacgct cgttcgtcga gctgcacggc ggtacggtga
     1801 cgatcacctc cgtcgtcggg gaaggcacga ccgtgacctg cacctttccg ctcggcgcgg
     1861 ccgccaagct gacggcggcc gaatagcgga gcgcgtcatg tttccgacca ccaccggcag
     1921 cgcaagcttc acggtgacgc tgcgcaacga gccggcgacg gtgcgcttcg ccatggacgt
     1981 cggcgttgcg ctcgagccgg gcgacctcgt gaccctctcc ggcgatctcg gcgccggcaa
     2041 gactgcgttc gcccgcgctg tcatccgcta cctcgccggc gacagcagca tcgaggtgcc
     2101 gtcgccgagc ttcacgctgg tgcagaccta cgagctgccg cgtttcgcgc tcgtccacgc
     2161 cgatctctac cggctttccg gcagcgcgga gcttgccgag ctcggcttcg acgatctccc
     2221 ggaaggcacc gtggtgctcc tggaatggcc ggaccgcgcg gccggatttc tgccgcccga
     2281 caggctcgac attgccttca cgctggcgcc gcagctcggc gccgacttcc gcaatgtccg
     2341 tgtcgtcggc tatggccgct tcgcccagcg cgcggagcgc atcgggcagg tgcgcacttt
     2401 tctcgacgaa tggggtttcg gcgacgcgca tcgccggcgc atgcagggcg atgcctcgac
     2461 gcggaccttc gagcgcctcc tgctcgacga tcagcggacg attctgatga acgcgccgcg
     2521 ccgcgccgac gggccgccgg tacgcgacgg caagccctat agcgcgatcg ctcatctcgc
     2581 cgaggacatc ctgccgtacg tcgccgtcgc cgccgggctg cgcgaccacg gtctctcggc
     2641 gccgaccatc ctgcacgccg acctcgcgca cggattcgtc atcatggagg atctcggcga
     2701 ggatcccatc gtccacggcg atccgccggc gccgatcggt gtgcgctatc aggtcgccgt
     2761 cgatctcttg gcgtcgctcc acggccagcc gctgccggcg gtgctgcacg tggcgcccga
     2821 cctcgactac cgcctgccgc actacgacat ggaggcgttc ttgatcgagg ccgagctgtt
     2881 gctcgactgg tacctgccga gcatcagggt caccgtgacc gatcgagtgc gcgaagattt
     2941 ttgcgggcta tggcgcgaag cgctggcgcc ggcgatggag gagccgccga gctgggtgct
     3001 gcgcgactat cactcgccca atctgatgtg gcttccccgg cgcgaagaca atgcgcgcat
     3061 cggcctcctt gatttccagg acgcgctgat gggtccggcg gcctacgacg ttgcgtcgct
     3121 gctgcaggac gcgcgggtcg acgttccgga aacacttgaa gtcgagctgc tgagccgtta
     3181 tgcgcggttc cgccgcgccg aagaccgcca tttcgacatg gcgtcgttca cccggctcta
     3241 cgcgacattg accgtgcagc gggcgaccaa gatcctcggc atctttgccc ggctcgaccg
     3301 gcgcgacggc aagccgcaat atctgcgcca catgccgcgg ctgtgggcgt atctgcagcg
     3361 gtcgctcgcg cacccggcgc tcgctccgct gcgggcctgg tatgccgcca acgtccgcct
     3421 gcgggatggg ctataatggc gaaatcgggt gagtcgaagg gtgacggggg gacgatgata
     3481 ccgaagcggg caatcgtgct ggcggcgggg ctgggcacgc ggatgcggcc gtacaacggc
     3541 cacatcccca aaccgctggt cgcgctcggc ggcaaatcgc tgatcgacta cgcgctcgac
     3601 cggctggccg acgccggcgt cgagcgcgcg gtggtcaacg tgcaccatct cgccgacgcg
     3661 ttggagcggc atcttgcgcc gcgcacgcgc ccggagatcg tgatctccga cgagcgcggg
     3721 acgctgctcg gcaccggcgg cggtatcgcc aaggcgctgc cgcagcttgg cgaggcgccg
     3781 ttcttcctcg ccaattccga caccatttgg ctcgacggcg tgaagcccaa tctcgtgcgg
     3841 cttgctgctg cctttgatcc ggcgacgatg gacgccctgc tgctcctcgc accggcggca
     3901 gacagcgtcg gctatgtcgg ccgcggcgat ttcgccatgt tgcctgacgg ccgcttgcgg
     3961 cgacgcggcg agaacgaggt ggtgccgttc gtctatgccg gcgcggccgt gctctctccg
     4021 gcgctgttcg ccgatgcgcc gagcggcgct ttctcgctca cgctgctgtt cgaccgcgtc
     4081 ggcgtgaacg ggcgcctgtt cgggctgccg ctcgaaggcg tctggatgca cgtcgggacg
     4141 cccgaggcag tcgcggccgc ggaagcaacg ctcgccgccg cgcggtagaa tctgctacgc
     4201 aaatctggcc atatcccgcg caagccggtg gacacgtgac cgccctgtca cgggctcgcg
     4261 cgtccgcggg aaacgacgag aggttgcgag acgatccgtc catatgcccc cgcgcgtctt
     4321 caatattccg ccgtcggtgc cgtttctgcc gacgctgatc gatgctctca ccggcggcaa
     4381 gctcggcttt cccgccctga gcgatccgct cgcgctcgcc gccgtgacgc tctatctgcc
     4441 gacgcggcgc gcctgccggc tggcgcgcga cgcttttctc gacgggctta cgaccgaggc
     4501 ggcgatcctg ccgcgcattg tcgccatcgg cgacatcgac gaggacgaga tcgccttcgc
     4561 cgaggcggcc gccggcggcc ttgctgcgga agcgctggat ttgccgccgg cgctcggcgg
     4621 ccttgaacgg cggctgttgc tgacgcggct cattaccgaa tgggcgcgcg cgccggcggt
     4681 tcgcggcgcc gagggtattc cgctcgtcgc gcagacgccg acggcggcct gcgcgctcgc
     4741 cgacgacctc gcacggctca tcgacgacat gaccatgcgc gaggtgtcgt gggacgcgct
     4801 cgacggcctc gtccccgact ttctcgaccc ctactggcag ctcacgctga aatttctgca
     4861 gatcgcgcgc gcgacgtggc cggcgatgct gagcgaacgc ggagcgatcg agccagcggc
     4921 gcggcgcgac gcgctgatca aggcggaggc ggcgcgcctt gccaagagtg aagcaccggt
     4981 ggtcgccgcc ggctcgacag ggtcgatccc ggcgaccgcc gaactgatcg cgaccatcgc
     5041 tcacttgccg cacggcgctg tggtgctgcc cggcctcgat accgatctcg acgcggatgc
     5101 gtggcgcatg atcgcgggcg acgaggctcc gatccgctcg cgccggcgca ccggcgagac
     5161 cgtggaagga gcgcccggac acccccagtt cgcgctcagc gcgctccttg cgcgcatcgg
     5221 gatcgagcgc cacgacgtcg tgcagttggc aaaacctcgc ggccgcgaac ggcttgtttc
     5281 ggaggcgctg cgcccggctg cggcaacgca ggtgtggcag cagcgcgccg ccgacctcgc
     5341 attcgcagcc gacgcgcggg cggcactcgc gaccatggcg atgatcgaag cggccaatgc
     5401 cgaggacgag gcgctcgcca tcgcggtcgc gttgcgcgag gcggtggaga acgacaagac
     5461 cgcggcgctg gtcacgccgg accgggcgct cgcccggcgc gtcaacgccg cgctgcggcg
     5521 ctggaacatc gaggctgagg attccggcgg cgatgcgctc gccgagacgc cggccgggat
     5581 tttcgcccgg ctggcggcgc aagccgcgct cggcggtctc gctccggtgg cgctgctcgc
     5641 cttgctcaaa cacccgctgt tgcggctcgg cctgcgtgac acggagccgg cgatcgctgc
     5701 gctcgagcgc gcggtgctgc gcgggccgcg cccgcgccgc ggcagcgccg gcctttccgc
     5761 tgcgctcgaa gcgttcatca cgcagctcaa gaaattccgc agcaaggaag cggtcgacct
     5821 gcacgcttcc gatccgcgta tcgctttgac cgacggcgag cttgcggcag ccgctgatct
     5881 cgtttcccgc ctggctgcgg cgctgaagcc gctcgaaggc ctcgaccagg cgcggcggcc
     5941 cctgagcgac atggcgggcc gccaccgcga ggtgctggcg gcgttgtcgt cggtcggccg
     6001 tagcgagcgc gccttcgccg gtccggacgg cagcaggctc gccgaggcgc tcgatgagct
     6061 tgcgatcagt gaagccgccg ccgtcctcgc cgtcgcgccg tccgactacg tcgagctgtt
     6121 ttccgccgcc cttgccgacc gcgtcgtgcg gcggccgccg cggccggggc tgcgggtgcg
     6181 catcctcggg ccgctcgaag cgcggctgac gcaaagcgat cgcgtgattc tcgggggact
     6241 cgtcgaggga gcctggccgc cggaaagccg gaccgacgcc tggctcagcc gcccgatgcg
     6301 caagaaactc ggcctcgacc tgcccgagcg ccgcatcggg ctttcggctc acgattttgc
     6361 ccaactgctc ggcgcgcgcg acgtggtcct cgcccgcgcc gccaaggttg ccggcacgcc
     6421 gaccgttcca tcgcgcctca tccagcgcct cgccgcgatt gccgggccgc agtggcaggc
     6481 ggtggtcgac cgcggcaact tctacctcgc ctgcgcgcgc gcgctggacc acccggaaaa
     6541 gattacgccc gcgccacgcc cggcaccgac gccgccgcgc gccgcgcggc ctgcgcgcct
     6601 gccggtgacc gacatcgagc actggctgcg cgatccttat acgatctacg ccaagcgcat
     6661 cctgcacctc acgccgctcg atgaggtcga cgcggcgccg ggcgccgccg agcgcggcaa
     6721 cgtcatccac gccgccatcg gcgaattcac ccagcgcttt gcatctgcgc tgcccgcgga
     6781 tgcggtgcgc gagctcatcg cgctcggccg aacgcatttc gccgaggttg ccgagtttcc
     6841 cgaggcgcgg gcgctgtggt ggccgcgctt cgcgcgcatc gcgcgctggt ttgcggactg
     6901 ggagcgggcg cggcgtctgg ggcttgtcgc gattgacgcg gagatcgagg gcgaaatctc
     6961 gatcccgctc ggcgagcggg ttttcaagct gcgcgcgcgg gccgaccgca tcgagcgcca
     7021 ggccgacggc cgctacgtca ttatcgacta caagaccggt tcggcgcgca cggaaaaaca
     7081 ggtgcgcact gggcttgcac cgcagctcac gctcgaagcc gcgattttgc gcaagggcgg
     7141 attcgccgcc gtgccggctg gcggctcggt cgccgagctg gcctatgtgc tgctcaaggg
     7201 cgccgtgcct ccgggcaagc actgcgccat caaattcgaa gacggcacgc ccgacacaca
     7261 ggccgatcac gcgctggaga aactcacggc gctggtgacg cgcttcgagg ataagaacga
     7321 gccctatcgc tcgctcgtcc atccgatgtg gaaggcgcgc tacggcgact acgaccactt
     7381 ggcgcgggtc aaggaatggt cggcgaccgg cggtcccgag gacgagatcg tgatcccatg
     7441 agatcgccga acgtcattcc ctccgacgtg cggcgcgtgc aggccgccgt gtctgatccc
     7501 gccgtttccg cgtgggtcgc cgccaatgcc ggatcgggca agacgcacgt gctggcgcag
     7561 cgcgtgatca acctgctgct cgccggcgtc gagccagaga agatcctctg catcaccttc
     7621 accaaggcag cggccgcgaa tatggcgaag cgcgtgttcg acacgctcgc gcactggacc
     7681 acgctcgacg atgccgccct cgatgccgcc gttctcgacc gatccggttt gacgcttggc
     7741 acttcgttgc ccggcgcgaa gcgggccctg gcgcggcggc tttttgcccg cgcgctggag
     7801 acgccgggcg gcctcaaggt gcataccatc cacgccttct gcgcccagct cctgcaccag
     7861 tttcccttcg aagcgaacgt caccgcccac ttcaacgtgc tcgacgagac ggcgcaggtg
     7921 cagcttctgg aacaattgac attggccgtg ctgctcgaag gtgctgccgc gcccgatggc
     7981 ccgctcggcc gcgcgctcgg cactgcaatg actgccggcg ccgaccagac gtttcgcgac
     8041 ctgatgcgcg aagcgatcgg ccggcgcgac gcgatcagcg cctggctcat gagcaccggc
     8101 ggggttgacg aggcaatcgc cgctctttcc ggcgcgctcg gcatcgcgcc gcacgacacg
     8161 atcgacagcg tcgaggccga gttcttcgc
//
LOCUS       DATMQB010000458         5257 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_877363, whole genome shotgun sequence.
ACCESSION   DATMQB010000458 DATMQB010000000
VERSION     DATMQB010000458.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5257)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5257)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5257
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_877363"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..408)
                     /locus_tag="VNY79_13300"
     CDS             complement(<1..408)
                     /locus_tag="VNY79_13300"
                     /inference="COORDINATES: protein motif:HMM:NF024591.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fatty acid--CoA ligase family protein"
                     /protein_id="HWX73470.1"
                     /translation="MDAAGELQIRTPFVMNGYLDEPELTRAAFADGYFRTGDLARARE
                     DGRVELAGRIKDIIIRGGANVSPLELDHLLAQHPDVAAALTAGVPDPMVGERIHALVV
                     PRANASIGEKDLRQWVAGRIERFKWPDVYHFGRE"
     gene            complement(424..1371)
                     /locus_tag="VNY79_13305"
     CDS             complement(424..1371)
                     /locus_tag="VNY79_13305"
                     /inference="COORDINATES: protein motif:HMM:NF012711.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HWX73471.1"
                     /translation="MANLGRLLVEKFGGFADGPALADTGGALTYRELTQAATPVEQAL
                     RDARLSPDEPVLVPVANEPRDAAALIGAWLAGGVAVPVARHAPANAIEAVRKATGARF
                     SVTNTAEERVAQIAEKRPRPRPLLEGAALIVFTSGSTGQPKGVVLSHRAFAGKLEAID
                     GMLGFTPRTRSLLVLQITFVFGMWVLLLTLLKGGMARMQSRFEAAAVLSTLKAQGISD
                     VALVPTMLRKILALEESVSRPLIAGAALERILTGGEPFGRELNRQLKESMPNVHAVDI
                     FGLTETCSSDFFVTAEEREPYAGAIGRPGPGIEFRICDT"
     gene            complement(1364..2194)
                     /locus_tag="VNY79_13310"
     CDS             complement(1364..2194)
                     /locus_tag="VNY79_13310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020096117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HWX73472.1"
                     /translation="MSDGYQTIRLERSGVVALLTLSRPERLNAIDKRMLGELQYALDA
                     VERDDEVRALVVKGAGGNFSSGFDLKEQMEARPTGFEAWRKILDRDFSAVMRFWHCKK
                     PTIAAVQGYCLAGGCELALACDITIAAEDAVFGEPELKFGAGIVVMILPWLVGPKRAK
                     EIILTGADRIPAAEAARIGLVNRVVPPDQVESTALALARHIAVIDPSLVQQTKRAINQ
                     SFEMMGLVRALEAALDIDLAIEGEGSEDKRRFMEIARKEGLRRAVAWRDARFAGSADG
                     "
     gene            complement(2251..3021)
                     /locus_tag="VNY79_13315"
     CDS             complement(2251..3021)
                     /locus_tag="VNY79_13315"
                     /EC_number="1.1.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glucose 1-dehydrogenase"
                     /protein_id="HWX73473.1"
                     /translation="MHVNPFDLSGRVAVVTGGNGGIGLGMARGLAGAGAAIAIAARDE
                     RKAQKAVKELSDAGVRCRFYPLQVSSRSSCLKMVESVMSDFGRCDILINNSGTTIRKR
                     PEQLSEADWREIIDVNLSGTLFCAQAVYPHMKAAGRGKILNIGSMYSVFGAPLVAAYA
                     ASKGGVVQLTRSLAAAWAPDNIQVNVILPGWINTDLTKSAREQIQGLDAIVVSRTPAG
                     RWGEPDDLAGAAVFLCSPASDYVTGVSLPVDGGYSARG"
     gene            3119..3334
                     /locus_tag="VNY79_13320"
     CDS             3119..3334
                     /locus_tag="VNY79_13320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011502257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HWX73474.1"
                     /translation="MSATKILKVRVDRERCQGHARCFALAPELFELDQFGNGRERGDG
                     TVPTALEDKARLAQANCPEMAVEIIEE"
     gene            3347..4534
                     /locus_tag="VNY79_13325"
     CDS             3347..4534
                     /locus_tag="VNY79_13325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004497 - monooxygenase activity [Evidence
                     IEA];
                     GO_function: GO:0005506 - iron ion binding [Evidence IEA];
                     GO_function: GO:0016705 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen [Evidence IEA];
                     GO_function: GO:0020037 - heme binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome P450"
                     /protein_id="HWX73475.1"
                     /translation="MSTRPPSADWSTDFDHLDPRWAEDPYPIWDELRQKCPIAHTERF
                     QGAYFPSRYEDVRAIAYDTEHFSSRRPVVREVRPPLIPAPPITSDPPEHRPAKQVLLP
                     AFTPDVITRHEPRTREICRELLARIGERKRCDGAVEYSQEIPVRVIAHMLGVPEQDGN
                     LFRRWIKEVLEIGITDFAVLMRAQGEMIAYFADKIAARRASPGEDLITYLVNVRVEDR
                     TLTDDHINGTLRLLLIAGIDTTWSAIGSCLWHLARHTDDRRRLIGEPSLMNSAVEEFL
                     RAYAPVTMAREVVKETQVAGCTFKPGQMVLLSFPAANRDPAMFPDADRVILDRAQNRH
                     AAFGLGIHRCVGSNLARMEIRVALTEWLARFPEFRLDPDTPMTWSKGTVRGPRELPLL
                     LDA"
     gene            complement(4577..>5257)
                     /locus_tag="VNY79_13330"
     CDS             complement(4577..>5257)
                     /locus_tag="VNY79_13330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HWX73476.1"
                     /translation="RGMWSQYLEVGIGPDAEIFSKAQTMAAVGTGMDAGLHPLSNWNN
                     PEPEVVLAIASDGRIVGATLGNDVNLRDIEGRSALLLSKAKDNNASCAVGPFLRFFDV
                     SFTLDAVRAMTVTLMVTGPDGFRLDGVSHMNRISRDPVDLVGQMVGPHHQYPDGAVLF
                     LGTLFAPTKDRDAPGEGFTHHVGDIVTVAAPELGRLVNRMRRCPDCEPWRFGASHLMR
                     NLARRGLL"
BASE COUNT          889 a         1763 c         1720 g          885 t
ORIGIN      
        1 ctcgcggccg aaatgataga cgtcgggcca tttgaatctc tcaatccgcc cggcgaccca
       61 ttggcgtaaa tccttttcgc cgatgctggc attcgcccgc ggcacgacca gcgcgtggat
      121 ccgctcgccg accatcgggt cgggcacgcc tgcagtcagc gccgcggcga cgtcgggatg
      181 ctgagcgagg agatgatcaa gctccagcgg cgaaacgttg gcgccgccgc ggatgatgat
      241 gtccttgatc cgtccagcga gttcgacgcg gccgtcttcc cgcgcccgcg ccaggtcgcc
      301 ggtacggaaa tatccgtcgg caaaggccgc gcgggtaagc tccggttcgt cgagatagcc
      361 gttcatcacg aacggcgtgc ggatctgcag ctcgccggcg gcgtccaccg gcagttcgcg
      421 gttttacgtg tcgcaaatgc gaaactcgat gcccgggccg ggccggccga tcgcgccggc
      481 gtacggctcg cgttcctccg cagtgacgaa gaagtccgag ctgcaggttt cggtgagccc
      541 aaatatgtcg actgcgtgca cgttcggcat ggactccttg agctgcctgt tcagctcgcg
      601 gccgaatggt tcgcctccgg tcaggatccg ctcgagagcg gcgccggcga tcagcggccg
      661 cgacaccgat tcctcgagcg cgaggatctt gcgcagcatg gtggggacga gcgccacatc
      721 ggaaatacct tgcgccttga gcgtgctcag aacggccgcc gcctcgaacc gcgactgcat
      781 ccgcgccatg ccgcccttga gcaaggtcag cagcagcacc cacatgccga agacgaacgt
      841 gatctgcagg accagcagac tccgcgtgcg cggcgtgaag ccgagcatgc cgtcgattgc
      901 ttcgagcttt cccgcaaatg cgcggtggct cagcacaacg cccttcggct gtccggtgga
      961 gcccgacgtg aagacgatca gcgccgcgcc ttcgagcagc ggccgcggcc gcggccgctt
     1021 ttcagcgatt tgggcgacac gttcctcggc ggtattggtc acggagaatc gtgcgccggt
     1081 agctttgcgg acggcctcga tcgcgttcgc cggcgcatgg cgcgcgaccg gcaccgcgac
     1141 cccgccggca agccatgcgc cgatcagcgc cgcggcatcg cgcggctcat tggcgaccgg
     1201 cacaagcacc ggctcatcgg ggctcagcct cgcatcgcgc agcgcctgtt cgacgggggt
     1261 cgcagcttgg gtaagctcgc gataggtcag ggcgccgccc gtatcggcga gcgccgggcc
     1321 gtcggcaaag ccgccgaatt tttccacgag aaggcggccg aggttagcca tcggcgctcc
     1381 cggcgaaacg ggcgtcgcgc caggcgacgg ccctgcgcag tccttccttg cgcgcgattt
     1441 ccatgaaacg gcgcttgtcc tcgcttcctt cgccctcgat cgcgagatcg atgtcgagcg
     1501 cagcctcgag cgcacgaacg agacccatca tctcgaacga ctggttgatc gcccgcttgg
     1561 tctgctgcac cagagaagga tcgatcaccg cgatgtggcg ggcgagcgcg agcgcggtcg
     1621 attcgacctg gtccggcggc accacgcggt tgacgagccc gatgcgtgcc gcctcggccg
     1681 ccgggatgcg gtcggcgccg gtcaggatga tctccttggc gcgcttcggg ccgaccagcc
     1741 atggcaggat catgaccacg atgcccgcgc cgaatttcag ctccggctcg ccgaacaccg
     1801 cgtcctcggc cgcaatcgtg atgtcgcagg cgagcgccag ctcgcagccg ccggcgaggc
     1861 aatagccctg caccgcagca atcgtcggct tcttgcaatg ccagaagcgc atcactgcgg
     1921 aaaaatcgcg gtcgaggatt tttcgccacg cctcgaagcc ggtcgggcgg gcctccatct
     1981 gctccttgag atcgaagccg gaggaaaagt tgccgccggc gcccttgacg acgagcgcgc
     2041 ggacctcgtc gtcgcgctcc acggcatcga gggcatattg cagctcgccg agcatgcgct
     2101 tgtcgatggc gttgagccgc tccggccgcg acaaggtcag gagcgcgacg acaccggagc
     2161 gctccaggcg aatggtctga tagccgtcgc tcatggaatc gccgctcatg cctgccccag
     2221 acccgtcgtg gagttgcggt gcatcgaccg tcagccgcga gcagaatatc cgccgtcgac
     2281 tggcagcgac acgccggtga cgtaatccga ggccgggctg cacaggaaca ccgcggcacc
     2341 ggcgaggtcg tcgggttctc cccatctccc ggcaggcgtg cgcgacacga cgatggcatc
     2401 gagaccctga atctgctcgc gcgcactttt cgtgaggtcg gtgttgatcc atccgggcag
     2461 gatgacgttc acctggatgt tgtcgggcgc ccaggcggcg gcgagcgaac gggtgagctg
     2521 caccacgccg cccttgctgg cggcataggc agcgacgagc ggggcgccaa acaccgagta
     2581 catcgatccg atgttgagaa ttttgccgcg cccggccgcc ttcatatgcg ggtagacggc
     2641 ttgcgcgcag aacagggtgc cgctgagatt gacatcgatg atctcgcgcc agtcggcttc
     2701 ggaaagctgt tcggggcgct tgcgtatggt cgtgccggag ttgttgatga ggatgtcgca
     2761 gcggccgaaa tcgctcatga ccgattcgac catcttcagg cacgacgatc gcgacgagac
     2821 ctgaagggga tagaaccggc agcgaacccc ggcatcgctc agctccttta cggccttttg
     2881 tgctttgcgc tcgtcgcgcg cagctatcgc tatggccgct cccgcaccgg cgaggccgcg
     2941 cgccatgccc aggccgatgc cgccgttccc gccggtcacg accgcgacgc gtccgctaag
     3001 atcaaatgga ttcacgtgca actccctcca ccctcatggg cgctcccggc tttctcggga
     3061 accccgccgc atgctatcgt gcctgtccgt tcgagaacat ccggggaaat cggcgggcat
     3121 gtcggcaacg aagatcctga aagtgcgggt cgatcgcgag cgctgccaag gccatgcgcg
     3181 ctgctttgcg ctcgcgccgg agctgttcga gctcgaccag ttcggcaacg ggcgcgagcg
     3241 cggcgacggc accgtcccga cagcgctcga ggacaaggcg cggctcgcgc aggcgaactg
     3301 cccggagatg gcggtcgaaa ttattgagga atgagggggc gcgacgatga gcacacggcc
     3361 accttctgcc gattggtcga ccgacttcga tcatctcgat ccgcgctggg ccgaggaccc
     3421 ttacccgatc tgggacgagc tgcggcaaaa atgcccgatc gcgcacactg aacgcttcca
     3481 gggcgcctac tttcccagcc gctacgaaga cgtgcgcgcc atcgcctatg acaccgaaca
     3541 tttctcctcg cggcgcccgg tcgtgcgcga ggtgcgtccg ccgctcattc cggcgccgcc
     3601 gatcacctcc gacccgcctg aacaccggcc ggccaagcag gttctgcttc ccgccttcac
     3661 gcccgacgtg atcacccgcc acgagccgcg tacccgcgag atctgtcgcg agctgcttgc
     3721 gcgcattggc gaaaggaagc gctgcgacgg cgcggtcgag tattcgcagg aaattcccgt
     3781 gcgcgtgatc gcccacatgc tcggcgtgcc cgagcaggac ggtaatcttt tccgcaggtg
     3841 gatcaaggaa gtgctggaaa tcggtatcac cgatttcgcc gtgttgatgc gggcgcaggg
     3901 cgagatgatc gcctatttcg ccgacaagat cgcggcacgg cgcgcgagcc ccggcgagga
     3961 tctcatcacc tatctcgtca acgtgcgcgt cgaggaccgc acgctgaccg acgaccacat
     4021 caacggtacg ctgcgcctcc tcctgatcgc cggcatcgac acgacctgga gcgccatcgg
     4081 ttcctgcctg tggcaccttg cgcgacacac ggacgaccgc cggcggctca tcggcgaacc
     4141 cagcctcatg aactcggcgg tcgaggagtt tttgcgcgcc tatgcgccgg tgaccatggc
     4201 gcgcgaagtg gtcaaggaaa cgcaggtcgc cggctgcacc ttcaaacccg ggcagatggt
     4261 cctgctctcg ttcccggcgg ccaaccgtga tcccgcgatg tttccggatg ccgaccgcgt
     4321 gatcctcgat cgcgcccaga atcgccatgc cgccttcggc ctcggcatcc accgttgcgt
     4381 cggctccaat ctggcacgca tggaaatccg ggtggcgctg acggagtggc tggcgcgctt
     4441 tccggaattc cggctcgatc cggatacgcc gatgacgtgg tccaagggca ccgtgcgcgg
     4501 accgcgcgag ctgccgctgc tgctggacgc ataagttctc gtcgcgtcgc gccgtcggcc
     4561 caggcgctgc cctatctcaa agcaggccac ggcgtgcaag attgcgcatg aggtggcttg
     4621 caccgaaacg ccacggctcg cagtccgggc agcgccgcat gcggttgacc aacctgccaa
     4681 gctccggcgc ggcgacggtg acgatgtcgc cgacgtgatg ggtaaagcct tcgccgggcg
     4741 cgtcacggtc cttggtcggc gcgaacagcg tgccgaggaa aagcacagcg ccgtcgggat
     4801 actggtggtg cggaccgacc atctggccca cgaggtcgac gggatcgcgg ctgatgcggt
     4861 tcatgtgcga gacgccgtcg aggcggaagc cgtccggccc ggtgaccatg agcgtcaccg
     4921 tcatggcgcg caccgcgtcg agcgtgaagc ttacgtcgaa gaagcgcagg aaaggaccga
     4981 ctgcgcagct ggcattgttg tctttcgcct tggacagcag cagcgccgag cggccttcga
     5041 tatcgcgcag gttgacgtcg ttgccgagag tcgcgccgac aatgcggccg tcggaggcga
     5101 tggcgagcac gacttccggc tcgggattgt tccagttcga cagcggatgc agtcccgcat
     5161 ccatgccggt cccgaccgcg gccatcgtct gcgccttcga gaagatttcg gcgtccggtc
     5221 cgatgccgac ttcgagatac tggctccaca tgccgcg
//
LOCUS       DATMQB010000459         2531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2119250, whole genome shotgun sequence.
ACCESSION   DATMQB010000459 DATMQB010000000
VERSION     DATMQB010000459.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2531
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2119250"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..181)
                     /locus_tag="VNY79_13335"
     CDS             complement(<1..181)
                     /locus_tag="VNY79_13335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018459796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73477.1"
                     /translation="MADIVSDPLAWGRIKAPSLVELEVLAGEVFRRLPKKFRDLCAGL
                     VIQVDDFPSDEVLDAM"
     gene            272..532
                     /locus_tag="VNY79_13340"
     CDS             272..532
                     /locus_tag="VNY79_13340"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73478.1"
                     /translation="MSAKSFAVIAGFAALWLVGTTPPAAAQSQSPTGQGGTSLTLPRA
                     HPRIEIYPRQLLYRRCTDWYELQPRPSGTVLYPRMRCWWVRG"
     gene            complement(691..2097)
                     /gene="leuC"
                     /locus_tag="VNY79_13345"
     CDS             complement(691..2097)
                     /gene="leuC"
                     /locus_tag="VNY79_13345"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009316 - 3-isopropylmalate dehydratase
                     complex [Evidence IEA];
                     GO_function: GO:0003861 - 3-isopropylmalate dehydratase
                     activity [Evidence IEA];
                     GO_process: GO:0009098 - leucine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HWX73479.1"
                     /translation="MAKPRTLYDKIWDDHLVDEEADGTCLIYIDRHLVHEVTSPQAFE
                     GLRLAGRKVRAPEKTLCVVDHNVPTTDRRQKNPDPESEQQIAYLADNAKFFGLEYFDE
                     FDRRQGIVHIIGPEQGFTLPGVTLVCGDSHTATHGAFGALAYGIGTSEVEHVLATQTL
                     IQKKSRNMRAVVDGKLPPGVTAKDIILAIIGEIGTAGGTGYALEYAGEAIRALSMEGR
                     MTVCNMSVEAGAKAGFIAPDEKAYAYLQDRPKSPKGEAWDAAMRYWQTLQSDDGAHFD
                     REIRLDAAKLPPLVTWGTNPEQVVAVTGRVPRLEDIADANKREAAERSLGYMGLKGGE
                     NVADITLDRVFIGSCTNGRIEDLRAVAKVVDGKTVSANVKAMIVPGSGLVKEQAEAEG
                     LDKIFLKAGFEWREPGCSMCLAMNPDKLAPGERCASTSNRNFEGRQGYKGRTHLVSPA
                     MAAAAAIAGHFVDVREWS"
     gene            2273..>2531
                     /locus_tag="VNY79_13350"
     CDS             2273..>2531
                     /locus_tag="VNY79_13350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019196390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin"
                     /protein_id="HWX73480.1"
                     /translation="MAKAKAKAKAKTKTKAKSSARKVSARRPSSRRAVASARAGRKAR
                     PKQSFVVSHHREEDFDAGLRRYAKYRDLGINKATNGMVRAHV"
BASE COUNT          414 a          821 c          850 g          446 t
ORIGIN      
        1 ccatggcgtc gagcacctca tcgctcggga aatcgtcgac ctggatgacc agcccggcgc
       61 acagatcgcg aaatttcttc ggcaaacggc gaaacacctc gccggcgaga acctcgagct
      121 cgacgagcga gggcgccttt atccgccccc aggcgagcgg gtcggatacg atgtcggcca
      181 tgcccggtct tgtagagcgt tttgcgcccg gtgtcccgat tgacccgtgc gcccggatgc
      241 ggaagctttg ggcgaacgga gcaggggacc catgtcagca aaatcattcg cggtgattgc
      301 cggcttcgca gcactctggc tggtcgggac gacgccgccg gcggcggcgc aaagccagtc
      361 gccgaccgga cagggcggga cttcgctgac gctgccgcgc gcgcacccgc gcatcgaaat
      421 ctatccgcgg cagttgctct accggcgctg taccgactgg tacgagctgc agccgcggcc
      481 gagcgggacc gtgctctacc cgcgcatgcg ctgctggtgg gtgcgcgggt gaagtaaatc
      541 cttgtcattc gggcgcgggt acaagcccgc gcccgggaat ccataaccac gaagccggcg
      601 gttcacgacc ggtggtgccc ttacctcgac cgcggtggat atggattctg ggttcgcggc
      661 tgctccgcgc ccccggaatg acgagagttc tcagctccac tcccgtacat cgacgaaatg
      721 cccggcgatc gcggcagcgg cggccatcgc aggggagacg aggtgggtgc ggcccttgta
      781 gccctgccgg ccctcgaagt tgcggttcga ggtcgaggcg cagcgctcgc cgggagcgag
      841 cttgtccggg ttcatggcga ggcacatgga acagccgggc tcgcgccatt cgaagccggc
      901 cttgaggaag atcttgtcga ggccttcggc ttcggcctgc tccttcacca gtccggagcc
      961 gggaacgatc atcgccttga cgttggcgct gactgtcttg ccgtccacga ccttggccac
     1021 cgcgcgcaaa tcctcgatgc gcccattggt gcaggagccg atgaacacgc gatcgagcgt
     1081 gatgtcggcg acattctcgc cgcccttgag gcccatgtag ccgagcgagc gttccgcggc
     1141 ctcgcgttta ttcgcgtcgg cgatgtcttc gaggcgcggc acccggccgg tgacggcgac
     1201 cacctgctcg gggttcgtgc cccaggtcac gagcggcggc agttttgccg cgtcgagcct
     1261 gatctcgcgg tcgaaatggg cgccgtcgtc ggactgcagc gtctgccaat aacgcatggc
     1321 cgcgtcccag gcctccccct tcggcgactt ggggcggtct tgcagatagg cgtaggcctt
     1381 ctcgtccggc gcgatgaagc cggccttggc gccggcctcg accgacatgt tgcacacggt
     1441 catgcggcct tccatcgaca gcgcgcggat cgcctcgccg gcatattcga gcgcgtagcc
     1501 ggtgccgccg gcggtgccga tctcgccgat gatggcgagg atgatgtcct tggcggtgac
     1561 gcctggcggc agcttgccgt cgacgacggc gcgcatgttc ctcgactttt tctggatgag
     1621 cgtctgcgtc gccagcacgt gctcgacttc cgaggtgccg atgccgtagg cgagcgcgcc
     1681 gaaggcgccg tgcgtcgccg tgtggctgtc gccgcagacg agcgtcacgc ctgggagagt
     1741 aaaaccctgc tccggcccga tgatgtggac gatgccctgc cgccggtcga actcgtcgaa
     1801 atattcgagc ccaaagaact tggcgttgtc ggccagatag gcgatctgct gctcgctttc
     1861 cgggtccggg ttcttctgcc ggcggtcggt cgtcggcacg ttgtgatcga cgacgcacag
     1921 cgtcttctcc ggcgcgcgca ccttgcggcc ggcgagccgc aagccctcga aggcctgcgg
     1981 gctcgtcacc tcatgcacga ggtggcggtc gatatagatg aggcaggtgc cgtccgcctc
     2041 ttcgtcgacg agatgatcgt cccagatctt gtcgtagagg gttcgaggct tggccatggg
     2101 ccggtttcct gtgcaatact cgcttgcagc ctatttagtc ggttgcaaag caaaggaaaa
     2161 gtggcgtccg gcggcgcgtt ttgtagatgg ccgcactagc ccgaaccgcc gaccggcatc
     2221 ctgtcgccgt tccgcgccgc gcgccaggca gagacagcaa ggggaggttc ttatggccaa
     2281 agcaaaggct aaagcaaagg caaagacgaa gacaaaggcg aaatcttctg cgcgcaaggt
     2341 cagcgcccgc cgcccatcca gccgccgcgc ggtcgcgagc gcacgggccg ggcggaaggc
     2401 gcgcccgaag cagtcattcg tggtcagcca tcaccgcgaa gaggattttg acgccggcct
     2461 gcgccgctac gccaagtacc gcgacctcgg catcaacaag gccaccaacg gcatggtgcg
     2521 ggcgcatgtg a
//
LOCUS       DATMQB010000460         2147 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3345056, whole genome shotgun sequence.
ACCESSION   DATMQB010000460 DATMQB010000000
VERSION     DATMQB010000460.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2147)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2147)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2147
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3345056"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            4..>2147
                     /locus_tag="VNY79_13355"
     CDS             4..>2147
                     /locus_tag="VNY79_13355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_process: GO:0030420 - establishment of competence for
                     transformation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ComEC/Rec2 family competence protein"
                     /protein_id="HWX73481.1"
                     /translation="MVDESKARSRARTWPVTGPRAVWGAAWPRAEFAVPARLREWARA
                     EAGAGRLLPWFAVAFGAGIVLYFTAEHEPALWAASAAAGAGIVAAVLLRRRPIAFVPA
                     LGLLAVCAGFAVATIKAALIAHPVLRYPAYSVSLAGFVTLREESQKSDRFVMRVERIE
                     GSRIVETPERVRLSVRRGMAPPAGAFVEVKAQLEPPLQRLRPGGYDFARDLYFQRIGA
                     SGFVRGAVKIVTPPAALGAWLALGAYVQGVRDAIDGRIRSVLAGDPGAIASALITGKR
                     DAISPAVYDAMFVSGIGHVLSISGYHMALVAGIVFFVVRAILALTPGLADRAPNKKWA
                     ALAALIVTAFYLVLSGAEVATQRSFIMIAIVLIGVMFDRPILTLRTVTIAALLVLLFA
                     PEAIVHPSFQMSFAATLALVAGYERGLSWARAGADSSLGARAALWGVREVASVILASL
                     LAGLATTPYAAYHFHRLAPYGVLANLLAMPIVSVWVMPMGILGVVAIPFGFDAEFWRQ
                     MGHGIDWMDAVALWVASLPGAFGRVTAFGTGPLLLCTAGLLVIGLLKTPLRWSGVAIM
                     LVAVIWAGLTPVPDILVGADGRTFAVRGADGRLAFHHTGGDTFATREWLAADADGRDV
                     RDPSLGNGIACDPSGCIGKLADGRLVSHALAADALEEDCERAVLIVTARDTPPGCAAT
                     VVGRDLWRTRGALTLRRNGSGFVMEAARPPNY"
BASE COUNT          234 a          773 c          742 g          398 t
ORIGIN      
        1 gcggtggtgg acgagagcaa ggcgcgaagc cgcgcgcgga cgtggccggt caccgggccg
       61 cgggccgttt ggggcgccgc atggccgcgc gccgagtttg ccgttccggc gcggcttcgc
      121 gaatgggcga gggccgaggc cggcgccggc cggctcctgc cctggtttgc ggtcgctttc
      181 ggtgccggca tcgttctcta tttcaccgcg gagcatgaac cggcgctgtg ggctgcgtcg
      241 gcggcggccg gtgccggcat cgtcgccgcc gtgttgctgc gccggcggcc catcgccttc
      301 gtgccggcac tcggcctgct tgccgtttgc gcgggcttcg ccgttgcgac aatcaaagcc
      361 gcgctgatcg cccatcctgt gctgcgctat cccgcctata gcgtctcgct cgccggcttc
      421 gtcaccttgc gcgaggagag ccagaaatcc gaccgcttcg tgatgcgcgt cgagcgcatc
      481 gaggggagcc gcatagtcga gacgcccgag cgtgtgcgcc tctcggtacg ccgcggcatg
      541 gcgccgcccg cgggcgcgtt cgtcgaggtc aaggcccagc ttgaaccgcc gctgcagcgg
      601 ctgcggccgg gcggctacga tttcgcccgc gacctttatt tccagcgcat cggcgcctcc
      661 ggcttcgtgc gcggcgcggt gaagatcgta acgccgcccg cggcgttggg cgcgtggctc
      721 gctctcggcg cctacgttca gggggtgcgc gatgccatcg atggccgtat ccgctcggtg
      781 ctcgccggcg atcccggcgc gatcgcgtct gctctgatca ccggcaagcg tgacgcgatc
      841 tcgcccgccg tctacgacgc gatgttcgtt tccggcatcg gccacgtgct gtcgatctcg
      901 ggctaccaca tggccttggt cgccggcatc gtgttcttcg tcgtgcgcgc gatcctcgcg
      961 ctcactcccg ggctggcgga cagggcgcca aacaagaaat gggctgcgct cgccgcgctc
     1021 atcgtcaccg cgttctatct cgtcctttcc ggcgcggagg tcgcaaccca gcgctccttc
     1081 atcatgattg cgatcgtgct catcggcgtg atgttcgatc ggccgatcct gactctgcgc
     1141 acggttacga tcgcggcgct gctggtcctg ctgtttgcgc cggaggcgat cgtgcacccg
     1201 agcttccaga tgtcgtttgc ggcgaccctg gcgctggtcg ccggctacga gcgcggcctc
     1261 tcgtgggcgc gcgccggcgc cgattcctcg ctcggcgccc gcgccgcgct ctggggcgtg
     1321 cgcgaagtcg cgagcgtgat cctcgcatcg ttgctcgcag gcctcgccac cacgccgtac
     1381 gcggcctacc acttccaccg gctcgcaccc tacggcgtgc tcgccaacct tctggcgatg
     1441 ccgatcgtct cggtctgggt catgccgatg ggcatcctcg gcgtcgtcgc cattcccttc
     1501 ggcttcgacg ccgagttctg gcggcagatg ggtcatggca ttgactggat ggacgcggtc
     1561 gcgctgtggg tcgcgagcct tcccggtgcc ttcggccgcg tcaccgcctt cggcaccggg
     1621 ccgctcctcc tctgtaccgc ggggctcctg gtcatcgggc tgttgaagac gccgctgcgt
     1681 tggagcggcg tcgcgatcat gctcgtcgcc gtgatctggg cggggcttac gccggtgccg
     1741 gacatcctcg tcggcgccga cggccgcacc ttcgcggtgc gcggcgcgga cggccggctc
     1801 gccttccatc acaccggcgg cgacactttt gcgacgcgcg agtggcttgc cgccgacgcg
     1861 gacggccgcg acgttcgcga tccgagcctc ggcaacggca tcgcctgcga cccgtccggc
     1921 tgcatcggca aactcgccga tggccggctg gtctcccacg cgctcgccgc cgatgctctg
     1981 gaggaggact gcgagcgcgc cgtcctcatc gtgaccgcgc gcgacacgcc gcccggctgc
     2041 gccgccacgg tggtcggtcg cgatctgtgg cgcacccgcg gtgctttgac gctccgccgc
     2101 aatggctcag gcttcgtgat ggaggcggca cggccgccga actacga
//
LOCUS       DATMQB010000461         6811 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2398200, whole genome shotgun sequence.
ACCESSION   DATMQB010000461 DATMQB010000000
VERSION     DATMQB010000461.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6811)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6811)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6811
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2398200"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1799)
                     /locus_tag="VNY79_13360"
     CDS             complement(<1..1799)
                     /locus_tag="VNY79_13360"
                     /inference="COORDINATES: protein motif:HMM:NF024893.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AsmA family protein"
                     /protein_id="HWX73482.1"
                     /translation="MTAATGLKRLAIAVATMIAAAFATLVALSFLMPAASVRDAVDRE
                     IHAVTGLEPVLRGSISISLFPSGTVSFHNVLLGNDPNGQPAVVADELIAHLRYFPLLA
                     GRIEIADVTLVRPTISVSFLPGGESNWSGLIQSLAHALEPDPGRTASFSEIGIHEGTV
                     IVHNEYGGKDLTDRLEGVEFQLAWPSISRSFGANGRFVWHDEPIEASLTLSDFLAALS
                     GDRSGLKVRLSGAPLKVAFDGAASYQPALKVEGTLSVDSPSLRDAMHWTDASKLPFGG
                     FGRFALRAQSTIGGGVVSLSSVNVELDGNTAEGALTLATDGHRAVQGTLAADALDLTP
                     YVSGVRVLATNERNWNRLPISLDGLTDFDIDLRLSAASVKIAGAQLGRTAIAANMRGG
                     KLDLAIGEAQAFGGTAKGSLGLVSTDGNAAVSSRMQFIDVDLASCLGQMFGVHKLEGR
                     GNLALNLDGSGASVLALTSTLSGSASLTAHGGALAGVNVEQWLRRLERRPLSGNGDFR
                     SGRTPFDQLTLNLKIVQGVVSVDDMHVDGPAVRIAAGGQALVPTRELDLKGVATLISS
                     ATGNEFALPFIVQGQWDDPIMLPDPQSLIRRSGA"
     gene            complement(2030..2782)
                     /locus_tag="VNY79_13365"
     CDS             complement(2030..2782)
                     /locus_tag="VNY79_13365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012320012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1194 domain-containing protein"
                     /protein_id="HWX73483.1"
                     /translation="MRAIKTLLFVVLAAAALRPAVAPAADKVDLLLVLAADVSRSIDN
                     PKFQLQREGYAAAVSNPRVLDAVRSGHNGRIGVTYVEWSGVGSQRVLIDWTALGDAES
                     AKVFGDRLLEAPRSFADRTSISGAIEFAMAQFARAPFESVRRTIDISGDGTNNAGRDV
                     TLARDEAVAKGITINGLVILSATPLPWNPDHTNPPGGLDNYYRTNVVGGPGAFVLVAK
                     DFSSFGEAIIEKMIAEVALAREQAPRRAAAAR"
     gene            complement(2812..3264)
                     /locus_tag="VNY79_13370"
     CDS             complement(2812..3264)
                     /locus_tag="VNY79_13370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HWX73484.1"
                     /translation="MTALTVNGRTYEIDVEPDTPLLWVLRDTLGLTGTKFGCGIAQCG
                     ACTVHIDGVAMRSCLVAVDGVGAKQVTTIEALAPADGQLHAVQQAWLDLDVPQCGYCQ
                     SGMLMAVAALLREKPKPTDADIDAAITNICRCGSYQRVRAAIHAAANA"
     gene            3479..3667
                     /locus_tag="VNY79_13375"
     CDS             3479..3667
                     /locus_tag="VNY79_13375"
                     /inference="COORDINATES: protein motif:HMM:NF040444.3"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF6496 domain-containing protein"
                     /protein_id="HWX73485.1"
                     /translation="MARKYSPSASKDVKGAMEKRKRGTLKSGRSGKKVTSRKQAIAIG
                     LSEARRKGKKVPKKRASR"
     gene            complement(3707..4834)
                     /gene="pqqE"
                     /locus_tag="VNY79_13380"
     CDS             complement(3707..4834)
                     /gene="pqqE"
                     /locus_tag="VNY79_13380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018149 - peptide cross-linking [Evidence
                     IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqE"
                     /protein_id="HWX73486.1"
                     /translation="MAGNGAESGAAGNGAAGNSAALHKPLGLLAELTHRCPLGCPYCS
                     NPIALDRRGDELDTETWARVFTEAAALGVLQVHLSGGEPGARRDLVAITAAARAAGLY
                     TNLITSAVGITAETLRKLADAGLDHVQISIQDSERASADHIAGYEGAFVRKRALAAEV
                     VQLKIPLTVNAVMHRANIDRIGAMVDLALALGASRVEIAHVQYYGWALKNRTALMPTA
                     EQVERAAVEVEELRRRHHGKIVIDAVVPDYYARLPKPCVGGWGRRSLNVTPAGKVLPC
                     HAAESIPGLEFWSVREHSLADIWANSPAFNAFRGTDWMQEPCRSCARREIDFGGCRCQ
                     AFALTGDARATDPVCHLSPRHGEVGALAAVRTEAPYDYRRM"
     gene            complement(4962..5252)
                     /gene="pqqD"
                     /locus_tag="VNY79_13385"
     CDS             complement(4962..5252)
                     /gene="pqqD"
                     /locus_tag="VNY79_13385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020174457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0048038 - quinone binding [Evidence IEA];
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis peptide
                     chaperone PqqD"
                     /protein_id="HWX73487.1"
                     /translation="MNEPAAPIADDARPRLPRGVRLVHNEAQGGWVLLAPERVFKADA
                     IAVEVVKRCTGEATFAAIVDELATTYSAPRERVLADVTVLLRGLADKRLLEL"
     gene            complement(5249..6028)
                     /gene="pqqC"
                     /locus_tag="VNY79_13390"
     CDS             complement(5249..6028)
                     /gene="pqqC"
                     /locus_tag="VNY79_13390"
                     /EC_number="1.3.3.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007595667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0018189 - pyrroloquinoline quinone
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroloquinoline-quinone synthase PqqC"
                     /protein_id="HWX73488.1"
                     /translation="MNDKPVLEAAKDAIGLLTPEELEARLRDIGARRYHRLHPFHKLL
                     HGGKCSKGQVQAWALNRYYYQAMIPIKDASLIARCEDSATRREWRSRLVDHDGARAGE
                     GGIARWLKLTDGLGLDRDYVASLRGLLPATRFAVDAYVRFVREKSLLEAVASSLTELF
                     SPQIIGERMEGMLKSYDFVTAETLAYFSQRPPQAERDSRFALDYVKQHARTAETQQRV
                     LAALEFKCDVLWAMLDALSHAYVAPRQVPPGAFLPQDQERA"
     gene            complement(6025..>6811)
                     /locus_tag="VNY79_13395"
     CDS             complement(6025..>6811)
                     /locus_tag="VNY79_13395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="pyrroloquinoline quinone biosynthesis protein
                     PqqB"
                     /protein_id="HWX73489.1"
                     /translation="TQASLAVSTDGERWVLLNASPDLRAQVQATPALQPRAGTRDTPI
                     AAVVLTGAEVDQVAGLLVLRERQNFTVLATSETLAALDANPIFRVLAGDVVTRKAVAR
                     NVPFALPGDLEVELFSVPGKVALYLEDDDPALAAETGANVGVEVACGDRRLLYVPGAA
                     AVNADLRQRLDRADVVLFDATLFVDDEMILTGTGDKTGRRMGHMPLDGADGTLAALGG
                     LRGRRILTHINNTNPILIKGSAERRKVEAAGFEVAEDGMEIVL"
BASE COUNT         1092 a         2237 c         2416 g         1066 t
ORIGIN      
        1 gcgcccgagc ggcggatcag gctttgcggg tccggcagca tgatcggatc gtcccattgg
       61 ccctggacga tgaagggcag ggcgaactcg ttgccggtgg ccgaggaaat gagcgtggcg
      121 acccctttga ggtcgagttc gcgtgtcggc accagcgcct ggccgccggc ggcgatgcgc
      181 acggccggcc catcgacgtg catgtcgtcc acggagacga cgccctgcac gatcttgagg
      241 ttcagcgtca actggtcgaa cggcgtccgt ccgctgcgga agtcgccatt gccggagagc
      301 ggccggcgct cgaggcggcg cagccattgc tcgacattga cgccggcgag cgccccgcca
      361 tgcgcggtca ggctcgccga cccgctgagc gtgctggtca gcgccagcac cgaggctccg
      421 gatccgtcga ggttgagcgc caaattgccc cggccctcga gcttgtggac gccgaacatc
      481 tgcccgagac agctcgcgag atcgacgtcg atgaattgca tccgcgaact cacggcggcg
      541 ttcccgtcgg tgctgacgag ccccagcgag cctttcgcgg tgccgccgaa agcctgtgct
      601 tcgccgatcg ccagatcgag cttgccgccg cgcatgttgg cggcgatcgc cgtgcgtccg
      661 agttgcgcgc ccgcgatctt gacgctcgcc gccgaaagcc gcaggtcgat atcgaagtcg
      721 gtcagtccgt cgagtgaaat cggcagccgg ttccagttgc gctcgttggt ggcgagcacg
      781 cgaacgccgg agacataggg cgtcaggtca agcgcgtcgg ccgcaagcgt gccttgaacg
      841 gcgcgatggc cgtcggtggc gagcgtcagc gcgccttcag cggtattgcc gtcgagctcg
      901 acgttgacac tggacagcga gaccacgccg ccgccgatcg tgctctgggc gcgcagcgcg
      961 aaacgcccga agccgccgaa cggcagcttg ctggcgtcgg tccagtgcat ggcgtcgcgc
     1021 agcgagggag aatcgacgct cagcgtgcct tcgaccttga gcgccggctg atagctcgcc
     1081 gctccgtcga aggcgacttt cagcggcgcg ccggagagcc gcactttgag gccggagcgg
     1141 tcgccactca gcgccgcgag aaaatcgctc agcgtgaggc tcgcctcgat cggctcgtca
     1201 tgccagacga agcggccgtt ggcgccgaag ctgcgggaga tcgacggcca ggcgagttga
     1261 aactccacgc cctcgagccg gtcggtgagg tccttgccgc catactcatt gtggacgatg
     1321 acggtgcctt cgtggatgcc gatctccgag aaagaggcgg tgcggccagg atcgggctcg
     1381 agcgcgtggg ccagcgattg gatgaggccc gaccagttcg actcgccgcc gggcaggaag
     1441 ctgacgctga tcgtcggccg cacgagggtc acgtcggcga tctcgatccg ccccgcgagc
     1501 agcgggaagt agcgcagatg cgcgatcaac tcgtcggcca ccacggccgg ctgcccgttc
     1561 gggtcgttgc cgagcaacac gttgtggaag ctcaccgtgc cggaggggaa caatgagatc
     1621 gagatcgagc cgcgcagcac cggctcgagg ccggtgacgg cgtgaatctc gcggtcgacg
     1681 gcatcccgca ccgacgcggc aggcatgaga aacgacagcg cgaccagggt ggcgaacgcc
     1741 gcggcgatca tggttgcaac ggcgatcgcg aggcgcttca agccagtggc cgcggtcaca
     1801 ggacgccttt ccaaagtctg gtaggccagt cggactgggg gtgtgggtag gcgtccaagc
     1861 tgcccgacat ctgtgtcgct ttcgtggccg ggccagcggg atacggcaca attgttgccg
     1921 gccggccaca ccggtcaata tcaacccctg tcggggccgc catgggcgcc ggggccgtcc
     1981 gacttcttcc tccactcgcc gcgggaacga acaaagaggt ggaagcggtt taccgggctg
     2041 ccgcggcccg ccgtggcgcc tgttcccgcg ccagcgccac ctcagcgatc atcttttcga
     2101 tgatggcctc gccgaacgag ctgaagtcct tggccaccag cacgaaggca ccgggaccgc
     2161 cgacgacatt ggtgcggtag taattgtcca gcccgcccgg cggattggtg tggtcgggat
     2221 tccacggcag cggcgtagcg ctgaggatga cgagcccgtt gatggtaatg cccttggcga
     2281 cggcttcgtc gcgcgccaag gtcacgtcgc ggccggcatt gttcgtgccg tcgccggaga
     2341 tgtcgatggt gcggcgcacc gattcgaaag gggcgcgcgc gaactgcgcc atggcgaact
     2401 cgatcgcgcc gctgatcgag gtgcggtccg cgaacgagcg cggcgcctcc agcagccgat
     2461 cgccgaacac cttcgccgac tcggcgtcac ccagcgctgt ccagtcgatc agcacccgct
     2521 gcgagccgac gcccgaccac tcgacgtagg tcacgccgat gcggccgtta tggcccgagc
     2581 gaacggcatc gagcacgcgc gggttggaga cggcggcggc gtagccttcg cgctgcagct
     2641 ggaatttcgg attgtcgatg ctgcgcgaca cgtcggctgc gagcacgagg agaaggtcca
     2701 ccttgtcggc ggccggtgca acggccggcc ggagcgcggc ggcagcaagg accacgaaca
     2761 acagggtttt gatcgcgcgc atccgcggtc cctcaccggc tcccgctgct gtcacgcgtt
     2821 ggccgcggca tggatcgcgg cgcggacgcg ctggtagctg ccgcagcggc agatgttggt
     2881 gatcgccgcg tcgatatcgg cgtcggtcgg cttcggcttt tcccgaagca gggccgccac
     2941 cgccatcagc attccgcttt gacaatagcc gcattgcggc acgtcgagat cgagccaggc
     3001 ttgctgcacg gcgtgcaatt ggccgtcggc cggcgccagc gcctcgatgg tcgtcacctg
     3061 ctttgcgccg acgccgtcga ccgcgacgag gcaggagcgc atggcgacac cgtcgatgtg
     3121 cacggtgcag gcgccgcact gggcgatgcc gcagccgaac ttggtgccgg tcaagccgag
     3181 cgtgtcgcgc agcacccaca gcaacggcgt gtcgggctcg acatcgatct cgtaggttct
     3241 tccgttgacg gtaagcgccg tcatggtcgt ctttccgttg tgcgccggcc cacggtcacg
     3301 aggcgccggc ctgcgttgag ggcaagctta ctctgtcgcc gcaccgatgc gaagccgccg
     3361 cggcgtagga gatcggaacg atattgcggc aagtggcttc tcatccggga acaactagga
     3421 gtttgccatc atcgtggcga gggtcccggg gcgtctcgca ccaaatggga gattgaacat
     3481 ggcgcgcaaa tattcaccga gtgcgtcgaa ggacgtcaag ggcgcgatgg agaagcgcaa
     3541 gcgcggaacg ctcaagagcg gcagaagcgg caagaaggtg acgagccgca agcaggcgat
     3601 cgccatcggc ctttccgagg cgcggcgaaa gggcaagaaa gttccgaaga agcgcgcgag
     3661 ccggtaacgg ccgcgcaagc cgcggcggct cgtcgaacgg tccgtcttac atgcggcggt
     3721 agtcgtaggg cgcttcggtc cgcaccgccg cgagagcgcc gacctcgccg tggcgcggcg
     3781 agagatggca gaccgggtca gtcgcacgtg cgtcgccggt cagcgcgaag gcctggcagc
     3841 ggcagccgcc gaaatcgatc tcgcggcgcg cgcagctccg gcacggctcc tgcatccaat
     3901 cggtgccgcg gaaggcgttg aacgccggcg agttcgccca gatgtcggcg agcgaatgct
     3961 cgcgcacgga ccagaattcg aggccgggta tcgattcggc ggcgtggcag ggcagcacct
     4021 tgcccgccgg cgtgacgttg agcgaacgcc ggccccagcc gccgacgcaa ggtttcggca
     4081 gccgggcgta gtagtcgggc accaccgcgt cgatcacgat cttgccgtga tggcgccggc
     4141 gcaattcctc gacctctacc gcggcgcgct caacctgctc ggcggtcggc atcagggcgg
     4201 tgcggttctt cagggcccag ccgtagtact gcacgtgcgc gatctcgacg cggctggcgc
     4261 cgagcgccag tgcgaggtca accatggcgc cgatgcggtc gatgttggcg cggtgcatca
     4321 ccgcattgac ggtaagtgga atcttcagct gcaccacctc ggctgcgagc gcgcgcttgc
     4381 ggacgaaggc gccttcgtag cccgcgatat ggtcggcgga ggcgcgctcg ctgtcctgga
     4441 tcgagatctg cacatggtcg aggccggcat cggcgagctt gcgcaaagtc tcggccgtga
     4501 tgccgaccgc cgacgtgatg agattggtgt agaggccggc ggcgcgcgcc gccgccgtga
     4561 tggcgacgag gtcgcgccgc gcccccggct cgccgccgga cagatgcacc tgcagcacgc
     4621 cgagcgccgc ggcctccgtg aacacccgcg cccaggtctc ggtatcgagt tcgtcgccgc
     4681 gccgatcgag cgcgatcgga ttggagcaat agggacagcc gagcggacag cggtgcgtca
     4741 gctcggcgag aagcccaagg ggcttgtgga gcgcggcgct gtttcctgct gcgccgttcc
     4801 ctgccgcacc gctctctgcg ccatttcctg ccatttggcg ttttctcttc ccatcgcggc
     4861 cggcttgcgc tgtacggtgc cggccgtcca aaaagtccct gccgcccagg gagctattgg
     4921 gcgcgcgcac ccggcacaag gccggccgcg cggccgcgtt gtcacaattc caggagccgc
     4981 ttgtcggcaa ggccgcgcag cagcaccgtc acgtcggcga gcacgcgttc gcgcggtgcc
     5041 gaataggttg tggccagctc gtcgacgatt gcggcgaatg tcgcttcgcc ggtgcagcgt
     5101 ttgaccacct cgacggcgat ggcgtcggcc ttgaacacgc gctccggcgc cagcagcacc
     5161 cagccgccct gggcctcgtt gtgcacgagc cgcaccccgc gcggcaggcg cgggcgcgcg
     5221 tcgtcggcga tcggagcggc cggctcgttc acgcgcgctc ctgatcctgt ggcaagaacg
     5281 cgccgggggg cacctgccgg ggcgcgacgt aggcatgaga gagcgcatcg agcattgccc
     5341 acagcacgtc gcacttgaat tccagcgccg caagcactcg ctgctgcgtc tcggcggtgc
     5401 gtgcgtgctg cttgacgtag tcgagggcga agcgcgaatc gcgctcggcc tgcggcgggc
     5461 gctgcgagaa ataggcgagg gtctccgcgg tcacgaagtc gtagctcttg agcatgccct
     5521 ccatgcgctc gccgatgatt tgcggcgaga acagctcggt gagcgaggag gcgactgcct
     5581 ccagcagcga cttctcgcgc acgaaacgca cataggcatc gacggcaaac cgcgtcgccg
     5641 gcaacagccc gcgcagcgag gcgacgtagt cgcggtcgag gccaagcccg tcggtgagct
     5701 tgagccaccg ggcaatgccg ccttcgcccg cgcgcgcgcc gtcgtggtcg acgagccggc
     5761 tgcgccactc gcggcgcgtc gccgaatcct cgcagcgggc gatcaggctc gcgtccttga
     5821 tcgggatcat cgcctggtaa tagtaacggt tgagcgccca cgcctggacc tggcccttgc
     5881 tgcatttgcc gccatgcaag agcttgtgga acgggtgcag ccggtgatag cggcgcgccc
     5941 cgatgtcgcg caggcgcgct tccagctcct cgggcgtgag aaggccgatc gcatctttcg
     6001 cggcttcaag gaccggtttg tcgttcacag cacgatctcc attccgtcct cggcgacctc
     6061 gaagcctgcg gcctcgacct tgcggcgttc ggccgaaccc ttgatcagga tcggattggt
     6121 gttgttgatg tgggtcaaga tgcgccggcc gcgcagcccg ccgagcgccg cgagcgtgcc
     6181 gtcggcgccg tcgagcggca tgtggcccat gcgccggcca gtcttgtcgc cggtgccggt
     6241 caagatcatc tcgtcgtcga cgaagagggt ggcgtcgaac agcacgacgt cggcgcggtc
     6301 gagccgctgg cgcaagtcgg cgttcacggc ggcggcgccc gggacgtaga gcagcctgcg
     6361 gtcgccgcag gcgacctcga cgccgacatt ggccccggtc tccgcggcga gcgcgggatc
     6421 gtcgtcctcg agatagagcg ccaccttgcc ggggacggaa aacagctcga cctcaaggtc
     6481 gcctggcagc gcaaatggca cgttgcgcgc gacggccttg cgggtcacca cgtcgccggc
     6541 gagcacccgg aagatcggat tggcgtcgag cgcggcaagc gtttcggagg tggcaagcac
     6601 ggtgaaattc tggcgttcgc gcaggacgag gaggccggcg acctgatcga cctctgcgcc
     6661 ggtcaggacg acggcggcga tcggcgtgtc gcgtgtgccg gcgcgcggct gcaacgcagg
     6721 cgtcgcctgc acctgggcgc gcagatcggg cgaagcattg aggaggaccc agcgctcgcc
     6781 gtcagtggag acggcgaggc tggcctgtgt g
//
LOCUS       DATMQB010000462         3027 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3660966, whole genome shotgun sequence.
ACCESSION   DATMQB010000462 DATMQB010000000
VERSION     DATMQB010000462.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3027)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3027)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3027
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3660966"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            225..647
                     /locus_tag="VNY79_13400"
     CDS             225..647
                     /locus_tag="VNY79_13400"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: protein motif:HMM:NF013228.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HWX73490.1"
                     /translation="MTDTKGVPIRRLNPPELGSPPGYSQIVEVRASRIVFIAGQIALY
                     RDGVLVGKNDFAAQAEQVFRNLGIALETVGCTASDLVKLTVFLRDMGQLAAYREARDR
                     FFATVTPPAAPAVTLVEVSKLYGSDFLIEIEAVAASAT"
     gene            complement(651..1349)
                     /locus_tag="VNY79_13405"
     CDS             complement(651..1349)
                     /locus_tag="VNY79_13405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020176038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HWX73491.1"
                     /translation="MKKAPSRAIGRRRVLEAAALLGVAALTPARAANAQISRKATPAA
                     KTRVAAMSNDLSADEIRTLLQLEPNATCGFVRVTFVSKQSIAAGGLPAPFADGRPLGS
                     ALYFMVTPVAPVRLHRIRNDQLYHYYLGDPIELFLLHADGRSERVIVGPDLRGGQRVQ
                     QLIPGNTFHTARLVGRRRWFLGASTEWPGVVPADVEIGDLDELAAKYPAVAADLLAIA
                     ASVRHVAPAGADRG"
     gene            1495..>3027
                     /locus_tag="VNY79_13410"
     CDS             1495..>3027
                     /locus_tag="VNY79_13410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009028608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005507 - copper ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="multicopper oxidase domain-containing protein"
                     /protein_id="HWX73492.1"
                     /translation="MWRAVREWYIVGIGLLLIAGGLALAAHQSSPPAAVNQAAGTAPD
                     QTTPAPKTATRTAQQAAPGTASGIPAPRVTAAAVPAGQSPVSTAPAAPAAVAAAQTTA
                     ASPAPLSHDHATASAASETSAQALPTPSASPASGGDPVAGRLVFRKCQACHSLEPGKN
                     ILGPSLAGIIGRKAGAEPGYSYSPALKQADILWDGKTLDSYLADPQKMVPGNKMPFPG
                     LKTEHDRADVIAFLAPPTGGAQPAAAAPSAARQDAPAPAAAAGQQPAATDQARQSPPS
                     SDIGYIADAKYTLRSGIAEGRMVYIGVGGAIEGKVNPLLTAAEGQVVQLTLINGEGAE
                     HDIIFPDQDAKSPRVTGKGASTTIALRATKSGDFIYFCSVPGRQLAGMQGQFIVTPRP
                     APQAVVEADISREPDDLPPPIARREPQSVRVDLLSVEVEGRLAEAITFGYWTFNGKVP
                     GPFVRVRVGDTIDIHLKNSADSAMIHSVDFHAVTGPGGGAAALQVDPGHEKSMTWKAL
                     VPG"
BASE COUNT          516 a         1053 c         1003 g          455 t
ORIGIN      
        1 tcgctgccgc gacgtcgacg acgacctggc ccgccgccgc aaccgggtcg ggcaaatcgc
       61 cgtactgcaa gacctccgga ccgccgaact gctcgatata ggccactttc atgcttgcca
      121 tcctttcgcg cgccgcggca gatgcgagcg ccgcggacgc cgtgcttcac gatctgatct
      181 gcgccccggc atgggcgctg gtcgccgttc gaagaggata tcccatgacc gacacgaagg
      241 gagtgccgat ccggcgcctc aacccgcccg aactcggctc cccgcccggc tattcgcaga
      301 tcgtcgaagt gcgcgccagc cgcatcgtgt tcatcgccgg gcagatcgcg ctctatcgcg
      361 acggcgtgct ggtaggcaag aacgactttg cggcgcaggc cgagcaggtc tttcgcaacc
      421 tgggcatcgc cctcgaaacg gtcggctgca cggcgagcga cctggtgaaa ctcaccgtct
      481 tccttcgcga catgggccaa ttggcggcct atcgggaagc gcgcgatcgc ttctttgcga
      541 ccgtgacgcc gcctgccgcg ccggccgtca ctttggtcga ggtgtcgaaa ctctacggtt
      601 cggatttttt gatcgagatc gaggctgtgg ccgcaagcgc cacgtagcgc ctagccgcga
      661 tcggcgccag cgggggcgac atgccgcacc gacgcggcga tcgcgagcag gtcagcggcg
      721 actgccgggt actttgccgc gagttcgtcg aggtcgccga tttccacgtc ggccggcacc
      781 acgcccggcc actccgtgct cgcacccagg aaccagcggc ggcgcccgac gagccgtgca
      841 gtgtggaacg tgttgccggg gatcagctgc tgcacgcgct ggccgccgcg aaggtccggg
      901 ccgacgatga cccgctcgct gcggccgtcg gcgtgcagca ggaacagttc gatcgggtcg
      961 ccgagatagt aatgatagag ctggtcgttg cggatgcggt gcagtcgcac cggcgcgacc
     1021 ggcgtcacca tgaagtagag cgcggagccg agcggccgcc cgtcggcgaa cggcgccggc
     1081 aggccgccag cggcgatcga ctgcttgctc acgaacgtca cgcgcacgaa gccgcaggtg
     1141 gcattgggtt caagctgcag cagcgtgcga atctcgtccg cgctcagatc attgctcatg
     1201 gccgccaccc tggtcttcgc cgccggcgtc gccttccgcg agatctgcgc gttggccgcg
     1261 cgcgcgggcg tcagcgccgc gacgccgaga agcgccgcgg cctcgagaac gcgccggcgg
     1321 ccgatggcgc gcgaaggagc tttcttcacg cctgcctcct ggtcgcgagc ctagcgccac
     1381 gggcttggtg ggcgcaaatt cgccgcgcat atcccgaccg ctttgacttg aatcgattgc
     1441 ggcgcataca acgcggcgtg aatgacgccg cactgtttcc cggggaaacg aacaatgtgg
     1501 agagcggtaa gggaatggta catcgtcggc atcgggctgc tgctcattgc cggaggcctg
     1561 gccctcgccg cgcaccagag ttcgccgccc gcagcggtca atcaagcggc cggcacggcg
     1621 ccagaccaga cgacgcccgc tcctaaaacc gctacccgaa ctgcgcagca ggcggcgccc
     1681 ggcaccgcga gcgggattcc cgcgccacgc gtgacggctg cggctgtgcc ggccgggcag
     1741 tctcccgtat ctaccgcacc cgcagcgcca gccgcggttg ccgctgcgca gacgacggca
     1801 gcgagcccgg cacccttatc gcacgatcac gcgacggcga gcgccgcatc agagacgagc
     1861 gcacaagcgc tgccgacgcc aagcgcgagc ccggcgagcg gcggcgatcc ggtcgccggg
     1921 cggctcgtgt tcagaaaatg ccaagcgtgc cactcgctcg aacccggcaa gaatatcctc
     1981 ggcccatcgc tcgccggcat catcggccga aaagccggcg ccgagcctgg ctattcctat
     2041 tcgccggcgc tgaagcaggc ggatatcctc tgggacggca agacgctcga ttcctatctc
     2101 gccgatccgc agaaaatggt tcccgggaac aagatgccgt ttccgggtct caagaccgaa
     2161 cacgaccgcg ccgacgtgat tgcgttcctc gccccgccga caggcggcgc gcaaccggcc
     2221 gcagccgcac cgagcgcagc gcggcaagac gcgccggcgc ctgcggcggc agccgggcag
     2281 caacccgccg caacagacca agcgcggcag agcccgccga gttcggacat cggttacatc
     2341 gccgacgcca agtacacatt gcgctcgggc attgccgagg gccgcatggt ctatatcggc
     2401 gttggcggag cgatcgaggg gaaggtcaat ccgttgttga ctgcggcgga aggtcaggtg
     2461 gtccagctca ccttgatcaa tggcgagggt gccgagcacg atatcatctt tcccgaccag
     2521 gatgcgaaat cgccgcgcgt gaccggaaaa ggcgcgagca cgacgatcgc tctccgcgcc
     2581 accaagtccg gcgacttcat ctatttctgc agcgtgcccg gacgccaact cgcgggcatg
     2641 caggggcagt tcatcgttac gccgcggccg gcgccgcaag cggtggtcga agccgacatt
     2701 tcgcgcgagc ccgacgacct gccgccgccg atcgccaggc gcgagccgca gagcgtgcgc
     2761 gtcgacctgc ttagcgtcga ggtcgagggc cgattggccg aggccatcac cttcggatac
     2821 tggacgttca acggcaaggt cccggggccc ttcgtccgcg tgcgcgtcgg cgacaccatc
     2881 gacatccatc tgaagaattc cgccgacagc gccatgatcc attcggtcga cttccacgcc
     2941 gtcaccggcc cgggcggcgg tgccgccgca ttgcaggtcg atcccggcca tgagaaatcg
     3001 atgacctgga aggcgctggt gccgggc
//
LOCUS       DATMQB010000463         7163 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4572815, whole genome shotgun sequence.
ACCESSION   DATMQB010000463 DATMQB010000000
VERSION     DATMQB010000463.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 7163)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7163)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7163
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4572815"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..242)
                     /locus_tag="VNY79_13415"
     CDS             complement(<1..242)
                     /locus_tag="VNY79_13415"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007604011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004590 - orotidine-5'-phosphate
                     decarboxylase activity [Evidence IEA];
                     GO_process: GO:0006207 - 'de novo' pyrimidine nucleobase
                     biosynthetic process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine 5'-phosphate decarboxylase / HUMPS
                     family protein"
                     /protein_id="HWX73493.1"
                     /translation="MQPRDRLIVALDLPSVEAAQAMVSRLGDAVSFYKIGYQLAFAGG
                     LAYAQALAGAGKRVFLDLKLHDIGNTVAQGVKSVSRL"
     gene            complement(263..853)
                     /locus_tag="VNY79_13420"
     CDS             complement(263..853)
                     /locus_tag="VNY79_13420"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011155904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0010181 - FMN binding [Evidence IEA];
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HWX73494.1"
                     /translation="MRPKILIIAASLRAGSHNARLAALAAKELTLAEADVTRISLADY
                     ALPIFDADLMADSGLPPPAIELKRMLTAHRGVFIATPEYSASVPPLLKNAIDWMSRGH
                     ERGEPSYAAYKGRVFAVGAASPAAAGGLRALIALRQILELGCGALVIPEQLTVGRAAE
                     AFDDMDNLKDESQAATLKRLARRLVEMAALMPRGPE"
     gene            complement(887..1477)
                     /locus_tag="VNY79_13425"
     CDS             complement(887..1477)
                     /locus_tag="VNY79_13425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase"
                     /protein_id="HWX73495.1"
                     /translation="MRQFERKRGIRIDDEVRFIRSWIERPLTIGAVTPSGKILARTMA
                     RYVDPDSNGPVVELGPGTGPVTEALVRAGVAPSRLVLVEFDASFCRILRSRFPDATLV
                     QGDAYSLRRLLEALLLQPAAAVVSGLPLVTKPLKMRLRLIRDAFDLMLPGAPFVQFTY
                     SVASPLPRRLGGFSVEASERIWMNIPPARVWVYRKH"
     gene            complement(1716..2867)
                     /gene="dnaJ"
                     /locus_tag="VNY79_13430"
     CDS             complement(1716..2867)
                     /gene="dnaJ"
                     /locus_tag="VNY79_13430"
                     /EC_number="1.8.4.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA];
                     GO_process: GO:0009408 - response to heat [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HWX73496.1"
                     /translation="MMVKRCYYETLSIERTASDGDIKVAFRKQAMQWHPDRNPGDKDA
                     EHRFKELNEAYEVLKDPDKRAAYDRFGHAAFEHGGMGGAAHGFGADFGTTFSDLFEGI
                     FGMSAGRGRGSGRERGADLRYNMEITLQEAYAGKAAQIRIPTSVTCEACSGSGARSGT
                     KPKACPMCAGHGKIRHSQGFFTLERTCPNCQGRGQVIDNPCGSCAGSGRVTRERMLSV
                     NIPSGVEDGTRIRLAGEGEAGVRGGPAGDLYIFLSIGAHPFFQREGADLHCRVPVSMV
                     TAALGGDFEVPTIDGGKTRVKVPEGTQSGCRFRLQGKGMPVLRARQTGDMYVQVAVET
                     PQNLSKKQRELLAEFDRLSSEETQPEASGFFGKVKEFLDGLSASRANSA"
     gene            complement(2993..4909)
                     /gene="dnaK"
                     /locus_tag="VNY79_13435"
     CDS             complement(2993..4909)
                     /gene="dnaK"
                     /locus_tag="VNY79_13435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012169221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_process: GO:0006457 - protein folding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HWX73497.1"
                     /translation="MAKVIGIDLGTTNSCVAVMEGKAPKVIENAEGMRTTPSIVAFTD
                     EGERLVGQPAKRQAVTNPERTIFAVKRLIGRRYDDPMVEKDKKLVPYKIVRASNGDAW
                     VEAEGKSYSPSQISAFILQKMKETAEAYLGSKVEQAVITVPAYFNDAQRQATKDAGKI
                     AGLEVLRIINEPTAAALAYGLDKGKTGTIAVYDLGGGTFDISILEIGDGVFEVKSTNG
                     DTFLGGEDFDMRLVNYLADEFQKEQGIDLRRDKLALQRLKESAEKAKIELSSTTQTEI
                     NLPFITADASGPKHLTMKLTRAKFEALVDDLVRKTIEPCRQALKDAGLSAAEINEVVL
                     VGGMTRMPKVQEVVKQLFGKEPHKGVNPDEVVAVGAAIQAGVLQGDVKDVLLLDVTPL
                     SLGIETLGGVFTRLIDRNTTIPTKKSQVFSTAEDGQTAVTIRVFQGEREMAADNKMLG
                     QFDLIGIPPAPRGIPQIEVTFDIDANGIVNVSARDKGTGKEQQIRIQASGGLSEADIQ
                     RMVKDAEAHAEEDKKRKAQVEAKNHAEALVHSTEKTLAEHGSKIGDGDRRAIENAIAD
                     LKEALKGDDADAITAKTNVLAQASMKLGEAMYKQSAEQPAGDAGAGPDGKKEDVVDAE
                     FTEVDDDKKNKKSA"
     gene            5240..5878
                     /locus_tag="VNY79_13440"
     CDS             5240..5878
                     /locus_tag="VNY79_13440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoglutarate-dependent dioxygenase AlkB"
                     /protein_id="HWX73498.1"
                     /translation="MDATTDITGLRVYPGYLDGDRQWAVLAAIEEVLMTAPLATPRMP
                     KSGRPFTVLMSNCGPLGWTSDESGYRYQPMHPETGRPWPPIPAPVAAIWDAVARYAHA
                     PECCLINFYAPTAKMGLHQDRDEQEFHAPVVSISLGDSCLFRVGGRQRRDPTRSFRLN
                     SGDVVVLGGGARLAFHGVDRIYAGTSTLLRQGGRINLTMRRVTAPAAERAGG"
     gene            5904..7091
                     /locus_tag="VNY79_13445"
     CDS             5904..7091
                     /locus_tag="VNY79_13445"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73499.1"
                     /translation="MRNRRFRSITAGAGLAVLLLSLVLATPSRAAEPAFPPGSRIGLV
                     PPTGMVISDAFAGFADPEKNAAILIATLPAAAYSQLDKTLDTEELRKQGITLEKREPM
                     RLDAGKGFLLTGRQVAGKERYRKWLLVLASGDITALVSVQVPESDTAYPNNIVRTALA
                     TLAVRQKVPEQEQLGLLPFTVGDLAGFRVDAVLPGRALVLSAAAAETPKDTSKESEEA
                     PKEPKEAKDSKEAPKDTSKEAPKEPKDAKDSKDGPKETSKEESKAPKEAKDSKEAAKD
                     SSKEAAARSFDARLLIAAAPGGPAEADDRGSFARTSFAEIGGIRDVRITMSEPLRIGG
                     QSGYQTMAEAKDARSGADLMVVQWLRFGSGGFLQMTGIARADAWTSTLSRLRAVRDSV
                     QPK"
BASE COUNT         1199 a         2399 c         2301 g         1264 t
ORIGIN      
        1 agccgcgaca cgctcttgac gccttgcgcc accgtgttgc cgatgtcgtg cagcttgaga
       61 tcgaggaaca cgcgcttgcc ggcgccggca agcgcctgcg cataggcaag cccgccggca
      121 aaggcgagct gatagccgat cttgtagaac gacaccgcat cgccgagccg cgacaccatg
      181 gcctgcgctg cttccaccga gggcaggtcg agcgcaacga tcaggcggtc gcgtggctgc
      241 aggcgcgtgg cttctgcctg tttcactccg gccctcgcgg catgagcgcc gccatctcga
      301 cgaggcggcg cgcgaggcgc ttcaacgtcg ccgcctggct ctcatccttg agattgtcca
      361 tgtcgtcgaa cgcctcggcg gcgcgcccga cggtaagctg ttcggggatg acgagcgcgc
      421 cgcagccgag ctccaggatc tgccgcagcg cgatcagcgc ccgcaagccg ccggccgccg
      481 ccggcgaagc cgccccgacg gcgaagacgc ggcccttata cgcggcgtag ctcggctcgc
      541 cgcgctcgtg tccgcgcgac atccagtcga tcgcgttctt gaggagcggc ggcaccgaag
      601 cgctgtattc cggcgtggcg atgaacacgc cgcgatgcgc cgtgagcatg cgcttgagct
      661 cgatcgcggg gggcggcagg ccgctgtcag ccatcagatc ggcatcgaag atcggcaacg
      721 cgtagtcggc gagggaaatg cgagtgacgt cggcctcggc gagcgtgagc tccttggcgg
      781 cgagcgcggc aagccgggcg ttgtgcgagc cggcgcgtag cgaggcggcg atgatcagga
      841 ttttcggacg catggaatgt cggatgccga ggtctgtcgt ccgccgtcag tgcttccgat
      901 agacccagac gcgcgccggc gggatgttca tccagatgcg ctcggaggcc tccaccgaga
      961 agccgccgag gcgccgcggc agcggcgagg caaccgaata ggtgaactgc acgaacggcg
     1021 cgccgggcag catgagatcg aaggcgtcgc gaatgagccg caagcgcatc ttgagcggct
     1081 tggtgaccag cggcagcccg gaaacgactg cagcggcggg ttgcagcagc agcgcttcca
     1141 gcaatcggcg cagactgtag gcgtcgccct gcaccagcgt cgcgtcgggg aagcgcgaac
     1201 gcaggatgcg gcagaaactc gcgtcgaact cgacgagaac gaggcgcgac ggcgcgacac
     1261 ccgcccgcac cagcgcttcg gtcaccgggc cggtgcccgg cccaagctcg accaccggtc
     1321 cgttgctgtc cggatcgaca tagcgcgcca tggtgcgcgc cagaattttt cccgaaggcg
     1381 tcaccgcgcc gatcgtcagc ggccgctcga tccacgaacg gatgaagcgc acctcgtcat
     1441 cgatccgaat gccgcgcttg cgctcgaact gccggatctg ctcttcgatc ttcttgccga
     1501 tgccgccgcg cttctcttcg agcacgcgga tctggcgttc gatcttgcgc tcgatgacga
     1561 tcttcctgac ctccagaagc cggagctggc gctcaatccc tcgttcaaat ttctgcaggg
     1621 ccgggagcgg catggcatca atcgcatacg accaaacaat gcttgttcta gaacattcac
     1681 cgacccaagg ccagcggggc cccggatcgg gacctttatg cggaattcgc gcggctcgcg
     1741 ctcaatccgt cgagaaattc cttgaccttg ccgaagaagc ccgacgcctc gggctgcgtt
     1801 tcctccgacg acaggcggtc gaattcggcc agcagctcgc gctgcttctt gctgagattc
     1861 tgcggcgtct cgacggcgac ctgcacgtac atgtcgccgg tctgccgcgc ccgcagcacc
     1921 ggcatgcctt tgccctgcag gcggaagcgg cagcccgact gcgtgccttc cggaactttg
     1981 acgcgggtct tgccgccatc gatcgtcggc acctcgaagt cgccgccgag cgccgccgtc
     2041 accatcgaga ccggcacgcg gcagtgcagg tcggcgccct cgcgctggaa gaacggatgc
     2101 gcgccgatgg aaaggaagat gtagagatcg ccggccggcc cgccgcgcac gcccgcctcg
     2161 ccttcgccgg ccaggcggat gcgggtgccg tcctccactc cggacggaat attgaccgac
     2221 agcatgcgct cgcgcgtgac gcggcccgag ccggcgcagg agccgcacgg attgtcgatg
     2281 acctggccgc ggccctggca gttcggacag gtgcgttcga gggtgaagaa gccctgcgag
     2341 tggcgaatct tgccgtggcc ggcgcacatc gggcaggcct tcggcttggt accggacctg
     2401 gcgccgctgc cggagcacgc ctcgcaggtg accgaggtcg ggatgcggat ctgcgcggcc
     2461 ttgccggcgt atgcctcctg cagcgtgatc tccatgttgt agcgcaaatc cgcgccgcgc
     2521 tcgcgtccgg agccgcggcc gcggccggcc gacatgccga aaattccttc gaacagatcg
     2581 gaaaacgtcg tgccgaaatc agcgccgaaa ccatgcgcgg cgccgcccat gccgccgtgc
     2641 tcgaaggcgg cgtggccgaa acggtcgtag gccgcgcgct tgtcggggtc tttgaggacc
     2701 tcgtaggcct cattcaattc cttgaaacga tgctcggcgt ccttgtcgcc gggattgcga
     2761 tccgggtgcc actgcatcgc ctgcttgcga aaggcgacct tgatgtcgcc gtcgctcgcc
     2821 gtgcgttcaa tcgaaagcgt ctcgtagtag cagcgcttga ccatcactcc ccacccgatg
     2881 acgtccaatc atttcgagct gagacgccta ccgccaaaaa cgtgcacccc cgtcttgcgt
     2941 ccgggggtgc aattctgacg gaccgtagcg gcattgaagc gcctccgccc gatcaagcgg
     3001 acttcttgtt cttcttgtcg tcgtccacct cggtgaactc ggcgtcgacc acgtcctcct
     3061 tcttgccgtc cgggccggct ccggcgtcgc cagccggctg ctcggccgat tgcttataca
     3121 tcgcctcgcc gagcttcatg gaggcttgcg ccagcacatt ggtcttcgcc gtgatcgcgt
     3181 ccgcatcgtc gcccttcaag gcttccttga ggtcggcgat ggcgttctcg atcgcgcgcc
     3241 ggtcgccgtc gccgattttc gaaccgtgct cggcgagcgt cttctcggtc gaatggacca
     3301 gagcctcggc gtgattcttc gcctcgacct gcgccttgcg cttcttgtcc tcctcggcgt
     3361 gagcttccgc atccttgacc atacgctgga tgtcggcctc ggacaggccg cccgacgcct
     3421 ggatgcggat ctgctgctcc ttaccggtgc ccttgtcacg ggccgagacg ttgacgatgc
     3481 cgttggcgtc gatgtcgaag gtcacctcga tctgcggaat gccgcgcggc gccggcggga
     3541 tgccgatgag gtcgaactgg ccgagcatct tgttgtcggc cgccatctcg cgttcgccct
     3601 ggaacacacg gatcgtcacc gcggtctggc cgtcctcggc ggtggagaac acctggctct
     3661 tcttggtcgg gatcgtggtg ttgcgatcga tgagccgcgt gaacacgccg cccagcgtct
     3721 cgatgccgag cgacagcggg gttacgtcga gcagcagcac gtccttgacg tcgccctgca
     3781 ggacgccggc ctggatcgcc gcgccgaccg ccacgacctc gtccggattg acgcccttgt
     3841 gcggctcctt gccgaacagc tgcttcacca cttcctggac cttgggcatg cgggtcatgc
     3901 cgccgaccaa aaccacttcg ttgatctcgg cggcggagag accggcatcc ttgagcgcct
     3961 gtcggcacgg ctcgatcgtc ttgcgcacca ggtcgtcgac cagcgcctcg aacttggcgc
     4021 gggtaagctt catggtcaga tgcttcggtc ccgaggcatc cgcggtgatg aacggcaggt
     4081 tgatctcggt ctgggtcgtc gaggaaagct cgatcttggc tttctccgcc gattccttga
     4141 gccgctgcaa agcgagcttg tcgcggcgca ggtcgatacc ctgctccttc tggaattcgt
     4201 cggccagata gttgaccagc cgcatgtcga aatcctcgcc gccgaggaag gtgtcgccgt
     4261 ttgtcgactt cacctcgaac acgccgtcgc cgatttcgag aatggaaatg tcgaacgtgc
     4321 cgccgccgag atcgtagacc gcaatcgtgc cggtcttgcc cttgtcgagc ccgtaggcga
     4381 gcgccgccgc ggtcggctcg ttgatgatgc gcaacacttc caggccggcg atcttgccgg
     4441 catccttggt ggcctggcgc tgcgcgtcat tgaaataggc gggcaccgtg atgaccgcct
     4501 gctcgacctt gctgccgaga taggcctcgg cggtctcttt catcttctgc aggatgaagg
     4561 cggaaatctg cgagggcgaa tagctcttcc cctcggcctc gacccaggcg tcgccattcg
     4621 aggcgcgcac gatcttgtag gggacgagct tcttgtcctt ctccaccatc gggtcgtcgt
     4681 agcgccgccc gataagacgc ttgactgcaa aaatggtgcg ctcgggattg gtcaccgcct
     4741 ggcgcttcgc cggctgaccg acgagccgct cgccctcgtc cgtaaaagcg acgatcgacg
     4801 gcgtcgtgcg catcccctcc gcgttctcga tgaccttggg cgccttgccc tccatcacgg
     4861 cgacgcagga attcgtggtc ccgagatcga tcccaatgac cttggccatg gttattattc
     4921 ctctccttag cggcaggtcg ggtaggcccc aacggcgccc ctccccgacc cccttcagtt
     4981 ctcaccgtac ccggcgcgat ttccgggcaa tttcccttgg ctcatatagg agggcgtgat
     5041 caggccgcaa gacaagattc cctcgcagcg atacgccagg attaaacaat cgcgcgccag
     5101 cggtggggct tttcggactg cgcctccacg gtgaaccacg ggttgattgc cgatccgcgc
     5161 aggtataggc cgtctccgcc gaccgcgcgc tcttggcacg ctcttggggc gcttcttggt
     5221 agggaatgaa agcgcaaaaa tggacgcgac gacagacatc accggactgc gcgtctatcc
     5281 cggctatctc gacggcgacc gccagtgggc ggtgctggcg gcgattgaag aggtcctgat
     5341 gacggcgccg ctcgccacgc cgcggatgcc gaaatccggc cgtccgttca ccgtgctcat
     5401 gtcgaattgc gggccgctgg gttggacctc ggacgagagc ggctaccgct atcagccgat
     5461 gcatccggag accggccggc cctggccgcc gataccggct ccggtcgccg ccatatggga
     5521 tgcggttgcg cgatacgcgc acgcgccaga gtgctgtctc atcaacttct acgccccgac
     5581 cgcgaaaatg ggcttgcacc aggatcgcga cgagcaggaa ttccatgctc ccgtggtctc
     5641 gatctcgctt ggcgattcgt gcctgttccg cgtcggcgga cgacaacgcc gcgaccctac
     5701 ccgctccttc cggctcaatt ccggcgacgt cgtcgttctc ggcggcggcg cgcggcttgc
     5761 attccacggc gtcgatcgga tctatgccgg aacatcgacc ttgctccggc aggggggacg
     5821 gatcaatctc actatgcgcc gggttacagc tcccgcagcc gagcgggccg gcggataagt
     5881 gcccactgca gaggctccac acgatgcgca acagacgttt ccgctcgatc acggccggcg
     5941 ccggcttggc agttctgttg ctgtcgttgg tcctggcgac gccgtcccgc gcggccgagc
     6001 ccgcattccc tccaggctca cgcatcggcc ttgtgccgcc gaccggcatg gtcatcagcg
     6061 atgcctttgc cggcttcgcc gatccagaaa agaatgcggc catactgatc gcgacgttgc
     6121 cagcggcggc gtattcgcag ctcgacaaga cgctcgacac cgaggagctg cgcaagcagg
     6181 gcatcaccct ggagaagcgc gagccgatgc ggcttgacgc cggcaagggg tttcttctga
     6241 ccggccggca ggtggccggc aaggaacgct atcgcaaatg gcttctggtg ttggcgtccg
     6301 gcgacatcac cgcactggtc agcgtccagg ttcccgagtc ggacaccgcc tatcccaaca
     6361 acatcgtgcg gaccgcgctc gccacgctgg cggtgcggca gaaggtgccc gagcaggagc
     6421 agcttggact cctgccgttt acggtcggcg acctcgccgg cttccgcgtc gacgccgtcc
     6481 ttccaggccg cgccctggtc ttgagcgcgg ccgccgcgga aacgccgaaa gacacttcca
     6541 aggaatccga ggaagcaccg aaagagccca aggaagcaaa ggactccaag gaagctccga
     6601 aagacacttc caaggaggca ccgaaagagc ccaaggacgc gaaggactcc aaggacggtc
     6661 cgaaagagac ctccaaagaa gagtcgaaag cacccaagga agcgaaggac tccaaggaag
     6721 ctgcgaaaga ctcttccaag gaggcagccg ctcgcagttt cgacgcgcgc ctgctgatcg
     6781 ctgctgcgcc cggcgggccg gcggaagcgg atgaccgcgg cagtttcgcc cgaacctcgt
     6841 tcgccgagat tggcggaatc agggatgtcc gcatcacgat gtcggagccg ctgcgcatcg
     6901 gcggacaatc gggatatcag accatggcgg aagccaagga cgcgcgcagc ggagccgatc
     6961 tgatggtggt gcaatggctg cgtttcggca gcggcgggtt tctgcagatg accgggatcg
     7021 cgcgcgccga cgcatggacc agcacgctct cgcggctgcg cgccgtccgc gacagcgttc
     7081 agccgaagtg agcccggcga tccaggccgc cgcgagggcg aacgcgccaa atacgcccta
     7141 ttgcgcaaag cccggcatcg ggc
//
LOCUS       DATMQB010000464         5225 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4573184, whole genome shotgun sequence.
ACCESSION   DATMQB010000464 DATMQB010000000
VERSION     DATMQB010000464.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5225)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5225)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5225
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4573184"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(384..1502)
                     /locus_tag="VNY79_13450"
     CDS             complement(384..1502)
                     /locus_tag="VNY79_13450"
                     /inference="COORDINATES: protein motif:HMM:NF013630.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HWX73500.1"
                     /translation="MGLAVVLGVGGLLGGCGYDQVVHTWVAYSEESSVPEGPKLPGHM
                     YLVRGLTSVYSFGIDQLAAKINHRGVTATVYSLSETGTIANDIARKYKAGEERGPIML
                     LGHSSGADYAIAIAERLKEAGVPVALAFGFDPTRTAAAVPGNVELFINLYQGANIIGG
                     GEVQPGRDFRGRLIDVDLREHTEIVHITLDKTPAVQDAVADKVIAVAAYAARHPKEPP
                     PRRPAGAEIRPLLLKYTVPGSAPIVLWDDAVQVKVKSGDTLETIASTDRAPSWAIAQI
                     NKLDADRPLEPGRTLIIPRSLYANVAPPAAASPTAARPAAPPVARLAPKPPPQAEAPA
                     GSAPAPAPAAANAPKPAEAPPARDTNSFSDRWRSGTEH"
     gene            complement(1673..2728)
                     /locus_tag="VNY79_13455"
     CDS             complement(1673..2728)
                     /locus_tag="VNY79_13455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011441840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="lysine-2,3-aminomutase-like protein"
                     /protein_id="HWX73501.1"
                     /translation="MKPVKAVKPPTSTTLRTVEELCDHALVPREWMPALAKVAARYAV
                     AITPAIAGLIDPSDPHDPIAKQFVPDARELAARPQERGDPIGDDAFSPVEGVVHRYPD
                     RVLLKLVNACAVYCRFCFRREMVGPGRGGLSARALAAALDYIRGRPQIWEVILSGGDP
                     LVLSPRRLKDAVARIAAIAHVKVIRVHTRVPVVAPERITAALVRALRTPKATYVVLHA
                     NHPRELTEQARAACARFVDAGMPMLSQSVLLRGVNDDAETLGALMRAFVECRIKPYYL
                     HHADLAPGTAHLRTTIAEGQALMRALRGRYSGLCQPAYMLDIPGGHGKSPVGPNYVSG
                     NGAEIEDFRGRRHRYRP"
     gene            complement(2725..3780)
                     /gene="epmA"
                     /locus_tag="VNY79_13460"
     CDS             complement(2725..3780)
                     /gene="epmA"
                     /locus_tag="VNY79_13460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009491021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004824 - lysine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006430 - lysyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="EF-P lysine aminoacylase EpmA"
                     /protein_id="HWX73502.1"
                     /translation="MPELAPAASPFWAPQVHADRRPVLMARARIVAALRSWFTAHDFV
                     EVETGALQVSPGNETHLHAFATALEGPDGASAQFYLRTSPEFACKKLLAAGERRIVEF
                     AKAFRNRERGALHHPEFTLVEWYRAGEPYEALMADCAAILAESATAAGTKHLTFRGRA
                     AEAFAEPERLTVAAAFERFAGLDLLATLPAEPDGEPDRDAFAHAARAVGIRVAEDDRW
                     GDIFSRVLVEKIEGHLGIGRATILDGYPAGQAALARPARDARVAERFELYACGVELAN
                     GFAELTDAAEQRRRLEREMAEKARLYGERYPFDEDFLAALAMMPPACGIALGLDRLVM
                     LVTGAARLDEVLWNPLP"
     gene            3875..4441
                     /gene="efp"
                     /locus_tag="VNY79_13465"
     CDS             3875..4441
                     /gene="efp"
                     /locus_tag="VNY79_13465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019197229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003746 - translation elongation factor
                     activity [Evidence IEA];
                     GO_process: GO:0006414 - translational elongation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HWX73503.1"
                     /translation="MRVIASSLRKGNIVEIEGKLGVIVSAENIHPGKGTPVTQLDVRR
                     IADGVKVSLRYKTTDQVERAFVEDRKHQYLYHDGDGFHFMNMESYDQVALPADIIGEQ
                     AAYLQPEMEVTISLHDGVPVAIELPPRAVLEVVETEPTVKGQTAASSYKPALLSNGVR
                     TMVPSFVTTGTKIVVATADGTYVERSKE"
     gene            complement(4468..>5225)
                     /locus_tag="VNY79_13470"
     CDS             complement(4468..>5225)
                     /locus_tag="VNY79_13470"
                     /inference="COORDINATES: protein motif:HMM:NF041278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="CmcJ/NvfI family oxidoreductase"
                     /protein_id="HWX73504.1"
                     /translation="KLFTETGGPGGLDRRSGGTVDPRQVVIHNGRPHVQEFALERDGF
                     RFVRHDTKVADFFDEDEVRRVYYPEMEALVKAESGAARVVVFDHTLRTADDEMRAQRK
                     IREVVPRVHNDYTEWSGPQRVRDILPEEADTLLARRFAIIQVWRPIRLPVESFPLAIC
                     DARSVSFDDLVISERRYPKRVGQTYAITYNPKHKWFWFPRMRREEAIVFKVFEALKDG
                     RARWTAHTAFDDPTSPPSARPRESIEIRTLAFF"
BASE COUNT          892 a         1730 c         1786 g          817 t
ORIGIN      
        1 tggtccgaac atctcagcga gcgctgcgtg cgccacgcct ggtcgtgtga agcctgcggt
       61 tacgaattcg agacggcggt cttcttttcc acgcccgccg aggcttgatc ggaaaacagc
      121 ggcgttccga aaagacttcg ctgcggccga gcggcgtgag cgttcattga accgtgtcgt
      181 cggcgcctag tcgcgcgcat ccacgcggtc gctgctgcgc caacaaacgt ggaagggcgg
      241 gaacgggtgt gatcgtgccc cgaaacgccg aaccatcgca ttcaactcaa tctgatccaa
      301 acaaaaccac agcgtcatcg ctcgaacttg acgcgaagcg atgcgctccg gttccgcacg
      361 tattccatca acggtggatc aggctagtgc tccgtgccgg agcgccatcg gtcgctgaac
      421 gagtttgtgt cgcgcgccgg cggcgcttcg gctggtttgg gagcattcgc cgccgcgggt
      481 gccggggccg gagcgcttcc ggcaggggct tcggcttgcg gcggcggctt cggcgcgagg
      541 cgcgcgaccg gcggtgctgc cggacgcgcg gcggtcggcg atgcagcggc gggcggcgcc
      601 acgttggcat agaggctgcg gggaatgatc agcgtgcggc cgggctcgag cgggcgatcc
      661 gcatcgagct tgttgatctg cgcgatggcc caggacggcg cgcgatcggt cgaggcaatc
      721 gtttcgagcg tgtcccccga cttcaccttc acctgaaccg cgtcatccca caacacgatc
      781 ggtgcgctgc ccggcacggt atatttgagc aacagcggcc ggatttcggc gccggccggg
      841 cgccgcggcg gcggctcctt cgggtgccgt gccgcatacg cggccacggc aatgaccttg
      901 tccgccacgg cgtcctgcac cgccggcgtc ttgtcgagcg tgatgtggac gatctcggtg
      961 tgctcgcgca gatcgacgtc gatcaagcgc ccgcggaaat cgcgacccgg ctgcacctcg
     1021 ccgccgccga tgatgttggc gccctggtag agattgatga acagctcgac attgcccggc
     1081 accgcggcgg cggtgcgggt cggatcgaag ccgaaggcca gcgccaccgg cacaccggcc
     1141 tccttcagcc gttcggcgat ggcgatggcg tagtcggcgc cgctggaatg cccgagcagc
     1201 atgatcgggc cgcgttcctc gccggccttg tatttgcggg cgatgtcgtt cgcgatcgtg
     1261 ccggtttcgg ataggctgta caccgtcgca gtcacgccgc gatgattgat tttcgcagcg
     1321 agctggtcga ttccgaacga atagacgctg gtcaggccgc gcaccagata catgtgcccg
     1381 gggagtttgg gcccctccgg gacgctcgat tcctccgaat aggcaaccca agtgtggacg
     1441 acctgatcat acccgcagcc gccgaggagc ccgccgacac cgagcacgac cgcaaggccc
     1501 aacagtctgg atcgtagcct tcctcgattc cccatgtcgg acgccaattg cgctttcgat
     1561 cggcgtggcg gacagcgcgc tcccccaagc cgcagccacc ggcgaaaagc taacatcgtg
     1621 gatcgggcac cgtcaaaacc agttcatgga acccgcaagc gcgtcggccc ccttagggcc
     1681 gatagcggtg tcgccggccg cggaaatcct cgatctccgc gccgttcccg ctcacatagt
     1741 tcgggccgac cggcgatttg ccgtggccgc cgggaatatc gagcatgtag gccggctggc
     1801 agaggccgga atagcggccg cggagcgcac gcatcaacgc ctgtccttcg gcgatggtgg
     1861 tgcgcagatg cgcggtaccc ggcgcgaggt cggcgtgatg cagatagtag ggcttgatcc
     1921 ggcactcgac gaaggcgcgc atcagcgcgc ccagcgtctc ggcgtcatcg ttcacgccgc
     1981 gcagcaacac cgactgcgaa agcatcggca tgccggcatc gacgaagcgc gcgcacgccg
     2041 cgcgcgcttg ttcggtcagc tcgcgtggat gattggcgtg gaggacgacg tacgtcgcct
     2101 tcggcgtacg cagggcccgc accagcgcgg ccgtgatccg ttccggcgcc acgaccggaa
     2161 cgcgcgtgtg cacgcggatc accttcacgt gcgcgatggc ggcgatccgc gcgaccgcat
     2221 ccttgagccg gcgcggcgac aggaccagcg ggtcgccgcc gctgagaatg acctcccaga
     2281 tctgcgggcg gccgcggatg tagtcgagcg cggcggcaag agcgcgcgcg gagagccctc
     2341 ccctgcccgg cccgaccatt tcacgccgga agcaaaagcg gcagtagacc gcgcaggcgt
     2401 tgacgagctt gagcaggacg cggtcgggat agcggtgcac gacgccctcg accgggctga
     2461 aagcatcgtc gccgatagga tcgccgcgct cctgtggccg cgcggcaagc tcgcgggcgt
     2521 cgggtacgaa ttgcttggca atgggatcgt gcgggtcgct tgggtcgatc aggcccgcga
     2581 tcgccggcgt gatggcgacc gcgtagcggg cggcgacctt ggcaagcgcg ggcatccatt
     2641 cacgcggcac caaagcgtga tcgcaaagct cctcgacggt acgcaacgtc gtgctggtgg
     2701 gcggcttcac agccttcacg ggcttcatgg cagaggattc catagcacct cgtcgaggcg
     2761 cgcggcgccc gtcaccagca tgaccaggcg gtcgaggccg agcgcgatgc cgcaggccgg
     2821 cggcatcatc gccaaggcgg cgagaaaatc ctcatcgaac ggatagcgct cgccgtagag
     2881 gcgcgccttc tctgccatct cccgctcaag acggcggcgc tgctcggcgg cgtcggtcag
     2941 ctcggcgaaa ccgttagcga gctcgacgcc gcaggcataa agctcgaagc gctcggcgac
     3001 gcgcgcatcg cgcgccggcc gcgccagcgc cgcctgcccg gcgggatagc cgtcgagaat
     3061 ggtggcgcgg ccgatgccga gatggccctc gatcttctcg accagcacgc ggctgaaaat
     3121 gtcgccccag cgatcgtcct cggcaacgcg aatgccgaca gcccgcgcgg catgggcgaa
     3181 tgcgtcgcga tccggctcgc cgtccggctc tgcgggcaat gtcgcaagga gatcaaggcc
     3241 ggcgaaccgt tcgaacgccg cggcgaccgt aagccgctcc ggctcggcga acgcttcggc
     3301 cgcgcggccg cgaaaggtga gatgcttcgt cccggcagcg gtcgccgact ccgccaggat
     3361 ggcggcgcag tcggccatca gcgcctcgta cggctcgccg gctcgatacc actcgacgag
     3421 cgtgaattcc ggatgatgca gagcgccgcg ctcgcggttg cggaacgcct tggcgaattc
     3481 gacgatgcgg cgctcgccgg ccgcgagcag cttcttgcag gcgaactccg gcgaggtgcg
     3541 cagataaaac tgtgccgagg cgccgtcggg cccttcgagc gcggtggcga aggcgtgcag
     3601 gtgagtctcg ttgcccggcg agacctgcaa ggccccggtc tcgacctcga cgaaatcatg
     3661 cgcggtaaac caggagcgca aggcggcaac aatacgggcg cgcgccatca gcaccggccg
     3721 ccggtcggcg tgaacctgcg gggcccagaa gggcgaggcg gcgggcgcga gttccggcat
     3781 gtccttgtgc gcgtaaaggc gaggaaatat gtggcgatcg ggctcaggat cgctatgttg
     3841 cgcccggatt tgagccagaa accttgagga aaccgtgaga gtcatcgcca gctcgctgcg
     3901 aaaaggcaat atcgtcgaga tcgaaggcaa gctcggcgtc atcgtgtcgg ccgagaacat
     3961 ccatcccggc aagggcacac cggtgaccca gctcgacgta cgccggatcg ccgacggcgt
     4021 gaaggtctcc ttgcgctaca agaccaccga tcaggtcgaa cgcgccttcg tcgaggaccg
     4081 caagcatcag tacctctacc atgatggcga cggcttccat ttcatgaaca tggaaagcta
     4141 cgaccaggtc gcgctgccgg ccgacatcat cggcgagcag gcggcctacc tgcagccgga
     4201 gatggaagtg acgatcagcc tgcacgacgg ggtaccggtc gcgatcgagc tgccgccgcg
     4261 cgccgtcctc gaagtggtgg agaccgagcc gacagtcaaa ggccagaccg ccgcctcctc
     4321 ctacaagccc gcgctcctct ccaacggcgt gcgcaccatg gtgccgtcgt tcgtcaccac
     4381 cggcaccaag atcgtcgtgg ctaccgcgga cggcacctac gtcgagcggt cgaaggagta
     4441 acgcgcggcg cgccccggaa tgacgcctca gaaaaacgcc agcgtgcgga tttcgatgct
     4501 ctcacgcgga cgcgcactgg gcggcgaggt cgggtcatcg aaggcggtgt gcgccgtcca
     4561 gcgggcgcgg ccgtccttga gcgcctcgaa gaccttgaac acgatcgcct cctcgcgccg
     4621 catgcgcggg aaccagaacc atttatgttt cggattgtag gtgatggcgt aggtctgccc
     4681 gacgcgcttg ggatagcgcc gctccgagat gacgagatcg tcgaacgaga cgctgcgcgc
     4741 gtcgcagatc gcgagcggaa agctctcgac cggaaggcgg atcggccgcc acacctggat
     4801 gatggcgaag cggcgggcga gcagcgtgtc cgcttcctcg ggcaggatat cccgcacccg
     4861 ctgcggcccc gaccattcgg tgtagtcgtt gtgcacgcgc ggcacgacct cgcggatctt
     4921 gcgctgggcg cgcatttcat cgtcggctgt gcgcagcgtg tggtcgaaga cgacgacgcg
     4981 cgccgcgccg ctctcggcct tcaccagcgc ttccatctcc ggatagtaga cgcggcgcac
     5041 ctcgtcctcg tcgaagaagt cggcaacctt ggtgtcgtgg cggacgaagc ggaacccatc
     5101 acgctcgagt gcgaactcct gcacgtgtgg ccggccgttg tggatgacca cctgccgcgg
     5161 atcgaccgtc ccgccgctgc gccggtcgag gccgccgggc ccgccggtct cggtgaacag
     5221 ctttt
//
LOCUS       DATMQB010000465         5193 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3059724, whole genome shotgun sequence.
ACCESSION   DATMQB010000465 DATMQB010000000
VERSION     DATMQB010000465.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5193)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5193)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5193
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3059724"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..483
                     /locus_tag="VNY79_13475"
     CDS             <1..483
                     /locus_tag="VNY79_13475"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX73505.1"
                     /translation="VMLFGVRMSLTRLIALGVALAMVCGVGLLLSRTRIGLGMRALAS
                     DRNISAAIGVRVVQIDSFAWLINGMFAGVAGILLANINRLDPGFLTFLVIPAIAAAIL
                     GRLSSLPGAFIGGMVAGMIEALLVAVPDVANLRSAGPYVAALIFLMIVGAGQGVGARE
                     "
     gene            480..1526
                     /locus_tag="VNY79_13480"
     CDS             480..1526
                     /locus_tag="VNY79_13480"
                     /inference="COORDINATES: protein motif:HMM:NF014684.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX73506.1"
                     /translation="MSEVGATEAIPLAVPAKPEITPGMRAVAIVAVVGVVSGAIAVTS
                     SGYWLSNFTQAYCMTLAVLGCALLYGRLGLVSLCQWALVGVGGWISLRVYHSFHPPFL
                     VTMLAGGAGASVIGMIWGLPALRMRGLYLALVTLMLAGAFQTLVTVTSFPVGGPGFLG
                     QVGASGNDRIMMARPIFAAGDTGYFLFVAVVTLACIFLVEAHRHSKPGRAWALIRKSE
                     QMAIAAGVRIVFYKAWAFALSGFLAGIAGALLAGLFGQLDASAFPPTNSIVIFIGTLL
                     GGYEVWLGAFLGGILTRFIPALLIDLNVNTNVGFMIFGVALLFALRDPLGLGGQLTIL
                     AERLYQKLQAQRAS"
     gene            1523..2230
                     /locus_tag="VNY79_13485"
     CDS             1523..2230
                     /locus_tag="VNY79_13485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003550310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HWX73507.1"
                     /translation="MIKIDALTVQFGGIKALDALDAEFAAPICGLIGPNGAGKTTLLN
                     VLSGFLTPLKGTILLDDIALLGLSARRRVGVGLRRTFQQELVVEELTAVENIQATADH
                     VSPDRASARREVEAALDFVGLDERRNTLGRELNLFQRRMVEIAKTLIGRPRVILMDEP
                     GAGLNEAETERLRRLLAKIPSTFDSQLVLIDHDADLIAAVCMETVVLDFGKRLAMGPT
                     RAVLDDPVVRRAYLGRE"
     gene            2235..2969
                     /locus_tag="VNY79_13490"
     CDS             2235..2969
                     /locus_tag="VNY79_13490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012555526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HWX73508.1"
                     /translation="MTASELTVRNLFVTRGGRPVLRDVSISVPPGEITALLGANGAGK
                     STLVLAIAGVLPALRGDIFCDGVHLMGRSPDAVRRHGVALVLEGHPVLTGLSVRDNLA
                     AAALMHTRSEAEREIEAALEIFPELRDRLPMAAQNLSGGQKQMVVIAQGVISRPRYLL
                     IDELSFGLAPSIVGRLAETIQIIARRGVGILLIEQFTTLALTLAKSALVLERGELAFS
                     GAAEELRRRPEILHGAYLATGKVHPS"
     gene            2990..3814
                     /locus_tag="VNY79_13495"
     CDS             2990..3814
                     /locus_tag="VNY79_13495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019859757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family NAD(P)-dependent oxidoreductase"
                     /protein_id="HWX73509.1"
                     /translation="MKASELFDVAGLAVIVTGAASGIGYAYADAMADNGARVVLVDID
                     RAGLDQAVAKLKTSGGDVRGAVADVTDRGALRAAFDRAAGELGRLDVLFANAGIDSGP
                     GFLGMTGERAADGAFETLAEERWDKVIATNLTSVFNSIRAAVPHMKRNGKNGGRIIVT
                     TSVAALRPEAIVGTPYMPAKAGAAHLVRQAALEFAKYNILVNAIAPGPFITNIAGGHM
                     RDPEVAKAFGSAVPLNRVASTDEIQGAALFLASRASTFVTGAELVIDGGVMLGRAD"
     gene            3899..4585
                     /locus_tag="VNY79_13500"
     CDS             3899..4585
                     /locus_tag="VNY79_13500"
                     /inference="COORDINATES: protein motif:HMM:NF024109.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HWX73510.1"
                     /translation="MANFVLVHGAWIGGWCWRPNAQALRKAGHEVFTPTLTGLGERSH
                     LMNPGINLDTHIADIVNVFKHEELSDVVLVGHSYGGMVVTGVADALADKIRSLVYLDA
                     FVPESGQALVDLAPPEPKPQPASDYALAPLPAAVFGAKPEVAAFVDARTSPHPAACFA
                     QPVKLTGGIERIKRKTYIYANVPAPTAFTPFYEKARSKPGWTVHTLPCTHLVQVDMPN
                     ELTALLLQEV"
     gene            complement(4634..>5193)
                     /locus_tag="VNY79_13505"
     CDS             complement(4634..>5193)
                     /locus_tag="VNY79_13505"
                     /inference="COORDINATES: protein motif:HMM:NF012618.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73511.1"
                     /translation="VNAAVFSSEGSRIVTASADNTARVWNAMTGALDVVLAGHTDRVL
                     GAAFSRDNSRIVTASADSTARIWDAATGAALATLRGHTGAVAAAAFGPDGSRIVTASA
                     DRTARIWQLDPLVLMPADQRQSYICRERLIGARSFTAREMEEPMLRGRDDLRQPCDRL
                     GPFSLYYYRQSAARAGAALRRAFSN"
BASE COUNT          804 a         1754 c         1691 g          944 t
ORIGIN      
        1 gtcatgctgt tcggcgtgag gatgtcgctg acccggctca tcgccctcgg cgtggcgctg
       61 gccatggtct gtggcgtcgg cctgttgttg agccgcaccc gcatcggact cggcatgcgc
      121 gcactcgcca gcgaccgcaa catcagcgcc gccatcggcg tgcgtgtcgt tcagatcgac
      181 tccttcgcct ggctgatcaa cggcatgttt gccggcgtcg ccggcattct gcttgcaaac
      241 atcaaccggc tcgatcccgg cttcctgacc tttctggtca taccggcaat cgccgctgcg
      301 atcctgggcc gcctgtcgtc attgccgggc gccttcatcg gcgggatggt cgccggcatg
      361 atcgaggcac tgttggttgc ggtgcccgac gtggcgaact tgcgcagcgc cggcccctac
      421 gtcgccgctc tgatcttcct gatgatcgtc ggcgccggcc agggcgttgg agcgcgggaa
      481 tgagtgaagt cggcgccaca gaggctatcc cgctcgcggt gccggccaag ccggaaatca
      541 cgcccggcat gcgcgccgtt gcgatcgtcg cggtggtcgg cgtcgtgtcc ggcgccatcg
      601 ccgtgacctc cagcggctat tggctgtcga atttcaccca ggcctactgc atgacgctgg
      661 ccgtgctcgg ttgtgcgctg ctctacgggc ggctcggctt ggtatcgctt tgccagtggg
      721 cgctggtcgg cgtcggcggc tggataagcc tgcgtgtgta tcactccttt catccgccct
      781 tcctcgtcac catgctcgcc ggcggcgccg gggcctcggt gatcggcatg atctggggcc
      841 tgccggcgct gcgcatgcgc ggtctctatc tggcgctggt cacgctgatg ttggcgggcg
      901 cctttcagac cctcgtcact gtcaccagct tccccgtcgg ggggcctgga ttcctcggcc
      961 aggtcggcgc cagcggcaac gaccgcatca tgatggcgcg cccaatcttt gcagcgggcg
     1021 acaccggcta ttttctcttc gttgcggtcg tgacgctcgc ctgcattttc ctggtcgaag
     1081 cgcaccgcca cagcaagccg gggcgggcct gggcgctcat ccgcaagagc gagcagatgg
     1141 cgatcgccgc cggcgtcagg atcgtgttct acaaggcgtg ggcatttgcg ctctcgggat
     1201 ttcttgccgg cattgccggc gcgctcctcg ccggtctgtt cggccagctc gacgcttcgg
     1261 ccttcccgcc gaccaactcg atcgtgatct tcatcggcac gttgctgggc ggatacgagg
     1321 tctggctcgg cgcgttcctc ggcggcattc tgactcgctt cattccggcg ctgctcatcg
     1381 atctcaacgt caataccaat gtcggcttca tgatcttcgg cgtggcgctg ctgttcgcct
     1441 tgcgcgaccc gctcggcctc ggcggccagc tcaccatcct ggccgagcgt ctctaccaga
     1501 agctccaggc acagcgcgcg tcatgatcaa gatcgacgcg ctcacggtgc agttcggcgg
     1561 catcaaggcg cttgacgcgc tcgacgccga attcgccgcg ccgatctgcg gtctgatcgg
     1621 tcccaacggc gccggcaaga caaccttgct caatgttctc tccggttttc tgaccccgct
     1681 caaaggcacg atcctgctcg acgacattgc gctgctcgga ctctcggcgc ggcgccgggt
     1741 cggcgtcggg ctgcgccgga cctttcagca ggaactcgtc gtcgaagagc tgaccgccgt
     1801 ggaaaacatc caggcgactg ccgatcatgt ctcgcccgac cgcgccagcg cccggcgcga
     1861 agtcgaagcc gccctggatt ttgtcggcct cgacgaacgg cgcaataccc ttggccgcga
     1921 gctcaatctg tttcaacggc gcatggtcga gatcgccaag accctcatcg gccggccgcg
     1981 ggtcattctc atggacgagc ccggggccgg cctcaacgag gcggaaacgg aacggttgcg
     2041 ccggctgttg gccaaaatac cttcgacatt cgattcacag ctcgtgctca tcgaccacga
     2101 cgccgatcta atcgctgccg tctgcatgga gaccgtggtg ttggacttcg gcaagcgcct
     2161 cgccatgggg ccgacccgcg ccgtgcttga cgatccggtc gtgcgccgcg cctacctcgg
     2221 acgcgagtag gccgatgacg gcatccgagc tcacggtgcg caatctcttc gtcacgcgcg
     2281 gcggccgtcc ggtgctgcgc gacgtctcga tcagcgtccc gcctggcgaa atcacggcgc
     2341 tgcttggcgc caacggcgcc ggcaagtcca ctctcgttct tgcgatcgcc ggtgttttgc
     2401 cggcgctgcg cggcgatatt ttctgcgatg gggtgcatct catggggcgg tcgcccgacg
     2461 cggtgcggcg tcatggcgtc gccctggtgc tggagggcca tccggtgctc accggcctct
     2521 cggtgcgcga caatctcgcc gcggccgcgt tgatgcatac gcgtagcgag gccgagcgcg
     2581 aaatcgaggc ggcgctggaa atcttcccgg aactgcgcga tcggctgccg atggcggcgc
     2641 agaatctgtc cgggggtcag aagcagatgg tggtgatcgc gcagggggtg atctcgcgac
     2701 cgcgctacct cctgatcgac gaactatcct tcggcctggc cccgtcgatc gtcggccggc
     2761 tcgcggagac gatacagatc atcgcccggc gcggcgtcgg cattctgctg atcgaacaat
     2821 tcaccacgct cgcattgacg ctggcgaaat cggcattggt gctggagcgc ggcgaactgg
     2881 ccttctccgg cgctgccgaa gagctgcggc gtcgcccgga aatcctgcac ggcgcctacc
     2941 ttgcgaccgg caaggtgcac ccgtcgtgaa ttagtcaggg agcgacgaga tgaaggcatc
     3001 cgaactcttc gacgtagctg gcctcgccgt catcgtcacc ggcgcggcga gcggcatcgg
     3061 ctatgcgtac gccgacgcca tggccgacaa tggagcgcgg gtcgtactgg tcgacatcga
     3121 ccgggccggc ctcgatcagg cggtcgcaaa actcaagacg agcggcggcg acgtgcgcgg
     3181 cgctgtcgcc gacgtgaccg accgtggggc gctgcgcgcc gccttcgatc gcgccgccgg
     3241 ggagttgggc cgcctcgatg tcctcttcgc caatgcaggg atcgattcgg ggccgggctt
     3301 cctcggcatg accggcgagc gcgccgccga cggcgcgttc gaaaccctgg cggaggaacg
     3361 ctgggacaag gtgatcgcca ccaaccttac ttccgtgttc aattcgatca gagccgccgt
     3421 tccgcacatg aagcggaacg ggaagaacgg cgggcgcatc atcgtcacta cgtcggttgc
     3481 ggcgctgcgg cccgaagcca ttgtcggtac gccctacatg ccggcaaagg ccggcgccgc
     3541 gcacctggtg cgccaggcgg ccctcgaatt cgccaagtac aacattctgg tcaacgcgat
     3601 cgcgccgggc cctttcatca ccaacatcgc cggcgggcac atgcgcgatc ccgaggtagc
     3661 caaggccttc gggagcgccg tcccgcttaa ccgcgtcgcc tcgaccgacg agatccaggg
     3721 cgcggcgctt tttctcgctt cccgtgcctc gacattcgta accggcgccg aactcgtcat
     3781 cgacggcgga gtaatgctcg gccgcgccga ctgaaccggg gggaggcgat cctttctcgc
     3841 agcggcatcc gcaacgcgct ttcgcgccga tcgcatgcgg cgcgtccagg aggagacaat
     3901 ggcaaacttt gttctggtcc atggcgcctg gatcggcggc tggtgctggc ggcccaacgc
     3961 gcaggcgctg cgcaaggccg gccatgaggt cttcacgccg accctgaccg gactcggcga
     4021 gcgttcgcat ctcatgaacc cgggcatcaa cctcgacacc cacatcgccg acatcgtcaa
     4081 tgtcttcaaa cacgaggaac tgtcggacgt cgtgctggtc ggccactcct atggcggcat
     4141 ggtggtgacg ggagtggcgg atgcgctggc cgacaagatc agatcgctgg tctacctcga
     4201 cgccttcgtg ccggagagcg gccaagcgtt ggtcgacctt gcgccgccgg agccgaaacc
     4261 tcaacccgcc agcgactacg ccctggcgcc gctgcccgcc gcggtgttcg gcgccaaacc
     4321 cgaggtggcc gcatttgtcg atgcacgcac gtcgccgcac ccggccgcct gcttcgctca
     4381 accggtcaag ctcaccggcg gcatcgaacg catcaagaga aaaacctaca tctacgccaa
     4441 cgttccggcg ccgaccgcct ttacgccgtt ctacgaaaag gccagaagca agccgggttg
     4501 gacggtgcac accctaccgt gcacgcacct tgtccaggtc gacatgccca acgaattgac
     4561 ggctctcctg ctgcaggagg tgtaggcagc gtccatgccg gcctgagctc gtgcgcgccc
     4621 gcaatcgact cgatcaattt gaaaatgctc gccggagcgc cgcgccggcg cgcgctgctg
     4681 actgccggta atagtagagg ctgaacggtc caaggcgatc gcagggttgg cgcagatcgt
     4741 cgcggccgcg cagcatcggc tcctccatct cgcgcgcggt gaacgatcga gcgccgatca
     4801 gacgttcgcg gcagatgtag ctttgacgct gatccgcggg catcagaacc agcggatcga
     4861 gttgccagat gcgcgcggtg cggtcggcgg atgcggtgac gatgcgcgag ccgtccggac
     4921 cgaaagccgc agcggccact gcgcccgtat gtccacgcag cgtagccagc gccgcgcctg
     4981 tggcggcgtc ccatatccgc gcggtgctgt cggcggaagc ggtaacgatc cgggaattgt
     5041 cgcggctgaa ggccgcgccg agaacccgat ccgtgtgccc ggcgagaacg acgtcaaggg
     5101 cgcccgtcat ggcgttccag acgcgcgcgg tgttgtcagc tgaggcggtg acgatgcgcg
     5161 aaccttcgga gctgaacacg gcggcgttca ctc
//
LOCUS       DATMQB010000466         2659 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4261338, whole genome shotgun sequence.
ACCESSION   DATMQB010000466 DATMQB010000000
VERSION     DATMQB010000466.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2659)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2659)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2659
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4261338"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            84..992
                     /locus_tag="VNY79_13510"
     CDS             84..992
                     /locus_tag="VNY79_13510"
                     /inference="COORDINATES: protein motif:HMM:NF017085.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CHAD domain-containing protein"
                     /protein_id="HWX73512.1"
                     /translation="MHGFIEVDMGDKPALRPKAPIAPALRAIAAAILAHARTAIGDPE
                     RASEDTVHEFRRAMKQWRALMRLLDPFLADAARWRTEARDHARSLGTARDGQSALNAF
                     DDIAEKGLALSPRSLATIRTRLEAVREGEEKAVLTPALREGIIGWLDAVTAAVEAWPL
                     DSLDFEALAARLATGYRTARRLVPSDWSQASATERHELRQRVVEHRYQMELIEPLWPR
                     FGRMWTEEAERLRDRLGRCQDLEVLERLAGPHQPLAPWRSRLTPPCNDRKTELAQRAA
                     RIASRLFAERPKAFRRRLEALWDHGR"
     gene            complement(1034..2110)
                     /locus_tag="VNY79_13515"
     CDS             complement(1034..2110)
                     /locus_tag="VNY79_13515"
                     /EC_number="1.1.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009027 - tartrate dehydrogenase activity
                     [Evidence IEA];
                     GO_process: GO:0046395 - carboxylic acid catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tartrate dehydrogenase"
                     /protein_id="HWX73513.1"
                     /translation="MPTNRVYRIAVIPGDGIGKEVVPEGVRVLEAAAKKFGFELRQDD
                     FDFASYDYYAKHQRMMPENWKEKIGRHDAIFFGAVGWPAKIPDHVSLWGSLIQFRREF
                     DQYVNLRPVRLMPGVPTPLANRKAGDIDFWVVRENTEGEYSAIGGRIFAGTEREVVVQ
                     ETVLTRIGVDRVLKFAFELARKTPKKHLTSATKSNGIAITMPYWDERVEAMAKSYPDV
                     QWDKYHIDILTALFVLKPDRFNVVVGSNLFGDILSDLGPACTGTIGIAPSGNINPGRE
                     FPSMFEPVHGSAPDIAGQGIANPIGQIWSGAMMLEHLGENEAASAIVRAIETVLAQEK
                     LRTRDLGGRADTAACGKAVAEALA"
     gene            complement(2216..>2659)
                     /locus_tag="VNY79_13520"
     CDS             complement(2216..>2659)
                     /locus_tag="VNY79_13520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011314712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0017150 - tRNA dihydrouridine synthase
                     activity [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA-dihydrouridine synthase"
                     /protein_id="HWX73514.1"
                     /translation="VAIPVVVNGDIESFDDADAALAASGAGAVMVGRGAQGRPWFPGQ
                     LARYLETRKRGSPPPLREQLALVSALYRETLDLYGREIGLRHARKHLGWALETAAACA
                     GASDPLLKAHRARVLTATEPVLVLRLLAEAFDLFAERLQPAMRAA"
BASE COUNT          433 a          891 c          898 g          437 t
ORIGIN      
        1 atctagcaac ccccctccga taagggaagt gcggggaacc cgatttttcg tcataatgtc
       61 acaaaggacg tcatcgatcc gtcatgcacg gcttcataga agtggacatg ggcgacaagc
      121 cggccttgcg gccgaaggcg ccgattgcac ctgcgttgcg tgcgatcgcc gccgctatcc
      181 tcgcccacgc gcgcaccgcc atcggcgacc ccgagcgcgc gagcgaggac acggtgcacg
      241 agttccgccg cgccatgaag caatggcgcg ctttgatgcg gctgctcgat cccttccttg
      301 ccgacgcggc gcgctggcgc accgaggcgc gcgaccacgc gcgctcgctc ggcaccgccc
      361 gtgacggcca atcggcgctc aatgcgttcg acgacattgc ggaaaaaggc ttggcgctgt
      421 cgccgcggtc gctggcgacg atccgtaccc ggctcgaggc ggtgcgcgaa ggcgaagaga
      481 aggcggtgct caccccggcg ctgcgcgagg ggatcattgg ctggctcgat gctgtcacgg
      541 ccgcggtgga ggcttggccg ctcgatagcc tcgatttcga ggcgctcgcc gcccgcctcg
      601 ccaccggcta ccgcactgcc cgccgcctgg tcccgtccga ctggtcgcag gcgagcgcca
      661 ccgaacggca cgaactgcgt cagcgggtgg tggagcaccg ctaccagatg gaactgatcg
      721 agccgctgtg gccacgcttc ggtcgcatgt ggacagagga ggccgagcgg ctgcgcgacc
      781 ggctcggccg ctgccaggac ctcgaagtgc tggagcggct tgccgggccg caccagccgc
      841 tggcaccctg gcgctcgcgc ctcacgccgc cctgcaacga ccgcaagacc gagctggcac
      901 agcgcgccgc gcgcatcgcc tcgcggctgt tcgccgagcg gccgaaggcg ttccgccgcc
      961 ggctcgaagc gttgtgggat cacggccggt agcgcggccg cggcttacgc tctccaaccg
     1021 ttacccgcgc tagctaggcc aacgcctcgg ccaccgcctt gccgcaggcg gcggtgtcgg
     1081 cccgccctcc gagatcgcgg gtgcgcagct tctcctgcgc gagcacggtc tcgatcgccc
     1141 tgacgatcgc ggaagcggct tcgttctcgc cgagatgctc cagcatcatc gcccccgacc
     1201 agatctggcc gatcggattg gcgatcccct gcccggcgat atcgggcgcc gagccgtgca
     1261 ccggctcgaa catcgagggg aattcgcgcc cggggttgat attgcccgag ggcgcgatgc
     1321 cgatggtgcc ggtgcacgcg gggccgaggt ctgagagaat gtcgccgaac aggttcgacc
     1381 cgaccaccac gttgaagcgg tcgggcttga gcacgaacag cgcggtgaga atgtcaatgt
     1441 ggtacttgtc ccattgtacg tcgggatagc tcttcgccat cgcctcgacg cgctcgtccc
     1501 aatacggcat ggtgatcgcg atgccgttcg atttcgtcgc cgaggtgagg tgcttcttcg
     1561 gcgtcttgcg ggcgagttcg aaggcgaatt tcagcacgcg gtcgacgccg atgcgcgtga
     1621 gcacggtttc ctgtacgacc acctcgcgct cggtgccggc gaagatgcgg ccgccgatgg
     1681 ccgaatattc gccttcggtg ttttcgcgca ccacccagaa gtcgatgtcg ccggccttgc
     1741 ggttggcgag cggagtgggc actccgggca tgagccgcac cgggcgcaga ttgacgtact
     1801 ggtcgaactc gcggcggaac tggatgagcg agccccacaa tgagacatgg tccggaatct
     1861 tcgccggcca gcccaccgcg ccgaagaaga tcgcgtcgtg ccggccgatc ttttccttcc
     1921 agttctccgg catcatgcgc tgatgcttgg catagtagtc gtaggaggcg aagtcgaagt
     1981 cgtcctgccg caattcgaag ccgaattttt tggcggcggc ttcgagcacg cgcacgccct
     2041 ccggcaccac ctccttgccg atgccgtcgc ccgggatgac ggcgatgcgg tagacgcgat
     2101 tggtgggcat gggcgttttc ctccggaggc atggcgagtt acgggtggcg tacattatac
     2161 gaggggcgca cggattgcga cgcgccaacc tttgacgagg gacgctcgcc tccaactacg
     2221 cagcgcgcat cgccggctga aggcgctccg caaacaaatc gaacgcttcg gcgaggaggc
     2281 gtaggacgag tacgggttca gtcgcggtga gcacgcgggc acgatgcgct ttgagcaagg
     2341 gatcagacgc gcccgcgcaa gcggccgcag tttcgagcgc ccagccgaga tgcttgcgcg
     2401 catgacgcag cccgatctcg cggccgtaga ggtcgagcgt ttcgcggtag agcgcgctca
     2461 cgagcgcgag ctgttcgcga agcggcggcg gcgatccgcg cttcctggtc tcaaggtacc
     2521 gcgccagttg gccggggaac cacgggcgcc cttgcgcgcc gcggccaacc atcaccgcgc
     2581 cggcgccgga agcggcaagt gccgcgtcgg catcatcaaa gctttcaatg tcgccattga
     2641 ccacgaccgg gatcgccac
//
LOCUS       DATMQB010000467        12677 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2126096, whole genome shotgun sequence.
ACCESSION   DATMQB010000467 DATMQB010000000
VERSION     DATMQB010000467.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 12677)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12677)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12677
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2126096"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            515..2272
                     /locus_tag="VNY79_13525"
                     /pseudo
     CDS             515..2272
                     /locus_tag="VNY79_13525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009736319.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type I secretion system permease/ATPase"
     gene            2269..3582
                     /locus_tag="VNY79_13530"
     CDS             2269..3582
                     /locus_tag="VNY79_13530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018269119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0030253 - protein secretion by the type I
                     secretion system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family type I secretion periplasmic adaptor
                     subunit"
                     /protein_id="HWX73515.1"
                     /translation="MKRKTWPSSHASIRRHIFAGVVIVAFLAIGVGGWASTAEISGAL
                     IAQGSIVVDSNVKKVQHPTGGVVGELRVRDGDRVKAGDILIRLDETVTRANLAIVTKG
                     LTELYARKARLAAERDGAETLETPKELAASANDPGVKEALTSERKLFELRRKTRLGQK
                     DQLQQRVKQLQEQIAGLTAQQEAKSKEMALIEQELGGVRDLWAKNLVQINRLTSLERE
                     EARLHGERGQLIAGAAEAKGKITETELQILEVDQELSSDVAKELREIDSKIGEYVERK
                     VTAEDQLKRTDIRAPQNGVVFQSTANTVGGVITAGDPVMLIVPETDTLLVEVKVDPKD
                     IDQVKLGQPVVLRFSAFNQRTTPELNGTVARVAADTTNDQRTGQSYYIVRISMTAEEI
                     ERLGDTVKLAPGMPVEAFIQTGDRTMMSYFIKPLHDQLMRSFREK"
     gene            3630..5849
                     /locus_tag="VNY79_13535"
     CDS             3630..5849
                     /locus_tag="VNY79_13535"
                     /EC_number="4.6.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009026141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009975 - cyclase activity [Evidence IEA];
                     GO_function: GO:0016849 - phosphorus-oxygen lyase activity
                     [Evidence IEA];
                     GO_function: GO:0032555 - purine ribonucleotide binding
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate/guanylate cyclase domain-containing
                     protein"
                     /protein_id="HWX73516.1"
                     /translation="MKLIIRWARWFGLARAVCIVLLFALVPLRVIDPRPLEEVRLRAF
                     DLFQVLRPREQTARPVVIVDIDEASLKEIGQWPWPRTVVADLVNRLNALGAVVIGFDV
                     VFPEPDRMSPAVAAESFRGIDAETREKLAGLPSNDEVLAQAIKEARVVVGQAGSAIPA
                     PRSQAEMALQTGFAVKGPDPAPFLVKFAGLLRNVPAIEGAAAGRGLFSINPERDVIVR
                     RVPVVMMAQDVLVPSLSVEMLRLVTHSGAILVRADEAGVKSVAVPGLEVPTDRNGQFW
                     VHFNKHDPARYVSATDVLHGRVDVDRMRGRLVLVGTSAIGLLDTKTTPVEPAMPGVEV
                     HAQILESVLTKSLLTHPNYAIGAELLLAVVLGLAIIIAAPMLPAAIVVALGALLIGGL
                     VALSWYFFAARSLLIDFTYPLISCWLIYLVLTFVNYFREQKQRQQIRSAFGFYLSPQL
                     VAQLAKSPEKLVLGGEERRMTILFSDVRGFTSISEHYKDDPQGLTHLMNRFLTPMTNA
                     IIERKGTIDKYIGDAIMAFWNAPLDDAEHEANACEAALEMLARAEALNVEFKREADAD
                     GGIYMPLRIGIGLNTGPCVVGNMGSDFRFNYSVLGDTVNVASRLESRTKDYRLSMVIG
                     SRTAEKAQDKFATMEIDLIQVKGKKQPEAVFTVIGRAEVASDPRCRELCDPNARMLAS
                     YRSQGWDEALALIDRCRKLANGFDVAGLYDMYVERIAAYRADPPPADWNGVYEAESK"
     gene            complement(5857..6318)
                     /locus_tag="VNY79_13540"
     CDS             complement(5857..6318)
                     /locus_tag="VNY79_13540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012497531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HWX73517.1"
                     /translation="MLEQARVLEADDPGLVAANAAGLAPRLLVIDDDHLHCTIICRVA
                     TRAGFAPVGAATYEAAAKLAQEITFDGMTLDLSLGAHAGVEMLRHLWVLGCKAPIIII
                     SGCNDAMCRETVRIGKSLNLKIQEPVPKPVDLAMLRYSLERLRAQVQPRAA"
     gene            complement(6482..7054)
                     /locus_tag="VNY79_13545"
     CDS             complement(6482..7054)
                     /locus_tag="VNY79_13545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014491094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ActR/PrrA/RegA family redox response regulator
                     transcription factor"
                     /protein_id="HWX73518.1"
                     /translation="MSAMTDAMTRTAADVPHERSLLIVEDDKSFLQRLARAMEGRGFV
                     VTTAESVADGLLQVEKAAPAFAVVDMRLGDGNGLDVISAMKKRRPEARAIILTGYGNI
                     ATAVNAVKLGAVDYLAKPVDADDVAAALLALDNRKIEPPENPMSADRVRWEHIQRIYE
                     LCGRNVSETARRLNMHRRTLQRILAKRAPK"
     gene            complement(7167..8510)
                     /locus_tag="VNY79_13550"
     CDS             complement(7167..8510)
                     /locus_tag="VNY79_13550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008966187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000155 - phosphorelay sensor kinase
                     activity [Evidence IEA];
                     GO_process: GO:0007165 - signal transduction [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ActS/PrrB/RegB family redox-sensitive histidine
                     kinase"
                     /protein_id="HWX73519.1"
                     /translation="MFGLPRTHLRPRNVRLDTLVRLRWLAVFGQFAAVLVVHLGLEFD
                     VPIWPCLGVIALSAVLNLALRVNFRHTQWLEPERAAYLLGFDIAQLAALLYLTGGLEN
                     PFSFLLLGPVLIAATALPTRLTVLIGVFAMVCATVLVFFHYQLPWEPEEPLELPETYV
                     VGVWLSILLAIGYIGVYTWQIAEEARQLSDALAATELVLQREQSLSQLDGLAAAAAHE
                     LGTPLSTITVVAREIERALEPHSPHAEDVKLLREQAHRCREILAKITELPTGEPFDRL
                     PISALIEEAVAPHRNFGVSLTVTLPANRAGEPAGARNPGIRYGLGNLIENAVDFANTR
                     VQVLVQWTADEVAITISDDGPGLAPEVVDRIGAPYVTHRRPGPRGPEGGEDEAFGLGL
                     GFFIAKTLLERSGARLSLKNQAPPLHGATVTVTWNRADFERSPAAPPLEQTLTAS"
     gene            complement(8593..9630)
                     /gene="obgE"
                     /locus_tag="VNY79_13555"
     CDS             complement(8593..9630)
                     /gene="obgE"
                     /locus_tag="VNY79_13555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017483724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HWX73520.1"
                     /translation="MKFLDEAKVYIRSGDGGNGCVSFRREKFIEFGGPNGGDGGKGGD
                     VVAHAVEGLNTLIDYRYQQHFKAKNGRGGMGKDRHGASGADAVLKIPVGTQIYEEDGA
                     TLIADLTEAGQRALLARGGNGGFGNAHFKSSTNRAPRHANPGQPGEELTIRLRLKLIA
                     DAGIVGLPNAGKSTFLAAVSAARPKIADYPFTTLNPQLGVAETDGREFVLADIPGLIE
                     GAHEGVGLGDRFLGHVERCRVLLHLVDGTLADAGEAYNTVRAELSAYGHGLAEKPEIV
                     ALTKADALDAGAIRDQAGRLQRAAKRPPFVISAVSGEGVAEVVRALLAVIEQTRRSTP
                     AADAASAAWHP"
     gene            10080..11045
                     /locus_tag="VNY79_13560"
     CDS             10080..11045
                     /locus_tag="VNY79_13560"
                     /inference="COORDINATES: protein motif:HMM:NF013788.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008233 - peptidase activity [Evidence
                     IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="C13 family peptidase"
                     /protein_id="HWX73521.1"
                     /translation="MPFGEYGVRRFFKLTTLGRVATLSATFLVLDAWASWAPWAPLLI
                     PRNGGYFHAHALARDRGGAAESEAAHFERSQHALLQAEVARLAPPNKGATNVYAVGIA
                     GYADQDVFLKELDGGLAIFDRILSTRNRTVRLVNDRRSAKTLPLASQRNFAAAVHAIG
                     ATMDKNADVLLLLMTSHGDRSGFVLRLPDTATSELTPQEVAQTLDKEGIKNRIVIVSA
                     CFSGIFVPPLANDNTIVLTAADAAHASFGCAAEREWTYFGDAFFRQSVRPGVDLQRAF
                     DNARTLIYGWEMMDHAPPSNPQGHFGPALVNKLAPFFAAGPTAGQ"
     gene            complement(11197..11793)
                     /locus_tag="VNY79_13565"
     CDS             complement(11197..11793)
                     /locus_tag="VNY79_13565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002717527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HWX73522.1"
                     /translation="MTSLERICDETARERSTPVLETERLILRAPRRGDVKAIASLLDD
                     RRIAANTARIPHPYSASDAEQFVASANRQDGEATFMIFCGDKLIGGCGIDPREDAPEI
                     GYWLGVAYWGHGYATEAVRALVDYGFGELCHETLAAGARVTNPASRRVLEKCAFQWTG
                     VRLTRIRAINSAAPVDRFRLDRGLWESLKSWGRVRRVA"
     gene            complement(11913..12185)
                     /gene="rpmA"
                     /locus_tag="VNY79_13570"
     CDS             complement(11913..12185)
                     /gene="rpmA"
                     /locus_tag="VNY79_13570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000315 - organellar large ribosomal
                     subunit [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HWX73523.1"
                     /translation="MAHKKAGGSSRNGRDSAGQRLGLKIFGGEGVLAGNIIARQRGTK
                     WHPGRNVGVGRDHTLFALIDGRVEFRTKAKGRVFVSVLPMTEGAAQ"
     gene            complement(12281..>12677)
                     /gene="rplU"
                     /locus_tag="VNY79_13575"
     CDS             complement(12281..>12677)
                     /gene="rplU"
                     /locus_tag="VNY79_13575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002967949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0000311 - plastid large ribosomal subunit
                     [Evidence IEA];
                     GO_component: GO:0022625 - cytosolic large ribosomal
                     subunit [Evidence IEA];
                     GO_function: GO:0003735 - structural constituent of
                     ribosome [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HWX73524.1"
                     /translation="VEFGEVLVVGGDSLTLGAPTVAGATVAAEVLDQARGPKIIAFKK
                     RRRKNSRRKRGYRQEFTLLRITEILTEGRKASKTAPPKPQRAQAPAPAAAEAEEGAAE
                     SASAPGEGRQARSKKAEKRPSKRPAAKSK"
BASE COUNT         2116 a         4267 c         4153 g         2141 t
ORIGIN      
        1 ccatggcgcg caggaaaact cctgcggcaa ggattgccaa aaagttgaaa cgaaccgaag
       61 gcgctactcg gcaaaaggcg ttcagcatcg ggctttcgct cgattcccgt tcctgacccc
      121 ctcaagtttc aagctttgag cacggatcgg cgccggcctg tcgcacgcag gccggcatga
      181 tggtgtgcgc gctttgcagg catgttgcac cgacggccta cagccgccgg ggaaccatgg
      241 catcggctgc tgatgcttcg cccgcgtgat ccttcagccg ggatacttat tgttaggaat
      301 gatatcccgg ccgtcctggt tcccgggatt agctgcgcgc ctgtgacagc ggcccggccg
      361 tagcaaaccg gtccgcattc cctgatcgaa acaaaataga aacaaatgtc gggatcgcga
      421 gagcgccggg caggtcccac gctcggtgcg gccggttgtc cctaataagc tcgatcgtgg
      481 ctttccgcgc gccaaggtgg taggcacctt cggcatgagc caacttcccc gcccgctgcg
      541 gcagccgccc gcaagtgcag agcttgcggc tgcactaggc gcctgccggc gggcctttct
      601 ggccatcgcc ctgttcagcg ggatgagcaa cattctgatg ctcaccggtt ccctgttcat
      661 gctcgaagtc tacgatcggg tgataccgag ccgcagcgtt ccgaccctcg tcgcccttct
      721 gatcctggcg tcgggactct acgccgcaca gggcatcatc gacgcgatcc gcagccggat
      781 cctggtccgt gtcggcaaca gcctcgacga aacgctgagc ctgcgcgtct atgacgccat
      841 cgtccgcctg ccgctcacgc tcggcgtcag gagcgaaggc gcgcagccga tccgcgacct
      901 tgacaccgtc cgcggcttcc tctccggcac cggcccgatc gctctgttcg acctgccttg
      961 gctgccggtc tacctcggca tctgcttttt gttccatacc tatatcgggc ttaccgcggt
     1021 cggcggcgcg atcatcctcg tcacgctgac cttgttgacc gaaatgctga ctcggcgacc
     1081 gacgcgtagc gccacgcagt tcgctgcggc gcgcaacacg ttgatggagg cgagccggcg
     1141 caatgccgag gcgatcacgg ccatgggcat gaccgcccgc atcgcccagc actggagcga
     1201 cctcaaccgc aactacgttg cgagcgcggc gcgcgcgagc gacgtcgccg gcggctttgg
     1261 tgcgatgtcg aaggtcctgc gcatgatgct gcagtccgcc ctgctcgcgg tcggcgcctg
     1321 gctggtgatc catcaggagt ccacctccgg catcatcatc gccggatcga tcctcggcag
     1381 ccgcgccctg gcgccggtcg atctcgccat cgccaactgg cgcggtttcg tcgccgccag
     1441 gcagggctgg aaccggcttt cgcacctctt cacgcacctg ccggcgcagg cagcgccaat
     1501 ggcgctgcaa ccgccggcaa agacgctcgt ggtgcagaac gcggcggtag cgccgccggg
     1561 cgaccagaag ctcgtctgct aggacgtgaa cttctcgctg accgccggca aggcgctggg
     1621 cgtgatcggg ccgacggcgt cgggaaagtc gtcgctcgcc cgcctgctgg tcggggtttg
     1681 gacgccggca cgcggcagcg tccgcatcga cggcgccacg ctcgatcaat ggtcgccgga
     1741 ggcgctcggc cggcacgtcg gttatctgcc gcaggacgtc gagctgttca gcggcaccgt
     1801 ggcgcagaac atcgcccgct tcgaggagcc gcccgaagcg gaggcggtca tcgccgccgc
     1861 ccaggcggcc ggcgttcacg aactcatcat caatctcggc gccggctatg agacgaatgt
     1921 cggcgatcat ggcaacgcgc tgtcggccgg ccaggcgcag cgcatcgcgc tggcgcgcgc
     1981 gctctatcgc gatccgttcc tcgtcgtgct cgacgagccc aattcgaacc tcgacgcgga
     2041 aggcgacgag gcgttgaccc gcgccatcct cggggtgcgc gcccgcggcg gcatcgccgt
     2101 ggtggtcgcc catcgcccga gcgccatcgc cggtgccgac tacattctgg tcatggccaa
     2161 gggccgccag cagcaattcg ggccgaagga ggaaatcctc aaccgcgcga tccagtcggc
     2221 gccgcagccg cgggctctga aggtggtgcc ggatcaggga ggagcaggat gaagcgcaaa
     2281 acgtggccga gctcgcacgc ctcgatccgc cgccacatct tcgccggcgt cgtgatcgtg
     2341 gcgttcctgg cgatcggagt tgggggctgg gcgtcgacgg cggagatttc cggcgcgctg
     2401 atcgcgcagg gctcgatcgt cgtcgattcg aacgtcaaga aggtgcagca cccgaccggc
     2461 ggcgtggtcg gcgagctgcg ggtgcgcgac ggcgaccggg tgaaggccgg cgacattctc
     2521 attcgcctcg acgagaccgt gacccgcgcc aatctcgcca ttgtcaccaa gggtcttacc
     2581 gagctctacg cgcgcaaggc gcgtctcgcc gccgagcgcg acggcgcgga gaccctcgag
     2641 acgccgaagg agctcgccgc atcggccaac gatcccggcg tcaaggaagc gctgaccagc
     2701 gagcgcaagc tgttcgagtt gcggcgcaag acccggctcg gccaaaagga tcagctgcag
     2761 cagcgcgtga agcaattgca ggagcagatc gccggactca ccgcccagca ggaggcgaag
     2821 tccaaggaga tggcgctcat cgagcaggaa ctgggcggcg tacgcgacct gtgggccaag
     2881 aaccttgtgc agatcaaccg gctcacctcg ctcgagcgcg aggaggcgcg gctgcacggc
     2941 gagcgcggcc agctcatcgc cggcgctgcc gaagccaagg gcaagatcac cgagaccgaa
     3001 ctgcagatcc tcgaggtcga ccaggaacta tcgagcgacg tcgccaagga gctgcgcgag
     3061 atcgacagca agatcggcga atacgtcgag cgcaaggtga ccgcggagga tcagctcaag
     3121 cgcaccgaca tccgggcgcc gcagaacggc gtcgtgttcc agtcgacggc gaacaccgtc
     3181 ggcggcgtga tcaccgccgg cgatccggtc atgctcatcg tgccggagac ggacacgctc
     3241 ctggtcgagg tcaaggtcga tcccaaggac atcgatcagg tcaagctcgg ccagcccgtc
     3301 gttctgcgct tctcggcgtt caaccagcgc accacccccg agctcaacgg caccgtcgcg
     3361 cgggtcgccg ccgacaccac caacgaccag cgcaccgggc agagctacta catcgtgcgc
     3421 atctcaatga ccgccgaaga gatcgagcgg ctcggcgata cggtcaagct ggcgccgggc
     3481 atgccggtcg aagccttcat ccagaccggc gaccgcacga tgatgtccta ttttatcaag
     3541 ccgttgcacg atcagcttat gcgttcgttc cgggagaagt aaactcatcc ttccttgctt
     3601 cgccgcgccg gtgaggacag acacgaacca tgaaactcat catccgctgg gcgcgttggt
     3661 tcggcttggc gcgagcggtg tgcatcgtgc tcctgttcgc gctggtgccg ctgcgcgtca
     3721 tcgacccgcg gccgctcgag gaagtgcggc tgcgcgcgtt cgatctgttt caggtgctgc
     3781 ggccgcgcga gcagaccgcg cggccggtcg tcatcgtcga cattgatgag gcgagcctca
     3841 aggagatcgg gcaatggccg tggccgcgca ccgtggtggc cgatctcgtc aaccggctca
     3901 acgcgctcgg cgccgtcgtc atcggcttcg atgtcgtttt ccccgagccg gaccgcatgt
     3961 cgcccgccgt tgccgccgaa agcttccgcg gcatcgacgc ggagacgcgc gagaagctcg
     4021 ccggcctgcc gagcaacgat gaggtcctgg cgcaagcgat caaggaggcc cgcgtggtcg
     4081 tcggccaggc cggctcggcg ataccggcgc cgcgctcgca ggccgagatg gcgttgcaga
     4141 ccggcttcgc cgtcaagggg cccgatccgg cgccgttcct ggtgaagttc gccgggctgt
     4201 tgcgcaacgt tccggcgatc gagggggccg ccgccggccg cgggctgttc tcgatcaatc
     4261 ccgaacgcga cgtcatcgtc cgtcgcgtgc cggtggtcat gatggcgcag gacgtactgg
     4321 tgccttcgct gtcggtggag atgctccgcc tcgtcaccca ctccggcgcc atcctggtcc
     4381 gcgccgacga agccggcgtg aaatcggtcg cggtgcccgg cctcgaagtg ccgaccgacc
     4441 gcaatggcca gttctgggtc cacttcaaca agcatgatcc tgcgcgttac gtgtcggcga
     4501 cggacgtgct gcacggccgc gtggacgtcg accgcatgcg cggccggctg gtactcgtcg
     4561 gcacctcggc gatcggcctc ctcgacacca agaccacccc ggtcgagccc gccatgcccg
     4621 gcgtcgaggt gcacgcccag attctcgaga gcgtactgac caagtcgctc ctcacccatc
     4681 cgaattatgc gatcggggcc gagctgctgc tggccgttgt cctcggcctc gccatcatca
     4741 tcgccgcgcc gatgctgccg gccgcgatcg tggtcgcgct cggcgccctg ctgatcggcg
     4801 gactggtcgc gctctcgtgg tacttcttcg ccgcgcgcag cctgctcatc gatttcacct
     4861 atccgctgat ctcgtgctgg ctgatctatc tggtgctcac cttcgtcaac tatttccgcg
     4921 agcagaagca gcgccagcag atccgctccg ccttcggctt ctatctgtcg ccgcagctgg
     4981 tcgcgcagct cgcgaagtcg ccggagaagc tggtgctcgg cggcgaggaa cggcgcatga
     5041 cgatcctgtt cagcgacgtc cgcggcttca cctccatttc cgagcactac aaggacgatc
     5101 cccagggcct cacgcacctg atgaaccgtt ttctcacgcc gatgaccaac gccatcatcg
     5161 agcgcaaggg cacgatcgac aaatatatcg gcgacgccat catggcgttc tggaacgcgc
     5221 cgctcgacga tgccgagcac gaggccaatg cctgcgaggc ggcgctggaa atgctggccc
     5281 gtgccgaggc gctcaacgtc gagttcaagc gcgaggcgga cgctgacggc ggcatctaca
     5341 tgccgctgcg catcggcatc gggctcaaca ccgggccgtg cgtcgtcggc aacatgggct
     5401 ccgacttccg cttcaactat tcggtgctcg gcgacaccgt caacgtggcg tcacggctgg
     5461 aatcgcgcac caaggactac cgcctttcca tggtcattgg ttcgcgcact gcggaaaagg
     5521 cccaggacaa gttcgccacc atggagatcg atctgatcca ggtgaagggc aagaagcagc
     5581 cggaagcagt gttcaccgtc atcggccgcg ccgaggtcgc gagcgatccg cgctgccggg
     5641 aattgtgcga tcccaatgcc cgcatgctcg ccagctaccg cagccagggc tgggacgaag
     5701 cgctggcgct gatcgaccgc tgccgcaagc tcgccaacgg tttcgacgtg gccggcctct
     5761 acgacatgta tgtcgagcgc atcgccgcct atcgcgccga cccgccgccg gccgattgga
     5821 acggcgtcta cgaggccgag tcgaagtagc ttgaggctat gccgctcgcg gctggacctg
     5881 ggccctgagc cgctcgagcg aatagcgcag catggcgaga tcgaccggct tgggcaccgg
     5941 ttcttggatt ttgaggttga gcgacttgcc gatgcgcacg gtctcgcggc acatcgcgtc
     6001 attgcagccg ctgatgatga tgatcggcgc cttgcagccg agcacccaga ggtggcgcag
     6061 catctcgacg ccggcgtgtg cacccagcga gagatcgagc gtcatgccgt cgaaggtgat
     6121 ctcctgcgca agtttcgcgg ctgcctcgta ggtggccgcg cccactggag caaagccggc
     6181 cctcgtcgca acccggcaga tgatcgtgca gtgaagatga tcgtcgtcga tgacgagaag
     6241 gcgcggcgcc agtcccgcag cattcgccgc gaccaagccc ggatcgtccg cttcgagcac
     6301 cctcgcctgt tcgagcatga gcccgccgcc aaacccagcc agcaataccc gcgactatcg
     6361 ggtcgcggct gcgaactttg ccttaacgcg gcgcgtaaga ttcgaggcga tttggcgcga
     6421 tctgcgccga cgcggttagt cggccgtaaa tggcgggccg gtggcgctcc ttggggcgcg
     6481 gctacttcgg cgcgcgcttg gcgagaatgc gctgcaaggt gcggcggtgc atgttgagcc
     6541 ggcgcgcggt ttccgagacg ttgcggccgc acaattcgta gatgcgctgg atgtgctccc
     6601 agcgcacgcg atccgccgac atcggatttt ccggcggctc gatcttcctg ttgtcgagcg
     6661 caagcagcgc cgccgccacg tcgtcggcat cgaccggctt ggccaggtag tcgacggcgc
     6721 cgagcttcac cgcgttcacg gcggtcgcga tattgccgta gccggtgagg atgatggcgc
     6781 gtgcctcggg ccgccgcttc ttcatcgcgg agatgacgtc gagcccgttg ccgtcgccaa
     6841 gccgcatatc gacaacggcg aaagccgggg cggccttctc gacctgcagg aggccgtcgg
     6901 cgactgattc ggcggtggtc acgacgaagc cgcggccctc catggcgcgc gccaggcgct
     6961 gcaggaagga tttgtcatcc tcgacgatca gcagcgatcg ttcatgcggg acatcggcgg
     7021 cggtacgggt catggcgtcg gtcatggcac tcatggcaat tccactcttt caaatgtcgc
     7081 tgcagcgaac tgccgttcac cgcgcctgcg tcgccaccgc tccccgggac ctgttccagt
     7141 caaagagccc gactctaccc aaagagctat gaagcggtca gtgtctgctc aagagggggc
     7201 gcagcagggg aacgctcgaa atccgcgcga ttccaggtaa cggtaactgt cgccccgtga
     7261 agcgggggcg cctggttctt cagggagagc ctggccccag aacgttccag caatgttttg
     7321 gcaatgaaaa agcccaggcc gagcccgaag gcctcgtcct cgccgccttc cggcccgcgg
     7381 ggcccgggcc gcctgtgggt gacgtagggc gcgccgattc ggtccacgac ctcgggggca
     7441 aggcccggcc cgtcgtcgct gatggtgatc gcgacctcgt ctgccgtcca ctgcacgagg
     7501 acctggacac gcgtgttggc gaaatcgacc gcgttctcga tcaaattgcc gaggccgtag
     7561 cggatgcccg ggttgcgcgc ccccgccggt tccccggcgc ggttggcggg aagcgtgacc
     7621 gtgagcgaga cgccgaaatt gcggtgcggc gccaccgcct cctcgatcag ggccgagatc
     7681 ggcagccggt cgaacggctc gccggtcggc agttcggtga tcttggcgag gatttcgcgg
     7741 cagcggtgcg cctgctcgcg caagagcttc acgtcctcgg catgcggcga gtgcggctcg
     7801 agcgcgcgct cgatctcgcg cgcgaccacc gtgatggtgg agagaggggt gccaagctcg
     7861 tgcgccgccg cggcagccag cccgtcgagc tgagacaggg actgctcgcg ctgcaggacc
     7921 agctcggtcg ccgccagcgc atcggaaagc tggcgggcct cctcggcaat ctgccacgtg
     7981 tagacgccga tatagccgat cgccagcagg atcgagagcc acacgccgac cacgtaggtt
     8041 tccggaagtt cgagcggttc ctccggctcc cagggcagct ggtagtgaaa aaagacgagc
     8101 acggtggcgc agaccatggc gaaaacgccg atcagcaccg tcaaccgcgt cggcagcgca
     8161 gtcgccgcga tcagcaccgg tccgagcagc agaaacgaaa acggattctc caggccgccg
     8221 gtgagataga gcagcgcggc gagctgggcg atgtcgaagc ccaggagata ggcggcgcgc
     8281 tcgggctcga gccactgcgt gtgccggaag ttcacccgca gcgcgagatt gaggacggcc
     8341 gacagcgcga tcacgccgag gcagggccag atcggaacat cgaattcgag cccgagatgc
     8401 accaccagca cggccgcgaa ctggccgaaa acggcgagcc agcgcagccg aaccagcgta
     8461 tcgagccgca cattgcgcgg ccgcaaatgc gtgcggggca gaccgaacat ggcattaatg
     8521 tagcgagcgg cgggcgctaa tccaaacaaa gcgcgcggct gccacgcctg ccggcgccgc
     8581 ctccgcgccg tgtcacggat gccaggcggc gctcgccgcg tcggccgcgg gcgtgctgcg
     8641 gcgcgtttgt tcgatcaccg caagcaacgc gcggaccacc tcggcgacgc cttcgccgct
     8701 cacggcggag atgacgaaag gcggcctctt cgccgcgcgc tgcaatcgcc ccgcctggtc
     8761 tctaatcgcg ccggcatcga gcgcgtcggc cttggtcaac gcgacgatct ccggtttctc
     8821 ggcgaggccg tggccgtagg cggagagctc cgcgcgcacc gtgttgtagg cctcgccggc
     8881 gtcagcgagc gtgccgtcga cgagatgcag cagcacccgg caccgctcca cgtggccgag
     8941 aaagcgatcg ccgaggccga cgccctcgtg cgcgccctcg atcaggcccg gtatatcggc
     9001 gagcacgaat tcgcggccgt cggtctcggc gacgccgagc tgcggattga gtgtggtgaa
     9061 cggatagtcg gcgatcttcg gcctggccgc actgaccgcg gcaaggaagg tcgatttccc
     9121 cgcattcggc aagccgacga tgccggcatc ggcgatgagc ttgagccgca ggcggatggt
     9181 gagctcctcg ccgggctggc cgggattggc gtggcggggc gcgcgattgg tcgaggattt
     9241 gaagtgcgca ttgccgaagc cgccattgcc tccgcgggcg aggagggcgc gctggccggc
     9301 ttcggtcaga tcggcgatca gggtcgcgcc atcttcttcg tagatctgcg tgccgaccgg
     9361 tatcttgagc acggcgtcgg cgccgctcgc gccgtggcgg tccttgccca tgccgccgcg
     9421 accgttcttc gccttgaagt gttgctggta gcgatagtcg atcaacgtat tgaggccctc
     9481 gaccgcgtgc gcgaccacgt caccgccctt gccgccatca ccgccgttcg gcccgccgaa
     9541 ttcgatgaac ttctcgcgcc ggaacgagac gcagccgttg ccgccgtcgc cggagcggat
     9601 atagaccttg gcctcatcga ggaatttcat cagagcgata tagcgtatcg ccgccgaact
     9661 cgcttgctcg acgcaaagca gcacgacaac aatgagtgca gtgggcgtga ccggtagaaa
     9721 cgagggttag ccgagagctt cgccgggagg ggccagtttg ggccttgcct cactgctgcg
     9781 gcccgctagg ccgctcccga cgcgccgttc gcgcgtgccg ctacgccgct acccgaacag
     9841 tgaggcggcg atcatcgcgg ctggactggc ccgggggcat ggcacctcca ttccgcatct
     9901 tcgcggggcg aaacgcacag aggcgatcgc acccggatca tatgctcctc ctccggcttg
     9961 gagctgtcaa tgttgccggt gacgcggccg aacgggttcc acgctcgacg ggggagttcc
    10021 attgagactc gcgcttgcgt tacaaagcag tgcgatacag gcatctgcgg ttcacccgcg
    10081 tgcctttcgg agaatacggc gtgcggcgct tcttcaagct gacgacgctc ggccgggtgg
    10141 ccacgctctc ggccaccttc ctggtgctcg acgcatgggc gtcatgggca ccatgggcgc
    10201 ctctgctcat tccgcgcaac ggcggatatt tccacgcgca tgcgctcgcg cgtgaccgcg
    10261 gcggcgctgc cgagagcgaa gcagcacatt tcgagcggtc gcagcacgcg ctcctgcagg
    10321 ccgaggttgc ccgcctcgcg ccgccgaaca agggggcaac gaatgtctat gccgtcggca
    10381 tcgccggtta tgccgaccag gatgtgttcc tcaaggagct tgacggcgga ctggcgattt
    10441 ttgatcgcat cctatcgacc cgcaatcgca cggtgcgatt ggtcaacgac cgccgctcgg
    10501 cgaaaacact gccgctcgcc agccagcgca attttgccgc tgcggtgcat gccatcggcg
    10561 cgacaatgga caagaatgcc gacgttctgc tgctgctgat gacgtcacac ggggaccgca
    10621 gcggcttcgt gctgcgattg cccgacacgg ccacgagcga gctgacgccg caggaagttg
    10681 cgcagaccct cgacaaggag ggcatcaaga accgcatcgt catcgtgtcg gcgtgctttt
    10741 caggaatatt cgtgccgccg cttgccaacg acaacaccat cgtgctgacc gccgcggatg
    10801 ccgcgcatgc ctcgttcggg tgcgccgccg aacgcgaatg gacctatttc ggcgacgcgt
    10861 tcttcaggca gagcgtgcgg ccgggcgtcg atctgcagcg cgcgttcgac aacgcccgca
    10921 ccctgatcta cggctgggaa atgatggacc acgcgccgcc gtcaaatcca cagggccatt
    10981 tcgggccggc gctggtcaac aagctggcgc cgttcttcgc agccgggccg accgccgggc
    11041 agtagcggcg acagggggag cgtcatcgcc tgaaacgatg gcgctccgcc ctgtttgcga
    11101 acgcgaacgc gatcgctgct gatcgcgccg agcaggtgtt gtccaggacg gcctgacttt
    11161 cgcgaaaagc gcttgcccgt tccgatcacg ctcccatcag gccacgcgcc tcacccggcc
    11221 ccacgatttc aacgattccc acaatccgcg atcgaggcgg aagcggtcga ccggcgctgc
    11281 ggaattgatg gcgcggatgc gggtcagccg aacgccggtc cactgaaacg cgcacttctc
    11341 cagcacccgg cgcgaagccg gattggtaac gcgggcgccc gcggccagcg tctcgtgaca
    11401 aagctcgccg aacccataat cgaccagcgc gcggacggcc tccgtggcgt agccgtgacc
    11461 ccaataggcg acgccgagcc agtagccgat ctcgggggca tcctcgcgcg gatcgatgcc
    11521 gcaacccccg atcagcttgt cgccgcagaa gatcatgaat gtcgcctcgc cgtcctgtcg
    11581 gttggcggac gcaacgaact gctcggcgtc gctggcgctg tagggatgcg gaatgcgcgc
    11641 cgtattcgcg gcgatgcggc ggtcgtcgag gagggacgca atcgctttta cgtccccgcg
    11701 acgcggcgcg cgcaagatga gccgctcggt ctcgaggacg ggagtactgc gctcgcgcgc
    11761 ggtctcgtcg caaattcttt ccagcgaagt catggcacgg gctcctgcag aaaaccgaaa
    11821 gggggagccg gcatccggtc tccccctttt cggagcccaa ttgggcccgc cggttcgact
    11881 ggatgccggc ggacttcata tgatccaccg ttttactggg ccgcgccctc cgtcatcgga
    11941 agtaccgata cgaacacgcg gcctttggct ttggtacgga actcaacgcg accgtcgatc
    12001 aaggcgaaca gggtgtggtc ccggccgacg ccgacattcc gcccggggtg ccatttggta
    12061 ccgcgctggc gcgcaatgat gttgccggcg agcacgcctt cgccgccaaa gatcttgagc
    12121 cccagccgct gaccggcgga atcgcgaccg ttacgcgacg atccgcccgc tttcttgtga
    12181 gccattcctg gcctccaacc ttcttgacta ctgtctaccc cggattcgtg acaaaagcat
    12241 cactgctcgg tatcatttct ttttgtcctt ttgccgccgg ctacttggat ttcgcggccg
    12301 gccgcttcga tggccgcttt tccgccttct tgctccgcgc ctggcggccc tctcccggcg
    12361 cgcttgccga ttccgctgca ccttcctctg cctctgcggc ggccggcgct ggcgcctgcg
    12421 cgcgctgcgg cttcggtggc gccgtcttgc tggccttcct tccctctgtg aggatttcgg
    12481 tgattcgcag cagcgtgaac tcctggcggt atccgcgctt gcgccgcgag ttcttccggc
    12541 ggcgcttctt gaaggcgatg attttcggcc cgcgcgcctg gtcgagcact tccgccgcaa
    12601 ccgtggcgcc ggcgaccgtc ggggcgccga gcgtcaggct atcgccgccg acgaccagaa
    12661 cctcgccaaa ctcgacg
//
LOCUS       DATMQB010000468        12305 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1514581, whole genome shotgun sequence.
ACCESSION   DATMQB010000468 DATMQB010000000
VERSION     DATMQB010000468.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 12305)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12305)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12305
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1514581"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(273..3500)
                     /locus_tag="VNY79_13580"
     CDS             complement(273..3500)
                     /locus_tag="VNY79_13580"
                     /inference="COORDINATES: protein motif:HMM:TIGR03897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 2 lanthipeptide synthetase LanM family
                     protein"
                     /protein_id="HWX73525.1"
                     /translation="MDAFYERLIVRAATIDELLSADFEPLPGQKGDADLAGRRLAAWC
                     RSCASGDWSLFERRLMRDGLTLAQALTRFASIRRKPSAAPPPWIADAIWIDAALQSAG
                     EDAKQPAAHDRAEPCAFEHLLAPVVLEAEARLCSNVDARALNNLTESARASLRRSLLD
                     ELSTLTAPALYERFDQARKAAAVPPATARAPQTASASTSLYDQFVAEMKGGGFRRLFE
                     DKPVLLRLVATLTRQWIEAAREFVLRLDADLAPIRRDILVAGAAGRVAAIEGGLSDPH
                     NGGRSVLIVGFEDGARVVYKPKDLRLDIAWRALIDRLNRSDAPVELRPVRAIARDGYG
                     WTEFITHAGCADAEGCRRFFRRAGAWLALLHSFAATDMHQENLIAAGDHPVPIDLETV
                     LQPTADEHKSEDPEGQAFDAAIEMLANSVMTVGLLPAFARSPENKVFAVGGMTADWNS
                     KTRLRWNQINSDEMRPARTKETGEANPNLPHVEGRYAKFGDHVGDFVAGFEEYANFLH
                     CRSGGANGAGLFDGFAAVPVRKVVRATRFYYMLLQRLKNHTSMTDGVLWSAQADFVAR
                     LADWESDADPLWQLQRAERSALLTLNVPHFVSPSDGREICDAGGISVPTAAISGLDRA
                     RARAAGLDAQEIAWQVEVIRHNTSSLAKAGISAGVAAPDDIRADAAGAPAEEIFAAEA
                     DRIAAEIGRQAIRRGPGAAWIGLDWLGDSEVFQLVCLGPELYNGVSGIALFLAAHAQV
                     TGSALSRELALAGLARLRKTLRGRNAPRLARSLGIGGAAGLGSIAYALTVISKSLRDD
                     ALLADAQAVAEQFTDDLIAADQRLDVIGGSAGAILGLLRLHRDTGSAEVLGRALKCGE
                     HLMTQSRIGPEGRRSWVGQGFGPHPLNGMSHGAAGFAYALASLAAATGREDFAAAAAQ
                     CIAFEDSSYDPARHNWPDLRWGGEPTWPCQWCHGAPGIGLARLATAKRGSVDARLLDG
                     DARNAVAGVEHGWRGLVDTLCCGSLGSIEFFSAAGDALARGDLRELASQRLLAVLRAA
                     AARGDYRWNSGKGRFNLGLFRGLAGVGYTALRRLDGSLPNVLIWE"
     gene            3946..4086
                     /locus_tag="VNY79_13585"
     CDS             3946..4086
                     /locus_tag="VNY79_13585"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73526.1"
                     /translation="MNEKIIDQFEDEVLSYEVSDEALESAGATEIAGAWTVVCTGIQC
                     PG"
     gene            4225..4371
                     /locus_tag="VNY79_13590"
     CDS             4225..4371
                     /locus_tag="VNY79_13590"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73527.1"
                     /translation="MNGTTIGLDQTEAEALSYEISDEALEAAAGSDALANWTMFCTGI
                     QCPG"
     gene            4973..5767
                     /locus_tag="VNY79_13595"
     CDS             4973..5767
                     /locus_tag="VNY79_13595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007601807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0030551 - cyclic nucleotide binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide-binding domain-containing
                     protein"
                     /protein_id="HWX73528.1"
                     /translation="MSSANFDPAAILNRALELATQNLRVEKVLIQLGLDPSHISYEAV
                     FNRLVDVALANITFTNLLALTGASLYVATLMVRTIVPLRVLGIVSMVFFIAYGALAGA
                     VATFFLYLLSLPINVIRLRQMLNLVKKARMSAQGDLSMDWLRPFMTPRKYRSGEVLFH
                     KGDVAKEMFLTVTGKFLVNEINVELPPGRFMGELGFVAPKNRRTQTVKCIEDGDVLTI
                     TYEKLLELYFQNPEFGYYFLRLTSERLMQNISRLEALLEATKASPR"
     gene            5777..6853
                     /locus_tag="VNY79_13600"
     CDS             5777..6853
                     /locus_tag="VNY79_13600"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73529.1"
                     /translation="MNTALPALPVVDIREGGPLHHARQSATTARALRDACLGFFPRAA
                     LPLVPAFDRLARRWLARSRSPYLPEIAEIAATLNFSGVWLLNASYQWGCTALACERDG
                     APWLMRTLDWPFTGLGRHTELAHMRGEHGDFFSVTWPGYVGVLTAMAPRRFAASVNQA
                     PMRRRTGHPWLRPYDFAANALDVWACSDCVPPDQLLRRTFETCDGYAAARRLLERTPV
                     ARPVIYTLVGCAAHERCVIERTETDFLTREQETSAANDWLPTRPGWEGRIGTRRFLVS
                     TFAEAAGFSRARRETLAAWSGPLADAGFDWVCAPVLNPYTRLAVAMSPARGILRAVGY
                     DVAGGDLPEPVTRPCEIENLAQAA"
     gene            7043..7249
                     /locus_tag="VNY79_13605"
     CDS             7043..7249
                     /locus_tag="VNY79_13605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018321068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1127 domain-containing protein"
                     /protein_id="HWX73530.1"
                     /translation="MSTMKHSAANSRVFRSSPWSAVRTLIVEWRRRVRSRYELRSLGD
                     AELRDIGLTRGEADFDQSKSFWLS"
     gene            7380..8240
                     /locus_tag="VNY79_13610"
     CDS             7380..8240
                     /locus_tag="VNY79_13610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009398884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HWX73531.1"
                     /translation="MPTVASTDGTKLYYEEAGSGTPIVFVHEFAGDYRTWEPQLRYFS
                     RAHRCVAFSARGYPPSEVPPDPARYGQDIARGDVIAVMDGLGLKKAHVVGHSMGAYTA
                     LHVGIRHPERCISVTAAGCGWGSVADPAVREAMRKLAVETAAMFAEKGMAEAAVIYAD
                     TPTRHAQKYKDPRGFAEFARMLGEHSAQGHALTMSMLQAKRPTLWDMEADLKRFSVPL
                     LVIVGDEDETCIDGSVFLKRTAPTAALAVIPRSGHNINSEEPAAVNAALADLFAAAES
                     GRWLAHRPPA"
     gene            complement(8280..8810)
                     /locus_tag="VNY79_13615"
     CDS             complement(8280..8810)
                     /locus_tag="VNY79_13615"
                     /inference="COORDINATES: protein motif:HMM:NF024583.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HWX73532.1"
                     /translation="MTARLLGQNTLAGGLRTILNDVIALHGAEFGNIQLAIDDDTLAL
                     IEHRGFDEPSLRSLRRVASDGGAASARAFAARKSVVIPDLSKDRALAPYHQLANTMGI
                     RAMQSTPFIAAGGKCVGVVSTHFANVHTPTEIEMETLQQYGFVAADFIISKTQGADLA
                     AVADACFRRLMADVAA"
     gene            complement(8968..10512)
                     /locus_tag="VNY79_13620"
     CDS             complement(8968..10512)
                     /locus_tag="VNY79_13620"
                     /inference="COORDINATES: protein motif:HMM:NF019310.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HWX73533.1"
                     /translation="MTHSTTEDISRGTADAPPGVETAAQPSAPHAPRSLFWTVFPSIM
                     LPMFMAVADQTIVATALPAIASSLGGVERVSWVVVSYLIANTIAAPVYGRLGDSFGRR
                     RMMLVALVVFMTGSVFCALAPTINWLTAARVLQGFGGGGLMTLSQALIGETIPPRERG
                     RYQGYLAGVMVSSSTFGPVAGGYLTQAFGWPSIFLVNIPLGLGAVLLVLRLEARPGDR
                     RRTTFDAPGLVLFILFVSPVIFALAQVQRMTAGSLPEILGLLALGTVSLLLLIWQEGH
                     SASPLIPPRLFREPSVWRGAGLAACHGAALVSLITFLPMYLRAARGTGPAETGLLLLP
                     LTFGVGLGSLITGQLVTRTGRTAIFPSYGYVAATAGLLFLAFWVPHLTLSQLPWVFGG
                     TALFMGTVMGVVQVTVQAIAGQRMLGAGAAMVQFSRSVGAALGTAAVAAVLFSVLAAG
                     DPERASLFGMILDRGPDAIASLAPVRQVAVQMQIGDAFRAAFVTIAAFTGIGAWLAWS
                     MPLRRL"
     gene            10801..11232
                     /locus_tag="VNY79_13625"
     CDS             10801..11232
                     /locus_tag="VNY79_13625"
                     /inference="COORDINATES: protein motif:HMM:NF020918.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phasin family protein"
                     /protein_id="HWX73534.1"
                     /translation="MPQEHPRNESQRSDNPRSESLRSEHLRGEKSAGASAVNAQFAEM
                     GAKSVTAGLRMQKELFETFQDISRDWFARATSEAELAFKLPRQLTNARSVPDAMSAYQ
                     EWLNEWLSMCGEDGRRLISDGQKIMDTGARCFANASPTANS"
     gene            complement(11840..12253)
                     /locus_tag="VNY79_13630"
     CDS             complement(11840..12253)
                     /locus_tag="VNY79_13630"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73535.1"
                     /translation="MCDFSLQSVRSRPAKVGDKLVTRDFGTGTRGFAAAADPGMAVCL
                     LPGTELAFTAQIACLPAGLLGWKTQTINHETAIFRQVNKDKLAAHHDALEFPDGRTVL
                     LTLLCEGQVATVLQLPAKPTTAAEAREQERVGFLG"
BASE COUNT         2124 a         4022 c         4097 g         2062 t
ORIGIN      
        1 cggctcgtgg tcggcggttt ttcgaagggg tgaaaattgg tgcgtgggta gaacgttggc
       61 gcagggccac gctctgcttt atgatgccgt gagcactagt ggagtggatt tgacattcgc
      121 taccccgtag ccgcgatgcg aatgtcaaat ccaaactcaa ctagaaatct atatttgctg
      181 gtggtccttt gattctaaca ttcgcaaaag tggccactga ggcgggatgc gaatgttaga
      241 atcggaccac tagagccgat agcgcggtcg ggctattccc agatcaggac gttcggcagc
      301 gagccgtcga gccggcgcaa agcggtatag ccgacgcccg caagtccgcg aaacaggccg
      361 agattgaacc ggcctttgcc gctgttccaa cggtaatcgc cccttgccgc ggccgctcgc
      421 agcacggcaa gcagccgctg cgacgcgagt tcgcgcaggt cgccgcgggc aagggcatcg
      481 ccggccgcgc tgaaaaattc aatgctgccg agcgatccgc aacagagcgt atcgacgagg
      541 ccgcgccagc cgtgctcgac gcccgcgacg gcgttgcgcg cgtcgccgtc aaggaggcgc
      601 gcatcgacgc ttccccgctt ggccgtggcg aggcgcgcaa ggccgatgcc aggcgctccg
      661 tggcaccact ggcacggcca cgtcggttcg ccgccccagc gcagatccgg ccagttgtgg
      721 cgcgccgggt cgtagcttga gtcttcgaag gcgatgcatt gcgctgccgc ggccgcgaaa
      781 tcctcgcggc ccgtcgccgc cgccaacgac gccagcgcgt aggcaaagcc tgccgcgccg
      841 tgcgacatgc cgttgagcgg atgcgggccg aaaccctggc cgacccagct ccggcggccc
      901 tcgggcccga tccggctttg cgtcatcagg tgttcgccgc atttcagcgc gcggccgagc
      961 acctcggcgg atccggtgtc gcgatgaagc cgaagcaggc cgaggatcgc gccggcgctg
     1021 ccgccgatga cgtcgagacg ctggtccgcc gcgatgaggt cgtcggtgaa ctgctccgcc
     1081 accgcttgcg cgtccgcgag caacgcatcg tcacgcaggc tcttcgagat caccgtcagc
     1141 gcgtaggcga tcgaccccaa cccggcggcg ccaccgatgc ccagagagcg ggcgaggcgc
     1201 ggcgcattcc ggcctctcag ggtcttgcgc aggcgcgcca agccggcgag ggccagttcg
     1261 cgcgagagcg cgctcccggt cacctgcgcg tgcgcggcca gaaagagcgc aatgccggag
     1321 acgccattgt agagttcggg acccaggcat acgagctgga agacttcgga gtcgcccagc
     1381 caatcgagcc cgatccaggc cgcgcccggc ccgcggcgaa tggcttgccg gccgatctct
     1441 gcggcgatcc ggtcagcttc cgccgcgaag atttcttccg ccggcgcgcc ggccgcatcg
     1501 gcgcgaatgt cgtcgggcgc ggcaacgcct gccgagatac cggccttcgc aagcgagctg
     1561 gtattatgcc ggatgacctc gacctgccag gcgatctcct gcgcatcgag cccggcggcg
     1621 cgggcgcgcg cgcgatcgag gccggagatc gcggcggtcg gtactgagat gcccccggca
     1681 tcgcatatct ccctgccgtc gctgggcgag acgaaatggg gcacgttcaa cgtcagcagc
     1741 gcggagcgtt cagcgcgctg cagctgccag agcggatcgg catcgctctc ccaatccgcg
     1801 agcctggcga cgaaatccgc ctgcgccgac cagagcacgc cgtcggtcat gctcgtgtgg
     1861 tttttcaggc gctgcagcag catgtagtag aagcgggtcg cgcgaacgac cttgcggacc
     1921 ggaacggcgg caaagccgtc gaacaagccg gccccgttcg cgccgccgct tcgacagtgc
     1981 aaaaaattcg cgtactcctc gaaacccgct acgaagtcgc cgacgtgatc gccgaatttg
     2041 gcgtaacgtc cctcgacatg cggcaggttg ggattggcct cgccggtctc cttcgtcctc
     2101 gccggccgca tctcatcgga gtttatttga ttccaccgca gccgggtctt cgaattccag
     2161 tccgccgtca tgccgccgac ggcgaagacc ttgttttccg gagagcgggc gaaggcggga
     2221 agcaggccga ccgtcatgac cgagttggcg agcatttcga tagcggcatc gaaggcctga
     2281 ccctcgggat cctcggactt gtgctcgtcg gccgtcggct gcagcactgt ttccagatcg
     2341 atgggcaccg ggtgatcgcc cgcggcgatc aagttctcct gatgcatgtc ggtcgcggcg
     2401 aaagagtgca ggagcgcgag ccaggcgccg gcccgccgga agaaccgccg gcaaccttcc
     2461 gcgtcggcgc atcccgcgtg cgtgatgaat tcggtccagc catagccgtc gcgcgcgatg
     2521 gcgcgcacgg gcctcagttc caccggggca tcgctccggt tcaaccgatc gatcaaggcg
     2581 cgccaggcga tgtcgagccg cagatccttg ggcttgtaaa cgacccgcgc gccatcctcg
     2641 aagccgacaa tgaggaccga gcggccgcca ttgtgcggat cggaaagacc gccttcgatc
     2701 gcggcgaccc ggccggcggc gccggcgacg agaatatcgc ggcggatcgg cgcgaggtcg
     2761 gcgtcgagcc ggaggacgaa ttcgcgcgcc gcttcgatcc actgccgcgt gagggtggcg
     2821 acgagccgca acaggaccgg cttgtcctcg aacagacgcc ggaacccgcc gcctttcatt
     2881 tcggccacga actgatcgta gagcgatgtc gaggccgagg cggtctgcgg cgcccgtgcc
     2941 gtagcgggcg gcacggctgc ggccttgcgc gcctggtcga agcgctcgta gagcgccggc
     3001 gccgtgagcg tggacagttc gtcgagcagc gaacggcgca ggctggcgcg ggcggattcg
     3061 gtcaggttgt tcagtgcgcg cgcatcgacg ttcgagcaaa gccgcgcctc ggcttcgagc
     3121 acgaccggcg ccagcaggtg ttcgaacgcg caaggttcgg ctcggtcgtg cgcggcaggt
     3181 tgcttggcgt cttcgccagc gctttgcaat gctgcgtcta tccagatcgc gtcggcgatc
     3241 catggcggcg gcgcggccga cggcttgcga cgaatgctgg cgaaccgggt gagcgcctgc
     3301 gcgagggtca gcccgtcgcg catcagccgc cgttcaaaca gcgaccagtc gccgctggcg
     3361 catgaccggc accatgcggc gaggcggcgc ccggcgagat cggcgtcgcc cttctgaccc
     3421 ggcaggggtt cgaaatcagc tgacaggagc tcgtcgatgg ttgcggcacg aacgatcaag
     3481 cgttcgtaga aggcgtccat ccggtcactc tccgaggggc ttctcgcttg gtggccacgg
     3541 gcgggccatt ctattgccgc ggagcctcat gtcatccgcg gcggctccgg ctgcccgatc
     3601 cggcgggtgg tgcgccttgc gccgcacaaa tcgcggcggc ggtcgggcgg ttcgtctcgg
     3661 atctttagcg ctttgatcta tgggccgctg cgacatcgtg tcaaagcgac ctgtcgtttt
     3721 caatagatcg caaccgtaga ctgcgggctt ttgcatgaac caaaggtgta cggcgcgact
     3781 tatactgcgc ggttggcgca gcgaacgtgt taagaacatt gtccgctacg actttacaat
     3841 gtacgcagtg aatgatttaa tatggtgttg gtgtgggggt ttagccctat ttctcctcct
     3901 acctgataac tgccggcgcc gctggcgaac gaaaggatca atgccatgaa tgagaagatc
     3961 atcgaccagt ttgaagacga ggtgctgagc tacgaagtct ccgacgaggc tcttgagtcg
     4021 gccggcgcga ctgagatcgc gggggcgtgg acggtcgttt gcaccggcat tcagtgcccg
     4081 ggttgatcag cagctggtcc tagcttcttc atttcgtcag tgactgccgg agtgttaagt
     4141 ctccgacatg aggcgccgga ggccacggcg cctcttcttt ttctctgtcc tgtctgacct
     4201 gctggcgcat gaaggggtca aacaatgaat ggcaccacta tcggtctcga ccagacggaa
     4261 gccgaggccc tcagttacga aatctccgac gaggcgcttg aggccgcggc ggggagcgat
     4321 gcgctggcca actggacgat gttctgcacc ggcattcagt gtccgggctg agcgctcgac
     4381 aggctctcgt cttccgcttt tacgcctgac tgtctgagcg atgggtctcc ggcgacgcgc
     4441 cggaggccca cattttttcc ttctacccgc tccggcctgc ggtcactgcc gtcggaaggt
     4501 ggtttggatc gggcgaacgc cggccggcag gttggcgctg tccgctcgtc cagaccctca
     4561 ggaccggcac ggccggagct ttcgcgctgc atggttttgc ttgccccgtg ggtcctccat
     4621 gccccgacca tccttggcac caaggatgat ttttgccgac gcgcctttta tatgtcccgc
     4681 aattctcgcg cggttgccgc gattgccggc cgcgtgacgg tgcgccgtct gcggccgctc
     4741 tgccgcgtat ctcggaacgt gcgcgacctt ggcggatgcg tgagtcgtcc gaaatgtatc
     4801 agtgcgcccg cggccggcgg agcgccggca ggacgtgttc ccgcgggagg ggcgcgtgct
     4861 atacgggctt gcgcgagtgc gtcatctcgc cgagcgtgag tgcgccgccg gtcgcgggga
     4921 aggcgcccat ctcgcccgca gggcgaggac cggcagtttc attgaggaaa agatgagcag
     4981 cgctaacttc gatccggccg cgatcctcaa ccgcgccctc gagcttgcga cacagaatct
     5041 ccgggtcgaa aaggtgctga tccagcttgg cctcgatccg agccacattt cctatgaagc
     5101 ggtgttcaac cggctcgtcg acgttgcgct cgcgaacatc actttcacca acctcctcgc
     5161 gctcaccggc gcgagcttgt atgtcgccac cctgatggtg cgcacgatcg tgccgttgcg
     5221 cgtgctcggc atcgtcagca tggtgttctt catcgcctac ggcgcgctcg ccggggcggt
     5281 ggcgacgttc ttcctctatc tcctgtcgct gccgatcaac gtcatccgcc tgcgccagat
     5341 gttgaacctg gtcaagaagg cgcgcatgtc cgcgcaaggc gatctgtcga tggattggct
     5401 gcggccgttc atgactccac ggaagtatcg cagcggcgag gtgctgttcc acaagggcga
     5461 tgtggcgaag gagatgttcc tcacagtcac cggcaaattc ctggtgaacg agatcaacgt
     5521 cgagctgcca cccggccgct tcatgggcga actcggtttc gtcgccccga agaaccggcg
     5581 cacgcagacc gtcaagtgca tcgaggacgg cgacgttctc accatcacct acgagaagct
     5641 cctcgagctc tatttccaga acccggagtt cggctattat ttcctgcgcc tgaccagcga
     5701 gcggctgatg cagaacattt cgcgcctcga agccttgctc gaagcgacca aggcgagccc
     5761 gcgttaggga cttgcgatga acacagcctt gccggccctt cccgtcgtcg atatccgcga
     5821 gggcgggccg ctccatcacg cgcgccaaag cgcgaccacg gcgcgcgcgc tgcgcgacgc
     5881 ctgtctcggc tttttcccgc gcgcggcgct gccgctcgtg ccggcgttcg accgcctggc
     5941 gcggcgctgg cttgcgcgtt cgcgctcgcc gtatttgccg gagatcgccg agatcgccgc
     6001 gacgctcaac ttctcgggcg tgtggttgct caacgcctcg tatcaatggg gttgtacggc
     6061 gctcgcctgc gaacgggacg gcgcgccctg gttgatgcgg acgctggatt ggccattcac
     6121 cggccttgga cgtcacaccg agcttgcgca tatgcgcggc gagcatggcg atttcttcag
     6181 tgtcacctgg ccgggctatg tgggcgtgct cactgcgatg gcgccccggc gcttcgcggc
     6241 gagcgtcaac caggcgccaa tgcggcgccg caccgggcac ccctggctgc ggccgtacga
     6301 cttcgccgcc aatgcgctcg acgtttgggc gtgctccgac tgcgtgccgc cggatcagct
     6361 tttgcgccgg acgttcgaaa cctgcgacgg ttacgccgcg gcgcggcggc tactggagcg
     6421 cacgccggtc gcgcgcccgg tgatctacac gctcgtcggc tgcgcagcgc acgagcgctg
     6481 cgtgatcgag cgcaccgaga ccgatttcct cacccgcgag caggaaacca gcgcggccaa
     6541 cgactggctg ccgacgcggc cgggctggga gggacggatc ggcacacgcc gattcctggt
     6601 gagcacattc gcggaggcgg caggcttcag ccgcgcgcgc cgcgaaacgc tggccgcctg
     6661 gagcggcccg ctcgcggatg ccggcttcga ctgggtatgc gcaccggtcc tcaatcccta
     6721 cacccggctc gcggtcgcga tgtcgccggc acgcggcatc ctgcgcgccg tgggctacga
     6781 cgttgccggc ggcgatttgc cggagccggt gacgcggccg tgcgagatcg agaatctcgc
     6841 gcaggcggct tgacgcgcgc ggcggccatt gcccagtcga gcggcgctgc ggatgctgcc
     6901 gtcatggcag aaaaaggcgg cgcatcagca gcttgcggca aaatccgatt tctcccgtaa
     6961 aagcgacgga ctgtgctttc catcacattg tccgaagggg gatcagctta gcgtccatta
     7021 aacgccagta atggagcgag ctatgagcac gatgaagcat agcgccgcta actcccgtgt
     7081 cttccgctcg tcgccatgga gtgcggtgcg tacgttgatc gttgaatggc gacggcgcgt
     7141 tcgttcgcgc tacgagctga ggagcctggg cgacgccgaa ttgcgcgaca tcggcctcac
     7201 gcgcggtgag gccgatttcg accaatcgaa atcgttctgg ctgagctgaa gcaagcagtg
     7261 cgcggtgagg gccgggccgc ccgcgagggc ggcccgtttg ctttcgggcg gcgccttgcg
     7321 ctatctgcgg tcggccgctc cgccgcgggc gcggacggcg cgaacgggag gtgccgggga
     7381 tgcccacagt cgcgagtacg gacggcacga agctctatta cgaagaagca ggcagcggaa
     7441 caccgatcgt gttcgttcac gagtttgccg gcgactatcg gacctgggag ccgcagctgc
     7501 gctatttttc ccgcgcgcat cgctgcgtcg ccttttccgc gcgcggttat cctccctcgg
     7561 aagtgccgcc cgatccggcg cgctacggtc aggacatcgc ccgcggcgat gtcatcgccg
     7621 tcatggatgg gctcggcctt aagaaggcgc acgtggtcgg ccattcgatg ggcgcctaca
     7681 ccgccctcca tgtcggcatc cggcaccccg agcggtgcat ctcggtgacc gccgccggct
     7741 gcggctgggg ctcggtcgcc gatccggccg tgcgtgaggc gatgcgcaag cttgccgtcg
     7801 agacggctgc gatgttcgcc gagaaaggca tggccgaggc ggcggtgatc tacgccgata
     7861 caccgacccg ccacgcccag aaatacaagg atccacgcgg cttcgccgag ttcgcccgta
     7921 tgctcggcga gcattccgcg cagggtcacg cgctgaccat gtcgatgctg caagccaagc
     7981 gcccgacgct gtgggacatg gaagcggacc tcaagcgatt ttctgtgccg ctcctcgtca
     8041 tcgtcggcga cgaggacgaa acgtgcatcg atggcagtgt ctttctcaag cgcacggcgc
     8101 caacggccgc gctcgccgtc attccgcgct cggggcacaa catcaacagt gaggagccgg
     8161 cagccgtcaa tgctgcgctc gccgatctgt tcgcagccgc cgaaagcggg cgctggctcg
     8221 cgcatcggcc accggcctga gccctgtcct cgcctcgttc actcgcgttg cggcagcgcc
     8281 tatgccgcga cgtccgccat cagccgccgg aaacatgcgt cggcgacggc cgcaagatcc
     8341 gcaccttgag tcttgctgat gatgaagtcg gcggcgacaa agccgtattg ctgcagcgtc
     8401 tccatttcaa tctcagtcgg cgtgtgcaca ttcgcgaagt gggtcgagac cacgcctacg
     8461 cacttgccgc ccgcggcgat gaacggcgtc gactgcatgg cgcgaattcc catcgtgttc
     8521 gcaagctgat gatacggcgc caaggcccga tccttggaca gatcgggaat gaccacggat
     8581 ttgcgggcgg cgaacgcacg ggcgctggcg gcgccgccgt cgctggccac ccgccgcagg
     8641 ctacgcagcg acggctcgtc gaagccgcgg tgctcgatga gcgccagggt gtcgtcgtcg
     8701 atcgcaagct gaatgttgcc gaactcggcg ccgtgcaggg cgatcacgtc gttgaggatg
     8761 gtgcgcaagc cccccgccag cgtgttctgg ccaagcagcc gagcggtcat ttgcggaagc
     8821 atggcaagca aaaatcgcca gcgttgggct cttctgaaat ccccacgcga caatagaacg
     8881 caaatgggaa gctcttgtgg cgaaatttca ccgacatcgt gcgcccctca aggcgggtga
     8941 cggactcggc aaggctttcg ccaggcgtca gagccggcgc agcggcatcg accaggcgag
     9001 ccacgccccg atgcccgtga acgctgcgat ggtgacgaag gcggcgcgga aggcatcgcc
     9061 gatctgcatc tggacggcga cttgccgcac cggcgcgagc gaagcgatgg cgtcgggacc
     9121 gcggtcgaga atcataccga aaaggctcgc cctttccggg tcgccagccg cgagcacgga
     9181 aaacaggacc gccgccaccg ccgccgtgcc caaggcggcg ccgaccgagc gcgagaactg
     9241 caccatggcg gcgccggcgc cgagcatccg ctgaccggcg atcgcctgca ccgtgacctg
     9301 gaccacgccc atgaccgtgc ccatgaacaa ggccgtgccg ccgaacaccc acggcagctg
     9361 tgacagtgtc aaatgcggta cccagaaagc gaggaacagc aagccggccg tcgccgccac
     9421 atatccgtag gaggggaata tcgcggtgcg tccggtgcgc gtcaccaact ggccggtgat
     9481 cagcgaacca aggccgacac cgaaggtcag cggcagcaac agcaagccgg tctcggctgg
     9541 gcccgtgccc cgtgccgcgc gcagatacat cggcaggaac gtgatcagcg acacgagtgc
     9601 ggcgccgtgg caggcggcaa ggccggcgcc gcgccagacc gaaggctccc tgaacaggcg
     9661 cggcggaatg agcggcgagg cgctgtgccc ttcctgccag atcagcagca gcagcgatac
     9721 tgtcccaagc gccagcaggc cgagaatttc cggcagcgaa ccggcggtca tgcgttgcac
     9781 ctgggcgagg gcgaaaatga ccgggcttac gaacaggatg aacagcacca ggccgggtgc
     9841 gtcgaacgtc gtgcgccgcc ggtcgccggg gcgcgcctcg aggcgcagca cgaggaggac
     9901 ggcgccgagt ccgagcggga tgttgacgag gaagatcgag ggccagccga aagcctgggt
     9961 gaggtagcca cccgcgaccg gcccgaaggt gcttgagctc accatcacgc cagcgaggta
    10021 gccttgatag cggccgcgct cgcgcggcgg aatggtttcg ccgatcagcg cctgcgacag
    10081 cgtcatcagc ccgccgccac cgaatccttg cagcacgcgc gccgcggtca gccagttgat
    10141 ggtcggcgcc agggcgcaga acacggagcc ggtcatgaaa accacgagcg ccacgagcat
    10201 catgcgccgg cggccgaacg aatcgccgag gcgcccgtag accggagcgg cgatggtgtt
    10261 ggcgatcaga taggacacca ccacccagga cacccgctcg acaccgccga ggctcgaggc
    10321 gatggccggc agcgcggtgg cgacgatggt ctgatccgcc accgccataa acatcggcag
    10381 catgatcgac ggaaagaccg tccagaacag cgatcggggc gcgtgcggcg cgctcggctg
    10441 ggctgcggtc tcgacgccgg gaggcgcgtc ggctgtgccg cgcgaaatat cttcggtcgt
    10501 cgaatgagtc atgccgacat ttttttaaga gtttcttgta gccgaaattg tctcgtgagc
    10561 aatcacatgg gcaacccgca cgagccgcgg caacggcgca ttcgcgaacg gcgcgtgaac
    10621 ccggcgcgcc gttgcggccg cgtgacacgg cgccggttcc gctgttccca caatcatcca
    10681 agccccttca atgccggcgg agagaagcta taatacgctg gatcgagggt gggcgtcgcc
    10741 ggcttgccaa gccggcggta gcgggtggct cgcaaaccaa aacagcggga gccacgcatc
    10801 atgcctcaag aacacccacg caacgaaagc cagcgctccg acaatccgcg cagcgagagc
    10861 ctgcgctccg agcatctccg cggcgaaaag tcggccggcg ccagcgccgt caacgcccag
    10921 ttcgccgaga tgggggcgaa gagcgtcact gccggcctgc gcatgcaaaa ggaactattc
    10981 gaaaccttcc aggacatcag ccgcgactgg ttcgcgcgcg cgacgtcgga ggcggagttg
    11041 gcattcaagc tgccgcggca gctgaccaat gcgcgctcgg tgcccgacgc aatgtccgcg
    11101 taccaggaat ggctgaacga atggctgagc atgtgtggcg aggacgggcg gcgcctcatc
    11161 tctgacggcc agaagatcat ggatactggc gcgcgctgct tcgccaacgc ctcgcccacc
    11221 gccaacagct gacgctacgg catcagactg atgatagccc gcatgcccac ggcacagcga
    11281 cgcgctgtgc cgctgcgaga ctgtgacggc gttgcgggac gaggcgcgaa caaaaatgga
    11341 cgcgattgag gcgtagacac gcatcgaccg ttcgctggcg cggcctcttt cggaaacgcc
    11401 aaccgcctcc tcgctcggtc ggaaatcgga catagcgctg cacggcagcg tgctggcgtg
    11461 cacgtgcatt ttcggaacga ttgcagttgg ttcgcgttcc tttgctgcgg cgatgccaag
    11521 aacggtgccg tcactcgatg cggctagcct cgggtccgtc gccccgaggt tgcggcgaag
    11581 cggcctcgag aaagctgcgg ccctgcggcc gttgtcttgc gaggctcgct tcgctcgcat
    11641 cgcggcgaaa cgccgctctc atttctcggt gaacatttgc gtgaacatgt acacggctgc
    11701 ggctgacgac ggccgtatca gaggcagcgg cgaaattaag ctcgtgctta ccaagtgaaa
    11761 aaagaccggc cgcccgaagg gcagccggcc tcaagagcgc ctgccgcctt acggcggagg
    11821 cgagcgtccg gaatgtgcct cagccgagaa agccgacgcg ctcctgctcg cgggcctctg
    11881 ccgcggtggt cggtttcgcc ggcagctgca gcacggtcgc cacctgcccc tcgcacagga
    11941 gcgtcaacag cacggtgcgc ccatcaggaa attccagcgc atcgtgatgt gcggccaact
    12001 tgtccttgtt gacctggcgg aaaatggccg tctcatggtt gatcgtctgt gtcttccagc
    12061 cgagcaggcc ggccggcagg caggcgatct gggcggtgaa ggccaattcg gtgcccggca
    12121 gcaagcacac cgccatgccg ggatcggcgg cggcggcgaa tccgcgcgtc ccggtgccga
    12181 aatctcgcgt caccagctta tcgccgactt tcgccggccg cgagcgcacg ctttggaggc
    12241 taaagtcaca cattggcagt cctttctccc cgggcgatcg tcccgggtct tcccatgaca
    12301 acccc
//
LOCUS       DATMQB010000469         2564 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1803669, whole genome shotgun sequence.
ACCESSION   DATMQB010000469 DATMQB010000000
VERSION     DATMQB010000469.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2564)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2564)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2564
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1803669"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(34..1479)
                     /gene="ntrC"
                     /locus_tag="VNY79_13635"
     CDS             complement(34..1479)
                     /gene="ntrC"
                     /locus_tag="VNY79_13635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000156 - phosphorelay response regulator
                     activity [Evidence IEA];
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006808 - regulation of nitrogen
                     utilization [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(I)"
                     /protein_id="HWX73536.1"
                     /translation="MPAGSILVADDDAAIRTVLNQALSRAGYEVRSTGNAATLWRWIS
                     QGDGDLVITDVVLPDESAFDLLPRIKKARADLPIVIMSAQNTFMTAIRASERGAYEYL
                     PKPFDLKELIAIVGRALSEPKERPRAPVKAEDFESIPLVGRSPAMQEIYRVLARLMQT
                     DLTVMISGESGTGKELVARALHDYGKRRSGPFVAINMAAIPRDLIESELFGHEKGAFT
                     GANTRSAGRFEQAEGGTLFLDEIGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKADVRI
                     IAATNKDLRQLIQQGLFREDLFFRLNVVPLRLPPLRERTEDIPDLIRHFFAVVEREGL
                     PLKQIDQAALERLKRHRWPGNVRELENLGRRLAALYPQETITAAVVDAELAQPALVTP
                     GESQRGEENLSSTVERYLAHYFSEFDDGLPPPGLYHRILREVEGPLLSAALTATRGNQ
                     IRAADLLGVNRNTLRKKIRDLDIQVYRTGGG"
     gene            complement(1479..>2564)
                     /locus_tag="VNY79_13640"
     CDS             complement(1479..>2564)
                     /locus_tag="VNY79_13640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013166592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitrogen regulation protein NR(II)"
                     /protein_id="HWX73537.1"
                     /translation="LPHPVIVVSADGKVADANVAAEAFFEVSLPLLRRYLLHDLVPFG
                     SPLLTLVDQVRTRGAAVNEYKVDLGTPRNPGERVVDLHVAPLPERPDYVVVMLQERTI
                     ADKMDRQLTHRGAARSVIALAAMLAHEIKNPLSGIRGAAQLLEQSVEDDDRTLTRLIC
                     DETDRIVKLVDRMEVFADERPVEREPINIHVVLDYVKRLAQSGFARNIKFVEDYDPSL
                     PPVLANRDQLVQVFLNLVKNAAEAIGENANSGEIALSTAFRPGVRLSIPGARARISLP
                     LEFCVKDNGPGVPDELLPHLFDPFVTTKPSGSGLGLALVAKIVGDHGGIIECESQPRR
                     TVFRVLMPIYASGGAARNGSKEPRGEL"
BASE COUNT          403 a          837 c          882 g          442 t
ORIGIN      
        1 atgcgcaacg tggctgggcc cgaaagcccc caactatcct ccacccgtcc gatagacctg
       61 gatgtcgagg tcgcggatct tcttgcgcag ggtattgcgg ttgacgccga ggagatcggc
      121 ggcgcggatc tggttgccgc gcgtcgcggt cagcgcggcg gagaggagcg gcccttccac
      181 ctcgcgcagg atgcggtgat agaggcccgg tggcggcagg ccgtcgtcga attcggaaaa
      241 atagtgcgct aggtagcgct cgactgtact tgagaggttc tcctcgccgc gctggctttc
      301 gccgggcgtg accagcgccg gctgggccag ttcggcgtcg actacagccg cggtgatcgt
      361 ctcctgcgga tagagcgcgg caaggcgccg gccgaggttt tccagttcgc gcacgttgcc
      421 cggccagcgg tggcgcttga ggcgctcgag cgcggcctga tcgatctgct tgagcggcag
      481 gccttcacgc tcgaccacgg cgaagaagtg tcggatcagg tcgggaatgt cctcggtgcg
      541 ctcgcgcagc ggcggcagcc gcaacggcac aacgttgagc cggaaaaaca gatcctcgcg
      601 gaacaggccc tgctggatga gctggcgcaa atccttgttg gtcgcggcga tgatgcgcac
      661 gtcggccttg atcggcgtgc ggccgccgac cgtggtgtat tcgccctgct gcagcacgcg
      721 caggagccgc gtctgcgcct ccatcggcat gtcgccgatc tcgtcgagaa agagcgtgcc
      781 gccttcggct tgctcgaaac ggccggcgct gcgcgtgttg gccccggtga aggcgccttt
      841 ctcgtggccg aacaattccg actcgatcag gtcgcgcgga atggccgcca tgttgatggc
      901 gacgaacggg ccgctgcgcc gcttgccgta gtcgtgcagc gcgcgcgcca ccagctcctt
      961 gccggtgccg gattcgccgc tgatcatgac cgtgaggtcg gtctgcatca gccgcgccag
     1021 cacgcggtag atttcttgca tcgccggcga gcggccgacc agcgggattg attcgaagtc
     1081 ctcggccttg actggcgctc gcggccgctc cttcggctcg gacagcgcgc ggccaacgat
     1141 cgcgatcaat tccttgagat cgaacggctt cggcaggtac tcgtaggcgc cgcgctcaga
     1201 ggcgcggatc gcggtcatga acgtgttctg cgcactcatg atcacgatcg gcaggtcggc
     1261 acgcgccttc ttgatccgcg gcaacaggtc gaaggcgctt tcatccggca gcaccacgtc
     1321 ggtgatgacg agatcgccgt cgccttggct gatccagcgc cacagcgtgg cggcgttccc
     1381 ggtcgagcgc acctcgtatc cggcccgcga cagcgcctgg ttgagcacgg tgcggatcgc
     1441 cgcatcgtca tcggcaacga gaatgcttcc cgccggcatc acagctctcc ccgcggctct
     1501 ttgctcccat tccgggcggc gccgccgctc gcgtaaatcg gcatcagcac gcgaaagacg
     1561 gtccgtcgcg gctgcgactc gcactcgatg atgccgccgt gatcgccgac gatcttggcg
     1621 acgagcgcga gccccagccc cgagccgctc ggcttggtgg tgacgaacgg atcgaacaga
     1681 tgcggcaaca gctcgtcggg tacgccgggt ccgttgtcct tgacgcagaa ttcgagcggc
     1741 agcgagatgc gcgccctggc gccggggatc gacaggcgca cgccgggacg gaaggcggtc
     1801 gatagcgcga tctcgccgct gttcgcgttc tcgccgatcg cctcggccgc gttcttgacc
     1861 aggttgagga agacctgcac gagctggtcg cggttcgcca gcaccggcgg cagcgacgga
     1921 tcgtaatcct ccacgaattt gatgttgcgg gcgaagcccg attgcgccag ccgctttacg
     1981 tagtcgagca cgacgtggat gttgatcggc tcgcgctcga ccgggcgctc atcagcgaac
     2041 acctccatgc ggtcgacgag cttcacgatg cggtcggtct cgtcgcagat gaggcgcgtg
     2101 agcgtgcggt cgtcgtcctc gacggattgc tcgagcagct gcgcggcgcc gcgaatgccc
     2161 gacaacgggt tcttgatctc gtgggcgagc atggcggcga gcgcgatcac cgagcgcgcc
     2221 gcgccgcggt gggtgagctg gcggtccatc ttgtcggcga tggtgcgctc ctgcagcatc
     2281 accacgacgt agtccggccg ctcagggagc ggcgccacat gcaggtcgac gacgcgttcc
     2341 ccgggattgc gcggcgtgcc gaggtcgacc ttgtattcgt tgacggccgc gccgcgggtg
     2401 cgcacctgat cgaccagggt cagcaacgga ctgccaaacg gcaccaggtc gtgcagcagg
     2461 taccgccgca gcagcggcag cgaaacctcg aaaaaggctt ccgccgccac attggcgtcg
     2521 gcgaccttgc cgtcggccga cacaacgatg accggatgcg gcag
//
LOCUS       DATMQB010000470         8373 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1804805, whole genome shotgun sequence.
ACCESSION   DATMQB010000470 DATMQB010000000
VERSION     DATMQB010000470.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8373
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1804805"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..537
                     /locus_tag="VNY79_13645"
     CDS             <1..537
                     /locus_tag="VNY79_13645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007613531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HWX73538.1"
                     /translation="TRLLANPWIADAAVLKLYPDRLQITITERRAFALWQKDRRVGVI
                     AADGTVLEPFVEDRYVRLPLVVGRGAERQAKDFLAILDRYPDIRSQLRASIMVADRRW
                     NLRLKNGIDVRLPETNVEQALDRLVALDREKKILSRDILAIDLRLPDRVTVRLSDAAA
                     AAREEALKDKKKKKGGEA"
     gene            534..1856
                     /gene="ftsA"
                     /locus_tag="VNY79_13650"
     CDS             534..1856
                     /gene="ftsA"
                     /locus_tag="VNY79_13650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009337115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0043093 - FtsZ-dependent cytokinesis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HWX73539.1"
                     /translation="MSALHYGLTPKMKPISPRRSGLVAALDVGSSKVACLIARLSPHP
                     PQQVLMRRSHAIEVLGFGHTEARGTKAGAVVNLAHAEESIRQAVDWAERMAAVDIESI
                     VLSISAGRLASESFAAEVEIVGSAVSEGDIARLLAVGSRHSLREGRAVLHSLPVGYSI
                     DGGNGIRDPRGMLGERFGVDMHVATTDLTAARNVMLAVERCHLVVEAMVASPYVAGLA
                     VLADDEADLGAAVIDMGAGTTTVAVFLSGRFVHADGFALGGHHVTMDIARGLNVRIDD
                     AERIKTFYGSVLVGGSDERDMVTVAHVGEETREAPQFVSRSALVHIIKPRVEEILEMA
                     RDRLAASSFAAEPRGRVILTGGASQLNGLPELAARIFDRPVRIGRPLGIGGLPDAAKG
                     AAFAAAAGLLVYPQAAHLEHFETRGARYLMSGKGGYLARVGQWLRESF"
     gene            1953..3662
                     /gene="ftsZ"
                     /locus_tag="VNY79_13655"
     CDS             1953..3662
                     /gene="ftsZ"
                     /locus_tag="VNY79_13655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012562411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003924 - GTPase activity [Evidence IEA];
                     GO_process: GO:0000910 - cytokinesis [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HWX73540.1"
                     /translation="MTINLKIPDIRELKPRITVFGVGGAGGNAVNNMITAGLQGVDFV
                     VANTDSQALTLSKSERIIQMGVAVTEGLGAGSQPDVGRAAAEEVIDEIRDHLSGAHMV
                     FVTAGMGGGTGTGAAPIIAKAAREVGILTVGVVTKPFHFEGQRRMRIAENGITELQKS
                     VDTLLIIPNQNLFRVANEKTTFADAFAMADQVLYSGVACITDLMVKEGLINLDFADVR
                     TVMREMGKAMMGTGEAEGDKRALTAAEAAIANPLIDDASMKGAKGLLISITGGRDLTL
                     YEVDEAATRIREEVDQDANIIVGATFDEGLDGIIRVSVVATGIDTAVAQRPPVAAAES
                     RIAEVAQRLRASETPRVGEPVERTEPVKPAAAAPAAAPASVNDSIESAKAAIVAAIMP
                     SRTGEEVTIRPLAPKPSLFIDPASEGPEMREPKAFIPPQPERLPPRTPRMPRVDELPV
                     PAQNEIRARRGQLAPQEHPEKRRMSLLQRLAQVGLGRREHDEEEGPPTPQRRPMGAQQ
                     PTIERLPGRPLPPESRPDPISEYAKRPMPQGLDHHGRQAPVHNHSEEDQLDIPAFLRR
                     QAN"
     gene            4069..5034
                     /gene="lpxC"
                     /locus_tag="VNY79_13660"
     CDS             4069..5034
                     /gene="lpxC"
                     /locus_tag="VNY79_13660"
                     /EC_number="3.5.1.108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002712897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008759 - UDP-3-O-[3-hydroxymyristoyl]
                     N-acetylglucosamine deacetylase activity [Evidence IEA];
                     GO_process: GO:0009245 - lipid A biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-3-O-acyl-N-acetylglucosamine deacetylase"
                     /protein_id="HWX73541.1"
                     /translation="MTRGTHAGRQTTLREQVTLSGIGIHSGSPVTLTLHPAEPDTGIV
                     FLRCGAGGQADRELPANFRSVTATEFATVLGDHTGPAVSTTEHVLAALYALGVDNAVV
                     EVDGPEVPIMDGSAAPFVAAIDQVGIETLSAPRRYIQVLKPIRVGKNGCHGELRPHLR
                     GLRIETEIEFDHPLIGRQTLAIEVEPDVFRRELARARTFGFMRDVAKLWSAGYALGAS
                     FENTVVAADNRILNAEGMRFPDECVRHKAVDAIGDLALAGAPLIGAYHSVRGGHKLNH
                     AVLSALMADPSAWTYVEMPEVVRRARGHAELAAGFAAPAYGPDVS"
     gene            5172..6038
                     /locus_tag="VNY79_13665"
     CDS             5172..6038
                     /locus_tag="VNY79_13665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013501592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="outer membrane protein assembly factor BamD"
                     /protein_id="HWX73542.1"
                     /translation="MTLWPRRTHGSGSRLRALAGLLALVLLAAPLLGCSLFNKDEDYV
                     PDDPADKLYNQGLFLLNQKQDYDAAAKKFDEVDRQNPYSDWARKALLMSAYSYYQAKK
                     YDDCINAAKRYVTLHPGSPDAAYAQYLIGASYYDQIQDVNHDQARADRAVGALSEVMR
                     KYPDSEYAQNAKKKIEMARDQLAGKEMEIGRFYMKRRDFTGAINRFKVVVTQFQTTRE
                     VEEALARLTEAYLSLGIIDEAQTAAAVLGHNFPESPWYKDAYNLMKSAGVEPSENKDS
                     WISRAFKKLGLG"
     gene            6148..7812
                     /gene="recN"
                     /locus_tag="VNY79_13670"
     CDS             6148..7812
                     /gene="recN"
                     /locus_tag="VNY79_13670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006310 - DNA recombination [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HWX73543.1"
                     /translation="MLARLSIRDIILIDRLDIDFGAGLAALTGETGAGKSILLDAFAL
                     ALGARGEAALVREGAVQGQVTAVFELGKEHPARRLLAENGLASEDELIVRRVQIADGR
                     TRAFVNDQPVSVQVLRALGAALVEIHGQHDERAFIEAGTHRALLDAFGGLEAAAAEVR
                     GLWQERRAREAAVAAHRADVERAGREAEWLRHAVEELGRLAPERGEEAALAERRAAMM
                     QAEKVAEDLRLTHESVTGPQSPVPPLATAVRRLERRAAQAPALIEPAVKSIDAALTAL
                     DEARAHLEQALRVAEYDPRELERMEERLFALRAAGRKYNVPVDELGALARRYEADLAL
                     IDAGAERLAKLEQEAREVAARYRQAAEALSAARRGAAVTLDKAVNAELKPLKLERAQF
                     STEIGGDGEGPDGLDRAEFWVRTNPGTRPGPLMKVASGGELARFLLALKVVLADRGSA
                     PTLIFDEIDTGVGGAIADAIGVRLARLAARVQVIAVTHAPQVAARADRHYLIAKDALA
                     KGRRVATRVSELAAERRREEIARMLAGAEITAEARAAAERLIRAAG"
     gene            7985..>8373
                     /locus_tag="VNY79_13675"
     CDS             7985..>8373
                     /locus_tag="VNY79_13675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012029226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HWX73544.1"
                     /translation="MASKDTAKLPVEPLTEKQAKAEHARLAEEIAAHDRRYYQEDAPT
                     VSDAEYDRLRQRYAAIEARFPQLRTLDSLTQRVGAAPAARFAKVRHAVPMLSLDNAFA
                     DEDVVDFVGRIRRFLRLGEDDEIVFSA"
BASE COUNT         1421 a         2858 c         2818 g         1276 t
ORIGIN      
        1 acgcgcctcc tggcgaatcc ctggatcgcg gacgccgccg tgctcaagct ctatccggac
       61 cggctgcaga tcaccatcac cgagcgccgg gcttttgcgc tgtggcagaa ggaccgccgg
      121 gtcggcgtca tcgccgccga cggcaccgtg ctcgaaccct tcgtcgagga ccgctatgtc
      181 cgcctgccgc tcgtggtcgg acgcggcgcc gagcgacagg ccaaggactt tctcgccatc
      241 ctcgaccgct accccgacat tcgatcgcag ttgcgcgcct cgatcatggt ggccgatcgg
      301 cgctggaatc tgcggctcaa gaacggcatc gacgtgcggc tgccggagac caacgtcgag
      361 caggcgctcg atcggctcgt ggcgctcgat cgtgaaaaaa agatcctgtc gcgcgacatc
      421 ctcgccatcg atctgcgcct gccagaccgg gtgaccgtgc gcctctccga tgcggccgcg
      481 gccgcgcgcg aagaggcgct caaggacaag aagaagaaaa agggcggtga ggcatgagcg
      541 ccctccatta cggtctcacc cccaagatga agccgatctc gccccggcgc agcgggctcg
      601 tggccgcgct cgacgtcggc tcgagcaaag tcgcctgcct gatcgcgcgg ctgagcccgc
      661 atccgccgca gcaggtgctg atgcgccgca gccatgccat cgaggtgctt gggttcggcc
      721 ataccgaagc gcgcggcacc aaggccggcg cggtggtcaa tctcgcgcac gccgaggaat
      781 cgatccgcca ggccgtcgac tgggccgagc gcatggccgc ggtcgacatc gaatcgatcg
      841 tgctctcgat atcggccggc cgtctcgcca gcgaatcgtt cgccgccgag gtcgagatcg
      901 tcggctccgc ggtatccgag ggcgacatcg cccgcctcct cgctgtcggc agccgccatt
      961 cgctgcgcga gggccgcgcc gtgctgcatt cgcttccggt cggctattcg atcgacggcg
     1021 gcaacggcat tcgcgatccg cgcggcatgc tcggcgagcg gttcggcgtc gacatgcatg
     1081 tggcgaccac cgatctcacc gcggcgcgca acgtgatgct ggcggtcgag cgctgccacc
     1141 tcgtcgtcga ggccatggtg gcgagcccct acgtcgccgg ccttgcggtg ctcgccgacg
     1201 acgaggccga tctcggtgcc gcggtcatcg acatgggcgc cggcacgacg accgtggcgg
     1261 tgttcctcag cggccgcttc gttcacgcgg acggctttgc gctcggcgga caccacgtca
     1321 ccatggacat cgcgcgcggg ctcaacgtcc gtatcgacga cgccgagcgc atcaagacat
     1381 tctacggcag cgtgctcgtc ggcggatcgg acgaacgcga catggtcacc gttgcgcatg
     1441 tcggcgaaga gacgcgcgaa gcgccgcaat tcgtctcccg ctcggcgctc gtgcacatca
     1501 tcaagccgcg ggtcgaggag atcctcgaaa tggcgcgcga ccggctcgcc gcatcctcgt
     1561 tcgcggccga gccgcgcggc cgcgtgatcc tcaccggcgg cgcgagccag ctcaacggac
     1621 tgccggaact cgcggcccgc attttcgatc gcccggtgcg catcgggcgg ccactcggca
     1681 tcggcgggtt gccggacgcg gccaagggcg ccgcgttcgc cgcggcggcg ggcctgctgg
     1741 tgtacccgca ggcggcgcat ctggaacact tcgaaacgcg cggtgcgcga tatctgatga
     1801 gcggcaaggg cggctatctc gcccgcgtcg gacagtggct tcgcgagagc ttctgatgtc
     1861 ccccagcttc gcagcaggac atcacagcgg ccggtggcgg accggcgggg gccgggcgtt
     1921 aaggacgccc gtgcaggaaa gatgaggcaa agatgacgat caatctgaaa atccccgaca
     1981 ttcgtgagct caagccgcgc ataacagttt tcggcgtcgg cggcgccggc ggaaatgccg
     2041 tcaacaacat gatcaccgcc ggtctccagg gcgtcgattt cgtcgtcgcc aacaccgact
     2101 cgcaggcgct cacgctgtcg aagtctgaac gcatcattca gatgggcgtg gcggtgaccg
     2161 agggcctcgg cgccggctcg cagcccgacg tcggccgcgc cgcggcggag gaagtgatcg
     2221 acgagatccg cgatcacctc tccggcgcac acatggtctt cgtcaccgcc ggcatgggcg
     2281 gcggcaccgg caccggcgca gcgccgatca tcgccaaggc ggcgcgcgaa gtcggcatcc
     2341 tcaccgtcgg cgtggtgacc aagccgttcc atttcgaggg ccaacggcgc atgcgcatcg
     2401 ccgaaaacgg catcaccgag ctgcagaagt cggtcgatac gctgctgatc atccccaacc
     2461 agaatctgtt ccgcgtggcg aacgagaaga cgacattcgc cgacgctttc gccatggccg
     2521 atcaggtgct gtattccggc gtcgcctgca tcaccgacct gatggtcaag gaaggtctca
     2581 tcaatctcga cttcgccgac gtgcgcacgg tcatgcgcga aatgggcaag gcgatgatgg
     2641 gtaccggcga ggccgagggc gacaagcggg cattgaccgc cgccgaggcg gcaatcgcca
     2701 atccgctgat cgacgacgcg tcgatgaagg gcgcgaaggg gctgctcatc tcgatcaccg
     2761 gcggacgcga cctcaccctc tacgaggtcg acgaggcggc aacccgcatc cgcgaagagg
     2821 tcgaccagga cgccaacatc atcgtcggcg ccaccttcga cgagggcctc gacggcatca
     2881 tccgcgtctc ggtcgtcgcc accggcatcg acaccgctgt cgcgcaacgg ccgccggtgg
     2941 ccgcggccga atcgcgcatt gccgaggtgg cgcagcggct gcgcgcctcc gagaccccgc
     3001 gcgtcggcga gcccgtcgaa cggaccgagc cggtcaagcc cgccgcggcc gcgcccgccg
     3061 cggcgcccgc gtcagtcaac gactcgatcg aatcggccaa ggccgcaatc gtcgcggcga
     3121 tcatgccgtc gcggaccggc gaagaggtga ccattcggcc gctggctccc aagccgtcgc
     3181 tgttcatcga tccggcctcc gaagggccgg agatgcgcga gccgaaggcc ttcattccgc
     3241 cgcagccgga gcggctgccg ccgcgcaccc cgcgcatgcc gcgggtcgat gagctgcccg
     3301 tcccggcgca gaacgaaatc cgcgctcgac gcggtcaact cgcgccgcag gagcatccgg
     3361 aaaagcggcg catgtcgctc ctgcagcggc tggcgcaggt cggcctcggg cgtcgcgagc
     3421 atgacgaaga ggaaggcccg ccaaccccgc agagaaggcc tatgggcgca cagcagccga
     3481 cgatcgagcg gctccccggg cgtccactgc cgccggaatc gcgccctgac ccgatctcgg
     3541 aatacgccaa gcgcccgatg ccgcagggac tggaccacca cggccgccag gcacctgtgc
     3601 ataaccacag cgaggaggac cagctcgaca tcccggcctt cctgcgccgg caggcgaact
     3661 gagccgcggt tgacgggccg gactgtgccg cgccggcggc tgcggcacgc gccggcccgc
     3721 gatgagacaa tcggcggcag cttcgccggc gtcttgtgga catcctgtgg accgccgcgc
     3781 ggccattgat tcgcttggga agcgatactg cggcaaaagc tttgaggcgc gttgctgaca
     3841 agagtgcggc cagaaaaagg taacagttgg taagaaagcg tgaattggcc tacagcggcc
     3901 ccaccggtat gcttcaactg ttagaggggg agttgttctc gggggatagt agggtagcgt
     3961 ggttacgctt tcagcggaca cggccctttt gtctacgaac cttcacttcc cttcaggtgg
     4021 ggttggccca actgctcgca gtttggccat aaggtgtagg atgtgggcat gacgaggggc
     4081 acgcacgccg gcaggcagac gacgcttcgc gagcaagtca ctctttccgg aattggcatt
     4141 cattccggct cgcctgtcac cctgaccctg cacccggcgg agccggacac cggaatcgta
     4201 tttctgcgct gcggcgccgg cggccaggcc gatcgcgaac ttcctgccaa tttccgttcg
     4261 gtgacggcga ccgaattcgc caccgttctc ggcgatcaca cgggaccggc ggtatcgacc
     4321 actgagcacg tgctggcggc cttgtatgcg ctcggcgtcg acaatgccgt ggtcgaggtg
     4381 gacggccccg aagttccgat catggacggc agcgccgcgc cgtttgtcgc tgcgatcgac
     4441 caggtcggca tcgagacgtt gtccgcgccc cgtcgctaca tccaggtgct caagccgatc
     4501 cgggtcggca agaacggctg tcacggcgaa ttgcgccctc atctgcgcgg ccttcgcatc
     4561 gagactgaga tcgagttcga tcacccgctg atcggacgac agacgctggc gatcgaagtc
     4621 gagcccgatg tcttccgccg cgagcttgcg cgggcacgga ccttcggctt catgcgcgat
     4681 gtggcgaagc tgtggagcgc gggctatgcg ctcggcgcga gcttcgagaa caccgtggtc
     4741 gccgcggaca accgcatcct caacgccgag ggaatgcgtt tccccgacga gtgcgttcgc
     4801 cacaaggcgg tggacgccat cggcgacctg gcgcttgccg gcgcgccgct catcggcgcc
     4861 tatcattccg tgcgcggcgg ccacaagctc aatcacgccg tgctctcggc gttgatggcc
     4921 gatccttcgg cgtggaccta tgtcgagatg cccgaagtcg tgcgccgtgc gcgcggccac
     4981 gcggaactcg ccgccggttt tgcggcgccg gcttacgggc ccgacgtctc ctgattcgct
     5041 ggcctttttc gccttaatcc gggccgattg tcggcctaat cgcccgtggg tcggcagccg
     5101 ctcccgaaaa aaacgcgcga gcgcgcggca gggagtgggg gcatcggcgg ggcgggattt
     5161 tcatcaccat catgacgctg tggccacggc gaacgcacgg atcgggctca aggctgcgtg
     5221 cgctggccgg cctccttgcg cttgtgctcc ttgccgcgcc gcttctcggc tgcagcttgt
     5281 tcaacaagga cgaggattac gttccggacg atcccgccga caagctctac aatcaggggc
     5341 ttttcctgct caaccagaag caggactacg acgccgcggc gaagaaattc gacgaggtcg
     5401 accggcagaa cccgtattcc gactgggcgc gcaaggcgct gctgatgtcg gcctattcct
     5461 actatcaggc caagaagtac gacgattgca tcaacgcggc gaagcgctac gtgacgctgc
     5521 atcccggcag ccccgatgcc gcctacgcgc aatacctgat cggcgcctcc tattacgacc
     5581 agattcaaga cgtcaatcac gaccaggcgc gggccgacag ggcggtcggc gcgctctcgg
     5641 aggtgatgcg caaatatccg gattcggaat acgcccaaaa tgccaagaag aagatcgaga
     5701 tggcgcgcga ccagctcgcc ggcaaggaaa tggagatcgg ccgcttctac atgaagcggc
     5761 gcgatttcac gggcgccatc aatcgcttca aggtggtggt gacgcaattc cagacgacgc
     5821 gtgaagtcga ggaggcgctg gcgcggctta ccgaagccta tctgtcgcta ggcatcatcg
     5881 acgaggcgca gaccgctgcc gccgtgctcg ggcacaattt cccggagagc ccctggtaca
     5941 aggacgccta caacctcatg aaatccgccg gcgtcgagcc gagcgagaac aaggattcct
     6001 ggatcagccg cgccttcaag aagctcggac tcggatgaca gatgacagat gcggtcggca
     6061 gatgtccgag caggtgatgt cataggacaa tcggagaatc acggatatca tctgacatcc
     6121 gccctctgac atccgacttc cgccgccatg ctcgcccggc tttccatccg cgacatcatc
     6181 ctgatcgacc ggctcgacat tgatttcggc gccggcctgg cggcactgac cggcgagact
     6241 ggcgccggca aatcgatcct gctcgatgcc ttcgcgctcg ccctcggcgc gcgcggggag
     6301 gcggcgctgg tccgtgaagg cgccgtgcag gggcaggtga ccgcggtctt cgagctgggc
     6361 aaggagcatc cggcgcgccg cctgctcgcg gagaacggcc tcgccagcga ggacgagctg
     6421 atcgtgcggc gcgtgcagat cgccgacggg cggacccgcg ccttcgtcaa cgatcagccg
     6481 gtgagcgttc aggtgctgcg cgcgctcggc gcggcgctgg tggaaatcca cgggcagcac
     6541 gacgagcgcg ccttcatcga ggcgggaacg caccgcgcgc tgctcgacgc cttcggcggg
     6601 ctcgaggccg ccgccgccga ggttcggggc ctgtggcagg agcggcgcgc gcgcgaagcc
     6661 gcggtcgcgg cgcatcgcgc cgacgtcgag cgtgccggcc gcgaggcgga atggctccgc
     6721 catgcggtcg aagagctcgg ccgtctcgcg ccggagcggg gcgaggaggc cgcgcttgcg
     6781 gagcggcgcg cggcgatgat gcaggcggaa aaggtggccg aggacctgcg cctgacgcac
     6841 gagagcgtca ccggcccgca gtcgcccgtg ccgccgctcg ccaccgccgt gcgccgactc
     6901 gagcgccgcg cggcgcaggc gccggcgctg atcgagccgg ccgtgaagtc gatcgacgcc
     6961 gcgctcaccg cgctcgacga ggcgcgcgcg cacctcgagc aggcgctgcg cgtcgccgaa
     7021 tacgatccgc gcgaactcga gcgcatggag gagcgcctgt tcgcactgcg tgccgcaggg
     7081 cgcaagtaca acgttccggt cgacgagctc ggcgcgctcg cccgccgcta cgaggccgat
     7141 ctcgctctga ttgacgccgg cgccgagcgg ctcgcaaagc tggagcagga ggcgcgcgag
     7201 gttgcggcgc gctaccggca ggccgcggag gcgctctccg ccgcgcgccg cggcgcggcg
     7261 gtgacgctcg acaaggcggt caatgccgaa ttgaagccgc tcaagctcga acgggcgcaa
     7321 ttctccaccg agatcggcgg cgacggcgaa ggaccggacg gcctcgatcg cgccgagttc
     7381 tgggtgcgca ccaatccggg cacacggccg ggcccgctga tgaaggtcgc ctccggcggc
     7441 gagctggcgc ggtttctgct cgcgctcaag gtcgtgctcg ccgaccgcgg ctcggcgccg
     7501 actctcatct tcgatgagat cgacaccggc gtcggcgggg ccattgccga cgcgatcggt
     7561 gtccgcctcg cccggctcgc ggcgcgcgtg caggtgatcg ccgtcaccca cgccccgcaa
     7621 gtggcggcgc gcgccgaccg gcattatctc atcgccaagg acgcgctggc caagggcagg
     7681 cgggtcgcga cccgcgtcag cgagctcgcc gccgagcgtc gtcgcgagga gatcgcgcgc
     7741 atgctggctg gcgccgagat caccgccgag gcgcgcgccg ccgccgagcg cctgatccgc
     7801 gccgcggggt gactattgtt tgattgaatc gtcatgcccg cgcttgtcgc gggcatccac
     7861 gtcttgagaa aatgccgcgt caaaaacaaa gacgtggatg gccgggacaa gtccggccat
     7921 gacgaactag atatttctac atagactcat tccggccttc agtcgtcccg gaacaacgaa
     7981 catcatggca tccaaggata ccgcgaagct tccggtcgag cccctcaccg aaaagcaggc
     8041 gaaggccgag cacgcgcggc ttgccgaaga gatcgccgcg cacgaccgcc gctactatca
     8101 ggaagacgcg ccgaccgtct ccgacgccga gtacgaccgg ctgcggcagc gctatgccgc
     8161 gatcgaggcg cggttcccgc aattgcgtac gctcgacagc ctgacgcagc gcgtcggcgc
     8221 ggcgccggcg gcgcgctttg ccaaggtccg ccacgcggtg ccgatgctct cgctcgacaa
     8281 cgccttcgcc gacgaggatg tcgtcgactt cgtcggccgc atccggcgct tcctgcgcct
     8341 cggcgaggac gacgagatcg tcttcagcgc cga
//
LOCUS       DATMQB010000471         3276 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4270994, whole genome shotgun sequence.
ACCESSION   DATMQB010000471 DATMQB010000000
VERSION     DATMQB010000471.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3276)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3276)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3276
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4270994"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..254)
                     /locus_tag="VNY79_13680"
     CDS             complement(<1..254)
                     /locus_tag="VNY79_13680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018431440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PHP domain-containing protein"
                     /protein_id="HWX73545.1"
                     /translation="MSGSRYTELQVTTHFSFLRGASSCEELFATAAVMGVEALAVVDR
                     NSLAGVVRAHEAAKTTGVRLVVGCRLDLTEGYSVLVYPTDR"
     gene            complement(251..1778)
                     /locus_tag="VNY79_13685"
                     /pseudo
     CDS             complement(251..1778)
                     /locus_tag="VNY79_13685"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012092589.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase Y family protein"
     gene            complement(1693..2430)
                     /locus_tag="VNY79_13690"
     CDS             complement(1693..2430)
                     /locus_tag="VNY79_13690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019995404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImuA family protein"
                     /protein_id="HWX73546.1"
                     /translation="MVEELRERIRRIEGPSARGRAVLPFGIKEIDRHLPGGGLALGAL
                     HEVAGGGNGAIDGAAAALFAAGIAARTRGKVLWCITRPDLFAPALAQAGLKSDRVIYL
                     EAGEDKSVLACFEEGLRHGGLGAVVAEVARLPMTASRRLHLAAEGSGTIGMALRRWRR
                     QTEASDFGQPTAAVTRWRVSALPSAPLPVAGVGRPRWLVELIRCRAGESADFELEACD
                     DTGRLALPSDLVDGSGQTEGRRRRASG"
BASE COUNT          558 a         1114 c         1098 g          506 t
ORIGIN      
        1 cggtcggtcg gatagacgag gacggaatag ccttcggtaa gatcgagccg gcagccgacc
       61 accaggcgca cgccggtggt cttggccgcc tcatgggcgc gcaccacgcc tgcaagagag
      121 ttgcggtcga ccaccgccag cgcctcgacg cccatcaccg ccgcggtcgc aaacagctct
      181 tcgcaggagc ttgcgccgcg caggaagctg aaatgcgtag tcacctgcag ctcggtgtag
      241 cgcgagccgc tcatccgaag attccatgga taaaccagcg ctgcgacccg gtcagcggat
      301 cctcgccatc gccggcgcgg aacacccagt agcgttcgcc ggcgtcatcc tcgatccgga
      361 aatagtcccg gacggcgatc agctccgggt cgcgcttcca ccattcgccg aacacgcgct
      421 cgggtccatc ggcgcgcttc acgcgccggc gtatgccgcg ccaggtgaac gacactggcg
      481 gatggtccgg aagcagcgcc acggtgtcga tcggctcagg gtgcgcgagc aggcgcgacg
      541 gccgcggcca atggcccggc cactccgctc cagtctccgg cgccatggcc gggatatgct
      601 gaaccgaacg ctccggcaca tcgctcgcca ccggcgcgat ccgatagagc ttctgctcgc
      661 cgacgcggtt ggccaggaga tcgatcaggc cagagacgtc cggctccgct tcctcgacca
      721 gatcggtgac ggcctgcttc gccgccagcg gctcggccac ggcggcggcg agcgtcatca
      781 tctcgatgcc gaagcccggc tcgatggttt cgatcttgtc cgagagcagc cgggtcatgc
      841 gcttagcatc gcggagcgga agcgctgtgc cgacgcgcac cgcctgcgcg cggttgtcta
      901 cccgatggca gatgaggtcg agccggcggg caccgaggcc cttcaattcg agcgcaccgc
      961 acagctggac cgagagcttg gcgatatagc gcgcgatggt ttccgccgcg ccgatcggtt
     1021 cagcgaaagc ctggcggact tcgatcagct ccgcggggcg ggcggatggg ctcgatcggt
     1081 tcgctgaggc ggccgatggc ctggtcgatg cgccttccga gttcgggccc gaagcgcagc
     1141 gcaagcggtg cgcggggctg cgccagcaga tcggcgatgt ggtcaaaccc aaggacgcgc
     1201 agaccgtcga caagatcagc cgagagccgc aacgcggcga tcggcagcgg cgcgatgtcg
     1261 gtcgagcaaa cgccggcctg tgagatgaac atcggccgcg cggcgtagcg cgccagcgca
     1321 tgcgccgtgc cccacgtgtc cgcgaccgca ccgcgcgcgc ggataccgat gccggcgagc
     1381 ttggcgatca gcgtccccag catggccttc tcgccaccat gcagatggtc ggcgcccgtg
     1441 gagtcaataa cgataccgtc cggcaaatcg gccgccacaa tgggcgcgaa gcgctgcagc
     1501 atccaaagcg ccagccgatc gatcgcgtca gcgtcggcgg acggatcggc gtcctgaatg
     1561 gcgagccccg gcacgagaac ctgcgccttg gtggcgggca tgccgacacg aaggccggcg
     1621 gcttgcgccg cagcgtccgc cgccagcacc acccgccgcc ttccttcccg gccgaccagg
     1681 acgaggggcg cctcagccgg aggcgcgccg ccgccggcct tccgtctgac ccgatccgtc
     1741 gacaaggtcg gaaggaagag cgagacgacc cgtgtcatcg cacgcctcca attcgaaatc
     1801 cgcgctttcg ccggcgcggc agcggatgag ttcgacaagc catcggggcc gtccgacacc
     1861 ggcgaccggt aggggagcag aggggagcgc cgagacgcgc cagcgggtga cggcggcggt
     1921 cggctggccg aaatcagacg cttcggtctg gcggcgccag cggcgcagcg ccatgccgat
     1981 cgtgccagag ccttcagccg cgagatgaag ccgccgcgaa gcggtcatcg gcaggcgggc
     2041 gacttccgcg acgacggcgc ctagcccgcc gtggcgtaaa ccctcctcga agcaggcgag
     2101 caccgacttg tcttcgccgg cttcgagata gatgacgcga tcggatttca ggcccgcctg
     2161 ggcgagcgcc ggcgcgaaca ggtcgggccg cgtgatgcac cacaagactt tgccgcgcgt
     2221 ccgggccgca atgccggcag caaacagcgc agcggccgcg ccgtcgatcg cgccattgcc
     2281 gccgccagcg acctcatgca aagcaccaag cgcgagtcca ccccccggca gatgtcggtc
     2341 gatttccttg atgccgaacg gcagcactgc ccgcccgcgc gcgctcgggc cctcgatgcg
     2401 ccgaatgcgc tctcgaagct cctcgacaat cggggtaggg cgggcgcacg catgtccttt
     2461 gcaactcgca ggaaaactag tatgttcctt atttgttccc actgcgaggt gagagtcaat
     2521 gccggttcag ctggctggtt agggtcgtcg ggtctgcggt gctgcccgcg aagacttcta
     2581 ttgccatcgg acagccgtcg cgggcaacag agcttgatgc ttgccgcgat ggccgcgacc
     2641 tgggcatccg tgtgggtccg ggcgtttttc gcatacgggg tcagccgatc gcgatcgccc
     2701 agcgctcgac cttgtccgct ggccagggcc tttgattttc gcccccatct cgcgcgcggg
     2761 cgcgcgcacg cgccgaggga ggggaagtgt tgacgctttt acccgccggc cgacccgctc
     2821 caggccgcgc tccgcctcgc gccattgatt attcctagga ttgatttaat tcaaagcgcc
     2881 cacggctatt caaagcggct gaaatgcgta gtcacctgca gctcggtgta gcgcgagccg
     2941 ctatcctcgt ggaccgagag gcgcgggtta gtactgtagt gaccgtcctc agccgcactc
     3001 gccgccgtgg cgatctcggc ttcgacttcg ccagtggtcg gagcggtctt ccagacgcgc
     3061 gcgcgcctgt gcggctagcg gctgcaccgg cgcaactggc gcagcgatag caggtgtaac
     3121 aggatcgagc tcggcaccgc gaaggccggg accatcacat tcgggtaaat cccggcggtc
     3181 gcgttgggaa tgctcggcat gatcacttgc atcggaccgg gagcaatcat cagcccgatc
     3241 gaagtccttt gcaactcgca ggaaaactag tatgtt
//
LOCUS       DATMQB010000472         9576 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2136133, whole genome shotgun sequence.
ACCESSION   DATMQB010000472 DATMQB010000000
VERSION     DATMQB010000472.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9576)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9576)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9576
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2136133"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1121)
                     /locus_tag="VNY79_13695"
     CDS             complement(<1..1121)
                     /locus_tag="VNY79_13695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HWX73547.1"
                     /translation="MVRPPGEGEPPSAPSPRTLRGLDWFIFFVADVQTGFGPFVAVYL
                     TTQKWTQGDIGLVLSAAGFVSLIAQMPGGALVDAAKSERLVAGIAVALICLSALAYAV
                     YPIFPVVLSAAVGHAAASCVLGPAIAAISLGLVGHGAISDRLGRNARFASAGNALAAG
                     AMGACGSLLSARAVFIVTVLLLVPALLALRMISAGEIDPERAHGNAPRRPPKPPIRPG
                     ALMQNRPLLIFAGCILLFHLANSAMLPLMAGVLTMRSSGWAPLLIAACIVAPQFIVAA
                     VSPWIGTRARLWGRRPLLLIGFAALPIRGLLFATVTNPSLIVVVQVLDGVTAAVFAVM
                     VPLIIADLTRGTGHFNLGQGIIGTSTGLGASLSASLAGHV"
     gene            complement(1221..1670)
                     /locus_tag="VNY79_13700"
     CDS             complement(1221..1670)
                     /locus_tag="VNY79_13700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009027202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042314 - bacteriochlorophyll binding
                     [Evidence IEA];
                     GO_process: GO:0019684 - photosynthesis, light reaction
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PRC-barrel domain-containing protein"
                     /protein_id="HWX73548.1"
                     /translation="MAAAALLALGVAVTTVFAGNGSVADKTEQATPPAPTPEVTILNK
                     HEVEGILGREVRSAADENMGRIVDVLVDRAGQVRAAIIDFGGFLGVGSRKIAVDWGAL
                     HFPPPGKPGARIALDLNRDQVNAAPEYQEGKPVVVLGALGKLEPLPE"
     gene            complement(1837..4023)
                     /locus_tag="VNY79_13705"
     CDS             complement(1837..4023)
                     /locus_tag="VNY79_13705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011662627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amylo-alpha-1,6-glucosidase"
                     /protein_id="HWX73549.1"
                     /translation="MPPKTAAKTMPAEVPSEGPFYITAQAASRPPRVLKYGDSFVVLD
                     GRGDIAAASGRSAGLFHQDTRYLSRLELLVNGIQPLLLGSNLRDDNSAFFVDLTNPDF
                     LAGQHLILEKDTVHILRAIFLWRDTAYQRFGVRNYGDRPVDLQLSILFENDFADLFEV
                     RGAHRERRGTATAKVRSDDQVLLIYHGLDNRVRHTTVNFDPPPNRLATNAATYDLRLA
                     PKETRPLFVAVSCDRTDSRPPPFLRGRLAARRELRAATRNQTSVETSNDRFNEVLCRS
                     AADLTMLMTDTPQGRYPYAGIPWFSTTFGRDGLITALQMLWWSPDVARGVLRRLAAYQ
                     AKTTDPFADAQPGKILHEMRGGEMAALREVPFGLYYGSVDSTPLFVLLAGLYAKRTGD
                     MDTTAELWPAIEAALGWIDGPGDPDGDGFVEYERATAQGLANQGWKDSHDAIFHADGR
                     LAEGAIALAEVQGYVYAAKRMAAVLARRLGRDGDAARLDAEADRLRDRFESAFWCPEI
                     ETYALALDGQKQPCRVRTSNAGQVLFTGIASPDRAHLVAKGLLQPYFFSGWGIRTVAT
                     GEARYNPMSYHNGSIWPHDNALIALGLARYGHKQSVESLFDGLFGAANYMDYRRLPEL
                     FCGFPKKHGHGPTLYPVACSPQAWASATPFTLLEASLGLEFDPGGGEIHLCNPRLPPF
                     LDEVTLRNLQLGASSVDLRVRRHNGTLSLDTPRISSGIRVSVVYSS"
     gene            4365..5639
                     /gene="oxlT"
                     /locus_tag="VNY79_13710"
     CDS             4365..5639
                     /gene="oxlT"
                     /locus_tag="VNY79_13710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012495476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0015297 - antiporter activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxalate/formate MFS antiporter"
                     /protein_id="HWX73550.1"
                     /translation="MTIEPAAMAADTRRPQQLARWGQLAAGILCMVMIANLQYGWTLF
                     VGPIDRKYQWGTAAIQVAFSIFIATETWLVPVEGWFVDRYGPRIVVACGGILVAGAWA
                     LDSVASSLAVLYLAAALSGVGAGAVYGTCVGNALKWFPDRRGLAAGLTAGGFGAGAAA
                     TVLPIRDMIVSYGYEATFLWFGLGQGLVVLVLAQLLRAPKPGQTPKAAARLTQSLRDY
                     LPLEMLRAPVFWLLYLMFVMVSASGLMATAQIAPIAADFKLADRDVTILFFTATTLSA
                     ALVIDNVCNGLARPFFGWVSDIIGRENTMALVFSLGALAYWGLGALGHTPYLFVLMAA
                     LIFFTWGEIFSLFPATCTDTFGVKYATTNAGLLYTAKGTSVWLVPLASLLREYTGGWH
                     AVFAIAAIMNLAVAALALFVLKPLRRRSLSQK"
     gene            5826..6563
                     /locus_tag="VNY79_13715"
     CDS             5826..6563
                     /locus_tag="VNY79_13715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020092012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003700 - DNA-binding transcription factor
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HWX73551.1"
                     /translation="MPASADIVRNKRPERAEPPTLVAVDPLANAASLKRQAYTALKNA
                     IAAMDVYRSRAEIRLDERRLAHDFGISRTPVREAMAQLEREGFVRSEPRRGVYVVRKS
                     KREVIELITAWAALESMAARLITEHAGDREIASLRHMFATFDDGAVRAHLDEYSQLNI
                     EFHQTIIRMSGNAALINLAENLFTNMRMIRRKTIGEKDRADRSIRDHMSIIEALEARD
                     TLRAETLVRDHALGLAEHVAKYADYLD"
     gene            6695..8431
                     /gene="oxc"
                     /locus_tag="VNY79_13720"
     CDS             6695..8431
                     /gene="oxc"
                     /locus_tag="VNY79_13720"
                     /EC_number="4.1.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006021820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000287 - magnesium ion binding [Evidence
                     IEA];
                     GO_function: GO:0008949 - oxalyl-CoA decarboxylase
                     activity [Evidence IEA];
                     GO_process: GO:0009636 - response to toxic substance
                     [Evidence IEA];
                     GO_process: GO:0033611 - oxalate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="oxalyl-CoA decarboxylase"
                     /protein_id="HWX73552.1"
                     /translation="MAEAAVQAKPAAETERELTDGFHLVIDALKLNGLNTIYGVPGIP
                     ITDFGRMAQAAGIRVLSFRHEQNAGYAASIAGFLTKKPGICLTVSAPGFLNGLTALAH
                     ATTNCFPMILISGSSEREIVDLQQGDYEEMDQLAIAKPLCKAAFRVLHAADIGIAIAR
                     AIRAAVSGRPGGVYLDLPAKLFGQVMDAEAGRRSLVKVVDPAPAQLPAPEAVKRALDV
                     LRSAKRPLIILGKGAAYAQADDAIRSFVERSGIPFLPMSMAKGLLPDAHPQCAGAARS
                     TVLKDSDVVMLIGARLNWLLSHGKGKTWGEPHTKKFIQVDIEPKEMDSNVEIVAPVVG
                     DIGSCISAVLGAIGGDWPAPPADWIKAVTSKREENVAKMAPRLMNNNTPMDYYGALGV
                     LRTIVKERPDAILVNEGANTLDLARGVIDMYQPRKRIDVGTWGVMGIGMGYAIGAAIE
                     TGKPVLAIEGDSAFGFSGMEVETICRYKLPVCVVVFNNGGIYRGTDVNTAGSDPATTV
                     FVKGSRYDKMIEAFDGIGVNATSPDELKRAVNEAMDSGNPTLVNAVIDPSAGSESGRI
                     GNLNPQSALRKK"
     gene            8627..>9576
                     /gene="frc"
                     /locus_tag="VNY79_13725"
     CDS             8627..>9576
                     /gene="frc"
                     /locus_tag="VNY79_13725"
                     /EC_number="2.8.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018387630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA];
                     GO_function: GO:0033608 - formyl-CoA transferase activity
                     [Evidence IEA];
                     GO_process: GO:0009636 - response to toxic substance
                     [Evidence IEA];
                     GO_process: GO:0033611 - oxalate catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="formyl-CoA transferase"
                     /protein_id="HWX73553.1"
                     /translation="MKKPAIKTPARRNAPPRPSSKPWGEAGRALDGVRILDFTHVQSG
                     PTCTQLLAYMGADVIKVERPGIGDVTRGQLRDVKDADSLYFTMLNGSKRSITIDSKHP
                     KGREVLDRLVKACDVLVENFAPGALDRMGLTWEHIHKVNPRMIVASVKGFGPGPYEDC
                     KVYENVAQCAGGSASTTGFRDGPPLVTGAQIGDSGTGLHLALGIVAALYQRNRTGRGQ
                     KVLCAMQDGVLNLARVKLRDQQRLGHGPLAEYSQYGEGVPFGRATPRAGNDSGGGQPG
                     WILKCKGWESDPDAYVYFITQAPVWGAICDLIGKPEWKSDP"
BASE COUNT         1753 a         3097 c         3163 g         1563 t
ORIGIN      
        1 acatggccgg ccagcgaggc gctcagcgac gcgcctagcc cggtcgatgt gccgataatc
       61 ccctgcccaa gattgaagtg tccggttccg cgcgtgagat cggcaatgat cagcggcacc
      121 atgacggcga acaccgccgc cgttacgccg tcaaggacct gcaccacgac gatcaaggac
      181 ggattggtca cggtagcaaa cagaaggccg cggatcggca gggcggcgaa gccgatgagc
      241 agcagcggcc gtcgtcccca aagccgcgcc cgcgttccga tccagggcga cacggcggcg
      301 acgataaact gcggcgcgac gatgcaggca gcgatcagga gcggcgccca cccgctcgat
      361 cgcatggtaa gcacgccggc catcaacggc agcatggcgg aattggcaag atgaaacagc
      421 agaatacagc cggcgaagat gagcaacggc cggttttgca tcagcgcgcc cggccgtatc
      481 ggcggtttcg gcgggcgtcg cggcgcgttg ccgtgggcgc gctccggatc gatctctccc
      541 gccgatatca tgcgcagcgc cagcaaagcg gggacgagga gaagcacggt aacgatgaag
      601 accgcccggg cggacaagag agagccgcac gcgcccatcg cgcctgccgc gagcgcgttg
      661 ccggcggagg cgaagcgggc gttgcgccca agccggtcgc tgatggcccc gtgcccgaca
      721 aggccgaggc tgatcgcggc aatcgccggg ccgagcacgc agcttgcggc cgcatgtccg
      781 acggcggcgg aaagcacgac cggaaaaatc ggatagacgg cataggcgag cgcgctcagg
      841 caaatcaagg cgacggcaat gccggcgacg agccgttccg acttggctgc atccaccaac
      901 gctccgcccg gcatttgcgc gatcagcgag acgaatccgg ccgcggagag aacaagaccg
      961 atatcgccct gggtccattt ctgtgtcgtc agataaaccg cgacgaacgg cccgaaaccc
     1021 gtttgcacgt cggcgacgaa gaagatgaac caatcgagcc cgcgcagggt tcgcggggag
     1081 ggcgcggatg gcggttcgcc ttctcccggc ggccggacca gcggcggcgg gggttcatcc
     1141 gcggccgctc gctcgtcacc gggcctgtcg ttaaagcggc gtgatggttc cgcggccagg
     1201 ttacccctcc acccctggtg tcattcgggc agcggctcaa gcttgccgag ggcgcccaga
     1261 acgaccacgg gcttgccttc ctggtattcc ggcgcagcgt tcacctggtc gcggttgaga
     1321 tcgagcgcga tccgggcgcc cggcttgccg ggcggcggga aatgcagcgc gccccagtcg
     1381 accgcgatct tgcggctgcc gacgccgagg aagccgccga agtcgatgat ggcggcgcgc
     1441 acttgtccgg cgcgatcgac gagcacgtcc acgattcggc ccatattctc gtcggcggcg
     1501 ctgcgcacct cgcggccgag gatgccttcg acctcatgct tgttgagaat ggtgacttcg
     1561 ggggtggggg caggcggggt tgcctgttcc gtcttgtcgg ccaccgagcc gttgccggcg
     1621 aacaccgtcg tgacggcgac acccagcgcg agaagcgcgg ctgccgccat cactgtccgc
     1681 tgatccccgc gcatgccgcc tccagcgatg tatctgaggg ccacacccaa caagccaggg
     1741 aactggcgct ggttccatgc ggcgcgtgac cccgcacagc cgcgcgggga gcccccggcg
     1801 gcctccgcgc ggtccccgga gcgccgggcc ggcgcctcac gaagaataga cgacggaaac
     1861 tcgaatcccg ctgctgatcc gcggcgtgtc gagcgacaac gtgccgttgt gacgccgcac
     1921 cctcaaatcg acgctcgatg ctccaagttg caggttgcgc aacgtcacct cgtcgaggaa
     1981 tggcggcagg cgtggattgc acaaatggat ctcgccccct cctgggtcga attccaggcc
     2041 gagcgaagct tcaagcaggg tgaaaggcgt agcgctcgcc caggcttgcg gcgagcaggc
     2101 aacgggatag agggtcggcc cgtggccgtg cttcttcgga aaaccgcaga acagctcagg
     2161 cagccggcgg tagtccatgt agttcgcggc gccgaacagt ccgtcgaaca agctctcgac
     2221 ggactgtttg tgtccgtagc gcgcgagccc gagcgcaatc agcgcattgt cgtgtggcca
     2281 gatcgagcca ttgtggtacg acatggggtt gtagcgtgcc tcacccgtag ccacggtgcg
     2341 gatgccccag ccggagaaga agtacggctg cagcagcccc ttggcgacga gatgcgcccg
     2401 atcggggctg gcgatgccgg tgaacagaac ctggccggca ttggaggtac ggacgcggca
     2461 aggctgtttc tggccatcaa gcgcaagcgc gtaggtttcg atttccgggc accagaacgc
     2521 gctctcgaag cggtcgcgca ggcggtctgc ttcggcatca agcctcgcag catcgccgtc
     2581 gcgcccgagc cgccgcgcca gtacggcggc catgcgcttg gcggcgtaga cgtaaccttg
     2641 cacctcggcg agcgcgatcg cgccttccgc caatctgccg tcggcatgga aaatggcgtc
     2701 atgcgaatcc ttccagcctt ggttggcgag accctgggcg gtcgcgcgtt cgtattcgac
     2761 gaagccgtcg ccgtcggggt cgcccgggcc atcgatccag ccgagcgccg cctcgatcgc
     2821 cggccacaat tcggcggtgg tatccatatc gccagtgcgt ttcgcgtaga gccccgcgag
     2881 caggacgaac aacggagtcg agtcgacgct gccgtaatat aggccgaagg ggacctcgcg
     2941 gagcgccgcc atctcgccgc cgcgcatctc gtgcaggatc tttcccggct gcgcatcggc
     3001 aaaaggatcc gtggtcttgg cctggtaggc ggcgaggcgc cgcaacacgc cacgggcaac
     3061 gtccggactc caccagagca tctgcagcgc cgtgatcaga ccgtcacggc cgaaggtcgt
     3121 cgagaaccac gggatgccag cgtagggata gcggccttgc ggcgtatccg tcatgagcat
     3181 ggtgaggtcg gctgcggatc ggcatagcac ctcgttgaaa cggtcgttcg aagtttcgac
     3241 cgaggtctgg ttccgggtgg ccgcgcgcaa ctcgcgccgg gcagcaaggc ggccacgcag
     3301 aaacggcggc gggcgcgaat cggtgcgatc gcagctcacc gccacgaaca gcggccgcgt
     3361 ctctttgggg gcgaggcgga gatcgtaggt ggcggcgttg gtcgcgagtc ggttcggcgg
     3421 cggatcgaag ttcacggtgg tgtggcgtac tctgttgtcc agtccgtgat agatcagcag
     3481 gacctgatca tcgctccgga ccttagcggt cgcggtgccg cggcgttcgc ggtgcgcccc
     3541 gcggacttcg aacaggtcgg caaagtcgtt ctcgaacagg atcgacagct gcagatcgac
     3601 cgggcgatcg ccgtaattgc gcacgccgaa ccgctgatag gccgtatcgc gccacaggaa
     3661 gatcgcgcgc agaatgtgaa cagtgtcctt ttccaggatg aggtgctggc cggcgaggaa
     3721 atcgggattg gtcagatcga cgaagaacgc cgaattgtcg tcgcgcagat tggagccaag
     3781 cagtagcggc tggatcccgt tgaccagcag ttcgaggcgg gagagatagc gcgtgtcttg
     3841 atggaacagg ccggcggagc ggcccgaggc ggccgcgata tcgccgcggc catcgaggac
     3901 cacgaagctg tcgccatact tgagcacgcg gggaggccga ctggcggcct gcgctgtgat
     3961 gtagaacgga ccttccgagg gcacctcggc gggcattgtc ttggcggcgg tctttggagg
     4021 catcgtgcag tcgctcgggc tgtcgggttc agtgatccgg gtggcgcggc cgattattag
     4081 agcggcggct gagtcgtgtc agccccgccc aagaggccaa agattacgcg gccgacaaaa
     4141 cggcgaacac aactgtggaa ataagcgcgt ttgtggagaa tgttgcagcg caattgccgc
     4201 atgccggttc gctgccgagc gcatgattcc gttctccctc tctcgcgcgt cggcgcgaca
     4261 atagaccaca agcagcgcca gcgtccgccg gaaccgtttg acgatgcaaa cgccgccgcg
     4321 ctcaagagtt ccgggatcga tgaaaatatt tcggggcgag gcccatgacg attgaaccgg
     4381 cggccatggc ggcggacacc cgccgcccgc agcagctagc ccgctggggg cagctcgcag
     4441 cgggaatcct gtgcatggtg atgatcgcca acctccaata cggctggacg ctgttcgtcg
     4501 gtccgatcga ccggaagtat caatggggca cggccgccat tcaggtcgcg ttcagcatct
     4561 tcatcgcgac cgagacttgg ctcgtgccgg tcgaaggctg gttcgtcgat cgctacggcc
     4621 cccgcatcgt cgtcgcctgc ggcggcattc ttgttgctgg cgcctgggcg ctcgattcgg
     4681 tggcgagttc gctcgcggtg ctctatctcg ccgcggcgct gtccggtgtc ggtgcgggcg
     4741 cggtctacgg cacctgcgtc ggcaatgcgc tcaaatggtt tcccgatcgc cgtggtctcg
     4801 ccgccggact caccgccggc ggcttcggcg ccggcgccgc cgcgaccgtc ctgcccatcc
     4861 gcgacatgat cgtctcttac ggctatgaag cgaccttcct ctggttcggg ctggggcagg
     4921 ggctggtggt cctcgttctc gcgcagctcc tgcgcgcacc gaaacccggc caaaccccga
     4981 aagccgcggc gcggctgacg caatcgctgc gcgactatct gccgctcgag atgttgagag
     5041 cgccggtctt ctggctcctc tatctcatgt tcgtcatggt ctcggcgtcg ggcctgatgg
     5101 caacggcgca gatcgcgccc atcgccgcgg atttcaagct cgccgaccgc gacgtgacca
     5161 ttctgttctt caccgccacc actctgagcg cggcgctggt catcgacaac gtctgcaacg
     5221 gtctggcgcg gccgttcttc ggctgggtgt ccgacatcat cggccgtgag aacacgatgg
     5281 cgctggtatt ctcgctgggc gcgctggcct attggggcct cggcgcgctg gggcacacgc
     5341 catatttgtt cgtgctcatg gccgcgctca tcttcttcac ctggggggaa atcttcagct
     5401 tgttcccggc gacctgcact gacaccttcg gggtgaaata cgcgaccacc aatgccggcc
     5461 tcctctacac cgcgaaaggc acctcggtct ggctcgtacc gctggcgagc ctgctgcgcg
     5521 aatacaccgg cggctggcac gcggtgttcg ccatcgccgc gatcatgaat ctggctgtcg
     5581 ccgcgcttgc gctgttcgtc ctcaagccgc tgcggcgacg ctcgctcagc cagaaatagt
     5641 cacgagggcg ggtggccggg ccgatcccac ggcctcgcca ccacctgtgg ccccttgggc
     5701 cgaaaccatc gtccggccat cgccgccgca gggatcgcat cgccgtttga cttgcccgag
     5761 actggaataa tgtataccag caacgagaac agggtttgtc gggcagtaag tgcgagcgcc
     5821 tattgatgcc tgcaagcgcc gatattgtga gaaacaagcg ccccgagcgg gccgagccgc
     5881 caaccctggt ggccgtcgat ccgctcgcca atgccgcaag cctgaaacga caggcttata
     5941 cggcgctcaa gaacgccatc gccgcgatgg atgtctatcg cagccgcgcc gagatcaggc
     6001 tcgacgagcg gcgcctggcg cacgacttcg gcatcagccg cacgccggtg cgtgaagcta
     6061 tggcgcaact cgagcgcgaa ggtttcgtgc gctccgagcc gcgtcgcggc gtctatgtgg
     6121 tgcgcaagag caagcgcgaa gtcatcgagc tgatcaccgc atgggcggca ctcgaaagca
     6181 tggcggcgcg gctcataacc gagcacgccg gcgaccggga gattgcgtcg ctgcggcaca
     6241 tgtttgcgac gttcgatgac ggcgcggtgc gcgcgcatct cgacgaatac tcgcaactca
     6301 atatcgaatt ccatcagacg atcatccgca tgagcggcaa cgctgcgctg atcaatctcg
     6361 ccgagaacct gttcaccaat atgcgcatga tccggcgcaa gaccatcggc gagaaggatc
     6421 gcgccgaccg ctcgatccgc gatcacatgt ccatcatcga agccttggaa gcccgagaca
     6481 cgcttcgtgc cgaaacgctg gtgcgcgatc atgcgctcgg tctcgccgag catgtggcga
     6541 aatatgccga ctatctggat tgaacagaac atctcccgtc acccagaggt gcgagtgaaa
     6601 cgagcctcga agggtggcgg cccggccgtg cattctccga ggtccgcctg cggtgggaca
     6661 catcggagtg acggaaaaca ccagggaggc gccaatggct gaggcagcag tgcaagcgaa
     6721 acccgcggcc gaaaccgagc gtgagctcac ggacggcttt cacctcgtca tcgatgcgct
     6781 caagctcaac ggcctcaaca cgatctacgg cgtgcccggc atcccgatca cggatttcgg
     6841 ccgcatggcg caggccgccg gcatccgcgt gctatcgttc cggcacgagc agaacgccgg
     6901 ctacgccgcc tcgatcgccg gtttcctgac caaaaagccc ggcatctgcc tcacagtatc
     6961 ggcgcccggc ttcctcaacg gcctcacggc gctcgcccac gccacgacca attgcttccc
     7021 gatgattttg atttcgggct cgtccgagcg cgagatcgtg gatttgcagc agggcgacta
     7081 cgaggagatg gaccagcttg ccatcgccaa gccgctctgc aaggccgcgt ttcgcgtgct
     7141 gcacgcggcc gatatcggca tcgccatagc gcgcgcgatc cgcgccgcgg tgtccggtcg
     7201 ccctggcggt gtctatctcg atctgccggc caagctgttc ggtcaggtga tggacgcgga
     7261 ggctgggcgc aggtcgctgg tcaaggttgt cgatccggcg ccggcgcagc ttcccgcgcc
     7321 tgaggcggtg aagcgcgcgc tcgatgtcct cagaagcgcc aagcgtcccc tcatcattct
     7381 cggcaaaggc gcggcctacg cccaggccga cgatgcgatc cgctcgttcg tcgaaaggag
     7441 cggcatcccc ttcctgccga tgagcatggc caagggtctg ttgcccgacg cccatccgca
     7501 atgtgcgggg gctgcccgct cgaccgtttt gaaggactcc gacgtggtga tgctgatcgg
     7561 cgcccgcctc aactggctcc tgtcgcacgg caagggcaag acctggggcg agccgcatac
     7621 caagaaattc atccaggttg atatcgagcc gaaggagatg gattccaacg tcgagatcgt
     7681 cgctccggtg gtcggcgata tcggctcctg catcagcgcg gtgctcggcg ccatcggcgg
     7741 cgactggccg gccccgccag ccgactggat caaggcggtg acttcgaagc gcgaagagaa
     7801 cgtcgccaag atggcgccgc ggttgatgaa caacaacacg ccgatggact attacggcgc
     7861 gctcggcgtc ctgcgcacca tcgtcaagga gcggcccgac gccatcctcg tcaacgaagg
     7921 cgccaatacg ctcgatctcg cgcgcggcgt gatcgacatg tatcagccgc gcaagcgtat
     7981 cgacgtcggc acctggggcg tcatgggcat cggcatgggc tacgccatcg gcgccgccat
     8041 cgaaaccggc aagcccgtgc tcgccatcga gggcgactcg gccttcggtt tctccggcat
     8101 ggaagtggaa acaatctgcc gctacaagct gccggtctgc gtcgtcgtct tcaacaacgg
     8161 cggcatctat cgcggtaccg acgtcaacac tgccggctcg gatccggcga cgacggtgtt
     8221 cgtcaagggt tcgcgctacg acaagatgat cgaggcattc gacggcatcg gcgtcaatgc
     8281 gacgtcgccc gatgaactca agcgtgccgt gaacgaggcg atggactccg gcaacccaac
     8341 ccttgtcaat gcggtgatcg acccgtcggc cggcagcgag agcggacgca tcggcaatct
     8401 caacccccaa agcgccctgc gcaagaaata gggacgatga acaagccgtt cgtccccgcg
     8461 aaagcggaga cgcggcgcaa gacgcgatga gacgaagcat ttgatgcccg cttcacgggc
     8521 atgaacggag tgcacggagc gaagcatggt aacgcggaag aaggcgaagc gagcaaaatc
     8581 caaggcggcg gctaacaaat ccgccaggaa agttgcaaga ctgaatatga agaagcccgc
     8641 gatcaaaacg cccgcccgcc gcaacgcgcc gccacgcccg agcagcaaac cgtggggaga
     8701 agcgggcagg gcgctcgatg gcgtgagaat cctcgatttc acccacgtgc agtcgggacc
     8761 gacctgcacg cagcttctcg cctatatggg cgccgacgtg atcaaggtgg aacggcccgg
     8821 catcggcgac gtgacgcgcg gccagcttcg cgacgtgaag gacgccgaca gcctgtattt
     8881 caccatgctc aacggcagca agcgctcgat caccatcgat tccaaacatc ccaaaggccg
     8941 cgaggtcctc gatcggttgg tgaaggcctg cgacgtactg gtggagaatt tcgctcccgg
     9001 cgcgctcgac cgcatgggcc tcacctggga gcacattcac aaggtcaacc cgcgcatgat
     9061 tgtcgcctcg gtgaagggtt ttgggcccgg tccctacgag gactgcaagg tttatgagaa
     9121 cgtggcgcaa tgcgcgggcg gctcggcctc gaccaccggc tttcgcgacg gtccgccgct
     9181 cgtcaccggc gcgcagatcg gcgactccgg gaccggcttg catctcgcgc tcggcattgt
     9241 cgccgcgctc taccagcgca accgcaccgg ccgcgggcag aaggtgctgt gcgccatgca
     9301 ggacggcgtg cttaacctcg cgcgggtaaa gctccgcgac cagcagcggc tcgggcacgg
     9361 cccgctcgcc gagtacagcc agtacggcga gggcgttccg ttcggtcggg caacgccgcg
     9421 cgccggcaac gattccggcg gcggtcagcc gggctggatc ctcaaatgca aggggtggga
     9481 gagcgacccc gacgcctacg tctatttcat cacccaggcg ccggtgtggg gcgcgatctg
     9541 cgacctcatc ggcaagccgg aatggaagag cgatcc
//
LOCUS       DATMQB010000473         2531 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_255964, whole genome shotgun sequence.
ACCESSION   DATMQB010000473 DATMQB010000000
VERSION     DATMQB010000473.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2531)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2531)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2531
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_255964"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..198)
                     /locus_tag="VNY79_13730"
     CDS             complement(<1..198)
                     /locus_tag="VNY79_13730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018045198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HWX73554.1"
                     /translation="MLRIDNLVFDAWGRRFFDAASVAIPAGTKVGVVGRNGVGKSTLF
                     RLILGDLVPLGGEILLPKNATI"
     gene            complement(326..>2531)
                     /gene="dnaE"
                     /locus_tag="VNY79_13735"
     CDS             complement(326..>2531)
                     /gene="dnaE"
                     /locus_tag="VNY79_13735"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006020742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009360 - DNA polymerase III complex
                     [Evidence IEA];
                     GO_function: GO:0003887 - DNA-directed DNA polymerase
                     activity [Evidence IEA];
                     GO_process: GO:0006260 - DNA replication [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HWX73555.1"
                     /translation="EVIRYVQEKYGRDQVAQIITFGTLQARGVLRDVGRVLQMPYGQV
                     DKLCKLVPQNALDPVSLGRAIEGEPRLQAARDSDPVVRRAFDIAQKLEGLTRHASTHA
                     AGIVIGDRPLTELVPLYRDPKSLMPVTQFNMKWVEPAGLVKFDFLGLTTLTVLDLTAK
                     MVRRRGVEIDLSNLPLDDAKSYDLMARGETVGVFQVESSGMRRALIDMRPDRFEDIVA
                     LVALYRPGPMANIPTYCARKHGLEQPDYFHPKLEPILRETYGVIVYQEQVMQAAQVLS
                     GYSLGEADLLRRAMGKKIRSEMQAQRNRFVSGAVERGVEQAQAAAIFELLERFADYGF
                     NKSHAAAYALVAYQTAYMKANYPVEFLAASMTLSMGNTDKLAEFRAEAERLAIKVESP
                     SINRSGVEFEVAGNTIHYALAALRGVGRQAVEAIVAARGEEPFADLADFARRINPRAV
                     NKRVVESLAAAGAFDGMEANRARVFAAVDAMLATAQRAHEDAALGQSELFGGPAAREP
                     IVLVALEPWLPAERLQREYDAVGFFLSGHPLDDYAAALKRLRVQPWAEFARAVKGGAG
                     AGRVAGTVVARTERRTKNGTKMGIIGLSDPSGQYEAVLFAEGLAQYRDLLEPGSAVLL
                     FLTAEVQGDEVRARIQSVEPLDEAAAKMHKGLRVFLRNQAPIEGVARRLEPMPSRSGR
                     NGADHGDGEVSMVLMLENGNEVEVKLPGRFKVSPQIAGAIKAVSGVVTVEAV"
BASE COUNT          418 a          859 c          831 g          423 t
ORIGIN      
        1 gatcgtggcg tttttcggca gcaggatttc accgcccagc ggcacaaggt cgccgaggat
       61 cagccggaac agggtcgatt tcccgacccc gttgcgtccc accacaccga ctttcgttcc
      121 cgccggtatg gcgacactgg cagcgtcgaa aaatcgccgg ccccaggcgt caaagacaag
      181 attgtcgatc cgaagcatat cgcggccgct caagtcggac tgtcgggaag gcgaagggcc
      241 ggttgtttaa cgcgcgacgc ctgagatggc gagagtgatg tagtcggtgt cgtcacgatt
      301 gcgaggatcg caacgactac gccgattaaa ccgcttccac cgtcaccacg ccggagacgg
      361 ccttaatggc gccggcgatc tgcggggaca ccttgaagcg gcccggcagc ttcacctcga
      421 cctcgttgcc gttctcgagc atcaagacca tgctcacttc gccgtcgccg tggtccgccc
      481 cgttgcgtcc ggaccggctc ggcatcggct cgagccgccg cgccacgccc tcgatcgggg
      541 cctgattgcg caagaacacg cgcaatccct tatgcatctt cgccgccgcc tcatcgaggg
      601 gctcgaccga ctggatgcgg gcgcgcactt cgtcgccctg cacctcggcg gtgaggaaga
      661 gcagcaccgc gcttcccggc tcgagcagat cgcggtattg cgccaggcct tccgcgaaca
      721 gcaccgcctc atattggccg ctcggatcgg agaggccgat aatgcccatc ttggtaccgt
      781 tcttggtccg ccgctcggtg cgcgccacga ccgtgccggc gacgcggccg gcgccggcgc
      841 cgcccttcac ggcgcgcgcg aactcggccc agggctgcac gcgcagccgc ttgagcgcgg
      901 cggcatagtc gtcgagcgga tggccgctga ggaagaagcc gaccgcatcg tattcgcgct
      961 gcaagcgctc ggccggcagc cacggctcga gcgccaccag aacgatcggc tcgcgcgccg
     1021 ccgggccgcc gaacagttcc gattggccga gcgcggcatc ctcgtgcgcg cgctgcgcgg
     1081 tggcgagcat ggcatcgacg gcggcgaaaa cgcgcgcccg gttcgcttcc atgccgtcga
     1141 aggcgccggc ggcagccagg ctttcgacca cccgcttgtt gacggcgcgc gggttgatgc
     1201 ggcgcgcgaa gtcggcaagg tcggcgaaag gctcttcgcc gcgcgcggca acgatcgcct
     1261 cgaccgcctg ccggccgacg ccgcgcagcg ccgccagggc atagtggatg gtgttgccgg
     1321 caacctcgaa ctcgacgccg gaacggttga tcgagggaga ctcgaccttg atcgccagcc
     1381 gctccgcctc ggcgcggaat tccgcgagct tgtcggtgtt gcccatgctg agcgtcattg
     1441 acgcggcgag gaattcgacg gggtagttcg ccttcatgta cgccgtctga taggcgacca
     1501 gcgcgtaggc tgcggcgtgg ctcttgttga agccgtagtc ggcaaaccgc tccaacagct
     1561 cgaagatcgc ggccgcttga gcctgttcga cgccgcgctc gaccgcgccg gacacgaagc
     1621 ggttgcgctg cgcctgcatc tcgctgcgga tcttcttgcc catggcgcgg cgcagcaggt
     1681 cggcctcgcc gagcgaatag cccgacagca cctgcgccgc ctgcatcacc tgctcctggt
     1741 agacgatcac gccatacgtc tcgcgcagga tcggctcgag tttcgggtga aaatagtccg
     1801 gttgctccag cccgtgcttg cgcgcgcagt aggtcggaat gttcgccatc ggccccggcc
     1861 gatagagagc gacgagcgca acgatgtcct caaagcggtc cggccgcatg tcgatgagcg
     1921 cgcggcgcat ccccgaactt tccacctgaa acacgccgac ggtttcgccc cgcgccatga
     1981 ggtcgtagga cttggcgtca tcgagcggca gattggagag gtcgatctcg acgccgcgcc
     2041 gccgcaccat tttggcggta agatcgagca cggtcagcgt ggtcaggccg agaaaatcga
     2101 actttacgag ccccgccggc tcgacccatt tcatgttgaa ttgcgtaacc ggcatcagcg
     2161 atttcggatc gcggtagagc ggcaccagct cagtcagcgg ccggtcgccg atgacgatgc
     2221 cggcggcgtg ggtcgaggca tggcgggtga ggccttcgag cttttgcgca atatcgaagg
     2281 cgcgccgcac caccggatcg ctgtcgcgcg ccgcctgcag gcgcggttcg ccctcaatcg
     2341 cgcggccgag cgagaccgga tcgagcgcgt tctgcggcac gagcttgcaa agcttgtcga
     2401 cctgcccata gggcatctgc aacacgcgtc cgacgtcgcg cagcacgccg cgcgcctgca
     2461 gcgtgccgaa ggtgatgatc tgcgcgacct ggtcgcggcc gtatttttcc tgcacgtagc
     2521 ggatcacctc g
//
LOCUS       DATMQB010000474         4794 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1528853, whole genome shotgun sequence.
ACCESSION   DATMQB010000474 DATMQB010000000
VERSION     DATMQB010000474.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4794)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4794)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4794
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1528853"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1684)
                     /locus_tag="VNY79_13740"
     CDS             complement(<1..1684)
                     /locus_tag="VNY79_13740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009763407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HWX73556.1"
                     /translation="MDARSSRYHEVYARWQRDPQGFWAEAAAAIDWFEKPKTVFDAAA
                     GIYGRWFVGGVCNTCFNAVDRHVNAGRGEQAAIIYDSPLAGVKRTITYHRLMTETQVL
                     AAMLRDLGVGKGDRVILYMPMVPEAAIGMLACARIGAIHSVVFGGFAARELATRIDDA
                     KPKVILSASCGLEPGRIVAYKPLLDEAISLSQHKPDACLILQRPQAEAPLVAGRDHDW
                     AKVRDHALIHARSVYDCVPVEATDPLYILYTSGTTGRPKGVVRDNGGHMVALEWSMKN
                     LYGIDPGEVYWAASDVGWVVGHSYIVYAPLFHGCTTILYEGKPVGTPDAGAFWRVIAE
                     HGCAAMFTAPTAFRAIKKEDPQGKFLAQYDLAKFRTLFLAGERADPDTIMWAEKLLKV
                     PVIDHWWQTETGWAIAGNPVGLGMLPVKYGSPTVTMPGYDLRVVDEACREVAPGTMGS
                     IVLKLPLPPACLPTLWNADERMRESYLDEFPGYYKTADAGFKDEDGYVFVMGRTDDII
                     NVAGHRLSTGGMEEVLASHPAVAECAVLGIKDELKGEVPCGFIVLKSGVNRPP"
     gene            1853..3478
                     /locus_tag="VNY79_13745"
     CDS             1853..3478
                     /locus_tag="VNY79_13745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019403315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HWX73557.1"
                     /translation="MPTPYDTGLDRNAANHQPLTPLSFLARAATVYPDVTAIIHGRRS
                     STYREFYARAKKLASALARRGIKRGDTVSVMLANTPAMVEAHYGVPMTGAVLNTLNTR
                     LDAGILAFTLDHAETRVLIIDREFSKVMKDALAGAKAKPLVIDYDDPEFSGAGERLGD
                     LEYEDFLNAGDADFAWRMPNDEWDAISLNYTSGTTGDPKGVVYHHRGAYLLAMGNVIT
                     CGMQRHPIYLWTLPMFHCNGWCFPWTLSIVAGTHVCLRAVRAAPVFDSIAAHKVTHLC
                     GAPIVMSTLLNAAPQEKKPLPHVVEFVTAAAPPPEAVLAAMKAAGFNVTHVYGLTETY
                     GPATVNDWHGDWDSLPADEQAAKKARQGVRYPVLEELDVLDPATMQPVARDGETLGEV
                     MFRGNVLMKGYLKNKASTEAAFAAGWFHSGDLGVIHPDGYIQLKDRSKDIIISGGENI
                     SSIEVEDALYKHPAVAAVAVVAKPDEKWGETPCAFVELKPGASATAEELIAWCRSHLA
                     AYKCPRHMVFADIPKTSTGKLQKFKLREVAKGV"
     gene            complement(3575..3772)
                     /locus_tag="VNY79_13750"
                     /pseudo
     CDS             complement(3575..3772)
                     /locus_tag="VNY79_13750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013503820.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0003729 - mRNA binding [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system HicA family
                     toxin"
     gene            complement(3794..4009)
                     /locus_tag="VNY79_13755"
     CDS             complement(3794..4009)
                     /locus_tag="VNY79_13755"
                     /inference="COORDINATES: protein motif:HMM:NF020542.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1902 domain-containing protein"
                     /protein_id="HWX73558.1"
                     /translation="MSKPVIFTISAVWDGDASVWSGHCDEIPAAADAPTLDALLAKVS
                     GHGARSTSRQPSRCRSLLAIPSDHCAA"
     gene            complement(4196..4375)
                     /locus_tag="VNY79_13760"
     CDS             complement(4196..4375)
                     /locus_tag="VNY79_13760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015928751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF465 domain-containing protein"
                     /protein_id="HWX73559.1"
                     /translation="MAIESHLAELERRHQALEQEISEALAHPSTDDLKIAELKRRKLH
                     VKDEISRLKQDAVVH"
     gene            4583..4789
                     /locus_tag="VNY79_13765"
     CDS             4583..4789
                     /locus_tag="VNY79_13765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009799179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF465 domain-containing protein"
                     /protein_id="HWX73560.1"
                     /translation="MTKEEERELRAQLARLQQEHRDLDAAIAALQDSPGADVIQVQRL
                     KKRKLQLRDRITFIEDQLTPDIIA"
BASE COUNT          901 a         1570 c         1494 g          829 t
ORIGIN      
        1 ccggcggccg gttgacgccg gatttgagca cgatgaagcc gcacggcacc tcgcccttga
       61 gctcgtcctt gatgccgagc acggcgcatt cggcgacggc gggatgcgag gcgagcacct
      121 cctccatgcc gccggtcgaa agccgatggc cggcgacatt gatgatgtcg tcggtgcggc
      181 ccatcacaaa gacgtagccg tcctcgtcct tgaagccggc gtcggcggtc ttgtagtagc
      241 cgggaaattc gtcgaggtag ctttcgcgca tgcgttcgtc cgcgttccac agcgtcggca
      301 ggcacgccgg cggcagcggc agcttgagca cgatcgagcc catcgtgccc ggcgcgacct
      361 cgcggcacgc ctcatcgacg acgcgcagat cgtagccggg catcgtcacc gtcggcgagc
      421 cgtatttgac cggcagcatg ccgaggccga ccggattgcc ggcgatcgcc cagccggtct
      481 cggtctgcca ccagtgatcg atcaccggca ctttcagaag cttctccgcc cacatgatcg
      541 tgtccggatc ggcgcgctcg ccggccagga acagcgtgcg gaatttcgcc aaatcgtatt
      601 gcgccagaaa cttgccctgc ggatcttcct tcttgatggc gcggaacgcg gtcggcgccg
      661 tgaacatggc ggcgcagccg tgctcggcga tcacgcgcca gaacgcgccg gcatcgggcg
      721 tgccgaccgg cttgccctcg tagaggatcg tcgtgcagcc gtggaagagc ggcgcataga
      781 cgatgtagct gtgtccgacc acccagccga cgtcggacgc cgcccaatac acctcgcccg
      841 gatcgatgcc gtagagattc ttcatcgacc attcgagcgc gaccatgtgg ccgccattgt
      901 cgcgcaccac gcccttcggg cgccccgtcg ttcccgaggt gtagaggatg tagagcggat
      961 cggtcgcctc gaccggcacg caatcgtaga ccgagcgggc gtggatgagc gcgtgatcgc
     1021 gcaccttggc ccagtcgtgg tcgcggccgg cgaccagcgg cgcttccgcc tgcggacgct
     1081 gcaggatgag gcaggcgtcg ggcttgtgct gcgagagcga gatcgcctcg tcgagcagtg
     1141 gcttgtaggc gacgatgcgg cccggttcga ggccgcagct tgccgagagg atcaccttcg
     1201 gcttggcgtc gtcgatgcgg gtggcgagtt cgcgcgcggc aaagccgccg aacacgaccg
     1261 aatgaatggc gccgatgcgc gcgcaggcga gcatgccgat cgccgcctcc ggcaccatcg
     1321 gcatatagag gatgacgcgg tcgcccttgc cgacgccgag atcgcgcagc atggcggcga
     1381 gcacctgcgt ctcggtcatc aggcggtgat aggtgatggt gcgcttgacc ccggcgagcg
     1441 gcgaatcgta gatgatcgcg gcctgctcgc cgcgcccagc gttgacgtgg cggtcgaccg
     1501 cattgaagca ggtattgcag acgccgccga cgaaccagcg gccgtaaatt cccgccgccg
     1561 cgtcgaaaac ggttttgggc ttttcgaacc agtcgatagc tgcggccgct tcggcccaga
     1621 agccttgcgg gtcgcgctgc cagcgggcgt agacctcgtg gtagcggctc gagcgggcgt
     1681 ccatggcgcg ttctccaaag tctctacttt accccaaacg cgagcggcaa atggcgacgg
     1741 gattaggaca aagataatcg ttttaattcg ccgttcgcca ttgatccaat ggccgcgcca
     1801 ttgatcagag tcgcttgcat tctataggct cgggttccag ggaggatcga ccatgccgac
     1861 gccctacgat accggcctcg accgcaacgc ggcgaaccac cagccactca cgccattgtc
     1921 cttcctggcg cgcgcggcaa cggtctaccc ggacgtgacc gcgatcatcc acggccgacg
     1981 ctcctcgacc taccgggagt tctatgcgcg cgcgaaaaag ctcgcatcgg cgctggcgcg
     2041 gcgcggcatc aagcgcggcg acacggtttc ggtcatgctc gccaacactc cggccatggt
     2101 cgaggcgcat tacggcgtgc cgatgaccgg cgccgtgctc aacaccctca acacgcggct
     2161 cgacgccggc atcctcgcct tcacgctcga ccatgccgag accagggtgc tcatcatcga
     2221 ccgcgaattt tccaaggtga tgaaagacgc gctcgctggc gccaaggcaa agccgctggt
     2281 catcgactat gacgacccgg aattttccgg cgccggcgaa cgcctcggcg atctggaata
     2341 cgaggacttc ctgaacgccg gcgacgccga tttcgcctgg cggatgccga atgacgagtg
     2401 ggacgctatc tcgctcaact acacgtcggg gacgaccggc gatccgaagg gcgtcgtcta
     2461 ccatcatcgc ggcgcctatc tgctcgcgat gggtaacgtc atcacctgcg gcatgcagcg
     2521 gcacccgatc tatctgtgga cgctgccgat gttccactgc aacggctggt gctttccgtg
     2581 gacgctgtcg atcgtcgccg gcacgcatgt ctgcctgcgg gcggtgcgcg cagcgccggt
     2641 cttcgactcg atcgccgcgc acaaggtcac ccacctgtgc ggcgcgccga tcgtgatgtc
     2701 gacgctgctc aacgccgcgc cgcaggagaa gaagccgttg ccgcacgtcg tcgagttcgt
     2761 gaccgcggcg gcgccaccgc ccgaggcggt gctcgcggcg atgaaagccg ccggcttcaa
     2821 cgtcacccac gtctacggcc tgaccgagac ctacgggccg gccaccgtca acgactggca
     2881 tggcgactgg gacagcctcc cggctgacga gcaggcggca aagaaggcgc gccagggcgt
     2941 gcgctatccg gtgctcgagg agctcgacgt gctcgatccg gcaacgatgc agccggtcgc
     3001 gcgcgacggc gagacgctcg gcgaagtgat gttccgcggc aacgtgttga tgaaaggcta
     3061 tctcaagaac aaggcctcga ccgaggcggc gttcgccgcc ggctggtttc actccggcga
     3121 tctcggcgtc atccatcccg acggctacat ccagctcaag gaccgctcca aggacatcat
     3181 catttccggc ggcgagaaca tttcctcgat cgaagtcgaa gatgcgctct acaagcatcc
     3241 ggcggtcgcc gccgtcgccg tggtcgccaa gcccgacgag aaatggggcg agacgccatg
     3301 cgcattcgtg gagctcaagc ccggcgccag cgccacggcc gaagagctga tcgcctggtg
     3361 ccgctcccac ctcgccgcct acaagtgccc acgccatatg gtgttcgccg atattccgaa
     3421 gaccagcacc gggaaactgc aaaagttcaa gctgcgcgag gtggcgaagg gggtgtgaag
     3481 ccgccggcat cttttcccgc gacaggacgg cacctgcatg gctgggaaca gaatactctc
     3541 gcgccgttga ggggcggccg gcacgtttta ttactcaaaa ggctttcggc agccctgcct
     3601 gccggagaac ggcattggcg gtatgacggc tcgcgatgcc gaccgcgact ggaaaattgc
     3661 gcttcgtgat cgggctatac cagatttcgt ggcgcccttt gccttagcgc acgaaagaac
     3721 aaccagccgc tcgcaacaaa tcccgcagag cgcggtcgaa ttgaggcgcc atcagatcgt
     3781 cgcgggctct gcttcacgca gcgcagtgat ctgaaggaat agcgaggagg gatcgacatc
     3841 gggatggttg tcgggaagta gatcgagcgc catggcccga gacttttgcc agcaacgcgt
     3901 ccagcgtcgg cgcatcagcg gcggccggaa tttcatcaca atggccgctc cagactgacg
     3961 catcgccgtc ccagacagcg gaaatcgtaa agatcacggg tttgctcatt ccaaattccc
     4021 taacggcaat caagcccgga cgatgccact ctcgttcaga tacggggttt gctcgaccct
     4081 aggaccaccc ggtcggggat aagtagaatt ttggaataac gaaactatcc tcgtccccgc
     4141 ttttcgcggg gacgcgcgga caattcaacc acaacctaag tctactctaa atctactaat
     4201 gtacgaccgc gtcctgcttc aggcgggaaa tctcgtcctt gacgtgcagc ttgcgccgct
     4261 tcaattcggc aatcttcaag tcgtccgtcg acggatgggc aagcgcttca ctgatctcct
     4321 gctccagcgc ctggtgccgt ctctcgagtt ccgcaagatg cgattcaatt gccatgtggc
     4381 atatctcctt gcgtcagaat tgctgccgac cccctacacc agcacaaccg catgcaatta
     4441 tactccaatt ccgccgccgc gaaaatcccg ctgtgcatcg cgtcagccgc gggcttgtcg
     4501 gacattgacc aaaacgcgat aatccatagg gacttacggc ctaagagcgt gccaccggcg
     4561 tgccaggcgc gacaaggcgg cgatgacaaa agaggaagaa cgcgagcttc gggcgcagct
     4621 tgcgcgcctg cagcaggagc atcgcgacct cgacgccgcg atcgctgcgc tgcaggactc
     4681 gcccggcgcc gacgtgatcc aggtgcagcg cctcaagaaa cgcaagttgc aattgcgcga
     4741 ccgcatcacc ttcatcgagg atcagctcac ccccgatatc atcgcctagc cggc
//
LOCUS       DATMQB010000475         9541 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2742112, whole genome shotgun sequence.
ACCESSION   DATMQB010000475 DATMQB010000000
VERSION     DATMQB010000475.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9541)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9541)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9541
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2742112"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..327)
                     /locus_tag="VNY79_13770"
     CDS             complement(<1..327)
                     /locus_tag="VNY79_13770"
                     /inference="COORDINATES: protein motif:HMM:NF025152.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4175 family protein"
                     /protein_id="HWX73561.1"
                     /translation="MLLDRDRRGMIVGALRPLAGHRTRAARCPRGRLRFPGIYLGLRS
                     IFWSLVRAKSDDDLREVAARLWSMAVGLEDGDISEAQAALRAAQEALRNALDRGASDQ
                     ELKQLMD"
     gene            1043..1351
                     /locus_tag="VNY79_13775"
     CDS             1043..1351
                     /locus_tag="VNY79_13775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015933014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73562.1"
                     /translation="MRAKSLAGQTSNLESLPLFATDDAIGAALLGPKRVAEFKQIVPL
                     LEARGLPKVDQLMGGRYTRAVIAFFDHQYGLDRGGDDLPLAPDGTERFDQWRKQKRHS
                     "
     gene            1555..2526
                     /locus_tag="VNY79_13780"
     CDS             1555..2526
                     /locus_tag="VNY79_13780"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="integrase"
                     /protein_id="HWX73563.1"
                     /translation="MIKLWQTEASSPYHALEASSRHPYDIYARMIVATVGERRVDALD
                     GRDIRRWHAEWSAPLEPGGKPRIAAARIAIIVLKTALTFAATCRKPGCADLRNILRDM
                     RFAAPRPRKEAPTAAEIVAARKAAHEIGHPPAALAYALQFDGTMRQWDVTGKWVPLGD
                     KKPSLIIDGTSKWVGPMWSQIDENLILRYTPAKTEFTSAAEVVLDLRMLPMVMEEMAK
                     VPEEARRGPLIVNPRTGLPYRNWYFGQVWRKVRKLAGIRKEVWNRDTRAGGVTEGREA
                     DAQMDDLAKQAGHANKRTTARVYDRDRLEAARRVATARKTHRERGVS"
     gene            2666..2866
                     /locus_tag="VNY79_13785"
     CDS             2666..2866
                     /locus_tag="VNY79_13785"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73564.1"
                     /translation="MGDIIKFPDEGRIVRFGRAGAQDESATVIILPVIRIERHADARA
                     EEVEPRSHPPTPNGGRRRMRRR"
     gene            complement(3319..3870)
                     /locus_tag="VNY79_13790"
     CDS             complement(3319..3870)
                     /locus_tag="VNY79_13790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009029663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1254 domain-containing protein"
                     /protein_id="HWX73565.1"
                     /translation="MIRLLLWILGAILLGGIVHLSTVLAMPQTAKQDAYSRLAPLTPV
                     NAVALLPPPTAKASLMPFMDPAFAVAVCRYDISSGPLKFKAPVSQAYTSVTFYTRKSV
                     AYYAINDRAAGRRSIELDLMTAEQHAQLPAEEDVTAADRLIIESPTTTGLILLRTLAP
                     EPGLMPMARRALAGAQCHVEESQ"
     gene            complement(3867..4445)
                     /locus_tag="VNY79_13795"
     CDS             complement(3867..4445)
                     /locus_tag="VNY79_13795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011442386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1214 domain-containing protein"
                     /protein_id="HWX73566.1"
                     /translation="MRLFFGSCFTLILAAVVGLGTTWLTLTRGVAFGALSIGAWTAWP
                     KSGSVDIDPYARAIVSRTGQLPVGTGDGVAFYARSDDAGNAFDGRCTFVISGSTPAAR
                     YWTLTLYDAEGRPVANTIDRHGFTSAEIAREADGRFAISVAPRARPGNWLPTGGIEQF
                     VLVWRLYDTPIGVATRTTKSGPMPAVARKDCS"
     gene            complement(4495..6735)
                     /locus_tag="VNY79_13800"
     CDS             complement(4495..6735)
                     /locus_tag="VNY79_13800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012563755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008658 - penicillin binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="PBP1A family penicillin-binding protein"
                     /protein_id="HWX73567.1"
                     /translation="MFPDPGTDWKLKLKRLLLDFDARIDSAIFEGGKWAREIYERFTA
                     FMDHCHVAGWRRWLLVEPISEGTTLGTGGLLLMLLLALPAFRETSDDDWLKKSDLAVT
                     FLDRYGNEVGNRGIKHNDSVPLEDMPDHLVKATLATEDRRFYEHFGIDFYGTVRALMT
                     NAKAGGVVQGGSTITQQLAKNLFLSNERTIELKINEAFLALWLETRLSKNEILKLYLD
                     RAYLGGGAFGVDAAALYYFGKSVRDVTLAEAAMLAGLFKAPSKFSPLANLPAARARAN
                     VVLDNLVDNGFMTEGQVYGARRNPATPIDRTEEDAPNYYLDWAFDEMRKLVDTFPKSV
                     NERFFVVRTALDSNLQRYAQHTIESALRQYGHDYGASQSATVIADLEGSVRAMVGGRD
                     YGESQFNRAVDALRQPGSSFKPYVYATALANGFKPSSVVVDSPVCIGNWCPHNYSGGY
                     SGSMTLINAITHSINVIPVKLSIALGDGNAKLGRAKIIQTARNFGIYTPLPDTPSLPI
                     GADEVNVLEHAVAYATFPNLGKAVAPHAALEVRTGTGELVWRFDRDGKRPEQVISPQV
                     ALDMITMMNSVVENGTGKRAQLDGIKVAGKTGTTNGWRDAWFVGYTGNFAGAVWMGND
                     DYSPTKRMTGGTIPALVWHDIMAYAHQGVELRPLTGLPAPQRAPAVADTAFKGGQGPP
                     QALLTRKATEALVRVEHLLDDASHALAAQAGGAGKLGARDDHGDRGNTLTAATERQSA
                     GISRRD"
     gene            6999..7538
                     /locus_tag="VNY79_13805"
     CDS             6999..7538
                     /locus_tag="VNY79_13805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013165515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YcgN family cysteine cluster protein"
                     /protein_id="HWX73568.1"
                     /translation="MAAEHGSAEIPFWRRKSLAEMTDSEWESLCDGCGRCCLNKLEEE
                     GTDRTFYTNVGCRLLDGDACRCRDYAHRQEEVDDCVRLTPESLKTITWLPPSCAYVLL
                     AEGKDLYWWHPLVSGDPETVHAAGVSVRGRLGASETEVPDEDLEDYIVSWPLRLPKPA
                     RRRPREQPRTRSSRRAEGD"
     gene            7590..9182
                     /locus_tag="VNY79_13810"
     CDS             7590..9182
                     /locus_tag="VNY79_13810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018182685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="MDR family MFS transporter"
                     /protein_id="HWX73569.1"
                     /translation="MTLELPPDGAHGMAAHVTDEEPERLEEDAAKRYPARPAALRAEE
                     HQPAAPPLDHAAIRTMIAGIMLALFLSALEQTIVAPALPAIGRSLGHIGDLPWVVTAY
                     LLAATATTPLFGKLSDIHGRRTILLLSISIFVVGSVACGLAPAMWVLILGRALQGIGG
                     GGLLPIVQTIIADLLSPRERPLVQSYVSVTFMSASILGPVLGGLLTDHLHWSIIFWLN
                     LPLGTVALMMTARALRTLPRHERPHRLDIVGGALMVGAALALMLALTWGGVRYGWASW
                     GIVGLLVGSAVLWILFVARLLTAPEPFIPVAILRGRVTSAITCASFFAIGTVIGVTIY
                     TPLYCQLVLGASASASGLVLIAFMAGTTVGSLTAGRLIVRLTHYMRVPIVGLVIAVAV
                     LGLLAAVPARLSLGVFALLLAVLGSALGPMYTVATVVMQNAVKRHQLGTATGTLNLFR
                     VLGGAIVVAAFGAIVIGGAGDAASVMMLGKLAGGHGDFASAFRFVFIAAAVCLAVALA
                     CVLAVEERPLHGPVRLADPAAE"
BASE COUNT         1587 a         3128 c         3183 g         1643 t
ORIGIN      
        1 gtccatcagc tgcttgagct cctggtcgct ggcgccgcgg tcgagcgcgt tgcgcagcgc
       61 ctcctgcgcg gcgcgcaagg ccgcctgcgc ctcggaaata tcgccgtcct cgaggccgac
      121 cgccatcgac cacagccgcg ccgctacttc gcgcaggtcg tcgtcgctct tggcgcgcac
      181 cagcgaccag aagatcgagc gcagcccgag atagatgccg ggaaagcgaa gccggccgcg
      241 aggacaccgc gctgcgcgag ttcgatggcc ggcgagcggc cgtagtgcgc cgacgatcat
      301 cccgcggcgg tcccgatcaa ggaggatgag gcgccgaaat ttgtgagggg atcaaagggg
      361 atactcgatg tcacacggga aatagcccgg gcgttcgtcg tgaaacatcg accagaccac
      421 tgtccgtaag tacaaggcgg cgctgagtgt cgcctacggt gcagggctgc gggtttccga
      481 ccggccgatt accccatctt tcggagcgaa gcggacattc agcgagccgc gcctacaact
      541 ggattatgag tacgcgccct tgaggttttc acctcggcta atccggccga tggccggaag
      601 acggtccctt caatcccagc cacccgccta cagactgaca ggaatagacg gggcgggcgg
      661 gggcggtcag gaaatgtcgt aaccgtccac ctcggcggtc gaaaaactag ccacttgacc
      721 gggtcctcgc gatcgcgatg gccgataaag gctgccgcgg ccgcgcgcat gaagctacgc
      781 cgctcggctt ggcgcagcgc ggccggatcg gcgcgcaaag ggatcggtgt ctgtgcggtc
      841 atggagatca cctccgccgc ggaggatacg ccgacccggc cgccgcggag gcgacgcgtc
      901 gcgggggaat ttcaaaacgc ggtcggggcg ggggcttttg aaaccggttc caatggggta
      961 atagacgacg gtacgactca gccgcagcag gccgaacgcc ccctttacgc ccccggtccg
     1021 ggaacgggcg tggaagtcgt atatgcgtgc caaaagcctc gccgggcaga catccaacct
     1081 cgagtccttg cccctcttcg cgaccgatga cgccatcggc gccgccttgc tcggccccaa
     1141 gcgtgtggcc gagttcaagc aaatcgtgcc gctgctcgaa gcccgcggcc tgcccaaagt
     1201 cgatcaattg atgggaggtc gctatacgcg ggcagtcatc gcctttttcg atcaccaata
     1261 cggactcgat cgcggcggcg atgacctgcc gcttgcacct gatggaacgg agcgtttcga
     1321 ccaatggcga aaacaaaagc gccacagcta gtgtgggacc gaggcgtgcc gatctggcgc
     1381 gcgacgaggg cggccatcaa ggccggattc ccgaccgagc gcgcgaatct gaaattcttt
     1441 gcggacaacg aggccgcact ggtcgcgcgc tgctaccgcc tcacggctga aatgaacgaa
     1501 tggctatccg gccgtcgcag ccgggagact gccttcgacg gcaccatcgg caccgtgatc
     1561 aagctgtggc agactgaggc atcaagcccg taccacgcgt tggaagcgtc gtcccggcat
     1621 ccttacgaca tctatgcgcg catgatcgtc gccacggtcg gcgagcgccg cgttgacgcg
     1681 ctcgacggtc gcgatattcg ccgctggcat gccgagtggt cggctccgct tgaaccgggc
     1741 ggcaagccgc gcatcgctgc cgcacgcatc gcaattatcg ttctgaaaac cgcgctcaca
     1801 ttcgccgcga cgtgccgcaa acccggctgt gctgatctga gaaacattct tcgcgacatg
     1861 cgctttgcgg caccacgccc acgcaaggaa gcgccgaccg ccgccgagat cgtcgccgcc
     1921 agaaaggccg cgcacgagat cggccatcct cccgccgcgc tagcctatgc gctgcaattc
     1981 gacggcacga tgcggcaatg ggacgtgacc gggaaatggg tgccgctcgg ggacaagaag
     2041 ccgtcgttga tcatcgacgg cacctccaaa tgggtcggtc cgatgtggtc gcagatcgat
     2101 gaaaatctga tcctgcggta cacgccagca aagaccgagt tcacctcggc ggccgaggtg
     2161 gtgctcgatc tccgcatgct gccgatggtg atggaggaaa tggcgaaggt gccggaagag
     2221 gcccggcgcg gcccgctgat cgtgaatccg cgcacaggct tgccgtaccg caattggtac
     2281 ttcggtcagg tgtggagaaa ggtccgcaag ctcgctggca tccgcaagga agtgtggaac
     2341 cgcgacaccc gcgccggtgg cgtgaccgag ggccgcgagg ccgacgcgca gatggatgat
     2401 ctcgcgaaac aggccgggca cgcgaacaag cgcaccaccg ctagggtcta cgaccgcgac
     2461 cggctcgaag cggcgaggcg cgtggccact gctcgcaaaa cgcaccggga acgaggtgtg
     2521 tcgtaatgtg tcgcgcgctc caaccaattc aaggcgttag cggcgttcca cataaacggc
     2581 gcgttaacct tgcatgccac ttaatcccaa tgccgacctg cgcgggtcgg gggttatccg
     2641 cgctgaccgg cagaggacgg cagcggtggg cgacatcatc aagtttccgg acgaggggcg
     2701 cattgtgcgg ttcggccgcg ccggcgcgca ggacgaatcc gcgacggtga tcattctccc
     2761 tgtcatccgc atcgagcgcc acgccgatgc gcgcgcagaa gaagtcgagc cgcgcagcca
     2821 tccgccaact cccaatggcg ggcgccgccg gatgagacgc cgctgagcgg tcctgcgtct
     2881 atagcgccaa tccgccgtcg tcagacgcaa gccgcgcgcg gctttcgtcg cgcttatttt
     2941 gcccgccggt tgctcgagcc tcggcgattt tgaccggttg catccggtcc tcgtcaccga
     3001 cgacattcac gcctgggtcg ggcacgaagc ggcggcacgg gccggcggcc gaccggctca
     3061 atgcgctggc gcgcgtcggc gagaacagcc tgaccatcgc ctgggtgcat cactcgctga
     3121 cccagcgttg cgcggcctat cgctttgctc ttgatcatct ggtggcggca gagtcggaaa
     3181 gggttgccgc ccgcgcagac gtcgtgctca cgaaaattgc agcaaaggat cgccgcgaac
     3241 caggtggtgc cgttgccgcg cttcgccgcc gtgtcgggaa aattgcaagg cgcgaagcga
     3301 ccgccggccg gtaggctgct actgcgactc ctcgacatgg cattgggcgc cggcaagagc
     3361 gcggcgcgcc atgggcatca agcccggctc cggcgccaat gtccgcagca ggatcagtcc
     3421 cgtcgtggtc ggcgactcga tgatcaaccg gtcggccgcg gtcacgtcct cctccgccgg
     3481 aagctgcgcg tgctgctcgg cggtcatgag atcgagctcg atcgagcggc ggccggcggc
     3541 gcgatcgttg atcgcgtaat aggcgacact tttgcgggta tagaacgtga ccgacgtgta
     3601 ggcttggctc accggcgcct tgaacttgag cggcccgctc gaaatgtcgt agcggcagac
     3661 cgcgacggcg aacgccgggt ccataaacgg catcagcgaa gccttcgcag tcggcggcgg
     3721 gagcagggcc acggcattga ccggcgtgag cggcgccagc cgcgaataag cgtcctgctt
     3781 cgccgtctgc ggcatcgcaa gcacggtcga caggtggacg atgccgccga gcaggattgc
     3841 gccgagaatc cacagcagca gccggatcat gagcagtcct ttcgcgccac cgcgggcatc
     3901 ggtccggact tcgtcgtgcg cgtcgccacg ccgatcggcg tatcgtagag gcgccacacc
     3961 aggacgaatt gctcgatccc gccggtcggc agccaattgc ccggccgcgc gcgcggcgcg
     4021 acgctgatcg cgaagcggcc gtccgcttcg cgcgcgatct ccgcgctagt gaagccgtgc
     4081 cggtcgatgg tgttcgccac cggccgtccc tcggcgtcgt agagcgtgag cgtccagtag
     4141 cgcgccgccg gcgtcgaacc gctgatcacg aaagtgcagc ggccgtcgaa cgcgttcccc
     4201 gcatcgtcgc tgcgggcgta gaaggcgacg ccgtcgccgg ttccgaccgg cagttggccg
     4261 gtgcgggaga cgatcgcccg cgcgtaaggg tcgatgtcca ccgagccgct cttcggccag
     4321 gcggtccacg caccgatgct cagcgcgccg aaggcgacgc cgcgcgtgag cgtcagccag
     4381 gtcgtgccga gcccgacgac cgccgcaagt atcagcgtga agcaggaacc gaaaaacagg
     4441 cgcacgttct acccgcaagg aaaggcgatt cttcgccagc cagtttaacc gcgatcagtc
     4501 gcgacgtgaa atcccggcgg actgacgttc ggtcgcagcg gtgagcgtgt tgccgcggtc
     4561 gccatgatcg tcgcgcgcgc caagcttgcc agcgccgccg gcctgagccg cgagcgcatg
     4621 gcttgcatcg tcgagcaggt gctcgacgcg gaccagcgcc tcggtggcct tgcgggtgag
     4681 cagagcttgc ggcggtccct ggccgccctt gaacgcggtg tccgccaccg ccggggcgcg
     4741 ctgcggcgcc ggcaggccgg ttaacggccg cagctccacg ccctggtggg cgtaggccat
     4801 gatgtcgtgc cacaccagcg ccgggatggt gccgccggtc atgcgtttgg tcggcgaata
     4861 gtcatcgttg cccatccaca ccgcgccggc gaaattgccc gtgtagccaa cgaaccaggc
     4921 gtcacgccag ccgttggtcg tgccggtctt gccggcgacc ttgataccgt cgagctgggc
     4981 ccgtttgccg gtgccgtttt cgaccaccga gttcatcatc gtgatcatgt cgagggcaac
     5041 ttgcgggctg atcacctgct cgggccgctt gccgtcgcgg tcgaagcgcc acaccagttc
     5101 gcccgtgccg gtgcgcactt caagcgcggc gtgcggggcg accgccttgc cgagattggg
     5161 gaaggtcgca taggcgaccg cgtgctcgag cacgttcacc tcgtcggcgc cgatcggcag
     5221 cgaaggcgtg tcgggcaacg gcgtgtagat accgaagttg cgcgcggtct gaatgatctt
     5281 ggcgcggccg agcttggcgt tgccgtcgcc aagcgcgatc gaaagcttga ccggaatgac
     5341 gttgatcgag tgggtgatgg cgttgattag cgtcatcgac ccggaatagc cgcccgaata
     5401 gttgtgcggg caccagttgc cgatgcagac cggcgagtcg acgaccaccg agctaggctt
     5461 gaatccgttc gccagcgcgg tcgcatacac gtacggcttg aacgaggatc caggctggcg
     5521 tagcgcgtcg accgcgcggt tgaactggct ttcgccgtaa tcgcggcctc cgaccatcgc
     5581 gcgcaccgag ccttcgaggt ccgcgatcac ggtcgccgac tggcttgcgc cataatcgtg
     5641 gccgtactgc cgcaacgccg attcgatcgt gtgctgggcg tagcgctgaa gattcgagtc
     5701 gagcgcggtg cgcactacga agaatcgctc gttgaccgat ttcggaaacg tgtcgacgag
     5761 cttgcgcatc tcgtcgaagg cccagtcgag atagtagttc ggcgcgtcct cttcggtgcg
     5821 atcgatcggg gtcgccgggt tgcggcgggc gccatagacc tgaccctcgg tcatgaatcc
     5881 gttgtcgacc agattgtcga gcacgacgtt ggcgcgcgcg cgcgctgccg gcaggttcgc
     5941 gagcggcgag aacttgctcg gcgccttgaa caggccggcg agcattgccg cttcggcgag
     6001 cgttacgtcg cgcaccgatt ttccgaaata atacagcgcc gcggcgtcga cgccgaaggc
     6061 gccgccgccg agataggcac ggtcgaggta gagcttgagg atttcgttct tggagagccg
     6121 cgtctccagc cacagcgcga ggaacgcctc gttgatcttg agctcgatag tgcgctcgtt
     6181 cgacaggaac aggttcttgg cgagctgctg ggtgatggtg gacccgccct gcaccacgcc
     6241 gccggccttg gcattggtca tcagcgcgcg gacggtgccg tagaagtcga tgccgaaatg
     6301 ctcgtagaag cgccggtcct cggtcgccag agttgccttg accagatggt cgggcatgtc
     6361 ctcgagcggc accgagtcgt tgtgtttgat gccgcggttg ccgacctcgt tgccgtaacg
     6421 gtcgaggaaa gtcaccgcga ggtcggattt tttcagccag tcgtcgtcgg acgtttcccg
     6481 gaacgcgggg agggcgagca ggagcatgag caggaggccg ccagtgccga gcgtcgtccc
     6541 ctccgagatt ggctcgacca agagccagcg ccgccagccg gcgacgtggc aatggtccat
     6601 gaacgcggtg aagcgctcat atatttcgcg cgcccatttg ccgccttcga aaatggcgga
     6661 atcgatgcgc gcgtcgaaat cgagcagcag ccgcttgagc ttgagcttcc aatccgtacc
     6721 cggatccgga aacaggtccg tcacgcgtga gcactccagc agcgggtttc gcccgcatag
     6781 tttatcatgg ctgccggtta agacttagcc gagccagcgc ctgcggccaa tgacgcagcc
     6841 gccacagggt gaacggaaat tgggggcaaa ttgggcctgt tggccatagg cgtgcggccc
     6901 cattttatgc ctgagcaccg cagcatggcg ccaaccaccg gtcaggacta gggtttccga
     6961 acccggccgg cggacggcga atcactctgg agaatcaaat ggcagccgag cacggctcag
     7021 ccgagatccc gttctggcgg cgaaaatcgc tggcggagat gactgattcg gaatgggaga
     7081 gcctctgcga cggctgcggc cgctgctgtc tcaacaagct ggaagaggag gggaccgacc
     7141 ggaccttcta taccaatgtc ggctgccgcc tgctcgacgg cgatgcctgc cgctgccgcg
     7201 actacgcgca ccggcaggaa gaggtcgacg actgcgtccg gctcacgccc gaaagcctga
     7261 aaacgatcac atggctgccg ccgtcctgcg catacgtgct gctcgccgag gggaaggatc
     7321 tttattggtg gcatccgctc gtgtccggcg acccggagac cgtgcacgcc gccggcgtct
     7381 ccgtccgcgg ccgcctcggg gcgagcgaga ccgaggtgcc tgacgaggac ctcgaggatt
     7441 acatcgtcag ctggccgttg aggctgccga agccggcgcg gcggcgtccg cgggagcaac
     7501 ctcgtacccg gtcttcgcgc cgagccgagg gcgactgagg ccgtgcaccg ggttctgtac
     7561 gttcgcccgc ggcctttccg acagatgaca tgacactcga acttcctccc gacggcgctc
     7621 acggcatggc ggctcacgtc accgacgagg agcccgagcg gctcgaggag gatgcggcga
     7681 agcgttaccc ggcgcggccc gcggcgctgc gggcggagga gcatcagcca gcggccccgc
     7741 cgctcgatca cgccgccatc cgcacgatga tcgccggcat catgctggcg ctgttcctct
     7801 cagcccttga gcaaaccatc gtggcacccg ctctgccggc gatcggcagg agcctcggtc
     7861 acattggcga cttgccctgg gtggtcactg cctatctcct ggcggcgacg gcgacgacac
     7921 cgctgttcgg caagctctcc gatatccacg gccggcgcac gattctgctg ctgtccatca
     7981 gcatctttgt cgtcggctcg gtcgcctgcg ggctggcgcc ggccatgtgg gtgctcatcc
     8041 tcggccgcgc tttgcagggg atcggcggcg gcgggctgtt gccgattgtg cagacaatca
     8101 tcgccgacct cctctcgccg cgcgagcgcc cgctggtgca gagctacgtc tctgtaacct
     8161 tcatgagcgc cagcatcctc gggccggtgc ttggcggatt gctgaccgat cacctgcact
     8221 ggtcgatcat cttctggctc aacctgccgc tcggcaccgt ggcgctcatg atgaccgcgc
     8281 gggcgctgcg caccctgccg cggcacgagc ggccgcaccg gctcgacatt gtcggcgggg
     8341 cactcatggt cggcgcagcg ctcgccctga tgctggcgct cacctggggc ggcgtgcgct
     8401 atggctgggc atcgtggggc atcgtcggtc tgctcgtcgg ctccgccgtg ctctggatat
     8461 tgttcgtggc gaggcttctc accgcgccgg agccgttcat tcctgtcgca attcttcgcg
     8521 gcagagtgac gagcgccatc acttgcgcga gcttttttgc gatcggtacg gtgatcggcg
     8581 tgaccatcta cacgccgctc tactgccagc tcgtgctcgg cgcttcggcg agcgcctccg
     8641 gcctcgtgct gattgcgttc atggccggca ccacggtcgg ctcactcact gccggccgcc
     8701 tgatcgtccg gctcacgcac tacatgcgcg tgccgatcgt cgggcttgtc attgccgtcg
     8761 ccgtgctcgg gcttctcgcc gccgttccgg cgcgcctttc gctcggcgtc tttgcgctgc
     8821 tgctcgccgt gctgggttcc gcgctcggac ccatgtacac ggtcgccacc gtcgtgatgc
     8881 agaacgcggt aaagcggcat cagctcggca ccgccaccgg cacgctgaat ctctttcgcg
     8941 tgcttggggg agcgatcgtc gtcgccgcct tcggcgccat cgtcatcggc ggcgccggcg
     9001 atgccgcaag cgtgatgatg ctggggaaac ttgcgggcgg acacggcgat tttgcgtcgg
     9061 cgttccgctt tgtgttcatc gccgctgcgg tctgcctcgc ggtcgcactg gcctgcgtgc
     9121 tcgctgtcga ggagcgccca ttgcacggcc cggtgcgcct cgccgatccg gccgcggagt
     9181 agattctcgt taacctttcg ctgctcttgc cgcggaagaa ggcgaggcag ggcatcggga
     9241 acgcaccgca gcttcatacg ttttccgtga aagggcagcg gttgtatctc ccccgagact
     9301 gccgccctat gcccccggcg gatctctcct cccagttccg ccggggagct tatttcggcg
     9361 acgtcaccgc ctaaggaagc cgcgtgtcgc acctcgccgg catcggcgag cctcgtcctt
     9421 atcgcgccga cccacgtgcc catgccgtct ccgcgacttg gccgggcgcc ggtttacgcg
     9481 gccgttcagg cgcggttcac cccggagagc ctagggagga cgcatgcctg ccgtggcacg
     9541 a
//
LOCUS       DATMQB010000476         5014 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3079369, whole genome shotgun sequence.
ACCESSION   DATMQB010000476 DATMQB010000000
VERSION     DATMQB010000476.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 5014)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5014)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5014
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3079369"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..1059
                     /locus_tag="VNY79_13815"
     CDS             <1..1059
                     /locus_tag="VNY79_13815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011661985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX73570.1"
                     /translation="AFKSEGQRLWFERMAARGWTVPEWPKEYGGGGLSREEARVLRGE
                     MRRLGCRSPLDSFGIWMLGPALLRYGSEAQKREYLPQIARGEIRWCQGYSEPNAGSDL
                     ASLATRAEDRGDHFLVNGRKIWTSYADKADWIFCLVRTDPAASKHLGISFILFDMRTP
                     GVSTKPILLVSGNSPFCETFFDDVRVPKGQVVGELNKGWEVAKYLLTHEREMISGIGL
                     GTGRPLGQVAADALGSEAGILADTCLRADIARFEVDSAAFQFALERTGDLLKAKQANP
                     AISSMLKYYGAELNKRRHELLMTAGGSDALEWESERSRGGDAARGWLRTKANSIEGGT
                     SEVQLNVIAKRILELPGA"
     gene            1072..2211
                     /locus_tag="VNY79_13820"
     CDS             1072..2211
                     /locus_tag="VNY79_13820"
                     /EC_number="1.-.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018316835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX73571.1"
                     /translation="MALILTEEQMMVRDNARAFLADKAPVAHLRKLRDTRDADGFSRS
                     LWKAFAEMGFCGLLLPESLGGSGLGYIEGGVIMEEIGRNLTPSPFLSTALLGATALLR
                     DGNGARNEELLPKLAAGDLLLALAVDERSKHAPSATSLKAERSGNGFALSGEKCFVAD
                     GHVAVLFIVAARSAGAPGETDGLTLFLVDAKAKGIDIERTVMVDAHNAARIRLDCVEV
                     DADAVIGEVDRGWPLLEGVLNVGRAAVAAELTGLGEEAFARTLGYLKQRRQFGEPIGS
                     FQALQHRAAHLFTELEITQAAVLKALQTLDGDFDRAAPVVSVAKARAGASATLAVQEA
                     VQMHGGIGMTDELDVGLFMKRARVGQELFGDAGFHADRLARLHNY"
     gene            2260..3990
                     /locus_tag="VNY79_13825"
     CDS             2260..3990
                     /locus_tag="VNY79_13825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015931896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="class I adenylate-forming enzyme family protein"
                     /protein_id="HWX73572.1"
                     /translation="MAGAKAFPAISLAEANAALTRPGSPFEIEERTIRGVRTRVWKNA
                     PPTLRNAFLLGRGYGERTFVVYRDESASYEAFARAALTVAPALQEAGVGKGDRVAIAM
                     RNLPEWPVAFFGCLLAGGVATLLNAWWTGPELEYGLLDSGAKVAIVDRERLGRLAEHL
                     HNCPELKCVFVSREGEEVAHPKVAKLESVIGEVNSWHLLPDRPLPDVPLDPDDDATIL
                     YTSGTTGKPKGAVGTHRNACSAIVARPYSQARTFLRRGEPVPAPDPNAPQKSYLLPIP
                     LFHTTGCHAVMIPLVAGGGKLVFMHKWDPELALQIIERERITGTGGVPTIAWQLLAHP
                     ALEKYDLSSLESIGYGGAPAAAELVRRLKEKFPKSAPGFGWGMTETTSVFTGHSDEDY
                     ELRPESSGPALPVCEMKIVGEDGREIPAGGIGELWAKGPNVVRGYWRKPEATAATFVD
                     GWLRTGDIARIDEEGFLFILDRAKDMLIRGGENIYCIEVENALYEHPAVIDAAVVAIP
                     HQSLGEEPGAVVTLKHGTQASEEELRAFAAERIAAFKVPVRILLSREMLPRNPNGKIL
                     KSELKRLFVA"
     gene            complement(4045..4449)
                     /locus_tag="VNY79_13830"
     CDS             complement(4045..4449)
                     /locus_tag="VNY79_13830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system VapC family
                     toxin"
                     /protein_id="HWX73573.1"
                     /translation="MSDVLVDSSVLLDVLGGDGAWRQWSERAIASAAETARLLINPVI
                     YAEVSVRYSRIEDLDHALRPDLFTREPIPYRAAFLAGKALLLYRRRGGVRSSPLPDFF
                     IGAHAAVANYRLLTRDPRRYRAYFPSLVLIAP"
     gene            complement(4442..4678)
                     /locus_tag="VNY79_13835"
     CDS             complement(4442..4678)
                     /locus_tag="VNY79_13835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012114581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HWX73574.1"
                     /translation="MRITSKGQVTIPIAIREKAGLMPNTEVDFDFDGQYVRIRRARRK
                     KGLNRGERLIEHMRRHGGDVPMTTDEIMALTRGE"
BASE COUNT          879 a         1642 c         1667 g          826 t
ORIGIN      
        1 gccttcaagt cggaggggca gcgcctttgg ttcgaacgga tggcggcgcg cggctggacc
       61 gtgccggaat ggccgaagga atacggcggc ggcggtctct cgcgcgagga agcaagagtc
      121 ctgcgcggcg agatgcgccg cctcggctgc cgctcgccgc tcgattcgtt cggcatctgg
      181 atgctcggcc cggcgctgtt gcgctacggg agcgaagcgc agaagcgcga atacctgccg
      241 cagatcgcgc gcggcgagat ccgctggtgc caaggctact ccgagcccaa cgccggctcc
      301 gaccttgcgt cgctggcgac gcgcgccgaa gaccgcggcg accattttct cgtcaacggc
      361 cggaagatct ggacgagcta cgccgacaag gccgactgga tcttctgcct ggtacggacc
      421 gatccggcag cgtcgaagca tctcggcatc agcttcatcc tcttcgatat gcgcacgccg
      481 ggcgtgtcga ccaagccgat cctgctcgtt tccggcaatt caccgttctg cgagaccttc
      541 ttcgacgacg tgcgcgttcc caaagggcag gtcgtcggcg aactcaacaa gggctgggaa
      601 gtcgccaagt atcttttgac gcacgagcgc gaaatgatca gcggcatcgg tctcggcacg
      661 ggccgcccgc tcgggcaggt ggccgccgac gcgctcggca gcgaagccgg cattctcgcc
      721 gacacctgcc tgcgcgccga cattgcacgc ttcgaggtcg acagcgcggc ttttcagttc
      781 gctctggagc ggaccggcga ccttctcaaa gccaagcagg ccaatccggc catctcctcc
      841 atgctcaaat attacggcgc cgaattgaac aagcgccgtc atgagctgct gatgacggcg
      901 ggcggctccg atgccctcga atgggagagc gagcgttccc gcggcggcga tgcggcgcgg
      961 ggctggctgc gtaccaaggc gaactcgatc gaaggcggaa cgagcgaggt ccagctcaac
     1021 gtcatcgcca agcgcatcct cgaattgccc ggcgcctagt gcggagcgac gatggcgctg
     1081 atcctcaccg aagagcagat gatggtgcgc gacaatgcgc gcgccttcct tgccgacaag
     1141 gcgccggtcg cgcatctgcg caaattgcgc gatacgcgcg acgccgacgg attctcgcgt
     1201 tcgctgtgga aggcgttcgc ggagatggga ttttgcggcc tgctgctgcc cgaaagtttg
     1261 ggcgggtcgg ggctcggcta catcgaaggc ggcgtcatca tggaggagat cggccgcaac
     1321 ctgacgccgt cgccgtttct gtcgaccgcg cttctcggcg cgacggcgct gctgcgcgac
     1381 ggcaacggcg cccgcaacga ggagctgctg ccgaagctcg ccgccggcga cctgctgctg
     1441 gcgctcgccg tcgacgagcg cagcaagcat gcgcccagcg ccacttcgct caaagcggag
     1501 cgcagcggca acggcttcgc gctcagcggc gagaaatgct tcgtcgccga tgggcacgtt
     1561 gccgtccttt tcatcgttgc ggcgcgcagc gccggcgcgc cgggcgagac cgacggcctc
     1621 acgctctttc tcgtcgacgc caaggcgaag gggatcgaca ttgagcgcac cgtgatggtc
     1681 gatgcccaca atgcggcgcg catccgcctc gattgcgtcg aggtcgacgc cgatgccgtg
     1741 atcggcgagg tcgatcgcgg ctggccgctg ctcgaaggcg tgctcaacgt gggccgcgcc
     1801 gcggtcgccg ccgagctgac cggattgggc gaggaggcat tcgcacgcac gctcggctac
     1861 ctcaagcagc gccggcaatt cggcgagccg attggctcgt tccaggcgct gcagcaccgc
     1921 gccgcgcatc tgttcaccga actcgaaatc acgcaggccg cggtgctcaa ggcgctgcag
     1981 acgctcgatg gagatttcga tcgcgccgca ccggtggttt ccgtcgccaa ggcgcgggcg
     2041 ggagcgagcg cgacgctcgc ggtgcaggaa gccgtgcaga tgcacggcgg catcggcatg
     2101 accgacgagc tcgacgtcgg cttgttcatg aagcgcgcgc gggtcggcca ggagcttttc
     2161 ggcgacgccg gcttccacgc cgatcgcctc gcccggctgc acaattattg acgttcggct
     2221 gaagccgtgc cggcgcaggc gggtagcagg gagaacgaga tggccggcgc gaaggcattc
     2281 cccgccatct cgctcgccga ggccaatgcc gcgctgactc gtcccggctc accgttcgag
     2341 atcgaggagc gcacgatccg cggcgtgcgc acgcgcgtct ggaagaacgc gccgccgacc
     2401 ttgcgcaacg cgtttctgct cggccgcggc tacggcgagc gcacgttcgt cgtctatcgc
     2461 gacgagagcg cgagctatga ggcgttcgcg cgcgccgcgc tcaccgtcgc tccggcgctg
     2521 caggaggccg gcgtcggcaa gggcgaccgg gtcgcgatcg cgatgcgcaa ccttccggaa
     2581 tggccggtcg ccttcttcgg ctgcctgctc gccggcggcg tcgccacttt gctcaatgcc
     2641 tggtggaccg ggccggagct cgaatacggg ctcctcgatt caggcgcgaa ggtcgcgatc
     2701 gtcgatcgcg agcggctcgg gcggctggcg gaacatctcc acaattgccc cgaactgaag
     2761 tgcgtcttcg tcagccgcga gggcgaagag gtggcgcatc caaaggttgc gaagctcgaa
     2821 tccgtcatcg gcgaggtcaa ctcctggcat cttctgcccg atcggccgct gccggacgtg
     2881 ccgctcgatc cggatgacga cgccaccatt ctttacacct cgggcacgac cgggaaaccg
     2941 aagggcgcgg tcggcaccca tcgcaacgcc tgctcggcca tcgtggcacg gccgtattcg
     3001 caggcgcgaa ctttcctgcg ccgcggcgaa ccggtgcccg cgcccgatcc caacgccccg
     3061 caaaagtcct atctgctgcc gatcccgctg ttccatacga ccggatgcca cgcggtgatg
     3121 atcccgctcg tcgccggagg cggcaagctc gtgttcatgc acaaatggga cccggagctg
     3181 gcgctgcaga tcatcgaacg cgagcgcatt accggcaccg gcggcgtgcc gaccatcgcc
     3241 tggcaattgc tcgcccatcc cgcgctcgag aagtacgacc tctcctcgct cgagagcatc
     3301 ggctacggcg gagcgcccgc agccgccgag ctggtgcgca ggctgaagga gaaattcccg
     3361 aagtcggcgc ccggtttcgg ctgggggatg accgagacaa cctcggtatt caccgggcac
     3421 tcggacgaag attacgaatt gcggccggaa agcagcggtc ccgcgctgcc ggtctgcgag
     3481 atgaagatcg tcggcgagga cggccgcgag attccagcgg ggggcatcgg cgagctctgg
     3541 gccaagggcc cgaacgtcgt gcgcggctac tggcgcaagc ccgaggccac ggccgcgact
     3601 ttcgtcgacg gctggctgcg caccggcgac atcgcccgga tcgacgagga aggctttctc
     3661 ttcatcctcg accgggcgaa ggacatgctg atccgcggcg gcgagaacat ctactgcatc
     3721 gaagtggaaa acgcgctcta cgagcatccc gccgtgatcg acgccgcggt cgtcgccatc
     3781 ccgcaccaat cgctgggcga agagccgggc gcggtcgtga ccctcaagca cggcacgcag
     3841 gcgagcgagg aggagctgcg cgcctttgcc gccgaacgca tcgcggcttt caaggtgccg
     3901 gtcagaattc tcctgtcccg cgagatgctg ccgcgcaatc cgaacggcaa gattctcaag
     3961 tccgagctca agcgtctgtt tgttgcttga gacacattgg gcgtgcgcct ctcgccgcct
     4021 gctggcagcg agcgcgcgaa cgcgtcacgg cgcaatgaga acgaggctgg ggaagtacgc
     4081 ccgataacgg cgtgggtcgc gcgtcaacag tcgatagttt gccaccgccg catgcgcgcc
     4141 gatgaaaaaa tccggaagcg gcgaggagcg cacgcctccg cggcggcgat acagcaagag
     4201 cgccttcccc gctagaaacg ctgcccgata gggaattggt tcacgcgtga acagatctgg
     4261 tcgcaacgcg tgatcgaggt cctcgatgcg cgaatagcgc acggagacct ccgcatagat
     4321 gactggattg attagtaggc gtgcggtctc agcggcactc gctatcgcac gctcggacca
     4381 ttgtcgccaa gctccgtcgc cgcccaggac gtcgagaagt acgctgctgt cgacgaggac
     4441 gtcactcacc gcgcgtgagg gccatgatct cgtcggttgt cattggtacg tcgccaccat
     4501 gtcgtcgcat gtgttcaatc aatcgttccc cgcggttcaa gcctttcttg cgtcgcgcac
     4561 ggcggatacg gacgtactgg ccgtcgaagt cgaaatcgac ctcggtgttc ggcatgaggc
     4621 cggccttctc tcgtatcgcg atcgggatgg tgacttggcc cttggaggtg atgcgcatgg
     4681 gacgaatcct atttcttact tgtgaaagta agaaatcgcg ggagcttcgt caatcaccgt
     4741 ggttattgcc aaccaagtca ttggcccgcg gaccgagact tggccaaacg tggccgatgc
     4801 gagccgcgcc ccatgcttaa gcctcgcgag ctcccgtgct aagaaaaccc gcaccgaaag
     4861 cgcggaggat tggcgatggc cgaggcggcc gagaacgaaa acgaggtcgt cacggccggg
     4921 cttctcgtca tcggcgacga gatcctgtcc ggccgcacca aggacaagaa catcggctac
     4981 gtcgccgaat acctgaccgt gatcggcatc gatc
//
LOCUS       DATMQB010000477        10502 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3691224, whole genome shotgun sequence.
ACCESSION   DATMQB010000477 DATMQB010000000
VERSION     DATMQB010000477.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 10502)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10502)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10502
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3691224"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..683)
                     /locus_tag="VNY79_13840"
     CDS             complement(<1..683)
                     /locus_tag="VNY79_13840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011439438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CNNM domain-containing protein"
                     /protein_id="HWX73575.1"
                     /translation="MTIIDWLTVVAVVACLLISAFYSASETALTASSRAAMMRLEKHG
                     NRDASIVNRLLAKRERLLGAVLFSNNLTNIAASTLATGLLLAAFGHAGVIYATIVMTV
                     IIFVVCEILPKTAAFNMPDRMALWVARPVERTVLWFSPILSAVEWLVRVILHGIGMPV
                     GKIQSILSPREELRGAVDLLHRAGVVEKLDRDMMGGVLDLRELTVSDVMVHRTKIVML
                     NADDPPREIV"
     gene            complement(680..1810)
                     /gene="aroB"
                     /locus_tag="VNY79_13845"
     CDS             complement(680..1810)
                     /gene="aroB"
                     /locus_tag="VNY79_13845"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006022429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003856 - 3-dehydroquinate synthase
                     activity [Evidence IEA];
                     GO_process: GO:0009423 - chorismate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HWX73576.1"
                     /translation="MTVRSRAKPLVVDVALGDRSYDIVIGRRLMGTLGARIAALRPGA
                     KAVIVTDENVARYYLRATETALGAAGMATSGVIVPPGEASKSFQVFEEVCEAIIAARA
                     ERGDLVIALGGGVVGDLAGFAASAVRRGLDYVQVPTTLLAQVDSSVGGKTAINSTEGK
                     NLIGAFHQPILVLADTTTLDTLPAREFRAGYAEVVKYGLLGDKSFFLWLESSWRNIFE
                     GGPAREFAIETSCRAKAKIVARDERETGERALLNLGHTFGHALEAACGFSNRLLHGEA
                     VAAGMALAFAFSARRGLLPEAEAERVIRHLAEVGLPTETRHIPGGLPPADELMELIAQ
                     DKKVRRGMLTFILVRGIGAAFVEPNVDRRDVHAFLTEKLAGL"
     gene            complement(1813..2427)
                     /locus_tag="VNY79_13850"
     CDS             complement(1813..2427)
                     /locus_tag="VNY79_13850"
                     /EC_number="2.7.1.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020607901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HWX73577.1"
                     /translation="MTDIALQNDASASAAAAVVLAGLGRRSIVLVGMMGVGKSSVGRR
                     LAARLSIPFVDADTEIEKAAGMSIADIFARHGEADFRNGEARVIARLLESGPQVLATG
                     GGAFMNADTRAAMQAKAVSIWLSADFDVLMRRVSKRKSERPLLQTADPAETLRRLLAE
                     REPIYALADLSVRSRDVSHDAIVAEIMTALAAFLKPAPPPHGKA"
     gene            2565..2714
                     /locus_tag="VNY79_13855"
     CDS             2565..2714
                     /locus_tag="VNY79_13855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008144572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine kinase"
                     /protein_id="HWX73578.1"
                     /translation="MPSLFRFLAVVAILGVVVYVGLYALAHFVQPKPREITVSISPDK
                     FFKNR"
     gene            2725..3723
                     /locus_tag="VNY79_13860"
     CDS             2725..3723
                     /locus_tag="VNY79_13860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016843562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_function: GO:0009037 - tyrosine-based site-specific
                     recombinase activity [Evidence IEA];
                     GO_process: GO:0006313 - DNA transposition [Evidence IEA];
                     GO_process: GO:0007049 - cell cycle [Evidence IEA];
                     GO_process: GO:0051301 - cell division [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HWX73579.1"
                     /translation="MTRSAPRAASRAADGGAQPSDGRLIALFLDMLAAERGAAPNTLA
                     AYRRDLADFASYLAGGGATVKSATTEDVRRYLGALARRGLRPASVARRLSAIRQLYRF
                     LYAERQRKDDPAAVLEGPKRTRPLPKTLSLAEVDRLLGFAARCDLAAALSERVRAARL
                     ACLVELLYATGLRVSELVALPIAAARRDARVVVVRGKGNKERLVPLNDAAKRSMVEYL
                     ALRAEAEGGGGAVVAARSKWLFPSFGGSGHLTRQHFARELKALAAAAGLRAAQVSPHV
                     LRHAFASHLLHNGADLRVVQTLLGHADISTTQIYTHVLDERLKSLVRDLHPLAGEN"
     gene            3867..4823
                     /locus_tag="VNY79_13865"
     CDS             3867..4823
                     /locus_tag="VNY79_13865"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009798630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009317 - acetyl-CoA carboxylase complex
                     [Evidence IEA];
                     GO_function: GO:0003989 - acetyl-CoA carboxylase activity
                     [Evidence IEA];
                     GO_process: GO:0006633 - fatty acid biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HWX73580.1"
                     /translation="MRSYLDFEKPVAELEAKIEELRALEAEGDSVAIDEEITRIEGKA
                     AQALKELYAELTPWQKTQVARHPQRPHCLDYITRLIADFVPLAGDRKYGEDAAIVGGF
                     GRFRGESVCIIGHEKGSDTDSRLRHNFGMARPEGYRKAARLMDMADHFEIPVIALIDT
                     AGAYPGIGAEERGQAEAIARSTEACLRVGVPNVAAIIGEGGSGGAIAVATANRVMMLE
                     HAIYSVISPEGAASILWRDTAKAQEAASSMKITAQDLLRFGVIDTIIPEPTGGAHRDP
                     AAAVTATAEAIAAALADLQGLDRATIVRLRREKFMAIGRALG"
     gene            5094..6668
                     /locus_tag="VNY79_13870"
     CDS             5094..6668
                     /locus_tag="VNY79_13870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016740 - transferase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="L,D-transpeptidase family protein"
                     /protein_id="HWX73581.1"
                     /translation="MIRASPVRARLCRALLASALLAGSLGLAGCNTDIYQLPTRAMKE
                     LSPEMLALLGQKGMPRESPILVRIFKEESELEVWKQDTTGRFEMLKVYPICRWSGELG
                     PKVREGDRQAPEGFYTITPALMNPNSSYYLAINTGFPNAYDRANGRSGAFLMIHGDCS
                     SRGCYAMTDEQIGEIYSLARESFLGGQQSFQIQAYPFRMTAANLARHRTNPNMPFWRM
                     IKEGNDHFEVTHMEPKVDVCDRRYVFDAQPPANSAKPLAFNPTGHCPAFEVSPQLAAL
                     ARDKEQHDEAQFTQLATFNAPVAPIKTGTDGGSNRVFIAQIENSSRTVDSEGHVHVVL
                     PPAGSVPETTGAVADNSAPQPSLASRLFGGIFGSKNSGDSTRVASADASAGTQERSGG
                     FFRNLFSSRSSGSSSQQANPAGAARAPESPAGAAAASQKSKPATHSDTHTEVAAAPAG
                     VRAKPRIEAEASAPQRAEPQPQKMEPQETVASKPKPAAQQEANAAAPGSSGAMLSGAQ
                     RAVPAGSFESRWTGMQ"
     gene            complement(6734..9580)
                     /gene="secA"
                     /locus_tag="VNY79_13875"
     CDS             complement(6734..9580)
                     /gene="secA"
                     /locus_tag="VNY79_13875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013167582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006605 - protein targeting [Evidence IEA];
                     GO_process: GO:0006886 - intracellular protein transport
                     [Evidence IEA];
                     GO_process: GO:0017038 - protein import [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HWX73582.1"
                     /translation="MIGGVARKLFGSANDRRIRSYRPRVEEINALEKDLEQLSDEALR
                     ARTDMFKKQIAEGQTLDNILVPAFATVREAGKRTLGQRHFDVQLIGGMVLHEGKISEM
                     KTGEGKTLVATLPVYLNALGGRGVHVVTVNDYLAKRDAEWMGQIYKFLGLTVGVIVHG
                     LDDEERKKQYDCDVTYGTNNELGFDYLRDNMKYRLEDMVQRGHVYAIVDEVDSILIDE
                     ARTPLIISGPLDDRSEFYNTIDAYIPRLEKTDYEVDEKQRTVTLTEAGMERLEQWLRD
                     NGLLKSDSLYDVENVSVVHHVNQAMRAHKLFARDKDYIVRNGEVVIIDEFTGRMMPGR
                     RYSEGLHQALEAKEHQPIQPENQTLASITFQNYFRMYEKLAGMTGTAVTEADEFMDIY
                     NLEVLEIPTNMPMIRLDDDDEVYRTAAEKFRAILALIEDCKTRGQPVLVGTTSIEKSE
                     QLAEMLRKQGWEQHDFSDPNAFAALYSGDEGASKAKVFAILNARYHEQEAYIVAQAGV
                     PGAITIATNMAGRGTDIQLGGNADMRIRQELAAIEDFKERERSPGANEIRAQVARLKE
                     KAIGAGGLYVLGTERHESRRIDNQLRGRSGRQGDPGHSKFFLSLEDDLMRIFGTDKLD
                     GMLQKLGLKENEAIIHPWINKALEKAQQKVEARNFDIRKNILKFDNVMNDQRKVVFDQ
                     RVEWMSDEATAEIVADMRHNVIDDLVAKHVPENAYPEQWDTAGLKEELKRVLSLDLPV
                     DEWGREEGIADEEIFTRVERRADEHMAAKVAQWGPDVVRYIEKSILLQTLDHLWREHL
                     VMLDHLRQVIGLRGYGQRDPLNEYKAEAFSLFEAMSQSLREAVTAQLMRIEIVAAPPP
                     DQQPAPLPVMEAHKMDPTTGEDEMALAMAGAETLARHGIGPAAGGAAPAAARNAEAPA
                     RNPKDPTSWGKVGRNEPCPCGSGKKFKHCHGRYV"
     gene            9889..>10502
                     /locus_tag="VNY79_13880"
     CDS             9889..>10502
                     /locus_tag="VNY79_13880"
                     /inference="COORDINATES: protein motif:HMM:NF025002.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HWX73583.1"
                     /translation="MAGTRLFVCCALGALVIAALLMPPIAAPRAEDSDQVVARANGVD
                     IRQSDLAYAEEEIGTNMPNIPPQQKRDYLITYLADVVVLSQSAEQQKLGERPEVKRRL
                     AFDRNRLLMEALLQDAGKASLSDEAEHKVYEEAIKQMASEEEVHARHILLPTEDEAKA
                     VLAELKKGADFAALAKEKSKDPGGSEGGDLGYFTKDQMVPEFSAV"
BASE COUNT         1758 a         3447 c         3454 g         1843 t
ORIGIN      
        1 acgatctcgc gcggcggatc gtcggcgttg agcatcacga tcttggtgcg atggaccatc
       61 acatccgaga cggtcagctc gcgcagatcg agcacgccgc ccatcatgtc gcggtcgagc
      121 ttctcgacga cgccggcccg gtgcaggaga tcgacggccc cgcgcagctc ctcgcgcggc
      181 gagaggatgg attggatttt gccgaccggc atgccgatgc cgtggagaat gacccgcacc
      241 agccattcga ccgcgctcag gatcggcgaa aaccagagca cggttcgctc gaccggacgg
      301 gcgacccaga gcgccatgcg gtcgggcatg ttgaaggcgg cggtcttcgg caggatctcg
      361 cagacgacga agatgatcac agtcatcacg atcgtggcgt agatcacgcc ggcatggccg
      421 aaagccgcga gcagcaagcc ggtcgccaat gtggaagcgg cgatgttggt caggttgttg
      481 gagaacaaga cggcgccgag cagccgctcg cgcttggcca atagccggtt gacgatgctc
      541 gcgtcgcggt tgccgtgttt ctcgagccgc atcatggcgg cgcgcgagga agcggtcagc
      601 gccgtctcgc tggcggaata gaatgcggat atcagcaggc aagctacgac cgccaccacg
      661 gtcagccaat cgatgatagt catagccccg caagcttctc ggtgaggaat gcgtgcacgt
      721 cgcgccgatc gacgttgggc tcgacgaatg cggcgccgat cccgcggaca aggatgaatg
      781 taagcattcc gcgccttact ttcttgtcct gggcgatcag ctccatcagt tcatcggcgg
      841 ggggcagtcc gccgggaatg tgtctcgtct cggtcggcaa gccgacttcg gcgagatgac
      901 ggatcacgcg ttccgcttcg gcttcgggca ggagcccgcg ccgcgccgaa aacgcgaagg
      961 cgagcgccat gccggcggcg acggcctcgc catgcagcag ccggttggag aagccgcagg
     1021 ccgcctcgag cgcgtggccg aaggtgtggc cgagattgag cagcgctcgc tcgccggtct
     1081 cgcgctcgtc gcgcgcgacg atcttggcct tggcgcgaca gctggtctcg attgcaaatt
     1141 cacgcgccgg accgccttcg aagatgttgc gccaggacga ttccagccag aggaaaaacg
     1201 acttgtcccc gagcaggccg tacttgacca cttcggcgta gccggcgcgg aattcgcgcg
     1261 ccggcaaggt gtcgagcgtc gtcgtgtcgg cgagcaccag gatcggctga tgaaaagcgc
     1321 cgatcaggtt cttgccctcg gtagaattga tcgcggtctt gccgccgacc gaggaatcga
     1381 cctgcgccag gagcgtggtc gggacctgca cgtagtcgag gccgcggcgt accgcggagg
     1441 cggcgaagcc ggcaaggtcg ccgacgacgc cgccgccgag cgcaatgaca agatcgccgc
     1501 gttcggcgcg cgcggcgatg atggcctcgc agacttcctc gaacacctga aagctcttcg
     1561 aggcttcccc tggcggcacg atgacgccgc tcgtcgccat gccggcagcg ccaagtgcgg
     1621 tctccgtggc gcgcagatag tatcgcgcga cgttctcgtc ggtgacgatg accgccttcg
     1681 ctcccggccg cagcgcggcg atgcgggcgc cgagcgtgcc catcagccgg cggccgatga
     1741 cgatgtcgta gctgcggtcg ccgagcgcga cgtcgacgac caggggtttc gcgcggctgc
     1801 gcacggtcat ggtcaggctt tcccgtgcgg cggcggagcg ggcttcagaa acgccgcaag
     1861 cgcggtcatg atctccgcca cgatcgcatc gtgcgacacg tcgcgcgacc ttacgctcag
     1921 gtcggccaaa gcatagatcg gctcgcgctc ggcgagcagg cggcgaagcg tctcggccgg
     1981 atccgcggtc tgcagcagcg gccgctcgct cttacgcttg ctgacccgcc gcatcagtac
     2041 gtcgaaatcg gcgctgagcc agatggaaac cgccttcgcc tgcatggcgg cgcgcgtgtc
     2101 ggcgttcatg aaggcgccgc cgccggtcgc cagcacctgc gggccgctct cgagcagccg
     2161 agcgatcacg cgcgcctcgc cattgcggaa gtccgcctcg ccatgacggg cgaaaatgtc
     2221 ggcgatgctc attccggcag ccttctcgat ctccgtgtcg gcatcgacga aggggatgga
     2281 cagccgcgcc gcgagccgcc ggccgaccga ggattttccg acccccatca tgccgacgag
     2341 cacgatcgag cggcgtccca gcccggcgag gacaacggcc gccgccgccg aggcgctggc
     2401 gtcattttgt aaagcaatat cagtcatggt cccttcgtgc cggcaaacgt gcctcgggcg
     2461 tctccagtgc gccggaccgc ccggacggct tgccaggccg ggccgaacat gatcgtactc
     2521 ggcccgttcg ccgtcaccaa taggacgagc gcgagcgccg cacgatgccg agcctgtttc
     2581 ggttccttgc cgtcgtcgca attctcggtg tggtcgtcta tgtcggcctc tatgcgctcg
     2641 cgcatttcgt gcagccaaaa ccgcgcgaga tcaccgtctc gatttcaccc gacaaattct
     2701 tcaagaaccg ctgaggcgcc ggcgatgact cgttcggcac ctcgtgcagc gtcgcgtgcg
     2761 gccgacggcg gggcgcagcc gtcggacggc aggctgattg cgctttttct cgacatgctg
     2821 gcggcggaac gcggggccgc gcccaacacg ctggcggcgt atcgccgcga ccttgcggac
     2881 tttgcctcct acctcgcggg cggcggcgct accgtcaagt cggcgacgac cgaggatgtg
     2941 cgccgctatc tcggcgcgct cgcgcgacgc ggattgcggc cggcgtcggt ggcccgccgc
     3001 ctctcggcga tccgccagct ctaccgcttc ctctacgccg agcggcagcg caaggacgac
     3061 cccgccgccg tgctcgaagg cccgaagcgt acccgcccgc tgccgaagac tctcagcctc
     3121 gccgaggtcg accggctgct gggtttcgcc gcacggtgcg acctggcggc ggcgctgagc
     3181 gagcgggtgc gcgccgcccg gctcgcctgc ctggtcgaac tcctttatgc caccggtctg
     3241 cgtgtctccg aactcgtcgc cctgccgatt gcggcggcgc gccgggacgc ccgcgtcgtc
     3301 gtcgtgcgcg gcaaggggaa caaggaacgc ctggtgccgc tcaacgatgc ggccaagcgc
     3361 tcgatggtgg aatacctcgc actgcgcgcc gaggccgagg gcggcggcgg cgccgtcgtg
     3421 gcggcacgat cgaaatggct gttcccctca ttcggcggca gcggccatct cactcgccag
     3481 cactttgccc gcgagctcaa ggcgctggcg gcggccgccg gactgcgagc ggcgcaggtg
     3541 agcccgcacg tgctgcgcca cgccttcgcc agccacctcc tccacaacgg cgccgacctg
     3601 cgcgtggtgc agacgctgct tgggcacgcc gacatttcca cgacccagat ctacactcac
     3661 gtcctcgacg agcgcctgaa aagcctagtg cgcgatctgc acccattggc gggtgaaaat
     3721 tgaggacgcc acatatattt cgacgctcgg aagtcggcca agaagggcct gttggcagtt
     3781 cggcgttcct tgacttgaat gcgccgcgcg ggtgagtttg ccgcccccac gcaacgcggt
     3841 tgatctgcga cgcaattatt tggccaatgc gctcttatct cgactttgag aaaccggtgg
     3901 ccgagctcga ggccaaaatc gaggagctgc gcgcgctcga ggccgagggc gactctgttg
     3961 ccatcgacga ggagatcacc cgcatcgaag gcaaggcggc gcaggcgctc aaggaactct
     4021 acgccgagct gacaccctgg cagaagaccc aggtcgcccg ccatccgcag cggccgcatt
     4081 gcctcgacta catcaccagg ctcatcgccg atttcgtccc gctggccggc gatcgcaaat
     4141 acggcgagga cgcggcgatc gtcggcggct tcgggcgctt ccgcggcgag agcgtctgca
     4201 tcatcggcca cgagaagggt tcggacaccg acagccgcct caggcacaat ttcggcatgg
     4261 cgcggccgga aggctaccgc aaggcggccc gcctcatgga catggccgac cacttcgaaa
     4321 ttccggtcat cgccctgatc gacaccgccg gcgcctatcc cggcatcgga gcggaagagc
     4381 gcggccaagc cgaggccatt gcgcgctcga cggaggcttg cctgcgcgtc ggcgtgccca
     4441 acgtcgccgc catcatcggc gagggcggct cgggcggcgc catcgccgtg gcgaccgcca
     4501 accgcgtgat gatgctcgag cacgcgatct acagcgtgat atcgcctgag ggcgcagcct
     4561 cgattctctg gcgcgacacc gcaaaggcgc aggaggcggc ctcgagcatg aagatcaccg
     4621 cccaggatct gctgcgattt ggcgtgatcg ataccatcat cccggagccg accggcggcg
     4681 cgcatcgtga cccggcggca gccgtcaccg cgactgccga ggcgatcgcc gccgctctgg
     4741 ccgacctgca gggtctcgac cgggcgacga tcgttcggct ccggcgggag aaattcatgg
     4801 cgatcgggcg cgccctcggc tgaccttcag gctggagcac cctcacgggc ccttgagccg
     4861 ccgggcttcc gcggcgccaa tcctaggcgc caggacgctg tccgctgccg gtcaaagtcg
     4921 ataagtcgtt gtccctgccg gtcaaattct cggaaaattt aaccattcgt tcagtaccgg
     4981 cgtggtcaac cggtctgcag gggcctgggc tgccttgcga aagccacttc ttaaggataa
     5041 cgataggcca gagtgatggc acggggatgg tccatcagtc ggggagtatc gcattgatcc
     5101 gcgccagccc agttcgcgcg cgactttgcc gtgccctttt agcatcggcg ttactcgccg
     5161 gttcgctggg gctcgccggc tgcaacaccg acatttatca gcttccgacc cgcgcgatga
     5221 aggaattgtc gccggagatg ctggccctgc tcgggcaaaa gggcatgccc agagagtcgc
     5281 cgatcctcgt ccgaatcttc aaggaggaat cggaactcga ggtttggaag caggacacta
     5341 ccggccgctt cgaaatgctc aaggtgtacc cgatctgccg ctggtcgggt gagctcgggc
     5401 cgaaggtaag ggaaggcgac cgccaggcgc ccgagggctt ctatacgatc acgccggcgc
     5461 tgatgaatcc caactccagc tattacctcg caatcaatac gggcttcccg aacgcgtacg
     5521 acagggcgaa cggacgcagc ggcgcattcc tgatgatcca tggcgactgc tcctcgcgcg
     5581 gctgttacgc aatgaccgac gagcagatcg gcgagatcta ttcgctcgcg cgcgagtcct
     5641 tcctcggcgg gcagcagtcg ttccagatcc aggcttatcc gttccgcatg accgcggcta
     5701 acctcgcacg gcaccgcact aacccgaaca tgccgttctg gagaatgatc aaggagggca
     5761 acgatcattt cgaagtgacg catatggagc ccaaggtcga cgtgtgcgac cgccgctacg
     5821 tgtttgacgc ccagcccccg gccaattctg ccaaaccgct tgccttcaat cccaccggtc
     5881 attgcccggc gttcgaagtt tccccgcagc tcgccgcgct ggcccgggac aaggagcagc
     5941 acgacgaggc gcagttcacg caattggcca cgttcaacgc tccggtggcg ccgatcaaaa
     6001 cgggtacgga cggcggctca aacagggtct tcattgccca gatcgagaat tccagccgga
     6061 cggtcgacag cgaagggcac gtgcacgtgg ttctgccgcc ggcaggctcc gtgccggaga
     6121 cgaccggcgc ggtggcggac aacagtgccc cgcagccttc gctcgccagc cggctattcg
     6181 gcgggatatt cggttccaag aactcgggcg attccacccg cgtcgcttcg gctgacgcga
     6241 gcgcagggac acaggagcgt agcggcggct tcttccgcaa tttgttctca tcccgcagca
     6301 gcggcagtag ctcgcagcag gcaaacccgg cgggggcagc ccgtgcgccg gagtcgccgg
     6361 cgggcgcggc ggcggcatca cagaaatcga aacccgccac ccatagcgac acccataccg
     6421 aggttgctgc cgcgccggcc ggcgtgcgcg ccaaaccgag gatcgaagcc gaggcgtcgg
     6481 cgccgcaaag ggccgagccg cagccgcaaa agatggagcc gcaggaaacc gtggcgtcaa
     6541 agcctaaacc tgctgctcag caggaggcca acgcggctgc accgggaagc agcggcgcca
     6601 tgctcagcgg cgcccaacgc gccgtgcccg ccggcagctt cgagagccgc tggaccggga
     6661 tgcaatagcc ggagcactca cggcagagga cgggtgcctt atcggtcttc cgtcatctgg
     6721 cctgtgttgt ccgctaaacg taccgcccgt ggcaatgctt gaatttcttg cctgagccgc
     6781 aagggcaggg ctcgttgcgg ccgaccttcc cccagctcgt cgggtccttc ggatttcgcg
     6841 ccggtgcctc ggcgttgcgc gcagcggcag gcgcagcgcc gcccgcggca gggccaatgc
     6901 cgtggcgcgc cagcgtttcc gcgccggcca tcgccaaggc catctcgtct tcgccggtcg
     6961 tcggatccat cttgtgcgct tccatgaccg gcagcggcgc cggctgctga tccggcggcg
     7021 gcgcagccac gatctcgatg cgcatgagct gcgcggtcac cgcctcgcgc aggctctgac
     7081 tcatcgcttc gaacaggctg aaggcctcgg ccttgtactc gttgagcggg tcgcgctgcc
     7141 cgtagccgcg cagcccgatc acctggcgca gatggtcgag catcaccagg tgctcgcgcc
     7201 acagatggtc gagcgtctgc agcaggatcg acttctcgat gtagcggacg acgtcggggc
     7261 cccattgcgc gacctttgcc gccatgtgct cgtcggcgcg gcgctcgacg cgcgtgaaaa
     7321 tctcctcgtc ggcgatgccc tcttctctgc cccattcgtc gaccggcagg tcgaggctca
     7381 gcacgcgctt gagctcctcc ttgagacccg ccgtatccca ctgctccgga taggcgttct
     7441 ccggaacgtg cttggcgacc agatcgtcga tcacgttgtg gcgcatgtcg gcgacgatct
     7501 ctgcggtcgc ctcgtcgctc atccattcga cgcgctggtc gaagacgacc ttgcgctggt
     7561 cgttcatcac gttgtcgaac ttgaggatgt tcttgcggat atcgaagttg cgcgcctcga
     7621 ccttctgctg cgccttctcc agcgccttgt tgatccaggg atggatgatc gcctcgttct
     7681 ccttgaggcc aagcttctgc agcatgccgt cgagcttgtc ggtgccgaag atgcgcatca
     7741 ggtcatcttc gagggagagg aagaatttgg agtggccggg gtcgccctgg cgcccggaac
     7801 ggccgcgcaa ctggttgtcg atgcggcggc tctcgtgccg ctcggtgccg agcacgtaga
     7861 ggccgccggc gccgatcgcc ttttccttca agcgcgccac ctgggctcgg atctcgttgg
     7921 cgcccggact tctctcgcgc tctttgaagt cctcgatggc ggccagctcc tgccggatgc
     7981 gcatgtcggc gttgccgccg agctgaatgt cggtgccgcg gcccgccatg ttggtggcga
     8041 tggtgatggc gccgggcacg ccggcctggg cgacgatata ggcctcctgc tcgtgatagc
     8101 gggcgttgag gatggcgaac accttggcct tggaggcgcc ctcgtcgccg gaatagagcg
     8161 cagcgaaggc gttgggatcg gagaagtcgt gctgctccca gccctgcttg cgcagcatct
     8221 ccgcaagctg ctccgacttc tcgatcgacg tggtgccgac caataccggc tggccgcgcg
     8281 tcttgcagtc ttcgatcagc gccaggatcg cccggaattt ctccgccgcg gtgcgataga
     8341 cctcgtcatc gtcgtcgagg cggatcatcg gcatgttggt cggaatttcc aggacttcaa
     8401 ggttgtagat gtccatgaac tcgtcggcct cggtcacggc cgtgccggtc atgccggcga
     8461 gcttctcgta catgcggaaa tagttctgga acgtgatcga agcgagcgtc tggttctcgg
     8521 gctggatcgg ctgatgctcc ttggcctcga gcgcctggtg cagcccttcg gaatagcgcc
     8581 ggcccggcat catgcggccg gtgaactcgt cgatgatgac gacctcgccg ttcctgacga
     8641 tgtagtcctt gtcgcgggca aacagcttgt gcgcgcgcat cgcctggttg acgtgatgga
     8701 cgacggacac gttctcgacg tcgtagagcg agtcggactt gagcaggccg ttgtcgcgca
     8761 gccattgctc cagccgctcc atgccggctt cggtgagcgt gacggtgcgc tgcttctcgt
     8821 cgacctcgta gtcggtcttt tcgagcctcg ggatgtaggc atcaatggtg ttgtagaact
     8881 cggagcggtc gtcgagcgga ccggagatga tcagcggcgt gcgcgcctcg tcgatcagga
     8941 tcgagtcgac ctcatcgaca atggcgtaga catggccgcg ttgcaccatg tcctcgagcc
     9001 ggtacttcat gttgtcgcgc aggtagtcga agccgagctc gttgttggtg ccgtaggtga
     9061 cgtcgcagtc gtattgcttc ttgcgctcct cgtcgtcgag cccgtggacg atgacgccga
     9121 ccgtgagccc gaggaacttg tagatctgcc ccatccattc ggcgtcgcgc ttggccagat
     9181 agtcgttgac ggtgacgacg tggacgccgc gtccgccgag cgcattgaga tagaccggaa
     9241 gggtggcgac cagcgtcttg ccttcgccgg tcttcatctc ggagatcttg ccttcgtgca
     9301 gcaccatgcc gccgatcagc tggacatcga aatggcgctg gccgagcgtg cgcttgccgg
     9361 cttcgcgcac ggtggcgaat gccggcacga ggatgttgtc aagcgtctgg ccctcggcga
     9421 tctgcttctt gaacatgtcg gtgcgcgcgc gcagcgcctc gtcggagagc tgctctaggt
     9481 ccttctccag cgcgttgatt tcctccacgc gcggccgata ggagcggatg cgccggtcgt
     9541 tggcggaacc gaacagcttg cgggccacac cgccgatcat tgcgtcatcc ttccaaatgg
     9601 ggcgctgcgc cacaggcttc cgtgcccgcg cggtttcccg cggtcagcgc aagtccgacc
     9661 gccggaaaat gcggcactat tggggcttct gcaggacgac atgggacgcc tggatatcgg
     9721 ccgagacata ggagggggtc gttttcttgt caatgcaagg cggctcttca cgcgctcgtt
     9781 aagacggtgc cgcgaatccg ccattgccaa gcgcagatga ttcggcgagt gtccgcggca
     9841 gaattcgcct tcgcaaggcg ccacctctgt cttccaagga acgcattcat ggctggtacc
     9901 cgcttgttcg tctgctgcgc gctcggcgcg ctggtgattg ccgcattgct gatgccgccg
     9961 atcgccgcgc cgcgagcgga agattccgat caggtcgtcg cccgcgccaa cggcgtcgat
    10021 atccgccaga gcgacctcgc ttatgccgag gaggaaatcg gcaccaacat gccgaacata
    10081 ccgccgcagc agaagcgcga ttatctcatc acctatctcg ccgatgtggt cgtgctatcg
    10141 cagtcggccg agcagcaaaa gctcggcgag cgtccggagg tcaagcgccg gctggcgttc
    10201 gaccgcaacc ggctgctcat ggaagcgctg ctgcaggacg cgggcaaggc ctcgctgtcg
    10261 gatgaggcgg agcacaaggt ctacgaagaa gcgatcaagc agatggccag cgaggaggag
    10321 gtgcatgcgc gccacatcct ccttccgacc gaggacgaag ccaaggccgt gctcgcggaa
    10381 ctgaagaagg gcgcggattt cgccgcgctg gccaaggaga agtcgaagga tccgggcggg
    10441 tcggagggcg gcgatctcgg ctatttcacc aaggaccaga tggtgccgga gttctccgcg
    10501 gt
//
LOCUS       DATMQB010000478         9459 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2425410, whole genome shotgun sequence.
ACCESSION   DATMQB010000478 DATMQB010000000
VERSION     DATMQB010000478.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 9459)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9459)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9459
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2425410"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1070)
                     /locus_tag="VNY79_13885"
     CDS             complement(<1..1070)
                     /locus_tag="VNY79_13885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009467584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX73584.1"
                     /translation="MLYREVGQYKTNYAADMAVFPILQDRIGIAVILLVAFVVIPLIG
                     HDFLLNTVLIPFLIFSLAAIGLNLLTGYAGLLSLGTGAFMGVGAYACLKLTTIFPHVN
                     IVIWILASGLFSAAVGALFGLPSLRIKGFYLAVATLAAQFFLEWCFIRVPWLFNYSVS
                     GAIEVPLRKLAGVPITGPTATSLTRYLVVLSIVVMMTWFASNLVHGRIGRMWMSVRDM
                     DLAAELVGIRLLRTKLLAFAVSSFYCGVAGAMMVFLWYGGAEADVFAIDQSFLVLFMV
                     IIGGLGTLIGSFFGAALIYILPIALRAIPQAFGLPIRPAAAEQLTFVIVGVLIIVFLI
                     LEPNGLARLWQIGKQKLRVWPFP"
     gene            complement(1073..2029)
                     /locus_tag="VNY79_13890"
     CDS             complement(1073..2029)
                     /locus_tag="VNY79_13890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019404290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA];
                     GO_process: GO:0015803 - branched-chain amino acid
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid ABC transporter
                     permease"
                     /protein_id="HWX73585.1"
                     /translation="MDLLYKIFIDPFVQMGTAPDLLVQTLWDGLVSGVLYSLIALGFV
                     LIFKASGVFNFAQGIMVVFAALTLVGLHQHGVPAFLALGLTVVVMFLLALGVERLILR
                     PLVNQSDIILFMATFGLTYLLIGLGQLVFGGDPKVMIAEELYLPRGAIEFKGLGGFVS
                     LQKIDIAAAIIASIMVAVLAVFFQRTRIGRALRAVADSHQAALSVGISLEQIWVIVWF
                     TAGVVALTTGIMWGARSEVSFSLQIIALKALPVLILGGFTSIPGAIIGGLIIGIGEKL
                     GEFYWGPLLGGGIESWLAYVIALGFLVVRPQGLFGEKIIERI"
     gene            complement(2096..2908)
                     /locus_tag="VNY79_13895"
     CDS             complement(2096..2908)
                     /locus_tag="VNY79_13895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016840292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_function: GO:0016887 - ATP hydrolysis activity
                     [Evidence IEA];
                     GO_function: GO:0042626 - ATPase-coupled transmembrane
                     transporter activity [Evidence IEA];
                     GO_function: GO:0140359 - ABC-type transporter activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73586.1"
                     /translation="MRAPSSRDAALGEVLLAVEDVSLSFGGVRALTGVSFDIRKGEIR
                     AIIGPNGAGKTSMLNVINGFYQPQSGRITFKGEVRTSMRPYAAAHGGIARTFQNLALF
                     RGMTTLDNIMAGRTLKMHRGFFWQLLRYGPALNEEVEHRKRVEEIIDFLEIAAIRKIP
                     VGRLPYGLQKRVELGRALAMEPDLLLLDEPMAGMNLEEKEDMSRFIIDVNQQYGTTIA
                     LIEHDIGVVMDLSDRVVVLDYGQKIADATPDEVKSDKNVIRAYLGEPHGTSV"
     gene            complement(2905..4860)
                     /locus_tag="VNY79_13900"
     CDS             complement(2905..4860)
                     /locus_tag="VNY79_13900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008835246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AMP-binding protein"
                     /protein_id="HWX73587.1"
                     /translation="MDTLPKLLIHNAASIGARPAMRQKDLGVWQAWTWQQVLEEVRAF
                     SVGLAELGLKRGDKFTIIGSNRPRLYWAICAGQALGAVPVPVYADAVADEMAYVLAHA
                     EVMLAVVEDQEQVDKVIAISDRLSQLGRVIYDEPRGLKDYDHGRLIALTDVQDIGRKK
                     LASDPECLRRWEAGIAAGKGSDLSIILYTSGTTGRSKGVMLTYENTIISARNANAFDR
                     LGHEEEVIAYLPLAWVGDYFFSYVQAYAAGYCVNCPETPDTVVQDRREIGTTYAFAPP
                     RVYENVLTLTTVRMADAGPLKRRMFDFFLGVAGRWGEKILDGEKVPLGARLLYGLGNL
                     LVYGPLMNQFGLSRIRVAYTAGEAIGPEMFRFWRGMGLNLKQLYGQTEASIYITAQSD
                     GEIFSDTVGKASPDVEVKISDSGEVLFRSPGVFAGYYKDPVKTAEVLTPDGWVRTGDA
                     GFFDPKSGQLKIIDRAKDVGHLKDGTVFAPKYIENKLKFYPNIREAVALGAGRDFVCA
                     MINIDLTAVGSWAERNNVVYGSYQELAGNARVYEIIARHVEEVNRSLSEEEVMAGAQI
                     RRFLILHKELDADDGELTRTQKLRRGHITERYAPLIEAFYDGSAAADISTEVTFEDGH
                     KGVIAARVTIRDMRTFPVPAARMERAA"
     gene            5173..6339
                     /locus_tag="VNY79_13905"
     CDS             5173..6339
                     /locus_tag="VNY79_13905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016627 - oxidoreductase activity, acting
                     on the CH-CH group of donors [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA dehydrogenase family protein"
                     /protein_id="HWX73588.1"
                     /translation="MLDPSTGVIPQFSLGQDQVALRDMARAFAAEVFAPHAIEWDEAK
                     HFPVAEMRKAAALGMGGVYIAEDVGGSALSRLDAALIFEALATGCPTVTAYMSIHNMS
                     AWMIDAYGSEAQRRQWLPRLCTMELLASYCLTEPGAGSDAAALATRAVREGDDYVLNG
                     QKQFISGAGAGDLYVVMARTGGSGAAGISTFIVPGDSAGISLGANERKMGWNAQPTRA
                     VVFEDVRVPVANRLGVEGIGFKIAMTGLDGGRLNIAACSLGGAQSALEKALAYMKERR
                     AFGKRLDEFQALQFRLADMATGLEASRTFLWRAAAALDAKEANATELCAMAKRFVTDT
                     CFEIANQALQLHGGYGYLAEFGIEKIVRDLRVHQILEGTNEIMRLIVARSLVGR"
     gene            6336..7403
                     /locus_tag="VNY79_13910"
     CDS             6336..7403
                     /locus_tag="VNY79_13910"
                     /EC_number="3.1.2.-"
                     /inference="COORDINATES: protein motif:HMM:NF004127.0"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase/isomerase family protein"
                     /protein_id="HWX73589.1"
                     /translation="MSATLLQDGDVLVREERALRRLTLNRPTALNALTLDMAVTMTAL
                     LRAWAGDRKVGAVLIDGAGERGLCAGGDIRALYDAAKANSDLPARFWSSEYHLDVLIA
                     RYPKPVIAVMDGVVMGGGVGVSAHAAHRIVTERSAIAMPEVGIGYFPDVGISFPLARA
                     PGHVGTHLELTGDRLGAADAVYCGLADIHVPAAHLAELPAALADCRTAADVQTRLKEM
                     SAIPSPGRMAAARPWIDDCYSANDVEEIIARLRACDTDGARSALASLEKVSPTSLKIA
                     LRNLRSAASFQRVEESFQQDYRISLACIAGHDFIEGIRAAIVDKDRNPAWRPDQLADV
                     TPEIVDRHFRSIGALELAFPH"
     gene            7400..8302
                     /gene="mmsB"
                     /locus_tag="VNY79_13915"
     CDS             7400..8302
                     /gene="mmsB"
                     /locus_tag="VNY79_13915"
                     /EC_number="1.1.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008442 - 3-hydroxyisobutyrate
                     dehydrogenase activity [Evidence IEA];
                     GO_process: GO:0006574 - valine catabolic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyisobutyrate dehydrogenase"
                     /protein_id="HWX73590.1"
                     /translation="MNKRRTQMATIGLIGLGNMGAPMAANLVKAGERVLGFDLMPALR
                     EAAARDGVEIVAAARQATQDSEIVVTMLPAGEHVRSVWADVLPAARKGALFIDCSTID
                     VASARAVHAMAAERGVAALDAPVSGGVGGAKAATLTFMVGGSAEAFARGKPVLERMGK
                     RVVHCGEAGNGQVAKICNNMILGVSMIAVSEAFVLGEKLGLSHQALFDVASASSGQCW
                     SLTSYCPVPGPVPASPANNSYKAGFAAALMLKDLKLAREAAQSVQANTALGAQAAEIY
                     EDFAQKGQSGADFSAIINLVRGQP"
     gene            complement(8385..9035)
                     /locus_tag="VNY79_13920"
     CDS             complement(8385..9035)
                     /locus_tag="VNY79_13920"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73591.1"
                     /translation="MPQGQRCDRKVGRAARLRATFLRAGLAVALAVAVAGLHGNVARA
                     GDDDPDESFFSKFMRGIGIKRSGVDTSGIAYGERAPLVVPPSRDLPPPGSAPAPVADW
                     PQNPVVKPHKHARGKAAPATPVPNAAASIADPNVSAAQASPESEQKSSFSPNWFNKEE
                     YAKFGSEPPRGDLTDPPTGYRTPSPEQPYGIGPDKKQAKVKKAGDGTEVEVPNRPK"
     gene            complement(9121..>9459)
                     /gene="lspA"
                     /locus_tag="VNY79_13925"
     CDS             complement(9121..>9459)
                     /gene="lspA"
                     /locus_tag="VNY79_13925"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005886 - plasma membrane [Evidence IEA];
                     GO_function: GO:0004190 - aspartic-type endopeptidase
                     activity [Evidence IEA];
                     GO_process: GO:0006508 - proteolysis [Evidence IEA];
                     GO_process: GO:0009306 - protein secretion [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HWX73592.1"
                     /translation="ISYGLFPQEGAFGQWALLAFKAVVVAFLWVWLARTRSRLAAAAL
                     GLIIGGAVGNAIDRLHWPGVMDFVLFHIETASFSFRWYVFNLADVAIVAGVVGLLYDS
                     LRAGNAAKAP"
BASE COUNT         1728 a         3085 c         3123 g         1523 t
ORIGIN      
        1 ggaaagggcc acaccctcaa cttttgttta ccgatctgcc agagccgcgc gaggccattg
       61 ggctcaagga tcaggaagac gatgatcaac acgccgacga tcacgaaggt gagctgctcg
      121 gcggccgccg ggcggatcgg cagcccgaac gcctggggaa tggcccgcag cgcaatcggc
      181 aggatgtaga tcagagcggc accgaagaac gagccgatca gggtcccgag cccgccgatg
      241 atcaccatga acagcaccag aaaactctgg tcgatggcga acacgtccgc ttcggcaccg
      301 ccgtaccaaa ggaacaccat catggcgccg gcgacgccgc aatagaacga ggaaacggcg
      361 aaggcgagga gcttggtgcg cagcaacctg atgccgacca gctcggcggc gaggtccatg
      421 tcgcgaaccg acatccacat gcggccgata cggccatgca cgaggttcga cgcgaaccaa
      481 gtcatcatga cgacgatgct cagcacgacc agatagcgcg tcagcgacgt ggcggtgggt
      541 ccggtaatcg gcaccccggc gagcttgcgc agcggcacct cgatcgcacc cgagacgctg
      601 tagttgaaca gccaggggac gcggatgaag caccactcca gaaagaactg cgcggcgagc
      661 gtcgccaccg cgagatagaa gcccttgatg cgcagcgacg gcaggccgaa cagcgcgccg
      721 acggccgcgg agaacagccc tgaggcgaga atccagatga cgatgttcac atgcgggaag
      781 atcgtcgtca gcttcaggca ggcgtaggcg ccgactccca tgaacgcacc ggtgccgagc
      841 gaaagcagac cggcatagcc cgtgagcaga ttgagcccga tcgcggcgag cgagaagatg
      901 agaaacggga tgaggacggt gttgagcagg aagtcgtggc cgatcagggg aatgacgacg
      961 aaggcgacga gcaggatgac cgctatgccg atccggtcct gcaggatcgg gaacaccgcc
     1021 atgtcggcgg cgtagttggt cttgtactgg ccgacctcgc gatagagcat ggtcagatcc
     1081 gctcgatgat cttttcgccg aacagcccct gcggccggac caccaggaag ccgagcgcga
     1141 tcacgtaggc gagccagctc tcgataccgc cgccgagcag cggaccccag tagaattcgc
     1201 cgagcttctc accgatgccg atgatcagcc cgccgatgat ggcgccgggg atcgaggtga
     1261 agccaccgag gatcagcacc ggcagcgcct tgagcgcgat gatctgcagc gagaaggaca
     1321 cctccgagcg cgcgccccac atgatgccgg tcgtcagcgc cacgacgccg gcggtgaacc
     1381 agacgatgac ccagatctgc tcgagcgaga tgccgaccga cagcgccgcc tggtggctgt
     1441 cggcgacggc gcgcaacgcc cggccgatcc gggtccgctg gaagaagacc gcgagcaccg
     1501 ccaccatgat cgaggcgatg atggcggcgg cgatgtcgat cttctgcagc gaaacaaagc
     1561 cgccgaggcc tttgaactcg atggcgccgc gcggaagata aagctcctcc gcgatcatca
     1621 ccttcggatc gccgccgaaa accaactgcc cgagcccgat aagcagatag gtcagcccga
     1681 acgttgccat gaacaatatg atgtccgact ggttgaccag cggccgcaga atcagccgct
     1741 cgacgccgag cgccagcagg aacatgacca cgacggtgag cccgagcgcg agaaaggccg
     1801 gcacgccgtg ctggtggagg ccgaccagcg tgagcgcagc gaacaccacc atgattccct
     1861 gcgcgaagtt gaacacgccg gacgccttga agatcaggac gaagccgagc gcgatcagcg
     1921 aatagaggac gccggaaacg aggccgtccc acaaagtctg caccagcaag tccggcgccg
     1981 tacccatctg cacgaatgga tcgatgaaga tcttgtagag aagatccatg cgcggcctat
     2041 ctcgtcgcgc gcacgcgagc gatccggccg cgcgccgccc atgtccgggc gatcctcata
     2101 cgcttgtccc gtgcggctcg cccagatagg cgcggatgac gttcttgtcg ctcttgacct
     2161 cgtccggcgt cgcgtcggcg atcttctgcc cgtagtcgag cacgaccacg cggtcggaga
     2221 ggtccatgac cacgccgatg tcgtgctcga tcagcgcgat ggtcgtgccg tattgctggt
     2281 tcacgtcgat gatgaagcgc gacatgtcct ccttttcttc gaggttcatg ccggccatgg
     2341 gctcgtcgag cagcaacagg tcgggctcca tggcgagagc ccggccgagc tccacccgct
     2401 tctgcaggcc atacggaaga cgccccacgg gaatcttgcg gatggccgcg atctcgagaa
     2461 agtcgatgat ctcttcgacc cgcttgcgat gctcgacttc ctcgttgagc gcggggccgt
     2521 aacgcaggag ctgccagaag aagccacggt gcatcttcag ggtgcgccca gccatgatgt
     2581 tgtcgagggt ggtcatgccg cgaaacagcg cgaggttctg gaaggtgcgg gcgatgccgc
     2641 cgtgcgccgc ggcatatggc cgcatgctgg tgcgcacctc gcccttgaag gtgatgcgcc
     2701 cggattgcgg ctggtagaag ccgttgatca cattgagcat cgacgtcttg ccggcgccgt
     2761 tggggccgat gatggcgcgg atctcgccct tgcggatgtc gaacgagacg ccggtcaggg
     2821 cgcgcacgcc gccgaacgag agtgaaacgt cctcgaccgc gagcagcacc tcgccgagcg
     2881 ccgcatcgcg cgaggacggc gctctcatgc cgcgcgctcc atcctggcgg cgggtaccgg
     2941 gaaggtccgc atgtcgcgga tcgtcacacg tgcggcaatg acgcctttgt ggccgtcctc
     3001 gaacgtcacc tcggtcgaga tgtccgccgc cgccgatcca tcatagaagg cctcgatcag
     3061 cggcgcgtat cgttcggtga tgtggccgcg gcggagcttc tgcgtgcgcg tcagctcgcc
     3121 gtcgtccgca tcgagctcct tgtgcaggat gaggaagcgg cggatctgcg cgccggccat
     3181 cacctcttcc tccgacagcg accggttcac ctcctcgacg tgccgggcga tgatctcgta
     3241 gacgcgcgca ttgcccgcga gctcctgata ggagccgtag acgacgttgt tgcgctcggc
     3301 ccagctcccc accgccgtca ggtcgatatt gatcatggcg cagacgaaat cgcgcccggc
     3361 gccgagggcc acggcctcgc ggatgttggg atagaacttg agcttgttct cgatgtattt
     3421 cggcgcgaac acggtgccgt ccttgaggtg gccgacgtcc ttggcgcggt cgatgatttt
     3481 caattgcccg ctcttcgggt cgaagaagcc ggcgtcgccg gtacgcaccc atccgtcagg
     3541 cgtgagcacc tccgcggtct tgaccggatc cttgtagtat ccggcgaaca cgccgggcga
     3601 gcggaacagt acctctccgc tgtcggagat cttgacctcg acgtcgggcg acgccttgcc
     3661 gacagtatcg gagaagatct cgccgtccga ctgcgcggtg atgtagatcg aagcctcggt
     3721 ctgcccgtag agctgcttca ggttcaatcc catcccgcgc cagaagcgaa acatttccgg
     3781 gccgatcgcc tcacccgccg tataggcaac gcggatgcgc gagaggccga actggttcat
     3841 cagcgggccg taaacgagca gattgccaag gccgtagagc aggcgggcgc cgagcggcac
     3901 cttctcgccg tcgagaatct tttcgcccca gcgcccggcg accccgagga aaaagtcgaa
     3961 cattctgcgc ttgagcggac cagcatccgc catccgcacc gtggtcaacg tcagaacgtt
     4021 ctcgtagacg cggggcggcg cgaacgcgta ggtcgtgccg atctcgcgcc gatcctgcac
     4081 gaccgtatca ggcgtttccg gacagttgac gcagtagccg gctgcatagg cttggacgta
     4141 cgaaaagaag tagtcgccga cccacgccaa aggcagatag gcgatcactt cctcctcgtg
     4201 cccgaggcgg tcgaaggcat tggcattgcg cgcggagatg atggtgttct cgtaggtgag
     4261 catcacgccc ttggagcggc cggtcgttcc cgacgtgtaa aggatgatgc tgagatcgct
     4321 gcccttgccc gcagcaattc cggcttccca tcggcgcagg cactcggggt cgctggcgag
     4381 tttcttgcgg ccgatgtcct ggacgtccgt aagcgcgatc aaccggccgt ggtcgtagtc
     4441 cttcagtccg cgcggctcgt cgtaaatgac ccggccaagc tgcgacagcc ggtcggagat
     4501 cgcgatgacc ttgtcgacct gctcctggtc ttcgacgacg gcaagcatca cctcggcgtg
     4561 cgccagtacg taggccatct cgtcggccac ggcgtcggca tagaccggca ccggaacggc
     4621 gccgagcgcc tgaccggcgc agatcgccca atacagccgc gggcgattgc tgccgatgat
     4681 ggtgaacttg tcgccgcgct tgagaccgag ttcggcgagc ccgacagaga aggcgcgaac
     4741 ttcctcgaga acctgctgcc acgtccaagc ctgccagacg ccgaggtcct tctggcgcat
     4801 cgccggccgc gcgccgatcg aggcggcatt gtgaatgaga agcttaggca gcgtgtccaa
     4861 gccgggatcg attgacgcca cgaggtccct ccgccggaag cgcgccgtcc gcaaagcgcc
     4921 ggcacgtcac ctgtctagcc gtgaaaacgc caccaagatg ccttggccgg atgcctgcgg
     4981 aaatacggca aatccaccca ggcgacgatc attgtcgtga cggttaagtc accccacgga
     5041 accgcgtgaa ttctcgcatt gctgcgcgaa aacgacaatg ctattcgacg cctcaagcgc
     5101 attttggctc gggaatcctt cagtactccc aagcccatga cccaaacagg ccgccaggcc
     5161 gggccacgcc ccatgctcga cccatccacg ggcgtcatac cgcaattctc gctcggtcaa
     5221 gaccaggtcg cgctacgcga catggcccgc gcgttcgcgg ccgaggtgtt tgccccgcat
     5281 gccatcgagt gggacgaggc caagcacttt ccggtcgccg aaatgcgcaa ggccgccgcg
     5341 ctcgggatgg gcggggtgta catcgccgag gacgtgggcg gatcggcgct gtcgcgcctg
     5401 gacgccgccc tgatcttcga ggcgctcgcc accggctgcc cgaccgtcac cgcctacatg
     5461 tcgatccaca acatgtcggc ctggatgatc gacgcctatg gatcggaggc gcagcgtcgc
     5521 caatggctgc cgcggctctg caccatggag cttctggcca gctactgcct gaccgagccg
     5581 ggcgccggtt cggacgccgc ggcgctggcg acgcgggcgg tgcgcgaggg cgacgactac
     5641 gtgctcaacg gccaaaagca gttcatctcg ggcgccggtg ccggtgacct ttacgtggtg
     5701 atggcgcgaa ccggcggctc cggggcggcc gggatctcga ccttcatcgt ccctggcgac
     5761 agcgccggta tctcgctcgg cgccaacgag cgcaagatgg gctggaacgc ccagccgacc
     5821 cgcgccgtgg tgttcgagga cgtgcgcgtg cccgtcgcca accggcttgg cgtggagggc
     5881 atcggcttca agatcgcgat gaccggactc gacggcggac ggctcaatat cgccgcctgc
     5941 tcgctcggcg gcgcgcagtc cgcgctggag aaggcgctag cctacatgaa ggagcggcgc
     6001 gccttcggca aacgcctcga tgaattccag gccctgcagt tccgcctcgc cgacatggcg
     6061 acggggctcg aggcctcgcg cacattcttg tggcgggcgg cggcggcgct cgacgccaag
     6121 gaggcgaatg ccactgagct ttgcgcgatg gccaagcgct ttgtcaccga cacctgcttc
     6181 gagatcgcta accaggcgct gcagctgcat ggcggctacg gctatctggc ggagttcggc
     6241 atcgagaaga tcgtgcgcga tctgcgcgtg catcagatcc tcgagggcac gaacgagatc
     6301 atgcgcctca tcgtggcgag aagtctcgtc gggcgatgag cgcaactctg cttcaggacg
     6361 gcgacgttct cgttcgcgag gagcgcgcgc tgcgccggct gacgctgaac cggcccacgg
     6421 cgctgaacgc gctcacgctc gacatggcgg tcacaatgac ggcgttgctg cgcgcctggg
     6481 ccggcgatcg caaggtcggc gcggtgctca tcgacggcgc cggggagcgc gggctgtgtg
     6541 ccggcggcga cattcgcgcc ctctacgacg cggcgaaagc caatagcgac ctgcccgcgc
     6601 gattctggtc gagcgaatat catctcgacg tattgatcgc gcgctacccc aagccggtga
     6661 ttgcagtcat ggacggcgtg gtgatggggg gtggggtcgg cgtctccgcg cacgccgccc
     6721 accgcatcgt gaccgagcgc tcggcgatcg ccatgccgga ggtcgggatc ggatactttc
     6781 ccgacgtcgg catctccttt ccgctggcgc gcgcgccagg acacgtcggc actcacctgg
     6841 aactgaccgg cgaccgcttg ggagcggccg acgcggtcta ttgcggcctt gccgatatcc
     6901 acgttccggc agcgcatctt gcggagcttc ccgcggcgct cgccgactgc cgcaccgccg
     6961 ccgatgtgca gacaaggctc aaggaaatgt ccgccatccc gtcgcccggc cggatggctg
     7021 cagcccggcc atggatcgac gactgctaca gcgccaatga cgtcgaggag atcattgcgc
     7081 gattgcgcgc ctgcgacacc gatggcgccc ggtcggcgtt ggcaagcctg gaaaaggtgt
     7141 cgccgacctc gctcaagatc gcgttgcgca acctccgctc ggcggcgtca ttccagaggg
     7201 tcgaggagag cttccagcaa gattaccgca tctcgctcgc gtgcatcgcc gggcatgatt
     7261 tcatcgaggg catccgcgcg gcgatcgtcg acaaggaccg caatccggcc tggcgaccgg
     7321 accagctcgc ggacgtgacg ccggaaatcg tcgaccgcca tttccgctcc atcggcgcgc
     7381 ttgaactggc ctttccacat tgaataagag gcgaacgcag atggcgacca tcggactgat
     7441 cggtctcggc aacatgggtg cgccgatggc cgccaacctc gtgaaggccg gcgagcgggt
     7501 tctggggttc gacctcatgc ctgcgttgcg cgaagcggcg gccagagatg gcgtggagat
     7561 cgtcgccgcc gcccggcagg ccacgcaaga ttccgagatc gtcgtcacca tgctgcccgc
     7621 cggcgaacac gtgcgctcgg tatgggccga tgtgctgccg gcggcgcgca aaggcgcgct
     7681 tttcatcgac tgctcgacga tcgacgtggc gagcgcgcgg gcggtccacg cgatggccgc
     7741 cgagcgcggc gtcgccgcgc tcgatgcccc ggtctccggc ggcgtcggcg gcgccaaggc
     7801 ggcgacgctg accttcatgg tcggcggctc ggccgaggcg ttcgcgcgtg gcaagccggt
     7861 tctcgagcgc atgggcaagc gggtggtgca ttgcggcgaa gccggcaacg gccaagtcgc
     7921 caagatctgc aacaacatga tcctcggcgt ctccatgatc gcggtcagcg aagcgttcgt
     7981 actgggcgaa aagctcgggt tgtcgcatca ggccctgttc gacgttgctt ccgcctcttc
     8041 agggcagtgc tggtcgctga cgagctactg tccggtgccg ggaccggtgc ccgcgagccc
     8101 ggcgaacaac agctacaagg caggcttcgc ggcggcgctg atgctcaagg atctcaagct
     8161 tgctagagag gccgcgcaat cggtgcaagc caacaccgcg ctcggtgcgc aggccgcaga
     8221 aatctacgag gacttcgcgc agaaaggcca aagcggggcc gacttctcgg cgatcatcaa
     8281 cctcgtgcgc gggcagccat aacaccgcaa cgggcatcgc ccggcggctc gccgcccgcg
     8341 ctcctgaacg atcaagggaa ttgccgcgct ggtatgcgga cgacctattt gggccggttg
     8401 ggcacctcga cttccgttcc gtcgccagcc ttcttcacct tcgcctgctt cttgtccggc
     8461 ccaattccgt agggctgctc cggcgacggg gtgcggtagc ctgtaggcgg gtcagtcaag
     8521 tccccgcgcg gcggctcgct gccgaacttc gcgtattctt ccttgttgaa ccagttcggc
     8581 gagaagctgc tcttctgttc ggattccggg ctggcttggg cggcgctgac attgggatcg
     8641 gcgatcgagg cagccgcgtt cggcacgggc gtggctggcg ccgccttgcc gcgggcgtgc
     8701 ttgtgcggct tgaccaccgg gttttgaggc cagtcggcga cgggcgcggg ggcggagccg
     8761 ggcggcggga gatcgcgcga cggcggcacg acgagcggtg cgcgctcgcc gtaggcgatg
     8821 ccggacgtgt cgacgcccga ccgcttgatg ccgattcccc gcatgaactt ggagaagaag
     8881 gattcgtccg gatcgtcgtc gccggcacgc gcgacattgc cgtgaaggcc ggctacggcg
     8941 accgccaaag cgacagccaa gccggcgcgc aagaacgtcg cgcgcaggcg cgctgcacgg
     9001 ccgaccttgc ggtcgcatct ttgaccctgc ggcatgccct cacccccgtg atgccgatac
     9061 ggcaacaatc cgggaatcat cccgggaccg gctagccttg atcaattgtt ttccgcgcga
     9121 tcacggcgct tttgcggcgt tcccggcccg gagcgaatcg tacaacaggc caacgacacc
     9181 cgcaacaatc gcgacatcgg cgaggttgaa cacgtaccag cggaagctga agcttgcggt
     9241 ctcgatatgg aacagcacga aatccatgac gccgggccag tgcagccggt cgatggcgtt
     9301 gccgaccgcc ccaccgatga tcagcccaag ggcggcggcg gcgagccgcg accgcgtccg
     9361 tgcgagccag acccacagga acgccacgac cacggccttg aatgcgagca gcgcccattg
     9421 gccgaacgcg ccctcctgcg gaaacaggcc gtagctgat
//
LOCUS       DATMQB010000479         3768 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3695806, whole genome shotgun sequence.
ACCESSION   DATMQB010000479 DATMQB010000000
VERSION     DATMQB010000479.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3768)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3768)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3768
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3695806"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..397
                     /locus_tag="VNY79_13930"
     CDS             <1..397
                     /locus_tag="VNY79_13930"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0042834 - peptidoglycan binding [Evidence
                     IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HWX73593.1"
                     /translation="GLAVDGVFGAATDAAVKEFQQGAGLTVDGVVGALTWAALPSGAP
                     MPTLREGANAVVRGLQQVLSNGASGQWNTSPGAIDGNFGPNTKAAVQAFQTWGGIAAD
                     GVVGDQTWAVSLHAASATLETAVGLQYAA"
     gene            complement(442..1107)
                     /gene="larB"
                     /locus_tag="VNY79_13935"
     CDS             complement(442..1107)
                     /gene="larB"
                     /locus_tag="VNY79_13935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018260012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA];
                     GO_process: GO:0006189 - 'de novo' IMP biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="nickel pincer cofactor biosynthesis protein
                     LarB"
                     /protein_id="HWX73594.1"
                     /translation="MTEHGIKPDWQRESRIGVGEAVYCSGKTAAQITRILALADERRQ
                     SLLLTKLDASRFAELDAGMQRRLDFDPLSRTAVLDHGVPTAVPAKVGIVCAGTSDMSV
                     AVEAQRGLAFHGVSAMVVGDVGVAGLWRLFDRLDEIAVWRVAIVVAGMEGALFSVVAG
                     QISGLVIAVPTSVGYGVAAGGTAALHCALASCSPGVVVVNIDNGFGAACAALKLLRVF
                     AST"
     gene            complement(1100..1906)
                     /locus_tag="VNY79_13940"
     CDS             complement(1100..1906)
                     /locus_tag="VNY79_13940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine nucleotide alpha hydrolase"
                     /protein_id="HWX73595.1"
                     /translation="MIPLERALAQVFATLDQVAVAVSGGVDSMTLAHLTHRHHGARAR
                     MVHAMSPAVPAEATARVRAHADRYGWALVLIDAGEFADSRYRTNPIDRCYFCKSNLYS
                     RIAGAFAGVILSGTNTDDLGDYRPGLKAADENGVRHPFVEVGMAKSDVRVVARALGLD
                     DVAELPAAPCLASRIETGIHINAADLALADEVERRVRAEFGAADVRCRITAQGVRVEL
                     GSEALERLRSPIGGATRAAVEEIVAGLGRAFLGYAPYRRGSAFVRNTSHD"
     gene            complement(1903..3108)
                     /locus_tag="VNY79_13945"
     CDS             complement(1903..3108)
                     /locus_tag="VNY79_13945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012333576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LarC family nickel insertion protein"
                     /protein_id="HWX73596.1"
                     /translation="MAKDPRPSLVILDPVGGVSGDMFIAAVLDAWPALATPVLRAIRN
                     SGLPQGSKVSLVQRRSGGLAAAGFVFEGSAAAPSGAYPDVRRRLTEAPLSASNRDHAL
                     GILALLAEAEAAVHRVAIERVHFHELADWDTVADIVGAAAIIDLLAGARWHCRPLPLG
                     TGTVRAAHGLLPVPAPAASHLLAGFAFRADDGAPGERVTPTGAAILRYLNPQIAGDGP
                     PGKLIATGTGAGSRQLPGVPNVLRVLGFAAAEPAGDTILVIEFDIDDQSPEELATGLD
                     RLRRVAGVRDVATFSGIGKKGRWLQAVRVMADPVHRDAVVGAVFEETATLGLRLRREE
                     RAVLARRTVVVEDGSGPVRVKLADRRGRRTGKAEADDVAAHAGGADARARARRSAVAR
                     ALRAVGRTP"
     gene            complement(3109..>3768)
                     /locus_tag="VNY79_13950"
     CDS             complement(3109..>3768)
                     /locus_tag="VNY79_13950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003592594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73597.1"
                     /translation="AVSCNLVGNPLHEEQLEIVRMLGDVMALNAIINEQRELVFVSYG
                     DIIESHDTAVRFVQDWIQVPVPRRFKTVVTSAAGFPLDQTYYQTIKSMVTPVDILAPG
                     GTLLVASDCSEGLGSKEFRASQRRLVEMGPDGFLRSILPKALADIDEWQTEMQLKPMR
                     VGRIQLFTGGLPPEDRSLTGVELVSDLDAAIRDAVVASGDGVAAFIPEGPYVIPKYVA
                     A"
BASE COUNT          700 a         1270 c         1212 g          586 t
ORIGIN      
        1 tgggttggcc gtcgacggcg tattcggggc agcgacagac gctgccgtga aggagttcca
       61 gcaaggtgcc ggtctgactg tcgatggcgt tgtcggggcg ttgacatggg cagcgctccc
      121 gagcggcgct ccgatgccga cattgcgcga gggcgctaac gcggtggtcc gcggtctcca
      181 gcaggtcctt tccaatggag catccggcca gtggaacacc tcgccgggtg caatcgacgg
      241 caacttcggc cctaatacca aagccgcagt tcaggccttt caaacctggg gcgggatcgc
      301 cgcggacggc gttgttggtg atcaaacgtg ggctgtctca ttgcatgcag caagcgcgac
      361 gctggaaacc gcggtcggcc ttcaatatgc ggcttgaaga gcgcgtgaca aggaccgttg
      421 tagccgcgcg accctcgctt ctcacgtaga agcgaagacg cgcaatagct tcaaagcggc
      481 gcaggccgcg ccaaaaccgt tatcgatatt gaccactaca acgcccggcg agcaggacgc
      541 gagagcgcaa tgcaaggccg ctgtgccacc cgcggcgacg ccgtagccga cggacgtcgg
      601 caccgcgatc accaagcccg atatttggcc ggcaactacg ctgaacagag ccccctccat
      661 ccccgcgaca acgatcgcta cgcgccacac tgcgatttca tcgagacggt cgaagagccg
      721 ccacaagccg gccacgccga catcgcctac caccatcgcc gacacgccat ggaaagccag
      781 tccacgctgc gcctcgacgg cgacgctcat gtcggacgta cccgcgcata caattccgac
      841 cttcgctggt accgctgtcg gtacgccgtg atcgagcacc gcggtccgcg aaagaggatc
      901 aaagtcgagc cggcgctgca tacccgcatc aagctcggcg aaacggctcg catcaagctt
      961 ggtgagcagt agcgactgtc ggcgctcatc cgccaacgcc aggatccgag tgatctgcgc
     1021 ggccgtcttg ccgctgcaat aaaccgcctc gccaacgccg atgcgggatt cacgctgcca
     1081 gtccggcttg atgccgtgct cagtcatgcg acgtgttgcg cacgaaggcg ctaccccggc
     1141 gatagggagc gtacccaaga aaggcgcgac ccaacccggc gacgatctcc tccacggccg
     1201 cccgggtggc gccgccgatc ggcgaccgta gccgctccag tgcttcgctg ccgagttcga
     1261 cgcgcacgcc ctgcgcagtg atgcggcagc gtacgtcggc cgcaccgaat tccgcacgca
     1321 cgcgacgctc gacctcatcg gcgagcgcca aatcagccgc attgatgtgg ataccggttt
     1381 caatccggct ggcaagacac ggcgccgccg gcagttccgc cacgtcatcg aggccaagcg
     1441 cgcgggcaac gacgcgaacg tcagatttgg ccattcccac ctcgacgaaa ggatggcgga
     1501 cgccattctc gtcggcggcc ttgagcccgg ggcgatagtc gccgaggtcg tctgtgttgg
     1561 tgcctgagag aatgacgccc gcgaacgcgc cggcaatccg actatagaga ttgctcttgc
     1621 agaaatagca gcgatcgatg ggattggtgc ggtagcgtga atcggcaaat tcgccggcgt
     1681 caatcagcac gagcgcccag ccgtagcggt cggcatgcgc acgcacccgc gccgtcgcct
     1741 ccgccggtac agccggtgac atcgcgtgaa ccatgcgggc ccgcgctcca tggtgacgat
     1801 gggtgagatg cgccagcgtc atgctgtcga cgccgccgct cacggcgacg gcgacctggt
     1861 cgagcgtcgc gaacacttgc gccagggcgc gctccagcgg aatcacgggg tccgcccaac
     1921 cgcgcgcaag gcgcgggcaa cagccgagcg gcgtgcgcgc gcgcgagcat ctgcaccgcc
     1981 ggcgtgagcg gcaacgtcgt cggcttcggc cttgccggtt cgccgccccc gacgatcagc
     2041 cagcttcacg cggacgggac cgctcccgtc ctcgacgaca acggtccggc gtgccaacac
     2101 cgctcgctcc tcgcgccgca gccgcagacc gagtgtcgcg gtctcctcga aaactgcgcc
     2161 gacgaccgca tcgcggtgca ccggatcagc cattacccgc actgcctgca gccaacgccc
     2221 ctttttgccg atgccggaga aggtcgcgac gtcgcggacg cccgcaacgc gccggagacg
     2281 atcgaggccc gtcgccaact cttcgggtga ctgatcgtcg atgtcgaact ctatcacaag
     2341 gatcgtatcg cctgccggtt ccgccgcagc gaaaccgaga acgcgcagca cgttgggaac
     2401 acccgggagc tgccggctgc cagcgcccgt gccggtcgca atcaattttc cgggcggtcc
     2461 gtcgccggca atttgcggat tgagatagcg caggatggcg gcgccggtcg gcgtcactct
     2521 ctcgcccggc gcgccatcgt cggcgcggaa tgcgaagccg gcgagcagat gagaggcggc
     2581 cggcgccggc accggcaaaa gcccgtgggc cgcgcgcacc gtgccagttc cgagcggcag
     2641 cggccggcaa tgccagcgcg cccccgcgag aagatcgatg atggcggccg cgccgacgat
     2701 gtcggccacg gtgtcccaat ccgccagttc atgaaaatgt actctctcga tcgcaacacg
     2761 atgtaccgct gcttctgcct cggccagcag cgccaggatg ccgagagcgt ggtcgcgatt
     2821 cgatgcagag agcggcgcct cggtgagcct tcggcgaaca tcggggtaag caccgctcgg
     2881 ggcggctgcg cttccctcga agacaaaccc cgctgcggca aggccaccgc tgcggcgttg
     2941 cacgagcgag actttgctgc cttgcgggag gccgctgttc ctgatcgcgc gcaacaccgg
     3001 cgtggccagt gcaggccatg cgtcgagcac cgcagcgatg aacatgtcgc cgctcacgcc
     3061 gccgacgggg tcgagaatga ctagcgacgg acgcgggtcc ttggccattc acgctgccac
     3121 atatttgggg atcacgtacg gcccttcggg gatgaaagct gcaaccccgt cgccgctggc
     3181 gacaaccgcg tcgcgtatgg cggcatcgag gtcgctcacc aactcgactc cggtgagcga
     3241 gcggtcctcg ggcggaagac cgccagtaaa gagctggatc cgcccgactc gcatgggctt
     3301 gagctgcatc tcggtctgcc attcgtcgat gtcggccagc gctttgggca ggatgctgcg
     3361 caggaatccg tcgggcccca tctcgacaag acgacgctgc gacgcccgga actccttgga
     3421 cccgagcccc tccgaacagt cggatgcgac gaggagcgtg ccgccggggg ccagaatatc
     3481 gaccggtgtc accatgcttt tgatggtctg gtagtaggtc tggtcgagcg gaaatcccgc
     3541 ggcggaagtg acaacggttt tgaagcggcg cggcaccggc acttggatcc agtcctggac
     3601 gaagcgcacg gcagtatcat ggctttcgat gatgtcgccg tacgagacga agaccagctc
     3661 acgctgctca ttgatgatgg cgttaagcgc catgacgtct cccagcatgc gcacgatctc
     3721 gagctgctcc tcgtgcaagg gattgccaac aagattgcac gagaccgc
//
LOCUS       DATMQB010000480         2157 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3087815, whole genome shotgun sequence.
ACCESSION   DATMQB010000480 DATMQB010000000
VERSION     DATMQB010000480.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2157)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2157)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2157
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3087815"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            90..1358
                     /locus_tag="VNY79_13955"
     CDS             90..1358
                     /locus_tag="VNY79_13955"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002718214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004072 - aspartate kinase activity
                     [Evidence IEA];
                     GO_process: GO:0009089 - lysine biosynthetic process via
                     diaminopimelate [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HWX73598.1"
                     /translation="MARLVMKFGGTSVADIDRIRNVARHVKREVDAGHDVAVVVSAMA
                     GTTDQLVGWCEAALKKRQLFDSREYDAVVATGEQVTAGLLAIALQDMDINARSWQGWQ
                     LPVLTSNLHGSARILDINGAELIRRFSERSEVAVIAGFQGMYKETGRITTLGRGGSDT
                     SAVAMAAAIRADRCDIYTDVDGVYTSDPRVVPRARRLAKIAFEEMLELASLGAKVMQV
                     RSVELGMVHNVRIFVRSSFDRPEDIDPRGNPPGTLICDEDEIMEQQVVTGIAFSRDEA
                     QISIREVQDKPGVAAAIFGPLAEANINVDMIVQNVSADGKTTDLTFTVPATDFQRALE
                     VITRAKQAIGYQRLDSATDVAKISVIGIGMRSHAGVAAQAFRALGERAVNIRAITTSE
                     IKFSLLIDAAFTELAVRTLHSLYGLDKASP"
     gene            1562..>2157
                     /locus_tag="VNY79_13960"
     CDS             1562..>2157
                     /locus_tag="VNY79_13960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018643525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005515 - protein binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HWX73599.1"
                     /translation="MRGALGGPRVLLRRLREVMAEPVSAQERLDKIVVLIAANMVAEV
                     CSVYVLRVDSTLELYATEGLNRDAVHHTVMRADEGLVGLVASQASAVNLSNAQAHPAF
                     SYRPETGEEIYHSFLGVPILRAGNTLGVLVVQNRARRTYSEEEVEALQTTAMVLAEMI
                     ASGELAALAQPGAEPAARHSLHKTGAVLSDGIALGHVVL"
BASE COUNT          351 a          754 c          702 g          350 t
ORIGIN      
        1 gccatggcgc gcggccggta tctatacgcg cgttttatct gccggctctc agcctgagaa
       61 ggccgtcgcc gaggaacgac acgaccgcca tggcccgcct cgtgatgaag ttcggcggca
      121 cttccgtcgc cgacatcgac cgcatccgca acgtcgcgcg ccatgtgaag cgcgaggtcg
      181 acgccggcca tgacgtggcg gtcgtggtat cggccatggc cggtaccacc gaccagctcg
      241 tcggctggtg cgaggcggcg ctcaagaagc gccagctgtt cgattcgcgc gagtacgatg
      301 cggtcgtcgc caccggcgag caggtgaccg ccgggctgct cgccatcgcg ctgcaggaca
      361 tggacatcaa cgcgcgctcc tggcaggggt ggcagctccc ggtcctgacc tcgaatctgc
      421 acggctctgc gcgcatcctc gacatcaacg gcgccgaact gatccgccgt ttcagcgagc
      481 gcagtgaagt cgcggtcatc gccggctttc agggcatgta caaggagacc ggccgcatca
      541 ccacgctcgg ccgcggcgga tcggacacat cggccgtggc gatggcggcc gccatccgcg
      601 ccgaccgctg cgacatctac accgacgtcg acggcgtcta tacctccgac ccgcgcgtgg
      661 tgccgcgtgc gcgccggctc gccaagatcg cgttcgagga aatgctggag ctcgcctcgc
      721 tcggcgccaa ggtgatgcag gtgcgttcgg tcgagctcgg catggtgcat aacgtgcgca
      781 tcttcgtgcg ctcgagcttc gatcggcccg aagacatcga cccgcgcggc aacccgccgg
      841 gcacgctcat ctgcgacgag gacgaaatca tggaacagca ggtggtcacc ggcatcgcct
      901 tctcccgcga tgaggcgcag atctcgatcc gcgaagtgca ggacaaaccc ggtgtcgccg
      961 ccgcgatctt cggcccgctg gccgaagcca acatcaacgt cgacatgatc gtacagaacg
     1021 tctccgccga cgggaaaacc accgacctca ccttcaccgt gccggccacc gacttccagc
     1081 gcgcgctcga ggtcatcacc agggcgaagc aggcgatcgg ctaccagcgc ctcgacagcg
     1141 ccaccgacgt cgccaagatt tccgtcatcg gcatcggcat gcgcagccat gccggcgtcg
     1201 ccgcgcaggc gttccgcgcg ctcggcgagc gcgcggtcaa catccgcgcc atcaccacct
     1261 cggagatcaa gttctccctg ttgatcgacg cggctttcac tgagctcgcg gtccgcacgt
     1321 tgcattcgtt gtacggcctc gacaaagcat cgccgtaatc gccgccgcgg tcgcgctgca
     1381 gcgcacaaaa acgtctgcag ccgtcatatc cttgtctctg gcttgcggtt tgcatggcgc
     1441 attcgctata ggcttgaggg tggtcgccgc gggtcccggc ccgggcgaac tcttcttcga
     1501 tgacggccgg cgcgacgcgg gctaagcgcc ggtcaaagcg gtgcccgagg gatctcacgc
     1561 catgcgtggc gcgctcggcg gtccccgcgt gctgttgcgc cggctgcgcg aagtcatggc
     1621 ggagccggtc agcgcgcagg agcgccttga caagattgtg gtgctgatcg ccgcgaacat
     1681 ggtcgcggag gtgtgctccg tctacgtcct gcgcgtcgat tccacgctcg agctctacgc
     1741 caccgagggc ctcaatcgcg atgccgtgca ccacacggtg atgcgcgccg acgagggtct
     1801 ggtcggcctg gtggcgagcc aggccagcgc cgtcaacctg tcgaacgcgc aggcccatcc
     1861 ggccttctcg taccggccgg agaccggcga agagatctac cattccttcc tcggcgtgcc
     1921 gatcctgcgc gctggcaaca cgctcggcgt gctggtggtg cagaaccggg cgcgccggac
     1981 ttattcggag gaagaggtcg aggcgctcca gaccaccgcc atggtgctgg cggaaatgat
     2041 cgcctccggc gagctcgccg ccctcgcgca acccggcgcc gagcctgcgg cgcggcactc
     2101 cctgcacaaa acgggagcgg tgctgtccga cggcatcgcg ctcggccacg tggtgct
//
LOCUS       DATMQB010000481         2134 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_3700231, whole genome shotgun sequence.
ACCESSION   DATMQB010000481 DATMQB010000000
VERSION     DATMQB010000481.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2134)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2134)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2134
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_3700231"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..869
                     /gene="lipA"
                     /locus_tag="VNY79_13965"
     CDS             <1..869
                     /gene="lipA"
                     /locus_tag="VNY79_13965"
                     /EC_number="2.8.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013502584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016992 - lipoate synthase activity
                     [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:1904047 - S-adenosyl-L-methionine binding
                     [Evidence IEA];
                     GO_process: GO:0009107 - lipoate biosynthetic process
                     [Evidence IEA]"
                     /codon_start=3
                     /transl_table=11
                     /product="lipoyl synthase"
                     /protein_id="HWX73600.1"
                     /translation="RKPDWIRVKAPVSAGYVETQRIVRANGLHTVCEEAGCPNIGECW
                     EKKHATFMIMGDTCTRACAFCNVKTGLPQPLDAAEPARVAEATAKLGLAHVVVTSVDR
                     DDLDDGGAAHFAAVIGAIRERCPKTTIEVLTPDFLRKPGAAETVVAARPDVFNHNLET
                     VPSKYLAVRPGARYFASLRLLQRVKEIDPPMFTKSGIIVGLGEERNEVLQVMDDLRAA
                     DVDFLTIGQYLQPSRKHHPVVRFVPPDEFKALATIALAKGFSIVSASPLTRSSHHAGE
                     DFARLKASRAAR"
     gene            874..1332
                     /locus_tag="VNY79_13970"
     CDS             874..1332
                     /locus_tag="VNY79_13970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014495347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HWX73601.1"
                     /translation="MPQLSTTRRVRHAAAEMFDLVADVERYPEFVPLCRSLTVRARTR
                     EGGKDVIVADMTVAYKFVRDTFTSRVTLDRANLEILVEYLEGPFQRLNNRWKFRPVGD
                     HACDVEFFIAYEFRSRTLGTLMGSVFDAAFRRFAAAFERRADLVYGSRPA"
     gene            complement(1311..1874)
                     /locus_tag="VNY79_13975"
                     /pseudo
     CDS             complement(1311..1874)
                     /locus_tag="VNY79_13975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011087256.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="CinA family protein"
     gene            complement(1871..>2134)
                     /locus_tag="VNY79_13980"
     CDS             complement(1871..>2134)
                     /locus_tag="VNY79_13980"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012496039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008685 - 2-C-methyl-D-erythritol
                     2,4-cyclodiphosphate synthase activity [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_process: GO:0016114 - terpenoid biosynthetic process
                     [Evidence IEA];
                     GO_process: GO:0019288 - isopentenyl diphosphate
                     biosynthetic process, methylerythritol 4-phosphate pathway
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HWX73602.1"
                     /translation="RFLAFACERVRARSGVIAHLDVTIVCEAPRVAPHRDAMRASIAA
                     IAGIPITRVAVKATTSEKLGFTGRGEGIVAMATATVRLPWSAA"
BASE COUNT          346 a          758 c          701 g          329 t
ORIGIN      
        1 tgcgcaagcc ggactggatc agagtcaagg cgccggtgtc ggcgggctat gtcgagacgc
       61 agcgcatcgt gcgcgccaac ggcctgcaca ccgtatgcga ggaggccggc tgtcccaata
      121 tcggcgagtg ctgggagaag aagcacgcaa ccttcatgat catgggcgat acctgcaccc
      181 gcgcctgcgc cttctgcaac gtcaagaccg gcttgccgca gccgctcgat gcggccgagc
      241 cggcgcgggt cgcggaagcg accgccaagc tcggactcgc ccatgtcgtg gtcacctcgg
      301 tcgatcgcga cgatctcgac gacggcggcg cggcgcattt cgccgccgtc attggcgcca
      361 ttcgcgaacg ctgcccaaag acgacgatcg aagtgttgac gccggatttt ctgcgcaagc
      421 cgggcgccgc cgaaacggtc gtcgcggcgc ggccggacgt cttcaaccac aacctggaaa
      481 cggtgccgtc gaaatacctc gccgtgcggc cgggcgcgcg ctatttcgcc tcgctccgcc
      541 tgctccagcg cgtgaaggag atcgacccgc cgatgttcac caaatcgggg atcattgtgg
      601 ggctcggcga ggagcgcaac gaggtgctgc aggtcatgga cgatctgcgc gccgcggacg
      661 tggattttct caccatcggc caatacctgc agccctcgcg caagcatcac ccggtggtgc
      721 gcttcgtgcc gccggatgaa ttcaaggcat tggcgacgat cgctcttgcc aaggggttct
      781 ccatcgtttc cgcaagcccg ctcacgcgct cgtcgcatca cgcaggcgag gattttgcac
      841 ggctgaaggc gtcgcgcgcg gcgcgttgaa tccatgccgc agctatccac cacccggcgc
      901 gtccggcacg ccgccgccga gatgttcgac ctcgtcgccg atgtcgagcg ctatcccgaa
      961 ttcgtgccgc tgtgccgatc gctcaccgtg cgggcgcgca cccgcgaggg cggtaaggac
     1021 gtcatcgtcg ccgacatgac cgtggcctac aagttcgtcc gcgatacgtt caccagccgc
     1081 gtcacgctcg accgcgccaa cctggaaatc ctggtcgaat acctggaagg cccgtttcag
     1141 cggctgaaca atcgctggaa gttccgcccc gtcggcgatc acgcctgcga cgtcgagttt
     1201 ttcatcgcct acgagttccg cagccgcaca ctcggcaccc tcatgggcag cgtcttcgac
     1261 gccgccttcc gccgcttcgc cgccgccttc gaacgccgcg ccgacctcgt ctacggcagc
     1321 agaccggcgt aagccgcaaa ggtagattgt ctttggttga tccggaacct tcagccggac
     1381 ccctcctcgg cgagcgcctg caacagcgcg agcgcgtcgg cgaccgagcg ctcgcgcacg
     1441 cggcgccggc cgatcctgcc gtaacggcgg ctgcgggcga gcaggcggcc gtcgcggcgt
     1501 gcggcggcga aatgcacgag cccgacaggc ttttgccttg aaccgccgcc cggaccggcg
     1561 atgccggtga tcgccaccgc aaggtcggcc tgcgagcggc caagggcgcc ggccgccatc
     1621 gccgcagcgg tctcggcgct cacggcgccg tgccgcctca gcgtcgccgg cggcacgccg
     1681 agcatcgcct ccttcgcggc gttcgaatag gtgacgaaac cgcactcgac gacgtcggac
     1741 gagcctgcga tctcggtcag cgccgcggcg accaggccgc cggtacaaga ctcggcggtc
     1801 gcgacgtgca agccgcgccg gcggcacagg tcgaggagac gcttggccgc cgcacgcaga
     1861 tcgtccgcga tcaagctgcg ctccacggca gccgcaccgt cgctgtcgcc atcgctacga
     1921 tgccttcgcc gcggccggtg aagccgagct tttcgctcgt cgtcgccttg accgcgacgc
     1981 gggttatggg aatgccggcg atcgccgcaa tgctcgcgcg catggcgtcg cggtgcggag
     2041 caacgcgcgg cgcctcgcac acaatggtca cgtcgagatg cgcgatcacg ccggagcgcg
     2101 cgcgcacgcg ctcgcaggcg aaggcgagaa agcg
//
LOCUS       DATMQB010000482         3804 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2162412, whole genome shotgun sequence.
ACCESSION   DATMQB010000482 DATMQB010000000
VERSION     DATMQB010000482.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3804)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3804)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3804
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2162412"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            <1..724
                     /locus_tag="VNY79_13985"
     CDS             <1..724
                     /locus_tag="VNY79_13985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011942682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="GTPase"
                     /protein_id="HWX73603.1"
                     /translation="RDGIVIAIAGPPNAGKSTLLNRLARREAAIVSPFPGTTRDVIEV
                     HMDLDGYPATLLDTAGLRQSDDPVEREGVRRAEERAQSADLVLWVTDVSADGGAAGDK
                     PKYAAGSDVWVVANKADLVGDERCESRASRPTADRPPTFAISALTGTGVDALMAALSA
                     YARGYFATTESAIVTRARHRRALEETVAALDHCLAEGPSGREELIAEELRAAAVTLGR
                     LTGRVDVEDILDVIFRDFCIGK"
     gene            869..2746
                     /gene="mnmG"
                     /locus_tag="VNY79_13990"
     CDS             869..2746
                     /gene="mnmG"
                     /locus_tag="VNY79_13990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011313434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0050660 - flavin adenine dinucleotide
                     binding [Evidence IEA];
                     GO_process: GO:0002098 - tRNA wobble uridine modification
                     [Evidence IEA];
                     GO_process: GO:0008033 - tRNA processing [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HWX73604.1"
                     /translation="MPIEARYDVIVVGGGHAGCEAAAAAARMGARTAMITQRPATIGA
                     MSCNPSIGGLGKGHLVREIDALDGLMGGVADASGIQFRVLNRRKGPAVRGPRAQADRK
                     RYAAAMQAAIESMANLTVVAGEVDDLLVLGRVTGVRLTDGREFGAGAVVLTTGTFLRG
                     LIHIGERQIPAGRVGEAPALGLSRTLARAGLALGRLKTGTPPRLDGSTIDWAAVERQP
                     GDEPPEPFSVLTERIANPQVECGITRTTPATHEIIRANVHRSPMYSGQIKSRGPRYCP
                     SIEDKIVRFGERDGHQIFLEPEGLDDTTVYPNGISTSLPEDVQLKLVASIPGLERARV
                     VRPGYAIEYDHVDPRELDPSLETKRVPGLFLAGQINGTTGYEEAAAQGLVAGLNAAAC
                     AAGAAPIVFDRAEGYLGVMIDDLVTRGVTEPYRMFTSRAEYRLTLRADNADQRLTGKG
                     ITLGYVGRERAQVHRAKMAALDGARSMARALTLTPTEATAHGLALRKDGHRRSAFELL
                     SYPTIGIGDLAGIWPAFGGLDPKIAEQLETDAKYEVYLSRQAADVESYRRDESLVLPE
                     DIDYGVLPGLSNEVRHKLKTHRPRSIGQAGRLDGVTPAALTLLVAHMRRQGGKRSRGA
                     A"
     gene            2746..3471
                     /gene="rsmG"
                     /locus_tag="VNY79_13995"
     CDS             2746..3471
                     /gene="rsmG"
                     /locus_tag="VNY79_13995"
                     /EC_number="2.1.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013168575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005575 - cellular_component [Evidence
                     IEA];
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA];
                     GO_process: GO:0031167 - rRNA methylation [Evidence IEA];
                     GO_process: GO:0046118 - 7-methylguanosine biosynthetic
                     process [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HWX73605.1"
                     /translation="MAADQRRRRGKGGREPPWRKISGSEADLLADRGRALALTPVSRE
                     TAARLDRFVALLLDWQRRINLIAASTEAKAWTRHVADSLQLLALAPEARRWVDLGSGG
                     GFPGLVIACALADTEGAEVHLVESNAKKAAFLREARRATGAPAVIHAARIEDFVDNAP
                     GGLEVVTARALAPLVDLLASAYPLLQRGASGLFPKGQAAASELTDAGKRWKIRASLEV
                     SRTDPQARIVVVRGLEPKCPAGA"
     gene            3523..>3804
                     /locus_tag="VNY79_14000"
     CDS             3523..>3804
                     /locus_tag="VNY79_14000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017485122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HWX73606.1"
                     /translation="MSDTSSSDESTRVLSFSAPHRPTPAPAKPPRILAVANQKGGVGK
                     TTTAINLGTALAAIGADVLVVDLDPQGNASTGLGIDRRNRRYSTYDVLIG"
BASE COUNT          620 a         1273 c         1290 g          621 t
ORIGIN      
        1 gcgcgacggg attgtcatcg ccatcgccgg gccgcccaac gccggaaagt cgaccttgct
       61 caaccggctg gcgcggcgcg aggcggcgat cgtttcgccc tttccgggga cgacgcgcga
      121 cgtgatcgag gtccacatgg atctcgacgg ctaccccgca acgctcctcg acaccgccgg
      181 cctgcggcag agcgacgatc cggtcgagcg tgagggcgta cgtcgtgccg aggagagggc
      241 gcagagcgcc gatctcgttc tgtgggtcac tgacgtatcg gccgatggcg gagctgctgg
      301 ggataaaccc aaatacgccg ctggctcaga tgtttgggtc gtggcgaata aggcggattt
      361 ggttggggac gagcggtgcg aaagccgtgc atcgcgaccc accgcggatc ggccgccgac
      421 cttcgcgatc tcggcgctga cgggaaccgg cgtggacgcg ctcatggccg cgctctccgc
      481 gtatgcgagg ggttacttcg ccaccaccga gtcggcgatc gtcacccgcg cgcggcatcg
      541 ccgggcgctc gaggagaccg tcgccgcgct cgatcactgc ctggccgaag gcccttccgg
      601 gcgcgaggag ctgatcgcgg aggaactgcg cgccgccgcg gtgacgcttg gccgactgac
      661 cgggcgggtg gatgtcgagg acatcctcga tgtcattttc cgcgatttct gcattggtaa
      721 atgattggtt aatgaatggt taacaaacgt ggttaacgac cgctttgcgt gagcgcgctt
      781 cgtttcacgt gaaacacccg ctggtcgcgg cgattttgac cggcgatggt gggttggcta
      841 gaaccaccgc gcttttggaa cagagaagat gccgatcgaa gcgcgatacg acgtgatcgt
      901 tgtcggcggc ggccatgccg gctgcgaagc cgctgccgcc gccgcgcgca tgggcgcacg
      961 caccgccatg atcacgcagc ggccggcgac catcggcgcc atgtcgtgca atccgtccat
     1021 cggcgggctc ggaaagggcc atctcgtgcg cgagatcgac gcgctcgacg gcctcatggg
     1081 cggcgtggcg gacgccagcg gcatccagtt ccgcgtgctc aaccgccgca agggcccggc
     1141 ggtgcgcggc ccgcgtgccc aggccgaccg caagcgctat gccgcggcga tgcaggcggc
     1201 gatcgaatcg atggccaacc tcacggtcgt cgccggggag gtggacgatc ttctcgtttt
     1261 ggggcgtgtc accggagtac gcctgaccga cggccgcgaa ttcggggcag gggcggtggt
     1321 gctgacgacg ggcaccttcc tgcgcgggct catccatatc ggcgaacggc aaattccggc
     1381 gggacgcgtt ggcgaggcgc cggcgctcgg tctctcacgc acgctggcgc gcgccggcct
     1441 tgcactcggc cgtctcaaga ccggcacgcc gccacggctc gacggcagca cgatcgactg
     1501 ggccgcggta gagcggcagc cgggcgacga gccgccggaa cctttttcgg tcctgacgga
     1561 gcgcatcgcc aatccgcaag tagaatgcgg catcacccgc acgacgccgg cgacgcacga
     1621 gatcattcgc gcaaatgttc accgctcgcc gatgtattcg ggccagatca agagcagggg
     1681 cccgcgctac tgtccttcga tcgaggacaa gatcgtgcgc ttcggcgaac gcgacgggca
     1741 ccagattttt ctcgagcccg aaggcctcga cgacacgacc gtctatccga acggcatttc
     1801 cacgtcgttg cccgaggacg tgcagctcaa gctcgtcgct tccattcccg gcctcgagcg
     1861 cgcgcgtgtc gtgcgccccg gttacgcgat cgaatacgac cacgtcgatc cgcgcgagct
     1921 cgatccgtcg ctggagacga agcgcgttcc cggcctcttc ctcgccggtc agatcaacgg
     1981 caccactggc tatgaggaag cggccgccca gggtctcgtc gccggcctca atgccgcggc
     2041 gtgcgccgcc ggcgcagcgc cgatcgtgtt cgatcgcgcc gaagggtatc tcggcgtcat
     2101 gatcgacgat ctggtgacgc gcggcgtcac cgaaccctat cgcatgttca cctcgcgcgc
     2161 cgagtatcgg ctgacgctgc gggccgacaa cgccgatcag cggctcaccg gcaagggcat
     2221 cacgctcggc tacgtcggcc gcgagcgcgc gcaggtgcac cgcgccaaga tggcggcgct
     2281 tgacggcgcg cggtcgatgg cccgggcgct gacgctcacg ccgaccgagg ccacggcgca
     2341 cggcctcgcc ctgcgcaagg acggccatcg ccgcagcgcc ttcgagctgc tgtcgtaccc
     2401 gactatcggc atcggcgatc ttgctggcat ctggccggcg tttggcggcc tcgacccgaa
     2461 aatcgccgag cagttggaaa ccgacgcgaa atacgaggtc tatctttccc gccaggcggc
     2521 cgatgtcgaa tcctatcgcc gcgacgagag cctcgtgctg cccgaggaca tcgattacgg
     2581 agtgcttccg ggattgtcga acgaggtgcg ccacaagctc aaaacccatc ggccgcgcag
     2641 cattgggcaa gccggccgcc ttgacggcgt cacgccggcg gcgctcacgc tcctggtcgc
     2701 gcatatgcgt cggcaaggcg gcaagcgcag ccgcggcgcg gcgtgatggc ggccgatcag
     2761 cgccgacgcc gcgggaaggg cgggcgcgaa cctccttggc ggaaaatttc cgggagtgaa
     2821 gcggatctct tggccgatcg cggccgggcg ctggcgctga cgcctgtttc acgtgaaaca
     2881 gcggcgcgcc tcgaccgctt cgtcgcgctc ctcctcgatt ggcagcggcg catcaacctg
     2941 atcgctgcct cgacggaagc gaaagcgtgg acgcgccatg tcgccgattc gctgcaactc
     3001 ctcgcattgg cgccagaggc acgccgatgg gtcgacctcg gctccggggg tggcttcccc
     3061 ggcctggtga tcgcttgcgc acttgccgat accgaggggg ccgaggtcca cctcgttgaa
     3121 agcaacgcca agaaggcggc cttcctgcgc gaagcgagaa gggcaaccgg ggctccggcg
     3181 gtgatccacg ccgccaggat cgaggatttt gttgataacg ccccgggagg cctcgaggtg
     3241 gtgacggcgc gggcgcttgc tccccttgtc gacctcctcg ccagcgcgta tccgctgttg
     3301 cagcgggggg cttcgggtct ctttcccaag ggccaggcgg ctgccagcga attgaccgac
     3361 gccggtaaac gttggaagat tcgcgcgagc ctcgaagtga gtcggactga cccgcaagct
     3421 cgcatagtgg tcgtgcgtgg tctcgaaccg aagtgtccgg ccggcgcctg agcgcgattc
     3481 ggttaacgtg gtattaaccc tgacagaggt ttatcggcag cgatgagcga tacgtcatcc
     3541 tcggatgagt ccacgcgcgt gctctcgttc tcggcgccgc atcgcccgac cccggcgccg
     3601 gccaagccgc cgcggatctt ggcagtcgcc aatcagaagg gcggcgtcgg caagaccacg
     3661 acggcgatca acctcggcac cgcgcttgcc gcgatcggcg ccgacgtcct ggtcgtcgat
     3721 ctcgatccgc aaggcaatgc ttcgaccggt ctcggcatcg atcgccgcaa ccgccgctac
     3781 tccacctacg acgttctcat cggc
//
LOCUS       DATMQB010000483         2880 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_1828070, whole genome shotgun sequence.
ACCESSION   DATMQB010000483 DATMQB010000000
VERSION     DATMQB010000483.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 2880)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2880)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2880
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_1828070"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..364)
                     /locus_tag="VNY79_14005"
     CDS             complement(<1..364)
                     /locus_tag="VNY79_14005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009735519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HWX73607.1"
                     /translation="MKMHILSGGRVRVRKRIYLPDAPHGETLDVPVSSILLRHAQGNV
                     LFDTGCHPDVPTDPQARWGGLLKVMTPVMQPGDNVINALAGVGLECDDVDVVVCSHLH
                     PDHCGCNTFFRRATCIIHA"
     gene            complement(361..846)
                     /locus_tag="VNY79_14010"
     CDS             complement(361..846)
                     /locus_tag="VNY79_14010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019198548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA];
                     GO_function: GO:0051536 - iron-sulfur cluster binding
                     [Evidence IEA];
                     GO_function: GO:0051537 - 2 iron, 2 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="(2Fe-2S)-binding protein"
                     /protein_id="HWX73608.1"
                     /translation="MSKTRDITVTVNGEAFAAAVEPRLLLADFLRHTLGLTGTHVGCE
                     HGVCGACTVLLDGDSVRSCLMFAVQADRRSVETVESLGRIGAMNRLQEAFHEHHALQC
                     GFCTPGMLMTTTDLMKKYRLETDDDIRDGLSGNLCRCTGYEHIIKAIRAVVDRKAEDT
                     R"
     gene            complement(843..1718)
                     /locus_tag="VNY79_14015"
     CDS             complement(843..1718)
                     /locus_tag="VNY79_14015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006019524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="FAD binding domain-containing protein"
                     /protein_id="HWX73609.1"
                     /translation="MKPAPFDYIAATSVDMAAAALADGGDDAKIIAGGQSLVPLLNFR
                     LLRPSILIDINRIESLAFISETATDIRVGALTRHYQLETSPVIARHLPVLSCAMTHVA
                     HLAIRNRGTIGGSLAHGDPAAELPMMALLLDAELHIGSVAAARITAARDFFLDALTVD
                     LNAGEIVTEIALPKLPPQTGWGFAEVSRRGGDFALAAAAATLAVAAGAIVEARIALSG
                     IGRTAVRAATAESLLVGHALEPPLVSQAIEAVRAAIGPDTDLHASADYRRHLAGVLTG
                     RALAAAWRRANESAA"
     gene            complement(1735..2505)
                     /locus_tag="VNY79_14020"
     CDS             complement(1735..2505)
                     /locus_tag="VNY79_14020"
                     /EC_number="3.5.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018271503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016812 - hydrolase activity, acting on
                     carbon-nitrogen (but not peptide) bonds, in cyclic amides
                     [Evidence IEA];
                     GO_function: GO:0046872 - metal ion binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cyclase family protein"
                     /protein_id="HWX73610.1"
                     /translation="MRIIDLSVALKAGIASDPPYMLPSIEYVDHREGAKQFTQVFPGL
                     KVEQLPDGEGPAVERVTISTHNGTHLDAPWHFASTMDGGKPSLKIDQVPLEWFLSAGV
                     KLDFRNKADGYVCKADDVKRELDRIGHTLKPLDIVLVNTAAGAAYGDPSFLNKGCGMG
                     REATLYLLKQGVRVAGTDAWSWDAPFSFTAKRFAETGDPSIIWEGHKASREIGYCHME
                     KLANLDKLPPSGFRVCCFPVKIEAASAGWTRCVALLDG"
     gene            2819..>2880
                     /locus_tag="VNY79_14025"
     CDS             2819..>2880
                     /locus_tag="VNY79_14025"
                     /inference="COORDINATES: protein motif:HMM:NF012534.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="cold shock domain-containing protein"
                     /protein_id="HWX73611.1"
                     /translation="MSNGTVKWFNAQKGYGFIQP"
BASE COUNT          498 a          913 c          982 g          487 t
ORIGIN      
        1 tggcgtgaat gatgcaggtc gcgcgcctga agaaagtgtt gcagccgcaa tggtcgggat
       61 gcaggtgcga gcacacgacc acgtcgacat cgtcacattc gaggccgacg ccggcgagtg
      121 cgttgatcac gttgtcgccc ggctgcatga ccggcgtcat gaccttgagg aggccgcccc
      181 agcgcgcctg cgggtcggtc gggacgtcgg gatggcaacc ggtatcgaac agcacgttac
      241 cctgagcatg gcgcagcagg atcgaggaca ccggtacgtc gagggtttcc ccgtgcggcg
      301 cgtcgggcag atagattctc ttgcgcacgc gcacgcgtcc gccggagagg atgtgcatct
      361 tcatcgcgtg tcctcggcct tgcggtcgac gaccgcccgg atcgccttga tgatgtgctc
      421 gtagccggtg cagcggcaca gattgcccga caggccgtcg cggatgtcat cgtcggtttc
      481 gagccggtac ttcttcatga ggtcggtcgt cgtcatcagc atgcccggcg tgcagaagcc
      541 gcattgcagc gcatgatgct cgtggaacgc ctcctgcagc ctgttcatcg ctccgatgcg
      601 cccgaggctt tcaacggttt cgacgctgcg gcggtcggcc tgcactgcga acatcaggca
      661 ggagcgcacg ctgtcgccgt cgagaagcac ggtacaggcg ccgcagacgc cgtgttcaca
      721 cccgacatgg gtgccggtga ggccaagcgt gtggcgcagg aaatccgcga gcagcaatcg
      781 cggctccacc gcggccgcga aagcctcacc gttgacggtc acggtgatgt cgcgcgtctt
      841 gctcatgcgg cgctttcgtt ggcgcgccgc caggccgcgg cgagcgcccg gcctgtcagc
      901 acgccggcga ggtgacgccg gtagtccgcg gaggcatgca ggtcggtgtc gggcccgatg
      961 gccgcgcgta cagcctcgat tgcctggctg acaagaggag gttcgagcgc atgaccgaca
     1021 agcagacttt cggccgtggc ggcgcgcacc gcggtccggc cgatgccgct caaggcgatg
     1081 cgggcttcga cgatcgcgcc cgcggccacg gccagcgtgg ccgcggcggc ggcgagcgcg
     1141 aaatcgccgc cgcggcgcga gacctcggca aaaccccagc cggtctgcgg cggcagtttc
     1201 ggcagcgcga tctcggtgac aatctcgcca gcgttgaggt cgacggtgag agcgtcgagg
     1261 aaaaagtcgc gcgccgccgt gatgcgtgcg gcggcgaccg acccgatgtg aagctcggcg
     1321 tccaagagca gcgccatcat cggtagttcg gcggcgggat cgccatgcgc caggctgccg
     1381 ccgatggtgc cgcggttgcg gatcgccaga tgcgccacat gcgtcatcgc gcaggagaga
     1441 accggcagat gccgcgcgat caccggcgag gtctcgagtt gatagtgccg cgtcagcgcg
     1501 ccgacgcgga tgtcggtcgc ggtctctgaa atgaacgcca ggctctcgat gcggttgatg
     1561 tcgatgagga tcgatgggcg cagcaagcgg aaattgagga gcggaacgag gctttgcccg
     1621 ccggcaatga tcttggcgtc gtcgccgcca tcggccaatg ccgccgccgc catgtcgacg
     1681 ctcgtggccg cgatatagtc gaacggcgcc ggcttcatcc gtcagcccta tccgtcagcc
     1741 atcgagcagc gccacgcagc gcgtccaccc cgcggaggcg gcttcgatct tcaccgggaa
     1801 gcagcacacc ctgaagccgg acggcggcag cttgtccagg ttggcgagct tctccatgtg
     1861 gcaatagccg atctcgcggc tcgccttgtg accctcccag atgatgctcg ggtcgcccgt
     1921 ctccgcgaac cgtttggcgg tgaacgagaa tggcgcatcc cagctccagg cgtcggtgcc
     1981 ggcgacgcgg acgccctgct tgagcagata aagcgtcgct tcgcggccca tgccgcatcc
     2041 cttgttgaga aacgaggggt cgccgtaggc ggcccccgcc gcggtattca cgagcacgat
     2101 gtcgagcggc ttgagcgtat ggccgatgcg gtcgagctcg cgcttcacgt catcggcctt
     2161 gcagacgtag ccgtcggcct tgttccggaa gtcgagcttg acgccggcgg agaggaacca
     2221 ctccagcggc acctggtcga tcttcaacga cggcttgccg ccatccatcg tactggcgaa
     2281 atgccatggc gcgtcgagat gcgtgccatt gtgcgtggag atcgtcacac gctcgaccgc
     2341 cgggccttcg ccgtccggca actgctcgac cttgaggccg gggaatacct gcgtgaactg
     2401 cttggcgcct tcgcggtgat cgacgtactc gatactcggc agcatgtacg gaggatccga
     2461 agcaatgccg gctttgaggg cgacggaaag atcgatgatc cgcatagagg gcctcccggc
     2521 cggtttgatg atcgtgcaaa agcggcgctc gctgccgtca caaaccaagg tacggtactt
     2581 tgcgtagcgg cggaggccgg agtcaacgcg cgccggcggc gtgccggaag ccgcggcgcc
     2641 tcccttgcgg accctgccgg ttctcgctaa ataggcaaaa tcgagttttc gggccgaacg
     2701 actaggccac gcagcgacga taagcgcgcc tgactgacga tctttcacca aaatctcgag
     2761 cgaaccgggc cgtgcctgtt gcacggctca agtcgtgatt cctgcagagg agtgtcccgt
     2821 gagcaacgga acagtgaaat ggttcaacgc gcagaagggt tacggattca tccagcccga
//
LOCUS       DATMQB010000484         3142 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_588239, whole genome shotgun sequence.
ACCESSION   DATMQB010000484 DATMQB010000000
VERSION     DATMQB010000484.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3142)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3142)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3142
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_588239"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            92..556
                     /locus_tag="VNY79_14030"
     CDS             92..556
                     /locus_tag="VNY79_14030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012041161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0005737 - cytoplasm [Evidence IEA];
                     GO_function: GO:0003824 - catalytic activity [Evidence
                     IEA];
                     GO_process: GO:0008150 - biological_process [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="secondary thiamine-phosphate synthase enzyme
                     YjbQ"
                     /protein_id="HWX73612.1"
                     /translation="MTGLSPIHSAPVEQIATAVLSVETAGEGFFEITRDVARFLEKID
                     ARDGALLLYLRHTSASLVIQENADPDVRTDLVTALKRVAPANAGWVHEVEGPDDMPAH
                     IKSMLNGLSLHVPVAGGTMALGTWQGIYVAEHRARPHRREVVLQFLGSCAKA"
     gene            607..1680
                     /locus_tag="VNY79_14035"
     CDS             607..1680
                     /locus_tag="VNY79_14035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008974114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HWX73613.1"
                     /translation="MVRKEIARSLAQRLVLLSGLGLVLLVSAALAEEPKLEVESYLIP
                     SADPGIQLYIRNKHPAGVTSYSADKILLYVHGATYPAETAFDLPLNGRSMMDYVAQQG
                     FDVYLVDVRGYGGSTRPPEMEKPAAENGPIVDTTVAVKDVGAAVSHILQKRGVTKINL
                     MGWSWGTAIMGMYTTEHNDRVNRLVLYAPLWIFTTRPLIGGTGPLGAYRTVTKEAAKQ
                     RWLNGVPESKKAELIPSGWFEQWADATWQTDPVGSKQTPPVVRAPNGVLQDLRTYWTA
                     GKAHYDPGDIRVPTLIVHAEWDADLPSDQAQAYFAKLTNAPYKRFVEIGEGTHSIIME
                     KNRMQFFREVMNFLNEANVLSLN"
     gene            1721..2398
                     /locus_tag="VNY79_14040"
     CDS             1721..2398
                     /locus_tag="VNY79_14040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020187763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003677 - DNA binding [Evidence IEA];
                     GO_process: GO:0000160 - phosphorelay signal transduction
                     system [Evidence IEA];
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HWX73614.1"
                     /translation="MSEAQSYRLLIADDHPLFRGALREAVTGLFSQVDIAEAGTFEEV
                     TDLAERGGDVDLILLDLSMPGVRGFSGLMYLRAQYPSLPVVVVSANDDPAVIRRCMEF
                     GASGFIPKTLGIDSLRQAVIRVLQGEVWTPPDVDLTRQSDAETAAMIARLATLTPQQV
                     RVLMMLSGGLLNKQIAYELGVSEATVKAHVSAILQKLGVESRTQAVIAAGKIEAGQWP
                     QTFPPAR"
     gene            complement(2414..>3142)
                     /locus_tag="VNY79_14045"
     CDS             complement(2414..>3142)
                     /locus_tag="VNY79_14045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012030146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HWX73615.1"
                     /translation="VSNAIKYTPAGRVLVGCRRRGSCLRIDVCDTGIGIPQAKRRAVF
                     KEFHRLDQGARVARGVGLGLSIVERIARVLGCEVALKSNMGRGSRFSVEVPRATAALA
                     TAPAAPKVAAGRLAGTIILCIDNEPAILDGMETLLGGWSCRVLKAADLPGALAVLDAS
                     DTEPDGLLVDYHLDGGNGVGAIAALRHRLQRDLSAILITADRSARVREEARAAGVHVL
                     NKPIKPASLRALMTQWRVQRVAAE"
BASE COUNT          555 a         1032 c         1036 g          519 t
ORIGIN      
        1 gccttcatgg gccgggtctg gcagcggctg gtcgaggcga tcacccaggc gcaaaaacaa
       61 gtgctgaaca aaagctagcg ccgggcgtgt cgtgaccggc ttgtccccca tccacagcgc
      121 acccgtagag cagattgcga ccgccgtcct atcggtcgag actgccggcg agggcttctt
      181 cgagatcacg cgcgacgtcg cccgcttcct ggagaagatc gatgcacgcg acggtgcgct
      241 gctcctctat ctgcggcaca cgtcggcttc gctcgtcatt caggagaatg ccgaccccga
      301 tgtgcgcacc gacctcgtga ccgcgctcaa gcgcgttgcc ccggccaacg ccggctgggt
      361 tcacgaggtg gaggggccgg acgacatgcc ggcgcacatc aaatcgatgc tcaatggact
      421 ttcgctgcat gtgccggtcg cgggcggcac gatggcgctc ggcacctggc agggtatcta
      481 tgtcgcggaa catcgggcgc ggccgcaccg gcgcgaggtg gtcctgcaat ttctcggctc
      541 ttgcgcaaag gcgtgagacg ggccagcatt ccagcaatcg gcaggtcttt ctcacaggag
      601 catgcaatgg tgcgaaaaga gatcgcgcgc tccctggcgc aacgattggt cctgctgtcc
      661 gggctcggcc tcgtcctgtt ggtctctgcg gcgctcgctg aagagccgaa gctcgaggtc
      721 gaaagctatc tcattccgtc cgccgatccg ggcattcagc tctacatccg caacaaacac
      781 cccgccggcg ttaccagcta ctctgcggac aaaattcttc tttacgtgca cggcgcaacg
      841 tatcccgccg aaacggcatt cgatctgccg ttgaacggcc gctcgatgat ggactacgtc
      901 gcgcaacagg gcttcgacgt ctatctcgtc gatgtgcgtg gctatggcgg ctcgacgcgg
      961 ccgccggaaa tggaaaagcc ggcggccgag aacggtccca tcgtcgacac caccgtcgcg
     1021 gtgaaggacg tcggcgccgc ggtcagccac attctgcaga agcgcggtgt caccaagatc
     1081 aacctcatgg gctggtcctg gggcaccgcg atcatgggca tgtacactac cgagcataac
     1141 gatcgcgtga atcggctggt gctctatgcg ccgctgtgga tcttcacgac gcggccgctc
     1201 atcggcggca ccggtccgct gggcgcctac cggacggtca cgaaggaagc ggcgaagcag
     1261 cgctggctga acggcgttcc cgagagcaag aaggcggagc tgatcccatc cggttggttc
     1321 gagcagtggg ccgacgcgac ctggcagacc gatcccgtcg gttcaaaaca gacccctccg
     1381 gtggtgcggg cgccgaacgg ggtgctgcag gaccttcgca cctactggac ggccggcaag
     1441 gcacattacg acccgggaga tatccgcgtt ccgaccctga tcgtccacgc cgagtgggac
     1501 gccgacctgc cgagcgatca ggcgcaggcc tatttcgcca aattgaccaa tgcgccctac
     1561 aagcgcttcg tcgaaatcgg cgagggcacc cactccatca tcatggagaa gaaccggatg
     1621 cagttcttcc gcgaagtcat gaatttcctg aacgaggcga atgtgctgag cttgaattag
     1681 ccggggcgcg gcaagcgccc tcgatcgacg gggtgatacc ctgagcgagg ctcaatccta
     1741 ccgcctcctg atcgcggacg atcatccgtt gttccgcggc gcgttgcgtg aagccgtcac
     1801 cggcttgttc agccaggtcg atatcgcgga agccggcacc ttcgaggagg tcaccgacct
     1861 tgccgagcgc ggcggcgacg tcgatctcat cctgctcgac ctgagcatgc caggcgtgcg
     1921 cggtttttcc gggctgatgt acctgcgcgc gcaatatccg agcctgccgg tcgtggtggt
     1981 ctcggccaac gacgatcccg ccgtgatccg ccgctgcatg gaattcggcg cctcgggatt
     2041 catcccgaag acgctcggca tcgactcgct gcgccaagcc gtgatccgcg tgctgcaggg
     2101 cgaggtgtgg acgccgccgg acgtcgatct cacgcgtcag tccgacgccg agaccgcagc
     2161 catgattgcc cggctggcga cgctcacgcc gcagcaggtc cgcgtgctga tgatgctgtc
     2221 ggggggactc ctcaacaagc agatcgccta cgagcttggc gtctccgagg cgacggtgaa
     2281 ggcccacgtc tccgccatcc tgcagaaact cggcgtcgag agccgcaccc aggcggtgat
     2341 cgccgccggc aagatcgagg ccggccaatg gccgcagacg tttcctcccg cgcggtagcg
     2401 aggaggatcg gcattactcc gcggctacgc gctgcacgcg ccattgcgtc atcagcgccc
     2461 gcaaggaagc gggcttaatc ggcttgttga ggacgtgcac gccggcggcg cgggcctcct
     2521 cgcgcacgcg agccgagcgg tcggcggtaa tcaggatcgc cgacaggtcg cgctgcaggc
     2581 ggtggcggag ggcggcgatg gcgccgacgc cgttgccgcc gtcgaggtgg tagtcgacga
     2641 gaagcccgtc gggctcggtg tcgctcgcgt cgagcaccgc cagcgcgccg gggaggtccg
     2701 ccgccttgag cacccggcag ctccaaccgc caagcagcgt ctccatgccg tcgaggatgg
     2761 ccggctcgtt gtcgatgcag aggatgatgg ttccagcgag acggccggcg gcaactttcg
     2821 gcgctgcggg cgcggtcgcc aaagcggccg tcgcgcgggg cacttcgacc gagaagcgcg
     2881 agccgcggcc catattcgat ttcagggcga cctcacagcc aagcacgcga gcgatacgct
     2941 cgacgatcga cagtccgagg ccaacgccgc gcgcgacgcg ggcgccctgg tcgaggcggt
     3001 ggaactcctt gaacacggcg cgccgcttcg cctgtgggat gccgatgccg gtgtcgcaga
     3061 catcgatgcg caggcacgag ccacggcgcc ggcaaccgac cagcacgcga cccgctggcg
     3121 tatatttgat cgcgttcgaa ac
//
LOCUS       DATMQB010000485         8230 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_928064, whole genome shotgun sequence.
ACCESSION   DATMQB010000485 DATMQB010000000
VERSION     DATMQB010000485.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8230)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8230)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8230
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_928064"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..874)
                     /locus_tag="VNY79_14050"
     CDS             complement(<1..874)
                     /locus_tag="VNY79_14050"
                     /EC_number="3.1.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018320155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003723 - RNA binding [Evidence IEA];
                     GO_function: GO:0004540 - RNA nuclease activity [Evidence
                     IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HWX73616.1"
                     /translation="MAGPELVFAPLGGIGEIGMNLSIYGFGDGPRRKWLIVDCGVSFG
                     SEEYLPGVDLILPDIRFLIEERRNIVGLVLTHAHEDHMGALIDLWPKLKVPLYATPFA
                     AALFEARRLSEPGAPQIPVNVAALNGRIELAPFTVDFVNVAHSIPESNALAIRTTLGT
                     VVHTGDWKIDATPLVGPPTDQTKLTALGDEGVLALIGDSTNAVREGRSPSEAEVAKTL
                     AELIRTAPARVAVTTFASHVGRIRAVAEAARLAEREVVVVGRAMERVVQVARETGYLD
                     GVQDFREMQAYGYLP"
     gene            complement(874..1641)
                     /locus_tag="VNY79_14055"
     CDS             complement(874..1641)
                     /locus_tag="VNY79_14055"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018259833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004077 - biotin-[acetyl-CoA-carboxylase]
                     ligase activity [Evidence IEA];
                     GO_process: GO:0036211 - protein modification process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HWX73617.1"
                     /translation="MRLSAAAVAAGYRLSAYDTLASTNAEALALARAGERGPLWIAAR
                     QQTAGRGRRGNAWVSPPGNLYATLLLTDPAPPDCAPQLSFVAVLALYDAIAACAPALR
                     QALALKWPNDLLCRGAKLAGILIEGERAADALAVAIGIGVNCESHPSQTPYPATDLKG
                     EGAAVAAEVLLEALTATMAQRLAQWRRGAGFPEIRADWIARAVGIGGDMRARLPDKEI
                     IGRGEGLDEHGRLLLRLPDGSLQAIAAGEVFPMTGVA"
     gene            complement(1641..3077)
                     /gene="nuoN"
                     /locus_tag="VNY79_14060"
     CDS             complement(1641..3077)
                     /gene="nuoN"
                     /locus_tag="VNY79_14060"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011503277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoN"
                     /protein_id="HWX73618.1"
                     /translation="MNPDLTASALVPLLPELLLGVGAMTLLILGVYRSEEAGRLIDAA
                     SVALLVIAGLIVLVLPEGRLVAFNGSFVVDDFARFLKILAMFGSAAAIVMSLDYARRE
                     REERFEYSVLILLSTLGMLMLISAADLIALYLGLELMSLPLYVVAASHRSSLRSTEAG
                     LKYFVLGALSSGMLLYGASLVYGFTGTVNFAGIAQSAAEGGPGLIFGLVFLFAGFCFK
                     VSAVPFHMWTPDVYEGAPTPVTAFFSAAPKVAGIAMFVRVAVMAFPGITTQWQEIVAF
                     VSVASMLLGSFAAIGQRNIKRLMAYSSIGHMGFALIGLAAGTSEGVQGVLVYMAIYVT
                     MTLGTFAVILSMRRAGGMVESIDQLAGLARTHPAMAFAMAMLLFSMAGIPPLAGFFAK
                     FYVFLAAIKAGLYVLAVIGVLASVVGAYYYLAIIKAMYFDEPAEGFVGMPAALKVVLG
                     VCALFNIVFFIYPAPLVGVASAAARSLF"
     gene            complement(3082..4587)
                     /locus_tag="VNY79_14065"
     CDS             complement(3082..4587)
                     /locus_tag="VNY79_14065"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018455082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit M"
                     /protein_id="HWX73619.1"
                     /translation="MASWPILSVVTFLPLAGALFIALLREDETGARNARWVALWTTLI
                     TFAISLILVWRFDSASADFQFVERRPWLGGTITYAMGVDGISLPFVILTTALMPISIL
                     ASWQAIQSRVREYMIAFLVLETLMVGTFCALDLVLFYLFFEGGLIPMFLIIGVWGGPR
                     RVYASFKFFLYTFAGSVLMLLAIMAIYWEAGTTDIPALLHHAFPRSLQIWAWFAFLAS
                     FAVKLPMWPVHTWLPDAHVEAPTAGSVILAAILLKMGGYGFLRFSLPMFPQASVELAP
                     LIYALSVVAIVYTSLVALMQEDVKKLIAYSSVAHMGFVTMGLFAMTVQGVAGGIFQMI
                     SHGIVSAALFLCVGVIYDRMHTREIAAYGGLVNRMPVYAFVFMVFALANIGLPGTSGF
                     VGEFLALIGTFRVNNWVATLATIGTILSAAYMLWLYRKVIFGRLEKPSLAAITDVGWR
                     EIVVLAPLLVLTIVFGLYPRPVLDISAVSVAQLIDNFNHAVGSVHSAALAR"
     gene            complement(4587..6623)
                     /gene="nuoL"
                     /locus_tag="VNY79_14070"
     CDS             complement(4587..6623)
                     /gene="nuoL"
                     /locus_tag="VNY79_14070"
                     /EC_number="7.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011315132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit L"
                     /protein_id="HWX73620.1"
                     /translation="MYEAIVFLPLLGAVIAGLITLVGAASRHPGASPPAPHDDHAAID
                     HASLDSEEEVARSTAGSQAAELVTTTLLVLSWVLSCVAFVDVGFNGHDARVPLFNFIT
                     SGDLKVDWALRIDPLTAVMLVVVTTISALVHLYSIGYMADDPHKPRFFSYLSFFTFAM
                     LALVTADNLAQLFFGWEGVGLASYLLIGFWFHKPEANAAAIKAFIVNRIGDFGFALGI
                     FAVFLMTGSINFDTIFAQAPDLVGKTLHYLSFDVDALTLICLLLFMGAMGKSAQFLLH
                     TWLPDAMEGPTPVSALIHAATMVTAGVFMVARLSPLFSLAPTAQAFVIVIGATTAFFA
                     ATVGLVQNDIKRIIAYSTCSQLGYMFVAMGTGAYSVGMFHLFTHAFFKALLFLGSGSV
                     IIAMHHEQDIRHMGGLWRKIPFTYATMFVGTLALTGFPFTAGYYSKDAIIEAADAASG
                     AAASYGFAMTVAAAALTSFYSWRLMFKTFHGAPHDRHHYEAAHESPIVMLVPLALLAI
                     GSIGAGWPFLHLFTGDGAVEFFRDSLKIGSDNKVLEEMEHLSFAVRVIPTVMMAGGLL
                     VAFQFYIRRPEIPERLAREQSVLYHFLLNAWYFDRIYDFLFVRPTLWLGRLLWKGGDG
                     FIIDGFGPDGVSARVLDVTRSVVRLQTGYLYHYAFAMLIGVAAFITWFMFAGGH"
     gene            complement(6639..6947)
                     /gene="nuoK"
                     /locus_tag="VNY79_14075"
     CDS             complement(6639..6947)
                     /gene="nuoK"
                     /locus_tag="VNY79_14075"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011510679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_process: GO:0042773 - ATP synthesis coupled electron
                     transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoK"
                     /protein_id="HWX73621.1"
                     /translation="MTIGLGHYLSVAAILFTLGIFGIFLNRKNIIIILMSVELILLAV
                     NINLVAFSAFLGDIVGQVYALIVLTVAAAEAAIGLAILVAYFRNRGSIAVEDVNLMKG
                     "
     gene            complement(6944..7555)
                     /locus_tag="VNY79_14080"
     CDS             complement(6944..7555)
                     /locus_tag="VNY79_14080"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018698217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008137 - NADH dehydrogenase (ubiquinone)
                     activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit J"
                     /protein_id="HWX73622.1"
                     /translation="MILQAIFFYLFAGVCIASAIMVIVVRNPVHSVLFLILAFVNAAG
                     LFMLMGAEFLAMILIVVYVGAVAVLFLFVVMMLDVDFAELRHGLLNYLPIGFVVGAVL
                     LAELLFVVGAWVIEPGVPKTITAPIAGDVSNTQALGEVLYTRYVYFFEAAGVILLVAM
                     IGAIVMTLQHKPDVRRQRVGEQLARTRASAIEVVKVRSGQGLP"
     gene            complement(7569..8057)
                     /gene="nuoI"
                     /locus_tag="VNY79_14085"
     CDS             complement(7569..8057)
                     /gene="nuoI"
                     /locus_tag="VNY79_14085"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020185822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA];
                     GO_function: GO:0051539 - 4 iron, 4 sulfur cluster binding
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit NuoI"
                     /protein_id="HWX73623.1"
                     /translation="MGLDQAARSIFLKEFVQAFLLSMRYFFKPKATLNYPFEKGALSP
                     RFRGEHALRRYPNGEERCIACKLCEAICPAQAITIEAGPRRNDGTRRATRYDIDMVKC
                     IYCGLCQEACPVDAIVEGPNFEFATETREELYYDKERLLANGDRWEREIAKNIALDAP
                     YR"
     gene            complement(8059..>8230)
                     /locus_tag="VNY79_14090"
     CDS             complement(8059..>8230)
                     /locus_tag="VNY79_14090"
                     /EC_number="1.6.5.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016734043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="NADH-quinone oxidoreductase subunit H"
                     /protein_id="HWX73624.1"
                     /translation="WFVLKAGFVFFMFAMVKAFVPRYRYDQLMRLGWKVFLPVSLAMI
                     VIVAGVLEIVRG"
BASE COUNT         1749 a         2595 c         2726 g         1160 t
ORIGIN      
        1 gcggcagata gccgtaggcc tgcatctcgc ggaaatcctg gacgccgtcg agataaccgg
       61 tctcgcgcgc gacttggacg acccgctcca tggcgcggcc gaccacgacg acttcgcgtt
      121 cggcgagccg cgccgcctcg gcgacggcgc gaatgcgccc gacatgggag gcgaaggtgg
      181 tgaccgcgac gcgcgccggc gcggtgcgga tgagttcggc gagcgtcttt gccacctcag
      241 cttcggaggg cgagcggccc tcacggacgg cattggtgga atcgccgatc agcgccagca
      301 cgccctcgtc gccgagcgct gtgagcttcg tttgatcggt cggcggcccg accaaaggcg
      361 tcgcatcgat tttccagtcg ccagtatgca ccaccgtgcc gagcgtggtg cggatcgcga
      421 gcgcattcga ttccgggatc gaatgcgcga cattgacgaa gtcgacggtg aacggcgcaa
      481 gctcgatccg cccgttcagt gccgcgacat tgaccgggat ttgcggcgcg ccgggctccg
      541 acagccggcg cgcttcgaac aaggcggcag cgaacggcgt ggcgtaaagc ggcaccttga
      601 gcttcggcca aagatcgatc agcgcgccca tatggtcttc gtgcgcgtgg gtgagcacga
      661 ggccgacgat gttgcggcgc tcctcgatca ggaaccggat gtccggcagg atgagatcga
      721 cgccgggcag gtattcttcg ctgccgaacg aaacgccgca atcgacgatc agccattttc
      781 ggcggggacc gtcgccaaag ccgtagatcg agagattcat cccgatctcg ccgatgccgc
      841 cgagcggcgc gaaaacgagc tccgggccgg ccatcaggca acgcctgtca tgggaaacac
      901 ttctcccgcg gcgatcgcct gaagcgagcc gtccggcagc cgcagcaaca ggcggccgtg
      961 ctcatcgagc ccctccccgc gcccgatgat ctccttgtcc ggaaggcggg cgcgcatgtc
     1021 accgccgatg ccgacggcgc gcgcgatcca atcggcgcgg atctcgggaa agccggcgcc
     1081 gcgccgccac tgcgcaagcc gctgtgccat ggtcgcagtc aacgcttcga gcaatacctc
     1141 ggccgcaacc gcggcgccct cgcctttcaa atcggtcgcc ggatagggcg tttgcgaagg
     1201 gtgactttcg caattgacgc cgatgccgat ggcaacggcc agcgcatccg cagcccgctc
     1261 gccctcgatg agaatgccgg cgagcttggc gccacggcag agaagatcgt tcggccattt
     1321 cagcgccaga gcctgccgca gcgccggcgc gcaggcagcg atcgcgtcat acagcgccag
     1381 cacggcgacg aacgaaagtt gcggcgcgca gtccggcggc gccggatcgg tcagcaacag
     1441 cgtggcgtag aggttgccgg gcggtgagac ccaggcattg ccgcggcggc cgcgcccggc
     1501 tgtctgctgc cgcgccgcga tccagagcgg accgcgctca cccgcgcgcg caagcgccag
     1561 cgcctcggca tttgtcgagg caagcgtgtc ataagccgac agacgatagc ccgccgccac
     1621 cgccgccgcc gaaagccgca ttagaacagc gaccgggcgg cggcgctcgc gaccccgacc
     1681 agcggtgccg gatagatgaa aaagacgatg ttgaacagcg cgcaaacccc gagcaccacc
     1741 ttgagtgcgg ccggcatgcc gacaaagcct tcggccggct catcgaaata catggccttg
     1801 ataatggcca gataataata ggcgccgacc acgctcgcca gaacgccgat cacggcgagc
     1861 acatagagcc ccgccttgat ggcggcgaga aatacgtaga acttggcgaa aaatcccgcg
     1921 agcggcggga ttccggccat cgagaacagg agcatcgcca tggcgaaggc catggccgga
     1981 tgggtgcgcg cgagcccagc gagctggtcg atggattcca ccatgccgcc cgcgcgccgc
     2041 atcgagagga tcacggcgaa ggtgccaagc gtcatggtga cgtagatcgc catgtagacg
     2101 agcacaccct gcacgccttc ggaggtaccg gcagcaaggc caatcagcgc gaaacccata
     2161 tggccgatgg aggaataggc catcaggcgc ttgatattgc gctggccaat ggccgcgaac
     2221 gagccgagca gcatcgaggc gacggaaacg aaggcgacga tttcctgcca ctgcgtggta
     2281 atgccgggaa aggccatgac ggcaacgcgc acgaacatgg cgatgccggc aaccttcggc
     2341 gcggcggaaa agaacgccgt caccggcgtg ggcgcgcctt catagacgtc cggcgtccac
     2401 atatggaacg gcacggccga gaccttgaag cagaagccgg cgaacagaaa gacgaggccg
     2461 aagatcaatc cagggccgcc ttcggcggcc gattgcgcga tgccggcaaa gttcaccgtg
     2521 ccggtgaagc cgtagaccag cgaggcgccg taaagcagca ttcccgacga gagcgcgccg
     2581 aggacgaaat acttcagccc ggcttcggtc gagcgcagcg aagacctatg gcttgccgcc
     2641 accacgtaaa gcggcaggct catcaattcg aggccgagat aaagcgcaat gagatcggca
     2701 gccgagatca gcatcagcat gccgagcgtc gacagcagga tgagcaccga gtattcgaac
     2761 cgctcctccc gctcgcgccg cgcgtagtcg agcgacatga cgatggcggc ggcggatccg
     2821 aacattgcca ggatcttgag gaagcgggca aagtcgtcga caacgaaact gccgttgaag
     2881 gcgaccagcc tgccctctgg cagcaccagc acgatgaggc cggcgatcac caggagcgcg
     2941 accgacgccg catcgatcag ccgccccgcc tcctcgctgc ggtagacgcc gaggatcagg
     3001 agcgtcatgg cgccgacgcc aagcagcaac tcgggcagca ggggaacgag cgccgacgcg
     3061 gtcaagtcag gattcatcgc ctcacctcgc cagcgccgcc gagtgaacgc tgccgaccgc
     3121 atgattgaaa ttgtcgatca gctgcgccac cgaaaccgcc gatatgtcga gcaccggccg
     3181 cgggtaaagg ccgaacacga tggtcaggac cagcagcggc gccaacacga cgatttcgcg
     3241 ccagccgacg tcggtgatcg ccgcgaggct cggcttctcc agcctgccga agatcacctt
     3301 gcggtagagc cacagcatgt acgcggcgga caggatggtc ccgatcgtcg ccagcgtcgc
     3361 cacccagttg ttgacccgga aggtcccgat cagggcgaga aactcgccga cgaatcccga
     3421 tgtgcccggc agcccgatat tggccagcgc gaacaccatg aagacgaagg cgtagaccgg
     3481 catgcggttg acgagcccgc cataggccgc gatctctcgc gtgtgcatgc ggtcgtagat
     3541 gacgccgacg cacaggaaca acgcggccga cacgatgccg tgcgagatca tctggaaaat
     3601 gccgccggcg accccctgca ccgtcatcgc gaacagcccc atggtgacga agcccatgtg
     3661 cgcgaccgac gaataggcga tgagcttctt cacgtcctcc tgcatcagcg cgaccagcga
     3721 ggtgtagacg atggcgacga ccgagagcgc gtagatgagc ggcgccagct cgaccgaggc
     3781 ttgcgggaac atcggcagcg agaagcgcag aaacccgtag ccgcccatct tcaggaggat
     3841 cgcggcaagg atcaccgaac cggcagtggg cgcctcgaca tgcgcgtcgg gcagccaggt
     3901 atggaccggc cacatcggca gcttgaccgc gaacgaggcg aggaacgcga accaggccca
     3961 gatctgcagc gagcgcggaa acgcatggtg caacagcgcc gggatgtcgg tcgtgccggc
     4021 ttcccagtag atcgccatga tggcgagcag catcagcacc gagccggcga acgtgtacag
     4081 gaagaacttg aagctggcat agacccggcg cgggccgccc catacgccga tgatcaggaa
     4141 catcgggatc aggccgccct cgaagaacag atagaacagc accaggtcga gggcgcagaa
     4201 cgttccgacc atcagcgtct cgagcacgag gaaggcgatc atgtattcgc gcacgcggct
     4261 ctggatcgcc tgccagctcg ccaggatcga aatcggcatc agcgccgtgg tcaggatcac
     4321 gaacggcagc gagatgccgt ctacgcccat ggcgtaggtg atggtgccgc cgagccaggg
     4381 gcgccgctcg acgaactgga agtcggccga ggcggaatcg aagcgccaga cgagaatgag
     4441 cgagatcgcg aaggtgatga gggtggtcca cagcgcgacc caccgcgcat tgcgcgcgcc
     4501 ggtctcgtcc tcgcgcagca gggcgatgaa cagcgccccg gcgagcggca ggaaggtcac
     4561 gaccgagagg atcggccagc tcgccatcag tggcctcccg cgaacatgaa ccaggtgatg
     4621 aaggcggcaa caccgatcag catggcgaag gcgtagtgat agagatagcc ggtctgcagc
     4681 cgcacgacgc tgcgggtcac gtcgagcacg cgggcggaca ccccgtcggg gccgaacccg
     4741 tcgatgatga acccgtcgcc gcccttccac aggagccggc cgagccacag cgtcgggcga
     4801 acaaagagga agtcgtagat ccggtcgaag taccaggcat tgagcaggaa gtggtagagc
     4861 acgctctgtt cgcgcgccaa ccgctccgga atctccgggc ggcggatata gaactggaag
     4921 gccacaagca atccgccggc catcatcacg gtaggaatga ccctgacggc gaacgaaagg
     4981 tgctccattt cctcgagcac cttgttgtcc gatccgatct tgagcgagtc gcggaagaac
     5041 tcgacggcgc cgtcgccggt gaacaggtgc aagaagggcc agccggcccc gatcgatccg
     5101 attgcgagca gagcgagcgg aacgagcatc acgatcgggc tctcatgcgc cgcctcgtag
     5161 tgatgccgat catgcggcgc gccatggaag gtcttgaaca tgagccgcca ggaatagaac
     5221 gacgtgagcg cggcggcagc aacagtcatg gcgaagccat agcttgcggc ggcgccgcta
     5281 gccgcgtcgg ccgcctcgat gatcgcgtcc tttgagtaat agccggcggt gaagggaaat
     5341 ccggtcagcg ccagggtgcc gacgaacatg gtggcatagg tgaacgggat tttgcgccac
     5401 agtccgccca tgtggcggat gtcctgctcg tggtgcatgg cgatgatgac cgagcccgag
     5461 cccaggaaca ggagcgcctt gaagaaggca tgggtgaaca ggtggaacat gccgaccgaa
     5521 taggcgcccg tgcccatggc cacgaacatg tagccaagct gcgagcaggt cgaataggcg
     5581 atgatgcgct tgatgtcgtt ttgcacgagg ccgacggtcg cggcaaagaa tgccgtcgtc
     5641 gcgccgatga cgatcacgaa cgcctgcgcc gtcggcgcca gcgagaacag cggcgagagc
     5701 cgcgccacca tgaacacgcc ggcagtcacc atggtcgccg catgaatgag cgccgacacc
     5761 ggggtcggtc cctccatggc gtcgggaagc caggtgtgca gcaggaactg cgccgatttt
     5821 cccatcgcgc ccatgaacag cagcaggcag atcaacgtga gggcatcgac gtcgaagctc
     5881 agatagtgaa gggtcttgcc gacgaggtcc ggcgcctggg caaagatggt gtcgaagttg
     5941 atcgacccgg tcatcaggaa gacggcgaag attcccagcg cgaagccgaa gtcgccgatg
     6001 cggttgacga tgaaagcctt gatcgccgcg gcattggcct cgggcttgtg gaaccagaag
     6061 ccgatcagca gatagctcgc gagccccacg ccttcccagc cgaagaacag ctgcgccaga
     6121 ttgtcggccg tcaccagcgc cagcatggcg aaggtgaaga acgacagata ggagaagaag
     6181 cgcggcttgt ggggatcgtc ggccatgtag ccgatcgaat agagatgaac cagcgccgag
     6241 atcgtcgtca ccaccaccag catcacggcg gtaagcggat cgatgcgcag ggcccaatcg
     6301 accttgaggt cccccgaggt gatgaagttg aacagcggga cgcgggcgtc gtgcccgtta
     6361 aagccgacgt cgacgaaggc aacgcaagag agcacccagg acagcaccaa cagcgtggtg
     6421 gtgacgagct cggcggcttg cgagccggcg gtcgatctgg cgacctcttc ttcgctgtcg
     6481 aggctcgcgt ggtcgattgc ggcgtgatcg tcatgcggcg ccggcgggct ggcgccggga
     6541 tggcggctcg ccgcgccgac cagcgtgatc aggccggcga tgacggcgcc gagcagcggc
     6601 aggaagacga tcgcctcata catcccgctg ctcatccgtc agcccttcat cagattgacg
     6661 tcttcgacag cgatcgagcc gcggttgcgg aaataggcga cgaggatggc gagcccgatc
     6721 gcggcttccg ctgccgcgac cgtgagcacg atgagcgcat agacctggcc gacgatgtcg
     6781 ccgagaaacg ccgagaacgc caccaggttg atgttgacgg cgagcaggat cagctcgacc
     6841 gacatcagaa tgatgatgat gttcttgcgg ttgagaaaga tgccgaaaat cccgagcgtg
     6901 aacaggatcg cggcgaccga cagatagtga ccgagcccga tggtcatggc aggccctgcc
     6961 ccgacctgac cttgaccacc tcgatggcgc tggcccgggt gcgcgccagc tgctcgccga
     7021 cccgctgccg ccggacgtcg ggcttgtgct gcagcgtcat cacgatggcg ccgatcatgg
     7081 ctacgagcag gatcacgccg gccgcctcga agaagtagac gtaacgggta tagagtactt
     7141 cgccgagcgc ctgcgtgttg ctgacgtcgc cggcgatcgg cgcggtgatg gtcttgggca
     7201 cgccgggctc gatcacccag gccccgacca cgaacaagag ctcggcgagc agcacggcgc
     7261 cgaccacgaa cccgatcggc agatagttga gcagcccgtg gcgcagctcg gcgaaatcga
     7321 cgtcgagcat catcaccacg aacaggaaca gtaccgcgac ggcgccgaca tagaccacga
     7381 tgaggatcat ggcgaggaac tcggcgccca tgagcatgaa caggccagcg gcgtttacga
     7441 aggcgaggat gaggaacagc accgaatgca ccggattcct gacgacgatg accatgatcg
     7501 ccgaggcgat gcacacgccg gcaaagagat agaagaaaat cgcctgcagg atcatgggcg
     7561 cgggcgtctc accggtacgg cgcgtcgagc gcgatgttct tggcgatctc gcgctcccat
     7621 cggtcgccgt tggccagcag gcgttccttg tcgtagtaga gttcttcgcg cgtctcggtg
     7681 gcgaattcga agttcggccc ctcgacgatc gcatcgaccg gacaggcctc ctggcacagc
     7741 ccgcaataga tgcatttgac catgtcgatg tcgtagcggg tggcgcgccg cgtgccgtcg
     7801 ttgcggcgcg ggccggcctc gatggtgatc gcctgcgccg ggcagatcgc ctcgcacagc
     7861 ttgcaggcga tgcagcgctc ctcgccgttc ggatagcgcc gcagcgcatg ctcgccgcgg
     7921 aagcgcggcg acagcgcgcc cttctcgaat gggtagttga gcgtcgcctt cggcttgaag
     7981 aagtagcgca tcgacagcag gaaagcctgc acgaactcct tgaggaagat cgaacgcgcg
     8041 gcctgatcta atcccatctc agcctcgaac gatttcgagc acgccggcaa cgatgacgat
     8101 catcgccagc gacaccggca gaaatacctt ccagccgagc cgcatcagct ggtcgtagcg
     8161 atagcgcggc acgaaggcct tcaccatggc gaacatgaag aacacgaacc cggccttgag
     8221 cacgaaccag
//
LOCUS       DATMQB010000486         6235 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2782175, whole genome shotgun sequence.
ACCESSION   DATMQB010000486 DATMQB010000000
VERSION     DATMQB010000486.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6235)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6235)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6235
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2782175"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1278)
                     /locus_tag="VNY79_14095"
     CDS             complement(<1..1278)
                     /locus_tag="VNY79_14095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011158454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0000166 - nucleotide binding [Evidence
                     IEA];
                     GO_function: GO:0004819 - glutamine-tRNA ligase activity
                     [Evidence IEA];
                     GO_function: GO:0005524 - ATP binding [Evidence IEA];
                     GO_process: GO:0006425 - glutaminyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--tRNA ligase/YqeY domain fusion
                     protein"
                     /protein_id="HWX73625.1"
                     /translation="MTIAETTVREAGQDFIRDVIRADLAAGRHKSVVTRFPPEPNGYL
                     HIGHAKSICLNFGVAEEFGGHCNLRYDDTNPTKEAQEYIDAIERDVRWLGFDWGEHLY
                     HASDYFEQLYAWAEHLIRAGKAYVDDQTQEEMRLTRGTLTEAGTDSPFRNRGAEENLD
                     LFRRMRAGEFPNGARVLRAKIDMASGNINLRDPVLYRILHAAHPRTGTRWCIYPSYDF
                     AHGQSDAIEGVTHSLCTLEFEDHRPLYDWLLDNLPVPSRPRQYEFARLNLSYTVLSKR
                     VLTEMVRGGHVAGWDDPRMPTLAGLRRRGVPPAAIRDFVKRIGVAKANSLVDMAMFEF
                     SVREHLNRTAQRRMAVLRPLKVVIENYPEGAGEELDAINHPEDPGAGTRRIRFGRELF
                     IERDDFLENPPKKFFRLAPGREVRLRYAYFITCR"
     gene            1528..2973
                     /gene="gltX"
                     /locus_tag="VNY79_14100"
     CDS             1528..2973
                     /gene="gltX"
                     /locus_tag="VNY79_14100"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011472899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009332 - glutamate-tRNA ligase complex
                     [Evidence IEA];
                     GO_function: GO:0004818 - glutamate-tRNA ligase activity
                     [Evidence IEA];
                     GO_process: GO:0006424 - glutamyl-tRNA aminoacylation
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HWX73626.1"
                     /translation="MTVVTRFAPSPTGFLHIGGARTALFNWLYARGRGGKMLLRIEDT
                     DRERSTQAAIEAILDGLSWLGIDWDGEAIYQFARAARHREVAEQLLAAGHAYRCYATP
                     EELAQMREAARREGRARLYDGRWRDRDPSEAPPGAKPAIRLKAPLTGETVIEDQVQGR
                     VVWQNENLDDLVLLRSDGTPTYMLAVVVDDHDMGVTHIIRGDDHLTNAARQKQIYDAL
                     GWTVPVMAHISLIHGPDGSKLSKRHGALGVDAYRALGCLPVALRNYLVRLGWSHGDHE
                     IFSTEEMIAAFDLPQIGRSPARFDFAKLESLNGHYIRTSDDQALLRAIEQLLPHLEGG
                     DKIRAKLTPRARQQWLEAMPSLKERAKTLIDLIDGAHFLFADRPIPLDDKARSVLSPE
                     ARGLLRDLEGELGAVEPWSTEATERAVRTFAERHGLKLGSVAQPLRAALTGRTTSPGI
                     FEVLAVLGKGESLARVADQANKVERQQPRAG"
     gene            3162..4469
                     /gene="gltA"
                     /locus_tag="VNY79_14105"
     CDS             3162..4469
                     /gene="gltA"
                     /locus_tag="VNY79_14105"
                     /EC_number="2.3.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009364374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0004108 - citrate (Si)-synthase activity
                     [Evidence IEA];
                     GO_process: GO:0006099 - tricarboxylic acid cycle
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HWX73627.1"
                     /translation="MDAKTGANIKTGKLTLGDKNWSFPLCDGTLGPQVIDISKLYGEA
                     GVFTYDPGFTSTASCESKITFIDGDEGVLLYRGYPIEDLAEHGDYLETCYLLLYGELP
                     TAAQKADFDDRVVHHTMVHEQMSRFFQGFRRDAHPMAVMVGVVGALSAFYHDSTDITD
                     PTQRMIASIRMIAKSPTLAAMAYKYSVGQPFMYPKNDLDYASNFLRMCFAVPCEEYKP
                     NPVLARAMDRIFILHADHEQNASTSTVRLAGSTGANPFACIAAGIACLWGPAHGGANE
                     AALKMLGEIGSVDRIPEYVKRAKDPNDSFRLMGFGHRVYKHYDPRAKIMQKTCHEVLR
                     ELGVNDPLLDVAMELERIALHDDYFVEKRLYPNVDFYSGITLRAMGFPTTMFTVLFAV
                     ARTVGWIAQWKEMIEDPHQKLGRPRQLYTGAPRREYQPISRRR"
     gene            complement(4514..5509)
                     /gene="thiL"
                     /locus_tag="VNY79_14110"
     CDS             complement(4514..5509)
                     /gene="thiL"
                     /locus_tag="VNY79_14110"
                     /EC_number="2.7.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006612778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0009030 - thiamine-phosphate kinase
                     activity [Evidence IEA];
                     GO_process: GO:0009228 - thiamine biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine-phosphate kinase"
                     /protein_id="HWX73628.1"
                     /translation="MAGPDQSPEERLIAQHFRPLATHPGAFGLADDAAVLSVPEGFDL
                     VVTTDGVIAGVHFFFDDAPADIARKALRMNLSDLAAKGAKPLGFVMAVALPESTDDAW
                     LAAFAAGLGEDAGRYGCPLLGGDTDHTPGLMSISITAFGAVPQSRMVQRSGARVGDSV
                     LVTGTIGDAALGLRLRGDRNLASRWRLTEAMAGHLLGRYLRPEPRTTLAEAVLSFASS
                     AMDVSDGLAGDLGKLCRASSLAADVDVAQVPLSDAAHTAIASRPTLLETLLTGGDDYE
                     IVLTVAQAKLQAFQAAARAARVPVTEIGRMRSGDGAQFTRQGKALVFARPAFSHF"
     gene            complement(5514..6041)
                     /gene="nusB"
                     /locus_tag="VNY79_14115"
     CDS             complement(5514..6041)
                     /gene="nusB"
                     /locus_tag="VNY79_14115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011473110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_process: GO:0006355 - regulation of DNA-templated
                     transcription [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HWX73629.1"
                     /translation="MTRAGARPAARKPRKANKRGAARLAAVQALYQMDLAGTGLNEIL
                     AEFQSHWLGGDVEGAQYRPAETAFFSDIVHGVVREQTRLDPQIDAALARGWPLKRIET
                     VLRAVLRAGAYELACRGDVPARVVTSEYVDVASAFVDAEETGMVNAVLDHLARQLRAG
                     EFTSASPSAGGGGGG"
     gene            complement(6043..>6235)
                     /locus_tag="VNY79_14120"
     CDS             complement(6043..>6235)
                     /locus_tag="VNY79_14120"
                     /EC_number="2.5.1.78"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_008969894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0009349 - riboflavin synthase complex
                     [Evidence IEA]"
                     /codon_start=2
                     /transl_table=11
                     /product="6,7-dimethyl-8-ribityllumazine synthase"
                     /protein_id="HWX73630.1"
                     /translation="HQSARGLMDIAIARALPLGNGIITVDTEAQALARARPEEQDKGG
                     DAARAALALVDIKRRLAGR"
BASE COUNT         1048 a         2115 c         2067 g         1005 t
ORIGIN      
        1 gcggcaggtg atgaaatagg cgtagcgcag gcgcacttcg cgccccggcg ccagacgaaa
       61 gaacttcttc ggcggattct ccagaaaatc gtcgcgctcg atgaaaagct cgcggccgaa
      121 acggatgcgc cgcgttcccg cgccgggatc ctcggggtga ttgatggcgt cgagctcttc
      181 gcccgcgccc tccggatagt tctcgatcac gaccttcagc gggcgcagca ccgccatccg
      241 ccgctgtgcg gtccggttca aatgctcgcg gacggagaat tcgaacatcg ccatgtcgac
      301 gaggctgttc gccttggcga cgccaatgcg cttgacgaaa tcgcggatcg cggccggcgg
      361 cacgccgcgc cggcgcagcc cggcgagcgt cggcatgcgc ggatcgtccc agccggcgac
      421 atggccgccg cgcaccatct cggtgagcac gcgcttcgac agcaccgtgt aggacaggtt
      481 gaggcgcgcg aactcgtatt ggcgcggccg cgaggggacc ggcagattgt cgagaagcca
      541 gtcgtagagc ggccgatggt cctcgaattc gagggtacag agcgaatgcg tgacgccctc
      601 gatggcgtcg gactggccgt gggcgaaatc gtagctcgga tagatgcacc agcgtgtgcc
      661 ggtgcgcgga tgcgccgcgt gcagaatgcg gtagagcacc ggatcgcgca gattgatgtt
      721 gcccgaggcc atgtcgatct tggcacggag cacgcgggcg ccgttcggga actcgcccgc
      781 gcgcatccgg cggaacaggt cgaggttctc ctcggcgccg cggttgcgga acgggctgtc
      841 ggtccccgcc tcggtcaggg tgccgcgggt gagacgcatc tcctcctgcg tctggtcgtc
      901 gacataagcc ttgccggcgc ggatcaggtg ctccgcccac gcatagagct gctcgaaata
      961 gtcggaggcg tgatagaggt gctcgcccca atcgaagccg agccagcgca catcgcgctc
     1021 gatggcatcg atatattcct gcgcctcctt ggtcgggttg gtgtcgtcgt agcgcaggtt
     1081 gcagtggccg ccgaactcct cagccacgcc gaaattgagg cagatcgact tggcatggcc
     1141 gatatggaga tagccgttcg gctccggcgg aaagcgggtg accacgcttt tgtgccggcc
     1201 cgcggccagg tccgcgcgaa taacgtcgcg gatgaaatcc tggccggctt cccgtactgt
     1261 cgtttcagcg atcgtcatgc agtgatcttc ggcacggcgc ggcgatggcg gtgcggcgcc
     1321 cggattgaac aaattgcccg gccgggtcaa gtgcggctgt tcaccttgcc gcactggcgt
     1381 aaatctaatc tggcgccgat tcctactatt gcaccactcg ctttgttggc ggccggcaga
     1441 gccccgcggc ctttctcggg agggaaaacc gtgtactacc tgccggacgc atccgtcgga
     1501 tgacgacaga gagatacgaa ggccacaatg accgtcgtca cccgctttgc cccctcgccc
     1561 accggctttc tgcatattgg cggtgcgcgc acagcgctgt tcaactggct ttacgcacgc
     1621 gggcgtggcg gaaaaatgct gctgcggatc gaggacaccg accgcgagcg ctcgacgcag
     1681 gcggcgatcg aggccattct cgacggactc tcctggctcg gcatcgactg ggacggcgag
     1741 gccatctatc aattcgcgcg cgcggcgcgg caccgcgagg tcgccgagca gctccttgcc
     1801 gccggccatg cgtatcgctg ctatgctact cccgaggagc ttgcgcagat gcgtgaggcg
     1861 gcgcggcgcg aaggccgcgc gagactctat gacgggcgct ggcgcgaccg cgatccaagc
     1921 gaggcgccgc cgggcgccaa gccggcgatc cggctcaagg cgccgctcac cggcgaaacc
     1981 gttatcgagg atcaggtcca gggccgcgtg gtctggcaga acgagaatct cgacgatctc
     2041 gtgctgctgc gctccgacgg gacgccgacc tacatgctcg ccgtcgtcgt cgacgaccac
     2101 gacatgggcg tgacccacat cattcgcggc gacgatcacc tgaccaacgc ggcgcggcag
     2161 aagcagatct acgacgcgct cggctggacg gtgccggtca tggcgcacat ctcgctgatc
     2221 cacggtcccg acggttcgaa gctttccaag cgccacggcg cactcggcgt cgatgcctac
     2281 cgcgctctgg gctgcctgcc ggtggcgttg cgcaactacc tggtgcggct cggctggagc
     2341 cacggcgacc acgagatctt ctcgaccgag gagatgatcg cggcgttcga tctgccgcag
     2401 atcggccgct cgccggctcg tttcgatttc gccaagctcg agagcctcaa tggccactac
     2461 atccgcacca gcgatgacca agcgctgctg cgggcgatcg agcagctgct gccgcatctc
     2521 gaaggcggcg acaaaattcg cgccaagctg acgcctaggg cgcggcagca atggctcgag
     2581 gccatgccga gcctgaagga acgcgccaag acgctcatcg atctcatcga cggcgcgcat
     2641 ttcctgttcg ccgaccggcc gattccgctc gacgacaagg cgcgcagcgt gctgtcgccg
     2701 gaagcacgcg ggctgctgcg cgatctcgag ggcgagctcg gcgcggtcga gccctggtcg
     2761 acggaggcga ccgagcgtgc cgtgcgcacg ttcgccgagc gccacggtct caagctcgga
     2821 agcgtcgccc agccgttgcg ggcggcgctc accggccgca cgacctcgcc cggcatcttc
     2881 gaggtgctcg ccgtgctcgg caagggcgag agcttggccc gcgtcgccga tcaggccaac
     2941 aaggtcgaac ggcaacaacc ccgcgccggg tagcgcccgc ggcgccatgc gctcgtcgct
     3001 ggcgctggct ggcgcgcgcc agcgccagag cttatcttgc agtgcacact gggttgcgct
     3061 aggccaatgc ggccggaaca gacaacaccg ccgacgcctg cttctcggcc gatcggcccc
     3121 gcagcgcgca gttacggccg tcagatatcg aggatgcgat catggacgcg aaaaccggcg
     3181 ccaacatcaa gaccggcaaa ctgacgctcg gcgacaagaa ctggtcgttt ccgctctgtg
     3241 acggcacgct cggtccgcag gtgatcgaca tcagcaagct ctacggcgag gccggcgtct
     3301 tcacctatga tcccggtttc acctcgaccg cgagctgcga atccaagatc accttcatcg
     3361 acggcgacga aggcgtgctg ctctatcgcg gatatccgat cgaggacctt gccgagcacg
     3421 gcgactatct cgagacctgc tacctcctgc tttacggcga gctgccgacc gccgcacaga
     3481 aggccgactt cgacgaccgc gtggtccatc acacgatggt ccacgagcag atgagccgct
     3541 tcttccaggg gttccggcgc gacgcccacc cgatggcggt gatggtcggc gtcgtcggcg
     3601 cgctctcggc cttctaccat gactccaccg acatcaccga tccgacgcag cggatgatcg
     3661 cctcgatccg catgatcgcg aaatcgccga cgctggcggc gatggcctac aaatactcgg
     3721 tcgggcagcc gttcatgtat cccaagaacg acctcgacta cgcgtcgaat ttcctgcgca
     3781 tgtgttttgc ggtgccctgc gaagagtaca agccgaaccc ggtgctggcc cgcgccatgg
     3841 accgcatctt catcctgcac gccgaccacg agcagaacgc ttcgacctcg acggtgcggc
     3901 ttgccggttc gaccggcgcc aatccgttcg cctgcatcgc cgccggcatc gcctgcctgt
     3961 gggggcccgc gcatggcggc gccaacgagg cggcactgaa gatgctcggc gagatcggca
     4021 gcgtcgaccg cattcccgaa tatgtcaagc gcgccaagga cccgaacgat tccttccggc
     4081 tgatgggttt cggccaccgc gtgtacaagc actacgaccc gcgcgccaag atcatgcaga
     4141 agacctgcca cgaggtgctg cgcgagctcg gcgtcaacga tccgctgctc gatgtcgcca
     4201 tggagctcga gcgcatcgcg ctgcacgacg actacttcgt cgagaagcgg ctctatccca
     4261 acgtcgattt ctattcgggg atcacgctgc gcgccatggg gtttccgacc accatgttca
     4321 ccgtgctgtt cgcggtcgcg cgcacggtcg gctggatcgc gcagtggaag gagatgatcg
     4381 aggacccgca ccagaagctc gggcgtcccc gccagctcta caccggcgcg ccgcggcgcg
     4441 agtatcagcc gatctcgcga cggcggtagt cgcgccggcg tccatttccg gcggcctttg
     4501 ccggcggcac aaatcagaaa tggctgaacg cggggcgcgc gaacacgagc gccttgcctt
     4561 ggcgcgtgaa ctgcgccccg tcgccggagc gcatgcggcc gatctcggtc accggcacgc
     4621 gcgccgcccg cgccgcggct tggaacgcct gaagcttcgc ctgcgctacc gtcagcacga
     4681 tctcgtagtc atcgccgccg gtgagtagcg tctcgaggag tgtcggccgc gacgcgatcg
     4741 ccgtgtgtgc ggcatcggag agcggcacct gtgcgacatc gacgtcggcg gcgagcgacg
     4801 aggcgcggca aagcttgccg agatcgccgg caagcccgtc ggagacatcc atcgcggacg
     4861 aggcaaagct cagcaccgct tcggcaaggg tggtgcgcgg ttcgggccgc agataacgtc
     4921 ccaggaggtg accggccatc gcctcggtga gccgccagcg cgaggccagg ttgcggtcgc
     4981 cacgcagcct aagcccgagc gctgcatcgc cgatcgtgcc ggtgaccaga acgctgtcgc
     5041 cgacccgcgc gcccgaccgc tgcaccatcc ggctttgcgg cacagcgccg aacgccgtga
     5101 tcgagatcga catcaggccg ggcgtgtggt cggtgtcgcc gccaagcaag gggcagccgt
     5161 agcgcccggc atcctcgccc aatccggcgg caaaggcggc cagccaggcg tcgtcggtgc
     5221 tctcaggcaa cgcgacggcc atgacgaagc cgagcggctt cgcgcctttg gcggcaaggt
     5281 cggaaagatt catgcgcagc gccttgcggg cgatgtccgc gggcgcgtcg tcgaagaaga
     5341 aatgcacgcc ggcaatgacg ccgtcggtgg tgaccacgag atcgaatcct tccggcacgc
     5401 tcaagaccgc ggcgtcgtcg gcgaggccga aggcgccggg atgggtggcg agtggccgga
     5461 aatgctgcgc gatcaggcgc tcctcgggcg attgatcggg gccggccacg tccctacccg
     5521 cctccgccgc cgcccgcgct gggcgatgcg ctggtgaatt ctcccgcgcg cagttgccgc
     5581 gcaaggtggt cgagcacggc attgaccatg ccggtttcct ccgcgtcgac gaaggcgctg
     5641 gcgacatcga cgtattccga cgtcaccacc cgcgccggca cgtcgccgcg gcaggcaagc
     5701 tcgtacgcgc cggcccggag caccgcgcgc aacacggtct cgatgcgctt gagcggccaa
     5761 ccacgcgcca gcgcggcgtc gatctgcgga tcgagccttg tttgctcacg tacgacgcca
     5821 tggacgatgt cgctgaagaa tgccgtctcg gccggccgat actgcgcgcc ctcgacatcg
     5881 ccaccaagcc aatggctttg gaactctgcc aaaatctcat tcaggccggt gccggcaagg
     5941 tccatctggt agagcgcctg gacggcggcg agccgcgccg cgccgcgctt gtttgccttg
     6001 cgcggcttcc ttgctgcggg tcttgcgccg gcgcgggtca tgtcatcgcc ccgccagccg
     6061 gcgcttgata tcgacgagcg ccagcgccgc gcgggccgca tcgccgccct tgtcctgctc
     6121 ttccgggcgg gcacgggcga gcgcctgcgc ctcggtgtcg acggtgatga tgccgttgcc
     6181 gagcggcagc gcacgagcaa tcgcgatatc catcagcccg cgcgccgact gatgc
//
LOCUS       DATMQB010000487         4676 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2783697, whole genome shotgun sequence.
ACCESSION   DATMQB010000487 DATMQB010000000
VERSION     DATMQB010000487.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 4676)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4676)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4676
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2783697"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            80..1320
                     /locus_tag="VNY79_14125"
                     /pseudo
     CDS             80..1320
                     /locus_tag="VNY79_14125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013850240.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology.
                     GO_function: GO:0016491 - oxidoreductase activity
                     [Evidence IEA];
                     GO_function: GO:0016651 - oxidoreductase activity, acting
                     on NAD(P)H [Evidence IEA]"
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
     gene            complement(1355..2566)
                     /locus_tag="VNY79_14130"
     CDS             complement(1355..2566)
                     /locus_tag="VNY79_14130"
                     /EC_number="3.1.1.103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018322226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016787 - hydrolase activity [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase domain-containing protein"
                     /protein_id="HWX73631.1"
                     /translation="MNDQPKTVSPASQVAPIGSPEETGLSPAGLAKLTAIMQREIDAG
                     RLPGVSMMIARGGKVGYRRDLGVLRPGGPIMPGDAIFRIYSMTKPIVSVALMMLVEDG
                     RLFIADPVAKYLPEFADPKVGVEKDGKLELVPAKRPITVQDLLRHTSGLTYEFTGESA
                     VQRLYGKARLFRDLPNAELVAEIAKLPLLEQPGVAWHYSHSTDVIGRIIEVISGQPLG
                     AFLRERIFTPLGMSDTGFFAPADTHERLAEAFANDPDTGAAVELINVRAAPRLEMGGG
                     GLVSTMDDYARFLLMLYRGGTLGSARILGRKTIAFMTADHLGPEVRIGTRFLLAPGHG
                     FGLGFAVRRDAGMAPTPGTVGEYFWGGIAGTAFWIAPQEELIALMMIQAPGQRDYYRQ
                     LFRFLAHAALA"
     gene            2700..3539
                     /locus_tag="VNY79_14135"
     CDS             2700..3539
                     /locus_tag="VNY79_14135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018897600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0071949 - FAD binding [Evidence IEA];
                     GO_process: GO:0055072 - obsolete iron ion homeostasis
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="siderophore-interacting protein"
                     /protein_id="HWX73632.1"
                     /translation="MTQLSQTAERTVRRVRHDTKLRLLEVKSAGRITPKMLRITVGGD
                     ELAGFVSAAHDDHMKLFFPQPGQAKPVLPTSSPNGPVYPADAPKLAARDYTPRRYDAA
                     ARTLAIDFVLHGDGPATSWAAQARPGDFLGVGGPRGSFIVPDDFDWYLLAGDETALPA
                     IGRRLEELPRGARTVVIVEVPDAGEEQRFDTRSRLDVQWLHRGDAAASEKSRSQSLLH
                     DAVAGLSFPPGDGYAWVAAEAATAKALRRHLVDERGLRKDRVKAAAYWKHGAVAVHET
                     YDD"
     gene            3653..4093
                     /locus_tag="VNY79_14140"
     CDS             3653..4093
                     /locus_tag="VNY79_14140"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73633.1"
                     /translation="MRGAVAWILGIALAANGFVMLGAPAAWYAAVPGVAATGPFNAHF
                     IRDIGVAYFLCGASLPWFAISPAARPAAMIGAAFLALHAAVHLWDAAAGREHLHQLLI
                     DLPPVFLPPVLAVWIVWRPLGRGPIANKGADHDQMASAAAARRV"
     gene            4053..4607
                     /locus_tag="VNY79_14145"
     CDS             4053..4607
                     /locus_tag="VNY79_14145"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73634.1"
                     /translation="MIKWLLRRRLAAFERAWKYDASYMHEVLDADPSALMAFSKVASL
                     GRYHKDAPLAAYHAVRIVGTMAEDCGPCTQLTVDMAVRAGVDPAVLRAVVSREFSAMP
                     ADVSLAVRFAEASLRHAAEADDLRKEVVRRWGKRALISLAFAITGARIFPTVKYAMGH
                     GRACTRVTVAGESRPVLRELTRAA"
BASE COUNT          771 a         1537 c         1568 g          800 t
ORIGIN      
        1 aacgagttcc gacgcgcggc tcaccattcg ggcgcgtgcg aacgatgcag gccgatcata
       61 ccggcaagtg gaggacttca tgaacggtcg cgcgtccatt ccaacgttgc gcatcggttt
      121 gatcggcagc ggcttcatcg ccaattttca ccttcaggcg ctcctgtccg tgcgtcatgt
      181 caccgtgtcg ggagtctaca gtccgaccgc cgccaatcgc gaggcgattg ccgcaaaagc
      241 caatgcgctc gagctcggcc cctgccggcc gttcccgtcg ctcgaggcga tgctgatttc
      301 cggcgaggtc gacgccgtat ggatcggcgt gccgaatttc gtccggctcg acaccatgcg
      361 cgagatccat cgcctggtga aggccggatg ggcgaagctc gtcggcgtcg catgcgaaaa
      421 acctctcggc cggacgctcg ccgaggcgcg ggagatgctg cgcctcgccg aagatgcgaa
      481 gctcatgcac ggctacctgg aaaaccaggt gttctcgagc gccgtccagc gcggcaagga
      541 catcgtgtgg cgccgcgccg ttccggtctg tggccgtccc tatctggcgc gcgccgccga
      601 ggagcatagc gggccgcaca tgccgtggtt ctggcaggcg cagcggcagg gcggcggcgt
      661 cctttccgac atgacctgtc acagcgtcga ggtgggccgt tttctgctga gcaggcccgg
      721 tgcgccacgc accgacctta agctggtcag cgccagcgcc acggtcggca atctgaaatg
      781 gacgcggccc gaatacgtca cgcggctcaa gaacatgatg ggcgccgacg tcgactacgc
      841 gtgcggccgg ccgaggattt tgcgcgcggc gcgctcacct tccgcgatgc cgagggacat
      901 gaagtgatgg tcgaagcgac caattcgtgg gcttatgtcg gggccggcct gcgcatcctg
      961 atcgagctcc tcggcccgga atattcgatg gagttctcct cgctcaacac cggcctgaaa
     1021 gtatttttgt cgcgcgacgt gaccggcggg cagggcgagg acctggtcga gaagcagaac
     1081 gccgagcagg gcctgatgcc cgtggtggag aacgagccgg acatctacgg ctatatcggc
     1141 gaggaccggc acatggtcga ggcgttccgc caccggcgcc agccgatgga gaccttccac
     1201 gacggcgtcg ccgtcgccga gatgctcatg gcgctctatc gctcggccga gatcggccag
     1261 accgtgcggc tgccgacgcc cgagctcgaa acctacgtgc cgccggtggc gcgctcctga
     1321 gcgcgccgtt gcttcgcgcc aggaccagct tccactacgc gagcgcggcg tgcgccagaa
     1381 agcggaagag ctggcggtag tagtcgcgtt ggccgggggc ctggatcatc atcagggcga
     1441 tcagttcctc ctgcggcgcg atccagaacg ccgtgccggc gatgccgccc cagaagtatt
     1501 cgcccacggt ccccggcgtc ggcgccattc cggcatcacg acgcacggcg aaaccgaggc
     1561 cgaagccgtg gcccggcgcc agcaggaaac gcgtcccgat gcgcacctcc gggccgaggt
     1621 gatcggcggt catgaacgcg atcgtcttgc ggccgaggat gcgcgccgag ccgagcgtgc
     1681 cgccgcgata aagcatcagc aggaaacgcg cgtagtcgtc catcgtcgag acgagcccgc
     1741 cgccgcccat ttcgaggcgc ggcgctgcgc gcacgttgat gagttctacc gccgccccgg
     1801 tatcggggtc gttcgcgaac gcctcggcga gccgctcgtg cgtgtcggca ggcgcgaaga
     1861 agccggtatc gctcatgccg agcggcgtga aaattcgctc gcgcagaaac gcgcccaaag
     1921 gttggcccga tatgacctcg atgatgcggc cgatgacgtc ggtggaatgg ctgtaatgcc
     1981 aggccacgcc cggctgctcg aggagcggca gcttggcgat ttcagcgaca agctcggcgt
     2041 tggggagatc gcggaacagc cgcgccttgc cgtagagacg ctgcacggcc gattcgccgg
     2101 taaactcgta tgtcagtccc gacgtatggc gcagcagatc ctggaccgtg atcggccgtt
     2161 tggctgggac cagttcgagt ttcccgtcct tctcgacgcc gaccttcggg tcggcgaatt
     2221 ccggcaggta cttcgccacg gggtcggcga tgaacagccg tccgtcctcg accagcatca
     2281 tgagcgcgac cgagacgatc ggcttggtca tcgaatagat gcggaagatc gcgtcgccgg
     2341 gcattatcgg gccgcccggc cgcagcacgc cgaggtcgcg gcgatagccg accttgccgc
     2401 cccgcgcgat catcatcgaa actcccggca agcggccggc gtcgatttcg cgctgcatga
     2461 tcgcggtcag cttggcgagg ccggcaggcg acagcccagt ctcttccggg gaaccgattg
     2521 gcgcgacctg tgacgcaggc gaaacggttt tcggttgatc gttcatggtc gatcccgatg
     2581 ttggttgtca gggcgcctga acactgtccc agtcgaaagt ttcgcgcaat actcttgtga
     2641 aagtcgcggg ttcgcccaag tagccggagg gggcgcggaa ttcacgtgaa aggtacggaa
     2701 tgactcaatt gtctcaaacc gcggaacgca ctgtgcgccg cgttcgccac gacaccaagc
     2761 tacgcctcct ggaagtgaag agcgcaggcc ggatcacgcc gaagatgctg cgcatcacgg
     2821 tcggagggga cgagctcgcc ggcttcgtca gcgccgcgca tgacgatcac atgaaactct
     2881 tcttccccca gccgggacag gccaagccgg tgctgccgac ctcgagcccc aacggtccgg
     2941 tgtatccggc cgatgcgccg aagctggcag cgcgcgacta cacgccgcgc cgctacgatg
     3001 ccgcggcaag aacgttggcg atcgatttcg tcctgcacgg cgatggcccg gcaacgtcgt
     3061 gggcggcgca agcacggccc ggagattttc tcggcgtcgg cggcccgcgc ggctcgttca
     3121 tcgtgcccga cgatttcgac tggtatcttc tcgccggcga cgaaacggca ttgcctgcga
     3181 tcggccgccg cttggaggag ctgccgcggg gtgcgcgcac tgtcgtgatt gtcgaagtcc
     3241 ccgacgctgg cgaggagcag cgtttcgaca cgcgcagccg cctcgacgtg caatggctgc
     3301 atcgcggcga cgccgccgcg tccgagaaaa gccgaagcca atcgcttctg catgatgcgg
     3361 tcgccggcct gagttttccg cccggcgacg gctatgcctg ggtcgccgcc gaggcagcga
     3421 ctgccaaggc cctgcgccgg catctcgttg acgaacgcgg gttgcgcaaa gaccgggtga
     3481 aagcggccgc ctattggaag cacggcgccg tcgccgtgca tgagacctac gacgactgag
     3541 gcgcggcggc ggtccagttc cacggaggcc tcaagccgcg cgtatccacc cgccggcacg
     3601 atgtcacaaa cggggcccct acctcgtctt agtgccaaag gaggtggatg acatgcgcgg
     3661 tgctgtcgcc tggattctcg gaatagctct cgcggccaac ggcttcgtga tgcttggggc
     3721 acctgctgcc tggtatgccg cggtccccgg cgttgccgcc accggcccct tcaacgccca
     3781 tttcatccgc gacatcggcg tcgcttattt tctctgcggc gcgtcgttac cgtggttcgc
     3841 catctctcca gcggctcggc cggcggcaat gatcggcgca gcgtttctcg cccttcacgc
     3901 ggccgtccat ctttgggatg ccgcggccgg gcgggagcac ctgcatcaac tgctcatcga
     3961 cctcccgcca gtgtttctgc cgccggtcct ggcggtctgg atcgtctggc ggccgctcgg
     4021 ccgcggcccg atcgcaaaca agggagcaga ccatgatcaa atggcttctg cggcggcggc
     4081 tcgccgcgtt tgagcgcgcc tggaaatatg atgcaagcta catgcacgaa gtgctcgatg
     4141 cagatccgtc ggcgctgatg gcgttcagca aggtggccag cctgggccgc tatcacaagg
     4201 acgcgccgct cgccgcgtat catgcggtca ggatcgtcgg cacaatggcc gaggattgcg
     4261 ggccatgcac gcagctcacg gtcgacatgg ccgtgcgcgc cggagtcgat ccggcggttc
     4321 tgcgggccgt ggtgtcgcgg gagttttctg cgatgccggc cgacgtttcc ttggcggtgc
     4381 gtttcgccga ggcgagcctg cgtcacgcgg ccgaagcgga tgacctgcgc aaagaggtgg
     4441 tccgccgatg gggcaagcgt gcgctgatct cgctcgcttt cgccatcacc ggcgcccgca
     4501 tcttcccgac ggtgaaatac gccatgggcc acgggcgcgc ctgcacccgc gtgaccgtcg
     4561 ccggcgagtc gcggccggtg cttcgtgaac tgacccgagc ggcatgagcg cgccggccga
     4621 acgcagcccg gtcgaatctt tcgaggccca tcgaagcgct ttgacgggtc tcgcct
//
LOCUS       DATMQB010000488         3120 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4638117, whole genome shotgun sequence.
ACCESSION   DATMQB010000488 DATMQB010000000
VERSION     DATMQB010000488.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3120)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3120)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3120
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4638117"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1560)
                     /locus_tag="VNY79_14150"
     CDS             complement(<1..1560)
                     /locus_tag="VNY79_14150"
                     /EC_number="2.4.-.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009734936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016757 - glycosyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="transglycosylase domain-containing protein"
                     /protein_id="HWX73635.1"
                     /translation="MALRRAGRKRGGDDARLNLRLRPQDRTSGPQQGRGSVLRPRRAA
                     PPARETRKSGRGGGGRGRGKGRSLIGRCLYWSVVLALWAAIGAVGDLVWVGIHLPPIQ
                     SLEIPKRPPSVLILGLNGATLATRGDMGGAAVPLRELPDYVPKAFVAIEDRRFYSHHG
                     VDPWGILRAIVHDVLRRGAAQGGSTITQQLAKNLFLTQERTVSRKLQELALAFWLEHK
                     FSKAEILELYLNRVYFGAGAYGIEGAAQRYFGKSARQLTLAEAALLAGLVQSPSRLAP
                     SHNPDGAERRARVVIAAMADEKLIGEGAAKLALARPARAVKPSAAGSVNYVADWVMDA
                     VDDLIGRFDQDIVVETAIDPALQNAAERALAETLTQKGEKLAVGEGALVAMTPDGGVR
                     ALVGGTSYSESQFDRAVAAKRQPGSAFKPFVYLTALEHGLTPDTVREDGPITVKGWRP
                     ENYEHEYLGPVTLAQALANSLNTVAVRLTLEFGPPAVIRTAYRLGINSLLQPNASIAL
                     GTSEVSPIELVS"
     gene            complement(1680..>3120)
                     /locus_tag="VNY79_14155"
     CDS             complement(1680..>3120)
                     /locus_tag="VNY79_14155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011438934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HWX73636.1"
                     /translation="TSKTEAETVLRRMNEAGVLGEFVRAFGRVVAMMQFNMYHHYTVD
                     EHLLRCIGALNEIEQGGNREVALASELMQTIQPRHRTLLLVALFLHDIAKGRVEDHSI
                     AGARIARRFCPRLGLSAAETELVAWLVEVHLVMSTVAQSRDLSDRKTIENFAAVVQSL
                     ERMKLLYILTVADIRAVGPGVWNGWKAQLLRTLYYETEPVLTGGFSEVNRAERVAQAK
                     AEFRAEIGDWPADALDAYIARHYPAYWLKVDLPHKVLQARFVRATESDGRRLATSVGF
                     DAARGVTELTVYAPDHPWLLSIIAGGCALAGANIVDAQIYTTTDGLALDTIAVSREFE
                     RDEDEARRAARIGDAIEKAVRGEIKLPEVVAKRAPAKGRLKAFAIEPEVTINNQWSHR
                     YTVVEVTGLDRPGLLYELTGTLSKLNLNITSAHVATFGERVVDVFYVTDLLGEKIGSP
                     TRQAAIKRPLLALLAAPGAEGRPMREAAG"
BASE COUNT          480 a         1078 c         1076 g          486 t
ORIGIN      
        1 ggagacaagc tcgatcggcg agacttccga ggtgccgagc gcgatcgagg cattgggctg
       61 cagcagcgag ttgatgccga gccggtaggc ggtgcgaatg accgccggcg gcccgaactc
      121 caaggtcagg cgcacggcga cagtgttgag cgaattggcg agcgcctgcg ccagggtcac
      181 cgggccgaga tattcgtgct cgtaattttc cggccgccag cccttcaccg tgatcggccc
      241 gtcctcgcgc accgtgtcgg gcgtgagccc gtgctcgagc gcggtgagat agacgaacgg
      301 cttgaacgcc gagccgggct ggcgcttggc ggcgacggcg cggtcgaact ggctctccga
      361 atagctggtg ccgccgacga gcgcgcgcac gccgccgtcc ggcgtcatgg cgacgagcgc
      421 accttcgccg acggcgagct tctcgccctt ctgcgtcagc gtctcggcga gcgcgcgctc
      481 ggccgcgttc tgcagtgcag gatcgatcgc ggtctccacc acgatgtcct ggtcgaagcg
      541 gccgatcagg tcgtcgaccg cgtccatcac ccagtcggcg acgtagttga ccgaaccggc
      601 cgcactcggc ttgaccgccc gcgccgggcg ggcgagcgcg agcttggcgg cgccctcccc
      661 gatcagcttc tcgtcggcca tggcggcaat gacgacgcgc gcgcggcgct ccgccccgtc
      721 gggattatgg ctcggcgcca gccgcgacgg ggactgcacg aggcccgcca gcagcgccgc
      781 ttcggcgagc gtcaactgcc gcgccgattt gccgaagtag cgctgcgccg ccccttcgat
      841 gccgtaggcg ccggcgccga aatagacgcg gttgagataa agctcgagaa tctccgcctt
      901 gctgaatttg tgctcaagcc agaacgcgag cgccagctcc tgcagcttgc gcgaaaccgt
      961 gcgctcctgg gtcaggaaca gattcttggc gagctgctgg gtgatggtcg agccgccctg
     1021 cgccgcgccg cgccgcagca cgtcgtggac gatggcgcgc aggatccccc acggatcgac
     1081 gccgtgatgc gaatagaagc gccggtcctc gatcgcgacg aacgccttgg gcacgtagtc
     1141 cggcagttcg cgcagcggta ctgcggcgcc gcccatgtcg ccgcgcgtcg cgagcgtcgc
     1201 cccattgagc ccgaggatga ggaccgacgg cggccgcttg ggaatttcga gcgactggat
     1261 cggcggcaga tgaatcccga cccagacgag atcgccgacg gcaccgatgg ccgcccacaa
     1321 cgcgagcacg acgctccaat aaaggcagcg gccgatcaga gaacggccct tgccgcggcc
     1381 acgaccgccg ccgccccttc cgcttttgcg ggtttcgcgc gccggcgggg cagcgcgccg
     1441 cgggcgcaga acgctccccc gcccctgctg cgggccgctg gtgcggtcct gcgggcgcag
     1501 ccgcaagttg aggcgtgcgt cgtcgccacc acgcttgcgg ccggcccgtc gcaacgccat
     1561 gtttccgtcc ccgcgctgaa aacgcgcagc ggcgacggta gggcgcgcgg tttaaagggg
     1621 cgttacctgt cctccccgac gcccgcgccc tcccgcaatg gcttacacta agagggaaac
     1681 tatcccgccg cctcgcgcat cggcctgccc tcagcgccgg gcgcagccag cagcgccagc
     1741 agcgggcgct tgatcgccgc ctggcgcgtt ggcgagccga ttttctcgcc gagaaggtcg
     1801 gtgacataga acacgtcgac cacgcgttcg ccgaaggtcg caacatgcgc ggaggtgatg
     1861 ttgaggttga gcttggacag cgtcccggtc agctcataga ggaggccggg gcggtcgaga
     1921 cccgtcacct cgacgacggt gtagcggtga gaccattggt tgttgatggt cacctcgggt
     1981 tcgatcgcga aagccttgag ccgccctttc gccggggcgc gcttggccac cacctcgggc
     2041 agcttgatct cgccgcgcac cgctttctcg atggcatcgc cgatgcgcgc ggcgcgccgg
     2101 gcctcgtcct cgtcgcgctc gaactcgcgc gagactgcga tggtatcgag cgcaagcccg
     2161 tcggtcgtgg tgtagatctg ggcatcgacg atgttggcgc cggcgagcgc gcagccgccg
     2221 gcaatgatcg agagaagcca aggatggtcg ggggcgtaca ccgtcagctc ggtgacgccg
     2281 cgcgcggcat cgaagccgac gctggtcgcg agccgcctgc cgtccgactc ggtcgcgcgc
     2341 acgaagcgcg cttgcagcac cttgtggggc aggtcgacct tgagccagta ggccggatag
     2401 tggcgggcga tgtaggcgtc gagcgcgtct gccggccaat cgccgatctc ggcgcggaat
     2461 tcggccttgg cctgcgccac gcgctcggcg cggttgacct cggagaagcc gccggtcagc
     2521 accggctcgg tctcgtagta gagcgtgcgc agcagctgcg ccttccatcc gttccatacc
     2581 cccggcccca ccgcgcggat gtccgccacg gtgaggatgt agaggagctt catgcgctcc
     2641 agcgactgca ctacggcggc gaagttctcg atcgtcttgc ggtcggagag gtcgcgcgac
     2701 tgcgccaccg tcgacatgac gagatgcacc tcgacgagcc aggccaccag ctcggtctcc
     2761 gccgcgctca agcccagccg ggggcaaaac cggcgggcga tgcgcgcccc ggcgatcgag
     2821 tgatcttcga cgcggccctt ggcgatgtcg tgcaggaata gcgcgaccag gagcagcgtc
     2881 cggtgccgcg gctggatcgt ctgcatcagc tcgctcgcca gcgcgacctc gcgattgccg
     2941 ccctgctcga tctcattgag cgcgccgatg cagcgcagca gatgctcgtc caccgtatag
     3001 tggtggtaca tgttgaactg catcatcgcc acgacgcggc cgaaggcgcg cacgaattcg
     3061 ccgagcacgc cggcctcgtt catgcgccgg agcaccgtct ccgcctcggt cttcgaggtc
//
LOCUS       DATMQB010000489         8373 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4316306, whole genome shotgun sequence.
ACCESSION   DATMQB010000489 DATMQB010000000
VERSION     DATMQB010000489.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 8373)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8373)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8373
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4316306"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..2322)
                     /locus_tag="VNY79_14160"
     CDS             complement(<1..2322)
                     /locus_tag="VNY79_14160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015598088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_component: GO:0016020 - membrane [Evidence IEA];
                     GO_function: GO:0022857 - transmembrane transporter
                     activity [Evidence IEA];
                     GO_process: GO:0055085 - transmembrane transport [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter permease subunit"
                     /protein_id="HWX73637.1"
                     /translation="MRISHFFIDRPIFAAVVSIIFVILGGVAFARLPVAQYPEIAPPV
                     INVSGQYPGASAEVVASTVVTPLEQQINGVENMLYMYSNSTADGRFSIQVSFDLGTNL
                     DIAQVQVQNRVSIAQPRLPADVRNIGVTVTKASPDLMMVVHLFSPDKSRDSLFISNYA
                     TLELTDALTRVDGVGSISVFGSRDYSMRIWLDPDRLQSLGLTATDVTSALQGQNIQVA
                     SGVLDQPPVAHPGAFQIAVQTLGRLADPDEFGTIVVKQTPGAVVRLKDVARVELAALD
                     YSSNSYLDHDPAVALAIFQRPGSNALETAQGVSRLMVELAKRFPPGIKYAIVYNPTQF
                     IQESVNAVVETIGEAIVLVVLVVIVFLQTWRAAIIPLVAIPVSLIGTFFFMSAFGFTL
                     NNLSLFGLVLAIGIVVDDAIVVVENVERNISEGLAPREAAIKSMNEVGSALIAIALVL
                     CAVFVPSVFITGISGQFYRQFALAIAGATVISLIVSLTLSPAMCALLLKPHDPTHRDR
                     WWERPIHAFFRAFNWGFGGVAVGISWLATRTVRRAAIMFVIYLVFLGFGLNQFRQTPV
                     GFIPQVDGGYVILVVQLPPGASLARTDAVQQRALDIALEVPGIAHGANIVGFSGATFT
                     NAPNSGAIFLVLDPFEKRARHPEQSARAIQAELNRRMSKVQDAFVIAALPPPVRGIGT
                     AGGFRMMIEDRAGRGSAALQQAAVAMMVRASQTPGVAQVFTLFETSTPQVYLDIDRTK
                     AQLLGINVQDVFNALQVFLGSAYVNDFNLFGRTF"
     gene            complement(2358..3557)
                     /locus_tag="VNY79_14165"
     CDS             complement(2358..3557)
                     /locus_tag="VNY79_14165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013947957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005215 - transporter activity [Evidence
                     IEA];
                     GO_process: GO:0006810 - transport [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="efflux RND transporter periplasmic adaptor
                     subunit"
                     /protein_id="HWX73638.1"
                     /translation="MAIVNAARLAAALLIAAALSALAGCGQGQQKQAGPPPPPAVTVA
                     NPEQRTVVDQDEYVGRFVAVDAVEVRARLSGYLSEIHFTDGQLVKKGDLLFTIDRRPF
                     SIALEQMRANLAQARANLAFTEADLARGQELVHNKTITEQSYDQRIQAKRVAEASVAA
                     QEAMVHSAELDFNEYSQLRAPIDGRIGDRRVSVGNLVSGSIASNTTLLATIVSVDPIR
                     FEFTFDEASYLRYQRFAGPATQMAKGESGVSVSLKLIDEQEFEHTGKMDFVDNAIDRS
                     SGTIRGRAVLDNPGARFTPGMFGHIRVPGSPPHSALLIPDAAIGTEQSRKFVLVVDDG
                     GVARQKYVTLGQLDGGLRVIKDGLAAGDKVIVKGLMRARSGQKVTVQDEPAPPPPRKG
                     PDEAKAG"
     gene            3881..4872
                     /locus_tag="VNY79_14170"
                     /pseudo
     CDS             3881..4872
                     /locus_tag="VNY79_14170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013949654.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
     gene            5609..5758
                     /locus_tag="VNY79_14175"
     CDS             5609..5758
                     /locus_tag="VNY79_14175"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73639.1"
                     /translation="MEDANVRQHAADEQMRAAQDERRRHDDRLRELLDVATKLINQTA
                     KKPES"
     gene            complement(5846..6913)
                     /locus_tag="VNY79_14180"
     CDS             complement(5846..6913)
                     /locus_tag="VNY79_14180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007599473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HWX73640.1"
                     /translation="MHSTPNLQPAASAQLIFPHVEAPAAGTTIEVAPGILWTRLALPF
                     LLDHVNIYFIEDGAGWTLIDTGLGDKATQAAWQPLFDGVLRGRPLTRIIATHFHPDHV
                     GAAGFLLKHFDVPLYMSATEYLQSLNIHLDPGALEAEHYRHFYLDHGLDADTTRRVVT
                     GGHSYLKRTSGLPPTYHRVVAGDMLRIGGREFDVLTGGGHSPEEIMLLSRADKLFLSA
                     DQVLAKISPNVSVIAVDPEGDPLGHYLRSLGALRRDVGEDVLVLPGHNLPFYGLHTRI
                     DQLIAHHEARCDLILHACRTAPRSAAELVPFVFTRKLDPHQMGFAFSEVLAHVNYMLR
                     LGMLTEVAGADGIRRVTAAVQ"
     gene            complement(6974..7522)
                     /locus_tag="VNY79_14185"
     CDS             complement(6974..7522)
                     /locus_tag="VNY79_14185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011664677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73641.1"
                     /translation="MGILLGLAPFIAFFALMRLVSPLAGLAAGLVVSLLLGARMWWRG
                     ETIKILEIGSLLLFAGLTLYTLVAAPAWSVASVRLVVDAGLLAIVLVSLAIGRPFTLP
                     YARERVPKEFWAAPRFLHANRVITSVWAAAFAVLVAADAAAEYLPAVPLTVDVVASIL
                     AFAGAVAFTSWYPAKLRRAAGL"
     gene            complement(7646..8341)
                     /locus_tag="VNY79_14190"
     CDS             complement(7646..8341)
                     /locus_tag="VNY79_14190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011474577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HWX73642.1"
                     /translation="MLEVRDLHAYYGKSHILQGVSLNVGAGEIVSILGRNGVGRSTTL
                     KAIMGDVPPHGSIVFKDEPIAGLKPYEIAHRGIGYVPEDRAIFPTLTVEQNLILGRKA
                     GKKATRWGFGDAYRLFPRLEEMAATPAGVISGGEQQMLTICRTLMGDPDLIMVDEPTE
                     GLAPQMVERIAGLLQNIAARHISILLVEQKLTIAMRISHRVYVMGHGRVVFEGTPAEL
                     AADATVRHAWLEV"
BASE COUNT         1541 a         2670 c         2889 g         1273 t
ORIGIN      
        1 gaacgtgcgc ccgaacaggt tgaagtcgtt gacataggcg gagccgagga aaacctgcag
       61 ggcgttgaac acatcctgca cgttgatgcc gaggagctgc gccttggtgc ggtcgatgtc
      121 gagatagacc tgcggcgtcg aggtttcgaa cagcgtgaat acctgcgcga cgccgggcgt
      181 ctgcgaggca cgtaccatca tcgcgaccgc cgcctgctgc aacgccgccg agccgcgtcc
      241 ggcgcgatcc tcgatcatca tgcggaagcc gccggcggtg ccgatgcccc tgaccggcgg
      301 cggcagcgcc gcaatgacga aggcgtcctg gactttcgac atccggcggt tgagctccgc
      361 ctggatggcc cgcgccgact gctccggatg gcgggcgcgc ttctcgaacg ggtcgagcac
      421 caggaagatc gcgccggaat tgggcgcgtt ggtgaaggtt gccccggaga agccgacgat
      481 gttggcgccg tgggcgatgc cgggaacttc gagcgcgata tcgagcgcgc gctgctgcac
      541 cgcatcggtg cgcgccagcg atgcgcccgg gggaagctgc accacgagga tgacgtagcc
      601 gccgtcgacc tgcgggatga agccgaccgg cgtctggcgg aattgattga ggccgaagcc
      661 gaggaagacg aggtagatca cgaacatgat cgcggcgcgg cgcacggtgc gcgtggccag
      721 ccaggaaatt ccgacagcga cgccgccgaa accccaattg aaggcgcgga agaaggcatg
      781 gatcggccgc tcccaccagc ggtcgcggtg cgtgggatcg tgcggcttga gcagcagcgc
      841 gcacatcgcc ggcgacagtg tcagcgagac aatgagcgag atgacggtgg cgccggcgat
      901 cgccagcgcg aactgccggt agaactggcc ggatatgccg gtgatgaata ccgaaggcac
      961 gaacaccgcg cagagcacga gcgcgatggc gatgagcgcc gagccgacct cgttcatgct
     1021 cttgattgcc gcttcgcgcg gcgccagccc ctcggagata ttgcgttcga cgttctcgac
     1081 gacgacgatg gcatcatcga cgacgatgcc gatcgccagc accagcccga acaatgagag
     1141 gttgttaagc gtgaagccga atgccgacat gaagaagaac gtgccgatga gcgacaccgg
     1201 tatggcgacg agcggaatga tcgccgcgcg ccaggtctgc aggaaaacga tcaccaccag
     1261 gaccacgaga acgatcgcct cgccgatcgt ctcgaccacg gcattgaccg actcctggat
     1321 gaactgcgtc ggattgtaga cgatggcgta tttgatgccg ggcgggaacc gcttcgccag
     1381 ctccaccatc agccgcgaca cgccctgggc ggtctccagc gcgttggagc cggggcgctg
     1441 gaaaatggcg agcgcgaccg ccggatcgtg atcgagatag gaattcgacg aatagtcgag
     1501 cgcggcgagt tcgaccctgg cgacatcctt caagcggacc accgcgcccg gcgtctgctt
     1561 caccacgatc gtgccgaact cgtcagggtc ggcgagccga ccgagagtct gcaccgcgat
     1621 ctggaacgcg ccggggtgcg cgaccggcgg ctggtcgagc acgccggaag cgacctggat
     1681 gttctgcccc tgcagcgcgc tggtgacgtc ggtggcggtc agcccgagcg attgcagccg
     1741 gtcgggatcg agccagatgc gcatcgagta gtcgcggctg ccgaacacgc tgatcgagcc
     1801 gacgccgtcg acgcgggtga gggcgtcggt caattcgagc gtggcgtaat tggaaatgaa
     1861 cagcgagtcg cgcgatttgt ccggcgaaaa gaggtgcacg accatcatca ggtcgggcga
     1921 ggccttggtg acggtgacgc cgatgttgcg cacgtcggct ggcagccgcg gctgcgcgat
     1981 cgagacgcgg ttctgcacct ggacctgcgc gatgtcgaga ttggtgccga ggtcgaagct
     2041 gacctggatg gagaagcgcc cgtcggcggt cgagttcgag tacatgtaca gcatgttctc
     2101 gacgccgttg atctgctgct cgagcggcgt cacgacggtc gaggccacga cctcggcgct
     2161 ggcgccggga tactggccgg agacgttgat gaccggcggc gcgatctcgg ggtattgcgc
     2221 gaccggcaga cgcgcgaaag cgacgccgcc gaggatgacg aagatgatcg agaccacggc
     2281 ggcgaagatc ggccggtcga tgaagaaatg cgaaatgcgc atctatgaca tttccggtcg
     2341 cgggttggcg cccggcctca gccggccttt gcctcgtcgg ggcccttgcg tggcggcgga
     2401 ggcgccggct cgtcctgcac cgtgaccttc tgccccgagc gcgcgcgcat gaggcctttg
     2461 acgatcacct tgtcgccggc ggcaaggccg tccttgatca cgcgcagccc gccgtcaagc
     2521 tggccgagcg tgacgtattt ctgccgggcg accccgccgt catcgaccac gagcacgaac
     2581 ttgcgcgatt gctcggtacc gatcgcggca tcgggaatga gcagcgccga atgcggcggc
     2641 gagccgggaa cgcggatgtg tccgaacatt ccgggcgtga acctggcgcc gggattgtcc
     2701 aataccgcgc ggccgcggat cgtgcccgag gagcgatcga tggcattgtc gacgaaatcc
     2761 atcttcccgg tgtgttcgaa ctcctgctcg tcgatgagct tgagcgagac cgaaacgccg
     2821 ctttcgccct tggccatctg cgtggccggc ccggcaaagc gctggtaacg caggtacgag
     2881 gcttcgtcga aggtgaattc gaagcggatc ggatcgaccg acacgatggt cgccagcaac
     2941 gtggtattgc tggcgatgct gccggaaacg agattgccga cggacacgcg gcgatcgccg
     3001 atgcggccgt cgatcggcgc ccgcagctgc gaatattcgt taaagtccag ctcggccgag
     3061 tgcaccatcg cctcctgcgc cgcgaccgag gcctccgcca cccgcttggc ctgtatgcgc
     3121 tggtcgtagc tctgctcggt gatggtcttg ttgtgcacga gctcctgccc gcgcgcgaga
     3181 tcggcctcgg tgaaagcgag attggcgcgc gcctgagcga gattggcgcg catctgttcg
     3241 agcgcgatgg agaatggccg ccggtcgatg gtgaagagaa ggtcgccctt cttgaccagc
     3301 tgcccgtcgg tgaagtggat ttcggaaaga taccccgaga ggcgcgcccg cacctcgacc
     3361 gcatccaccg cgacgaagcg gccgacatat tcgtcctggt cgacgaccgt gcgctgctcc
     3421 gggttcgcta cagttacggc cggcggaggc ggtggtcccg cctgcttctg ctggccctga
     3481 ccgcacccgg ccagagccga aagcgcggca gcgatcagca gggcggcggc caggcgcgcc
     3541 gcattaacga tggccatgag gtctccttac ggacttccct gcgtccgcac cataagtgct
     3601 cgctgctgtc aaccagccgc gtggcgggac tgcggcgcgg ggagtcgcag ccgggtaaga
     3661 tatgggagag caggtagaat ccgccacgtc aacgtccccg atggcgatgc cgccgacccc
     3721 acgcgcatcg ctcctttccg cggatcgctc gggcccccat atcctactcc cggctggtac
     3781 cgccgggctc ccgggctaat gccgcgaatc catggcgatt tccgtgaaga tcatccctct
     3841 gaatgcgatc ggctggggcg ggctccgacc cgccgacgat gtgccctcag agcgggctgc
     3901 ggtcccgccc gagcaccaag cgctgctcga cgcctattcc cgcgccgtca tcgacgtggt
     3961 cgaccgggtc gggccggcgg tggtcggtct agccgcacgc ggcaacggag acggctccgc
     4021 gcgatcacgg ggcgggtcgg gctcaggagt cgttgtcgct cccgacgggc tcattcttac
     4081 caacagccac gtcgcggacg cggccggctc cggttcgcgc atcgaggtga ccaccgccga
     4141 cggccaggat ttgcgcgcgc ggctggtggg cgatgatccc gacaccgacc tcgcgctgct
     4201 gcgcatcgac gaagcggtga cgctgacggc ggcgccgctc ggcgattcaa agaagttgaa
     4261 gcgcggccag ctggtgatcg ccatcggcaa tccgctcggt ttcgaatcga cagtgacgac
     4321 cggcgtcgtg tccgcgctcg gccgttcgct gcgctcgcgc accggccgcc tcatcgacga
     4381 tctgatccag accgacgccg cgctcaatcc cggcaattcc ggcggaccgc tcgtttcgtc
     4441 ccacggcgag gtcgtcgcat caacaccgcg gtgatcatgg gcgcccaggg catctgcttt
     4501 gccgtcgccg ccaacaccgc aagcttcgtg ctcggcgagc tggtgcgcca cggccgcgtg
     4561 cgccgcgcgt tcatcggcat tgccgctcag cagaccgcca tcccgcggcg gctgcgtcac
     4621 gccgcttccc tccggcagga gagcgcggtg atggcggcga ccgtcgagcc ggcaagcgcc
     4681 gccgatcgcg ccggtctcag ggccggcgac ctcctcctcg ccctcgacgg ggtgacgatc
     4741 accggcgccg acgatctcat tcgcgcgctg accggcgaca agatcggcaa gagtgtcgcg
     4801 ctcgatgtgt tgcgcggcac cgagcggctc gcgctctcgc tggtgccgca agagcgtaag
     4861 cgggccggct gatcggccct cccctccccg ccgtcgccac cgattttgcc tattttgcgg
     4921 gctgcaaaga ccgtcatttt ttcgctaggg tgcgcacggg acgacgggag tcctcggctg
     4981 gagcttgctc ccggagtgga gggaatcatg cgtggcgtat tggtagcgtt ggtggtgggc
     5041 gccgtgtttg cgttgagctt cagtccggcg gacgcgaaat gcggcagaag ggccaggggt
     5101 gaatgcggcc acagggtgca cgtccacgtg gtgcgcgtgg tgcgcgaggt gcaagccccc
     5161 gatgcgaccg ggacggacat gcgggccatg gcctcctcgc agatcgaaat ggccaagaag
     5221 caactggaca tggccgacgc ggcggtcaac cgggcgaagc aagagcagga catggcgagc
     5281 gaggcgatca cccgctccaa acaggagcag aagaacgcgg cgcaggcaat ggagcgctcg
     5341 aaacgcgaga tcgaacagat gaaggcgcgg ggccgagcgg gaaatcgccg atgccaaggc
     5401 gcgggccgac caggagatcg ccgaggccag gcttcaggcc gaacgcaaga tcgccgcgca
     5461 gatcaccgag gcgagcaggc tgcggcagac cgcgatcgag ctgcaggact atctgaccca
     5521 gaagatcggc gaagagaaaa agatcctgga agaggcctcg gcgcgcgagc gcgaggcgga
     5581 tcagaagatc aaggacgccg acgcgaatat ggaggacgcc aatgtccgcc agcatgcggc
     5641 cgacgagcag atgcgcgccg cgcaggacga acgccggcgg cacgacgatc gcctgcgcga
     5701 actcttggac gtcgcgacca agctgataaa ccagaccgcc aagaagccgg aatcgtgagc
     5761 gcgcccgcga tcggtggcgc aaccatcatg cgggccctcg cgaatttcgc cgcaggcccg
     5821 gaggcggcaa tcggaactgc gcctgctact gaaccgccgc cgtgacccgg cggatgccgt
     5881 ccgcgccggc gacttcggtg agcatgccca ggcgcagcat gtagttcacg tgcgccagaa
     5941 cctcactgaa cgcgaagccc atctgatgcg ggtcgagctt gcgcgtgaat acgaacggca
     6001 ccagctccgc ggcggagcgc ggtgccgtcc ggcacgcgtg caatatcaga tcgcaacgcg
     6061 cctcatggtg ggcgatcagc tggtcgatgc gggtgtgcag cccgtagaac ggcagattgt
     6121 gtcccggcag caccagcacg tcctcgccga cgtcccggcg cagcgccccg agcgaacgca
     6181 gatagtgccc gagcgggtcg ccttccggat cgaccgcaat cacgctgacg ttgggcgaaa
     6241 tcttcgccag cacctgatcg gccgagagaa acagcttgtc ggcccgggag agcagcatga
     6301 tctcttccgg cgaatggccg ccgccggtga gcacgtcgaa ctcgcgcccg ccgatgcgca
     6361 gcatgtcgcc ggcaacgacg cggtgatacg tgggcggcag ccctgaagtc ctcttgagat
     6421 aggagtgacc gccagtgacc acgcgccggg tcgtatccgc gtcgaggccg tggtcgagat
     6481 agaagtggcg gtagtgctcg gcctcgagcg cgccggggtc gagatggatg ttcaggcttt
     6541 gcagatattc cgtcgccgac atgtaaagcg gcacgtcgaa atgcttcagc aggaagccgg
     6601 cggcgccgac atggtcggga tggaaatgcg tggcgatgat ccgcgtcaac ggtcgtccgc
     6661 gcaacacccc gtcaaacagc ggctgccacg ccgcctgggt cgccttgtca ccgagcccgg
     6721 tgtcgatgag cgtccagccg gcgccgtctt cgatgaagta gatgttcacg tggtcgagga
     6781 ggaacggcag agcgagccgc gtccacagga taccgggtgc gacctcgatc gtggtgccgg
     6841 ccgcgggagc ttcaacgtgc ggaaaaatga gctgtgcgct ggcggcgggc tgaaggttgg
     6901 gtgtgctgtg catcgtgcgg ggtgatggcc cacgcgccgc gaagagtcaa atggagggaa
     6961 cgcgcaaggc gcgtcagaga ccggctgcac gccgcagctt cgccggatac cacgatgtga
     7021 atgcgaccgc gccagcgaac gccaggatcg aagccacgac atcaaccgtc agggggaccg
     7081 cgggcagata ttccgccgct gcatcagcag cgacgagcac cgcgaaagca gcggcccaaa
     7141 ccgaggtgat cacgcggttg gcgtgcagga aacgcggcgc cgcccagaat tctttcggca
     7201 cccgctcgcg ggcgtacggc agtgtaaacg ggcggccgat cgccagtgaa acgagcacga
     7261 tcgccaggag gccggcatcg acgaccaggc ggacgctggc cacactccac gccggcgcgg
     7321 caaccagcgt gtaaagcgtc aaaccggcaa acaggagcaa gctgccgatc tcgaggatct
     7381 tgattgtttc gccgcgccac cacatgcgcg cgccgagcag aagggaaaca acaaggcccg
     7441 ccgccagccc cgcgagcggc gagaccagcc gcatcaaagc gaaaaacgca atgaaaggcg
     7501 ccaaacccag caggatgccc atctccacct cttggccgac ggaccggccg gcgatcgttg
     7561 ttgcgccccg gcaaccgact atctgcaaaa gaatgcgcga tcaatgatcg ttcggtgcgc
     7621 acggcggaac gcggaggcgt ccgcctcaaa cttccagcca ggcatggcga accgtggcgt
     7681 cggcggcaag ctcggcgggc gtgccctcga acacgacgcg gccgtggccc atcacataga
     7741 cgcgatggga gatgcgcatg gcgatggtca acttctgctc caccagcagg atggagatgt
     7801 ggcgcgcggc gatattctgc agcaggccgg cgatgcgctc gaccatttgc ggcgccagcc
     7861 cttcggtcgg ctcgtcgacc atgatgaggt ccggatcgcc catcagcgtg cgacagatcg
     7921 tgagcatctg ctgctcgccg ccggagatca cgccggcggg cgtcgccgcc atttcctcga
     7981 gcctgggaaa caaccggtag gcatcgccga agccccagcg tgtcgccttc ttgccggcct
     8041 tgcggccgag gatcaagttc tgctcgaccg tgagcgtggg aaagatggcg cggtcctccg
     8101 gcacgtagcc gatgccccga tgcgcgatct cgtaaggctt gaggccggcg atgggttcgt
     8161 ccttgaaaac gatcgagccg tgcggcggca cgtcgcccat gatcgccttc aaggtggtcg
     8221 agcggccgac gccgttgcgg ccgagaatgc tgacgatctc gccggcgccg acattgagcg
     8281 acacgccctg caggatgtgg ctcttgccgt agtaggcatg caggtcgcgg acctcgagga
     8341 tcatgcggcg gtgcccagat aagccgtctg cac
//
LOCUS       DATMQB010000490         6050 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_4320528, whole genome shotgun sequence.
ACCESSION   DATMQB010000490 DATMQB010000000
VERSION     DATMQB010000490.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 6050)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6050)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6050
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_4320528"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            complement(<1..1500)
                     /gene="ubiB"
                     /locus_tag="VNY79_14195"
     CDS             complement(<1..1500)
                     /gene="ubiB"
                     /locus_tag="VNY79_14195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019199089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0016709 - oxidoreductase activity, acting
                     on paired donors, with incorporation or reduction of
                     molecular oxygen, NAD(P)H as one donor, and incorporation
                     of one atom of oxygen [Evidence IEA];
                     GO_process: GO:0006744 - ubiquinone biosynthetic process
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="2-polyprenylphenol 6-hydroxylase"
                     /protein_id="HWX73643.1"
                     /translation="MISGPAHLIRLGRAGFVFAREGVFGAIDPVMVPPAARPLLRVAR
                     LFERPSSGAVEARLSAALTRLGPSYVKLGQFLATRPDVVGAVLARDLERLQDQMPPFP
                     QDEAEAVVAASFGRPVGAMFAHFGAPVAAASIAQVHRAEVATASGSRAVAVKVLRPGI
                     ERRFHADLRAFTFVARHAEDLSAEARRLRLVEVVDTLRRSVMVEMDFRLEAAALSEMA
                     ENTKDDPDFRVPAVDWDRTTKEVLTLEWVDATPLSDRARVQAKGFDLSQLARALIQTF
                     LRHALRDGFFHADMHPGNLFVDDAGRLIAVDFGIMGRLGAKERLFLAEILHGFITRDY
                     HRAAEVHFEAGYVPPSHSVESFAQAIRAIGEPIHNRTAEDISMARLLTLLFEVTGLFD
                     MRTRPELLLLQKTMVVVEGVARSLDPKLDMWSTAEPVVREWMTRHLGPAGKLEAAAEG
                     AADVRRFIGNAPGLLTRGARVLDQLDEITRDGLVLSPQTIAEIDKAEARR"
     gene            complement(1497..2252)
                     /gene="ubiE"
                     /locus_tag="VNY79_14200"
     CDS             complement(1497..2252)
                     /gene="ubiE"
                     /locus_tag="VNY79_14200"
                     /EC_number="2.1.1.163"
                     /EC_number="2.1.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009025931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008168 - methyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional demethylmenaquinone
                     methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol
                     methylase UbiE"
                     /protein_id="HWX73644.1"
                     /translation="MAVADSAHFGSRKVPLAHKQALVDDVFHSVAHRYDQMNDLMSFG
                     LHRAWKDVLVGAVNPPKGRPFALLDIAGGTGDVALRALAAGGERTRATVCDINADMLA
                     VGRERAAARGLGPAVAFTEANAEALPFADRSFDAATIAFGIRNVPRIERALAEAFRVL
                     KTGGHFLCLEFSAVDVPGFAGLYDFYSFNIIPALGRAVVGDADAYRYLVESIRRFPSP
                     QAFAALLREAGFARVSHQVMTGGIVALHSGWRL"
     gene            2345..3232
                     /gene="mutM"
                     /locus_tag="VNY79_14205"
     CDS             2345..3232
                     /gene="mutM"
                     /locus_tag="VNY79_14205"
                     /EC_number="3.2.2.23"
                     /EC_number="4.2.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012561668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0003676 - nucleic acid binding [Evidence
                     IEA];
                     GO_function: GO:0003684 - damaged DNA binding [Evidence
                     IEA];
                     GO_function: GO:0003906 - DNA-(apurinic or apyrimidinic
                     site) endonuclease activity [Evidence IEA];
                     GO_function: GO:0008270 - zinc ion binding [Evidence IEA];
                     GO_function: GO:0008534 - oxidized purine nucleobase
                     lesion DNA N-glycosylase activity [Evidence IEA];
                     GO_function: GO:0016799 - hydrolase activity, hydrolyzing
                     N-glycosyl compounds [Evidence IEA];
                     GO_function: GO:0019104 - DNA N-glycosylase activity
                     [Evidence IEA];
                     GO_process: GO:0006281 - DNA repair [Evidence IEA];
                     GO_process: GO:0006284 - base-excision repair [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional DNA-formamidopyrimidine
                     glycosylase/DNA-(apurinic or apyrimidinic site) lyase"
                     /protein_id="HWX73645.1"
                     /translation="MPELPEVETVRRGLEPAMEGARFAKVEVHRGDLRWPLAKDFARR
                     LEGKTVTGLGRRAKYLLADLSSGDVLIMHLGMSGSFHVFQESARRGKTPGNYYHERTQ
                     HTAHDHIVFHMSSGAVVTFNDPRRFGSMKIVPRPQLDAEPLLSRLGPEPLGNAFDAAA
                     LALACKGKKTTLKAALSDQRVVAGLGNIYVCEALYRARLSPKRLAATIATKSGAPNER
                     AERLVEGIKAVLNEAIRDGGSSLRDHRLTDGELGMFQHHFRVYDREGDKCPTRGCRGT
                     VKRIVQNGRSTFYCPVCQK"
     gene            3258..4031
                     /locus_tag="VNY79_14210"
     CDS             3258..4031
                     /locus_tag="VNY79_14210"
                     /EC_number="4.2.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019964247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-CoA hydratase"
                     /protein_id="HWX73646.1"
                     /translation="MSYENIIVETRGRVGLIRLNRPQALNALNSALIADVSRAVDAFE
                     ADGNIGCMVITGSEKAFAAGADIKQMADKSFIEAYMGDFAAHWDRVANARKPTIAAVA
                     GFALGGGCELAMQCDIIIAADNAKFGQPEIKLGVIPGIGGTQRFTHAVGKAKAMDIML
                     TGRMMDAEEAERAGLVARIVPAASLVEEAMKVAETIASMSLPSVLAAKEAVNRAFETS
                     LAEGIRFERRIFHSLFATADQKEGMAAFIAKRPPKFENR"
     gene            complement(4086..5276)
                     /locus_tag="VNY79_14215"
     CDS             complement(4086..5276)
                     /locus_tag="VNY79_14215"
                     /inference="COORDINATES: protein motif:HMM:NF013625.4"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan-binding protein"
                     /protein_id="HWX73647.1"
                     /translation="MPESERLAIQSDLALLGDYEGAPGNFDEGTTAAVKAFQQHLHNR
                     ATGVLAAPERDALAAAAKGPAAAVGWRLIDDPKTGARLGLPEKLVPNSSASRSGSRWT
                     SAQGQIQIETFRYTEAALPALFEDEKKTSKRRVTASVLRAGSFVISGVQRLKNFIVRA
                     QASGSEVRGVTILYDQATEGIMATVATATAGAFQGFPDAKAAPLPGMRRAVEYATAIM
                     VSAGGDLLAPGRATEECRAIVVPGLGHAERVAADPANDLALLRLYGARNLAPAALAGE
                     SKGDALTLFGVGDPLAQAGDTAVMNVAARRTGQGVEPVPKLGFSGAAAVDAQGRFAGM
                     VDLTSPVAAGGRSVLPQATIVPADTVRSFLAAQGIILETGAAPAADHAAIEKSVMRVI
                     CVRK"
     gene            5910..>6050
                     /locus_tag="VNY79_14220"
     CDS             5910..>6050
                     /locus_tag="VNY79_14220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007598366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008641 - ubiquitin-like modifier
                     activating enzyme activity [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HWX73648.1"
                     /translation="MLTPDELERYARHIVLQEVGGPGQAALGRARVLVIGAGGLGAPV
                     LLY"
BASE COUNT         1014 a         2043 c         2031 g          962 t
ORIGIN      
        1 gcgccgcgcc tcggccttgt cgatctcggc gatggtttgc ggcgacagca cgaggccgtc
       61 gcgggtgatc tcgtcgagct gatcgagcac gcgggcgccg cgggtcagca ggccgggcgc
      121 gttgccgatg aaacggcgca catcggcggc gccttccgcc gcggcttcga gcttgccggc
      181 cgggccgaga tgccgcgtca tccattcgcg caccaccggc tcggcggtcg accacatgtc
      241 gagcttggga tcgagcgaac gcgccacgcc ctcgaccaca accatcgtct tctgcagcag
      301 cagcagttcc ggccgcgtgc gcatgtcgaa gagaccggtc acctcgaaca gcagcgtcag
      361 cagtcgcgcc atcgaaatgt cttccgcggt gcggttatgg atcggctcgc cgatcgcgcg
      421 gatcgcctgg gcgaaactct cgaccgaatg ggacggcggc acgtagccgg cttcaaaatg
      481 aacttcggcg gcccggtgat agtcgcgggt gatgaagccg tgcaggatct cggcgaggaa
      541 caggcgctcc ttggcgccga gccggcccat gatgccgaaa tcgacggcga tcagccggcc
      601 ggcatcgtcg acgaacagat tccccggatg catgtcggcg tgaaagaagc cgtcgcgcag
      661 cgcgtggcgg agaaaggtct ggatcagggc gcgggcgagt tgcgacaggt cgaagccctt
      721 ggcctgcacg cgcgcgcggt cggacagcgg cgtggcgtcg acccattcga gcgtgagcac
      781 ctccttggtc gtgcggtccc aatcgaccgc ggggacgcgg aaatccggat cgtctttggt
      841 gttctcggcc atctccgaca gcgccgccgc ttccaggcgg aaatccatct cgaccatgac
      901 cgagcgccgt agcgtgtcga cgacctcgac gagccgcagc cgccgcgcct cggcggagag
      961 gtcctcggcg tggcgcgcga cgaaggtgaa ggcgcgcagg tcggcgtgga agcggcgctc
     1021 gatgcccggc cgcagcacct tgaccgcgac cgcgcgcgat ccgctcgccg tcgcgacctc
     1081 cgcgcgatgc acctgggcga tcgaggccgc cgcgaccggc gcaccaaaat gcgcgaacat
     1141 cgcgccgacc ggcctgccga acgaggccgc gaccaccgct tccgcctcgt cctgcggaaa
     1201 cggcggcatc tggtcctgca gccgttcgag atcgcgggcg agcactgcac cgacaacatc
     1261 cggacgcgtc gccaggaact gcccgagctt gacgtagctc ggcccgagcc gcgtgagcgc
     1321 cgccgacagc cgcgcttcca cagccccgct ggacgggcgc tcgaacagcc gcgcgacacg
     1381 cagcagcggc cgcgccgccg gcggcaccat cacaggatcg atggcgccga acacgccctc
     1441 gcgggcgaac acgaagccgg ctcggccgag acggatgaga tgcgcgggac cggagatcac
     1501 aaacgccagc cggaatgcaa cgccacgatc ccgccggtca tcacctgatg cgagacgcgg
     1561 gcaaagccgg cctcccgcag cagcgctgcg aacgcctgcg ggctgggaaa gcggcgtatc
     1621 gattccacga gatagcgata ggcgtcggcg tcgccgacga ctgcgcggcc gagcgcgggg
     1681 atgatgttga acgagtagaa atcgtacagc ccggcaaacc caggaacatc cacggcggaa
     1741 aattcgaggc acaaaaaatg cccaccggtc ttgagcacgc gaaacgcctc ggccagcgcg
     1801 cgttcgatgc gcggcacgtt gcggatgccg aaggcgatgg tggcggcatc gaagctgcgg
     1861 tcggcaaacg gcagcgcctc ggcgttcgcc tcggtgaaag cgacggccgg accaagtccg
     1921 cgcgccgcgg cgcgctcgcg gccgaccgcg agcatgtcgg cattgatgtc acagaccgtt
     1981 gcgcgcgtgc gctcgccccc ggccgcgagc gcgcgcagcg cgacgtcgcc ggtcccgccg
     2041 gcgatgtcga ggagcgcgaa cggccggcct ttcggcggat tgaccgcccc cacgagcaca
     2101 tctttccagg cgcgatgcag gccgaacgac atcaggtcgt tcatctggtc atagcggtgc
     2161 gccacgctgt ggaatacgtc gtcgaccagc gcctgcttat gtgcgagcgg cactttccgc
     2221 gagccgaaat gggcgctatc tgccacggcc agaccggtcc tttgacgcaa ccatagcgcg
     2281 gcgccggaag cgacgctatg tgtcgaagct taaccatgtt ttcggcgacg ccgaggcccg
     2341 ccacatgcca gaactccctg aagtcgagac agtgcggcgc ggccttgagc cggcgatgga
     2401 aggggcgcgg ttcgccaaag tggaagttca ccgcggcgat ctgcgctggc cgttggcgaa
     2461 ggattttgcc cgtcggctcg aaggcaagac cgtgaccggc ctcggccgtc gggcgaaata
     2521 tctcctcgcc gacctctcgt ccggtgacgt gctgatcatg catctcggca tgtcggggtc
     2581 attccatgtc tttcaggaaa gcgcccgccg cggcaagacg cccggcaact actatcacga
     2641 gcgcacgcag cacacggcgc acgaccacat cgtgtttcat atgtcctcgg gcgcggtcgt
     2701 gaccttcaac gatccgcgcc gctttggctc gatgaagatc gtcccgcgcc cacagctcga
     2761 tgccgaaccg ctgctcagca ggctcggccc cgagccgctc ggcaacgcct tcgatgccgc
     2821 ggcgctcgcg ctcgcctgca aggggaagaa gacgaccctc aaggcggcgc tgtccgatca
     2881 gcgcgtcgtc gccggtctcg gcaacatcta tgtctgcgag gcgctgtacc gcgcgcggct
     2941 ctcgcccaaa cgcctcgcgg caacgatcgc caccaaatcc ggcgccccga acgagcgcgc
     3001 cgagcgcctg gtcgagggta tcaaggcggt gctcaacgag gcgatcaggg acggcggctc
     3061 ctcgctgcgc gatcaccggc tcactgacgg cgagctcggg atgttccagc atcactttcg
     3121 cgtctacgac cgcgagggcg acaaatgccc gacgcgcggc tgccgcggca cggtcaagcg
     3181 catcgtgcag aacggacgct cgacgttcta ttgtccggtg tgccagaaat gatttggtga
     3241 cctaccgaga gatggccatg agctacgaaa acatcatcgt cgaaacgcgc ggcagagtgg
     3301 gattgatccg gctcaatcgg ccgcaggcgc tcaatgcgct caacagcgcg ctgatcgccg
     3361 atgtgagccg cgccgtcgac gcattcgagg ccgacggcaa tatcggctgc atggtgatta
     3421 ccggctcgga gaaggcgttt gccgccggcg ccgatatcaa gcagatggcc gataagtcgt
     3481 tcatcgaagc ctatatgggc gacttcgccg cgcactggga ccgcgtcgcc aacgcccgca
     3541 agccgaccat cgccgcagtc gccggttttg cgctcggcgg cggctgcgag cttgccatgc
     3601 agtgcgacat catcatcgcc gccgacaacg ccaagttcgg gcaaccggag atcaagctcg
     3661 gcgtcattcc cggcatcggc ggcacgcagc gcttcaccca cgcggtcggc aaggcgaagg
     3721 cgatggacat catgctgacc ggccgcatga tggacgccga ggaggcggag cgcgcgggcc
     3781 tcgtcgcgcg catcgtgccg gcggcgagcc ttgtcgagga agcgatgaaa gtcgccgaga
     3841 cgatcgcgtc gatgtcgctg ccgtcggtgc tggcggcgaa ggaggcggtc aaccgcgcct
     3901 tcgagacctc gctcgccgaa ggcatacgct tcgagcgccg catctttcat tcgctgttcg
     3961 cgaccgccga ccagaaggaa ggcatggcgg ccttcatcgc caagcggccg ccgaagttcg
     4021 agaacaggtg acatcgtcat tcgggggcgc gccgaaggcg cgcgcccgga atgacaagtg
     4081 cactctcact tccgcacgca gatcacgcgc atcacggatt tctcgatcgc ggcatgatcg
     4141 gcggctggcg cggccccggt ttccaggatg atgccttgcg ccgcgaggaa gctgcgaacg
     4201 gtatcggcgg gaacgatcgt cgcctgcggc agcacggaac ggccgccagc cgccacaggc
     4261 gacgttagat ccaccatgcc ggcgaaacgg ccctgggcgt cgaccgccgc agcaccggaa
     4321 aaccccagct tcggcaccgg ctcgacgcct tggccggtgc ggcgggcggc aacgttcatc
     4381 accgccgtgt ccccggcctg ggccagcggg tcgccgacac cgaagagcgt cagggcatcg
     4441 cccttgctct cgccggcgag cgccgccggg gcgagattgc gggcgccgta gaggcgcagc
     4501 agcgcgagat cgttggccgg gtcggcggcg acgcgttcgg cgtggccaag gcccggcacg
     4561 acgatggcgc ggcattcctc ggtagcccga cccggcgcca gaagatcgcc gccggcactg
     4621 accatgatcg ccgtcgcgta ttcgaccgcg cgccgcattc ccggcagcgg cgcggccttg
     4681 gcgtcgggaa agccttgaaa cgcgccggcg gtcgcggtcg cgactgtcgc catgatgcct
     4741 tcggtcgctt gatcatagag gatggtgacg ccgcgcactt cgctgccgct tgcctgcgcg
     4801 cggacaatga aattcttcag ccgctggacg cctgaaatga cgaaggaacc cgccctgagc
     4861 acgctcgcgg tgacgcggcg cttcgaggtc ttcttttcat cctcgaacag tgccggcagc
     4921 gccgcttcgg tgtagcggaa cgtctcgatc tggatctggc cctgcgccga ggtccagcgg
     4981 ctgccgctgc gggaggcact ggaattcggc acgagttttt ccggcaagcc gaggcgcgcg
     5041 ccggtcttgg gatcatcgat caaccgccac ccgacggctg ccgccggccc tttcgcggcc
     5101 gcggcaagcg catcgcgctc cggtgcggca agcacgccgg tcgccctgtt gtggaggtgc
     5161 tgctgaaacg ctttgaccgc ggcagtcgtg ccctcgtcga aattgccggg ggcgccttcg
     5221 tagtcgccga gcaaggcaag atcggattgg atggcgagcc gttcggattc cggcatcgcc
     5281 gcatacgcgc ccgcggccga agaagctttt tgcccgtcgg ctttttgccc gtcagctttt
     5341 ggcgcgttag cttttggcgc gtctgatttt gacgcgtcta ttttttgcac gtcagctttt
     5401 ggcgcgtctg cttttgacgg gtctgctttt gacgggtcta ttttttgcac gtcagccttc
     5461 ggcgcgtctg cttttggcgc gtctgctttt tgcacgtctg cttttgacgc gtcagccttc
     5521 ggcgcgtctt ctgtgccttt cgcagctttc acacgggctc tgttcctggg cgggcgcaca
     5581 gcgcctgtcg gcgctggcaa cggcgccaca gccatgggga aaaccggcat ggaaaatgtc
     5641 tgcggcgccg gtcttgccgg cacaggccgg tacacgagcc gcgggacggc cgtcaccgcc
     5701 accggccggc ggacctgtaa ctccttggcc gatgccggca ggcccgccgc cagcacgccg
     5761 agaaggacaa tcgcgaccct ggcgcccatc cccgcaccta ctcgccgctg cgggacagct
     5821 tagcgcagtc gcggccacga tcaaaggatg tgttgttgaa cgccggcgca acggtggttc
     5881 cgggttccat tcgcgcctat cttgaggtca tgctcacgcc tgacgaactc gagcgctacg
     5941 cgcgccatat cgtactgcaa gaagtgggcg gccccggaca ggctgcgctt ggccgcgcgc
     6001 gcgtgctggt gatcggcgcc ggcgggcttg gcgctccggt gctcctttac
//
LOCUS       DATMQB010000491         3952 bp    DNA     linear   ENV 31-JAN-2024
DEFINITION  MAG TPA_asm: Xanthobacteraceae bacterium isolate SMAG_U12917
            k141_2474136, whole genome shotgun sequence.
ACCESSION   DATMQB010000491 DATMQB010000000
VERSION     DATMQB010000491.1
DBLINK      BioProject: PRJNA983538
            BioSample: SAMN37943524
            Sequence Read Archive: SRR7101595
KEYWORDS    WGS; ENV; Metagenome Assembled Genome; MAG; Third Party Data; TPA;
            TPA:assembly.
SOURCE      Xanthobacteraceae bacterium (soil metagenome)
  ORGANISM  Xanthobacteraceae bacterium
            Bacteria; Pseudomonadota; Alphaproteobacteria; Hyphomicrobiales;
            Xanthobacteraceae.
REFERENCE   1  (bases 1 to 3952)
  AUTHORS   Ma,B., Lu,C., Wang,Y., Yu,J., Zhao,K., Xue,R., Ren,H., Lv,X.,
            Pan,R., Zhang,J., Zhu,Y. and Xu,J.
  TITLE     A genomic catalogue of soil microbiomes boosts mining of
            biodiversity and genetic resources
  JOURNAL   Nat Commun 14 (1), 7318 (2023)
   PUBMED   37951952
  REMARK    Erratum:[Nat Commun. 2023 Dec 6;14(1):8079. PMID: 38057423]
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3952)
  AUTHORS   Caiyu,L.
  TITLE     Direct Submission
  JOURNAL   Submitted (26-OCT-2023) Soil Science, Zhejiang University, Jianshe
            Three Road 733, Hangzhou, Zhejiang 311200, China
COMMENT     The annotation was added by the NCBI Prokaryotic Genome Annotation
            Pipeline (PGAP). Information about PGAP can be found here:
            https://www.ncbi.nlm.nih.gov/genome/annotation_prok/
            
            ##Genome-Assembly-Data-START##
            Assembly Method        :: Megahit v. 1.2.9; Metawrap v. 1.2.1
            Genome Representation  :: Full
            Expected Final Version :: Yes
            Genome Coverage        :: Not Applicable
            Sequencing Technology  :: Illumina HiSeq
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Provider               :: NCBI
            Annotation Date                   :: 01/05/2024 19:02:11
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Software revision      :: 6.6
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA
            Genes (total)                     :: 2,849
            CDSs (total)                      :: 2,836
            Genes (coding)                    :: 2,797
            CDSs (with protein)               :: 2,797
            Genes (RNA)                       :: 13
            rRNAs                             :: 1 (16S)
            partial rRNAs                     :: 1 (16S)
            tRNAs                             :: 8
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 39
            CDSs (without protein)            :: 39
            Pseudo Genes (ambiguous residues) :: 0 of 39
            Pseudo Genes (frameshifted)       :: 21 of 39
            Pseudo Genes (incomplete)         :: 14 of 39
            Pseudo Genes (internal stop)      :: 7 of 39
            Pseudo Genes (multiple problems)  :: 3 of 39
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3952
                     /organism="Xanthobacteraceae bacterium"
                     /mol_type="genomic DNA"
                     /submitter_seqid="k141_2474136"
                     /isolate="SMAG_U12917"
                     /isolation_source="soil"
                     /db_xref="taxon:2021379"
                     /environmental_sample
                     /country="USA"
                     /lat_lon="42.481016 N 72.178343 W"
                     /metagenome_source="soil metagenome"
                     /note="metagenomic"
     gene            173..463
                     /locus_tag="VNY79_14225"
     CDS             173..463
                     /locus_tag="VNY79_14225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015663440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HWX73649.1"
                     /translation="MRALFLVIDLALEIYIWIVIAAAIFSWLVAFHVVNTRNQVVGMI
                     GEFLYRITEPVLRPIRNLLPNLGGIDVSPVVLFLIIIFIRYVIQLYILPNVY"
     gene            469..792
                     /locus_tag="VNY79_14230"
     CDS             469..792
                     /locus_tag="VNY79_14230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014438917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF167 family protein"
                     /protein_id="HWX73650.1"
                     /translation="MAGEPWTAAADGVVIDVRLTPRGGRDAIEGTERRADGRAVLKVR
                     VRAVPAAGEANAALCLTIAKALAIAPRQVTLAGGATSRLKRLRVAGEPAVLIAALRRL
                     VSDER"
     gene            complement(860..1369)
                     /locus_tag="VNY79_14235"
     CDS             complement(860..1369)
                     /locus_tag="VNY79_14235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006611902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0008080 - N-acetyltransferase activity
                     [Evidence IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HWX73651.1"
                     /translation="MSTVLIEIRRAKACDAGAVADAHDEAWRTAYQGIIPGTELDKLI
                     NRRGPVWWESAIRKGSRIALLQFSDKIAGYANYGRNRARSLYYDGEIYELYLRPEFQG
                     LGFGRRLFTAARRDLAQSGLKSLIVWALSENDTAVEFYRALGGKAVARSSEKFGTRVL
                     DKVAFGWNS"
     gene            complement(1623..3449)
                     /gene="typA"
                     /locus_tag="VNY79_14240"
     CDS             complement(1623..3449)
                     /gene="typA"
                     /locus_tag="VNY79_14240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_018388089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology.
                     GO_function: GO:0005525 - GTP binding [Evidence IEA];
                     GO_process: GO:0006412 - translation [Evidence IEA];
                     GO_process: GO:0006950 - response to stress [Evidence
                     IEA]"
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HWX73652.1"
                     /translation="MNLRNIAIIAHVDHGKTTLVDRLLQQSGAFRDNQRVAERALDSS
                     DLERERGITILSKVTSILWQDTRINIVDTPGHADFGGEVERILNMVDGALVLVDAAEG
                     PLPQTKFVVTKALKVGLKPIVVINKVDRPDARPTEVANEVFDLFAALDASEEQLDFPI
                     LYGSAKQGWMAAAPAGPKDKGMRPLFDLVVRHVAPPTVEEGPFRMIGTILEANPYLGR
                     IVTGRISSGSAKPNQPIKVLDRNGNLIEEGRATKVLAFRGLERTPIEEGFAGDIVSIA
                     GLPEATVSHTLCAPEVTEPLPAQPIDPPTLAMTFRINDSPLAGTEGDKVQSRVIRERL
                     LREAEGNVALRISESTEKDSMEVAGRGELQLGILIETMRREGFELSVSRPKVLFQNGP
                     SGELLEPIEEVLIDVDEQHAGIVVQKMAERKGELIEMRPSGGGRVRLIFYAPTRGLIG
                     YHGELLTDTRGTAVMNRLFHAYGTHRGEIAGRRNGVLISTDRGDAVAYAMWNLEDRGP
                     MMIEPGWKVYRGMIVGEHTRGNDLEVNVLKGKKLTNIRTHAKDEAIRLTPPIRMTLEK
                     ALAYIEDDELVEVTPKSIRLRKKLLDPNERKKDERRKEAERV"
     gene            complement(3592..>3952)
                     /locus_tag="VNY79_14245"
     CDS             complement(3592..>3952)
                     /locus_tag="VNY79_14245"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HWX73653.1"
                     /translation="IFYGLLIFPIFGSAIAGVAGYFHRSGRTRRLRLLQRLIELVRKA
                     HAAPSLEALDRLQLDADNLLVAIIHQSEHDDYDEAMQMSFSLALDQVRFAIAARRAAL
                     LNEGGGEAKATAKAAAA"
BASE COUNT          623 a         1256 c         1335 g          738 t
ORIGIN      
        1 cggcgcgatc aggcccgatc tgggggcccg gcttggcgag ttcgggccat ttacggccgc
       61 gacctaatac tgtcaaggat aactgccggt aagcgcggtc aggcctgatg ctcggcttgt
      121 tcgcgcgacc gcaaatcgct aggttccatc atcgtcaccg cgataccggt ccatgcgcgc
      181 cctttttctc gtcatcgatc ttgccctcga gatctacatc tggatcgtga tcgcagccgc
      241 gatcttctcc tggctggtgg cgttccacgt ggtgaatacg cgcaaccagg tcgtggggat
      301 gatcggcgag tttctctacc ggatcaccga gcccgtcttg cgcccgatcc gcaacctgct
      361 gccgaatctt ggcggcatcg acgtgtcgcc ggtcgtgctg ttcctgatca tcatcttcat
      421 tcgctatgtg atccagctct acatcctacc gaacgtctac tgaccaccgt ggctggcgag
      481 ccatggacgg cggcagccga tggcgtcgtc atcgacgtgc ggctgacgcc gcggggcggc
      541 cgcgatgcga tcgaagggac cgaacggcgc gccgacggcc gcgccgtgct caaggtgcgg
      601 gtgcgtgccg tgcccgctgc aggagaggcg aatgcggcgc tttgcctgac catcgccaag
      661 gcgcttgcga tcgcgcctcg ccaggtgact ctcgccggcg gggccacatc gcgattgaag
      721 cgccttcggg ttgccggcga gccggcggtg cttatcgcag cgctgcggcg cctggtgtca
      781 gacgagaggt gacaggcaac ggacgacgga tcggaatgct cacattccgt tttctgtcct
      841 tcgtgctcgg tcgtccgctt cagctattcc agccgaaggc gaccttgtcg agcacgcgcg
      901 ttccgaattt ttccgatgag cgggcgaccg ccttgccgcc caaggcgcgg tagaactcga
      961 ccgcggtgtc gttctccgac agcgcccaca cgatcagcga tttgagcccg ctctgcgcca
     1021 ggtcgcggcg cgcggcggta aacagccgcc gcccgaagcc gaggccctgg aattcggggc
     1081 ggaggtagag ctcgtagatc tcgccgtcat agtagaggct gcgcgcccga ttgcgcccgt
     1141 aattggcgta gccggcgatc ttgtcgctga actgcaggag cgcgatacgg ctgcctttgc
     1201 ggatggcgct ttcccaccac accgggccgc gccggttgat gagcttgtcg agttcggtgc
     1261 ccgggatgat gccctgatag gcggttcgcc acgcctcgtc gtgagcatcg gcgacggcgc
     1321 cggcatcaca cgccttggcg cgacgaattt cgatgaggac agtgctcatg gcgcaatcaa
     1381 agcaagcgat tccccgggct tcaagtgccg tgattcatca tcggttaacg gtgtggatta
     1441 ttagcggaat cccggccgca gcgccatcgt cgcgagcgga aaaattctag gtctgctcgc
     1501 aagctggagg ggctgttgca cgagcgacac ggtcgtccga atatttcgtg ccggcgcctg
     1561 ctgggccgtc gaaaatcgtg ggcggggcct ggtgggcggc acgcagggag cgccgcagcg
     1621 attcacacgc gctcggcttc cttgcgccgc tcgtccttct tgcgttcgtt cggatcgagg
     1681 agctttttgc gcaggcgaat cgatttcggc gtcacttcga ccagctcgtc atcctcgata
     1741 taggcgagcg ccttttccag cgtcatgcgg atcggcgggg tgagccggat cgcctcgtcc
     1801 ttggcgtgcg tgcggatatt ggtgagcttc ttgcccttga gcacgttgac ctcgaggtcg
     1861 ttgccgcggg tgtgctcgcc gacgatcatg ccgcggtaga ccttccagcc cggttcgatc
     1921 atcatcggcc cgcggtcctc gagattccac atggcgtagg ccacggcgtc gccccggtcg
     1981 gtcgagatga ggacgccgtt gcggcgtccg gcgatttctc cccggtgcgt gccgtaggca
     2041 tgaaacaggc ggttcatcac cgcggtgccg cgcgtgtcgg tcaacagctc gccgtgatag
     2101 ccgatgaggc cgcgcgtcgg cgcatagaag atgagccgca cgcggccgcc gccggaggga
     2161 cgcatctcga tgagctcgcc cttgcgctcg gccatcttct gcacgacgat gccggcgtgc
     2221 tgctcgtcga catcgatcaa cacttcctcg atcggctcga gcagctcgcc ggacggcccg
     2281 ttctgaaaca ggaccttcgg ccgcgacacg gaaagctcga agccttcgcg ccgcatggtt
     2341 tcgatgagga tgccgagctg caattcgccg cggccggcga cctccatcga atccttctcc
     2401 gtcgattcgg aaatccgcag cgcgacgttg ccctccgcct cacgcagcag ccgctcgcgg
     2461 atcacccggc tctgcacctt gtcgccctcg gtgccggcga gcggggaatc gttgatgcgg
     2521 aaggtcatcg ccaaggtcgg cggatcgatc ggctgcgccg ggagcggctc ggtcacttcg
     2581 ggcgcgcaca gcgtgtgcga gacggtcgcc tcgggcaggc cggcgatgga gacgatgtcg
     2641 ccggcgaaac cctcttcgat cggggtgcgc tcgaggccgc ggaaggcgag gaccttggtg
     2701 gcgcgcccct cctcgatcag gttgccattg cggtccagca ccttgatcgg ctggttgggt
     2761 ttcgccgagc ccgatgagat gcgtccggtg acgatgcgcc cgagatacgg attggcctcg
     2821 aggatggtcc cgatcatgcg gaacggccct tcctcgacgg taggcggcgc gacgtggcga
     2881 acgaccaggt cgaacagcgg cctcatgccc ttgtccttcg gtccggcggg ggcggccgcc
     2941 atccacccct gcttggccga gccatagagg atcgggaagt cgagctgttc ctcgctcgca
     3001 tcgagcgccg cgaacagatc gaaaacctcg ttggcgacct cggtgggccg ggcgtcgggc
     3061 cggtcgacct tgttgatgac gacgatgggc ttgaggccca ccttgagcgc cttggtgacc
     3121 acgaacttgg tctgcggcaa cggcccctcg gcggcgtcga ccagcaccag agcgccgtcc
     3181 accatgttga ggatgcgctc gacctcgccg ccgaaatcgg cgtggccggg cgtatcgacg
     3241 atattgatgc gggtgtcctg ccagaggatc gaggtgacct tcgacaggat ggtgatgcca
     3301 cgctcgcgct cgaggtcgct ggaatcgagc gcgcgctcgg cgacgcgctg gttgtcgcgg
     3361 aacgcgcccg attgctgcag cagccggtcg acgagcgtgg tcttgccatg gtcgacgtgg
     3421 gcgatgatgg cgatgttgcg gagattcata tgcggaattc gcgccgtaaa ccaaaacgag
     3481 ccccgaaggg cccgtgcgtt cggcccggaa tatagtgatc ggcgcgcggt tcgcaacgcg
     3541 gcaccgccgt cgcgcgtcgt ggagccgtcg atggcgcgaa gttccggccg gctaagccgc
     3601 ggcggccttc gcagtggcct tggcttcgcc gccgccctcg ttgagcaggg cggcgcgccg
     3661 cgccgcgatg gcgaagcgga cctggtcaag cgcaagcgaa aacgacatct gcatcgcctc
     3721 gtcgtagtcg tcgtgctcgc tttgatggat gatcgcgacc aagagattgt cggcatcgag
     3781 ctggagccga tcgagcgcct ccagggaggg cgcggcgtgc gccttgcgca cgagttcgat
     3841 gaggcgctgc aggagccgca gccgccgcgt gcggccgctc ctgtggaaat agccggcgac
     3901 cccggcaatc gccgagccaa agatgggaaa gatcagcaag ccgtagaaga tg
//
